BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003439
         (820 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score = 1268 bits (3280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/817 (73%), Positives = 693/817 (84%), Gaps = 1/817 (0%)

Query: 4   LAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV 63
           LAP+ K R   K LP  +    LFSAA +S Q S   L N++ EIDF+ LF S TK    
Sbjct: 76  LAPTLKSRYTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFA 135

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHALLVV+GK++++F ST+LVN YANLGD+S SR TFD I  ++VY WNSMIS YV  
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 195

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G   EA+ CFYQ  L S +RPDFYTFPPVLKAC  LVDG+KIHC   KLGF+W+VFVAAS
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAAS 255

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+HMY RFG   +AR LFDDMP RD GSWNAMISG  Q+GNA +ALD+LDEMRLEG+ M+
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            +TV SILPVC +  +I + +LIHLY++KHGLEF+LFVSN LINMYAKFG +  A + F 
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           QM   DVVSWNSIIAAYEQ++DP+TAHGFF  MQ  G QPDLLTLVSL SIVAQ  DC+N
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
           SRSVHGFIMRRGW MEDV+IGNAVVDMYAKLG+++SA  VFE +PVKDVISWNTLITGYA
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYA 495

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           QNGLASEAIEV++MMEEC EI PNQGT+VSILPAY+HVGAL+QG+KIH RVIK  L  DV
Sbjct: 496 QNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDV 555

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           FVATCL+D+YGKCGR+ DAMSLFYQVP+ SSV WNAIISCHGIHG  +K L  F +MLDE
Sbjct: 556 FVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           GV+PDH+TFVSLL+ACSHSG V EG+  F +MQ E+GIKP LKHYGCMVDL GRAG+L M
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEM 674

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           A++FI++MP++PDASIWGALLGACRIHGN+ELG  ASDRLFEVDS+NVGYYVL+SNIYAN
Sbjct: 675 AYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYAN 734

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
           VGKWEGVD+VRSLAR+RGLKKTPGWS+IEVN KVD+FYTGN++HPK ++IY+ELR LTAK
Sbjct: 735 VGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAK 794

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           MKSLGY+PD SFVLQDVEEDEKEHILTSHSERLAIAFGIIS+PPKSPI+IFKNLRVCGDC
Sbjct: 795 MKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDC 854

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           HN TKFIS+IT+REI+VRDSNRFHHFKDGICSCGDYW
Sbjct: 855 HNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score = 1264 bits (3270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/817 (73%), Positives = 692/817 (84%), Gaps = 1/817 (0%)

Query: 4   LAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV 63
           LAP+ K R   K LP  +    LFSAA +S Q S   L N++ EIDF+ LF S TK    
Sbjct: 76  LAPTLKSRHTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFA 135

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHALLVV+GK++++F ST+LVN YANLGD+S SR TFD I  ++VYTWNSMIS YV  
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G   EA+ CFYQ  L S +RPDFYTFPPVLKAC  LVDG++IHC   KLGF+W+VFVAAS
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAAS 255

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+HMY RFG   +AR LFDDMP RD GSWNAMISG  Q+GNA +ALD+LDEMRLEG+ M+
Sbjct: 256 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMN 315

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            +TV SILPVC +  +I + +LIHLY++KHGLEF+LFVSN LINMYAKFG +  A + F 
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           QM   DVVSWNSIIAAYEQ++DP+TAHGFF  MQ  G QPDLLTLVSL SIVAQ  DC+N
Sbjct: 376 QMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKN 435

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
           SRSVHGFIMRRGW MEDV+IGNAVVDMYAKLG+++SA  VFE + VKDVISWNTLITGYA
Sbjct: 436 SRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYA 495

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           QNGLASEAIEV++MMEEC EI PNQGT+VSILPAY+HVGAL+QG++IH RVIK  L  DV
Sbjct: 496 QNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDV 555

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           FVATCL+D+YGKCGR+ DAMSLFYQVP+ SSV WNAIISCHGIHG  +K L  F +MLDE
Sbjct: 556 FVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           GV+PDH+TFVSLL+ACSHSG V EG+  F +MQ E+GIKP LKHYGCMVDL GRAG+L M
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEM 674

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           A+ FI++MP++PDASIWGALLGACRIHGN+ELG  ASDRLFEVDS+NVGYYVL+SNIYAN
Sbjct: 675 AYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYAN 734

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
           VGKWEGVD+VRSLAR+RGLKKTPGWS+IEVN KVD+FYTGN++HPK ++IY+ELR LTAK
Sbjct: 735 VGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAK 794

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           MKSLGY+PD SFVLQDVEEDEKEHILTSHSERLAIAFGIIS+PPKSPI+IFKNLRVCGDC
Sbjct: 795 MKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDC 854

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           HN TKFIS+IT+REI+VRDSNRFHHFKDGICSCGDYW
Sbjct: 855 HNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score = 1238 bits (3204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/777 (75%), Positives = 669/777 (86%), Gaps = 1/777 (0%)

Query: 44  ESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           ++ EIDF+ LF SCTK    KRLHALLVVSGKI++ F S +LVN YA+LGD+S SR TFD
Sbjct: 73  KNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFD 132

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            I  ++VYTWNSMIS YVR G   EA+DCFYQ  L +  + DFYTFPPVLKAC+ LVDG+
Sbjct: 133 QIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGR 192

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           KIHC V KLGF+WDVFVAASL+HMY RFG   +AR LFDDMP RD GSWNAMISG  Q+G
Sbjct: 193 KIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNG 252

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           NA +ALD+LDEMRLEG++MD +TVASILPVCA+  +I +  LIHLY++KHGLEF LFVSN
Sbjct: 253 NAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSN 312

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LINMYAKFG +  A +VF QM  RDVVSWNSIIAAYEQ++DP+TA GFF  MQ  G++P
Sbjct: 313 ALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP 372

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           DLLTLVSL SI AQ  D +NSRSVHGFIMRRGW ME V+IGNAV+DMYAKLG+I+SA  V
Sbjct: 373 DLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKV 432

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +PVKDV+SWNTLI+GY QNGLASEAIEV++MMEEC EI  NQGT+VSIL AY+HVGA
Sbjct: 433 FNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGA 492

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L+QG++IH  +IK  L  DVFV TCL+D+YGKCGR+ DAM LFYQVPR SSVPWNAIISC
Sbjct: 493 LQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISC 552

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           HGIHG G+KAL  FR+M DEGV+PDH+TF+SLL+ACSHSGLV EG+ +FH+MQ E+GIKP
Sbjct: 553 HGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKP 611

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            LKHYGCMVDL GRAG L MA++FI++MP+ PDASIWGALLGACRIHGN+ELG  ASDRL
Sbjct: 612 SLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRL 671

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
           FEVDSENVGYYVL+SNIYANVGKWEGVD+VRSLAR+RGLKKTPGWSSIEVN +VDIFYTG
Sbjct: 672 FEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTG 731

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           N++HPK ++IY ELR LTAKMKSLGY+PD SFVLQDVEEDEKEHILTSHSERLAIAFGII
Sbjct: 732 NQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII 791

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+PPKS I+IFKNLRVCGDCHN TKFIS+ITEREI+VRDS RFHHFK+GICSCGDYW
Sbjct: 792 STPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score = 1143 bits (2957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/813 (66%), Positives = 659/813 (81%), Gaps = 3/813 (0%)

Query: 8   CKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLH 67
           CK RR+    P  QA   L+SA A    +  D +ENE REIDF+ +F  CTK+H  K+LH
Sbjct: 7   CKWRRVSLFKPSFQAC-SLYSATAAPKYL--DGVENEKREIDFNRIFLYCTKVHLAKQLH 63

Query: 68  ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           ALLVVSGK +++F S KL+N YA LGD+  +R TFD I  ++VYTWNSMIS Y R G   
Sbjct: 64  ALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFH 123

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHM 187
            AVDCF +F  TS L+ D YTFPPV++AC NL DG+K+HC VLKLGFE DV++AAS +H 
Sbjct: 124 AAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHF 183

Query: 188 YCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 247
           Y RFG  ++A  LFD+M +RD G+WNAMISG+  +G   EAL++ DEMR + VSMD +T+
Sbjct: 184 YSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTI 243

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           +S+LP+C + D+I+SG+LIH+Y +K GLEF+LFV N LINMYAKFG +R A  +F+QM  
Sbjct: 244 SSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKV 303

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           RD+VSWNS++AA+EQ+  P+ A G +  M   G+ PDLLTLVSL S+ A+L +  +SRS+
Sbjct: 304 RDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSI 363

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HGF+ RR WF+ D+ +GNA++DMYAKLG I+SA  VFEGLPVKDVISWN+LITGY+QNGL
Sbjct: 364 HGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGL 423

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
           A+EAI+V+  M   +   PNQGT+VSIL A+S +GAL+QG+K H ++IKN L FD+FV+T
Sbjct: 424 ANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVST 483

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
           CLVDMYGKCG++ DA+SLFY+VP  SSV WNAIISCHG+HG G KA+  F++M  EGV+P
Sbjct: 484 CLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKP 543

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           DHITFVSLL+ACSHSGLV EGQ  F +MQE +GI+P LKHYGCMVDLFGRAGHL  A NF
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNF 603

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           ++NMPVRPD S+WGALLGACRIH N+EL    SD L +V+SENVGYYVL+SNIYA +G W
Sbjct: 604 VKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHW 663

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           EGVDEVRSLARDRGLKKTPGWSSIEV+ K+D+FYTGN+THPK E+IY ELRNLTAKMKS+
Sbjct: 664 EGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSI 723

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GYVPD +FVLQDVE+DEKE+ILTSHSERLA+AFGIIS+PPK+ +QIFKNLRVCGDCHN T
Sbjct: 724 GYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNAT 783

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KFIS+ITEREIIVRDSNRFHHFKDG+CSCGDYW
Sbjct: 784 KFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score = 1142 bits (2955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/805 (66%), Positives = 664/805 (82%), Gaps = 13/805 (1%)

Query: 16  LLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGK 75
           +L LL++    + +A  SL           ++ DF+ LF SC  ++  K+LHALL+V GK
Sbjct: 1   MLSLLKSVSKFYKSATTSLH----------KDADFNALFNSCVNVNATKKLHALLLVFGK 50

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
            + +  STKL+N Y   GD+S SR TFD+I  +N+++WNS+IS YVR G+  EA++C  Q
Sbjct: 51  SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110

Query: 136 -FTLTSG--LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            F++  G  LRPDFYTFPP+LKAC +LVDGKK+HC V K+GFE DVFVAASL+H+Y R+G
Sbjct: 111 LFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           + +VA K+F DMPV+D GSWNAMISG+CQ+GNA  AL +L+ M+ EGV MD ITVASILP
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           VCA+SD++++G+LIHL+++KHGL+ ++FVSN LINMY+KFG ++ A  VFDQM  RD+VS
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WNSIIAAYEQ+NDP TA  FF  MQ  GI+PDLLT+VSLTSI +QL+D R SRS+ GF++
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           RR W  +DV+IGNA+V+MYAKLG +N A  VF+ LP KD ISWNTL+TGY QNGLASEAI
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           + + MMEEC +  PNQGT+VSI+PAYSHVGAL+QG+KIHA++IKN L  DVFVATCL+D+
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDL 470

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           YGKCGR++DAMSLFY++PR +SVPWNAII+  GIHG+G++AL  F+ ML E V+ DHITF
Sbjct: 471 YGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           VSLL+ACSHSGLV EGQ+ F +MQ+E+GIKP LKHYGCMVDL GRAG+L  A+  ++NMP
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           ++PDASIWGALL AC+I+GN ELG +ASDRL EVDSENVGYYVL+SNIYAN  KWEGV +
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           VRSLARDRGL+KTPGWSS+ V +K ++FYTGN+THPKY +IY EL+ L+AKMKSLGYVPD
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPD 710

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            SFV QD+EEDEKE IL SHSERLAIAFGIIS+PP+SPI+IFKNLRVCGDCHN TK+IS+
Sbjct: 711 YSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISR 770

Query: 793 ITEREIIVRDSNRFHHFKDGICSCG 817
           I+EREI+VRDSNRFHHFKDGICSC 
Sbjct: 771 ISEREIVVRDSNRFHHFKDGICSCA 795


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score = 1133 bits (2931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/801 (66%), Positives = 661/801 (82%), Gaps = 13/801 (1%)

Query: 16  LLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGK 75
           +L LL++    + +A  SL           ++ DF+ LF SC  ++  K+LHALL+V GK
Sbjct: 1   MLSLLKSVSKFYKSATTSLH----------KDADFNALFNSCVNVNATKKLHALLLVFGK 50

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
            + +  STKL+N Y   GD+S SR TFD+I  +N+++WNS+IS YVR G+  EA++C  Q
Sbjct: 51  SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110

Query: 136 -FTLTSG--LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            F++  G  LRPDFYTFPP+LKAC +LVDGKK+HC V K+GFE DVFVAASL+H+Y R+G
Sbjct: 111 LFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           + +VA K+F DMPV+D GSWNAMISG+CQ+GNA  AL +L+ M+ EGV MD ITVASILP
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           VCA+SD++++G+LIHL+++KHGL+ ++FVSN LINMY+KFG ++ A  VFDQM  RD+VS
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WNSIIAAYEQ+NDP TA  FF  MQ  GI+PDLLT+VSLTSI +QL+D R SRS+ GF++
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           RR W  +DV+IGNA+V+MYAKLG +N A  VF+ LP KD ISWNTL+TGY QNGLASEAI
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           + + MMEEC +  PNQGT+VSI+PAYSHVGAL+QG+KIHA++IKN L  DVFVATCL+D+
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDL 470

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           YGKCGR++DAMSLFY++PR +SVPWNAII+  GIHG+G++AL  F+ ML E V+ DHITF
Sbjct: 471 YGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           VSLL+ACSHSGLV EGQ+ F +MQ+E+GIKP LKHYGCMVDL GRAG+L  A+  ++NMP
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           ++PDASIWGALL AC+I+GN ELG +ASDRL EVDSENVGYYVL+SNIYAN  KWEGV +
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           VRSLARDRGL+KTPGWSS+ V +K ++FYTGN+THPKY +IY EL+ L+AKMKSLGYVPD
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPD 710

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            SFV QD+EEDEKE IL SHSERLAIAFGIIS+PP+SPI+IFKNLRVCGDCHN TK+IS+
Sbjct: 711 YSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISR 770

Query: 793 ITEREIIVRDSNRFHHFKDGI 813
           I+EREI+VRDSNRFHHFKDGI
Sbjct: 771 ISEREIVVRDSNRFHHFKDGI 791


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score = 1128 bits (2917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/810 (67%), Positives = 662/810 (81%), Gaps = 7/810 (0%)

Query: 18  PLLQAHRP-LFSAAANSLQ--ISPD----CLENESREIDFDDLFQSCTKLHHVKRLHALL 70
           P+LQ  +P ++   ++SLQ  IS D      +N +  +DF+ +F+SCT ++  K+LHALL
Sbjct: 15  PILQLQQPCIYHFFSSSLQHKISHDPDNKNNKNNNVVVDFNLVFRSCTNINVAKQLHALL 74

Query: 71  VVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAV 130
           +V GK + V   T+LV  YA LGDLS S  TF HI  +N+++WNSM+S YVR GR  +++
Sbjct: 75  LVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSM 134

Query: 131 DCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           DC  +    SG+RPDFYTFPPVLKAC +L DG+K+HC VLK+GFE DV+VAASL+H+Y R
Sbjct: 135 DCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSR 194

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
           FG   VA K+F DMPVRD GSWNAMISG+CQ+GN  EAL +LD M+ E V MD +TV+S+
Sbjct: 195 FGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSM 254

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           LP+CA+S++++ G+L+HLY++KHGLE ++FVSN LINMY+KFG ++ A RVFD M  RD+
Sbjct: 255 LPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDL 314

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSWNSIIAAYEQ++DP+TA GFF  M   G++PDLLT+VSL SI  QL+D R  R+VHGF
Sbjct: 315 VSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGF 374

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           ++R  W   D++IGNA+V+MYAKLG I+ A AVFE LP +DVISWNTLITGYAQNGLASE
Sbjct: 375 VVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASE 434

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           AI+ + MMEE   I PNQGT+VSILPAYSHVGAL+QG+KIH R+IKNCL  DVFVATCL+
Sbjct: 435 AIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLI 494

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMYGKCGR++DAMSLFY++P+ +SVPWNAIIS  GIHG G+KAL  F+ M  +GV+ DHI
Sbjct: 495 DMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHI 554

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TFVSLL+ACSHSGLV E Q  F  MQ+E+ IKP+LKHYGCMVDLFGRAG+L  A+N + N
Sbjct: 555 TFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSN 614

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP++ DASIWG LL ACRIHGN ELG  ASDRL EVDSENVGYYVL+SNIYANVGKWEG 
Sbjct: 615 MPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGA 674

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            +VRSLARDRGL+KTPGWSS+ V + V++FY GN++HP+  +IY+ELR L AKMKSLGYV
Sbjct: 675 VKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYV 734

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           PD SFVLQDVEEDEKE ILTSHSERLAI FGIIS+PPKSPI+IFKNLRVCGDCHN TK+I
Sbjct: 735 PDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYI 794

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+ITEREIIVRDSNRFHHFKDGICSCGDYW
Sbjct: 795 SKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score = 1085 bits (2806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/824 (62%), Positives = 645/824 (78%), Gaps = 11/824 (1%)

Query: 1   MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLEN--ESREID-FDDLFQSC 57
           +FR  P+CK  R  ++L  + A    FSA+AN+LQ   DC +N  ES+EID    LF+ C
Sbjct: 8   LFRQVPTCKGGRFTRVLQSVGAVVREFSASANALQ---DCWKNGNESKEIDDVHTLFRYC 64

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           T L   K LHA LVVS  I+ V  S KLVN Y  LG+++ +R+TFDHI  R+VY WN MI
Sbjct: 65  TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWD 177
           S Y R G  SE + CF  F L+SGL+PD+ TFP VLKACRN+ DG KIHC  LK GF WD
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFMWD 184

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
           V+VAASL+H+YCR+G    AR LFD+MP RD GSWNAMISGYCQSGNA EAL + D +R 
Sbjct: 185 VYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR- 243

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
              +MD +TV S+L  C  + +   G+ IH Y +KHGLE  LFVSN LI++YA+FG ++ 
Sbjct: 244 ---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKD 300

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
             +VFD+M  RD++SWNSII AYE +  P+ A   F  M+ + IQPD LTL+SL SI++Q
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQ 360

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L + R  RSV GF +R+GWF+ED+ IGNAVV MYAKLG+++SA AVF  LP KDVISWNT
Sbjct: 361 LGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNT 420

Query: 418 LITGYAQNGLASEAIEVFQMMEE-CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           +I+GYAQNG ASEAIE++ +MEE   EI+ NQGT+VS+LPA S  GALRQG+K+H R++K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLK 480

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
           N L  DVFV T L DMYGKCGR+DDA+SLFYQ+PR +SVPWN +I+CHG HG G+KA+  
Sbjct: 481 NGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 540

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F++MLDEGV+PDHITFV+LL+ACSHSGLV EG+  F MMQ ++GI P LKHYGCMVDL+G
Sbjct: 541 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYG 600

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG L +A NFI++MP++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+VL
Sbjct: 601 RAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 660

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SN+YA+ GKWEGVDE+RS+   +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y E
Sbjct: 661 LSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 720

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  L  K+K +GYVPD  FVLQDVE+DEKEHIL SHSERLA+AF +I++P K+ I+IFKN
Sbjct: 721 LTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKN 780

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW
Sbjct: 781 LRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/821 (62%), Positives = 639/821 (77%), Gaps = 10/821 (1%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLEN--ESREID-FDDLFQSCTK 59
           R  P+CK  R  ++L  + +    FSA+AN+LQ   DC +N  ES+EID    LF+ CT 
Sbjct: 10  RQIPTCKGGRFTRVLQSIGSVIREFSASANALQ---DCWKNGNESKEIDDVHTLFRYCTN 66

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LHA LVVS +I+ V  S KLVN Y  LG+++ +RHTFDHI  R+VY WN MIS 
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVF 179
           Y R G  SE + CF  F L+SGL PD+ TFP VLKACR ++DG KIHC  LK GF WDV+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVY 186

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           VAASL+H+Y R+     AR LFD+MPVRD GSWNAMISGYCQSGNA EAL + + +R   
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR--- 243

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
            +MD +TV S+L  C  + +   G+ IH Y +KHGLE  LFVSN LI++YA+FG +R   
Sbjct: 244 -AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VFD+M  RD++SWNSII AYE +  P+ A   F  M+ + IQPD LTL+SL SI++QL 
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           D R  RSV GF +R+GWF+ED+ IGNAVV MYAKLG+++SA AVF  LP  DVISWNT+I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           +GYAQNG ASEAIE++ +MEE  EI  NQGT+VS+LPA S  GALRQG+K+H R++KN L
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN +I+CHG HG G+KA+  F++
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           MLDEGV+PDHITFV+LL+ACSHSGLV EGQ  F MMQ ++GI P LKHYGCMVD++GRAG
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            L  A  FI++M ++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+VL+SN
Sbjct: 603 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 662

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           +YA+ GKWEGVDE+RS+A  +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y EL  
Sbjct: 663 MYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTA 722

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           L AK+K +GYVPD  FVLQDVE+DEKEHIL SHSERLAIAF +I++P K+ I+IFKNLRV
Sbjct: 723 LQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRV 782

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW
Sbjct: 783 CGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/679 (62%), Positives = 524/679 (77%), Gaps = 19/679 (2%)

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
           HTFDHI  R+VY WN MIS Y R G  SE + CF  F L+SGL PD+ TFP VLKACR +
Sbjct: 40  HTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV 99

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           +DG KIHC  LK GF WDV+VAASL+H+Y R+     AR LFD+MPVRD GSWNAMISGY
Sbjct: 100 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 159

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           CQSGNA EAL + + +R    +MD +TV S+L  C  + +   G+ IH Y +KHGLE  L
Sbjct: 160 CQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 215

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
                          +R   +VFD+M  RD++SWNSII AYE +  P+ A   F  M+ +
Sbjct: 216 ---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 260

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            IQPD LTL+SL SI++QL D R  RSV GF +R+GWF+ED+ IGNAVV MYAKLG+++S
Sbjct: 261 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 320

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A AVF  LP  DVISWNT+I+GYAQNG ASEAIE++ +MEE  EI  NQGT+VS+LPA S
Sbjct: 321 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 380

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
             GALRQG+K+H R++KN L  DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN 
Sbjct: 381 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 440

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+CHG HG G+KA+  F++MLDEGV+PDHITFV+LL+ACSHSGLV EGQ  F MMQ ++
Sbjct: 441 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDY 500

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P LKHYGCMVD++GRAG L  A  FI++M ++PDASIWGALL ACR+HGN++LG +A
Sbjct: 501 GITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA 560

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           S+ LFEV+ E+VGY+VL+SN+YA+ GKWEGVDE+RS+A  +GL+KTPGWSS+EV+NKV++
Sbjct: 561 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEV 620

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           FYTGN+THP YE++Y EL  L AK+K +GYVPD  FVLQDVE+DEKEHIL SHSERLAIA
Sbjct: 621 FYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIA 680

Query: 760 FGIISSPPKSPIQIFKNLR 778
           F +I++P K+ I+IFKNLR
Sbjct: 681 FALIATPAKTTIRIFKNLR 699



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 263/539 (48%), Gaps = 57/539 (10%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  + ++C  +    ++H L +  G +  V+ +  L++ Y+    +  +R  FD +  R+
Sbjct: 89  FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 148

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP-DFYTFPPVLKACRNLVD---GKKI 165
           + +WN+MIS Y + G   EA+      TL++GLR  D  T   +L AC    D   G  I
Sbjct: 149 MGSWNAMISGYCQSGNAKEAL------TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTI 202

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K G E +               L    +K+FD M VRD  SWN++I  Y  +   
Sbjct: 203 HSYSIKHGLESE---------------LLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 247

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG--LEFNLFVSN 283
           + A+ +  EMRL  +  D +T+ S+  + ++  +I +   +  + ++ G  LE ++ + N
Sbjct: 248 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGN 306

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQ 342
            ++ MYAK G++  A  VF+ +   DV+SWN+II+ Y Q+     A   +  M++ G I 
Sbjct: 307 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 366

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            +  T VS+    +Q    R    +HG +++ G ++ DV +  ++ DMY K G +  A +
Sbjct: 367 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALS 425

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 461
           +F  +P  + + WNTLI  +  +G   +A+ +F +M++E   + P+  T+V++L A SH 
Sbjct: 426 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG--VKPDHITFVTLLSACSHS 483

Query: 462 GALRQGIKIHARVIKNCLCFDVFVAT-----------CLVDMYGKCGRIDDAMSLFYQVP 510
           G + +G            CF++               C+VDMYG+ G+++ A+     + 
Sbjct: 484 GLVDEG----------QWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS 533

Query: 511 -RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
            +  +  W A++S   +HG  D        + +  V P+H+ +  LL+    S    EG
Sbjct: 534 LQPDASIWGALLSACRVHGNVDLGKIASEHLFE--VEPEHVGYHVLLSNMYASAGKWEG 590



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 145/300 (48%), Gaps = 31/300 (10%)

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS-NDP 326
           L +  H  +  L  +   ++ +      +  +  FD +  RDV +WN +I+ Y ++ N  
Sbjct: 8   LMMFTHFSDIALICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSS 67

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR---NSRSVHGFIMRRGWFMEDVII 383
                F   M  +G+ PD  T  S+      L  CR   +   +H   ++ G FM DV +
Sbjct: 68  EVIRCFSLFMLSSGLTPDYRTFPSV------LKACRTVIDGNKIHCLALKFG-FMWDVYV 120

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
             +++ +Y++   + +A  +F+ +PV+D+ SWN +I+GY Q+G A EA+ +   +   + 
Sbjct: 121 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS 180

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           +     T VS+L A +  G   +G+ IH+  IK+ L  ++               + D  
Sbjct: 181 V-----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL---------------LRDCQ 220

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F ++     + WN+II  + ++ Q  +A++ F++M    ++PD +T +SL +  S  G
Sbjct: 221 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 280


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/679 (58%), Positives = 515/679 (75%), Gaps = 3/679 (0%)

Query: 145 DFYTFPPVLKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDD 203
           D +TFPP+L+A +      ++H   L+LG    D F + +L+H Y RFG    A + FD+
Sbjct: 70  DAFTFPPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDE 129

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M  RD  +WNAM+SG C++  A EA+ +   M +EGV+ D +TV+S+LP+C    +    
Sbjct: 130 MRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALA 189

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           L +HLY VKHGL+  LFV N +I++Y K GM+    +VFD M  RD+V+WNSII+ +EQ 
Sbjct: 190 LAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQG 249

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
               +A   F  M+ +G+ PD+LTL+SL S +AQ  D    RSVH +++RRGW + D+I 
Sbjct: 250 GQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           GNA+VDMYAKL  I +A  +F+ +PV+D +SWNTLITGY QNGLASEAI V+  M++   
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG 369

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + P QGT+VS+LPAYSH+GAL+QG ++HA  IK  L  DV+V TC++D+Y KCG++D+AM
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAM 429

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            LF Q PR S+ PWNA+IS  G+HG G KAL+ F QM  EG+ PDH+TFVSLL ACSH+G
Sbjct: 430 LLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAG 489

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV +G+ +F+MMQ  +GIKP  KHY CMVD+FGRAG L  A +FI+NMP++PD++IWGAL
Sbjct: 490 LVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL 549

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           LGACRIHGN+E+G VAS  LFE+D +NVGYYVLMSN+YA VGKW+GVDEVRSL R + L+
Sbjct: 550 LGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQ 609

Query: 684 KTPGWSSIEVNNKVDIFYTGNR--THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           KTPGWSSIEV   V++FY+GN+   HP++E+I  EL +L AK++SLGYVPD SFVLQDVE
Sbjct: 610 KTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVE 669

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           EDEKE IL +HSERLAIAFGII++PP++P+ I+KNLRVCGDCHN TK+IS+ITEREIIVR
Sbjct: 670 EDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVR 729

Query: 802 DSNRFHHFKDGICSCGDYW 820
           DSNRFHHFKDG CSCGD+W
Sbjct: 730 DSNRFHHFKDGYCSCGDFW 748



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 251/488 (51%), Gaps = 13/488 (2%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           F  L ++        +LHA  +  G ++   F+S  LV+ Y   G +  +   FD + +R
Sbjct: 74  FPPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHR 133

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           +V  WN+M+S   R  R +EAV  F +  +  G+  D  T   VL  C  L D      +
Sbjct: 134 DVPAWNAMLSGLCRNARAAEAVGLFGRMVM-EGVAGDAVTVSSVLPMCVLLGDRALALAM 192

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K G + ++FV  +++ +Y + G+    RK+FD M  RD  +WN++ISG+ Q G  
Sbjct: 193 HLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQV 252

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNN 284
             A+++   MR  GVS D +T+ S+    A+  +I  G  +H Y+V+ G +  ++   N 
Sbjct: 253 ASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNA 312

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQP 343
           +++MYAK   +  A R+FD M  RD VSWN++I  Y Q+     A   +  MQ+  G++P
Sbjct: 313 IVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKP 372

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              T VS+    + L   +    +H   ++ G  + DV +G  V+D+YAK G ++ A  +
Sbjct: 373 IQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL-DVYVGTCVIDLYAKCGKLDEAMLL 431

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE  P +    WN +I+G   +G  ++A+ +F  M++   I+P+  T+VS+L A SH G 
Sbjct: 432 FEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQ-EGISPDHVTFVSLLAACSHAGL 490

Query: 464 LRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
           + QG      +++             C+VDM+G+ G++DDA      +P +  S  W A+
Sbjct: 491 VDQGRNFF-NMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL 549

Query: 521 ISCHGIHG 528
           +    IHG
Sbjct: 550 LGACRIHG 557



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 208/406 (51%), Gaps = 15/406 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H   V  G    +F    +++ Y  LG L   R  FD +S R++ TWNS+IS + + G+
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFE-WDVFVA 181
           ++ AV+ F      SG+ PD  T   +  A   C ++  G+ +HC +++ G++  D+   
Sbjct: 252 VASAVEMFCGMR-DSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG 310

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGV 240
            +++ MY +      A+++FD MPVRD+ SWN +I+GY Q+G A EA+ + D M + EG+
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGL 370

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                T  S+LP  +    +  G  +H   +K GL  +++V   +I++YAK G +  A+ 
Sbjct: 371 KPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAML 430

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F+Q   R    WN++I+          A   F+ MQQ GI PD +T VSL +  +    
Sbjct: 431 LFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGL 490

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
               R+    +M+  + ++ +    A +VDM+ + G ++ A      +P+K D   W  L
Sbjct: 491 VDQGRNFFN-MMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL 549

Query: 419 ITGYAQNGLASEAIEVFQMMEE-CNEINP-NQGTYVSILPAYSHVG 462
           +     +G     +E+ ++  +   E++P N G YV +   Y+ VG
Sbjct: 550 LGACRIHG----NVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVG 591



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 139/290 (47%), Gaps = 10/290 (3%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGD 94
           +SPD L      +        C  +   + +H  +V  G  +  + +   +V+ YA L  
Sbjct: 267 VSPDVLT----LLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSK 322

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +  ++  FD +  R+  +WN++I+ Y++ G  SEA+  +       GL+P   TF  VL 
Sbjct: 323 IEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLP 382

Query: 155 ACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           A  +   L  G ++H   +K G   DV+V   ++ +Y + G  + A  LF+  P R +G 
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP 442

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYI 270
           WNA+ISG    G+  +AL +  +M+ EG+S D +T  S+L  C+ +  +  G    ++  
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQ 502

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             +G++        +++M+ + G +  A      M ++ D   W +++ A
Sbjct: 503 TAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGA 552


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/717 (55%), Positives = 528/717 (73%), Gaps = 16/717 (2%)

Query: 114 NSMISVYVRCGR-------LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
           N++I+ + R          L   + C Y F      RPD +TFP +++A  +     ++H
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPF------RPDGFTFPSLIRAAPSNASAAQLH 90

Query: 167 CSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
              L+LG     VF + SL+H Y RFG  + A K+FD+M  RD  +WNAM+SG C++  A
Sbjct: 91  ACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARA 150

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA+ +   M  EGV+ D +TV+S+LP+C    + +  L++H+Y VKHGL+  LFV N L
Sbjct: 151 AEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNAL 210

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I++Y K GM+  A  VF  M  RD+V+WNSII+  EQ      A   F  M+ +G+ PD+
Sbjct: 211 IDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDV 270

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           LTLVSL S +AQ  D R+++S+H ++MRRGW ++D+I GNA+VDMYAKL  I +A  +F+
Sbjct: 271 LTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFD 330

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +PV+D +SWNTLITGY QNGLA+EA+E +  M++   +   QGT+VS+LPAYSH+GAL+
Sbjct: 331 SMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQ 390

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           QG+++HA  IK  L  DV+V TCL+D+Y KCG++ +AM LF ++PR S+ PWNAIIS  G
Sbjct: 391 QGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLG 450

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           +HG G +AL  F +M  EG++PDH+TFVSLL ACSH+GLV +G+ +F +MQ  + I P  
Sbjct: 451 VHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIA 510

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           KHY CM D+ GRAG L  A NFIQNMP++PD+++WGALLGACRIHGN+E+G VAS  LFE
Sbjct: 511 KHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFE 570

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +D ENVGYYVLMSN+YA VGKW+GVDEVRSL R + L+KTPGWSSIEV   V++FY+GN+
Sbjct: 571 LDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQ 630

Query: 706 T--HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           T  HP++E+I  ELR+L AK++S+GYV D SFVLQDVE+DEKEHIL +HSERLAIAFGII
Sbjct: 631 TEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGII 690

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++P ++P+ I+KNLRVCGDCHN TK+ISQITEREIIVRDSNRFHHFKDG CSCGD+W
Sbjct: 691 NTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/499 (30%), Positives = 249/499 (49%), Gaps = 35/499 (7%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           F  L ++        +LHA  +  G ++ +VF+S  LV+ Y   G +S +   FD +S R
Sbjct: 73  FPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSER 132

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           +V  WN+M+S   R  R +EAV  F +  +  G+  D  T   VL  C  L D      +
Sbjct: 133 DVPAWNAMLSGLCRNARAAEAVGLFGRM-VGEGVAGDTVTVSSVLPMCVLLGDQVLALVM 191

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K G + ++FV  +L+ +Y + G+   A+ +F  M  RD  +WN++ISG  Q G  
Sbjct: 192 HVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQT 251

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNN 284
             AL +   MR  GVS D +T+ S+    A+  +  S   +H Y+++ G +  ++   N 
Sbjct: 252 AAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNA 311

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ---SNDPITAHGFFTTMQQAGI 341
           +++MYAK   +  A R+FD M  +D VSWN++I  Y Q   +N+ +  +G     +  G+
Sbjct: 312 IVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ--KHEGL 369

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +    T VS+    + L   +    +H   ++ G  + DV +G  ++D+YAK G +  A 
Sbjct: 370 KAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNV-DVYVGTCLIDLYAKCGKLAEAM 428

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +FE +P +    WN +I+G   +G  +EA+ +F  M++   I P+  T+VS+L A SH 
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQ-EGIKPDHVTFVSLLAACSHA 487

Query: 462 GALRQGIKIHARVIKNCLCFDVFVAT-----------CLVDMYGKCGRIDDAMSLFYQVP 510
           G + QG             FDV   T           C+ DM G+ G++D+A +    +P
Sbjct: 488 GLVDQGRSF----------FDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP 537

Query: 511 -RSSSVPWNAIISCHGIHG 528
            +  S  W A++    IHG
Sbjct: 538 IKPDSAVWGALLGACRIHG 556


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/660 (61%), Positives = 504/660 (76%), Gaps = 37/660 (5%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            K +H  ++  G    +F++  L+++Y   G  +++R  FD +P +D  +WN+MIS Y  
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 222 SGNAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           +G+  EA+    ++ L   +  D  T   +L  C     ++ G  IH +  K G ++N+F
Sbjct: 95  NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVF 151

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V+ +LI+MY++FG    A  +FD M  RD+ SWN++I+   Q+ +   A      M+  G
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I+ + +T+VS+  +                                 VDMYAKLG+++SA
Sbjct: 212 IKMNFVTVVSILPVF--------------------------------VDMYAKLGLLDSA 239

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE +PVKDVISWNTLITGYAQNGLASEAIEV++MMEEC EI PNQGT+VSILPAY+H
Sbjct: 240 HKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 299

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           VGAL+QG+KIH RVIK  L  DVFVATCL+D+YGKCGR+ DAMSLFYQVP+ SSV WNAI
Sbjct: 300 VGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAI 359

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           ISCHGIHG  +K L  F +MLDEGV+PDH+TFVSLL+ACSHSG V EG+  F +MQE +G
Sbjct: 360 ISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YG 418

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           IKP LKHYGCMVDL GRAG+L MA++FI++MP++PDASIWGALLGACRIHGN+ELG  AS
Sbjct: 419 IKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 478

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           DRLFEVDS+NVGYYVL+SNIYANVGKWEGVD+VRSLAR+RGLKKTPGWS+IEVN KVD+F
Sbjct: 479 DRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVF 538

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
           YTGN++HPK ++IY+ELR LTAKMKSLGY+PD SFVLQDVEEDEKEHILTSHSERLAIAF
Sbjct: 539 YTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAF 598

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GIIS+PPKSPI+IFKNLRVCGDCHN TKFIS+IT+REI+VRDSNRFHHFKDGICSCGDYW
Sbjct: 599 GIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/499 (41%), Positives = 300/499 (60%), Gaps = 37/499 (7%)

Query: 33  SLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL 92
           S + S   L N++ EIDF+ LF S TK    K LHALLVV+GK++++F ST+LVN YANL
Sbjct: 5   SKKFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANL 64

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GD+S SR TFD I  ++VY WNSMIS YV  G   EA+ CFYQ  L S +RPDFYTFPPV
Sbjct: 65  GDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPV 124

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           LKAC  LVDG+KIHC   KLGF+W+VFVAASL+HMY RFG   +AR LFDDMP RD GSW
Sbjct: 125 LKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSW 184

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NAMISG  Q+GNA +ALD+LDEMRLEG+ M+ +TV SILPV                   
Sbjct: 185 NAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV------------------- 225

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                        ++MYAK G++  A +VF+ +  +DV+SWN++I  Y Q+     A   
Sbjct: 226 ------------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEV 273

Query: 333 FTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           +  M++   I P+  T VS+    A +   +    +HG +++    + DV +   ++D+Y
Sbjct: 274 YKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL-DVFVATCLIDVY 332

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGT 450
            K G +  A ++F  +P +  ++WN +I+ +  +G A + +++F +M++E   + P+  T
Sbjct: 333 GKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE--GVKPDHVT 390

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           +VS+L A SH G + +G      + +  +   +    C+VD+ G+ G ++ A      +P
Sbjct: 391 FVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 450

Query: 511 -RSSSVPWNAIISCHGIHG 528
            +  +  W A++    IHG
Sbjct: 451 LQPDASIWGALLGACRIHG 469


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/682 (56%), Positives = 507/682 (74%), Gaps = 3/682 (0%)

Query: 142 LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKL 200
           LRPD +TFPP+++A        ++H   L+LG    +VF + SL+H Y RFG    A ++
Sbjct: 65  LRPDSFTFPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FD+MP RD  +WNAM+SG C++  A +A+ +L  M  EGV+ D +T++S+LP+C    + 
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDR 184

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
              L++H+Y VKHGL   LFV N LI++Y K GM+  A  VF  M  RD+V+WNSII+A 
Sbjct: 185 ALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISAN 244

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
           EQ      A   F  M ++G+ PD+LTLVSL S VAQ  D   ++SVH ++ RRGW + D
Sbjct: 245 EQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGD 304

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +I GNA+VDMYAK+  I++A  VF+ LP +DV+SWNTLITGY QNGLA+EAI ++  M  
Sbjct: 305 IIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHN 364

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              + P QGT+VS+LPAYS++G L+QG+++HA  IK  L  DV+V TCL+D+Y KCG++ 
Sbjct: 365 HEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLV 424

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +AM LF  +PR S+ PWNAII+  G+HG G KAL+ F QM  E ++PDH+TFVSLL ACS
Sbjct: 425 EAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACS 484

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H+GLV +G+ +F +MQ  +GI P  KHY CMVD+ GRAG L  A  FIQ+MP++PD+++W
Sbjct: 485 HAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVW 544

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           GALLGACRIHGN+E+G VAS  LFE+D ENVGYYVLMSN+YA +GKW+GVD VRSL R +
Sbjct: 545 GALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQ 604

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRT--HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            L+KTPGWSS+EV   V +FY+G +T  HP++E+I   L +L AKMKS GYVPD SFVLQ
Sbjct: 605 NLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQ 664

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           DVEEDEKE IL +HSERLAIAFGII++PP +P+ I+KNLRVCGDCH+ TK+IS+ITEREI
Sbjct: 665 DVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREI 724

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           IVRD+NRFHHFKDG CSCGD+W
Sbjct: 725 IVRDANRFHHFKDGHCSCGDFW 746



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 242/489 (49%), Gaps = 15/489 (3%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKI-KTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           F  L ++        +LHA  +  G +   VF+S  LV+ Y   G ++ +   FD +  R
Sbjct: 72  FPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPER 131

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           +V  WN+M+S   R  R ++AV    +  +  G+  D  T   VL  C  L D      +
Sbjct: 132 DVPAWNAMLSGLCRNTRAADAVTLLGRM-VGEGVAGDAVTLSSVLPMCVVLGDRALALVM 190

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K G   ++FV  +L+ +Y + G+   A  +F  M +RD  +WN++IS   Q G  
Sbjct: 191 HVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKV 250

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNN 284
             A+++   M   GV  D +T+ S+    A+  + L    +H Y+ + G +  ++   N 
Sbjct: 251 AAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNA 310

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQP 343
           +++MYAK   +  A +VFD + +RDVVSWN++I  Y Q+     A   +  M    G++P
Sbjct: 311 MVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKP 370

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              T VS+    + L   +    +H   ++ G  + DV +   ++D+YAK G +  A  +
Sbjct: 371 IQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL-DVYVTTCLIDLYAKCGKLVEAMFL 429

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +P +    WN +I G   +G  ++A+ +F  M++  EI P+  T+VS+L A SH G 
Sbjct: 430 FEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQ-EEIKPDHVTFVSLLAACSHAGL 488

Query: 464 LRQGIKIHARVIKNCLCFDVFVA---TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNA 519
           + QG       +   +   V +A   TC+VDM G+ G++D+A      +P +  S  W A
Sbjct: 489 VDQGRSFFD--LMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGA 546

Query: 520 IISCHGIHG 528
           ++    IHG
Sbjct: 547 LLGACRIHG 555



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 203/405 (50%), Gaps = 13/405 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H   V  G    +F    L++ Y  LG L+ +   F  ++ R++ TWNS+IS   + G+
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGK 249

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFE-WDVFVA 181
           ++ AV+ F+   + SG+ PD  T   +  A   C + +  K +HC V + G++  D+   
Sbjct: 250 VAAAVELFHGM-MESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAG 308

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGV 240
            +++ MY +    + A+K+FD++P RD  SWN +I+GY Q+G A EA+ I ++M   EG+
Sbjct: 309 NAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGL 368

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                T  S+LP  +    +  G+ +H   +K GL  +++V+  LI++YAK G +  A+ 
Sbjct: 369 KPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMF 428

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F+ M  R    WN+IIA          A   F+ MQQ  I+PD +T VSL +  +    
Sbjct: 429 LFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGL 488

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
               RS    +      +        +VDM  + G ++ A    + +P+K D   W  L+
Sbjct: 489 VDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALL 548

Query: 420 TGYAQNGLASEAIEVFQMMEE-CNEINP-NQGTYVSILPAYSHVG 462
                +G     +E+ ++  +   E++P N G YV +   Y+ +G
Sbjct: 549 GACRIHG----NVEMGKVASQNLFELDPENVGYYVLMSNMYAKIG 589



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 12/195 (6%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L    R+HAL + +G    V+ +T L++ YA  G L  +   F+H+  R+   WN++I+ 
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWD 177
               G  ++A+  F Q      ++PD  TF  +L AC +  LVD  +    +++  +   
Sbjct: 448 LGVHGHGAKALSLFSQMQQEE-IKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGI- 505

Query: 178 VFVA---ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILD 233
           V +A     ++ M  R G  + A +    MP++ DS  W A++ G C+    VE   +  
Sbjct: 506 VPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALL-GACRIHGNVEMGKVAS 564

Query: 234 EMRLEGVSMDPITVA 248
           +   E   +DP  V 
Sbjct: 565 QNLFE---LDPENVG 576


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/569 (66%), Positives = 466/569 (81%), Gaps = 2/569 (0%)

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           PV     ++L G  IH  ++K G E+++FV+ +L++MY++FG++  A ++FD M  RD  
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I+ Y Q+ +   A      M+  G++ D +T+ S+  + AQ+ D  + + +H ++
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G   E + + NA+++MYAK G +  A  VF GL +KDV+SWNTLITGYAQNGLASEA
Sbjct: 122 IKHGLEFE-LFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEA 179

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           IEV+ +MEE  EI PNQGT+VSILPAYSHVGAL+QG++IH +VIKNCL  DVFV TCL+D
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MYGKCG++DDA+SLFYQVPR +SVPWNA+ISC+G+HG G+KAL  FR+M  E V+PDHIT
Sbjct: 240 MYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHIT 299

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           FVSLL+ACSHSGLVS+ Q  F+MM+EE+GIKP LKHYGCMVDLFGRAG L MA NFI+ M
Sbjct: 300 FVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM 359

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P++PDAS WGALL ACRIHGN+ELG  AS+RLFEVDSENVGYYVL+SNIYANVGKWEGVD
Sbjct: 360 PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVD 419

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           +VRSLARDRGL+K PGWSSI +NNKVD+FYTGN+THPK E+IY ELR+LT+K+K++GYVP
Sbjct: 420 DVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVP 479

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D  FVLQDVEEDEKEHIL  HSERLAIA+GIIS+ PK+PI+IFKNLRVCGDCH  TKFIS
Sbjct: 480 DFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFIS 539

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
            ITEREIIVRDS+RFHHFK G CSCGDYW
Sbjct: 540 IITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 183/393 (46%), Positives = 253/393 (64%), Gaps = 26/393 (6%)

Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           PPV+KAC +L+DGKKIHC VLKLGFEWDVFVAASL+HMY RFGL   ARKLFDDMP RD 
Sbjct: 1   PPVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDR 60

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
           GSWNAMISGYCQ+GNA EALDI DEMRLEGV MD ITVAS+LPVCA+  +ILSG LIHLY
Sbjct: 61  GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           ++KHGLEF LFVSN LINMYAKFG + HA +VF  ++ +DVVSWN++I  Y Q+     A
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEA 179

Query: 330 HGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
              +  M++   I P+  T VS+    + +   +    +HG +++   +  DV +G  ++
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLY-SDVFVGTCLI 238

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMY K G ++ A ++F  +P K+ + WN +I+ Y  +G   +A+E+F+ M +   + P+ 
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREM-KAERVKPDH 297

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT-----------CLVDMYGKCG 497
            T+VS+L A SH G +               CF++               C+VD++G+ G
Sbjct: 298 ITFVSLLSACSHSGLVSDAQ----------WCFNMMEEEYGIKPSLKHYGCMVDLFGRAG 347

Query: 498 RIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
            ++ A +   ++P +  +  W A+++   IHG 
Sbjct: 348 ELEMAFNFIKKMPIQPDASAWGALLNACRIHGN 380



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 215/419 (51%), Gaps = 17/419 (4%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           + ++C  L   K++H L++  G    VF +  LV+ Y+  G +  +R  FD +  R+  +
Sbjct: 3   VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGS 62

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN+MIS Y + G  +EA+D   +  L  G++ D  T   VL  C  + D   GK IH  V
Sbjct: 63  WNAMISGYCQNGNAAEALDIADEMRL-EGVKMDAITVASVLPVCAQVGDILSGKLIHLYV 121

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K G E+++FV+ +L++MY +FG    A+K+F  + ++D  SWN +I+GY Q+G A EA+
Sbjct: 122 IKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAI 180

Query: 230 DILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           ++   M   E +  +  T  SILP  +    +  G+ IH  ++K+ L  ++FV   LI+M
Sbjct: 181 EVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDM 240

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G +  A+ +F Q+  ++ V WN++I+ Y    D   A   F  M+   ++PD +T 
Sbjct: 241 YGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITF 300

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           VSL S  +      +++     +         +     +VD++ + G +  A    + +P
Sbjct: 301 VSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP 360

Query: 409 VK-DVISWNTLITGYAQNG---LASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVG 462
           ++ D  +W  L+     +G   L   A E +F++  E      N G YV +   Y++VG
Sbjct: 361 IQPDASAWGALLNACRIHGNIELGKHASERLFEVDSE------NVGYYVLLSNIYANVG 413



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 14/195 (7%)

Query: 39  DCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           + + N+   +     +     L    R+H  ++ +     VF  T L++ Y   G L  +
Sbjct: 191 EIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDA 250

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
              F  +  +N   WN+MIS Y   G   +A++ F +      ++PD  TF  +L AC +
Sbjct: 251 ISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMK-AERVKPDHITFVSLLSACSH 309

Query: 159 --LVDGKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DS 209
             LV   +   +++    E +  +  SL H  C      R G   +A      MP++ D+
Sbjct: 310 SGLVSDAQWCFNMM----EEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDA 365

Query: 210 GSWNAMISGYCQSGN 224
            +W A+++     GN
Sbjct: 366 SAWGALLNACRIHGN 380


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/715 (47%), Positives = 472/715 (66%), Gaps = 6/715 (0%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           N   W   I  YV+ G  ++A+  +YQ   T G+ PD   F  V+KAC +  D   G+K+
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRT-GINPDKLVFLSVIKACGSQSDLQAGRKV 142

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++  GFE DV V  +L  MY + G    AR++FD MP RD  SWNA+I+GY Q+G  
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EAL +  EM++ G+  +  T+ S++PVCA    +  G  IH Y ++ G+E ++ V N L
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGL 262

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +NMYAK G +  A ++F++M  RDV SWN+II  Y  ++    A  FF  MQ  GI+P+ 
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T+VS+    A L      + +HG+ +R G+   DV+ GNA+V+MYAK G +NSA  +FE
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVV-GNALVNMYAKCGNVNSAYKLFE 381

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P K+V++WN +I+GY+Q+G   EA+ +F  M+    I P+    VS+LPA +H  AL 
Sbjct: 382 RMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQ-AQGIKPDSFAIVSVLPACAHFLALE 440

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           QG +IH   I++    +V V T LVD+Y KCG ++ A  LF ++P    V W  +I  +G
Sbjct: 441 QGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYG 500

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           IHG G+ AL  F +M + G + DHI F ++LTACSH+GLV +G +YF  M+ ++G+ P L
Sbjct: 501 IHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKL 560

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HY C+VDL GRAGHL  A+  I+NM + PDA++WGALLGACRIH N+ELG  A+  LFE
Sbjct: 561 EHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFE 620

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +D +N GYYVL+SNIYA   +WE V ++R + +++G+KK PG S + V+  V  F  G+R
Sbjct: 621 LDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDR 680

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
           THP+ E+IY  L  L  +M+  GYVP+ +  LQDVEE+ KE+IL+SHSE+LAI+FGII++
Sbjct: 681 THPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINT 740

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            P  PI+I KNLRVC DCHN TKFIS+I  REIIVRD+NRFHH K+G CSCGDYW
Sbjct: 741 SPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 183/575 (31%), Positives = 300/575 (52%), Gaps = 43/575 (7%)

Query: 36  ISPDCLENESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL 92
           I+PD       ++ F  + ++C   + L   +++H  ++  G    V   T L + Y   
Sbjct: 116 INPD-------KLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKC 168

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G L  +R  FD +  R+V +WN++I+ Y + G+  EA+  F +  + +G++P+  T   V
Sbjct: 169 GSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQV-NGIKPNSSTLVSV 227

Query: 153 LKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           +  C +L+    GK+IHC  ++ G E DV V   L++MY + G  N A KLF+ MP+RD 
Sbjct: 228 MPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDV 287

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SWNA+I GY  +    EAL   + M++ G+  + IT+ S+LP CA    +  G  IH Y
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            ++ G E N  V N L+NMYAK G +  A ++F++M +++VV+WN+II+ Y Q   P  A
Sbjct: 348 AIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEA 407

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  MQ  GI+PD   +VS+    A        + +HG+ +R G F  +V++G  +VD
Sbjct: 408 LALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSG-FESNVVVGTGLVD 466

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +YAK G +N+A  +FE +P +DV+SW T+I  Y  +G   +A+ +F  M+E      +  
Sbjct: 467 IYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETG-TKLDHI 525

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAM 503
            + +IL A SH G + QG++        C+  D  +A       CLVD+ G+ G +D+A 
Sbjct: 526 AFTAILTACSHAGLVDQGLQYF-----QCMKSDYGLAPKLEHYACLVDLLGRAGHLDEAN 580

Query: 504 SLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
            +   +     +  W A++    IH   +      + + +  + PD+  +  LL     S
Sbjct: 581 GIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFE--LDPDNAGYYVLL-----S 633

Query: 563 GLVSEGQRY-----FHMMQEEFGIKPHLKHYGCMV 592
            + +E QR+        M +E G+K   K  GC V
Sbjct: 634 NIYAEAQRWEDVAKLRKMMKEKGVK---KQPGCSV 665



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 179/327 (54%), Gaps = 4/327 (1%)

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           +  + V W   I  Y ++     A   +  MQ+ GI PD L  +S+       +D +  R
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VH  I+ RG F  DVI+G A+  MY K G + +A  VF+ +P +DV+SWN +I GY+QN
Sbjct: 141 KVHEDIIARG-FESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G   EA+ +F  M + N I PN  T VS++P  +H+ AL QG +IH   I++ +  DV V
Sbjct: 200 GQPYEALALFSEM-QVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV 258

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              LV+MY KCG ++ A  LF ++P      WNAII  + ++ Q  +AL FF +M   G+
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +P+ IT VS+L AC+H   + +GQ+  H      G + +      +V+++ + G++  A+
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQ-IHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAY 377

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGN 632
              + MP + +   W A++     HG+
Sbjct: 378 KLFERMP-KKNVVAWNAIISGYSQHGH 403


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 321/792 (40%), Positives = 491/792 (61%), Gaps = 12/792 (1%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           Q+  D ++ + R   F  +  +C    +V   + L+ L++ +G    +F  T L+N +  
Sbjct: 201 QMVQDSVKPDKRT--FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            GD+  +   FD++  R++ TW SMI+   R GR  +A + F Q     G++PD   F  
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF-QRMEEEGVQPDKVAFVS 317

Query: 152 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+AC +   L  GKK+H  + ++G++ +++V  ++L MY + G    A ++FD +  R+
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW AMI+G+ Q G   EA    ++M   G+  + +T  SIL  C+    +  G  I  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           +I++ G   +  V   L++MYAK G ++ A RVF+++ +++VV+WN++I AY Q      
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  + + GI+P+  T  S+ ++    +     + VH  IM+ G    D+ + NA+V
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG-LESDLHVSNALV 556

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
            M+   G + SA  +F  +P +D++SWNT+I G+ Q+G    A + F+MM+E   I P++
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG-IKPDK 615

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T+  +L A +   AL +G ++HA + +     DV V T L+ MY KCG I+DA  +F++
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHK 675

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P+ +   W ++I+ +  HG+G +AL  F QM  EGV+PD ITFV  L+AC+H+GL+ EG
Sbjct: 676 LPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
             +F  M+E F I+P ++HYGCMVDLFGRAG L  A  FI  M V PD+ +WGALLGAC+
Sbjct: 736 LHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           +H N+EL   A+ +  E+D  + G +V++SNIYA  G W+ V ++R +  DRG+ K PG 
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI 748
           S IEV+ KV  FY+ ++THP+ E+I+ EL  L  +M+ LGYVPD  +VL DVE++EKE  
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQA 914

Query: 749 LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
           L  HSERLAI +G++ +PP +PI I KNLRVCGDCH  TKFIS+IT+R+II RDSNRFHH
Sbjct: 915 LFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHH 974

Query: 809 FKDGICSCGDYW 820
           FKDG+CSCGD+W
Sbjct: 975 FKDGVCSCGDFW 986



 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 179/608 (29%), Positives = 314/608 (51%), Gaps = 14/608 (2%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L Q C K  ++   +R++  +  SG    +F    L+N YA  G+   ++  FD + 
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR 172

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            ++VY+WN ++  YV+ G   EA     Q    S ++PD  TF  +L AC   RN+  G+
Sbjct: 173 EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-VKPDKRTFVSMLNACADARNVDKGR 231

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +++  +LK G++ D+FV  +L++M+ + G    A K+FD++P RD  +W +MI+G  + G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A ++   M  EGV  D +   S+L  C   + +  G  +H  + + G +  ++V  
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            +++MY K G M  AL VFD +  R+VVSW ++IA + Q      A  FF  M ++GI+P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +T +S+    +  +  +  + +   I+  G+  +D  +  A++ MYAK G +  A  V
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR-VRTALLSMYAKCGSLKDAHRV 470

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  ++V++WN +IT Y Q+     A+  FQ + +   I PN  T+ SIL       +
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKPNSSTFTSILNVCKSSDS 529

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G  +H  ++K  L  D+ V+  LV M+  CG +  A +LF  +P+   V WN II+ 
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+   A ++F+ M + G++PD ITF  LL AC+    ++EG+R  H +  E     
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDC 648

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            +     ++ ++ + G +  AH     +P + +   W +++     HG    G  A +  
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGR---GKEALELF 704

Query: 644 FEVDSENV 651
           +++  E V
Sbjct: 705 YQMQQEGV 712



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 279/526 (53%), Gaps = 8/526 (1%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           N++++   + G+ +EA+    +   +S ++    T+  +L+ C   +NL DG++I+  + 
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVD-SSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIK 137

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G + D+F+  +L++MY + G    A+++FDDM  +D  SWN ++ GY Q G   EA  
Sbjct: 138 KSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFK 197

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + ++M  + V  D  T  S+L  CA + N+  G  ++  I+K G + +LFV   LINM+ 
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  A +VFD +  RD+V+W S+I    +      A   F  M++ G+QPD +  VS
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           L             + VH  +   GW  E + +G A++ MY K G +  A  VF+ +  +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTE-IYVGTAILSMYTKCGSMEDALEVFDLVKGR 376

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +V+SW  +I G+AQ+G   EA   F  M E   I PN+ T++SIL A S   AL++G +I
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSPSALKRGQQI 435

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              +I+     D  V T L+ MY KCG + DA  +F ++ + + V WNA+I+ +  H Q 
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           D AL  F+ +L EG++P+  TF S+L  C  S  +  G ++ H +  + G++  L     
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNA 554

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +V +F   G L  A N   +MP R D   W  ++     HG  ++ 
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVA 599



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 240/422 (56%), Gaps = 6/422 (1%)

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
           ++D+   NA+++   ++G   EA+ +L+ +    + +   T +++L +C +  N+  G  
Sbjct: 72  IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           I+ +I K G++ ++F+ N LINMYAK G    A ++FD M E+DV SWN ++  Y Q   
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A      M Q  ++PD  T VS+ +  A   +    R ++  I++ GW   D+ +G 
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT-DLFVGT 250

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+++M+ K G I  A  VF+ LP +D+++W ++ITG A++G   +A  +FQ MEE   + 
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE-EGVQ 309

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P++  +VS+L A +H  AL QG K+HAR+ +     +++V T ++ MY KCG ++DA+ +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  V   + V W A+I+    HG+ D+A  FF +M++ G+ P+ +TF+S+L ACS    +
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429

Query: 566 SEGQRYF-HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
             GQ+   H+++  +G    ++    ++ ++ + G L  AH   + +  + +   W A++
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMI 486

Query: 625 GA 626
            A
Sbjct: 487 TA 488


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 321/792 (40%), Positives = 491/792 (61%), Gaps = 12/792 (1%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           Q+  D ++ + R   F  +  +C    +V   + L+ L++ +G    +F  T L+N +  
Sbjct: 201 QMVQDSVKPDKRT--FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            GD+  +   FD++  R++ TW SMI+   R GR  +A + F Q     G++PD   F  
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF-QRMEEEGVQPDKVAFVS 317

Query: 152 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+AC +   L  GKK+H  + ++G++ +++V  ++L MY + G    A ++FD +  R+
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN 377

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW AMI+G+ Q G   EA    ++M   G+  + +T  SIL  C+    +  G  I  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           +I++ G   +  V   L++MYAK G ++ A RVF+++ +++VV+WN++I AY Q      
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  + + GI+P+  T  S+ ++    +     + VH  IM+ G    D+ + NA+V
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG-LESDLHVSNALV 556

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
            M+   G + SA  +F  +P +D++SWNT+I G+ Q+G    A + F+MM+E   I P++
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG-IKPDK 615

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T+  +L A +   AL +G ++HA + +     DV V T L+ MY KCG I+DA  +F++
Sbjct: 616 ITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHK 675

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P+ +   W ++I+ +  HG+G +AL  F QM  EGV+PD ITFV  L+AC+H+GL+ EG
Sbjct: 676 LPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
             +F  M+E F I+P ++HYGCMVDLFGRAG L  A  FI  M V PD+ +WGALLGAC+
Sbjct: 736 LHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           +H N+EL   A+ +  E+D  + G +V++SNIYA  G W+ V ++R +  DRG+ K PG 
Sbjct: 795 VHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI 748
           S IEV+ KV  FY+ ++THP+ E+I+ EL  L  +M+ LGYVPD  +VL DVE++EKE  
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQA 914

Query: 749 LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
           L  HSERLAI +G++ +PP +PI I KNLRVCGDCH  TKFIS+IT+R+II RDSNRFHH
Sbjct: 915 LFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHH 974

Query: 809 FKDGICSCGDYW 820
           FKDG+CSCGD+W
Sbjct: 975 FKDGVCSCGDFW 986



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 179/608 (29%), Positives = 314/608 (51%), Gaps = 14/608 (2%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L Q C K  ++   +R++  +  SG    +F    L+N YA  G+   ++  FD + 
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR 172

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            ++VY+WN ++  YV+ G   EA     Q    S ++PD  TF  +L AC   RN+  G+
Sbjct: 173 EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS-VKPDKRTFVSMLNACADARNVDKGR 231

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +++  +LK G++ D+FV  +L++M+ + G    A K+FD++P RD  +W +MI+G  + G
Sbjct: 232 ELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG 291

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A ++   M  EGV  D +   S+L  C   + +  G  +H  + + G +  ++V  
Sbjct: 292 RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGT 351

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            +++MY K G M  AL VFD +  R+VVSW ++IA + Q      A  FF  M ++GI+P
Sbjct: 352 AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +T +S+    +  +  +  + +   I+  G+  +D  +  A++ MYAK G +  A  V
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR-VRTALLSMYAKCGSLKDAHRV 470

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  ++V++WN +IT Y Q+     A+  FQ + +   I PN  T+ SIL       +
Sbjct: 471 FEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLK-EGIKPNSSTFTSILNVCKSSDS 529

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G  +H  ++K  L  D+ V+  LV M+  CG +  A +LF  +P+   V WN II+ 
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAG 589

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+   A ++F+ M + G++PD ITF  LL AC+    ++EG+R  H +  E     
Sbjct: 590 FVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRR-LHALITEAAFDC 648

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            +     ++ ++ + G +  AH     +P + +   W +++     HG    G  A +  
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGR---GKEALELF 704

Query: 644 FEVDSENV 651
           +++  E V
Sbjct: 705 YQMQQEGV 712



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 279/526 (53%), Gaps = 8/526 (1%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           N++++   + G+ +EA+    +   +S ++    T+  +L+ C   +NL DG++I+  + 
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVD-SSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIK 137

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G + D+F+  +L++MY + G    A+++FDDM  +D  SWN ++ GY Q G   EA  
Sbjct: 138 KSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFK 197

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + ++M  + V  D  T  S+L  CA + N+  G  ++  I+K G + +LFV   LINM+ 
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  A +VFD +  RD+V+W S+I    +      A   F  M++ G+QPD +  VS
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVS 317

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           L             + VH  +   GW  E + +G A++ MY K G +  A  VF+ +  +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGWDTE-IYVGTAILSMYTKCGSMEDALEVFDLVKGR 376

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +V+SW  +I G+AQ+G   EA   F  M E   I PN+ T++SIL A S   AL++G +I
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSILGACSSPSALKRGQQI 435

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              +I+     D  V T L+ MY KCG + DA  +F ++ + + V WNA+I+ +  H Q 
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQY 495

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           D AL  F+ +L EG++P+  TF S+L  C  S  +  G ++ H +  + G++  L     
Sbjct: 496 DNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLIMKAGLESDLHVSNA 554

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +V +F   G L  A N   +MP R D   W  ++     HG  ++ 
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVA 599



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 240/422 (56%), Gaps = 6/422 (1%)

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
           ++D+   NA+++   ++G   EA+ +L+ +    + +   T +++L +C +  N+  G  
Sbjct: 72  IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           I+ +I K G++ ++F+ N LINMYAK G    A ++FD M E+DV SWN ++  Y Q   
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A      M Q  ++PD  T VS+ +  A   +    R ++  I++ GW   D+ +G 
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT-DLFVGT 250

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+++M+ K G I  A  VF+ LP +D+++W ++ITG A++G   +A  +FQ MEE   + 
Sbjct: 251 ALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEE-EGVQ 309

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P++  +VS+L A +H  AL QG K+HAR+ +     +++V T ++ MY KCG ++DA+ +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  V   + V W A+I+    HG+ D+A  FF +M++ G+ P+ +TF+S+L ACS    +
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429

Query: 566 SEGQRYF-HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
             GQ+   H+++  +G    ++    ++ ++ + G L  AH   + +  + +   W A++
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMI 486

Query: 625 GA 626
            A
Sbjct: 487 TA 488


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 323/761 (42%), Positives = 488/761 (64%), Gaps = 9/761 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVRC 123
            +H L +  G +  VF +  +V  Y    DL+ +R  FD +  + +V +WNSMIS Y   
Sbjct: 237 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G+  EA+  F +    S L P+ YTF   L+AC +   +  G  IH +VLK  +  +VFV
Sbjct: 297 GQSIEALRLFGEMQKAS-LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY RFG    A  +F +M   D+ SWN+M+SG+ Q+G   EAL    EMR  G 
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D + V SI+   ARS N L+G+ IH Y +K+GL+ +L V N+L++MYAKF  M++   
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 475

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD+M ++DVVSW +IIA + Q+     A   F  +Q  GI  D++ + S+    + L  
Sbjct: 476 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 535

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             + + +H +I+R+G  + D+++ N +VD+Y + G ++ A  +FE +  KDV+SW ++I+
Sbjct: 536 ISSVKEIHSYIIRKG--LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMIS 593

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            Y  NGLA+EA+E+F +M+E   + P+  + VSIL A + + AL++G +IH  +I+    
Sbjct: 594 CYVHNGLANEALELFHLMKETG-VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFV 652

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            +  +A+ LVDMY +CG ++ + ++F  +     V W ++I+ +G+HG G  A++ FR+M
Sbjct: 653 LEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRM 712

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            DE + PDHI FV++L ACSHSGL++EG+R+   M+ E+ ++P  +HY C+VDL GRA H
Sbjct: 713 EDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANH 772

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A+ F++ M V P A +W ALLGAC+IH N ELG +A+ +L E+D EN G YVL+SN+
Sbjct: 773 LEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNV 832

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA   +W+ V+EVR   +  GLKK PG S IEV NKV  F   +++HP+  +IY +L  +
Sbjct: 833 YAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQI 892

Query: 721 TAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           T K+ K  GYV    FVL + +E+EK  +L  HSERLAIA+G++++P  + ++I KNLRV
Sbjct: 893 TEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRV 952

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCHN+ K IS+  ERE+++RD+NRFHHFK G+CSCGD W
Sbjct: 953 CGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 211/651 (32%), Positives = 351/651 (53%), Gaps = 25/651 (3%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALL 70
           R +CK   + +A + L    AN    SP     +       +L  S   L   +++HA +
Sbjct: 84  REICKRGSVNEAFQSLTDLFANQ---SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHM 140

Query: 71  VVSGKI-KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           + S  +  +VF ST+LV  Y   G L  +   FD + ++ ++TWN+MI  YV  G    +
Sbjct: 141 ITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGS 200

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLH 186
           ++  Y+    SG+  D  TFP +LKAC  L D   G ++H   +K G+   VFVA S++ 
Sbjct: 201 LE-LYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVG 259

Query: 187 MYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           MY +    N AR+LFD MP + D  SWN+MIS Y  +G ++EAL +  EM+   ++ +  
Sbjct: 260 MYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTY 319

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T  + L  C  S  I  G+ IH  ++K     N+FV+N LI MYA+FG M  A  +F  M
Sbjct: 320 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 379

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            + D +SWNS+++ + Q+     A  F+  M+ AG +PDL+ ++S+ +  A+  +  N  
Sbjct: 380 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGM 439

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H + M+ G    D+ +GN++VDMYAK   +     +F+ +P KDV+SW T+I G+AQN
Sbjct: 440 QIHAYAMKNG-LDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 498

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G  S A+E+F+ + +   I+ +     SIL A S +  +    +IH+ +I+  L  D+ +
Sbjct: 499 GSHSRALELFREV-QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVL 556

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              +VD+YG+CG +D A  +F  +     V W ++ISC+  +G  ++AL  F  M + GV
Sbjct: 557 QNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGV 616

Query: 546 RPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
            PD I+ VS+L+A +    + +G+  +  ++++ F ++  L     +VD++ R G L  +
Sbjct: 617 EPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKS 674

Query: 605 H---NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
               NFI+N     D  +W +++ A  +HG    G  A D    ++ E++ 
Sbjct: 675 RNVFNFIRN----KDLVLWTSMINAYGMHG---CGRAAIDLFRRMEDESIA 718



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR- 122
           K +H  L+  G +     ++ LV+ YA  G L  SR+ F+ I  +++  W SMI+ Y   
Sbjct: 640 KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMH 699

Query: 123 -CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWDVF 179
            CGR   A+D F +    S + PD   F  VL AC +  L++  +     +K  ++ + +
Sbjct: 700 GCGR--AAIDLFRRMEDES-IAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPW 756

Query: 180 VA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALDILDEMR 236
                 L+ +  R      A +    M V  +   W A++ G CQ  +  E  +I  +  
Sbjct: 757 PEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALL-GACQIHSNKELGEIAAQKL 815

Query: 237 LEGVSMDP 244
           LE   MDP
Sbjct: 816 LE---MDP 820


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 327/771 (42%), Positives = 471/771 (61%), Gaps = 7/771 (0%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L + CT +  + +   L++ +G        TKLV+ +   G L  +   F  I  +    
Sbjct: 83  LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDEL 142

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           +++M+  Y R   L +AV  F +     G+RP  Y F  +LK C +  D   GK+IHC +
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRY-DGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQL 201

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  GF  +VF    +++MY +  L   A K+FD MP RD   WN +ISGY Q+G    AL
Sbjct: 202 IVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTAL 261

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +++  M+ EG   D IT+ SILP  A   ++  G  IH Y ++ G E  + VS  L++MY
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMY 321

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  +FD+M  + VVSWNS+I  Y Q+ DP  A   F  M    ++   +T++
Sbjct: 322 SKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVM 381

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                 A L D    R VH  ++ +     DV + N+++ MY+K   ++ A  +FE L  
Sbjct: 382 GALHACADLGDVEQGRFVHK-LLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH 440

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K ++SWN +I GYAQNG  +EAI+ F  M+  N I P+  T VS++PA + +  L Q   
Sbjct: 441 KTLVSWNAMILGYAQNGRINEAIDYFCKMQLQN-IKPDSFTMVSVIPALAELSVLPQAKW 499

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  VI+ CL  +VFVAT LVDMY KCG +  A  LF  +       WNA+I  +G HG 
Sbjct: 500 IHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGL 559

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G  AL  F +M  E ++P+ +TF+ +L+ACSHSGLV EG +YF  M++++G++P + HYG
Sbjct: 560 GKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYG 619

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            MVDL GRA  L  A +FIQ MP+ P  S++GA+LGACRIH N+ELG  A++R+F++D +
Sbjct: 620 AMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPD 679

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + GY+VL++NIYA    W+ V  VR+    +G++KTPGWS +E+ N+V  FY+G  +HP+
Sbjct: 680 DGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQ 739

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            +KIY  L  L  ++K+ GY+PD + V  DVE+  KE +L SHSE+LAIAF ++++ P +
Sbjct: 740 AKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGT 798

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I + KNLRVCGDCHN TK+IS +T+REIIVRD  RFHHFKDG CSCGDYW
Sbjct: 799 TIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  629 bits (1623), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/761 (42%), Positives = 486/761 (63%), Gaps = 9/761 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVRC 123
            +H L +  G +  VF +  +V  Y    DL+ +R  FD +  + +V +WNSMIS Y   
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G+  EA+  F +    S L P+ YTF   L+AC +   +  G  IH +VLK  +  +VFV
Sbjct: 261 GQSIEALRLFGEMQKAS-LAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY RFG    A  +F +M   D+ SWN+M+SG+ Q+G   EAL    EMR  G 
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D + V SI+   ARS N L G+ IH Y +K+GL+ +L V N+L++MYAKF  M++   
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC 439

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD+M ++DVVSW +IIA + Q+     A   F  +Q  GI  D++ + S+    + L  
Sbjct: 440 IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             + + +H +I+R+G  + D+++ N +VD+Y + G ++ A  +FE +  KDV+SW ++I+
Sbjct: 500 ISSVKEIHSYIIRKG--LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMIS 557

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            Y  NGLA+EA+E+F +M+E   + P+  + VSIL A + + AL++G +IH  +I+    
Sbjct: 558 CYVHNGLANEALELFHLMKETG-VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFV 616

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            +  +A+ LVDMY +CG ++ + ++F  +     V W ++I+ +G+HG G  A++ FR+M
Sbjct: 617 LEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRM 676

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            DE + PDHI FV++L ACSHSGL++EG+R+   M+ E+ ++P  +HY C+VDL GRA H
Sbjct: 677 EDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANH 736

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A+ F++ M V P A +W ALLGAC+IH N ELG +A+ +L E+D EN G YVL+SN+
Sbjct: 737 LEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNV 796

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           Y+   +W+ V+ VR   +  GLKK PG S IEV NKV  F   +++HP+  +IY +L  +
Sbjct: 797 YSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQI 856

Query: 721 TAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           T K+ K  GYV    FVL + +E+EK  +L  HSERLAIA+G++++P  + ++I KNLRV
Sbjct: 857 TEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRV 916

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCHN+ K IS+  ERE+++RD+NRFHHFK G+CSCGD W
Sbjct: 917 CGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 210/651 (32%), Positives = 351/651 (53%), Gaps = 25/651 (3%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALL 70
           R +CK   + +A + L    AN    SP     +       +L  S   L   +++HA +
Sbjct: 48  REICKRGSVNEAFQSLTDLFANQ---SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHM 104

Query: 71  VVSGKI-KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           + S  +  +VF ST+LV  Y   G L  +   FD + ++ ++TWN+MI  YV  G    +
Sbjct: 105 ITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGS 164

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLH 186
           ++  Y+    SG+  D  TFP +LKAC  L D   G ++H   +K G+   VFVA S++ 
Sbjct: 165 LE-LYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVG 223

Query: 187 MYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           MY +    N AR+LFD MP + D  SWN+MIS Y  +G ++EAL +  EM+   ++ +  
Sbjct: 224 MYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTY 283

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T  + L  C  S  I  G+ IH  ++K     N+FV+N LI MYA+FG M  A  +F  M
Sbjct: 284 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 343

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            + D +SWNS+++ + Q+     A  F+  M+ AG +PDL+ ++S+ +  A+  +  +  
Sbjct: 344 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGM 403

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H + M+ G    D+ +GN++VDMYAK   +     +F+ +P KDV+SW T+I G+AQN
Sbjct: 404 QIHAYAMKNG-LDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 462

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G  S A+E+F+ + +   I+ +     SIL A S +  +    +IH+ +I+  L  D+ +
Sbjct: 463 GSHSRALELFREV-QLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVL 520

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              +VD+YG+CG +D A  +F  +     V W ++ISC+  +G  ++AL  F  M + GV
Sbjct: 521 QNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGV 580

Query: 546 RPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
            PD I+ VS+L+A +    + +G+  +  ++++ F ++  L     +VD++ R G L  +
Sbjct: 581 EPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLVDMYARCGTLEKS 638

Query: 605 H---NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
               NFI+N     D  +W +++ A  +HG    G  A D    ++ E++ 
Sbjct: 639 RNVFNFIRN----KDLVLWTSMINAYGMHG---CGRAAIDLFRRMEDESIA 682



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR- 122
           K +H  L+  G +     ++ LV+ YA  G L  SR+ F+ I  +++  W SMI+ Y   
Sbjct: 604 KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMH 663

Query: 123 -CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWDVF 179
            CGR   A+D F +    S + PD   F  VL AC +  L++  +     +K  ++ + +
Sbjct: 664 GCGR--AAIDLFRRMEDES-IAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPW 720

Query: 180 VA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALDILDEMR 236
               A L+ +  R      A +    M V  +   W A++ G CQ  +  E  +I  +  
Sbjct: 721 PEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALL-GACQIHSNKELGEIAAQKL 779

Query: 237 LEGVSMDP 244
           LE   MDP
Sbjct: 780 LE---MDP 784


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 313/742 (42%), Positives = 453/742 (61%), Gaps = 5/742 (0%)

Query: 82   STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
            S  L++ Y+  GD+  +R  FD +  ++  +W +M++ Y   G   E ++ F +  L + 
Sbjct: 266  SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325

Query: 142  LRPDFYTFPPVLKACR--NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
                       L A    +L  GK+IH   L+   + D+ VA  L+ MY + G    A++
Sbjct: 326  RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385

Query: 200  LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
            LF  +  RD  +W+A+I+   Q+G   EAL +  EM+ + +  + +T+ SILP CA    
Sbjct: 386  LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445

Query: 260  ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
            +  G  IH + VK  ++ +L     L++MYAK G    AL  F++M  RD+V+WNS+I  
Sbjct: 446  LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505

Query: 320  YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
            Y Q  DP  A   F  ++ + I PD  T+V +    A LND      +HG I++ G F  
Sbjct: 506  YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG-FES 564

Query: 380  DVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D  + NA++DMYAK G + SA  +F      KD ++WN +I  Y QNG A EAI  F  M
Sbjct: 565  DCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM 624

Query: 439  EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
               N  +PN  T+VS+LPA +++ A R+G+  HA +I+     +  V   L+DMY KCG+
Sbjct: 625  RLEN-FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQ 683

Query: 499  IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
            +D +  LF ++    +V WNA++S + +HG GD+A+  F  M +  V+ D ++FVS+L+A
Sbjct: 684  LDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSA 743

Query: 559  CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
            C H+GLV EG++ FH M +++ IKP L+HY CMVDL GRAG       FI+ MPV PDA 
Sbjct: 744  CRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAG 803

Query: 619  IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
            +WGALLG+CR+H N++LG VA D L +++  N  ++V++S+IYA  G+W    + RS   
Sbjct: 804  VWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMN 863

Query: 679  DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            D GLKKTPG S +E+ NKV  F  G+++HP+ E ++     L  KM+ +GYVPD+S VLQ
Sbjct: 864  DLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQ 923

Query: 739  DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
            +VEE++KE  L SHSERLAI F ++++PP S IQI KNLRVC DCH  TKFIS+IT R I
Sbjct: 924  NVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRI 983

Query: 799  IVRDSNRFHHFKDGICSCGDYW 820
            IVRD+ RFHHF+DGICSC DYW
Sbjct: 984  IVRDATRFHHFEDGICSCNDYW 1005



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 185/615 (30%), Positives = 308/615 (50%), Gaps = 10/615 (1%)

Query: 21  QAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVF 80
           Q  R   S A  + +         +  + +  L  SC  L+ + ++HA ++VSG  K   
Sbjct: 6   QLRRSFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSG-FKHHH 64

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           S T L+N Y+       +R  FD     +   WNSMI  Y R  + +EA++ +Y   +  
Sbjct: 65  SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM-VEK 123

Query: 141 GLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           GL PD YTF  VLKAC    NL +G   H  + + G E DVF+ A L+ MY + G    A
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++FD MP RD  +WNAMI+G  QS +  EA+D    M+L GV    +++ ++ P   + 
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            NI     IH Y+ +   +F+  VSN LI++Y+K G +  A RVFDQM+++D VSW +++
Sbjct: 244 SNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y  +   +     F  M+   ++ + ++ VS     A+  D    + +HG  +++   
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR-I 360

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             D+++   ++ MYAK G    A  +F GL  +D+++W+ +I    Q G   EA+ +FQ 
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M+   ++ PN+ T +SILPA + +  L+ G  IH   +K  +  D+   T LV MY KCG
Sbjct: 421 MQN-QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG 479

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
               A++ F ++     V WN++I+ +   G    A++ F ++    + PD  T V ++ 
Sbjct: 480 FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVP 539

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           AC+    + +G    H +  + G +        ++D++ + G L  A           D 
Sbjct: 540 ACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDE 598

Query: 618 SIWGALLGACRIHGN 632
             W  ++ A   +G+
Sbjct: 599 VTWNVIIAAYMQNGH 613



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 183/597 (30%), Positives = 303/597 (50%), Gaps = 16/597 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  +  F  + ++CT   +++     H  +   G  + VF    LV+ Y+ +GDL  +R 
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT----FPPVLKAC 156
            FD +  R+V  WN+MI+   +     EAVD F    L  G+ P   +    FP + K  
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV-GVEPSSVSLLNLFPGICK-L 243

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
            N+   + IH  V +  F     V+  L+ +Y + G  +VAR++FD M  +D  SW  M+
Sbjct: 244 SNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +GY  +G  VE L++ D+M+L  V ++ ++  S     A + ++  G  IH   ++  ++
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++ V+  L+ MYAK G    A ++F  +  RD+V+W++IIAA  Q+  P  A   F  M
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q   ++P+ +TL+S+    A L+  +  +S+H F ++      D+  G A+V MYAK G 
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD-MDSDLSTGTALVSMYAKCGF 480

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             +A   F  +  +D+++WN+LI GYAQ G    AI++F  +   + INP+ GT V ++P
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL-RLSAINPDAGTMVGVVP 539

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
           A + +  L QG  IH  ++K     D  V   L+DMY KCG +  A  LF +       V
Sbjct: 540 ACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN II+ +  +G   +A++ F QM  E   P+ +TFVS+L A ++     EG   FH  
Sbjct: 600 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHAC 658

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             + G   +      ++D++ + G L  +      M  + D   W A+L    +HG+
Sbjct: 659 IIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAMLSGYAVHGH 714



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/543 (30%), Positives = 286/543 (52%), Gaps = 19/543 (3%)

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           +L+S    ++  +P +L +C++L    +IH  ++  GF+    +   L+++Y  F   ++
Sbjct: 23  SLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDL 81

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR +FD  P      WN+MI  Y +S    EAL++   M  +G+  D  T   +L  C  
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           + N+  G+  H  I + GLE ++F+   L++MY+K G ++ A  VFD+M +RDVV+WN++
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IA   QS DP  A  FF +MQ  G++P  ++L++L   + +L++    RS+HG++ RR +
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF 261

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
                 + N ++D+Y+K G ++ A  VF+ +  +D +SW T++ GYA NG   E +E+F 
Sbjct: 262 ---SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M+  N +  N+ + VS   A +    L +G +IH   ++  +  D+ VAT L+ MY KC
Sbjct: 319 KMKLGN-VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC 377

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G  + A  LF+ +     V W+AII+     G  ++AL+ F++M ++ ++P+ +T +S+L
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            AC+   L+  G+   H    +  +   L     +V ++ + G    A      M  R D
Sbjct: 438 PACADLSLLKLGKS-IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-D 495

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
              W +L     I+G  ++G    D    +D   + Y + +S I  + G   GV    +L
Sbjct: 496 IVTWNSL-----INGYAQIG----DPYNAID---MFYKLRLSAINPDAGTMVGVVPACAL 543

Query: 677 ARD 679
             D
Sbjct: 544 LND 546



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V +     + + T LV+ YA  G  + +  TF+ +S R++ TWNS+I+ Y + 
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G    A+D FY+  L S + PD  T   V+ AC  L D   G  IH  ++KLGFE D  V
Sbjct: 510 GDPYNAIDMFYKLRL-SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568

Query: 181 AASLLHMYCRFGLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
             +L+ MY + G    A  LF+     +D  +WN +I+ Y Q+G+A EA+    +MRLE 
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              + +T  S+LP  A       G+  H  I++ G   N  V N+LI+MYAK G + ++ 
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSE 688

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           ++F++M  +D VSWN++++ Y        A   F+ MQ++ +Q D ++ VS+ S      
Sbjct: 689 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAG 748

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
                R +   +  +     D+     +VD+  + G+ +      + +PV+ D   W  L
Sbjct: 749 LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGAL 808

Query: 419 I 419
           +
Sbjct: 809 L 809


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 318/774 (41%), Positives = 479/774 (61%), Gaps = 10/774 (1%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C    +V +   L +L++ +G    +F  T L+N +   G +  +   F+++  R+
Sbjct: 211 MLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRD 270

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           + TW SMI+   R  +  +A + F Q     G++PD   F  +LKAC +   L  GK++H
Sbjct: 271 LITWTSMITGLARHRQFKQACNLF-QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVH 329

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             + ++G + +++V  +LL MY + G    A ++F+ +  R+  SW AMI+G+ Q G   
Sbjct: 330 ARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRME 389

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA    ++M   G+  + +T  SIL  C+R   +  G  IH  I+K G   +  V   L+
Sbjct: 390 EAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALL 449

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MYAK G +  A  VF+++ +++VV+WN++I AY Q      A   F  + + GI+PD  
Sbjct: 450 SMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSS 509

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T  S+ ++    +     + V   I+R G F  D+ I NA+V M+   G + SA  +F  
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIRAG-FESDLHIRNALVSMFVNCGDLMSAMNLFND 568

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +P +D++SWNT+I G+ Q+G    A + F+MM+E   + P+Q T+  +L A +   AL +
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESG-VKPDQITFTGLLNACASPEALTE 627

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G ++HA + +  L  DV V T L+ MY KCG IDDA  +F+ +P+ +   W ++I+ +  
Sbjct: 628 GRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQ 687

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG+G +AL  F QM  EGV+PD ITFV  L+AC+H+GL+ EG  +F  M++ F I+P ++
Sbjct: 688 HGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRME 746

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HYGCMVDLFGRAG L  A  FI  M V+PD+ +WGALLGAC++H ++EL    + +  E+
Sbjct: 747 HYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLEL 806

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           D  + G YV++SNIYA  G W+ V ++R +  DRG+ K PG S IEV+ +V IF + ++T
Sbjct: 807 DPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKT 866

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP+ E+I+ EL  L  +MK LGYVPD  +VL DVE+ EKEH L  HSERLAIA+G++ +P
Sbjct: 867 HPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTP 926

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P +PI I KNLRVCGDCH  TK IS+IT+R+II RDSNRFHHFKDG+CSCGD+W
Sbjct: 927 PLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 184/626 (29%), Positives = 320/626 (51%), Gaps = 20/626 (3%)

Query: 12  RLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKRLHA 68
           RL K   L +A   L S  +  +QI             +  L Q C K   L   +R+H 
Sbjct: 78  RLSKAGQLSEAMLVLLSVDSPHIQIHRQT---------YSSLLQLCIKHKNLGDGERIHN 128

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
            +  S     +F    L++ YA  G+ + ++  FD +  ++VY+WN ++  YV+  R  E
Sbjct: 129 HIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEE 188

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
           A     Q  +  G++PD YTF  +L AC   +N+  G ++   +L  G++ D+FV  +L+
Sbjct: 189 AFRLHEQM-VQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALI 247

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           +M+ + G  + A K+F+++P RD  +W +MI+G  +     +A ++   M  EGV  D +
Sbjct: 248 NMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKV 307

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
              S+L  C   + +  G  +H  + + GL+  ++V   L++MY K G M  AL VF+ +
Sbjct: 308 AFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLV 367

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
             R+VVSW ++IA + Q      A  FF  M ++GI+P+ +T +S+    ++ +  +  R
Sbjct: 368 KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGR 427

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H  I++ G+  +D  +  A++ MYAK G +  A  VFE +  ++V++WN +IT Y Q+
Sbjct: 428 QIHDRIIKAGYITDDR-VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQH 486

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
                A+  FQ + +   I P+  T+ SIL       AL  G  + + +I+     D+ +
Sbjct: 487 EKYDNAVATFQALLK-EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHI 545

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              LV M+  CG +  AM+LF  +P    V WN II+    HG+   A ++F+ M + GV
Sbjct: 546 RNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGV 605

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +PD ITF  LL AC+    ++EG+R  H +  E  +   +     ++ ++ + G +  AH
Sbjct: 606 KPDQITFTGLLNACASPEALTEGRR-LHALITEAALDCDVVVGTGLISMYTKCGSIDDAH 664

Query: 606 NFIQNMPVRPDASIWGALLGACRIHG 631
               N+P + +   W +++     HG
Sbjct: 665 LVFHNLP-KKNVYSWTSMITGYAQHG 689



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 273/537 (50%), Gaps = 8/537 (1%)

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNL 159
           + +  +N    N+ ++   + G+LSEA+        +  ++    T+  +L+ C   +NL
Sbjct: 62  EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVD-SPHIQIHRQTYSSLLQLCIKHKNL 120

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            DG++IH  +     + D+F+   L+ MY + G  N A+++FD+MP +D  SWN ++ GY
Sbjct: 121 GDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGY 180

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q     EA  + ++M  +GV  D  T   +L  CA + N+  G  +   I+  G + +L
Sbjct: 181 VQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDL 240

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           FV   LINM+ K G +  AL+VF+ +  RD+++W S+I    +      A   F  M++ 
Sbjct: 241 FVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEE 300

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G+QPD +  VSL             + VH  +   G   E + +G A++ MY K G +  
Sbjct: 301 GVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE-IYVGTALLSMYTKCGSMED 359

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  VF  +  ++V+SW  +I G+AQ+G   EA   F  M E   I PN+ T++SIL A S
Sbjct: 360 ALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG-IEPNRVTFMSILGACS 418

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
              AL+QG +IH R+IK     D  V T L+ MY KCG + DA ++F ++ + + V WNA
Sbjct: 419 RPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNA 478

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+ +  H + D A+  F+ +L EG++PD  TF S+L  C     +  G ++   +    
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRA 537

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           G +  L     +V +F   G L  A N   +MP R D   W  ++     HG  +  
Sbjct: 538 GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQHGENQFA 593


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/742 (42%), Positives = 451/742 (60%), Gaps = 5/742 (0%)

Query: 82   STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
            S  L++ Y+  GD+  +R  FD +  ++  +W +M++ Y   G   E ++ F +  L + 
Sbjct: 266  SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325

Query: 142  LRPDFYTFPPVLKACR--NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
                       L A    +L  GK+IH   L+   + D+ VA  L+ MY + G    A++
Sbjct: 326  RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385

Query: 200  LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
            LF  +  RD  +W+A+I+   Q+G   EAL +  EM+ + +  + +T+ SILP CA    
Sbjct: 386  LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445

Query: 260  ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
            +  G  IH + VK  ++ +L     L++MYAK G    AL  F++M  RD+V+WNS+I  
Sbjct: 446  LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505

Query: 320  YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
            Y Q  DP  A   F  ++ + I PD  T+V +    A LND      +HG I++ G F  
Sbjct: 506  YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG-FES 564

Query: 380  DVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D  + NA++DMYAK G + SA  +F      KD ++WN +I  Y QNG A EAI  F  M
Sbjct: 565  DCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM 624

Query: 439  EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
               N  +PN  T+VS+LPA +++ A R+G+  HA +I+     +  V   L+DMY KCG+
Sbjct: 625  RLEN-FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQ 683

Query: 499  IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
            +  +  LF ++    +V WNA++S + +HG GD+A+  F  M +  V+ D ++FVS+L+A
Sbjct: 684  LXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSA 743

Query: 559  CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
            C H GLV EG++ FH M +++ IKP L+HY CMVDL GRAG       FI+ MPV PDA 
Sbjct: 744  CRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAG 803

Query: 619  IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
            +WGALLG+CR+H N++LG VA D L +++  N  ++V++S+IYA  G+W    + RS   
Sbjct: 804  VWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMN 863

Query: 679  DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            D GLKKTPG S +E+ NKV  F  G+++HP+ E ++     L  KM+ +GYVPD+S VLQ
Sbjct: 864  DLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQ 923

Query: 739  DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
            +VEE++KE  L SHSERLAI F ++++PP S IQI KNLRVC DCH  TKFIS+IT R I
Sbjct: 924  NVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRI 983

Query: 799  IVRDSNRFHHFKDGICSCGDYW 820
            IVRD+ RFHHF+DGICSC DYW
Sbjct: 984  IVRDATRFHHFEDGICSCNDYW 1005



 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 185/617 (29%), Positives = 309/617 (50%), Gaps = 10/617 (1%)

Query: 21  QAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVF 80
           Q  R   S A  + +         +  + +  L  SC  L+ + ++HA ++VSG  K   
Sbjct: 6   QLRRSFTSIATXASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSG-FKHHH 64

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           S T L+N Y+       +R  FD     +   WNSMI  Y R  + +EA++ +Y   +  
Sbjct: 65  SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCM-VEK 123

Query: 141 GLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           GL PD YTF  VLKAC    NL +G   H  + + G E DVF+ A L+ MY + G    A
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++FD MP RD  +WNAMI+G  QS +  EA+D    M+L GV    +++ ++ P   + 
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            NI     IH Y+ +   +F+  VSN LI++Y+K G +  A RVFDQM+++D VSW +++
Sbjct: 244 SNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y  +   +     F  M+   ++ + ++ VS     A+  D    + +HG  +++   
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQR-I 360

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             D+++   ++ MYAK G    A  +F GL  +D+++W+ +I    Q G   EA+ +FQ 
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M+   ++ PN+ T +SILPA + +  L+ G  IH   +K  +  D+   T LV MY KCG
Sbjct: 421 MQN-QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCG 479

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
               A++ F ++     V WN++I+ +   G    A++ F ++    + PD  T V ++ 
Sbjct: 480 FFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVP 539

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           AC+    + +G    H +  + G +        ++D++ + G L  A           D 
Sbjct: 540 ACALLNDLDQGT-CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDE 598

Query: 618 SIWGALLGACRIHGNME 634
             W  ++ A   +G+ +
Sbjct: 599 VTWNVIIAAYMQNGHAK 615



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 183/597 (30%), Positives = 303/597 (50%), Gaps = 16/597 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  +  F  + ++CT   +++     H  +   G  + VF    LV+ Y+ +GDL  +R 
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT----FPPVLKAC 156
            FD +  R+V  WN+MI+   +     EAVD F    L  G+ P   +    FP + K  
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV-GVEPSSVSLLNLFPGICK-L 243

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
            N+   + IH  V +  F     V+  L+ +Y + G  +VAR++FD M  +D  SW  M+
Sbjct: 244 SNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +GY  +G  VE L++ D+M+L  V ++ ++  S     A + ++  G  IH   ++  ++
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++ V+  L+ MYAK G    A ++F  +  RD+V+W++IIAA  Q+  P  A   F  M
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q   ++P+ +TL+S+    A L+  +  +S+H F ++      D+  G A+V MYAK G 
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD-MDSDLSTGTALVSMYAKCGF 480

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             +A   F  +  +D+++WN+LI GYAQ G    AI++F  +   + INP+ GT V ++P
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL-RLSAINPDAGTMVGVVP 539

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
           A + +  L QG  IH  ++K     D  V   L+DMY KCG +  A  LF +       V
Sbjct: 540 ACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV 599

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN II+ +  +G   +A++ F QM  E   P+ +TFVS+L A ++     EG   FH  
Sbjct: 600 TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHAC 658

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             + G   +      ++D++ + G L  +      M  + D   W A+L    +HG+
Sbjct: 659 IIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHK-DTVSWNAMLSGYAVHGH 714



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 163/543 (30%), Positives = 286/543 (52%), Gaps = 19/543 (3%)

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           +L+S    ++  +P +L +C++L    +IH  ++  GF+    +   L+++Y  F   ++
Sbjct: 23  SLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDL 81

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR +FD  P      WN+MI  Y +S    EAL++   M  +G+  D  T   +L  C  
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           + N+  G+  H  I + GLE ++F+   L++MY+K G ++ A  VFD+M +RDVV+WN++
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IA   QS DP  A  FF +MQ  G++P  ++L++L   + +L++    RS+HG++ RR +
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF 261

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
                 + N ++D+Y+K G ++ A  VF+ +  +D +SW T++ GYA NG   E +E+F 
Sbjct: 262 ---SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M+  N +  N+ + VS   A +    L +G +IH   ++  +  D+ VAT L+ MY KC
Sbjct: 319 KMKLGN-VRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC 377

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G  + A  LF+ +     V W+AII+     G  ++AL+ F++M ++ ++P+ +T +S+L
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            AC+   L+  G+   H    +  +   L     +V ++ + G    A      M  R D
Sbjct: 438 PACADLSLLKLGKS-IHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-D 495

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
              W +L     I+G  ++G    D    +D   + Y + +S I  + G   GV    +L
Sbjct: 496 IVTWNSL-----INGYAQIG----DPYNAID---MFYKLRLSAINPDAGTMVGVVPACAL 543

Query: 677 ARD 679
             D
Sbjct: 544 LND 546



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V +     + + T LV+ YA  G  + +  TF+ +S R++ TWNS+I+ Y + 
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G    A+D FY+  L S + PD  T   V+ AC  L D   G  IH  ++KLGFE D  V
Sbjct: 510 GDPYNAIDMFYKLRL-SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568

Query: 181 AASLLHMYCRFGLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
             +L+ MY + G    A  LF+     +D  +WN +I+ Y Q+G+A EA+    +MRLE 
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              + +T  S+LP  A       G+  H  I++ G   N  V N+LI+MYAK G + ++ 
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSE 688

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           ++F++M  +D VSWN++++ Y        A   F+ MQ++ +Q D ++ VS+ S      
Sbjct: 689 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXG 748

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
                R +   +  +     D+     +VD+  + G+ +      + +PV+ D   W  L
Sbjct: 749 LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGAL 808

Query: 419 I 419
           +
Sbjct: 809 L 809


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/780 (41%), Positives = 474/780 (60%), Gaps = 9/780 (1%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  + ++C+ +  +   K++H ++VVSG    VF +  LV  YA   +   S+  FD
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            I  RNV +WN++ S YV+     EAV  FY+  L SG++P+ ++   ++ AC  L D  
Sbjct: 217 EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSS 275

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK IH  ++KLG++WD F A +L+ MY + G    A  +F+ +   D  SWNA+I+G  
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
              +  +AL++L +M+  G+  +  T++S L  CA       G  +H  ++K  +E +LF
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           VS  L++MY+K  ++  A   F+ + E+D+++WN+II+ Y Q  + + A   F  M + G
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I  +  TL ++    A L      R VHG  ++ G F  D+ + N+++D Y K   +  A
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG-FHSDIYVVNSLIDSYGKCSHVEDA 514

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +FE   + D++S+ ++IT YAQ G   EA+++F  M++  E+ P++    S+L A ++
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM-ELKPDRFVCSSLLNACAN 573

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A  QG ++H  ++K     D+F    LV+MY KCG IDDA   F ++     V W+A+
Sbjct: 574 LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAM 633

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I     HG G +AL  F QML EGV P+HIT VS+L AC+H+GLV+E + YF  M+E FG
Sbjct: 634 IGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFG 693

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
            KP  +HY CM+DL GRAG +  A   +  MP   +AS+WGALLGA RIH ++ELG  A+
Sbjct: 694 FKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAA 753

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           + LF ++ E  G +VL++NIYA+ GKWE V EVR L RD  +KK PG S IEV +KV  F
Sbjct: 754 EMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTF 813

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+R+H + ++IY +L  L+  M   GYVP     L DVE+ EKE +L  HSE+LA+AF
Sbjct: 814 LVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAF 873

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+I++P  +PI++ KNLRVC DCH   K+I +I  REIIVRD NRFHHFKDG CSCGDYW
Sbjct: 874 GLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 172/591 (29%), Positives = 310/591 (52%), Gaps = 11/591 (1%)

Query: 48  IDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + +  L   C     ++   ++HA +  SG          L+N Y+   +  ++R   D 
Sbjct: 57  VSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDE 116

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
            S  ++ +W+++IS Y + G    A+  F++  L  G++ + +TF  VLKAC   ++L  
Sbjct: 117 SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLL-GVKCNEFTFSSVLKACSIVKDLRI 175

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK++H  V+  GFE DVFVA +L+ MY +      +++LFD++P R+  SWNA+ S Y Q
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
                EA+ +  EM L G+  +  +++S++  C    +   G +IH Y++K G +++ F 
Sbjct: 236 IDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           +N L++MYAK G +  A+ VF+++ + D+VSWN++IA          A      M+++GI
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGI 355

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
            P++ TL S     A +      R +H  +M+      D+ +   +VDMY+K  ++  A 
Sbjct: 356 CPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD-MESDLFVSVGLVDMYSKCDLLEDAR 414

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F  LP KD+I+WN +I+GY+Q     EA+ +F  M +   I  NQ T  +IL + + +
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK-EGIGFNQTTLSTILKSTAGL 473

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
             +    ++H   +K+    D++V   L+D YGKC  ++DA  +F +      V + ++I
Sbjct: 474 QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMI 533

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +  +GQG++AL  F +M D  ++PD     SLL AC++     +G++  H+   ++G 
Sbjct: 534 TAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ-LHVHILKYGF 592

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
              +     +V+++ + G +  A      +  R   S W A++G    HG+
Sbjct: 593 VLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQHGH 642



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 171/592 (28%), Positives = 283/592 (47%), Gaps = 56/592 (9%)

Query: 144 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P   ++  +L  C   ++L  G +IH  + K G   D  +   L+++Y +      ARKL
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            D+    D  SW+A+ISGY Q+G    AL    EM L GV  +  T +S+L  C+   ++
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H  +V  G E ++FV+N L+ MYAK      + R+FD++ ER+VVSWN++ + Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q +    A G F  M  +GI+P+  +L S+ +    L D    + +HG++++ G+   D
Sbjct: 234 VQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW-D 292

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
               NA+VDMYAK+G +  A +VFE +   D++SWN +I G   +    +A+E+   M+ 
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              I PN  T  S L A + +G    G ++H+ ++K  +  D+FV+  LVDMY KC  ++
Sbjct: 353 SG-ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 411

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA   F  +P    + WNAIIS +  + +  +AL+ F +M  EG+  +  T  ++L   S
Sbjct: 412 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILK--S 469

Query: 561 HSGL-VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF------------ 607
            +GL V    R  H +  + G    +     ++D +G+  H+  A               
Sbjct: 470 TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSF 529

Query: 608 ----------------------IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
                                 +Q+M ++PD  +  +LL AC       L A    +   
Sbjct: 530 TSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC-----ANLSAFEQGKQLH 584

Query: 646 VDSENVGYYV------LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           V     G+ +       + N+YA  G  +      S   +RG+     WS++
Sbjct: 585 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI---VSWSAM 633


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/775 (41%), Positives = 469/775 (60%), Gaps = 11/775 (1%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + Q C +   ++   R+ +++  SG +       KLV  Y   GDL   R  FD +S   
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGKKIH 166
           ++ WN MIS Y   G   E+++ F Q  L  G++P+ YTF  +LK   A   + +G+++H
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQM-LELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             + KLGF     V  SL+  Y        A+KLFD++  RD  SWN+MISGY ++G   
Sbjct: 275 GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNL 285
             ++I  +M + GV +D  T+ ++   CA    +L G ++H Y +K   L+  +  +N L
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY+K G +  A+RVF++M E+ VVSW S+I  Y +      A   F  M+  G+ PD+
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
             + S+ +  A   + ++ + VH +I R      +  + NA+ DMYAK G +  A  VF 
Sbjct: 455 YAVTSILNACAINGNLKSGKIVHDYI-RENNLETNSFVSNALTDMYAKCGSMKDAHDVFS 513

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  KDVISWNT+I GY +N L +EA+ +F  M+   E  P+  T   ILPA + + AL 
Sbjct: 514 HMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR--ESKPDGTTVACILPACASLAALD 571

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +G +IH   ++N    D +V   +VDMY KCG +  A SLF  +P    V W  +I+ +G
Sbjct: 572 KGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYG 631

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           +HG G +A+N F QM   G+ PD ++F+S+L ACSHSGL+ EG + F++M++E  I+P+L
Sbjct: 632 MHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNL 691

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HY CMVDL  R G+L  AH FI+ MP++PDA+IWGALL  CRIH +++L    ++R+FE
Sbjct: 692 EHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFE 751

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           ++ EN GYYVL++NIYA   KWE V ++R     RGLKK PG S IE+  K++IF  G+ 
Sbjct: 752 LEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDC 811

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
           + P+ +KI   L+ L +KMK  GY P  ++ L + +E EKE  L  HSE+LA+AFG+++ 
Sbjct: 812 SKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNL 871

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PP   I++ KNLRVCGDCH   KF+S+   REII+RDS+RFHHFKDG CSC  YW
Sbjct: 872 PPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 239/490 (48%), Gaps = 7/490 (1%)

Query: 145 DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D   +  +L+ C   +++ DG+++   +   G   D  +   L+ MY + G     R +F
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D +       WN MIS Y  SGN  E++++  +M   G+  +  T +SIL   A    + 
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +H  I K G      V N+LI+ Y     +R A ++FD++ +RDV+SWNS+I+ Y 
Sbjct: 269 EGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYV 328

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++         F  M   G+  DL T+V++    A +      + +H + ++      +V
Sbjct: 329 KNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
              N ++DMY+K G +NSA  VFE +  K V+SW ++ITGY + GL+  AI++F  M+  
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS- 447

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + P+     SIL A +  G L+ G  +H  + +N L  + FV+  L DMY KCG + D
Sbjct: 448 RGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKD 507

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F  + +   + WN +I  +  +   ++AL  F +M  E  +PD  T   +L AC+ 
Sbjct: 508 AHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACAS 566

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
              + +G R  H      G          +VD++ + G L +A +    +P + D   W 
Sbjct: 567 LAALDKG-REIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNK-DLVSWT 624

Query: 622 ALLGACRIHG 631
            ++    +HG
Sbjct: 625 VMIAGYGMHG 634



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 441 CNEINPN--QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           C+  N N   G Y SIL   +   ++R G ++ + +  + +  D  +   LV MY KCG 
Sbjct: 141 CSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGD 200

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           + +   +F ++  S    WN +IS +   G   +++N F+QML+ G++P+  TF S+L  
Sbjct: 201 LKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKC 260

Query: 559 CSHSGLVSEGQR 570
            +    V EG++
Sbjct: 261 FAAVARVEEGRQ 272


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 310/771 (40%), Positives = 473/771 (61%), Gaps = 7/771 (0%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L + CT +  + ++  L++ +G        TKLV+ ++  G ++ +   F+ I  +    
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           +++M+  Y +   L  A+  F        ++P  Y F  +LK C +  D   GK+IH  +
Sbjct: 115 YHTMLKGYAKNSSLETAL-AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 173

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +   F  +VF    +++MY +    + A K+FD MP RD  SWN +I+G+ Q+G A +AL
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 233

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +++  M+ EG   D IT+ ++LP  A    ++ G  IH Y ++ G    + +S  L +MY
Sbjct: 234 ELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMY 293

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  +FD M ++ VVSWNS++  Y Q+ +P  A   F  M + GI P  +T++
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                 A L D    + VH F+ +      D+ + N+++ MY+K   ++ A  +F  L  
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLN-LGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +  +SWN +I GYAQNG  SEA+  F  M+    + P+  T VS++PA + +   R    
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  +I++CL  ++FV T LVDMY KCG I  A  LF  +     + WNA+I  +G HG 
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G  AL+ F +M    V P+ IT++S+++ACSHSGLV EG R+F  M++++G++P + HYG
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            MVDL GRAG +  A +FI+NMP+ P  +++GA+LGAC+IH N+E+G  A+ +LFE++ +
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPD 651

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
             GY+VL++NIYA+  KW  V EVR     +GLKKTPG S +E+ N+V  FY+G+ THP+
Sbjct: 652 EGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQ 711

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            ++IY  L  L  ++K+ GYVPD + +L DVE+D +E +L SHSE+LAIAFG++++ P +
Sbjct: 712 SKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGT 770

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I + KNLRVCGDCHN TK+IS +T REIIVRD  RFHHFK+GICSCGDYW
Sbjct: 771 TIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 327/826 (39%), Positives = 482/826 (58%), Gaps = 12/826 (1%)

Query: 1   MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKL 60
           +FRLA    +  L   +     H  LFS A  SL      +  +     F  +  +C  L
Sbjct: 70  VFRLASPSNNVYLWNSIIRALTHNGLFSEAL-SLYSETQRIRLQPDTYTFPSVINACAGL 128

Query: 61  ---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
                 K +H  ++  G    ++    L++ Y    DL  +R  F+ +  R+V +WNS+I
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 188

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGF 174
           S Y   G  +EA++ +Y+F    G+ PD YT   VL+AC  L    +G  IH  + K+G 
Sbjct: 189 SGYNANGYWNEALEIYYRFR-NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGI 247

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           + DV V   LL MYC+F      R++FD M +RD+ SWN MI GY Q G   E++ +  E
Sbjct: 248 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME 307

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M +     D +T+ SIL  C    ++  G  +H Y++  G E +   SN LINMYAK G 
Sbjct: 308 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 366

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  +  VF  M  +D VSWNS+I  Y Q+     A   F  M +  ++PD +T V L S+
Sbjct: 367 LLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSM 425

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
             QL D    + +H  + + G F  ++++ N +VDMYAK G +  +  VFE +  +D+I+
Sbjct: 426 STQLGDLHLGKELHCDLAKMG-FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 484

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WNT+I     +   +  + +   M     + P+  T +SILP  S + A RQG +IH  +
Sbjct: 485 WNTIIASCVHSEDCNLGLRMISRMRT-EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI 543

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            K  L  DV V   L++MY KCG + ++  +F  +     V W A+IS  G++G+G KA+
Sbjct: 544 FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAV 603

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +M   G+ PDH+ FV+++ ACSHSGLV EG  YFH M++++ I+P ++HY C+VDL
Sbjct: 604 RAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL 663

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
             R+  L  A +FI +MP++PD+SIWGALL ACR+ G+ E+    S+R+ E++ ++ GYY
Sbjct: 664 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYY 723

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA +GKW+ V  +R   + RGLKK PG S +E+ NKV +F TG +   ++E++ 
Sbjct: 724 VLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVN 783

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  L   M   GY+ +  FVL D++EDEK  IL  HSERLAIAFG++++ P +P+Q+ 
Sbjct: 784 KLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVM 843

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC DCH  TK+IS+I +RE++VRD+NRFH FKDG CSCGDYW
Sbjct: 844 KNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 201/582 (34%), Positives = 316/582 (54%), Gaps = 18/582 (3%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWN 114
           + T+LH   +LH+L++  G   +V  S KL+  YA+  D + S   F   S   NVY WN
Sbjct: 28  TTTQLH---KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWN 84

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLK 171
           S+I      G  SEA+   Y  T    L+PD YTFP V+ AC  L+D    K IH  VL 
Sbjct: 85  SIIRALTHNGLFSEALS-LYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           +GF  D+++  +L+ MYCRF   + ARK+F++MP+RD  SWN++ISGY  +G   EAL+I
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
               R  GV  D  T++S+L  C    ++  G +IH  I K G++ ++ V+N L++MY K
Sbjct: 204 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 263

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  +    R+FD+M+ RD VSWN++I  Y Q      +   F  M     +PDLLT+ S+
Sbjct: 264 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSI 322

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
                 L D    + VH +++  G+   D    N +++MYAK G + ++  VF G+  KD
Sbjct: 323 LQACGHLGDLEFGKYVHDYMITSGYEC-DTTASNILINMYAKCGNLLASQEVFSGMKCKD 381

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWN++I  Y QNG   EA+++F+MM+   ++ P+  TYV +L   + +G L  G ++H
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFKMMK--TDVKPDSVTYVMLLSMSTQLGDLHLGKELH 439

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII-SCHGIHGQG 530
             + K     ++ V+  LVDMY KCG + D++ +F  +     + WN II SC  +H + 
Sbjct: 440 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC--VHSED 497

Query: 531 -DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            +  L    +M  EGV PD  T +S+L  CS      +G+   H    + G++  +    
Sbjct: 498 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE-IHGCIFKLGLESDVPVGN 556

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +++++ + G L  +    + M  + D   W AL+ AC ++G
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYG 597


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 325/826 (39%), Positives = 481/826 (58%), Gaps = 12/826 (1%)

Query: 1   MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKL 60
           +FRLA    +      +     H  LFS A  SL      +  +     F  +  +C  L
Sbjct: 129 VFRLASPSNNVYXWNSIIRALTHNGLFSEAL-SLYSETQRIRLQPDTYTFPSVINACAGL 187

Query: 61  ---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
                 K +H  ++  G    ++    L++ Y    DL  +R  F+ +  R+V +WNS+I
Sbjct: 188 LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 247

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGF 174
           S Y   G  +EA++ +Y+F    G+ PD YT   VL+AC  L    +G  IH  + K+G 
Sbjct: 248 SGYNANGYWNEALEIYYRFR-NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGI 306

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           + DV V   LL MYC+F      R++FD M +RD+ SWN MI GY Q G   E++ +  E
Sbjct: 307 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME 366

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M +     D +T+ SIL  C    ++  G  +H Y++  G E +   SN LINMYAK G 
Sbjct: 367 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 425

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  +  VF  M  +D VSWNS+I  Y Q+     A   F  M +  ++PD +T V L S+
Sbjct: 426 LLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSM 484

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
             QL D    + +H  + + G F  ++++ N +VDMYAK G +  +  VFE +  +D+I+
Sbjct: 485 STQLGDLXLGKELHCDLAKMG-FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT 543

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WNT+I     +   +  + +   M     + P+  T +SILP  S + A RQG +IH  +
Sbjct: 544 WNTIIASCVHSEDCNLGLRMISRMRT-EGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI 602

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            K  L  DV V   L++MY KCG + ++  +F  +     V W A+IS  G++G+G KA+
Sbjct: 603 FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAV 662

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +M   G+ PDH+ FV+++ ACSHSGLV EG  YFH M++++ I+P ++HY C+VDL
Sbjct: 663 RAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDL 722

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
             R+  L  A +FI +MP++PD+SIWGALL ACR+ G+ E+    S+R+ E++ ++ GYY
Sbjct: 723 LSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYY 782

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SN+YA +GKW+ V  +R   + RGLKK PG S +E+ NKV +F TG +   ++E++ 
Sbjct: 783 VLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVN 842

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  L   M   GY+ +  FVL D++EDEK  IL  HSERLAIAFG++++ P +P+Q+ 
Sbjct: 843 KLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVM 902

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC DCH  TK+IS+I +RE++VRD+NRFH FKDG CSCGDYW
Sbjct: 903 KNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 207/615 (33%), Positives = 327/615 (53%), Gaps = 22/615 (3%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDL---FQSCTKLHHVKRLHALLVVSGKIKTVFSS 82
           LFS    +L++  +C    SR+  F  +     S      + +LH+L++  G   +V  S
Sbjct: 55  LFSRVMKTLRVLHEC----SRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFS 110

Query: 83  TKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
            KL+  YA+  D + S   F   S   NVY WNS+I      G  SEA+   Y  T    
Sbjct: 111 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALS-LYSETQRIR 169

Query: 142 LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           L+PD YTFP V+ AC  L+D    K IH  VL +GF  D+++  +L+ MYCRF   + AR
Sbjct: 170 LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKAR 229

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           K+F++MP+RD  SWN++ISGY  +G   EAL+I    R  GV  D  T++S+L  C    
Sbjct: 230 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLG 289

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           ++  G +IH  I K G++ ++ V+N L++MY KF  +    R+FD+M+ RD VSWN++I 
Sbjct: 290 SVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMIC 349

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y Q      +   F  M     +PDLLT+ S+      L D    + VH +++  G+  
Sbjct: 350 GYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 408

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D    N +++MYAK G + ++  VF G+  KD +SWN++I  Y QNG   EA+++F+MM
Sbjct: 409 -DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMM 467

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +   ++ P+  TYV +L   + +G L  G ++H  + K     ++ V+  LVDMY KCG 
Sbjct: 468 K--TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGE 525

Query: 499 IDDAMSLFYQVPRSSSVPWNAII-SCHGIHGQG-DKALNFFRQMLDEGVRPDHITFVSLL 556
           + D++ +F  +     + WN II SC  +H +  +  L    +M  EGV PD  T +S+L
Sbjct: 526 MGDSLKVFENMKARDIITWNTIIASC--VHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 583

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
             CS      +G+   H    + G++  +     +++++ + G L  +    + M  + D
Sbjct: 584 PVCSLLAAKRQGKE-IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-D 641

Query: 617 ASIWGALLGACRIHG 631
              W AL+ AC ++G
Sbjct: 642 VVTWTALISACGMYG 656


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 309/771 (40%), Positives = 471/771 (61%), Gaps = 7/771 (0%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L + CT +  + ++  L++ +G        TKLV+ ++  G ++ +   F+ I  +    
Sbjct: 55  LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDAL 114

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           +++M+  Y +   L  A+  F        ++P  Y F  +LK C +  D   GK+IH  +
Sbjct: 115 YHTMLKGYAKNSSLETAL-AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQL 173

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +   F  +VF    +++MY +    + A K+FD MP RD  SWN +I+G+ Q+G A +AL
Sbjct: 174 ITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKAL 233

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +++  M+ EG   D IT+ ++LP  A    ++ G  IH Y ++ G    + +S  L +MY
Sbjct: 234 ELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMY 293

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  +FD M ++ VVSWNS++  Y Q+ +P  A   F  M + GI P  +T++
Sbjct: 294 SKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIM 353

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                 A L D    + VH F+ +      D+ + N+++ MY+K   ++ A  +F  L  
Sbjct: 354 EALHACADLGDLERGKFVHKFVDQLN-LGSDISVMNSLISMYSKCKRVDIASDIFNNLNG 412

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +  +SWN +I GYAQNG  SEA+  F  M+    + P+  T VS++PA + +   R    
Sbjct: 413 RTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELSVTRHAKW 471

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  +I++CL  ++FV T LVDMY KCG I  A  LF  +     + WNA+I  +G HG 
Sbjct: 472 IHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGL 531

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G  AL+ F +M    V P+ IT++S+++ACSHSGLV EG R+F  M++++G++P + HYG
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            MVDL GRAG +  A +FI+NMP+ P  +++GA  GAC+IH N+E+G  A+ +LFE++ +
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPD 651

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
             GY+VL++NIYA+  KW  V EVR     +GLKKTPG S +E+ N+V  FY+G+ THP+
Sbjct: 652 EGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQ 711

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            ++IY  L  L  ++K+ GYVPD + +L DVE+D +E +L SHSE+LAIAFG++++ P +
Sbjct: 712 SKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGT 770

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I + KNLRVCGDCHN TK+IS +T REIIVRD  RFHHFK+GICSCGDYW
Sbjct: 771 TIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 309/779 (39%), Positives = 478/779 (61%), Gaps = 12/779 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C  +  +     +H L +  G    VF    LV  YA   D++ +R  FD + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 107 YRN-VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDG 162
            RN V +WNS+IS Y   G  +EA+ C +   L +G+  + YTF   L+AC +   +  G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEAL-CLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            +IH ++LK G   DV+VA +L+ MY RFG    A  +F ++  +D  +WN+M++G+ Q+
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G   EAL+   +++   +  D +++ SI+    R   +L+G  IH Y +K+G + N+ V 
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N LI+MYAK   M +  R FD M  +D++SW +  A Y Q+   + A      +Q  G+ 
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D   + S+      LN     + +HG+ +R G  + D ++ N ++D+Y + GII+ A  
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGG--LSDPVLQNTIIDVYGECGIIDYAVR 417

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +FE +  KDV+SW ++I+ Y  NGLA++A+EVF  M+E   + P+  T VSIL A   + 
Sbjct: 418 IFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETG-LEPDYVTLVSILSAVCSLS 476

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            L++G +IH  +I+     +  ++  LVDMY +CG ++DA  +F      + + W A+IS
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMIS 536

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+HG G+ A+  F +M DE + PDHITF++LL ACSHSGLV+EG+ +  +M+ E+ ++
Sbjct: 537 AYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLE 596

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+VDL GR   L  A+  +++M   P   +W ALLGACRIH N E+G VA+++
Sbjct: 597 PWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEK 656

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E+D +N G YVL+SN++A  G+W+ V+EVR   +  GL K PG S IEV NK+  F +
Sbjct: 657 LLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLS 716

Query: 703 GNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            ++ HP+ +KIY +L  +T K+K   GYV    FVL +V E+EK  +L  HSERLAIA+G
Sbjct: 717 RDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYG 776

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++   +PI++ KNLRVCGDCH++   +S+  ERE+IVRD++RFHHFKDG+CSCGD+W
Sbjct: 777 LLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/552 (32%), Positives = 299/552 (54%), Gaps = 12/552 (2%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y   G +  +   FD +S R+++TWN+M+  YV  G    A++  Y+     G+  D Y
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALE-MYREMRHLGVSFDSY 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           TFP +LKAC    +L  G +IH   +K G +  VFV  SL+ +Y +    N ARKLFD M
Sbjct: 60  TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119

Query: 205 PVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
            VR D  SWN++IS Y  +G   EAL +  EM   GV  +  T A+ L  C  S  I  G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           + IH  I+K G   +++V+N L+ MY +FG M  A  +F  +  +D+V+WNS++  + Q+
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                A  FF  +Q A ++PD ++++S+     +L    N + +H + ++ G F  ++++
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNG-FDSNILV 298

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           GN ++DMYAK   ++     F+ +  KD+ISW T   GYAQN    +A+E+ + + +   
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL-QMEG 357

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           ++ +     SIL A   +  L +  +IH   I+  L  D  +   ++D+YG+CG ID A+
Sbjct: 358 MDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAV 416

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA-CSHS 562
            +F  +     V W ++ISC+  +G  +KAL  F  M + G+ PD++T VS+L+A CS S
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
            L    + +  ++++ F ++  + +   +VD++ R G +  A+        R +  +W A
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIFTCTKNR-NLILWTA 533

Query: 623 LLGACRIHGNME 634
           ++ A  +HG  E
Sbjct: 534 MISAYGMHGYGE 545


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 310/774 (40%), Positives = 466/774 (60%), Gaps = 9/774 (1%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           LFQ CT+L      K++   ++  G+   ++    L+  Y+  G+++ +R  FD +  + 
Sbjct: 63  LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKT 122

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           V TWN++I+ Y + G + EA   F Q  +  GL P   TF  VL AC +   L  GK++H
Sbjct: 123 VVTWNALIAGYAQVGHVKEAFALFRQM-VDEGLEPSIITFLSVLDACSSPAGLNWGKEVH 181

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V+  GF  D  +  +L+ MY + G  + AR++FD + +RD  ++N M+ GY +SG+  
Sbjct: 182 AQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWE 241

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +A ++   M+  G+  + I+  SIL  C   + +  G  +H   +  GL  ++ V+ +LI
Sbjct: 242 KAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLI 301

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY   G +  A RVFD M  RDVVSW  +I  Y ++ +   A G F TMQ+ GIQPD +
Sbjct: 302 RMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRI 361

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T + + +  A   +  ++R +H  +   G F  D+++  A+V MYAK G I  A  VF+ 
Sbjct: 362 TYMHIMNACAISANLNHAREIHSQVDIAG-FGTDLLVSTALVHMYAKCGAIKDARQVFDA 420

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +P +DV+SW+ +I  Y +NG  +EA E F +M+  N I P+  TY+++L A  H+GAL  
Sbjct: 421 MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSN-IEPDGVTYINLLNACGHLGALDV 479

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G++I+ + IK  L   V +   L+ M  K G ++ A  +F  + R   + WNA+I  + +
Sbjct: 480 GMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSL 539

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG   +AL  F +ML E  RP+ +TFV +L+ACS +G V EG+R+F  + E  GI P +K
Sbjct: 540 HGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVK 599

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
            YGCMVDL GRAG L  A   I++MPV+P +SIW +LL ACRIHGN+++   A++R   +
Sbjct: 600 LYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMI 659

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           D  +   YV +S++YA  G WE V +VR +   RG++K  G + IEV  KV  F   +R+
Sbjct: 660 DPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRS 719

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP   +IY EL  L   +K  GY+P    VL DV E +KE  ++ HSE+LAIA+G++S P
Sbjct: 720 HPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLP 779

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             +PI+I+KNLRVC DCH+ +KFIS++T REII RD++RFHHFKDG+CSCGDYW
Sbjct: 780 SGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/495 (32%), Positives = 262/495 (52%), Gaps = 13/495 (2%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I F  +  +C+    L+  K +HA +V +G +      T LV+ Y   G +  +R  FD 
Sbjct: 159 ITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDG 218

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
           +  R+V T+N M+  Y + G   +A + FY+     GL+P+  +F  +L  C     L  
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQV-GLKPNKISFLSILDGCWTPEALAW 277

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK +H   +  G   D+ VA SL+ MY   G    AR++FD+M VRD  SW  MI GY +
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +GN  +A  +   M+ EG+  D IT   I+  CA S N+     IH  +   G   +L V
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLV 397

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           S  L++MYAK G ++ A +VFD M  RDVVSW+++I AY ++     A   F  M+++ I
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNI 457

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD +T ++L +    L        ++   ++    +  V +GNA++ M AK G +  A 
Sbjct: 458 EPDGVTYINLLNACGHLGALDVGMEIYTQAIKAD-LVSHVPLGNALIIMNAKHGSVERAR 516

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSH 460
            +F+ +  +DVI+WN +I GY+ +G A EA+ +F +M++E     PN  T+V +L A S 
Sbjct: 517 YIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKE--RFRPNSVTFVGVLSACSR 574

Query: 461 VGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
            G + +G +    +++   +   V +  C+VD+ G+ G +D+A  L   +P + +S  W+
Sbjct: 575 AGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWS 634

Query: 519 AIISCHGIHGQGDKA 533
           +++    IHG  D A
Sbjct: 635 SLLVACRIHGNLDVA 649



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 202/401 (50%), Gaps = 4/401 (0%)

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           V A D+L  +   G  +D  T   +   C    +   G  +  +I++ G + N++  N L
Sbjct: 39  VGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTL 98

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I +Y+  G +  A ++FD +  + VV+WN++IA Y Q      A   F  M   G++P +
Sbjct: 99  IKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSI 158

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T +S+    +        + VH  ++  G F+ D  IG A+V MY K G ++ A  VF+
Sbjct: 159 ITFLSVLDACSSPAGLNWGKEVHAQVVTAG-FVSDFRIGTALVSMYVKGGSMDDARQVFD 217

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           GL ++DV ++N ++ GYA++G   +A E+F  M++   + PN+ +++SIL       AL 
Sbjct: 218 GLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG-LKPNKISFLSILDGCWTPEALA 276

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G  +HA+ +   L  D+ VAT L+ MY  CG I+ A  +F  +     V W  +I  + 
Sbjct: 277 WGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYA 336

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            +G  + A   F  M +EG++PD IT++ ++ AC+ S  ++   R  H   +  G    L
Sbjct: 337 ENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA-REIHSQVDIAGFGTDL 395

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
                +V ++ + G +  A      MP R D   W A++GA
Sbjct: 396 LVSTALVHMYAKCGAIKDARQVFDAMP-RRDVVSWSAMIGA 435



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 5/205 (2%)

Query: 431 AIEVFQMMEEC-NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           A +V Q + E  N I+    TYV +    + +     G ++   +I+     +++    L
Sbjct: 41  ANDVLQRLGEGGNHIDSR--TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTL 98

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           + +Y  CG + +A  +F  V   + V WNA+I+ +   G   +A   FRQM+DEG+ P  
Sbjct: 99  IKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSI 158

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           ITF+S+L ACS    ++ G+   H      G     +    +V ++ + G +  A     
Sbjct: 159 ITFLSVLDACSSPAGLNWGKE-VHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD 217

Query: 610 NMPVRPDASIWGALLGACRIHGNME 634
            + +R D S +  ++G     G+ E
Sbjct: 218 GLHIR-DVSTFNVMVGGYAKSGDWE 241


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 313/778 (40%), Positives = 462/778 (59%), Gaps = 9/778 (1%)

Query: 49  DFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           D+  L QSC K   +   K++H  ++  G    V+    L+  Y + G ++ +R  FD  
Sbjct: 46  DYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKF 105

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDG 162
           S ++V +WN MIS Y   G   EA + F       GL PD +TF  +L AC +   L  G
Sbjct: 106 SNKSVVSWNVMISGYAHRGLGQEAFNLF-TLMQQEGLEPDKFTFVSILSACSSPAALNWG 164

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           +++H  V++ G   +  V  +L+ MY + G    AR++FD M  RD  SW  +   Y +S
Sbjct: 165 REVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES 224

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G A E+L     M  EGV    IT  ++L  C     +  G  IH  IV+     ++ VS
Sbjct: 225 GYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVS 284

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             L  MY K G ++ A  VF+ +  RDV++WN++I     S     AHG F  M +  + 
Sbjct: 285 TALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVA 344

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD +T +++ S  A+       + +H   ++ G  + DV  GNA+++MY+K G +  A  
Sbjct: 345 PDRVTYLAILSACARPGGLACGKEIHARAVKDG-LVSDVRFGNALINMYSKAGSMKDARQ 403

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF+ +P +DV+SW  L+ GYA  G   E+   F+ M +   +  N+ TY+ +L A S+  
Sbjct: 404 VFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ-QGVEANKITYMCVLKACSNPV 462

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL+ G +IHA V+K  +  D+ VA  L+ MY KCG ++DA+ +   +     V WN +I 
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
               +G+G +AL  F  M  E +RP+  TFV++++AC    LV EG+R F  M++++GI 
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIV 582

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  KHY CMVD+  RAGHLG A + I  MP +P A++WGALL ACR HGN+E+G  A+++
Sbjct: 583 PTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQ 642

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
             +++ +N G YV +S IYA  G W  V ++R L ++RG+KK PG S IEV  +V  F  
Sbjct: 643 CLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVA 702

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+++HP+ E+IY EL  LT ++KSLGYVPD  FV+ D++++ KE  +  HSE+LAIA+G+
Sbjct: 703 GDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGL 762

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+PP++PI++ KNLRVC DCH  TKFIS+IT REII RD++RFHHFK+G CSCGDYW
Sbjct: 763 ISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 215/397 (54%), Gaps = 4/397 (1%)

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+L  +  +G  +D      +L  C ++ ++  G  +H +I++ G++ N+++ N L+ +Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
              G +  A R+FD+   + VVSWN +I+ Y        A   FT MQQ G++PD  T V
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S+ S  +        R VH  +M  G    +  +GNA++ MYAK G +  A  VF+ +  
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAG-LANNATVGNALISMYAKCGSVRDARRVFDAMAS 208

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +D +SW TL   YA++G A E+++ +  M +   + P++ TY+++L A   + AL +G +
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQ-EGVRPSRITYMNVLSACGSLAALEKGKQ 267

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IHA+++++    DV V+T L  MY KCG + DA  +F  +P    + WN +I      GQ
Sbjct: 268 IHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQ 327

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            ++A   F +ML E V PD +T++++L+AC+  G ++ G+   H    + G+   ++   
Sbjct: 328 LEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKE-IHARAVKDGLVSDVRFGN 386

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            +++++ +AG +  A      MP R D   W AL+G 
Sbjct: 387 ALINMYSKAGSMKDARQVFDRMPKR-DVVSWTALVGG 422


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 317/799 (39%), Positives = 483/799 (60%), Gaps = 48/799 (6%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            K++H+ L+  G     F    L++ YA   D       FD +  RN  TWNS+IS   + 
Sbjct: 296  KQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQF 355

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
            G  ++A+  F +    SG + + +    +L A   L D   G+++H  +++     D+ +
Sbjct: 356  GHFNDALVLFLRMQ-ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIIL 414

Query: 181  AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-G 239
             ++L+ MY + G+   A ++F  +  R+  S+NA+++GY Q G A EAL++  +M+ E G
Sbjct: 415  GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474

Query: 240  VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
            +  D  T  ++L +CA   N   G  IH ++++  +  N+ V   L++MY++ G + +A 
Sbjct: 475  IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534

Query: 300  RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
             +F++M ER+  SWNS+I  Y+Q+ +   A   F  MQ  GI+PD  +L S+ S    L+
Sbjct: 535  EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594

Query: 360  DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS----- 414
            D +  R +H FI+R     E+ I+   +VDMYAK G ++ A  V++    KDVI      
Sbjct: 595  DSQKGRELHNFIVRNT-MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMV 653

Query: 415  --------------------------WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
                                      WN+++ GYA  GL  E+   F  M E ++I  + 
Sbjct: 654  SAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLE-SDIEYDV 712

Query: 449  GTYVSILPAYSHVGALRQGIKIHARVIK----NCLCFDVFVATCLVDMYGKCGRIDDAMS 504
             T V+I+   S + AL  G ++H+ +IK    NC    V + T LVDMY KCG I  A +
Sbjct: 713  LTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNC---SVVLETALVDMYSKCGAITKART 769

Query: 505  LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
            +F  +   + V WNA+IS +  HG   +AL  + +M  +G+ P+ +TF+++L+ACSH+GL
Sbjct: 770  VFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGL 829

Query: 565  VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            V EG R F  MQE++ I+   +HY CMVDL GRAG L  A  F++ MP+ P+ S WGALL
Sbjct: 830  VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889

Query: 625  GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            GACR+H +M++G +A+ RLFE+D +N G YV+MSNIYA  G+W+ V+++R + + +G+KK
Sbjct: 890  GACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKK 949

Query: 685  TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ---DVE 741
             PG S IE+N+++ IF+ G++THPK E+IY+ LR+LT + K LGY+PD SF+LQ   D++
Sbjct: 950  DPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIK 1009

Query: 742  EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
            E+E+E  L  HSERLA++ G+IS P KS I++FKNLR+CGDCH  TKFIS+IT R II R
Sbjct: 1010 EEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIAR 1069

Query: 802  DSNRFHHFKDGICSCGDYW 820
            D+NRFHHF++G CSCGDYW
Sbjct: 1070 DTNRFHHFENGKCSCGDYW 1088



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 201/678 (29%), Positives = 333/678 (49%), Gaps = 49/678 (7%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHT 101
           + +  L Q C   +  +R   +H  ++ +G     +  TK++  YA  G   DL ++R  
Sbjct: 72  LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F+ +  RN+  WN+MI  Y R     E +   Y     SG   D +TFP V+KAC  + D
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLR-LYGRMRGSGNFSDKFTFPSVIKACIAMED 190

Query: 162 G---KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
               +++  SV+K G   ++FV  +L+  Y RFG  + A    D++      +WNA+I+G
Sbjct: 191 MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAG 250

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y +  +  EA  I D M   GV  D  T AS L VC    +   G  +H  ++  G + +
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FV N LI+MYAK       L+VFD+M ER+ V+WNSII+A  Q      A   F  MQ+
Sbjct: 311 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 370

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +G + +   L S+    A L D    R +HG ++ R     D+I+G+A+VDMY+K G++ 
Sbjct: 371 SGYKSNRFNLGSILMASAGLADIGKGRELHGHLV-RNLLNSDIILGSALVDMYSKCGMVE 429

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  L  ++ +S+N L+ GY Q G A EA+E++  M+  + I P+Q T+ ++L   
Sbjct: 430 EAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC 489

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           ++     QG +IHA +I+  +  ++ V T LV MY +CGR++ A  +F ++   ++  WN
Sbjct: 490 ANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWN 549

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM--- 575
           ++I  +  +G+  +AL  F+QM   G++PD  +  S+L++C       +G+   + +   
Sbjct: 550 SMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609

Query: 576 -QEEFG--------------------------IKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
             EE G                          IK  +     MV  F  +G    A N  
Sbjct: 610 TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLF 669

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL----MSNIYANV 664
             M  R + ++W ++L     + N  L   + +   E+   ++ Y VL    + N+ +++
Sbjct: 670 DQMEQR-NTALWNSILAG---YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSL 725

Query: 665 GKWEGVDEVRSLARDRGL 682
              E  D++ SL   +G 
Sbjct: 726 PALEHGDQLHSLIIKKGF 743



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 195/400 (48%), Gaps = 15/400 (3%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR---HA 298
           ++P+  +S++  C  S++   G  IH  ++ +G   + ++   ++ +YA+ G +    +A
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            ++F++M ER++ +WN++I AY + +D +     +  M+ +G   D  T  S+      +
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D    R +   +++ G    ++ +G A+VD YA+ G ++ A    + +    V++WN +
Sbjct: 189 EDMGGVRQLQSSVVKAG-LNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAV 247

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ---GIKIHARVI 475
           I GY +     EA  +F  M +   + P+  T+ S L      GALR    G ++H+++I
Sbjct: 248 IAGYVKILSWEEAWGIFDRMLKIG-VCPDNFTFASALRV---CGALRSRDGGKQVHSKLI 303

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
                 D FV   L+DMY KC   +  + +F ++   + V WN+IIS     G  + AL 
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDL 594
            F +M + G + +     S+L A +    + +G+  + H+++        L     +VD+
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILG--SALVDM 421

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           + + G +  AH   +++  R + S + ALL      G  E
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVS-YNALLAGYVQEGKAE 460


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 303/761 (39%), Positives = 454/761 (59%), Gaps = 8/761 (1%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            K +H+ +   G    V     L++ YA  GDL  +R  F  +  R++ +WN++I+ Y R 
Sbjct: 350  KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARR 409

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
                EA+  + Q   + G++P   TF  +L AC N     DGK IH  +L+ G + +  +
Sbjct: 410  EDRGEAMRLYKQMQ-SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHL 468

Query: 181  AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            A +L++MY R G    A+ +F+    RD  SWN+MI+G+ Q G+   A  +  EM+ E +
Sbjct: 469  ANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528

Query: 241  SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
              D IT AS+L  C   + +  G  IH  I + GL+ ++ + N LINMY + G ++ A  
Sbjct: 529  EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARN 588

Query: 301  VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            VF  +  RDV+SW ++I       + + A   F  MQ  G +P   T  S+  +      
Sbjct: 589  VFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSAC 648

Query: 361  CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
                + V  +I+  G+ + D  +GNA++  Y+K G +  A  VF+ +P +D++SWN +I 
Sbjct: 649  LDEGKKVIAYILNSGYEL-DTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIA 707

Query: 421  GYAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GYAQNGL   A+E  +QM E+  ++ PN+ ++VS+L A S   AL +G ++HA ++K  L
Sbjct: 708  GYAQNGLGQTAVEFAYQMQEQ--DVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKL 765

Query: 480  CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
              DV V   L+ MY KCG   +A  +F  +   + V WNA+I+ +  HG   KAL FF  
Sbjct: 766  QGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNC 825

Query: 540  MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
            M  EG++PD  TF S+L+AC+H+GLV EG + F  M+ E+G+ P ++HYGC+V L GRA 
Sbjct: 826  MEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRAR 885

Query: 600  HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
                A   I  MP  PDA++W  LLGACRIHGN+ L   A++   ++++ N   Y+L+SN
Sbjct: 886  RFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSN 945

Query: 660  IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
            +YA  G+W+ V ++R +   RG++K PG S IEV+N +  F   +R+HP+  +IY EL+ 
Sbjct: 946  VYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKR 1005

Query: 720  LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
            L+ +M+  GY PD   VL D+ +  +E  L +HSERLAIA+G+I +PP +PI+IFKNLR+
Sbjct: 1006 LSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRI 1065

Query: 780  CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            CGDCH  +KFIS++  REII RDSNRFH FK+G CSC DYW
Sbjct: 1066 CGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 191/600 (31%), Positives = 304/600 (50%), Gaps = 14/600 (2%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           ISPD    +   I+  D F + + L   KR+H L V  G    +   T LV      GD+
Sbjct: 225 ISPD----KVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             ++  F   + R+V  +N++I+   + G   EA + +Y+   + G+  +  T+  +L A
Sbjct: 281 DSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR-SDGVALNRTTYLSILNA 339

Query: 156 C---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C   + L  GK IH  + + G   DV +  +L+ MY R G    AR+LF  MP RD  SW
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISW 399

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NA+I+GY +  +  EA+ +  +M+ EGV    +T   +L  CA S     G +IH  I++
Sbjct: 400 NAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILR 459

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G++ N  ++N L+NMY + G +  A  VF+    RDV+SWNS+IA + Q     TA+  
Sbjct: 460 SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKL 519

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  MQ   ++PD +T  S+ S           + +HG I   G  + DV +GNA+++MY 
Sbjct: 520 FQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL-DVNLGNALINMYI 578

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTY 451
           + G +  A  VF  L  +DV+SW  +I G A  G   +AIE+F  M+  NE   P + T+
Sbjct: 579 RCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQ--NEGFRPVKSTF 636

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            SIL   +    L +G K+ A ++ +    D  V   L+  Y K G + DA  +F ++P 
Sbjct: 637 SSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPS 696

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V WN II+ +  +G G  A+ F  QM ++ V P+  +FVSLL ACS    + EG+R 
Sbjct: 697 RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKR- 755

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    +  ++  ++    ++ ++ + G  G A     N+ +  +   W A++ A   HG
Sbjct: 756 VHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQHG 814



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 180/613 (29%), Positives = 307/613 (50%), Gaps = 27/613 (4%)

Query: 31  ANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVN 87
           +N+ Q  P     E+    +  L Q+CT+   L   KR+HA +V +     +F S  L+N
Sbjct: 15  SNTHQPRP----TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLIN 70

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y     +  +   F  +  R+V +WNS+IS Y + G   +A   F +    +G  P+  
Sbjct: 71  MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-NAGFIPNKI 129

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T+  +L AC     L +GKKIH  ++K G++ D  V  SLL MY + G    AR++F  +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD  S+N M+  Y Q     E L +  +M  EG+S D +T  ++L        +  G 
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            IH   V+ GL  ++ V   L+ M  + G +  A + F    +RDVV +N++IAA  Q  
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHG 309

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS------VHGFIMRRGWFM 378
             + A   +  M+  G+  +  T +S+      LN C  S++      +H  I   G   
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSI------LNACSTSKALEAGKLIHSHISEDG-HS 362

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            DV IGNA++ MYA+ G +  A  +F  +P +D+ISWN +I GYA+     EA+ +++ M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +    + P + T++ +L A ++  A   G  IH  ++++ +  +  +A  L++MY +CG 
Sbjct: 423 QS-EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 481

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           + +A ++F        + WN++I+ H  HG  + A   F++M +E + PD+ITF S+L+ 
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           C +   +  G++  H    E G++  +     +++++ R G L  A N   ++  R D  
Sbjct: 542 CKNPEALELGKQ-IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVM 599

Query: 619 IWGALLGACRIHG 631
            W A++G C   G
Sbjct: 600 SWTAMIGGCADQG 612



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 167/548 (30%), Positives = 278/548 (50%), Gaps = 26/548 (4%)

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
           CG   E V   +Q   T   R    T+  +L+ C   R L + K+IH  +++     D+F
Sbjct: 7   CGPDREDVSNTHQPRPTETERA---TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIF 63

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           ++  L++MY +      A ++F +MP RD  SWN++IS Y Q G   +A  + +EM+  G
Sbjct: 64  LSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG 123

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              + IT  SIL  C     + +G  IH  I+K G + +  V N+L++MY K G +  A 
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR 183

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VF  +  RDVVS+N+++  Y Q        G F  M   GI PD +T ++L       +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                + +H   +  G    D+ +G A+V M  + G ++SA   F+G   +DV+ +N LI
Sbjct: 244 MLDEGKRIHKLTVEEG-LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALI 302

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
              AQ+G   EA E +  M   + +  N+ TY+SIL A S   AL  G  IH+ + ++  
Sbjct: 303 AALAQHGHNVEAFEQYYRMRS-DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV +   L+ MY +CG +  A  LFY +P+   + WNAII+ +       +A+  ++Q
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF---GIKPHLKHYGCMVDLFG 596
           M  EGV+P  +TF+ LL+AC++S   ++G+    M+ E+    GIK +      +++++ 
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGK----MIHEDILRSGIKSNGHLANALMNMYR 477

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF------EVDSEN 650
           R G L  A N  +    R D   W +++     HG+ E     + +LF      E++ +N
Sbjct: 478 RCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEPDN 532

Query: 651 VGYYVLMS 658
           + +  ++S
Sbjct: 533 ITFASVLS 540


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 310/761 (40%), Positives = 464/761 (60%), Gaps = 11/761 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           R++ L+  S     V     L++ +   G+L  + + F  +S R+V++WN ++  Y + G
Sbjct: 118 RVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAG 177

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
              EA++ +++  L + +RP+ YTFP VLK C  + D   GK+IH  V++ GFE DV V 
Sbjct: 178 CFDEALNLYHRM-LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVG 236

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY + G  + AR LFD MP RD  SWNAMISGY ++G  +E L++   MR   V 
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD 296

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D IT+ ++   C   DN   G  +H Y+VK     ++ ++N+LI MY+  G +  A  V
Sbjct: 297 PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETV 356

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +M  +DVVSW ++IA+      P  A   +  M+  GI PD +TLVS+ S  A +   
Sbjct: 357 FSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHL 416

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                +H   ++ G  +  VI+ N+++DMY+K   +++A  VF  +  K+V+SW +LI G
Sbjct: 417 DLGIRLHEIAIKTG-LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG 475

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
              N  + EA+  F+ M+E   + PN  T +S+L A + +GAL +G +IHA  ++  + F
Sbjct: 476 LRINNRSFEALLFFRQMKE--SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGF 533

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D F+   ++DMY +CGR   A++ F    +     WN +++ +   GQ   A+  F +ML
Sbjct: 534 DGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKML 592

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           +  + PD ITF+SLL ACS SG+V+EG  YF++M+ ++ + P+LKHY C+VD+ GRAG L
Sbjct: 593 ELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQL 652

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A++FIQ+MP+RPDA+IWGALL ACRIH N+ELG +A+ R+FE D+++VGYY+L+ N+Y
Sbjct: 653 DDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLY 712

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A  G W+ V +VRSL R+RGL   PG S +E+  KV  F +G+ +H + ++I   L    
Sbjct: 713 AGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFC 772

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
           +KMK  G+   KS    ++E    + I   HSER AIAFG+I++ P  PI + KNL +C 
Sbjct: 773 SKMKENGFGNLKSSFTSEIESSRAD-IFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCH 831

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD--YW 820
            CHN  KFIS I  REI VRD   +HHFKDG+CSCGD  YW
Sbjct: 832 SCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 254/487 (52%), Gaps = 15/487 (3%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  +  + R   +HA ++  G    V     L+  Y   GD+S +R  FD + 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP 260

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+  +WN+MIS Y   G   E ++ F      S + PD  T   V  AC  L +   G+
Sbjct: 261 KRDRISWNAMISGYFENGGGLEGLELFSMMRELS-VDPDLITMTTVASACELLDNERLGR 319

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  V+K  F  D+ +  SL+ MY   G    A  +F  M  +D  SW AMI+      
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A++    M LEG+  D IT+ S+L  CA   ++  G+ +H   +K GL  ++ VSN
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+MY+K   + +AL VF  +  ++VVSW S+I     +N    A  FF  M+++ ++P
Sbjct: 440 SLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKP 498

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TL+S+ S  A++      + +H   +R G    D  + NA++DMY + G    A   
Sbjct: 499 NSVTLISVLSACARIGALMRGKEIHAHALRTGVGF-DGFLPNAILDMYVRCGRKVPALNQ 557

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     KDV +WN L+TGYAQ G A  A+E+F  M E  EI+P++ T++S+L A S  G 
Sbjct: 558 FNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLEL-EIHPDEITFISLLCACSKSGM 615

Query: 464 LRQGIKIHARVIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
           + +G++ +  ++KN   L  ++    C+VD+ G+ G++DDA      +P R  +  W A+
Sbjct: 616 VTEGLE-YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGAL 674

Query: 521 ISCHGIH 527
           ++   IH
Sbjct: 675 LNACRIH 681



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 7/202 (3%)

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI--KNCLCFD 482
            G   +A++  + M E   I   +  Y+++L       A  +G +++  V   K+CLC  
Sbjct: 75  QGNLEQAMKRLESMLEL-RIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLC-- 131

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V +   L+ M+ + G + DA  +F ++       WN ++  +   G  D+ALN + +ML 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             +RP+  TF S+L  C+    ++ G+   H     FG +  +     ++ ++ + G + 
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKE-IHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 603 MAHNFIQNMPVRPDASIWGALL 624
            A      MP R   S W A++
Sbjct: 251 NARMLFDKMPKRDRIS-WNAMI 271


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/759 (39%), Positives = 459/759 (60%), Gaps = 8/759 (1%)

Query: 66   LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
            +H+ +   G    V     L++ YA  GDL  +R  F+ +  R++ +WN++I+ Y R   
Sbjct: 407  IHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARRED 466

Query: 126  LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAA 182
              EA+  + Q   + G++P   TF  +L AC N     DGK IH  +L+ G + +  +A 
Sbjct: 467  RGEAMKLYKQMQ-SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLAN 525

Query: 183  SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
            +L++MY R G    A+ +F+    RD  SWN+MI+G+ Q G+   A  +  EM+ EG+  
Sbjct: 526  ALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEP 585

Query: 243  DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
            D IT AS+L  C   + +  G  IH+ I++ GL+ ++ + N LINMY + G ++ A  VF
Sbjct: 586  DKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVF 645

Query: 303  DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
              +  R+V+SW ++I  +    +   A   F  MQ  G +P   T  S+           
Sbjct: 646  HSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLD 705

Query: 363  NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
              + V   I+  G+ + D  +GNA++  Y+K G +  A  VF+ +P +D++SWN +I GY
Sbjct: 706  EGKKVIAHILNSGYEL-DTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGY 764

Query: 423  AQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            AQNGL   A++  +QM E+   +  N+ ++VSIL A S   AL +G ++HA ++K  +  
Sbjct: 765  AQNGLGGTALQFAYQMQEQG--VVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQG 822

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            DV V   L+ MY KCG +++A  +F      + V WNA+I+ +  HG   KAL+FF  M 
Sbjct: 823  DVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMD 882

Query: 542  DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             EG++PD  TF S+L+AC+HSGLV EG R F  ++ + G+ P ++HYGC+V L GRAG  
Sbjct: 883  KEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRF 942

Query: 602  GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
              A   I  MP  PDA++W  LLGACRIHGN+ L   A++   ++++ N   YVL+SN+Y
Sbjct: 943  QEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVY 1002

Query: 662  ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
            A  G+W+ V ++R +   RG++K PG S IEV+N +  F   +R+HP+  +IY+EL+ L+
Sbjct: 1003 AAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLS 1062

Query: 722  AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             +M+  GY PD  +VL +++++ +E  L +HSERLAIA+G++ +PP +PI+IFKNLR+CG
Sbjct: 1063 LEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICG 1122

Query: 782  DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH  +KFIS++  REII RDSNRFH FK+G CSC D+W
Sbjct: 1123 DCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 186/613 (30%), Positives = 310/613 (50%), Gaps = 23/613 (3%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY 107
           I+  D F + + L   KR+H L V  G    +   T L   +   GD++ ++   +  + 
Sbjct: 288 INLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFAD 347

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKK 164
           R+V  +N++I+   + G   EA + +YQ   + G+  +  T+  VL AC   + L  G+ 
Sbjct: 348 RDVVVYNALIAALAQHGHYEEAFEQYYQMR-SDGVVMNRTTYLSVLNACSTSKALGAGEL 406

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  + ++G   DV +  SL+ MY R G    AR+LF+ MP RD  SWNA+I+GY +  +
Sbjct: 407 IHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARRED 466

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EA+ +  +M+ EGV    +T   +L  C  S     G +IH  I++ G++ N  ++N 
Sbjct: 467 RGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANA 526

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+NMY + G +  A  VF+    RD++SWNS+IA + Q      A+  F  M++ G++PD
Sbjct: 527 LMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPD 586

Query: 345 LLTLVSLTSIVAQLNDCRN------SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            +T  S+      L  C+N       R +H  I+  G  + DV +GNA+++MY + G + 
Sbjct: 587 KITFASV------LVGCKNPEALELGRQIHMLIIESGLQL-DVNLGNALINMYIRCGSLQ 639

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  L  ++V+SW  +I G+A  G   +A E+F  M+  +   P + T+ SIL A 
Sbjct: 640 DAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN-DGFKPVKSTFSSILKAC 698

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
                L +G K+ A ++ +    D  V   L+  Y K G + DA  +F ++P    + WN
Sbjct: 699 MSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWN 758

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +I+ +  +G G  AL F  QM ++GV  +  +FVS+L ACS    + EG+R  H    +
Sbjct: 759 KMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKR-VHAEIVK 817

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
             ++  ++    ++ ++ + G L  A     N     +   W A++ A   HG   L + 
Sbjct: 818 RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQHG---LASK 873

Query: 639 ASDRLFEVDSENV 651
           A D    +D E +
Sbjct: 874 ALDFFNCMDKEGI 886



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 305/608 (50%), Gaps = 27/608 (4%)

Query: 31  ANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVN 87
           +N+ Q  P     E+    + DL Q+CT+   L   KR+HA +V +G    +F S  L+N
Sbjct: 70  SNAYQPRP----TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLIN 125

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y     +S +   F  +  R+V +WNS+IS Y + G   +A   F +   T+G  P   
Sbjct: 126 MYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-TAGFIPSKI 184

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T+  +L AC     L  GKKIH  +++ G++ D  V  SLL+MY +      AR++F  +
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD  S+N M+  Y Q     E + +  +M  EG+  D +T  ++L        +  G 
Sbjct: 245 YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGK 304

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            IH   V  GL  ++ V   L  M+ + G +  A +  +   +RDVV +N++IAA  Q  
Sbjct: 305 RIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHG 364

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS------VHGFIMRRGWFM 378
               A   +  M+  G+      +++ T+ ++ LN C  S++      +H  I   G   
Sbjct: 365 HYEEAFEQYYQMRSDGV------VMNRTTYLSVLNACSTSKALGAGELIHSHISEVG-HS 417

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            DV IGN+++ MYA+ G +  A  +F  +P +D+ISWN +I GYA+     EA+++++ M
Sbjct: 418 SDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQM 477

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +    + P + T++ +L A ++  A   G  IH  ++++ +  +  +A  L++MY +CG 
Sbjct: 478 QS-EGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 536

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           I +A ++F        + WN++I+ H  HG  + A   F +M  EG+ PD ITF S+L  
Sbjct: 537 IMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVG 596

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           C +   +  G R  HM+  E G++  +     +++++ R G L  A+    ++  R   S
Sbjct: 597 CKNPEALELG-RQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMS 655

Query: 619 IWGALLGA 626
            W A++G 
Sbjct: 656 -WTAMIGG 662



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 153/514 (29%), Positives = 251/514 (48%), Gaps = 10/514 (1%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G   E +   YQ   T   R  +          R+L + K+IH  +++ G   D+F++  
Sbjct: 63  GSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNL 122

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L++MY +    + A ++F  MP RD  SWN++IS Y Q G   +A  + +EM+  G    
Sbjct: 123 LINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            IT  SIL  C     +  G  IH  I++ G + +  V N+L+NMY K   +  A +VF 
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFS 242

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            +  RDVVS+N+++  Y Q        G F  M   GI PD +T ++L       +    
Sbjct: 243 GIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + +H   +  G    D+ +G A+  M+ + G +  A    E    +DV+ +N LI   A
Sbjct: 303 GKRIHKLAVNEG-LNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALA 361

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q+G   EA E +  M   + +  N+ TY+S+L A S   AL  G  IH+ + +     DV
Sbjct: 362 QHGHYEEAFEQYYQMRS-DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            +   L+ MY +CG +  A  LF  +P+   + WNAII+ +       +A+  ++QM  E
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSE 480

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF---GIKPHLKHYGCMVDLFGRAGH 600
           GV+P  +TF+ LL+AC++S   S+G+    M+ E+    GIK +      +++++ R G 
Sbjct: 481 GVKPGRVTFLHLLSACTNSSAYSDGK----MIHEDILRSGIKSNGHLANALMNMYRRCGS 536

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           +  A N  +    R D   W +++     HG+ E
Sbjct: 537 IMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYE 569


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 310/761 (40%), Positives = 464/761 (60%), Gaps = 11/761 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           R++ L+  S     V     L++ +   G+L  + + F  +S R+V++WN ++  Y + G
Sbjct: 118 RVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAG 177

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
              EA++ +++  L + +RP+ YTFP VLK C  + D   GK+IH  V++ GFE DV V 
Sbjct: 178 CFDEALNLYHRM-LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVG 236

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY + G  + AR LFD MP RD  SWNAMISGY ++G  +E L++   MR   V 
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD 296

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D IT+ ++   C   DN   G  +H Y+VK     ++ ++N+LI MY+  G +  A  V
Sbjct: 297 PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETV 356

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +M  +DVVSW ++IA+      P  A   +  M+  GI PD +TLVS+ S  A +   
Sbjct: 357 FSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHL 416

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                +H   ++ G  +  VI+ N+++DMY+K   +++A  VF  +  K+V+SW +LI G
Sbjct: 417 DLGIRLHEIAIKTG-LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG 475

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
              N  + EA+  F+ M+E   + PN  T +S+L A + +GAL +G +IHA  ++  + F
Sbjct: 476 LRINNRSFEALLFFRQMKE--SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGF 533

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D F+   ++DMY +CGR   A++ F    +     WN +++ +   GQ   A+  F +ML
Sbjct: 534 DGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKML 592

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           +  + PD ITF+SLL ACS SG+V+EG  YF++M+ ++ + P+LKHY C+VD+ GRAG L
Sbjct: 593 ELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQL 652

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A++FIQ+MP+RPDA+IWGALL ACRIH N+ELG +A+ R+FE D+++VGYY+L+ N+Y
Sbjct: 653 DDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLY 712

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A  G W+ V +VRSL R+RGL   PG S +E+  KV  F +G+ +H + ++I   L    
Sbjct: 713 AGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFC 772

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
           +KMK  G+   KS    ++E    + I   HSER AIAFG+I++ P  PI + KNL +C 
Sbjct: 773 SKMKENGFGNLKSSFTSEIESSRAD-IFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCH 831

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD--YW 820
            CHN  KFIS I  REI VRD   +HHFKDG+CSCGD  YW
Sbjct: 832 SCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 254/487 (52%), Gaps = 15/487 (3%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  +  + R   +HA ++  G    V     L+  Y   GD+S +R  FD + 
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP 260

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+  +WN+MIS Y   G   E ++ F      S + PD  T   V  AC  L +   G+
Sbjct: 261 KRDRISWNAMISGYFENGGGLEGLELFSMMRELS-VDPDLITMTTVASACELLDNERLGR 319

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  V+K  F  D+ +  SL+ MY   G    A  +F  M  +D  SW AMI+      
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A++    M LEG+  D IT+ S+L  CA   ++  G+ +H   +K GL  ++ VSN
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+MY+K   + +AL VF  +  ++VVSW S+I     +N    A  FF  M+++ ++P
Sbjct: 440 SLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKP 498

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TL+S+ S  A++      + +H   +R G    D  + NA++DMY + G    A   
Sbjct: 499 NSVTLISVLSACARIGALMRGKEIHAHALRTGVGF-DGFLPNAILDMYVRCGRKVPALNQ 557

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     KDV +WN L+TGYAQ G A  A+E+F  M E  EI+P++ T++S+L A S  G 
Sbjct: 558 FNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLEL-EIHPDEITFISLLCACSKSGM 615

Query: 464 LRQGIKIHARVIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
           + +G++ +  ++KN   L  ++    C+VD+ G+ G++DDA      +P R  +  W A+
Sbjct: 616 VTEGLE-YFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGAL 674

Query: 521 ISCHGIH 527
           ++   IH
Sbjct: 675 LNACRIH 681



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 7/202 (3%)

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI--KNCLCFD 482
            G   +A++  + M E   I   +  Y+++L       A  +G +++  V   K+CLC  
Sbjct: 75  QGNLEQAMKRLESMLEL-RIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLC-- 131

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V +   L+ M+ + G + DA  +F ++       WN ++  +   G  D+ALN + +ML 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             +RP+  TF S+L  C+    ++ G+   H     FG +  +     ++ ++ + G + 
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKE-IHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 603 MAHNFIQNMPVRPDASIWGALL 624
            A      MP R   S W A++
Sbjct: 251 NARMLFDKMPKRDRIS-WNAMI 271


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 308/766 (40%), Positives = 480/766 (62%), Gaps = 9/766 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN-VYTWNSMIS 118
           +H    +H L++  G    VF +  LV+ YA   D+  +R  FD ++ RN V +WNS+IS
Sbjct: 26  IHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIIS 85

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFE 175
            Y   G+  EA+  F +    +G+  + YT    L+AC +      G +IH ++LK    
Sbjct: 86  AYSLNGQCMEALGLFREMQ-KAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQV 144

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            DV+VA +L+ M+ RFG  + A ++FD++  +D+ +WN+MI+G+ Q+G   EAL     +
Sbjct: 145 LDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGL 204

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           +   +  D +++ SIL    R   +L+G  IH Y +K+ L+ NL + N LI+MY+K   +
Sbjct: 205 QDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCV 264

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
            +A  VFD+M+ +D++SW ++IAAY Q+N    A      +Q  G+  D + + S     
Sbjct: 265 AYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLAC 324

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           + L    +++ VHG+ ++RG  + D+++ N ++D+YA  G IN A  +FE +  KDV+SW
Sbjct: 325 SGLRCLSHAKEVHGYTLKRG--LSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSW 382

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            ++I+ Y  NGLA+EA+ VF +M+E   + P+  T VSIL A + + AL +G +IH  + 
Sbjct: 383 TSMISCYVHNGLANEALGVFYLMKE-TSVEPDSITLVSILSAAASLSALNKGKEIHGFIF 441

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           +     +      LVDMY  CG +++A  +F      S V W  +I+ +G+HG+G  A+ 
Sbjct: 442 RKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVE 501

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F  M D+ + PDHITF++LL ACSHSGL++EG+R    M+ ++ ++P  +HY C+VDL 
Sbjct: 502 LFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLL 561

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           GRA HL  A++F+++M + P A +W A LGACRIH N +LG +A+ +L ++D ++ G YV
Sbjct: 562 GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYV 621

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SN++A  G+W+ V+EVR   +  GLKK PG S IEV NKV  F   +++HP+  KIY 
Sbjct: 622 LISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQ 681

Query: 716 ELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
           +L  +T K+ K  GYVP    VL +V ++EK  +L  HSERLAIA+G++S+   +PI+I 
Sbjct: 682 KLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRIT 741

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC DCH + K +S+  ERE+IVRD++RFHHF+DG+CSCGD+W
Sbjct: 742 KNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/511 (31%), Positives = 274/511 (53%), Gaps = 15/511 (2%)

Query: 141 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G+  D +TFP VLKAC  + D   G +IH  ++K G++  VFVA SL+ MY +      A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 198 RKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           RKLFD M  R D  SWN++IS Y  +G  +EAL +  EM+  GV  +  T+ + L  C  
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S     G+ IH  I+K     +++V+N L+ M+ +FG M +A R+FD++ E+D ++WNS+
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IA + Q+     A  FF  +Q A ++PD ++L+S+ +   +L    N + +H + M+  W
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN-W 243

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              ++ IGN ++DMY+K   +  A  VF+ +  KD+ISW T+I  YAQN   +EA+++ +
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            ++    ++ +     S L A S +  L    ++H   +K  L  D+ +   ++D+Y  C
Sbjct: 304 KVQT-KGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADC 361

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G I+ A  +F  +     V W ++ISC+  +G  ++AL  F  M +  V PD IT VS+L
Sbjct: 362 GNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSIL 421

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +A +    +++G+   H      G          +VD++   G L  A+     +  R  
Sbjct: 422 SAAASLSALNKGKE-IHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF--ICTRSK 478

Query: 617 ASI-WGALLGACRIHGN----MELGAVASDR 642
           + + W  ++ A  +HG     +EL ++  D+
Sbjct: 479 SLVLWTTMINAYGMHGRGKAAVELFSIMEDQ 509



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 217/406 (53%), Gaps = 19/406 (4%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           MR+ GV  D  T   +L  C   ++I  G  IH  I+K G +  +FV+N+L++MYAK   
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 295 MRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
           +  A ++FD+M ER DVVSWNSII+AY  +   + A G F  MQ+AG+  +  TL     
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTL----- 115

Query: 354 IVAQLNDCRNSR------SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
            VA L  C +S        +H  I++    + DV + NA+V M+ + G ++ A  +F+ L
Sbjct: 116 -VAALQACEDSSFKKLGMEIHAAILKSNQVL-DVYVANALVAMHVRFGKMSYAARIFDEL 173

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             KD I+WN++I G+ QNGL +EA++ F  +++ N + P++ + +SIL A   +G L  G
Sbjct: 174 DEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDAN-LKPDEVSLISILAASGRLGYLLNG 232

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            +IHA  +KN L  ++ +   L+DMY KC  +  A  +F ++     + W  +I+ +  +
Sbjct: 233 KEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQN 292

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
               +AL   R++  +G+  D +   S L ACS    +S  +   H    + G+   L  
Sbjct: 293 NCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKE-VHGYTLKRGLSD-LMM 350

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
              ++D++   G++  A    +++  + D   W +++ +C +H  +
Sbjct: 351 QNMIIDVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNGL 394


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 307/779 (39%), Positives = 469/779 (60%), Gaps = 15/779 (1%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  SC ++  ++    +H   +  G    ++    L++ Y+   DL  +R+ F+ +S
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            R+  +WNS+IS Y   G   +A+D +++F +T G+ PD +T   VL AC +L+   +G 
Sbjct: 184 NRDSVSWNSLISGYCSNGFWEDALDMYHKFRMT-GMVPDCFTMSSVLLACGSLMAVKEGV 242

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  + K+G   DV +   LL MY +F     AR++F  M V+DS +WN MI GY Q G
Sbjct: 243 AVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLG 302

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               ++ +  +M ++G   D +++ S +  C +S ++  G  +H Y++  G E +    N
Sbjct: 303 RHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN 361

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G +  A  VFD    +D V+WNS+I  Y QS         F  M+    +P
Sbjct: 362 ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KP 420

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T V L SI +QL D    R +H  +++ G F  ++IIGN+++D+YAK G ++    V
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFG-FEAELIIGNSLLDVYAKCGEMDDLLKV 479

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE--INPNQGTYVSILPAYSHV 461
           F  +   D+ISWNT+I   A +    +    FQM+ E     + P++ T + ILP  S +
Sbjct: 480 FSYMSAHDIISWNTVI---ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLL 536

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
              RQG +IH  + K+    +V +   L++MY KCG +++ + +F  +     V W A+I
Sbjct: 537 AVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALI 596

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S  G++G+G KAL  F+ M   GV PD + F++ + ACSHSG+V EG R+F  M+ ++ +
Sbjct: 597 SAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNL 656

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P ++HY C+VDL  R+G L  A  FI +MP++PDAS+WGALL ACR  GN  +    S 
Sbjct: 657 EPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSK 716

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           ++ E++S++ GYYVL+SNIYA +GKW+ V  VR+  + +GLKK PG S IE+  +V +F 
Sbjct: 717 KILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFR 776

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
           TG+++  +Y+K+ D L  L   M   GYV D  F L DVEED+K  +L  HSERLAIAFG
Sbjct: 777 TGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFG 836

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++ P SP+ + KNLRVCGDCH  TK+I++I +REI+VRD+NRFH FKDG CSCGD+W
Sbjct: 837 LLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 186/604 (30%), Positives = 310/604 (51%), Gaps = 21/604 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYT 112
             S      ++ +H+L++ SG   +V  S KL++ YA + D   S   F  IS   NVY 
Sbjct: 29  LSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYL 88

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WNS+I      G  ++A+  +Y       L+PD +TFP V+ +C  ++D   G  +H   
Sbjct: 89  WNSIIRALTHNGLFTQALG-YYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHA 147

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +++GFE D+++  +L+ MY RF   + AR +F++M  RDS SWN++ISGYC +G   +AL
Sbjct: 148 MEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDAL 207

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+  + R+ G+  D  T++S+L  C     +  G+ +H  I K G+  ++ + N L++MY
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMY 267

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            KF  +R A RVF +M  +D V+WN++I  Y Q      +   F  M   G  PD+L++ 
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSIT 326

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S      Q  D +  + VH +++  G F  D +  N ++DMYAK G + +A  VF+    
Sbjct: 327 STIRACGQSGDLQVGKFVHKYLIGSG-FECDTVACNILIDMYAKCGDLLAAQEVFDTTKC 385

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD ++WN+LI GY Q+G   E +E F+MM+   E  P+  T+V +L  +S +  + QG  
Sbjct: 386 KDSVTWNSLINGYTQSGYYKEGLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRG 443

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  VIK     ++ +   L+D+Y KCG +DD + +F  +     + WN +I+       
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
                    +M  EG+ PD  T + +L  CS   +  +G+   H    + G + ++    
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE-IHGYIFKSGFESNVPIGN 562

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG----------NMELGAVA 639
            +++++ + G L       + M  + D   W AL+ A  ++G          +MEL  V 
Sbjct: 563 ALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFGMYGEGKKALKAFQDMELSGVL 621

Query: 640 SDRL 643
            D +
Sbjct: 622 PDSV 625


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/760 (40%), Positives = 452/760 (59%), Gaps = 6/760 (0%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H   + +G +  V  +  ++N YA  G +  +R  FD +  ++V +W   I  Y  C
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADC 205

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           GR   A + F +     G+ P+  T+  VL A  +   L  GK +H  +L  G E D  V
Sbjct: 206 GRSETAFEIFQKME-QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAV 264

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY + G     R++F+ +  RD  +WN MI G  + G   EA ++ ++M+ EGV
Sbjct: 265 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGV 324

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + IT   +L  C  S  +  G  IH  + K G   ++ V N LI+MY++ G ++ A  
Sbjct: 325 MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARL 384

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD+M+ +DV+SW ++I    +S     A   +  MQQAG++P+ +T  S+ +  +    
Sbjct: 385 VFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAA 444

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H  ++  G    D  +GN +V+MY+  G +  A  VF+ +  +D++++N +I 
Sbjct: 445 LEWGRRIHQQVVEAG-LATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIG 503

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GYA + L  EA+++F  ++E   + P++ TY+++L A ++ G+L    +IH  V K    
Sbjct: 504 GYAAHNLGKEALKLFDRLQE-EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFF 562

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  V   LV  Y KCG   DA  +F ++ + + + WNAII     HG+G  AL  F +M
Sbjct: 563 SDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERM 622

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
             EGV+PD +TFVSLL+ACSH+GL+ EG+RYF  M ++F I P ++HYGCMVDL GRAG 
Sbjct: 623 KMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQ 682

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   I+ MP + +  IWGALLGACRIHGN+ +   A++   ++D +N   YV +S++
Sbjct: 683 LDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHM 742

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA  G W+   ++R L   RG+ K PG S I+V +K+  F   +R+HP+ EKIY EL  L
Sbjct: 743 YAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRL 802

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
           T  MK  GYVPD   V+ DV+E EKE+ +  HSERLAIA+G+IS+PP + I IFKNLRVC
Sbjct: 803 THAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVC 862

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH  TKFIS+I +REII RD NRFHHFKDG+CSCGDYW
Sbjct: 863 PDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  305 bits (782), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 181/597 (30%), Positives = 308/597 (51%), Gaps = 25/597 (4%)

Query: 49  DFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           D+  + + C ++  +   +++H  ++    +   ++   L+N Y   G +  +R  +  +
Sbjct: 25  DYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKL 84

Query: 106 SY--RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
           SY  R V++WN+M+  Y++ G + +A+    Q     GL PD  T    L +C++   L 
Sbjct: 85  SYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQ-QHGLAPDRTTIMSFLSSCKSPGALE 143

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++IH   ++ G  +DV VA  +L+MY + G    AR++FD M  +   SW   I GY 
Sbjct: 144 WGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYA 203

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
             G +  A +I  +M  EGV  + IT  S+L   +    +  G  +H  I+  G E +  
Sbjct: 204 DCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTA 263

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V   L+ MYAK G  +   +VF++++ RD+++WN++I    +      A   +  MQ+ G
Sbjct: 264 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG 323

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNS------RSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           + P+ +T V L      LN C NS      + +H  + + G F  D+ + NA++ MY++ 
Sbjct: 324 VMPNKITYVIL------LNACVNSAALHWGKEIHSRVAKAG-FTSDIGVQNALISMYSRC 376

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  A  VF+ +  KDVISW  +I G A++G  +EA+ V+Q M++   + PN+ TY SI
Sbjct: 377 GSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG-VEPNRVTYTSI 435

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S   AL  G +IH +V++  L  D  V   LV+MY  CG + DA  +F ++ +   
Sbjct: 436 LNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDI 495

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V +NA+I  +  H  G +AL  F ++ +EG++PD +T++++L AC++SG + E  R  H 
Sbjct: 496 VAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL-EWAREIHT 554

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +  + G          +V  + + G    A    + M  R   S W A++G    HG
Sbjct: 555 LVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVIS-WNAIIGGSAQHG 610



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 201/401 (50%), Gaps = 6/401 (1%)

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A+D++  ++ +G  ++      +L  C    ++++G  +H +I++H    + +  N LIN
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 288 MYAKFGMMRHALRVFDQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           MY + G +  A +V+ ++  MER V SWN+++  Y Q      A      MQQ G+ PD 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T++S  S           R +H   M+ G  + DV + N +++MYAK G I  A  VF+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAG-LLFDVKVANCILNMYAKCGSIEEAREVFD 185

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  K V+SW   I GYA  G +  A E+FQ ME+   + PN+ TY+S+L A+S   AL+
Sbjct: 186 KMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQ-EGVVPNRITYISVLNAFSSPAALK 244

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G  +H+R++      D  V T LV MY KCG   D   +F ++     + WN +I    
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
             G  ++A   + QM  EGV P+ IT+V LL AC +S  +  G+   H    + G    +
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKE-IHSRVAKAGFTSDI 363

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
                ++ ++ R G +  A      M VR D   W A++G 
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGG 403



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 20/188 (10%)

Query: 47  EIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           ++ + ++  +C     L   + +H L+   G          LV+ YA  G  S +   F+
Sbjct: 530 KVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFE 589

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            ++ RNV +WN++I    + GR  +A+  F +  +  G++PD  TF  +L AC +   L 
Sbjct: 590 KMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKM-EGVKPDIVTFVSLLSACSHAGLLE 648

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWN 213
           +G++  CS+ +     D  +  ++ H  C      R G  + A  L   MP + ++  W 
Sbjct: 649 EGRRYFCSMSQ-----DFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWG 703

Query: 214 AMISGYCQ 221
           A++ G C+
Sbjct: 704 ALL-GACR 710


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 314/780 (40%), Positives = 458/780 (58%), Gaps = 13/780 (1%)

Query: 49  DFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           D+  L QSC K   +   K++H  ++  G    V+ +  L+  YA+ G ++ +R  FD  
Sbjct: 30  DYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKF 89

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG--LRPDFYTFPPVLKACRN---LV 160
           S ++V +WN MIS Y   G   EA   F  FTL     L PD +TF  +L AC +   L 
Sbjct: 90  SNKSVVSWNVMISGYAHRGLAQEA---FNLFTLMQQERLEPDKFTFVSILSACSSPAVLN 146

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++IH  V++ G   D  V  +L+ MY + G    AR++FD M  RD  SW  +   Y 
Sbjct: 147 WGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 206

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           +SG   E+L     M  E V    IT  ++L  C     +  G  IH +IV+     ++ 
Sbjct: 207 ESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVR 266

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           VS  L  MY K G  + A  VF+ +  RDV++WN++I  +  S     AHG F  M + G
Sbjct: 267 VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           + PD  T  ++ S  A+       + +H    + G  + DV  GNA+++MY+K G +  A
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDG-LVSDVRFGNALINMYSKAGSMKDA 385

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF+ +P +DV+SW TL+  YA      E+   F+ M +   +  N+ TY+ +L A S+
Sbjct: 386 RQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ-QGVKANKITYMCVLKACSN 444

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
             AL+ G +IHA V+K  L  D+ V   L+ MY KCG ++DA+ +F  +     V WN +
Sbjct: 445 PVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTL 504

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I   G +G+G +AL  +  M  EG+RP+  TFV++L+AC    LV EG+R F  M +++G
Sbjct: 505 IGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYG 564

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I P  KHY CMVD+  RAGHL  A + I  +P++P A++WGALL ACRIH N+E+G  A+
Sbjct: 565 IVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAA 624

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +   +++ +N G YV +S IYA  G W  V ++R   ++RG+KK PG S IE+  +V  F
Sbjct: 625 EHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSF 684

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
              +++HP+ ++IY EL  L  +MKSLGYVPD  FV+ D++++ KE  +  HSE+LAIA+
Sbjct: 685 VARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAY 744

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+IS+PP +PI+I KNLRVC DCH  TKFIS+IT+REII RD++RFHHFK+G CSCGDYW
Sbjct: 745 GLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 211/396 (53%), Gaps = 4/396 (1%)

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+L  +  +G  +D      +L  C ++ ++  G  +H +I++ G++ N++++N L+ +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           A  G +  A ++FD+   + VVSWN +I+ Y        A   FT MQQ  ++PD  T V
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S+ S  +        R +H  +M  G    D  +GNA++ MYAK G +  A  VF+ +  
Sbjct: 134 SILSACSSPAVLNWGREIHVRVMEAG-LANDTTVGNALISMYAKCGSVRDARRVFDAMAS 192

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +D +SW TL   YA++G   E+++ +  M +   + P++ TY+++L A   + AL +G +
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQ-ERVRPSRITYMNVLSACGSLAALEKGKQ 251

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IHA ++++    DV V+T L  MY KCG   DA  +F  +     + WN +I      GQ
Sbjct: 252 IHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQ 311

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            ++A   F +ML+EGV PD  T+ ++L+AC+  G ++ G+   H    + G+   ++   
Sbjct: 312 LEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKE-IHARAAKDGLVSDVRFGN 370

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            +++++ +AG +  A      MP R D   W  LLG
Sbjct: 371 ALINMYSKAGSMKDARQVFDRMPKR-DVVSWTTLLG 405


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 313/809 (38%), Positives = 471/809 (58%), Gaps = 21/809 (2%)

Query: 15   KLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSG 74
            KLL  +Q H  L    A ++++   C    + E         C +  HV+ + A L+   
Sbjct: 230  KLLREMQQH-GLALGRATTMRLLSSCKSPSALE---------CGREIHVEAMKARLLFDV 279

Query: 75   KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
             +        ++N YA  G +  +R  FD +  ++V +W  +I  Y  CG    A + F 
Sbjct: 280  NVANC-----ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIF- 333

Query: 135  QFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
            Q     G+ P+  T+  VL A      L  GK +H  +L  G E D+ V  +L+ MY + 
Sbjct: 334  QKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKC 393

Query: 192  GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
            G     R++F+ +  RD  +WN MI G  + GN  EA +I  +M+ EG+  + IT   +L
Sbjct: 394  GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILL 453

Query: 252  PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
              C     +  G  IH  +VK G  F++ V N LI+MYA+ G ++ A  +F++M+ +D++
Sbjct: 454  NACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDII 513

Query: 312  SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
            SW ++I    +S     A   F  MQQAG++P+ +T  S+ +  +        R +H  +
Sbjct: 514  SWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV 573

Query: 372  MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
            +  G    D  + N +V+MY+  G +  A  VF+ +  +D++++N +I GYA + L  EA
Sbjct: 574  IEAG-LATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEA 632

Query: 432  IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
            +++F  ++E   + P++ TY+++L A ++ G+L    +IH+ V+K+    D  +   LV 
Sbjct: 633  LKLFDRLQE-EGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVS 691

Query: 492  MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
             Y KCG   DA+ +F ++ + + + WNAII     HG+G   L  F +M  EG++PD +T
Sbjct: 692  TYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVT 751

Query: 552  FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
            FVSLL+ACSH+GL+ EG+RYF  M  +FGI P ++HYGCMVDL GRAG L      I+ M
Sbjct: 752  FVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTM 811

Query: 612  PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
            P + +  IWGALLGACRIHGN+ +   A++   ++D +N   YV +S++YA  G W+   
Sbjct: 812  PFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAA 871

Query: 672  EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            ++R L   RG+ K PG S IEV +K+  F   +R+HP+ EKIY EL  LT  MK  GYVP
Sbjct: 872  KLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVP 931

Query: 732  DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
            D   V+ DV+E EKE+ +  HSERLAIA+G+IS+ P +PI+IFKNLRVC DCH  TKFI+
Sbjct: 932  DTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFIT 991

Query: 792  QITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +I +REI+ RD NRFHHFKDG+CSCGDYW
Sbjct: 992  KIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 182/597 (30%), Positives = 315/597 (52%), Gaps = 25/597 (4%)

Query: 49  DFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           D+  + + C ++  +   + +H  ++    +   ++   L+N Y   G +  +R  ++ +
Sbjct: 143 DYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKL 202

Query: 106 SY--RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
           ++  R V++WN+M+  YV+ G + EA+    +     GL     T   +L +C++   L 
Sbjct: 203 NHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQ-QHGLALGRATTMRLLSSCKSPSALE 261

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++IH   +K    +DV VA  +L+MY + G  + AR++FD M  +   SW  +I GY 
Sbjct: 262 CGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYA 321

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
             G++  A +I  +M+ EGV  + IT  ++L   +    +  G  +H +I+  G E +L 
Sbjct: 322 DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLA 381

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V   L+ MYAK G  +   +VF++++ RD+++WN++I    +  +   A   +  MQ+ G
Sbjct: 382 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREG 441

Query: 341 IQPDLLTLVSLTSIVAQLNDCRN------SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           + P+ +T V L      LN C N       R +H  +++ G FM D+ + NA++ MYA+ 
Sbjct: 442 MMPNKITYVIL------LNACVNPTALHWGREIHSRVVKDG-FMFDISVQNALISMYARC 494

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  A  +F  +  KD+ISW  +I G A++GL +EA+ VFQ M++   + PN+ TY SI
Sbjct: 495 GSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG-LKPNRVTYTSI 553

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S   AL  G +IH +VI+  L  D  VA  LV+MY  CG + DA  +F ++ +   
Sbjct: 554 LNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDI 613

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V +NA+I  +  H  G +AL  F ++ +EG++PD +T++++L AC++SG + E  +  H 
Sbjct: 614 VAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL-EWAKEIHS 672

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +  + G          +V  + + G    A      M  R   S W A++G C  HG
Sbjct: 673 LVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVIS-WNAIIGGCAQHG 728



 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 177/554 (31%), Positives = 279/554 (50%), Gaps = 12/554 (2%)

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           Q+    G R +   +  +LK C   ++LV G+++H  +++     D +   +L++MY + 
Sbjct: 130 QYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQC 189

Query: 192 GLANVARKLFDDM--PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           G    AR++++ +    R   SWNAM+ GY Q G   EAL +L EM+  G+++   T   
Sbjct: 190 GSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMR 249

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  C     +  G  IH+  +K  L F++ V+N ++NMYAK G +  A  VFD+M  + 
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS 309

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VVSW  II  Y        A   F  MQQ G+ P+ +T +++ +  +     +  ++VH 
Sbjct: 310 VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHS 369

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            I+  G    D+ +G A+V MYAK G       VFE L  +D+I+WNT+I G A+ G   
Sbjct: 370 HILNAG-HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWE 428

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA E++  M+    + PN+ TYV +L A  +  AL  G +IH+RV+K+   FD+ V   L
Sbjct: 429 EASEIYHQMQR-EGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNAL 487

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           + MY +CG I DA  LF ++ R   + W A+I      G G +AL  F+ M   G++P+ 
Sbjct: 488 ISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNR 547

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           +T+ S+L ACS    +  G+R  H    E G+         +V+++   G +  A     
Sbjct: 548 VTYTSILNACSSPAALDWGRR-IHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFD 606

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKW 667
            M  R D   + A++G    H   +      DRL E  +  + V  Y+ M N  AN G  
Sbjct: 607 RMTQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKV-TYINMLNACANSGSL 664

Query: 668 EGVDEVRSLARDRG 681
           E   E+ SL    G
Sbjct: 665 EWAKEIHSLVLKDG 678



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 204/414 (49%), Gaps = 9/414 (2%)

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A+D++  ++ +G  ++      +L  C    ++++G  +H +I++H    + +  N LIN
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184

Query: 288 MYAKFGMMRHALRVFDQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           MY + G +  A +V++++   ER V SWN+++  Y Q      A      MQQ G+    
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T + L S     +     R +H   M +   + DV + N +++MYAK G I+ A  VF+
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAM-KARLLFDVNVANCILNMYAKCGSIHEAREVFD 303

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  K V+SW  +I GYA  G +  A E+FQ M++   + PN+ TY+++L A+S   AL+
Sbjct: 304 KMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQ-EGVVPNRITYINVLNAFSGPAALK 362

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G  +H+ ++      D+ V T LV MY KCG   D   +F ++     + WN +I    
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
             G  ++A   + QM  EG+ P+ IT+V LL AC +   +  G R  H    + G    +
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWG-REIHSRVVKDGFMFDI 481

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
                ++ ++ R G +  A      M VR D   W A++G     G   LGA A
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGGLAKSG---LGAEA 531


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/774 (39%), Positives = 464/774 (59%), Gaps = 9/774 (1%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           LFQ C  L      K++   ++ SG+   ++    L+  ++  G++  +R TFD +  + 
Sbjct: 67  LFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKT 126

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           V TWN++I+ Y + G + EA   F Q  +   + P   TF  VL AC +   L  GK+ H
Sbjct: 127 VVTWNAIIAGYAQLGHVKEAFALFRQM-VDEAMEPSIITFLIVLDACSSPAGLKLGKEFH 185

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V+K+GF  D  +  +L+ MY + G  + AR++FD +  RD  ++N MI GY +SG+  
Sbjct: 186 AQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGE 245

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +A  +   M+ EG   + I+  SIL  C+  + +  G  +H   +  GL  ++ V+  LI
Sbjct: 246 KAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALI 305

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY   G +  A RVFD+M  RDVVSW  +I  Y ++++   A G F TMQ+ GIQPD +
Sbjct: 306 RMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRI 365

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T + + +  A   D   +R +H  ++R G F  D+++  A+V MYAK G I  A  VF+ 
Sbjct: 366 TYIHIINACASSADLSLAREIHSQVVRAG-FGTDLLVDTALVHMYAKCGAIKDARQVFDA 424

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  +DV+SW+ +I  Y +NG   EA E F +M+  N + P+  TY+++L A  H+GAL  
Sbjct: 425 MSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKR-NNVEPDVVTYINLLNACGHLGALDL 483

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G++I+ + IK  L   + V   L++M  K G I+ A  +F  + +   V WN +I  + +
Sbjct: 484 GMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSL 543

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG   +AL+ F +ML E  RP+ +TFV +L+ACS +G V EG+R+F  + +  GI P ++
Sbjct: 544 HGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTME 603

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
            YGCMVDL GRAG L  A   I  MP++P++SIW  LL ACRI+GN+++   A++R    
Sbjct: 604 LYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMS 663

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           +  +   YV +S++YA  G WE V +VR +   RG++K  G + IEV  K+  F   +R+
Sbjct: 664 EPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRS 723

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP+  +IY EL  L   +K  GY+P    VL +V E EKE  ++ HSE+LAIA+G++S P
Sbjct: 724 HPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLP 783

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             +PI+IFKNLRVCGDCH+ +KFIS++T REII RD++RFHHFK+G+CSCGDYW
Sbjct: 784 SGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 202/425 (47%), Gaps = 11/425 (2%)

Query: 209 SGSWNAMISGYCQSG-------NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           +G W   +    QS          V A D+L  +      +D  T   +   C    +  
Sbjct: 19  AGRWCGFLQQPVQSARCRSIFTGQVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAG 78

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +  +I++ G + N++  N LI +++  G M  A + FD +  + VV+WN+IIA Y 
Sbjct: 79  LGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYA 138

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q      A   F  M    ++P ++T + +    +     +  +  H  +++ G F+ D 
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVG-FVSDF 197

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            IG A+V MY K G ++ A  VF+GL  +DV ++N +I GYA++G   +A ++F  M++ 
Sbjct: 198 RIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQ- 256

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
               PN+ +++SIL   S   AL  G  +HA+ +   L  DV VAT L+ MY  CG I+ 
Sbjct: 257 EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEG 316

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F ++     V W  +I  +  +   + A   F  M +EG++PD IT++ ++ AC+ 
Sbjct: 317 ARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACAS 376

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           S  +S   R  H      G    L     +V ++ + G +  A      M  R D   W 
Sbjct: 377 SADLSLA-REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS-RRDVVSWS 434

Query: 622 ALLGA 626
           A++GA
Sbjct: 435 AMIGA 439


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 314/780 (40%), Positives = 464/780 (59%), Gaps = 36/780 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  + ++C+ +  +   K++H ++VVSG    VF +  LV  YA   +   S+  FD
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            I  RNV +WN++ S YV+     EAV  FY+  L SG++P+ ++   ++ AC  L D  
Sbjct: 217 EIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVL-SGIKPNEFSLSSMVNACTGLRDSS 275

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK IH  ++KLG++WD F A +L+ MY + G    A  +F+ +   D  SWNA+I+G  
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
              +  +AL++L +M+ +                           +H  ++K  +E +LF
Sbjct: 336 LHEHHEQALELLGQMKRQ---------------------------LHSSLMKMDMESDLF 368

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           VS  L++MY+K  ++  A   F+ + E+D+++WN+II+ Y Q  + + A   F  M + G
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 428

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I  +  TL ++    A L      R VHG  ++ G F  D+ + N+++D Y K   +  A
Sbjct: 429 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG-FHSDIYVVNSLIDSYGKCSHVEDA 487

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +FE   + D++S+ ++IT YAQ G   EA+++F  M++  E+ P++    S+L A ++
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM-ELKPDRFVCSSLLNACAN 546

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A  QG ++H  ++K     D+F    LV+MY KCG IDDA   F ++     V W+A+
Sbjct: 547 LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAM 606

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I     HG G +AL  F QML EGV P+HIT VS+L AC+H+GLV+E + YF  M+E FG
Sbjct: 607 IGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFG 666

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
            KP  +HY CM+DL GRAG +  A   +  MP   +AS+WGALLGA RIH ++ELG  A+
Sbjct: 667 FKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAA 726

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           + LF ++ E  G +VL++NIYA+ GKWE V EVR L RD  +KK PG S IEV +KV  F
Sbjct: 727 EMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTF 786

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+R+H + ++IY +L  L+  M   GYVP     L DVE+ EKE +L  HSE+LA+AF
Sbjct: 787 LVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAF 846

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+I++P  +PI++ KNLRVC DCH   K+I +I  REIIVRD NRFHHFKDG CSCGDYW
Sbjct: 847 GLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 299/594 (50%), Gaps = 44/594 (7%)

Query: 48  IDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + +  L   C     ++   ++HA +  SG          L+N Y+      ++R   D 
Sbjct: 57  VSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDE 116

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
            S  ++ +W+++IS Y + G    A+  F++  L  G++ + +TF  VLKAC   ++L  
Sbjct: 117 SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLL-GVKCNEFTFSSVLKACSIVKDLRI 175

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK++H  V+  GFE DVFVA +L+ MY +      +++LFD++P R+  SWNA+ S Y Q
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
                EA+ +  EM L G+  +  +++S++  C    +   G +IH Y++K G +++ F 
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA---YEQSNDPITAHGFFTTMQQ 338
           +N L++MYAK G +  A+ VF+++ + D+VSWN++IA    +E     +   G       
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG------- 348

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
                                  +  R +H  +M+      D+ +   +VDMY+K  ++ 
Sbjct: 349 -----------------------QMKRQLHSSLMKMD-MESDLFVSVGLVDMYSKCDLLE 384

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A   F  LP KD+I+WN +I+GY+Q     EA+ +F  M +   I  NQ T  +IL + 
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK-EGIGFNQTTLSTILKST 443

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +  +    ++H   +K+    D++V   L+D YGKC  ++DA  +F +      V + 
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 503

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           ++I+ +  +GQG++AL  F +M D  ++PD     SLL AC++     +G++  H+   +
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ-LHVHILK 562

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           +G    +     +V+++ + G +  A      +  R   S W A++G    HG+
Sbjct: 563 YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQHGH 615



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 162/592 (27%), Positives = 272/592 (45%), Gaps = 83/592 (14%)

Query: 144 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P   ++  +L  C   ++L  G +IH  + K G   D  +   L+++Y +      ARKL
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            D+    D  SW+A+ISGY Q+G    AL    EM L GV  +  T +S+L  C+   ++
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H  +V  G E ++FV+N L+ MYAK      + R+FD++ ER+VVSWN++ + Y
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q +    A G F  M  +GI+P+  +L S+ +    L D    + +HG++++ G+   D
Sbjct: 234 VQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW-D 292

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
               NA+VDMYAK+G +  A +VFE +   D++SWN +I G   +    +A+E+   M+ 
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
                                       ++H+ ++K  +  D+FV+  LVDMY KC  ++
Sbjct: 353 ----------------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA   F  +P    + WNAIIS +  + +  +AL+ F +M  EG+  +  T  ++L   S
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILK--S 442

Query: 561 HSGL-VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF------------ 607
            +GL V    R  H +  + G    +     ++D +G+  H+  A               
Sbjct: 443 TAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSF 502

Query: 608 ----------------------IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
                                 +Q+M ++PD  +  +LL AC       L A    +   
Sbjct: 503 TSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC-----ANLSAFEQGKQLH 557

Query: 646 VDSENVGYYV------LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           V     G+ +       + N+YA  G  +      S   +RG+     WS++
Sbjct: 558 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI---VSWSAM 606


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 323/884 (36%), Positives = 492/884 (55%), Gaps = 116/884 (13%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  + Q C KL++++   ++HA LVV+G     F  ++L+  Y   G +  +R  FD +S
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            RNV++W +++ +Y   G   E +  FY   +  G+RPD + FP V KAC  L +   GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR------------------------- 198
            ++  +L +GFE +  V  S+L M+ + G  ++AR                         
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270

Query: 199 ------KLFDDMPVR----DSGSWNAMISGYCQSG--------------------NAV-- 226
                 K   DM +     D  +WNA+ISGY QSG                    N V  
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 227 --------------EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
                         EAL +  +M LEGV  + IT+AS +  C     +  G  IH Y +K
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 273 -HGLEFNLFVSNNLINMYAK----------FGMMRH---------------------ALR 300
              L+ +L V N+L++ YAK          FGM++                      A+ 
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450

Query: 301 VFDQM----MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
           +  +M    +E D+++WN ++  + Q  D   A  FF  M   G+ P+  T+    +   
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           Q+ + +  + +HG+++R    +    +G+A++ MY+    +  AC+VF  L  +DV+ WN
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIEL-STGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           ++I+  AQ+G +  A+++ + M   N +  N  T VS LPA S + ALRQG +IH  +I+
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSN-VEVNTVTMVSALPACSKLAALRQGKEIHQFIIR 628

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             L    F+   L+DMYG+CG I  +  +F  +P+   V WN +IS +G+HG G  A+N 
Sbjct: 629 CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNL 688

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F+Q    G++P+HITF +LL+ACSHSGL+ EG +YF MM+ E+ + P ++ Y CMVDL  
Sbjct: 689 FQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLS 748

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG       FI+ MP  P+A++WG+LLGACRIH N +L   A+  LFE++ ++ G YVL
Sbjct: 749 RAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVL 808

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           M+NIY+  G+WE   ++R L ++RG+ K PG S IEV  K+  F  G+ +HP  E+I  +
Sbjct: 809 MANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAK 868

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           + +L   +K +GYVPD +FVLQDV+EDEKE  L  HSE++A+AFG+IS+   +P++I KN
Sbjct: 869 MESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKN 928

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH+ TKFIS++ +R+II+RD+ RFHHF DG+CSCGDYW
Sbjct: 929 LRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 316/789 (40%), Positives = 476/789 (60%), Gaps = 44/789 (5%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHT 101
           + +  L Q C   +  +R   +H  ++ +G     +  TK++  YA  G   DL ++R  
Sbjct: 72  LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RN 158
           F+ +  RN+  WN+MI  Y R     EA   F +  L  G+ PD +TF   L+ C   R+
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRM-LKIGVCPDNFTFASALRVCGALRS 190

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              GK++H  ++  GF+ D FV  +L+ MY +        K+FD+M  R+  +WN++IS 
Sbjct: 191 RDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISA 250

Query: 219 YCQSGNAVEALDILDEMRL--EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
             Q G+  +AL +   M+   +G+  D  T  ++L +CA   N   G  IH ++++  + 
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N+ V   L++MY++ G + +A  +F++M ER+  SWNS+I  Y+Q+ +   A   F  M
Sbjct: 311 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 370

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  GI+PD  +L S+ S    L+D +  R +H FI+R     E+ I+   +VDMYAK G 
Sbjct: 371 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT-MEEEGILQVVLVDMYAKCGS 429

Query: 397 INSACAVFEGLPVKD--VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           ++ A  V++    KD     WN+++ GYA  GL  E+   F  M E ++I  +  T V+I
Sbjct: 430 MDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLE-SDIEYDVLTMVTI 488

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           +                     N L  +    T LVDMY KCG I  A ++F  +   + 
Sbjct: 489 V---------------------NLLVLE----TALVDMYSKCGAITKARTVFDNMNGKNI 523

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V WNA+IS +  HG   +AL  + +M  +G+ P+ +TF+++L+ACSH+GLV EG R F  
Sbjct: 524 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 583

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           MQE++ I+   +HY CMVDL GRAG L  A  F++ MP+ P+ S WGALLGACR+H +M+
Sbjct: 584 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMD 643

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G +A+ RLFE+D +N G YV+MSNIYA  G+W+ V+++R + + +G+KK PG S IE+N
Sbjct: 644 MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 703

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ---DVEEDEKEHILTS 751
           +++ IF+ G++THPK E+IY+ LR+LT + K LGY+PD SF+LQ   D++E+E+E  L  
Sbjct: 704 SEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQ 763

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSERLA++ G+IS P KS I++FKNLR+CGDCH  TKFIS+IT R II RD+NRFHHF++
Sbjct: 764 HSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFEN 823

Query: 812 GICSCGDYW 820
           G CSCGDYW
Sbjct: 824 GKCSCGDYW 832



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 225/424 (53%), Gaps = 18/424 (4%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR---HA 298
           ++P+  +S++  C  S++   G  IH  ++ +G   + ++   ++ +YA+ G +    +A
Sbjct: 69  VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            ++F++M ER++ +WN++I AY + +D + A G F  M + G+ PD  T  S   +   L
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + VH  ++  G F  D  +GNA++DMYAK     S   VF+ +  ++ ++WN++
Sbjct: 189 RSRDGGKQVHSKLIACG-FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSI 247

Query: 419 ITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           I+  AQ G  ++A+ +F  M+E  + I P+Q T+ ++L   ++     QG +IHA +I+ 
Sbjct: 248 ISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA 307

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            +  ++ V T LV MY +CGR++ A  +F ++   ++  WN++I  +  +G+  +AL  F
Sbjct: 308 NITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLF 367

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG----CMVD 593
           +QM   G++PD  +  S+L++C       +G R  H     F ++  ++  G     +VD
Sbjct: 368 KQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG-RELH----NFIVRNTMEEEGILQVVLVD 422

Query: 594 LFGRAGHLGMAHN-FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           ++ + G +  A   + Q +    + ++W ++L     + N  L   + +   E+   ++ 
Sbjct: 423 MYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG---YANKGLKKESFNHFLEMLESDIE 479

Query: 653 YYVL 656
           Y VL
Sbjct: 480 YDVL 483


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 308/780 (39%), Positives = 464/780 (59%), Gaps = 9/780 (1%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  + ++CT    +   K++H ++VV+G     F +  LV  YA  G    +R  FD
Sbjct: 10  EFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFD 69

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---V 160
            I  R+V +WN++ S YV      EAV  F+   L SG+RP+ ++   ++  C  L   V
Sbjct: 70  AIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVL-SGIRPNEFSLSSMINVCTGLEDSV 128

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+KIH  ++KLG++ D F A +L+ MY + G+   A  +FD++   D  SWNA+I+G  
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
                  AL++L EM   G+  +  T++S L  CA       G  +H  ++K  +  + F
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +   LI+MY+K   M  A  VF  M ERD+++WN++I+ + Q+ +   A   F  M   G
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I  +  TL ++   +A L      R +H   ++ G+  ++ ++ N+++D Y K G +  A
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVV-NSLIDTYGKCGHVEDA 367

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE  P+ D++ + +L+T YAQ+G   EA+ ++  M++   I P+     S+L A + 
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQD-RGIKPDSFVCSSLLNACAS 426

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A  QG ++H  ++K     D+F    LV+MY KCG I+DA   F ++P    V W+A+
Sbjct: 427 LSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAM 486

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I     HG G +AL  F+QML  GV P+HIT VS+L AC+H+GLV+E + YF+ M+  FG
Sbjct: 487 IGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFG 546

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I+P  +HY CM+DL GRAG L  A   +  MP + +A +WGALLGA RIH N++LG  A+
Sbjct: 547 IEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAA 606

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           + L  ++ E  G +VL++NIYA+VG W+ V  VR L +D  +KK PG S +EV +KV  F
Sbjct: 607 EMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTF 666

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+R+H +  +IY +L  L+  +K  GYVP     L DVE  EKE +L  HSE+LA+AF
Sbjct: 667 IVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAF 726

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+I++PP +PI++ KNLR+C DCH   KFIS+I  REIIVRD+NRFHHF++G CSCG+YW
Sbjct: 727 GLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/495 (32%), Positives = 272/495 (54%), Gaps = 9/495 (1%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G++ + + FP VLKAC   ++LV GK++H  V+  GF+ D FVA SL+ +Y + G    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R LFD +P R   SWNA+ S Y  S    EA+ +  +M L G+  +  +++S++ VC   
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           ++ + G  IH Y++K G + + F +N L++MYAK G++  A  VFD++ + D+VSWN+II
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A          A      M ++G+ P++ TL S     A +      R +H  +++    
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD-M 243

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             D  +G  ++DMY+K   ++ A  VF+ +P +D+I+WN +I+G++QN    EA  +F +
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M     I  NQ T  ++L + + + A     +IHA  +K+   FD +V   L+D YGKCG
Sbjct: 304 M-HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            ++DA  +F + P    V + ++++ +   GQG++AL  + +M D G++PD     SLL 
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422

Query: 558 ACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           AC+      +G Q + H+++  FG    +     +V+++ + G +  A      +PVR  
Sbjct: 423 ACASLSAYEQGKQVHVHILK--FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGI 480

Query: 617 ASIWGALLGACRIHG 631
            S W A++G    HG
Sbjct: 481 VS-WSAMIGGLAQHG 494



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 198/379 (52%), Gaps = 3/379 (0%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M L G+  +     S+L  C  + +++ G  +H  +V  G + + FV+N+L+ +YAK G 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
              A  +FD + +R VVSWN++ + Y  S+    A   F  M  +GI+P+  +L S+ ++
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
              L D    R +HG++++ G +  D    NA+VDMYAK+GI+  A +VF+ +   D++S
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLG-YDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN +I G   +     A+E+ + M +   + PN  T  S L A + +     G ++H+ +
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSG-MCPNMFTLSSALKACAGMALRELGRQLHSSL 238

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           IK  +  D F+   L+DMY KC  +DDA  +F  +P    + WNA+IS H  + + ++A 
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F  M  EG+  +  T  ++L + + +   +   R  H +  + G +        ++D 
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKSIA-ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDT 357

Query: 595 FGRAGHLGMAHNFIQNMPV 613
           +G+ GH+  A    +  P+
Sbjct: 358 YGKCGHVEDATRVFEESPI 376


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/797 (38%), Positives = 466/797 (58%), Gaps = 44/797 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  L   G    ++    L+NFY+   D++ +   F  ++ R+V TW+SMI+ Y   
Sbjct: 76  KMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGN 135

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
              ++A D F + T  + + P+  TF  +LKAC N   L  G+KIH  V  +G E DV V
Sbjct: 136 NHPAKAFDTFERMT-DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAV 194

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G  +VA ++F  M  R+  SW A+I    Q     EA ++ ++M   G+
Sbjct: 195 ATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGI 254

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S + +T  S+L  C   + +  G  IH +I + GLE ++ V+N LI MY K   ++ A  
Sbjct: 255 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEARE 314

Query: 301 VFDQMMERDVVSWNSIIAAYEQS--NDPITAHGFFT---TMQQAGIQPDLLTLVSLTSIV 355
           +FD+M +RDV+SW+++IA Y QS   D  +    F     M++ G+ P+ +T +S+    
Sbjct: 315 IFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374

Query: 356 AQLNDCRNSRSVHGFIMRRGWFME------------------------------DVIIGN 385
                    R +H  + + G+ ++                              +V+   
Sbjct: 375 TAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWT 434

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME--ECNE 443
           + + MY K G ++SA  VF  +P ++V+SWN +I GYAQNG   + ++VF+++   +   
Sbjct: 435 SFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNG---DIVKVFELLSSMKAEG 491

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
             P++ T ++IL A   +  L +G  +HA  +K  L  D  VAT L+ MY KCG++ +A 
Sbjct: 492 FQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEAR 551

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           ++F ++    +V WNA+++ +G HG G +A++ F++ML E V P+ IT  ++++ACS +G
Sbjct: 552 TVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAG 611

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV EG+  F MMQE+F + P  +HYGCMVDL GRAG L  A  FIQ+MP  PD S+W AL
Sbjct: 612 LVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHAL 671

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           LGAC+ H N++L   A+  + E++      Y+ +SNIYA  G+W+   +VR +  DRGLK
Sbjct: 672 LGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLK 731

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K  G SSIE++ ++  F   +  HP+ + I+ EL  LT +MK  GY PD  FVL DV++ 
Sbjct: 732 KDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDV 791

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           +KE  L  HSE+LAIA+G++ +P  +PI+I KNLRVCGDCH  TKFIS+I +REI+ RD+
Sbjct: 792 QKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDA 851

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFH+F +G CSCGD+W
Sbjct: 852 NRFHYFNNGTCSCGDFW 868



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 260/549 (47%), Gaps = 42/549 (7%)

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDV 178
           + GRL EA+          GL  +  T+  V++ C   R   DGK +H  + +LG E D+
Sbjct: 33  KAGRLREAIQ-LLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDI 91

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           ++  SL++ Y +F     A ++F  M +RD  +W++MI+ Y  + +  +A D  + M   
Sbjct: 92  YLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDA 151

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            +  + IT  SIL  C     +  G  IH  +   G+E ++ V+  LI MY+K G +  A
Sbjct: 152 NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVA 211

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VF +M ER+VVSW +II A  Q      A   +  M QAGI P+ +T VSL +     
Sbjct: 212 CEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTP 271

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 R +H  I  RG    D+I+ NA++ MY K   +  A  +F+ +  +DVISW+ +
Sbjct: 272 EALNRGRRIHSHISERG-LETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330

Query: 419 ITGYAQNGLA-SEAI-EVFQMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           I GYAQ+G    E+I EVFQ++E      + PN+ T++SIL A +  GAL QG +IHA +
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRI-------------------------------DDAM 503
            K     D  + T + +MY KCG I                                 A 
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAE 450

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F ++P  + V WN +I+ +  +G   K       M  EG +PD +T +++L AC    
Sbjct: 451 KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALA 510

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            +  G +  H    + G++        ++ ++ + G +  A      M  R D   W A+
Sbjct: 511 GLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR-DTVAWNAM 568

Query: 624 LGACRIHGN 632
           L     HG+
Sbjct: 569 LAGYGQHGD 577



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 256/501 (51%), Gaps = 25/501 (4%)

Query: 192 GLANVARKLFDDMPVRDSGS--WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           G A+  ++L  D P   SG   W       C++G   EA+ +L  ++  G+ ++  T   
Sbjct: 9   GFASTGKEL--DGPTSVSGGEVWR-----LCKAGRLREAIQLLGIIKQRGLLVNSNTYGC 61

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           ++  CA++     G ++H  + + G+E ++++ N+LIN Y+KF  +  A +VF +M  RD
Sbjct: 62  VIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRD 121

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VV+W+S+IAAY  +N P  A   F  M  A I+P+ +T +S+       +     R +H 
Sbjct: 122 VVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHT 181

Query: 370 FIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            +   G  ME DV +  A++ MY+K G I+ AC VF  +  ++V+SW  +I   AQ+   
Sbjct: 182 IVKAMG--METDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKL 239

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
           +EA E+++ M +   I+PN  T+VS+L + +   AL +G +IH+ + +  L  D+ VA  
Sbjct: 240 NEAFELYEQMLQAG-ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANA 298

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK-----ALNFFRQMLDE 543
           L+ MY KC  + +A  +F ++ +   + W+A+I+ +   G  DK           +M  E
Sbjct: 299 LITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRRE 358

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           GV P+ +TF+S+L AC+  G + +G R  H    + G +        + +++ + G +  
Sbjct: 359 GVFPNKVTFMSILRACTAHGALEQG-RQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYE 417

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF-EVDSENVGYYVLMSNIYA 662
           A      M  + +   W + L      G++     +++++F E+ + NV  + LM   YA
Sbjct: 418 AEQVFSKMANK-NVVAWTSFLSMYIKCGDLS----SAEKVFSEMPTRNVVSWNLMIAGYA 472

Query: 663 NVGKWEGVDEVRSLARDRGLK 683
             G    V E+ S  +  G +
Sbjct: 473 QNGDIVKVFELLSSMKAEGFQ 493



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/460 (28%), Positives = 212/460 (46%), Gaps = 57/460 (12%)

Query: 10  DRRLCKLLPLLQA---HRPL---FSAAANSLQ--ISPDCLENESREIDFDDLFQSCTK-- 59
           +R +     ++QA   HR L   F      LQ  ISP+        + F  L  SC    
Sbjct: 220 ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNA-------VTFVSLLNSCNTPE 272

Query: 60  -LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
            L+  +R+H+ +   G    +  +  L+  Y     +  +R  FD +S R+V +W++MI+
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332

Query: 119 VYVRCG-RLSEAVDCFYQF---TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLK 171
            Y + G +  E++D  +Q        G+ P+  TF  +L+AC     L  G++IH  + K
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392

Query: 172 LGFEWD-------------------------------VFVAASLLHMYCRFGLANVARKL 200
           +GFE D                               V    S L MY + G  + A K+
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKV 452

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F +MP R+  SWN MI+GY Q+G+ V+  ++L  M+ EG   D +TV +IL  C     +
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G L+H   VK GLE +  V+ +LI MY+K G +  A  VFD+M  RD V+WN+++A Y
Sbjct: 513 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGY 572

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q  D + A   F  M +  + P+ +TL ++ S  ++    +  R +   +         
Sbjct: 573 GQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPR 632

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
                 +VD+  + G +  A    + +P + D+  W+ L+
Sbjct: 633 KQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 20/188 (10%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + ++C  L  ++R   +HA  V  G       +T L+  Y+  G ++ +R  FD +S R+
Sbjct: 502 ILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRD 561

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
              WN+M++ Y + G   EAVD F +  L   + P+  T   V+ AC     + +G++I 
Sbjct: 562 TVAWNAMLAGYGQHGDGLEAVDLFKRM-LKERVSPNEITLTAVISACSRAGLVQEGREI- 619

Query: 167 CSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGY 219
               ++  + D  +     H  C      R G    A +    MP   D   W+A++ G 
Sbjct: 620 ---FRM-MQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL-GA 674

Query: 220 CQSGNAVE 227
           C+S N V+
Sbjct: 675 CKSHNNVQ 682


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 294/702 (41%), Positives = 441/702 (62%), Gaps = 7/702 (0%)

Query: 124 GRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
            ++ + ++CF  F   +  G RPD YT P V++ACR+L +   G+ IH  V K G + D 
Sbjct: 6   AKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDH 65

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV A+L+ MY +      AR LFD M  RD  +W  MI GY + G A E+L + ++MR E
Sbjct: 66  FVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREE 125

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           GV  D + + +++  CA+   +    +I  YI +   + ++ +   +I+MYAK G +  A
Sbjct: 126 GVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESA 185

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +FD+M E++V+SW+++IAAY        A   F  M  +G+ PD +TL SL    + L
Sbjct: 186 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDL 245

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            + +  R +H  + + G  + D  +  A+VDMY K   I  A  +F+ +P +D+++W  +
Sbjct: 246 KNLQMGRLIHHIVYKFGLDL-DHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVM 304

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I GYA+ G A+E++ +F  M E   + P++   V+++ A + +GA+ +   I   + +  
Sbjct: 305 IGGYAECGNANESLVLFDKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK 363

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              DV + T ++DM+ KCG ++ A  +F ++   + + W+A+I+ +G HGQG KAL+ F 
Sbjct: 364 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 423

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            ML  G+ P+ IT VSLL ACSH+GLV EG R+F +M E++ ++  +KHY C+VDL GRA
Sbjct: 424 MMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRA 483

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A   I++M V  D  +WGA LGACR H ++ L   A+  L E+  +N G+Y+L+S
Sbjct: 484 GRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLS 543

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           NIYAN G+WE V + R L   R LKK PGW+ IEV+NK   F  G+ THP+ ++IY+ L+
Sbjct: 544 NIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 603

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
           +L  K++ +GYVPD +FVL DV+E+ K  IL SHSE+LAIAFG+I++P  +PI+I KNLR
Sbjct: 604 SLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLR 663

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           VCGDCH + K +S IT R IIVRD+NRFHHFK+G CSCGDYW
Sbjct: 664 VCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/430 (32%), Positives = 238/430 (55%), Gaps = 7/430 (1%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F    LV+ Y    ++  +R  FD +  R++ TW  MI  Y  CG+ +E++  F +    
Sbjct: 66  FVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR-E 124

Query: 140 SGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            G+ PD      V+ AC  L      + I   + +  F+ DV +  +++ MY + G    
Sbjct: 125 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 184

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR++FD M  ++  SW+AMI+ Y   G   +ALD+   M   G+  D IT+AS+L  C+ 
Sbjct: 185 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSD 244

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
             N+  G LIH  + K GL+ + FV   L++MY K   +  A  +FD+M ERD+V+W  +
Sbjct: 245 LKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVM 304

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y +  +   +   F  M++ G+ PD + +V++    A+L     +R++  +I R+  
Sbjct: 305 IGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKK- 363

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F  DVI+G A++DM+AK G + SA  +F+ +  K+VISW+ +I  Y  +G   +A+++F 
Sbjct: 364 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 423

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGK 495
           MM   + I PN+ T VS+L A SH G + +G++  + + ++  +  DV   TC+VD+ G+
Sbjct: 424 MMLR-SGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGR 482

Query: 496 CGRIDDAMSL 505
            GR+D+A+ L
Sbjct: 483 AGRLDEALKL 492



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 217/419 (51%), Gaps = 6/419 (1%)

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           M+ G+ + G+ +       E+   G   D  T+  ++  C    N+  G LIH  + K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           L+ + FV   L++MY K   +  A  +FD+M ERD+V+W  +I  Y +      +   F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M++ G+ PD + +V++    A+L     +R +  +I R+  F  DVI+G A++DMYAK 
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK-FQLDVILGTAMIDMYAKC 179

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G + SA  +F+ +  K+VISW+ +I  Y  +G   +A+++F+MM     + P++ T  S+
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML-PDKITLASL 238

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S +  L+ G  IH  V K  L  D FV   LVDMYGKC  I+DA  LF ++P    
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W  +I  +   G  +++L  F +M +EGV PD +  V+++ AC+  G + + +     
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358

Query: 575 MQ-EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           +Q ++F +   L     M+D+  + G +  A      M  +   S W A++ A   HG 
Sbjct: 359 IQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYHGQ 414



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 194/388 (50%), Gaps = 7/388 (1%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V   T +++ YA  G +  +R  FD +  +NV +W++MI+ Y   G+  +A+D F +  L
Sbjct: 166 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-RMML 224

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
           +SG+ PD  T   +L AC   +NL  G+ IH  V K G + D FV A+L+ MY +     
Sbjct: 225 SSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 284

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR LFD MP RD  +W  MI GY + GNA E+L + D+MR EGV  D + + +++  CA
Sbjct: 285 DARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 344

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +   +     I  YI +   + ++ +   +I+M+AK G +  A  +FD+M E++V+SW++
Sbjct: 345 KLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 404

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +IAAY        A   F  M ++GI P+ +TLVSL    +              +    
Sbjct: 405 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDY 464

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEV 434
               DV     VVD+  + G ++ A  + E + V KD   W   +     +     A + 
Sbjct: 465 SVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKA 524

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVG 462
              + E    NP  G Y+ +   Y++ G
Sbjct: 525 ATSLLELQPQNP--GHYILLSNIYANAG 550


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/708 (43%), Positives = 439/708 (62%), Gaps = 7/708 (0%)

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 172
           M+  Y +   L  A+  F +    S +RP  Y F  +LK C    +L  GK+IH SV+  
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDS-VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF W++F    +++MY +    N A  +FD MP RD   WN MISGY Q+G A  AL ++
Sbjct: 60  GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             M  EG   D IT+ SILP  A +  +  G+ +H Y+++ G E  + VS  L++MY+K 
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A  +FD M  R VVSWNS+I  Y QS D   A   F  M   G+QP  +T++   
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A L D    + VH  + +      DV + N+++ MY+K   ++ A  +F+ L  K +
Sbjct: 240 HACADLGDLERGKFVHKLVDQLK-LDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +SWN +I GYAQNG  +EA+  F  M+  N I P+  T VS++PA + +   RQ   IH 
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRN-IKPDSFTMVSVIPALAELSIPRQAKWIHG 357

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            VI+  L  +VFV T LVDMY KCG I  A  LF  +     + WNA+I  +G HG G  
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKT 417

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           ++  F++M    ++P+ ITF+  L+ACSHSGLV EG  +F  M++++GI+P + HYG MV
Sbjct: 418 SVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMV 477

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DL GRAG L  A +FIQ MP++P  +++GA+LGAC+IH N++LG  A+  +F+++ ++ G
Sbjct: 478 DLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGG 537

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
           Y+VL++NIYA    W  V +VR++    GL+KTPG S +E+ N+V  FY+G  +HP+ +K
Sbjct: 538 YHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKK 597

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           IY  L  L  ++++ GYVPD + +  DVE+D K  +L +HSE+LAIAFG++++   +PI 
Sbjct: 598 IYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIH 656

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLRVCGDCHN TK+IS +T REIIVRD +RFH FKDG+CSCGDYW
Sbjct: 657 IRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 291/566 (51%), Gaps = 28/566 (4%)

Query: 49  DFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           +F  L + C   + L   K +H  ++ SG    +F+ T +VN YA    ++ + + FD +
Sbjct: 32  NFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRM 91

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDG 162
             R++  WN+MIS Y + G    A+    + +   G RPD  T   +L A    R L  G
Sbjct: 92  PERDLVCWNTMISGYAQNGFAKVALMLVLRMS-EEGHRPDSITIVSILPAVADTRLLRIG 150

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
             +H  VL+ GFE  V V+ +L+ MY + G  ++AR +FD M  R   SWN+MI GY QS
Sbjct: 151 MAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQS 210

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G+A  A+ I  +M  EGV    +TV   L  CA   ++  G  +H  + +  L+ ++ V 
Sbjct: 211 GDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVM 270

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N+LI+MY+K   +  A  +F  +  + +VSWN++I  Y Q+     A   F  MQ   I+
Sbjct: 271 NSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIK 330

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  T+VS+   +A+L+  R ++ +HG ++RR +  ++V +  A+VDMYAK G I++A  
Sbjct: 331 PDSFTMVSVIPALAELSIPRQAKWIHGLVIRR-FLDKNVFVMTALVDMYAKCGAIHTARK 389

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ +  + VI+WN +I GY  +GL   ++E+F+ M++   I PN  T++  L A SH G
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKK-GTIKPNDITFLCALSACSHSG 448

Query: 463 ALRQGIKIHARVIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WN 518
            + +G+     + K+       D + A  +VD+ G+ GR++ A     ++P    +  + 
Sbjct: 449 LVEEGLCFFESMKKDYGIEPTMDHYGA--MVDLLGRAGRLNQAWDFIQKMPIKPGITVYG 506

Query: 519 AIISCHGIHGQGD----KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           A++    IH   D     A   F+   D+G    H+   ++    S  G V++       
Sbjct: 507 AMLGACKIHKNVDLGEKAAFEIFKLNPDDG--GYHVLLANIYATASMWGKVAK----VRT 560

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGH 600
           + E+ G++   K  GC +   G   H
Sbjct: 561 IMEKSGLQ---KTPGCSLVEIGNEVH 583


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/771 (39%), Positives = 467/771 (60%), Gaps = 7/771 (0%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L + CT L  + ++  L++ +G        TKL++ +     ++ +   F+ + ++    
Sbjct: 50  LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVL 109

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           +++M+  Y +   L +AV  FY+      + P  Y F  +L+     +D   G++IH  V
Sbjct: 110 YHTMLKGYAKNSTLRDAVR-FYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMV 168

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  GF+ ++F   +++++Y +      A K+F+ MP RD  SWN +++GY Q+G A  A+
Sbjct: 169 ITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAV 228

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            ++ +M+  G   D IT+ S+LP  A    +  G  IH Y  + G E+ + V+  +++ Y
Sbjct: 229 QVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTY 288

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G +R A  VF  M  R+VVSWN++I  Y Q+ +   A   F  M   G++P  ++++
Sbjct: 289 FKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMM 348

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                 A L D    R VH  +  +     DV + N+++ MY+K   ++ A +VF  L  
Sbjct: 349 GALHACANLGDLERGRYVHRLLDEKKIGF-DVSVMNSLISMYSKCKRVDIAASVFGNLKH 407

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K V++WN +I GYAQNG  +EA+ +F  M+  ++I P+  T VS++ A + +   RQ   
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQS-HDIKPDSFTLVSVITALADLSVTRQAKW 466

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH   I+  +  +VFV T L+D + KCG I  A  LF  +     + WNA+I  +G +G 
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGH 526

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +AL+ F +M +  V+P+ ITF+S++ ACSHSGLV EG  YF  M+E +G++P + HYG
Sbjct: 527 GREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYG 586

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            MVDL GRAG L  A  FIQ+MPV+P  ++ GA+LGACRIH N+ELG   +D LF++D +
Sbjct: 587 AMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPD 646

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + GY+VL++N+YA+   W+ V  VR+    +G++KTPG S +E+ N+V  FY+G+  HP+
Sbjct: 647 DGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQ 706

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            ++IY  L  L  +MK+ GYVPD + +  DVEED KE +L+SHSERLAIAFG++++   +
Sbjct: 707 SKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGT 765

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I I KNLRVCGDCH  TK+IS +T REIIVRD  RFHHFK+GICSCGDYW
Sbjct: 766 AIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 311/810 (38%), Positives = 464/810 (57%), Gaps = 45/810 (5%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + + C KL      K +H  L   G    ++    L+NFY+  GD++     F  ++ R+
Sbjct: 84  IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           V TW+SMI+ Y      ++A D F +    + + P+  TF  +LKAC N   L   ++IH
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMK-DANIEPNRITFLSILKACNNYSMLEKAREIH 202

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V   G E DV VA +L+ MY + G  ++A ++F  M  R+  SW A+I    Q     
Sbjct: 203 TVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLN 262

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA ++ ++M   G+S + +T  S+L  C   + +  G  IH +I + GLE ++ V+N LI
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS--NDPITAHGFFT---TMQQAGI 341
            MY K   ++ A   FD+M +RDV+SW+++IA Y QS   D  +    F     M++ G+
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII---- 397
            P+ +T +S+    +        R +H  I + G F  D  +  A+ +MYAK G I    
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVG-FESDRSLQTAIFNMYAKCGSIYEAE 441

Query: 398 ---------------------------NSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
                                       SA  VF  +  ++V+SWN +I GYAQ+G  ++
Sbjct: 442 QVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAK 501

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
             E+   M +     P++ T +SIL A   + AL +G  +HA  +K  L  D  VAT L+
Sbjct: 502 VFELLSSM-KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLI 560

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
            MY KCG + +A ++F ++    +V WNA+++ +G HG G +A++ F++ML E V P+ I
Sbjct: 561 GMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEI 620

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TF ++++AC  +GLV EG+  F +MQE+F +KP  +HYGCMVDL GRAG L  A  FIQ 
Sbjct: 621 TFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQR 680

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP  PD S+W ALLGAC+ H N++L   A+  +  ++  N   YV +SNIYA  G+W+  
Sbjct: 681 MPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDS 740

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            +VR +  D+GLKK  G SSIE++ ++  F   +  HP+ + I+ EL  LT +MK  GY 
Sbjct: 741 TKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYT 800

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           PD  FVL DV+E +KE  L  HSE+LAIA+G++ +PP +PI+I KNLRVCGDCH  TKFI
Sbjct: 801 PDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFI 860

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+I +REI+ RD+NRFH+FK+G CSCGD+W
Sbjct: 861 SKIRKREIVARDANRFHYFKNGTCSCGDFW 890



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 256/548 (46%), Gaps = 42/548 (7%)

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDV 178
           + GRL EA+          GL  +  T+  +++ C   R   DGK +H  + +LG   D+
Sbjct: 55  KAGRLKEAIQ-LLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDI 113

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           ++  SL++ Y +FG      ++F  M +RD  +W++MI+ Y  + +  +A D  + M+  
Sbjct: 114 YLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDA 173

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            +  + IT  SIL  C     +     IH  +   G+E ++ V+  LI MY+K G +  A
Sbjct: 174 NIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLA 233

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +F +M ER+VVSW +II A  Q      A   +  M QAGI P+ +T VSL +     
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTP 293

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 R +H  I  RG    DV++ NA++ MY K   I  A   F+ +  +DVISW+ +
Sbjct: 294 EALNRGRRIHSHISERG-LETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352

Query: 419 ITGYAQNGLASEAI--EVFQMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           I GYAQ+G   +    EVFQ++E      + PN+ T++SIL A S  GAL QG +IHA +
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH---------- 524
            K     D  + T + +MY KCG I +A  +F ++   + V W ++++ +          
Sbjct: 413 SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAE 472

Query: 525 -------------------GIHGQGD--KALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
                              G    GD  K       M  EG +PD +T +S+L AC    
Sbjct: 473 KVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALS 532

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            +  G +  H    + G++        ++ ++ + G +  A      +  R D   W A+
Sbjct: 533 ALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAM 590

Query: 624 LGACRIHG 631
           L     HG
Sbjct: 591 LAGYGQHG 598



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 253/499 (50%), Gaps = 21/499 (4%)

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G A+   +L     V     W       C++G   EA+ +L  ++  G+ ++  T   I+
Sbjct: 31  GFASTGEELAGPRSVSGGEVWR-----LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCII 85

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             CA+      G ++H  + + GL  ++++ N+LIN Y+KFG +    +VF +M  RDVV
Sbjct: 86  EHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVV 145

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +W+S+IAAY  +N P  A   F  M+ A I+P+ +T +S+       +    +R +H  +
Sbjct: 146 TWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVV 205

Query: 372 MRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
              G  ME DV +  A++ MY+K G I+ AC +F+ +  ++V+SW  +I   AQ+   +E
Sbjct: 206 KASG--METDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A E+++ M +   I+PN  T+VS+L + +   AL +G +IH+ + +  L  DV VA  L+
Sbjct: 264 AFELYEKMLQAG-ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK-----ALNFFRQMLDEGV 545
            MY KC  I DA   F ++ +   + W+A+I+ +   G  DK           +M  EGV
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            P+ +TF+S+L ACS  G + +G R  H    + G +        + +++ + G +  A 
Sbjct: 383 FPNKVTFMSILKACSVHGALEQG-RQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAE 441

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF-EVDSENVGYYVLMSNIYANV 664
                M  + +   W +LL      G++     +++++F E+ + NV  + LM   YA  
Sbjct: 442 QVFSKMENK-NVVAWASLLTMYIKCGDL----TSAEKVFSEMSTRNVVSWNLMIAGYAQS 496

Query: 665 GKWEGVDEVRSLARDRGLK 683
           G    V E+ S  +  G +
Sbjct: 497 GDIAKVFELLSSMKVEGFQ 515



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 162/333 (48%), Gaps = 19/333 (5%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           +++  C  ++  +++ + +    + K V +   L+  Y   GDL+ +   F  +S RNV 
Sbjct: 429 NMYAKCGSIYEAEQVFSKM----ENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVV 484

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCS 168
           +WN MI+ Y + G +++  +      +  G +PD  T   +L+AC     L  GK +H  
Sbjct: 485 SWNLMIAGYAQSGDIAKVFELLSSMKV-EGFQPDRVTIISILEACGALSALERGKLVHAE 543

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            +KLG E D  VA SL+ MY + G    AR +FD +  RD+ +WNAM++GY Q G   EA
Sbjct: 544 AVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEA 603

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN---- 284
           +D+   M  E V  + IT  +++  C R+  +  G  I   + +   +F +         
Sbjct: 604 VDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE---DFRMKPGKQHYGC 660

Query: 285 LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           ++++  + G ++ A     +M  E D+  W++++ A +  ++   A   +       ++P
Sbjct: 661 MVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAE--WAAHHILRLEP 718

Query: 344 DLLTL-VSLTSIVAQLNDCRNSRSVHGFIMRRG 375
              ++ V+L++I AQ     +S  V   +  +G
Sbjct: 719 SNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKG 751


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 319/801 (39%), Positives = 467/801 (58%), Gaps = 22/801 (2%)

Query: 25  PL-FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSST 83
           PL F    N L +   C++++S             K+H     H L   S    +V    
Sbjct: 2   PLRFEVKNNYLHLLEACIQSKS--------LTEAKKIHQ----HFLKNTSNADSSVLH-- 47

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL   Y +   +  +R  FD I   +V  WN +I  Y   G    A+D  Y   L  G+R
Sbjct: 48  KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAID-LYHSMLHLGVR 106

Query: 144 PDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+ YT+P VLKAC  L+   DG +IH      G E DVFV  +L+  Y + G+   A++L
Sbjct: 107 PNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRL 166

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  M  RD  +WNAMI+G    G   +A+ ++ +M+ EG+  +  T+  +LP    +  +
Sbjct: 167 FSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKAL 226

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H Y V+   +  + V   L++MYAK   + +A ++FD M  R+ VSW+++I  Y
Sbjct: 227 GHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGY 286

Query: 321 EQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
             S+    A   F  M  +  + P  +TL S+    A+L D    R +H +I++ G  + 
Sbjct: 287 VASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVL- 345

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D+++GN ++ MYAK G+I+ A   F+ +  KD +S++ +++G  QNG A+ A+ +F+MM+
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             + I+P+  T + +LPA SH+ AL+ G   H  +I      D  +   L+DMY KCG+I
Sbjct: 406 -LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 464

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             A  +F ++ R   V WNA+I  +GIHG G +AL  F  +L  G++PD ITF+ LL++C
Sbjct: 465 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 524

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGLV EG+ +F  M  +F I P ++H  CMVD+ GRAG +  AH+FI+NMP  PD  I
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W ALL ACRIH N+ELG   S ++  +  E+ G +VL+SNIY+  G+W+    +R   +D
Sbjct: 585 WSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKD 644

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
            GLKK PG S IE+N  V  F  G+++H +  +I  +L  L  +MK LGY  + SFV QD
Sbjct: 645 WGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQD 704

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           VEE+EKE IL  HSE+LAIAFGI++     PI + KNLRVCGDCH   KF++ IT+REI 
Sbjct: 705 VEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREIT 764

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+NRFHHFK+G C+CGD+W
Sbjct: 765 VRDANRFHHFKNGTCNCGDFW 785


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/741 (41%), Positives = 447/741 (60%), Gaps = 7/741 (0%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL   Y +   +  +R  FD I   +V  WN +I  Y   G    A+D  Y   L  G+R
Sbjct: 48  KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAID-LYHSMLHLGVR 106

Query: 144 PDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+ YT+P VLKAC  L+   DG +IH      G E DVFV  +L+  Y + G+   A++L
Sbjct: 107 PNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRL 166

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  M  RD  +WNAMI+G    G   +A+ ++ +M+ EG+  +  T+  +LP    +  +
Sbjct: 167 FSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKAL 226

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H Y V+   +  + V   L++MYAK   + +A ++FD M  R+ VSW+++I  Y
Sbjct: 227 GHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGY 286

Query: 321 EQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
             S+    A   F  M  +  + P  +TL S+    A+L D    R +H +I++ G  + 
Sbjct: 287 VXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVL- 345

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D+++GN ++ MYAK G+I+ A   F+ +  KD +S++ +++G  QNG A+ A+ +F+MM+
Sbjct: 346 DILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             + I+P+  T + +LPA SH+ AL+ G   H  +I      D  +   L+DMY KCG+I
Sbjct: 406 -LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 464

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             A  +F ++ R   V WNA+I  +GIHG G +AL  F  +L  G++PD ITF+ LL++C
Sbjct: 465 SFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC 524

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGLV EG+ +F  M  +F I P ++H  CMVD+ GRAG +  AH+FI+NMP  PD  I
Sbjct: 525 SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRI 584

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W ALL ACRIH N+ELG   S ++  +  E+ G +VL+SNIY+  G+W+    +R   +D
Sbjct: 585 WSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKD 644

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
            GLKK PG S IE+N  V  F  G+++H +  +I  +L  L  +MK LGY  + SFV QD
Sbjct: 645 WGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQD 704

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           VEE+EKE IL  HSE+LAIAFGI++     PI + KNLRVCGDCH   KF++ IT+REI 
Sbjct: 705 VEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREIT 764

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+NRFHHFK+G C+CGD+W
Sbjct: 765 VRDANRFHHFKNGTCNCGDFW 785



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/490 (32%), Positives = 261/490 (53%), Gaps = 24/490 (4%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + ++C+ L  ++    +H+   + G    VF  T LV+FYA  G L  ++  F  +S+R+
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGKKIH 166
           V  WN+MI+     G   +AV    Q     G+ P+  T     P +   + L  GK +H
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQ-EEGICPNSSTIVGVLPTVGEAKALGHGKALH 233

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              ++  F+  V V   LL MY +      ARK+FD M VR+  SW+AMI GY  S    
Sbjct: 234 GYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMK 293

Query: 227 EALDILDEMRLEGVSMD--PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           EAL++ D+M L+  +MD  P+T+ S+L  CA+  ++  G  +H YI+K G   ++ + N 
Sbjct: 294 EALELFDQMILKD-AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT 352

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L++MYAK G++  A+R FD M  +D VS+++I++   Q+ +   A   F  MQ +GI PD
Sbjct: 353 LLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPD 412

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T++ +    + L   ++    HG+++ RG F  D +I NA++DMY+K G I+ A  VF
Sbjct: 413 LTTMLGVLPACSHLAALQHGFCSHGYLIVRG-FATDTLICNALIDMYSKCGKISFAREVF 471

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +   D++SWN +I GY  +GL  EA+ +F  +     + P+  T++ +L + SH G +
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFICLLSSCSHSGLV 530

Query: 465 RQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-W 517
            +G     R+  + +  D  +        C+VD+ G+ G ID+A      +P    V  W
Sbjct: 531 MEG-----RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585

Query: 518 NAIISCHGIH 527
           +A++S   IH
Sbjct: 586 SALLSACRIH 595



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 267/537 (49%), Gaps = 16/537 (2%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+AC   ++L + KKIH   LK     D  V   L  +Y       +AR+LFD++P   
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN +I  Y  +G    A+D+   M   GV  +  T   +L  C+    I  G+ IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA---YEQSND 325
           +    GLE ++FV   L++ YAK G++  A R+F  M  RDVV+WN++IA    Y   +D
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
            +        MQ+ GI P+  T+V +   V +     + +++HG+ +RR  F   V++G 
Sbjct: 194 AVQ---LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS-FDNGVVVGT 249

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            ++DMYAK   +  A  +F+ + V++ +SW+ +I GY  +    EA+E+F  M   + ++
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P   T  S+L A + +  L +G K+H  +IK     D+ +   L+ MY KCG IDDA+  
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  +    SV ++AI+S    +G    AL+ FR M   G+ PD  T + +L ACSH   +
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429

Query: 566 SEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
             G   + +++   F     + +   ++D++ + G +  A      M  R D   W A++
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICN--ALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMI 486

Query: 625 GACRIHG-NMELGAVASDRL-FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
               IHG  ME   +  D L   +  +++ +  L+S+   +    EG     +++RD
Sbjct: 487 IGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRD 543



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 15/283 (5%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           +    + ++C KL  + R   LH  ++  G +  +     L++ YA  G +  +   FD 
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDX 372

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           ++ ++  ++++++S  V+ G  + A+  F    L SG+ PD  T   VL AC +L   + 
Sbjct: 373 MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQL-SGIDPDLTTMLGVLPACSHLAALQH 431

Query: 165 IHCS---VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
             CS   ++  GF  D  +  +L+ MY + G  + AR++F+ M   D  SWNAMI GY  
Sbjct: 432 GFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGI 491

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G  +EAL +  ++   G+  D IT   +L  C+ S  ++ G    L+      +F++  
Sbjct: 492 HGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG---RLWFDAMSRDFSIVP 548

Query: 282 SNN----LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
                  ++++  + G++  A      M  E DV  W+++++A
Sbjct: 549 RMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 10/235 (4%)

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
           +  Y+ +L A     +L +  KIH   +KN    D  V   L  +Y  C ++  A  LF 
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           ++P  S + WN II  +  +G  D A++ +  ML  GVRP+  T+  +L ACS    + +
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G    H   + FG++  +     +VD + + G L  A     +M  R D   W A++  C
Sbjct: 128 GVE-IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
            ++G   L   A   + ++  E +       N    VG    V E ++L   + L
Sbjct: 186 SLYG---LCDDAVQLIMQMQEEGI-----CPNSSTIVGVLPTVGEAKALGHGKAL 232


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 291/708 (41%), Positives = 439/708 (62%), Gaps = 7/708 (0%)

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
           +SV  + GRL EA+       L  G R     F  +L+ C   R+L  G+++H ++LK G
Sbjct: 19  VSVLCKTGRLKEALGIMNTMIL-QGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSG 77

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            + + ++  +LL MY + G    AR++FD +  R+  SW AMI  +      +EA    +
Sbjct: 78  IQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M+L G   D +T  S+L      + +  G  +H+ IV+ GLE    V  +L+ MYAK G
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCG 197

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  A  +FD++ E++VV+W  +IA Y Q      A     TMQQA + P+ +T  S+  
Sbjct: 198 DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQ 257

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
                    + + VH +I++ G+  E  ++ N+++ MY K G +  A  +F  LP +DV+
Sbjct: 258 GCTTPAALEHGKKVHRYIIQSGYGRELWVV-NSLITMYCKCGGLEEARKLFSDLPHRDVV 316

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +W  ++TGYAQ G   EAI +F+ M++   I P++ T+ S+L + S    L++G +IH +
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQ-QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQ 375

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS-CHGIHGQGDK 532
           ++      DV++ + LV MY KCG +DDA  +F Q+   + V W AII+ C   HG+  +
Sbjct: 376 LVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCRE 435

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL +F QM  +G++PD +TF S+L+AC+H GLV EG+++F  M  ++GIKP ++HY C V
Sbjct: 436 ALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFV 495

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DL GRAGHL  A N I +MP  P  S+WGALL ACR+H ++E G  A++ + ++D ++ G
Sbjct: 496 DLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDG 555

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
            YV +S+IYA  G++E  ++VR +   R + K PG S IEV+ KV +F+  +++HP+ E+
Sbjct: 556 AYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQ 615

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           IY EL  LT ++K +GYVPD  FVL DV+E++KE IL SHSERLAI +G++ +PP  PI+
Sbjct: 616 IYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIR 675

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLRVCGDCH  TKFIS++  REII RD+ RFHHF DG+CSCGD+W
Sbjct: 676 IVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 167/545 (30%), Positives = 286/545 (52%), Gaps = 19/545 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L Q C +L  +   + +HA ++ SG     +    L++ YA  G L+ +R  FD I 
Sbjct: 50  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            RN+ +W +MI  +V   +  EA  C+    L +G +PD  TF  +L A  N   L  G+
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL-AGCKPDKVTFVSLLNAFTNPELLQLGQ 168

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           K+H  +++ G E +  V  SL+ MY + G  + AR +FD +P ++  +W  +I+GY Q G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               AL++L+ M+   V+ + IT ASIL  C     +  G  +H YI++ G    L+V N
Sbjct: 229 QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVN 288

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI MY K G +  A ++F  +  RDVV+W +++  Y Q      A   F  MQQ GI+P
Sbjct: 289 SLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKP 348

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T  S+ +  +     +  + +H  ++  G+ + DV + +A+V MYAK G ++ A  V
Sbjct: 349 DKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL-DVYLQSALVSMYAKCGSMDDASLV 407

Query: 404 FEGLPVKDVISWNTLITG-YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           F  +  ++V++W  +ITG  AQ+G   EA+E F  M++   I P++ T+ S+L A +HVG
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK-QGIKPDKVTFTSVLSACTHVG 466

Query: 463 ALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP--RSSSVPWN 518
            + +G K H R +         V   +C VD+ G+ G +++A ++   +P     SV W 
Sbjct: 467 LVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSV-WG 524

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQE 577
           A++S   +H   ++       +L   + PD    +V+L +  + +G   + ++   +M++
Sbjct: 525 ALLSACRVHSDVERGERAAENVLK--LDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEK 582

Query: 578 EFGIK 582
              +K
Sbjct: 583 RDVVK 587



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 119/216 (55%), Gaps = 8/216 (3%)

Query: 47  EIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I F  + Q CT    L H K++H  ++ SG  + ++    L+  Y   G L  +R  F 
Sbjct: 249 KITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFS 308

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            + +R+V TW +M++ Y + G   EA++ F +     G++PD  TF  VL +C +   L 
Sbjct: 309 DLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQ-QQGIKPDKMTFTSVLTSCSSPAFLQ 367

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           +GK+IH  ++  G+  DV++ ++L+ MY + G  + A  +F+ M  R+  +W A+I+G C
Sbjct: 368 EGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCC 427

Query: 221 -QSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            Q G   EAL+  D+M+ +G+  D +T  S+L  C 
Sbjct: 428 AQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACT 463


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 302/771 (39%), Positives = 460/771 (59%), Gaps = 7/771 (0%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L + C+ L  ++ +  L+  +G  +     TKLV+ +   G +  +   F+ I  +    
Sbjct: 43  LLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVL 102

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           + +M+  + +   L +A+  F +      + P  Y F  +LK C +  +   GK+IH  +
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMR-DDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K GF  D+F    L +MY +    + ARK+FD MP RD  SWN +++GY Q+G A  AL
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           ++++ M  E +    IT+ S+LP  +    I  G  IH Y ++ G +  + ++  L++MY
Sbjct: 222 EMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMY 281

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G ++ A  +FD M+ER+VVSWNS+I AY Q+ +P  A   F  M   G++P  ++++
Sbjct: 282 AKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVM 341

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                 A L D    R +H   +       +V + N+++ MY K   +++A ++F  L  
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELE-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           + ++SWN +I G+AQNG   EA+  F  M+    + P+  TYVS++ A + +        
Sbjct: 401 RTIVSWNAMILGFAQNGRPIEALNYFSQMQ-ARTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  V++NCL  +VFV T LVDMY KCG I  A  +F  +       WNA+I  +G HG 
Sbjct: 460 IHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGI 519

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G  AL  F +M    +RP+ +TF+S+++ACSHSGLV  G + FHMM+E + I+P + HYG
Sbjct: 520 GKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYG 579

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            MVDL GRAG L  A +FI  MPV+P  +++GA+LGAC+IH N+      ++RLFE++ E
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPE 639

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + GY+VL++NIY     WE V +VR     +GL+KTPG S +E+ N+V  F++G+  HP 
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPS 699

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            +KIY  L  L  ++K  GYVPD + +L  +E+D KE +L+SHSE+LAI+FG++++   +
Sbjct: 700 SKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGT 758

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I + KNLRVC DCHN TK+IS +T REIIVRD  RFHHFK+G CSCGDYW
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/748 (40%), Positives = 464/748 (62%), Gaps = 15/748 (2%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYR--NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           KLV+ Y    +L  +RH FD + +R  NV  WN +I  Y   G   EA+D +Y+  L  G
Sbjct: 56  KLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM-LGYG 114

Query: 142 LRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           + P+ +TFP VLKAC  L    +G++IHC + +L  E +V+V+ +L+  Y + G  + A+
Sbjct: 115 ITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAK 174

Query: 199 KLFDDMPVRDSGSWNAMISGYC-QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           ++FD M  RD  +WN+MISG+    G+  E   +L +M+   VS +  T+  +LP  A+ 
Sbjct: 175 EVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQV 233

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSI 316
           +++  G  IH + V+ G   ++ V   ++++Y K   + +A R+FD M + ++ V+W+++
Sbjct: 234 NSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAM 293

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV---AQLNDCRNSRSVHGFIMR 373
           + AY   +    A   F  +        +L+ V+L +++   A L D      +H + ++
Sbjct: 294 VGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIK 353

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G F+ D+++GN ++ MYAK GIIN A   F  + ++D +S+  +I+GY QNG + E + 
Sbjct: 354 SG-FVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLR 412

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  M+  + INP + T  S+LPA +H+  L  G   H   I      D  +   L+DMY
Sbjct: 413 MFLEMQ-LSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMY 471

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG+ID A  +F ++ +   V WN +I  +GIHG G +AL  F  M  EG++PD +TF+
Sbjct: 472 AKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFI 531

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            L++ACSHSGLV+EG+ +F+ M ++FGI P ++HY CMVDL  RAG     H+FI+ MP+
Sbjct: 532 CLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPL 591

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            PD  +WGALL ACR++ N+ELG   S ++ ++  E+ G +VL+SN+Y+ VG+W+   +V
Sbjct: 592 EPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQV 651

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           R   +++G +K+PG S IE++  V  F  G  R+HP+  +I ++L  L  +MK LGY  +
Sbjct: 652 RFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAE 711

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            S+V QDVEE+EKE +L  HSE+LAIAFGI+S  P   I + KNLRVCGDCH   KFIS 
Sbjct: 712 SSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISL 771

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +T+R+I VRD++RFHHFKDGIC+CGD+W
Sbjct: 772 VTKRDITVRDASRFHHFKDGICNCGDFW 799



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 240/459 (52%), Gaps = 24/459 (5%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY-VRCGRLSEAVDCFYQFT 137
           V+ ST LV+FYA  G L  ++  FD +  R+V  WNSMIS + +  G   E      Q  
Sbjct: 154 VYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQ-- 211

Query: 138 LTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           + + + P+  T   VL A     +L  GK+IH   ++ GF  DV V   +L +Y +    
Sbjct: 212 MQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCI 271

Query: 195 NVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMRL---EGVSMDPITVASI 250
           + AR++FD M  V++  +W+AM+  Y       EAL++  ++ +   + + +  +T+A++
Sbjct: 272 DYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATV 331

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           + VCA   ++ +G  +H Y +K G   +L V N L++MYAK G++  A+R F++M  RD 
Sbjct: 332 IRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDA 391

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VS+ +II+ Y Q+ +       F  MQ +GI P+  TL S+    A L         H +
Sbjct: 392 VSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY 451

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
            +  G F  D +I NA++DMYAK G I++A  VF+ +  + ++SWNT+I  Y  +G+  E
Sbjct: 452 AIICG-FTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLE 510

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA---- 486
           A+ +F  M+    + P+  T++ ++ A SH G + +G     +   N +  D  +     
Sbjct: 511 ALLLFDNMQS-EGLKPDDVTFICLISACSHSGLVAEG-----KYWFNAMTQDFGIIPRME 564

Query: 487 --TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
              C+VD+  + G   +  S   ++P    V  W A++S
Sbjct: 565 HYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLS 603



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 8/307 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LH   + SG +  +     L++ YA  G ++ +   F+ +  R+  ++ ++IS YV+ G 
Sbjct: 347 LHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGN 406

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
             E +  F +  L SG+ P+  T   VL AC +L     G   HC  +  GF  D  +  
Sbjct: 407 SEEGLRMFLEMQL-SGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICN 465

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+ MY + G  + ARK+FD M  R   SWN MI  Y   G  +EAL + D M+ EG+  
Sbjct: 466 ALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKP 525

Query: 243 DPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           D +T   ++  C+ S  +  G    +      G+   +     ++++ ++ G+ +     
Sbjct: 526 DDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSF 585

Query: 302 FDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP--DLLTLVSLTSIVAQL 358
            ++M +E DV  W ++++A     +     G    +Q+ G +   + + L ++ S V + 
Sbjct: 586 IEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRW 645

Query: 359 NDCRNSR 365
           +D    R
Sbjct: 646 DDAAQVR 652



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 72/181 (39%), Gaps = 23/181 (12%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           LH+    H   ++ G          L++ YA  G +  +R  FD +  R + +WN+MI  
Sbjct: 442 LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIA 501

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW--- 176
           Y   G   EA+  F     + GL+PD  TF  ++ AC         H  ++  G  W   
Sbjct: 502 YGIHGIGLEALLLFDNMQ-SEGLKPDDVTFICLISACS--------HSGLVAEGKYWFNA 552

Query: 177 ---DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAV 226
              D  +   + H  C      R GL        + MP+  D   W A++S  C+    V
Sbjct: 553 MTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSA-CRVYKNV 611

Query: 227 E 227
           E
Sbjct: 612 E 612


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 305/772 (39%), Positives = 457/772 (59%), Gaps = 18/772 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K  HA +VVSG     F S  L+  Y+  G LS +R  FD    R++ TWN+++  Y   
Sbjct: 97  KCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAAS 156

Query: 124 -----GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFE 175
                G   E +  F     + G      T  PVLK C N   L   + +H   +K+G E
Sbjct: 157 VDSNDGNAQEGLHLFRLLRASLGSTTRM-TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 215

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
           WDVFV+ +L+++Y + G    AR LFD M  RD   WN M+ GY Q G   EA  +  E 
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 275

Query: 236 RLEGVSMDPITVASILPVC--ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
              G+  D  +V  IL  C  A +D++  G  +H   VK GL+ ++ V+N+L+NMY+K G
Sbjct: 276 HRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 335

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT- 352
               A  VF+ M   D++SWNS+I++  QS+    +   F  +   G++PD  TL S+T 
Sbjct: 336 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITL 395

Query: 353 SIVAQLNDC----RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           +  A+   C       + +H   ++ G F  D+ + + ++DMY K G + +A  VF  + 
Sbjct: 396 ATAAKACGCLVLLDQGKQIHAHAIKAG-FDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS 454

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
             D ++W ++I+G   NG   +A+ ++  M + + + P++ T+ +++ A S V AL QG 
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQ-SRVMPDEYTFATLIKASSCVTALEQGR 513

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           ++HA VIK     D FV T LVDMY KCG I+DA  LF ++   +   WNA++     HG
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHG 573

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
             ++A+N F+ M   G+ PD ++F+ +L+ACSH+GL SE   Y H M  ++GI+P ++HY
Sbjct: 574 NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHY 633

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            C+VD  GRAG +  A   I+ MP +  ASI  ALLGACRI G++E G   + RLF ++ 
Sbjct: 634 SCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEP 693

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            +   YVL+SNIYA   +W+ V + R + + + +KK PG+S I+V N + +F   +R+HP
Sbjct: 694 FDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHP 753

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           + + IYD++  +   ++  GYVPD  FVL DVE++EKE  L  HSE+LAIA+G+IS+P  
Sbjct: 754 QADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPAS 813

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + I++ KNLRVCGDCHN  K+IS++ EREI++RD+NRFHHF+DG+CSCGDYW
Sbjct: 814 TTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/816 (38%), Positives = 479/816 (58%), Gaps = 21/816 (2%)

Query: 9   KDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKR 65
           K  + C++  L  A   L  + +  L ++  C            + Q C +   L   KR
Sbjct: 67  KINKFCEMGDLRNAIELLTKSKSYELGLNSYC-----------SVLQLCAEKKSLEDGKR 115

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H++++ +G         KLV  Y N GDL   R  FD I    V+ WN ++S Y + G 
Sbjct: 116 VHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGN 175

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGKKIHCSVLKLGFEWDVFVAA 182
             E+V  F +     G+  + YTF  VLK   A   + + K++H  VLKLGF  +  V  
Sbjct: 176 FRESVSLFKKMQ-KLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVN 234

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+  Y +FG    A  LFD++   D  SWN+MI+G   +G +   L+I  +M + GV +
Sbjct: 235 SLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV 294

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T+ S+L  CA   N+  G  +H + VK      +  SN L++MY+K G +  A  VF
Sbjct: 295 DLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF 354

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
            +M +  +VSW SIIAAY +      A G F  MQ  G++PD+ T+ S+    A  +   
Sbjct: 355 VKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLD 414

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             R VH ++++ G    ++ + NA+++MYAK G +  A  VF  +PVKD++SWNT+I GY
Sbjct: 415 KGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGY 473

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           +QN L +EA+E+F  M++  +  P+  T   +LPA + + AL +G +IH  +++     D
Sbjct: 474 SQNLLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 531

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           + VA  LVDMY KCG +  A  LF  +P+   + W  +I+ +G+HG G++A++ F +M  
Sbjct: 532 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 591

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G+ PD  +F ++L ACSHSGL++EG ++F+ M+ E G++P L+HY C+VDL  R G+L 
Sbjct: 592 AGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 651

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+ FI++MP++PD +IWG LL  CRIH +++L    ++ +FE++ +N  YYV+++N+YA
Sbjct: 652 KAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYA 711

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
              KWE V ++R   + RG K+ PG S IEV  K +IF  GN  HP+ +KI   L  LT 
Sbjct: 712 EAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTM 771

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           +M++  Y     +VL + ++ EKE I   HSE+ A+AFGI++ PP   +++ KN RVCGD
Sbjct: 772 QMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGD 831

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           CH   KF+S+ T+ EI++RDSNRFHHFKDG+CSC D
Sbjct: 832 CHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  583 bits (1504), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 313/803 (38%), Positives = 478/803 (59%), Gaps = 9/803 (1%)

Query: 24  RPLFSAAANSLQISPDCLE--NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFS 81
           RP+++AA +S  +S       N++  +    L Q    L HVK +HA ++ +      F 
Sbjct: 22  RPIYNAAPSSTFVSVHHAPFFNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFL 81

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           + KL+  Y++LG L  +R+ FD  S       N+MI+ ++R  +  E V   ++   +  
Sbjct: 82  AAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHME-VPRLFRMMGSCD 140

Query: 142 LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           +  + YT    LKAC +L+D   G +I  + ++ GF   ++V +S+++   + G    A+
Sbjct: 141 IEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQ 200

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           K+FD MP +D   WN++I GY Q G   E++ +  EM   G+   P+T+A++L  C +S 
Sbjct: 201 KVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSG 260

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
               G+  H Y++  G+  ++FV  +L++MY+  G    A  VFD M  R ++SWN++I+
Sbjct: 261 LKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMIS 320

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y Q+     ++  F  + Q+G   D  TLVSL    +Q +D  N R +H  I+R+    
Sbjct: 321 GYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKE-LE 379

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             +++  A+VDMY+K G I  A  VF  +  K+VI+W  ++ G +QNG A +A+++F  M
Sbjct: 380 SHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQM 439

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +E  ++  N  T VS++   +H+G+L +G  +HA  I++   FD  + + L+DMY KCG+
Sbjct: 440 QE-EKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGK 498

Query: 499 IDDAMSLFY-QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           I  A  LF  +      +  N++I  +G+HG G  AL  + +M++E ++P+  TFVSLLT
Sbjct: 499 IHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLT 558

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSHSGLV EG+  FH M+ +  ++P  KHY C+VDL  RAG L  A   ++ MP +P  
Sbjct: 559 ACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPST 618

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            +  ALL  CR H N  +G   +DRL  +D  N G YV++SNIYA   KWE V+ +R L 
Sbjct: 619 DVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLM 678

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           R +G+KK PG+S IEV NKV  F+  + +HP +  IY  L NL  ++++ GY+PD S VL
Sbjct: 679 RMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVL 738

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
           +DV E  K  +L  HSERLAIAFG++S+P  S I+I KNLRVC DCHN TK+IS+I +RE
Sbjct: 739 RDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQRE 798

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           IIVRD+NRFHHF +G CSC D+W
Sbjct: 799 IIVRDANRFHHFVNGKCSCNDFW 821


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 303/762 (39%), Positives = 460/762 (60%), Gaps = 7/762 (0%)

Query: 60   LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            L   KR+H++++ +G         KLV  Y N GDL   R  FD I    V+ WN ++S 
Sbjct: 385  LEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 444

Query: 120  YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGKKIHCSVLKLGFEW 176
            Y + G   E+V  F +     G+  + YTF  VLK   A   + + K++H  VLKLGF  
Sbjct: 445  YAKIGNFRESVSLFKKMQ-KLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 503

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            +  V  SL+  Y +FG    A  LFD++   D  SWN+MI+G   +G +   L+I  +M 
Sbjct: 504  NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            + GV +D  T+ S+L   A   N+  G  +H + VK      +  SN L++MY+K G + 
Sbjct: 564  ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 623

Query: 297  HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
             A  VF +M +  +VSW S IAAY +      A G F  MQ  G++PD+ T+ S+    A
Sbjct: 624  GATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 683

Query: 357  QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
              +     R VH ++++ G    ++ + NA+++MYAK G +  A  VF  +PVKD++SWN
Sbjct: 684  CSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 742

Query: 417  TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            T+I GY+QN L +EA+E+F  M++  +  P+  T   +LPA + + AL +G +IH  +++
Sbjct: 743  TMIGGYSQNSLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALDKGREIHGHILR 800

Query: 477  NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
                 D+ VA  LVDMY KCG +  A  LF  +P+   + W  +I+ +G+HG G++A++ 
Sbjct: 801  RGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAIST 860

Query: 537  FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
            F +M   G+ PD  +F  +L ACSHSGL++EG ++F+ M+ E G++P L+HY C+VDL  
Sbjct: 861  FNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLA 920

Query: 597  RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
            R G+L  A+ FI++MP++PD +IWG LL  CRIH +++L    ++ +FE++ +N  YYV+
Sbjct: 921  RMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVV 980

Query: 657  MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
            ++N+YA   KWE V ++R   + RG K+ PG S IEV  K +IF  GN  HP+ ++I   
Sbjct: 981  LANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVL 1040

Query: 717  LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
            LR LT +M++  Y     +VL + ++ EKE I   HSE+ A+AFGI++ PP   +++ KN
Sbjct: 1041 LRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKN 1100

Query: 777  LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
             RVCGDCH   KF+S+ T+REI++RDSNRFHHFKDG+CSC D
Sbjct: 1101 QRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/775 (39%), Positives = 465/775 (60%), Gaps = 7/775 (0%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  L  + T L  + ++ A L++ G    + S TKL + + +LG ++  R  F+ +S  +
Sbjct: 17  FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPD 76

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           ++ +N +I  +   G    ++  +      + LRPD +T+   + A   L D   G  +H
Sbjct: 77  LFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLH 136

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +  G   ++FV ++++ +Y +F  A +ARK+FD MP RD+  WN MISG+ ++    
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +++ +  +M   G+S D  T+A++L   A       G+ I     K GL  +++V   LI
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           ++Y+K G       +FDQ+ + D++S+N++I+ Y  +++  +A   F  +  +G + +  
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           TLV L  +    N  + SR +    ++ G  ++  +   A+  +Y +L  +  A  +F+ 
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV-STALTTVYCRLNEVQFARQLFDE 375

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
            P K + SWN +I+GY QNGL   AI +FQ M    +++PN  T  SIL A + +GAL  
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEM--MPQLSPNPVTVTSILSACAQLGALSI 433

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  +H  +    L  +V+V+T LVDMY KCG I +A  LF  +   + V WNA+I+ +G+
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG G +AL  F +ML  G+ P  +TF+S+L ACSHSGLVSEG   FH M   +G +P  +
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HY CMVD+ GRAG L  A  FI+ MP+ P  ++WGALLGAC IH N E+  VAS RLF++
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL 613

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           D ENVGYYVL+SNIY+    +     VR + + R L KTPG + IE++++  +F +G+R+
Sbjct: 614 DPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRS 673

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDK-SFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
           HP+   I++ L  LT KM+  GY  +  +  L DVE++EKE ++  HSE+LAIAFG+IS+
Sbjct: 674 HPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST 733

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            P + I+I KNLRVC DCH  TKFIS+ITER I+VRD+NRFHHFK+GICSCGDYW
Sbjct: 734 KPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 460/771 (59%), Gaps = 7/771 (0%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L + C+ L  ++++  L+  +G  +  F  TKLV+ +   G +  +   F+ I  +    
Sbjct: 43  LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           +++M+  + +   L +A+  F +      + P  Y F  +LK C +  +   GK+IH  +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K GF  D+F    L +MY +    N ARK+FD MP RD  SWN +++GY Q+G A  AL
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +++  M  E +    IT+ S+LP  +    I  G  IH Y ++ G +  + +S  L++MY
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G +  A ++FD M+ER+VVSWNS+I AY Q+ +P  A   F  M   G++P  ++++
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                 A L D    R +H   +  G    +V + N+++ MY K   +++A ++F  L  
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           + ++SWN +I G+AQNG   +A+  F  M     + P+  TYVS++ A + +        
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  V+++CL  +VFV T LVDMY KCG I  A  +F  +       WNA+I  +G HG 
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G  AL  F +M    ++P+ +TF+S+++ACSHSGLV  G + F+MM+E + I+  + HYG
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            MVDL GRAG L  A +FI  MPV+P  +++GA+LGAC+IH N+     A++RLFE++ +
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + GY+VL++NIY     WE V +VR     +GL+KTPG S +E+ N+V  F++G+  HP 
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            +KIY  L  L   +K  GYVPD + VL  VE D KE +L++HSE+LAI+FG++++   +
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGT 758

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I + KNLRVC DCHN TK+IS +T REI+VRD  RFHHFK+G CSCGDYW
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/775 (39%), Positives = 465/775 (60%), Gaps = 7/775 (0%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  L  + T L  + ++ A L++ G    + S TKL + + +LG ++  R  F+ +S  +
Sbjct: 17  FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPD 76

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           ++ +N +I  +   G    ++  +      + LRPD +T+   + A   L D   G  +H
Sbjct: 77  LFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLH 136

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +  G   ++FV ++++ +Y +F  A +ARK+FD MP RD+  WN MISG+ ++    
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +++ +  +M   G+S D  T+A++L   A       G+ I     K GL  +++V   LI
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           ++Y+K G       +FDQ+ + D++S+N++I+ Y  +++  +A   F  +  +G + +  
Sbjct: 257 SLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSS 316

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           TLV L  +    N  + SR +    ++ G  ++  +   A+  +Y +L  +  A  +F+ 
Sbjct: 317 TLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSV-STALTTVYCRLNEVQFARQLFDE 375

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
            P K + SWN +I+GY QNGL   AI +FQ M    +++PN  T  SIL A + +GAL  
Sbjct: 376 SPEKSLASWNAMISGYTQNGLTDRAISLFQEM--MPQLSPNPVTVTSILSACAQLGALSI 433

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  +H  +    L  +V+V+T LVDMY KCG I +A  LF  +   + V WNA+I+ +G+
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG G +AL  F +ML  G+ P  +TF+S+L ACSHSGLVSEG   FH M   +G +P  +
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HY CMVD+ GRAG L  A  FI+ MP+ P  ++WGALLGAC IH N E+  VAS RLF++
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL 613

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           D ENVGYYVL+SNIY+    +     VR + + R L KTPG + IE++++  +F +G+R+
Sbjct: 614 DPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRS 673

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDK-SFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
           HP+   I++ L  LT KM+  GY  +  +  L DVE++EKE ++  HSE+LAIAFG+IS+
Sbjct: 674 HPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIST 733

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            P + I+I KNLRVC DCH  TKFIS+ITER I+VRD+NRFHHFK+GICSCGDYW
Sbjct: 734 KPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/741 (41%), Positives = 442/741 (59%), Gaps = 5/741 (0%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           +KL   Y N GDL  +   FD +       WN +++   + G  S ++  F +  ++SG+
Sbjct: 133 SKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGV 191

Query: 143 RPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
             D YTF  V K+    R++  G+++H  +LK GF     V  SL+  Y +    + ARK
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARK 251

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +FD+M  RD  SWN++I+GY  +G A + L +  +M   G+ +D  T+ S+   CA S  
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRL 311

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           I  G  +H + VK          N L++MY+K G +  A  VF +M  R VVS+ S+IA 
Sbjct: 312 ISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAG 371

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           Y +      A   F  M++ GI PD+ T+ ++ +  A+       + VH +I        
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGF- 430

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D+ + NA++DMYAK G +  A  VF  + VKD+ISWNT+I GY++N  A+EA+ +F ++ 
Sbjct: 431 DIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLL 490

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
                +P++ T   +LPA + + A  +G +IH  +++N    D  VA  LVDMY KCG +
Sbjct: 491 VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             A  LF  +     V W  +I+ +G+HG G +A+  F QM   G+ PD I+FVSLL AC
Sbjct: 551 LLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYAC 610

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGLV EG R+F++M+ E  I+P ++HY C+VD+  R G+L  A+ FI+NMP+ PDA+I
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATI 670

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WGALL  CRIH +++L    ++++FE++ EN GYYVLM+NIYA   KWE V  +R     
Sbjct: 671 WGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQ 730

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGL+K PG S IE+  +V+IF  G+ ++P+ EKI   LR + A+M   GY P   + L D
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALID 790

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
            EE EKE  L  HSE+LA+A GIISS     I++ KNLRVCGDCH   KF+S++T REI+
Sbjct: 791 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 850

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           +RDSNRFH FKDG CSC  +W
Sbjct: 851 LRDSNRFHQFKDGHCSCRGFW 871



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 284/553 (51%), Gaps = 19/553 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F S   ++  ++LH  ++ SG  +       LV FY     +  +R  FD ++ R+V +W
Sbjct: 205 FSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISW 264

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           NS+I+ YV  G   + +  F Q  L SG+  D  T   V   C   R +  G+ +HC  +
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQM-LFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGV 323

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K  F  +     +LL MY + G  + A+ +F +M  R   S+ +MI+GY + G A EA+ 
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVK 383

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + +EM  EG+S D  TV ++L  CAR+  +  G  +H +I ++ + F++FVSN L++MYA
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYA 443

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLV 349
           K G MR A  VF +M  +D++SWN++I  Y ++     A   F  +  +    PD  T+ 
Sbjct: 444 KCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVA 503

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            +    A L+     R +HG+IMR G+F  D  + N++VDMYAK G +  A  +F+ +  
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLARLLFDDITS 562

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD++SW  +I GY  +G   EAI +F  M +   I P++ ++VS+L A SH G + +G +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEPDEISFVSLLYACSHSGLVDEGWR 621

Query: 470 IHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
               +   C +   V    C+VDM  + G +  A      +P    +  W A++    IH
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM--MQEEFGIKPHL 585
                A     ++ +  + P++  +  L+     + + +E +++  +  +++  G +   
Sbjct: 682 HDVKLAERVAEKVFE--LEPENTGYYVLM-----ANIYAEAEKWEEVKRLRKRIGQRGLR 734

Query: 586 KHYGCM-VDLFGR 597
           K+ GC  +++ GR
Sbjct: 735 KNPGCSWIEIKGR 747



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 275/546 (50%), Gaps = 17/546 (3%)

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
            + D + S  TFD    R+V   N+ +  +   G L  AV   +   ++     D  T  
Sbjct: 46  TVSDRADSITTFD----RSVTDANTQLRRFCESGNLKNAVKLLH---VSGKWDIDPRTLC 98

Query: 151 PVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            VL+ C   ++L DGK++   +   GF  D  + + L  MY   G    A ++FD + + 
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIE 158

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
            +  WN +++   +SG+   ++ +  +M   GV MD  T + +    +   ++  G  +H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLH 218

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            YI+K G      V N+L+  Y K   +  A +VFD+M ERDV+SWNSII  Y  +    
Sbjct: 219 GYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
                F  M  +GI+ DL T+VS+ +  A        R+VH F ++  +  ED    N +
Sbjct: 279 KGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC-NTL 337

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMY+K G ++SA  VF  +  + V+S+ ++I GYA+ GLA EA+++F+ MEE   I+P+
Sbjct: 338 LDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPD 396

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T  ++L   +    L +G ++H  + +N + FD+FV+  L+DMY KCG + +A  +F 
Sbjct: 397 VYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFS 456

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVS 566
           ++     + WN +I  +  +   ++AL+ F  +L E    PD  T   +L AC+      
Sbjct: 457 EMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFD 516

Query: 567 EGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
           +G+  + ++M+  +    H+ +   +VD++ + G L +A     ++  + D   W  ++ 
Sbjct: 517 KGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLARLLFDDITSK-DLVSWTVMIA 573

Query: 626 ACRIHG 631
              +HG
Sbjct: 574 GYGMHG 579


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/780 (38%), Positives = 462/780 (59%), Gaps = 9/780 (1%)

Query: 47  EIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  + ++C+    L+  +++H + VV+G     F +  LV  YA  G L  SR  F 
Sbjct: 82  EFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFG 141

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG- 162
            I  RNV +WN++ S YV+     EAV  F +  + SG+ P+ ++   +L AC  L +G 
Sbjct: 142 GIVERNVVSWNALFSCYVQSELCGEAVGLFKEM-VRSGIMPNEFSISIILNACAGLQEGD 200

Query: 163 --KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
             +KIH  +LK+G + D F A +L+ MY + G    A  +F D+   D  SWNA+I+G  
Sbjct: 201 LGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCV 260

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
                  AL +LDEM+  G   +  T++S L  CA       G  +H  ++K     +LF
Sbjct: 261 LHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLF 320

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            +  L++MY+K  MM  A R +D M ++D+++WN++I+ Y Q  D + A   F+ M    
Sbjct: 321 AAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED 380

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I  +  TL ++   VA L   +  + +H   ++ G +  D  + N+++D Y K   I+ A
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY-SDFYVINSLLDTYGKCNHIDEA 439

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +FE    +D++++ ++IT Y+Q G   EA++++  M++  +I P+     S+L A ++
Sbjct: 440 SKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA-DIKPDPFICSSLLNACAN 498

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A  QG ++H   IK     D+F +  LV+MY KCG I+DA   F ++P    V W+A+
Sbjct: 499 LSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAM 558

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I  +  HG G +AL  F QML +GV P+HIT VS+L AC+H+GLV+EG++YF  M+  FG
Sbjct: 559 IGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFG 618

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           IKP  +HY CM+DL GR+G L  A   + ++P   D  +WGALLGA RIH N+ELG  A+
Sbjct: 619 IKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAA 678

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
             LF+++ E  G +VL++NIYA+ G WE V +VR   +D  +KK PG S IE+ +KV  F
Sbjct: 679 KMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTF 738

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+R+H + ++IY +L  L   +   GY       + +V++ EKE +L  HSE+LA+AF
Sbjct: 739 IVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAF 798

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+I++PP  PI++ KNLR+C DCH + KF+ +I  REIIVRD NRFHHFKDG CSCGDYW
Sbjct: 799 GLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 179/571 (31%), Positives = 302/571 (52%), Gaps = 8/571 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
            LHA L+  G  +       LV  Y+      ++R   D  S  +V +W+S++S YV+ G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
            + EA+  F +  L  G++ + +TFP VLKAC   R+L  G+K+H   +  GFE D FVA
Sbjct: 62  FVEEALLVFNEMCLL-GVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY + GL + +R+LF  +  R+  SWNA+ S Y QS    EA+ +  EM   G+ 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            +  +++ IL  CA       G  IH  ++K GL+ + F +N L++MY+K G +  A+ V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F  +   DVVSWN+IIA     +    A      M+ +G +P++ TL S     A +   
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              R +H  +++      D+     +VDMY+K  +++ A   ++ +P KD+I+WN LI+G
Sbjct: 301 ELGRQLHSSLIKMDAH-SDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           Y+Q G   +A+ +F  M    +I+ NQ T  ++L + + + A++   +IH   IK+ +  
Sbjct: 360 YSQCGDHLDAVSLFSKMFS-EDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYS 418

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D +V   L+D YGKC  ID+A  +F +      V + ++I+ +  +G G++AL  + QM 
Sbjct: 419 DFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQ 478

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           D  ++PD     SLL AC++     +G++  H+   +FG    +     +V+++ + G +
Sbjct: 479 DADIKPDPFICSSLLNACANLSAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCGSI 537

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             A      +P R   S W A++G    HG+
Sbjct: 538 EDADRAFSEIPNRGIVS-WSAMIGGYAQHGH 567



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 3/166 (1%)

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
           +++HA +IK     D  +   LV +Y KC R   A  L  +      V W++++S +  +
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G  ++AL  F +M   GV+ +  TF S+L ACS    ++ G R  H M    G +     
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMG-RKVHGMAVVTGFESDGFV 119

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
              +V ++ + G L  +      +  R   S W AL  +C +   +
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVS-WNALF-SCYVQSEL 163


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 298/781 (38%), Positives = 467/781 (59%), Gaps = 10/781 (1%)

Query: 47  EIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I +  +  +C    +L + K++H+ ++ +G  +       L++ Y   GDL  +R  F 
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA 187

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            IS R+V ++N+M+ +Y +   + E +  F Q + + G+ PD  T+  +L A      L 
Sbjct: 188 GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMS-SEGISPDKVTYINLLDAFTTPSMLD 246

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           +GK+IH   ++ G   D+ V  +L+ M  R G  + A++ F  +  RD   +NA+I+   
Sbjct: 247 EGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALA 306

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G+ VEA +    MR +GV+++  T  SIL  C+ S  + +G LIH +I + G   ++ 
Sbjct: 307 QHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           + N LI+MYA+ G +  A  +F  M +RD++SWN+IIA Y +  D   A   +  MQ  G
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++P  +T + L S  A  +   + + +H  I+R G    +  + NA+++MY + G +  A
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG-IKSNGHLANALMNMYRRCGSLMEA 485

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFEG   +DVISWN++I G+AQ+G    A ++FQ M+   E+ P+  T+ S+L    +
Sbjct: 486 QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQN-EELEPDNITFASVLSGCKN 544

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
             AL  G +IH R+ ++ L  DV +   L++MY +CG + DA ++F+ +     + W A+
Sbjct: 545 PEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAM 604

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           I      G+  KA+  F QM +EG RP D  TF S+L+AC+H+GLV EG + F  M+ E+
Sbjct: 605 IGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEY 664

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           G+ P ++HYGC+V L GRA     A   I  MP  PDA++W  LLGACRIHGN+ L   A
Sbjct: 665 GVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHA 724

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           ++   ++++ N   Y+L+SN+YA  G+W+ V ++R +   RG++K PG S IEV+N +  
Sbjct: 725 ANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHE 784

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F   +R+HP+  +IY EL+ L+ +M+  GY PD   VL D+ +  +E  L +HSERLAIA
Sbjct: 785 FIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIA 844

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           +G+I +PP +PI+IFKNLR+CGDCH  +KFIS++  REII RDSNRFH FK+G CSC DY
Sbjct: 845 YGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDY 904

Query: 820 W 820
           W
Sbjct: 905 W 905



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 177/607 (29%), Positives = 306/607 (50%), Gaps = 15/607 (2%)

Query: 31  ANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVN 87
           +N+ Q  P     E+    +  L Q+CT+   L   KR+HA +V +G    +F S  L+N
Sbjct: 15  SNTHQPRP----TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLIN 70

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y     +  +   F  +  R+V +WNS+IS Y + G   +A   F +    +G  P+  
Sbjct: 71  MYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ-NAGFIPNKI 129

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T+  +L AC     L +GKKIH  ++K G++ D  V  SLL MY + G    AR++F  +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD  S+N M+  Y Q     E L +  +M  EG+S D +T  ++L        +  G 
Sbjct: 190 SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGK 249

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            IH   V+ GL  ++ V   L+ M  + G +  A + F  + +RDVV +N++IAA  Q  
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHG 309

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             + A   +  M+  G+  +  T +S+ +  +        + +H  I   G    DV IG
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG-HSSDVQIG 368

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           NA++ MYA+ G +  A  +F  +P +D+ISWN +I GYA+     EA+ +++ M+    +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS-EGV 427

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P + T++ +L A ++  A   G  IH  ++++ +  +  +A  L++MY +CG + +A +
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F        + WN++I+ H  HG  + A   F++M +E + PD+ITF S+L+ C +   
Sbjct: 488 VFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEA 547

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           +  G++  H    E G++  +     +++++ R G L  A N   ++  R D   W A++
Sbjct: 548 LELGKQ-IHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMI 605

Query: 625 GACRIHG 631
           G C   G
Sbjct: 606 GGCADQG 612



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 168/548 (30%), Positives = 280/548 (51%), Gaps = 26/548 (4%)

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
           CG   E V   +Q   T     D  T+  +L+ C   R L + K+IH  +++ G   D+F
Sbjct: 7   CGPDREDVSNTHQPRPTE---TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIF 63

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           ++  L++MY +      A ++F +MP RD  SWN++IS Y Q G   +A  + +EM+  G
Sbjct: 64  LSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG 123

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              + IT  SIL  C     + +G  IH  I+K G + +  V N+L++MY K G +  A 
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR 183

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VF  +  RDVVS+N+++  Y Q        G F  M   GI PD +T ++L       +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                + +H   +  G    D+ +G A+V M  + G ++SA   F+G+  +DV+ +N LI
Sbjct: 244 MLDEGKRIHKLTVEEG-LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALI 302

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
              AQ+G   EA E +  M   + +  N+ TY+SIL A S   AL  G  IH+ + ++  
Sbjct: 303 AALAQHGHNVEAFEQYYRMRS-DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV +   L+ MY +CG +  A  LFY +P+   + WNAII+ +       +A+  ++Q
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF---GIKPHLKHYGCMVDLFG 596
           M  EGV+P  +TF+ LL+AC++S   ++G+    M+ E+    GIK +      +++++ 
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGK----MIHEDILRSGIKSNGHLANALMNMYR 477

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF------EVDSEN 650
           R G L  A N  +    R D   W +++     HG+ E     + +LF      E++ +N
Sbjct: 478 RCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYE----TAYKLFQEMQNEELEPDN 532

Query: 651 VGYYVLMS 658
           + +  ++S
Sbjct: 533 ITFASVLS 540



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 161/502 (32%), Positives = 253/502 (50%), Gaps = 11/502 (2%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           +S  ISPD    +   I+  D F + + L   KR+H L V  G    +   T LV     
Sbjct: 221 SSEGISPD----KVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVR 276

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            GD+  ++  F  I+ R+V  +N++I+   + G   EA + +Y+   + G+  +  T+  
Sbjct: 277 CGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR-SDGVALNRTTYLS 335

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L AC   + L  GK IH  + + G   DV +  +L+ MY R G    AR+LF  MP RD
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWNA+I+GY +  +  EA+ +  +M+ EGV    +T   +L  CA S     G +IH 
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            I++ G++ N  ++N L+NMY + G +  A  VF+    RDV+SWNS+IA + Q     T
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A+  F  MQ   ++PD +T  S+ S           + +HG I   G  + DV +GNA++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL-DVNLGNALI 574

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           +MY + G +  A  VF  L  +DV+SW  +I G A  G   +AIE+F  M+      P+ 
Sbjct: 575 NMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDG 634

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA-TCLVDMYGKCGRIDDAMSLFY 507
            T+ SIL A +H G + +G +I + +              CLV + G+  R  +A +L  
Sbjct: 635 STFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLIN 694

Query: 508 QVP-RSSSVPWNAIISCHGIHG 528
           Q+P    +  W  ++    IHG
Sbjct: 695 QMPFPPDAAVWETLLGACRIHG 716


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 309/771 (40%), Positives = 460/771 (59%), Gaps = 2/771 (0%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  L    + LH + + HA ++++G    + + TKL +  ++L  +  +   F  I   +
Sbjct: 13  FLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPD 72

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSV 169
           ++ +N +I  +      S AV  +     ++ L PD +T+  V+    +L  G  +H   
Sbjct: 73  LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS 132

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  GF  D+FV ++++  Y +F     ARK+FD M  RD+  WN M+SG  ++    EA+
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            I  +M   G+  D  TVA++LP  A   ++  G+ I    +K G   + +V   L  +Y
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  +F Q+ + D+VS+N++I+ Y  +N+  ++   F  +  +G + +  ++V
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            L  +         +R +HGF  + G      +   A+  +Y++L  I SA  +F+    
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVS-TALTTVYSRLNEIESARLLFDESSE 371

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K + SWN +I+GYAQNGL  +AI +FQ M++C E+ PN  T  SIL A + +GAL  G  
Sbjct: 372 KSLASWNAMISGYAQNGLTEKAISLFQEMQKC-EVRPNPVTVTSILSACAQLGALSLGKW 430

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H  + +     ++FV+T L+DMY KCG I +A  LF  +P  ++V WNA+IS +G+HG 
Sbjct: 431 VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGY 490

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +ALN F +ML   V P  +TF+S+L ACSH+GLV EG   F  M  + G +P  +HY 
Sbjct: 491 GHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA 550

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GRAG+L  A +FI+ MPV P   +WGALLGAC IH +  L  +ASD+LFE+D +
Sbjct: 551 CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQ 610

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           NVGYYVL+SNIY+    +     VR + + R L KTPG + IEV N + IF +G+++HP+
Sbjct: 611 NVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQ 670

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
              IY  L  LT KM+  G+  +    L DVEE+EKE ++  HSE+LAIAFG+I+S P +
Sbjct: 671 ATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGT 730

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I+I KNLRVC DCHN TKFIS+ITER I+VRD+NRFHHFKDGICSCGDYW
Sbjct: 731 EIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 138/282 (48%), Gaps = 6/282 (2%)

Query: 43  NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           N S  +    +F     LH  + +H     SG +     ST L   Y+ L ++  +R  F
Sbjct: 307 NSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLF 366

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD- 161
           D  S +++ +WN+MIS Y + G   +A+  F +      +RP+  T   +L AC  L   
Sbjct: 367 DESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCE-VRPNPVTVTSILSACAQLGAL 425

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             GK +H  + +  FE ++FV+ +L+ MY + G    A++LF  MP +++ +WNAMISGY
Sbjct: 426 SLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGY 485

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV-KHGLEFN 278
              G   EAL++ +EM    VS   +T  S+L  C+ +  +  G  I   +V  HG E  
Sbjct: 486 GLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPL 545

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
                 ++++  + G +  AL    +M +E     W +++ A
Sbjct: 546 PEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGA 587


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 300/777 (38%), Positives = 452/777 (58%), Gaps = 9/777 (1%)

Query: 50   FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
            F  +  +CTK+   K   +LH L++  G     +    LV  Y+ LG+   +   F+ + 
Sbjct: 274  FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333

Query: 107  YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
             R+  ++NS+IS   + G   +A++ F +  L   L+PD  T   +L AC +   L+ GK
Sbjct: 334  QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDC-LKPDCVTVASLLSACSSVGALLVGK 392

Query: 164  KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            + H   +K G   D+ +  +LL +Y +      A + F      +   WN M+  Y    
Sbjct: 393  QFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLD 452

Query: 224  NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            N  E+  I  +M++EG+  +  T  SIL  C+    +  G  IH  ++K G +FN++VS+
Sbjct: 453  NLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512

Query: 284  NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             LI+MYAK G + HAL++F ++ E+DVVSW ++IA Y Q      A   F  MQ  GI  
Sbjct: 513  VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572

Query: 344  DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
            D +   S  S  A +      + +H      G + +D+ +GNA+V +YA+ G +  A   
Sbjct: 573  DNIGFASAISACAGIQALNQGQQIHAQACVSG-YSDDLSVGNALVSLYARCGKVRDAYFA 631

Query: 404  FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
            F+ +  KD ISWN+LI+G+AQ+G   EA+ +F  M +  +   N  T+   + A ++V  
Sbjct: 632  FDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ-EINSFTFGPAVSAAANVAN 690

Query: 464  LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
            ++ G +IHA +IK     +  V+  L+ +Y KCG IDDA   F+++P  + + WNA+++ 
Sbjct: 691  VKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTG 750

Query: 524  HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
            +  HG G KAL+ F  M   GV P+H+TFV +L+ACSH GLV EG +YF  M+E  G+ P
Sbjct: 751  YSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVP 810

Query: 584  HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              +HY C+VDL GR+G L  A  F++ MP++PDA +   LL AC +H N+++G  A+  L
Sbjct: 811  KPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHL 870

Query: 644  FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
             E++ ++   YVL+SN+YA  GKW   D  R + +DRG+KK PG S IEVNN V  F+ G
Sbjct: 871  LELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAG 930

Query: 704  NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
            ++ HP  +KIY+ LR+L       GY+P  + +L D E  +K      HSE+LAIAFG++
Sbjct: 931  DQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLL 990

Query: 764  SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S    +PI +FKNLRVCGDCHNW K++S+I++R I+VRDS RFHHFK GICSC DYW
Sbjct: 991  SLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 170/574 (29%), Positives = 291/574 (50%), Gaps = 9/574 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH  ++  G    V    +L++ Y   GDL  +   FD +  R +  WN ++  +V  G
Sbjct: 89  KLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFV-AG 147

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFV 180
           +++  V   ++  L   ++PD  T+  VL+ C          +KIH   +  G+E  +FV
Sbjct: 148 KMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFV 207

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              L+ +Y + G  N A+K+FD +  RDS SW AM+SG  QSG   EA+ +  +M   GV
Sbjct: 208 CNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGV 267

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
              P   +S+L  C + +    G  +H  ++K G     +V N L+ +Y++ G    A +
Sbjct: 268 YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+ M++RD VS+NS+I+   Q      A   F  M    ++PD +T+ SL S  + +  
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               +  H + ++ G    D+I+  A++D+Y K   I +A   F     ++V+ WN ++ 
Sbjct: 388 LLVGKQFHSYAIKAG-MSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            Y      +E+ ++F  M +   I PNQ TY SIL   S + A+  G +IH +V+K    
Sbjct: 447 AYGLLDNLNESFKIFTQM-QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQ 505

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
           F+V+V++ L+DMY K G++D A+ +F ++     V W A+I+ +  H +  +ALN F++M
Sbjct: 506 FNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM 565

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            D+G+  D+I F S ++AC+    +++GQ+  H      G    L     +V L+ R G 
Sbjct: 566 QDQGIHSDNIGFASAISACAGIQALNQGQQ-IHAQACVSGYSDDLSVGNALVSLYARCGK 624

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           +  A+ F  +     D   W +L+      G+ E
Sbjct: 625 VRDAY-FAFDKIFSKDNISWNSLISGFAQSGHCE 657



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 299/576 (51%), Gaps = 8/576 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            H V+++HA  +  G   ++F    L++ Y   G L+ ++  FD +  R+  +W +M+S 
Sbjct: 186 FHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSG 245

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEW 176
             + G   EAV  F Q   TSG+ P  Y F  VL AC  +     G+++H  VLK GF  
Sbjct: 246 LSQSGCEEEAVLLFCQMH-TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSL 304

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           + +V  +L+ +Y R G    A ++F+ M  RD  S+N++ISG  Q G + +AL++  +M 
Sbjct: 305 ETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMC 364

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           L+ +  D +TVAS+L  C+    +L G   H Y +K G+  ++ +   L+++Y K   ++
Sbjct: 365 LDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIK 424

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A   F      +VV WN ++ AY   ++   +   FT MQ  GI+P+  T  S+    +
Sbjct: 425 TAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCS 484

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L        +H  +++ G F  +V + + ++DMYAKLG ++ A  +F  L  KDV+SW 
Sbjct: 485 SLRAVDLGEQIHTQVLKTG-FQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT 543

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +I GYAQ+   +EA+ +F+ M++   I+ +   + S + A + + AL QG +IHA+   
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQD-QGIHSDNIGFASAISACAGIQALNQGQQIHAQACV 602

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
           +    D+ V   LV +Y +CG++ DA   F ++    ++ WN++IS     G  ++AL+ 
Sbjct: 603 SGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSL 662

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F QM   G   +  TF   ++A ++   V  G++  H M  + G     +    ++ L+ 
Sbjct: 663 FSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQ-IHAMIIKTGHDSETEVSNVLITLYA 721

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           + G++  A      MP + + S W A+L     HG+
Sbjct: 722 KCGNIDDAERQFFEMPEKNEIS-WNAMLTGYSQHGH 756



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 249/503 (49%), Gaps = 10/503 (1%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
           F       G+R +  T+  +L  C +     DG K+H  +LK+GF  +V +   L+ +Y 
Sbjct: 55  FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
            FG  + A  +FD+MPVR    WN ++  +     A   L +   M  E V  D  T A 
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174

Query: 250 ILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           +L  C   D     +  IH   + HG E +LFV N LI++Y K G +  A +VFD + +R
Sbjct: 175 VLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           D VSW ++++   QS     A   F  M  +G+ P      S+ S   ++   +    +H
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLH 294

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
           G ++++G+ +E  +  NA+V +Y++LG    A  VF  +  +D +S+N+LI+G +Q G +
Sbjct: 295 GLVLKQGFSLETYVC-NALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYS 353

Query: 429 SEAIEVFQMM-EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
            +A+E+F+ M  +C  + P+  T  S+L A S VGAL  G + H+  IK  +  D+ +  
Sbjct: 354 DKALELFKKMCLDC--LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEG 411

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+D+Y KC  I  A   F      + V WN ++  +G+    +++   F QM  EG+ P
Sbjct: 412 ALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           +  T+ S+L  CS    V  G++  H    + G + ++     ++D++ + G L  A   
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKI 530

Query: 608 IQNMPVRPDASIWGALLGACRIH 630
            + +  + D   W A++     H
Sbjct: 531 FRRLKEK-DVVSWTAMIAGYAQH 552



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 194/428 (45%), Gaps = 17/428 (3%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
            A+   Y         ++ L  M   GV  +  T   +L  C  S     G  +H  I+K
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G    + +   L+++Y  FG +  A+ VFD+M  R +  WN ++  +          G 
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS-------RSVHGFIMRRGWFMEDVIIGN 385
           F  M Q  ++PD  T   +      L  C            +H   +  G +   + + N
Sbjct: 157 FRRMLQEKVKPDERTYAGV------LRGCGGGDVPFHCVEKIHARTITHG-YENSLFVCN 209

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            ++D+Y K G +NSA  VF+GL  +D +SW  +++G +Q+G   EA+ +F  M     + 
Sbjct: 210 PLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSG-VY 268

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P    + S+L A + V   + G ++H  V+K     + +V   LV +Y + G    A  +
Sbjct: 269 PTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQV 328

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  + +   V +N++IS     G  DKAL  F++M  + ++PD +T  SLL+ACS  G +
Sbjct: 329 FNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGAL 388

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
             G++ FH    + G+   +   G ++DL+ +   +  AH F  +     +  +W  +L 
Sbjct: 389 LVGKQ-FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLV 446

Query: 626 ACRIHGNM 633
           A  +  N+
Sbjct: 447 AYGLLDNL 454



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 3/220 (1%)

Query: 416 NTLIT-GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           NT ++  Y+ +   +  I    +MEE   +  N  TY+ +L      G    G K+H ++
Sbjct: 36  NTALSYAYSNDEGEANGINFLHLMEE-RGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKI 94

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           +K   C +V +   L+D+Y   G +D A+++F ++P      WN ++          + L
Sbjct: 95  LKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVL 154

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             FR+ML E V+PD  T+  +L  C    +        H      G +  L     ++DL
Sbjct: 155 GLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDL 214

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           + + G L  A      +  R D+  W A+L      G  E
Sbjct: 215 YFKNGFLNSAKKVFDGLQKR-DSVSWVAMLSGLSQSGCEE 253


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/707 (40%), Positives = 434/707 (61%), Gaps = 6/707 (0%)

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
           +S+  + GRL EA+       L  G R     F  +L+ C   R+L  G+++H ++LK G
Sbjct: 68  VSILCKQGRLKEALGILNTMIL-QGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSG 126

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            + + ++  +LL MY + G    AR++FD +  R+  SW AMI  +      +EA    +
Sbjct: 127 IQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYE 186

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M+L G   D +T  S+L      + +  G  +H+ I K GLE    V  +L+ MYAK G
Sbjct: 187 TMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCG 246

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  A  +FD++ E++VV+W  +IA Y Q      A      MQQA + P+ +T  S+  
Sbjct: 247 DISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQ 306

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
                    + + VH +I++ G+  E + + NA++ MY K G +  A  +F  LP +DV+
Sbjct: 307 GCTTPLALEHGKKVHRYIIQSGYGRE-IWVVNALITMYCKCGGLKEARKLFGDLPHRDVV 365

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +W  ++TGYAQ G   EAI++F+ M++   I P++ T+ S L + S    L++G  IH +
Sbjct: 366 TWTAMVTGYAQLGFHDEAIDLFRRMQQ-QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQ 424

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           ++      DV++ + LV MY KCG +DDA  +F Q+   + V W A+I+    HG+  +A
Sbjct: 425 LVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREA 484

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L +F QM  +G++PD +TF S+L+AC+H GLV EG+++F  M  ++GIKP ++HY C VD
Sbjct: 485 LEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVD 544

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L GRAGHL  A N I  MP +P  S+WGALL ACRIH ++E G  A++ + ++D ++ G 
Sbjct: 545 LLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGA 604

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YV +SNIYA  G++E  ++VR +   R + K PG S IEV+ KV +F+  +++HP+ ++I
Sbjct: 605 YVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEI 664

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
           Y EL  LT ++K  GYVPD  FVL DV+E++K   L SHSERLAI +G++ +PP +PI+I
Sbjct: 665 YAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRI 724

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KNLRVCGDCH  +KFIS++  REII RD++RFHHF DG+CSCGD+W
Sbjct: 725 VKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 165/543 (30%), Positives = 284/543 (52%), Gaps = 16/543 (2%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L Q C +L  +   + +HA ++ SG     +    L++ YA  G L+ +R  FD I 
Sbjct: 99  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            RN+ +W +MI  +V   +  EA  C+    L +G +PD  TF  +L A  N   L  G+
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL-AGCKPDKVTFVSLLNAFTNPELLQVGQ 217

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           K+H  + K G E +  V  SL+ MY + G  + A+ +FD +P ++  +W  +I+GY Q G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               AL++L++M+   V+ + IT  SIL  C     +  G  +H YI++ G    ++V N
Sbjct: 278 QVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVN 337

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI MY K G ++ A ++F  +  RDVV+W +++  Y Q      A   F  MQQ GI+P
Sbjct: 338 ALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKP 397

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T  S  +  +     +  +S+H  ++  G+ + DV + +A+V MYAK G ++ A  V
Sbjct: 398 DKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL-DVYLQSALVSMYAKCGSMDDARLV 456

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +  ++V++W  +ITG AQ+G   EA+E F+ M++   I P++ T+ S+L A +HVG 
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK-QGIKPDKVTFTSVLSACTHVGL 515

Query: 464 LRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
           + +G K H R +         V   +C VD+ G+ G +++A ++   +P +     W A+
Sbjct: 516 VEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +S   IH   ++       +L   + PD    +V+L    + +G   + ++   +M++  
Sbjct: 575 LSACRIHSDVERGERAAENVLK--LDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRD 632

Query: 580 GIK 582
            +K
Sbjct: 633 VVK 635



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 7/215 (3%)

Query: 47  EIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I +  + Q CT    L H K++H  ++ SG  + ++    L+  Y   G L  +R  F 
Sbjct: 298 KITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFG 357

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            + +R+V TW +M++ Y + G   EA+D F +     G++PD  TF   L +C +   L 
Sbjct: 358 DLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQ-QQGIKPDKMTFTSALTSCSSPAFLQ 416

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           +GK IH  ++  G+  DV++ ++L+ MY + G  + AR +F+ M  R+  +W AMI+G  
Sbjct: 417 EGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCA 476

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           Q G   EAL+  ++M+ +G+  D +T  S+L  C 
Sbjct: 477 QHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACT 511


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 303/741 (40%), Positives = 441/741 (59%), Gaps = 5/741 (0%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           +KL   Y N GDL  +   FD +       WN +++   + G  S ++  F +  ++SG+
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGV 191

Query: 143 RPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
             D YTF  V K+    R++  G+++H  +LK GF     V  SL+  Y +    + ARK
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 251

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +FD+M  RD  SWN++I+GY  +G A + L +  +M + G+ +D  T+ S+   CA S  
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           I  G  +H   VK          N L++MY+K G +  A  VF +M +R VVS+ S+IA 
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           Y +      A   F  M++ GI PD+ T+ ++ +  A+       + VH +I        
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF- 430

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D+ + NA++DMYAK G +  A  VF  + VKD+ISWNT+I GY++N  A+EA+ +F ++ 
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           E    +P++ T   +LPA + + A  +G +IH  +++N    D  VA  LVDMY KCG +
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             A  LF  +     V W  +I+ +G+HG G +A+  F QM   G+  D I+FVSLL AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGLV EG R+F++M+ E  I+P ++HY C+VD+  R G L  A+ FI+NMP+ PDA+I
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WGALL  CRIH +++L    ++++FE++ EN GYYVLM+NIYA   KWE V  +R     
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGL+K PG S IE+  +V+IF  G+ ++P+ E I   LR + A+M   GY P   + L D
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALID 790

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
            EE EKE  L  HSE+LA+A GIISS     I++ KNLRVCGDCH   KF+S++T REI+
Sbjct: 791 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 850

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           +RDSNRFH FKDG CSC  +W
Sbjct: 851 LRDSNRFHQFKDGHCSCRGFW 871



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 282/553 (50%), Gaps = 19/553 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F S   +H  ++LH  ++ SG  +       LV FY     +  +R  FD ++ R+V +W
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           NS+I+ YV  G   + +  F Q  L SG+  D  T   V   C   R +  G+ +H   +
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K  F  +     +LL MY + G  + A+ +F +M  R   S+ +MI+GY + G A EA+ 
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + +EM  EG+S D  TV ++L  CAR   +  G  +H +I ++ L F++FVSN L++MYA
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAGIQPDLLTLV 349
           K G M+ A  VF +M  +D++SWN+II  Y ++     A   F   +++    PD  T+ 
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            +    A L+     R +HG+IMR G+F  D  + N++VDMYAK G +  A  +F+ +  
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD++SW  +I GY  +G   EAI +F  M +   I  ++ ++VS+L A SH G + +G +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWR 621

Query: 470 IHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
               +   C +   V    C+VDM  + G +  A      +P    +  W A++    IH
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM--MQEEFGIKPHL 585
                A     ++ +  + P++  +  L+     + + +E +++  +  +++  G +   
Sbjct: 682 HDVKLAEKVAEKVFE--LEPENTGYYVLM-----ANIYAEAEKWEQVKRLRKRIGQRGLR 734

Query: 586 KHYGCM-VDLFGR 597
           K+ GC  +++ GR
Sbjct: 735 KNPGCSWIEIKGR 747



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 273/536 (50%), Gaps = 17/536 (3%)

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---R 157
           TFD    R+V   N+ +  +   G L  AV       ++     D  T   VL+ C   +
Sbjct: 56  TFD----RSVTDANTQLRRFCESGNLENAVKLL---CVSGKWDIDPRTLCSVLQLCADSK 108

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L DGK++   +   GF  D  + + L  MY   G    A ++FD++ +  +  WN +++
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
              +SG+   ++ +  +M   GV MD  T + +    +   ++  G  +H +I+K G   
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGE 228

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
              V N+L+  Y K   +  A +VFD+M ERDV+SWNSII  Y  +         F  M 
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            +GI+ DL T+VS+ +  A        R+VH   ++  +  ED    N ++DMY+K G +
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDL 347

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           +SA AVF  +  + V+S+ ++I GYA+ GLA EA+++F+ MEE   I+P+  T  ++L  
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNC 406

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +    L +G ++H  + +N L FD+FV+  L+DMY KCG + +A  +F ++     + W
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQR-YFHMM 575
           N II  +  +   ++AL+ F  +L+E    PD  T   +L AC+      +G+  + ++M
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +  +    H+ +   +VD++ + G L +AH    ++  + D   W  ++    +HG
Sbjct: 527 RNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/777 (38%), Positives = 448/777 (57%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +CTK+   K   +LH  +V  G     F    LV  Y+  G+L  +   F  + 
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGK 163
            R+  ++NS+IS   + G    A+  F +  L   ++PD  T   +L AC ++     GK
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC-MKPDCVTVASLLSACASVGAGYKGK 334

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+K+G   D+ +  SLL +Y +      A + F      +   WN M+  Y Q G
Sbjct: 335 QLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLG 394

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           N  E+  I  +M++EG+  +  T  SIL  C     +  G  IH  ++K G +FN++V +
Sbjct: 395 NLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS 454

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G +  A  +  ++ E DVVSW ++IA Y Q +    A   F  M+  GI+ 
Sbjct: 455 VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +   S  S  A +      + +H      G + ED+ IGNA+V +YA+ G    A   
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYISG-YSEDLSIGNALVSLYARCGRAQDAYLA 573

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  KD ISWN LI+G+AQ+G   EA++VF  M +   +  N  T+ S + A ++   
Sbjct: 574 FEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAG-VEANLFTFGSAVSATANTAN 632

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHA +IK     +   +  L+ +Y KCG I+DA   F+++P  + V WNA+I+ 
Sbjct: 633 IKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITG 692

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  HG G +A++ F +M   G+ P+H+TFV +L+ACSH GLV+EG  YF  M +E G+ P
Sbjct: 693 YSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVP 752

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
             +HY C+VDL GRA  L  A  FI+ MP+ PDA IW  LL AC +H N+E+G  A+  L
Sbjct: 753 KPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHL 812

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++ E+   YVL+SN+YA  GKW+  D  R + +DRG+KK PG S IEV N +  F+ G
Sbjct: 813 LELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVG 872

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  E+IY+ + +L  +   +GYV D+  +L DVE+++K+     HSE+LA+AFG++
Sbjct: 873 DRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLL 932

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S     PI++ KNLRVC DCHNW KF+S+I+ R I+VRD+ RFHHF+ G+CSC DYW
Sbjct: 933 SLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 178/589 (30%), Positives = 299/589 (50%), Gaps = 12/589 (2%)

Query: 53  LFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           LF+ C     L   K+LHA +  SG        ++L++ Y   G++  +   FD I   N
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKI 165
           V  WN +IS  +   +L+  V   +   +T  + PD  TF  VL+AC          ++I
Sbjct: 76  VSFWNKVISGLL-AKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQI 134

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++  GF     V   L+ +Y + G  ++A+ +F+ + ++DS SW AMISG  Q+G  
Sbjct: 135 HAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGRE 194

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA+ +  +M    V   P   +S+L  C + +    G  +H +IVK GL    FV N L
Sbjct: 195 DEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNAL 254

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + +Y+++G +  A ++F +M  RD +S+NS+I+   Q      A   F  MQ   ++PD 
Sbjct: 255 VTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T+ SL S  A +      + +H ++++ G    D+II  +++D+Y K   I +A   F 
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMG-MSSDLIIEGSLLDLYVKCFDIETAHEYFL 373

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
               ++V+ WN ++  Y Q G  SE+  +F  M +   + PNQ TY SIL   + +GAL 
Sbjct: 374 TTETENVVLWNVMLVAYGQLGNLSESYWIFLQM-QIEGLMPNQYTYPSILRTCTSLGALD 432

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G +IH +VIK+   F+V+V + L+DMY K G +D A  +  ++     V W A+I+ + 
Sbjct: 433 LGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYT 492

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            H    +AL  F++M ++G+R D+I F S ++AC+    +++GQ+  H      G    L
Sbjct: 493 QHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ-IHAQSYISGYSEDL 551

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
                +V L+ R G    A+   + +  + + S W AL+      G+ E
Sbjct: 552 SIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALISGFAQSGHCE 599



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 5/400 (1%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M   G+  +  T   +   C  S ++L    +H  I K G +    + + LI++Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTS 353
           + +A+++FD +   +V  WN +I+            G F+ M    + PD  T  S L +
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
                   + +  +H  I+  G F    ++ N ++D+Y+K G ++ A  VFE L +KD +
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW  +I+G +QNG   EAI +F  M +   I P    + S+L A + +   + G ++H  
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVI-PTPYVFSSVLSACTKIELFKLGEQLHGF 238

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           ++K  L  + FV   LV +Y + G +  A  +F ++ R   + +N++IS     G  D+A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L  F +M  + ++PD +T  SLL+AC+  G   +G++  H    + G+   L   G ++D
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ-LHSYVIKMGMSSDLIIEGSLLD 357

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
           L+ +   +  AH +        +  +W  +L A    GN+
Sbjct: 358 LYVKCFDIETAHEYFLTTETE-NVVLWNVMLVAYGQLGNL 396


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 316/789 (40%), Positives = 466/789 (59%), Gaps = 16/789 (2%)

Query: 43   NESREID---FDDLFQSCTK---LHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGDL 95
            ++  E+D   +  + Q C +   L   K +H+++  +G  I+ V  + KLV  Y + G L
Sbjct: 444  SQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGA-KLVFMYVSCGAL 502

Query: 96   SFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
               R  FDHI S   V+ WN M+S Y + G   E++  F +     G+  + YTF  +LK
Sbjct: 503  REGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQ-KLGITGNSYTFSCILK 561

Query: 155  ACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
                L    + K+IH  V KLGF     V  SL+  Y + G  + A KLFD++  RD  S
Sbjct: 562  CFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVS 621

Query: 212  WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
            WN+MISG   +G +  AL+   +M +  V +D  T+ + +  CA   ++  G  +H   V
Sbjct: 622  WNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGV 681

Query: 272  KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
            K      +  +N L++MY+K G +  A++ F++M ++ VVSW S+IAAY +      A  
Sbjct: 682  KACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIR 741

Query: 332  FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
             F  M+  G+ PD+ ++ S+    A  N     R VH +I R+      + + NA++DMY
Sbjct: 742  LFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI-RKNNMALCLPVSNALMDMY 800

Query: 392  AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            AK G +  A  VF  +PVKD++SWNT+I GY++N L +EA+++F  M++  E  P+  T 
Sbjct: 801  AKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK--ESRPDGITM 858

Query: 452  VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
              +LPA   + AL  G  IH  +++N    ++ VA  L+DMY KCG +  A  LF  +P 
Sbjct: 859  ACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPE 918

Query: 512  SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
               + W  +IS  G+HG G++A+  F++M   G++PD ITF S+L ACSHSGL++EG  +
Sbjct: 919  KDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGF 978

Query: 572  FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            F+ M  E  ++P L+HY CMVDL  R G+L  A+N I+ MP++PDA+IWGALL  CRIH 
Sbjct: 979  FNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHH 1038

Query: 632  NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
            ++EL    ++ +FE++ +N GYYVL++NIYA   KWE V ++R     RGLKK+PG S I
Sbjct: 1039 DVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWI 1098

Query: 692  EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
            EV  K   F + +  HP+ + I+  L NL  KMK+ G+ P   + L +  + EKE  L  
Sbjct: 1099 EVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCG 1158

Query: 752  HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
            HSE+LA+AFGI++ P    I++ KNLRVC DCH   KF+S+ T REII+RDSNRFHHFKD
Sbjct: 1159 HSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKD 1218

Query: 812  GICSCGDYW 820
            G CSC D+W
Sbjct: 1219 GFCSCRDFW 1227


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/795 (37%), Positives = 462/795 (58%), Gaps = 53/795 (6%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           +C  L  V+++HA   V G ++ +  + KL+ FY+    L  +   FD +  R+  +W+ 
Sbjct: 90  NCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSV 149

Query: 116 MISVYVRCGRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           M+  + + G   + ++CF  F   +  G RPD YT P V++ACR+L +            
Sbjct: 150 MVGGFAKVG---DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN------------ 194

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
                 +  +L+ MY +      AR LFD M  RD  +W  MI GY + G A E+L + +
Sbjct: 195 ------LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           +MR EGV  D + + +++  CA+   +    +I  YI +   + ++ +   +I+MYAK G
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  A  +FD+M E++V+SW+++IAAY        A   F  M  +G+ PD +TL SL  
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
                 +    R VH      G  ++++I+ N +V  Y+    ++ A  +F+G+ V+D +
Sbjct: 369 ACINCRNLTQVRQVHAQASVHG-MLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSV 427

Query: 414 SWNTLITGYAQ----------------------------NGLASEAIEVFQMMEECNEIN 445
           SW+ ++ G+A+                             G A+E++ +F  M E   + 
Sbjct: 428 SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMRE-EGVV 486

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P++   V+++ A + +GA+ +   I   + +     DV + T ++DM+ KCG ++ A  +
Sbjct: 487 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 546

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++   + + W+A+I+ +G HGQG KAL+ F  ML  G+ P+ IT VSLL ACSH+GLV
Sbjct: 547 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 606

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG R+F +M E++ ++  +KHY C+VDL GRAG L  A   I++M V  D  +WGA LG
Sbjct: 607 EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLG 666

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           ACR H ++ L   A+  L E+  +N G+Y+L+SNIYAN G+WE V + R L   R LKK 
Sbjct: 667 ACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKI 726

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PGW+ IEV+NK   F  G+ THP+ ++IY+ L++L  K++ +GYVPD +FVL DV+E+ K
Sbjct: 727 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 786

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
             IL SHSE+LAIAFG+I++P  +PI+I KNLRVCGDCH + K +S IT R IIVRD+NR
Sbjct: 787 IGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 846

Query: 806 FHHFKDGICSCGDYW 820
           FHHFK+G CSCGDYW
Sbjct: 847 FHHFKEGACSCGDYW 861


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 298/777 (38%), Positives = 443/777 (57%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  +CTK       + +HA +   G          L+  Y   G LS +   F  + 
Sbjct: 146 LSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMP 205

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           Y +  T+N++IS + +CG    A++ F +  L SG  PD  T   +L AC ++ D   GK
Sbjct: 206 YCDRVTFNTLISRHAQCGNGESALEIFEEMRL-SGWTPDCVTIASLLAACASIGDLNKGK 264

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  +LK G   D  +  SLL +Y + G+   A ++F      +   WN M+  Y Q  
Sbjct: 265 QLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQIS 324

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ D+  +M   GV  +  T   +L  C  +  I  G  IHL  +K G E +++VS 
Sbjct: 325 DLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSG 384

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+G +  A R+ + +  +DVVSW S+IA Y Q      A   F  MQ  GI P
Sbjct: 385 VLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWP 444

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +   R  + +H  +   G +  DV I NA+V++YA+ G    A ++
Sbjct: 445 DNIGLASAISACAGIKAMRQGQQIHSRVYVSG-YSADVSIWNALVNLYARCGRSKEAFSL 503

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  KD I+WN +++G+AQ+GL  EA+EVF  M +   +  N  T+VS + A +++  
Sbjct: 504 FEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG-VKYNVFTFVSSISASANLAD 562

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHA VIK     +  VA  L+ +YGKCG I+DA   F+++   + V WN II+ 
Sbjct: 563 IKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITS 622

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG G +AL+ F QM  EG++P+ +TF+ +L ACSH GLV EG  YF  M  E GI P
Sbjct: 623 CSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHP 682

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C+VD+ GRAG L  A  F++ MPV  +A +W  LL ACR+H N+E+G +A+  L
Sbjct: 683 RPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYL 742

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA  GKW   D VR + +DRG++K PG S IEV N V  F+ G
Sbjct: 743 LELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVG 802

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP   +IY  L +L  ++  +GY+    F+  + E+++K+     HSE+LA+AFG++
Sbjct: 803 DRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLM 862

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S PP  P+++ KNLRVC DCH W KF S++  REI++RD  RFHHF +G CSCGD+W
Sbjct: 863 SLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 293/572 (51%), Gaps = 8/572 (1%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V  +HA  +  G  +   +   L++ YA  G +  +R  F+ +S R+  +W +M+S Y R
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVF 179
            G   EAV  ++Q    SG+ P  Y    VL AC        G+ +H  V K G   +  
Sbjct: 121 NGLGEEAVGLYHQMH-CSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +L+ +Y RFG  ++A ++F +MP  D  ++N +IS + Q GN   AL+I +EMRL G
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
            + D +T+AS+L  CA   ++  G  +H Y++K G+  +  +  +L+++Y K G++  AL
Sbjct: 240 WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEAL 299

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            +F      +VV WN ++ AY Q +D   +   F  M  AG++P+  T   L        
Sbjct: 300 EIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG 359

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           +      +H   ++ G F  D+ +   ++DMY+K G ++ A  + E L  KDV+SW ++I
Sbjct: 360 EINLGEQIHLLSIKTG-FESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMI 418

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY Q+    EA+E F+ M+    I P+     S + A + + A+RQG +IH+RV  +  
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFG-IWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGY 477

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV +   LV++Y +CGR  +A SLF  +     + WN ++S     G  ++AL  F +
Sbjct: 478 SADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIK 537

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M   GV+ +  TFVS ++A ++   + +G++  H    + G     +    ++ L+G+ G
Sbjct: 538 MYQAGVKYNVFTFVSSISASANLADIKQGKQ-IHATVIKTGCTSETEVANALISLYGKCG 596

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +  A      M  R   S W  ++ +C  HG
Sbjct: 597 SIEDAKMQFFEMSERNHVS-WNTIITSCSQHG 627



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 235/480 (48%), Gaps = 8/480 (1%)

Query: 149 FPPVLKACRNLVDG----KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           F   L+ CR  V        IH   +  G   D      L+ +Y + GL   AR++F+ +
Sbjct: 44  FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD+ SW AM+SGY ++G   EA+ +  +M   GV   P  ++S+L  C ++     G 
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           L+H  + K G      V N LI +Y +FG +  A RVF +M   D V++N++I+ + Q  
Sbjct: 164 LVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCG 223

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +  +A   F  M+ +G  PD +T+ SL +  A + D    + +H ++++ G    D II 
Sbjct: 224 NGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAG-MSPDYIIE 282

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            +++D+Y K G+I  A  +F+     +V+ WN ++  Y Q    +++ ++F  M     +
Sbjct: 283 GSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAG-V 341

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN+ TY  +L   ++ G +  G +IH   IK     D++V+  L+DMY K G +D A  
Sbjct: 342 RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARR 401

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +   +     V W ++I+ +  H    +AL  F+ M   G+ PD+I   S ++AC+    
Sbjct: 402 ILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKA 461

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           + +GQ+  H      G    +  +  +V+L+ R G    A +  + +    D   W  ++
Sbjct: 462 MRQGQQ-IHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-HKDKITWNGMV 519


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 297/760 (39%), Positives = 445/760 (58%), Gaps = 7/760 (0%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H +++  G +  VF    L+  Y   G +  +   F ++  RN+ +WNS+IS +   G 
Sbjct: 53  IHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGF 112

Query: 126 LSEAVDCFYQFTL-TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
             +  D   +      GL PD  T   VL  C   VD   G +IH   +KLG   DV V 
Sbjct: 113 SKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVN 172

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-EGV 240
            SL+ MY + G    A+ LFD    +++ SWN MI G C  G   EA ++  EM++ E +
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDI 232

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            ++ +TV +ILP C     + S   +H Y ++HG +++  V+N  +  YAK GM+  A R
Sbjct: 233 EVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAER 292

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M  + V SWN++I    Q+ DP  A   +  M  +G+ PD  T+ SL    A L  
Sbjct: 293 VFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKS 352

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R  + VHGF++R G  + D  IG +++ +Y   G  +SA  +F+G+  K  +SWN +I+
Sbjct: 353 LRYGKEVHGFVLRHGLEI-DSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY+QNGL  +A+ +F+ +   +   P+    VS+L A S   ALR G + H   +K  L 
Sbjct: 412 GYSQNGLPEDALILFRKLVS-DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLM 470

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            DVFVA   +DMY K G I ++ S+F  +       WNAII+ +G+HG G++++  F +M
Sbjct: 471 EDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERM 530

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              G  PD  TF+ +LT CSH+GLV EG +YF+ MQ   GI+P L+HY C++D+ GRAG 
Sbjct: 531 RKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGR 590

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   +  MP +PD+ +W +LL  CR  G +E+G + +++L E++ +NV  YV +SN+
Sbjct: 591 LDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNL 650

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA  G+W+ V  VR + +D GL+K  G S IE+  KV  F  G+   P+ +++    R L
Sbjct: 651 YAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKL 710

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             KM  +GY P+ S VL DV+E++K   L  HSE+LAI FG++++   + ++IFKNLR+C
Sbjct: 711 EKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRIC 770

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCHN +KF+S++T REII+RD+ RFHHFKDG+CSCGDYW
Sbjct: 771 VDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 176/529 (33%), Positives = 288/529 (54%), Gaps = 22/529 (4%)

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAAS 183
           S+A+D F +    +    D +TFP V+KAC   +D   G+ IH  V+K+G   DVFV  +
Sbjct: 12  SDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA 71

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL--EGVS 241
           L+ MY +FG  + A K+F  MPVR+  SWN++ISG+ ++G + +  D+L EM    EG+ 
Sbjct: 72  LIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLL 131

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D  T+ ++LPVCAR  ++  G+ IH   VK GL  ++ V+N+L++MY+K G +  A  +
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLND 360
           FD+   ++ VSWN++I           A   F  MQ Q  I+ + +T++++     +++ 
Sbjct: 192 FDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQ 251

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R+ + +HG+ +R G F  D ++ N  V  YAK G++  A  VF  +  K V SWN LI 
Sbjct: 252 LRSLKELHGYSIRHG-FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIG 310

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G AQNG   +A+ ++  M     + P+  T  S+L A +H+ +LR G ++H  V+++ L 
Sbjct: 311 GCAQNGDPRKALNLYIQMTYSGLV-PDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D F+   L+ +Y  CG    A  LF  +   SSV WNA+IS +  +G  + AL  FR++
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKL 429

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH---YGC-MVDLFG 596
           + +G +P  I  VS+L ACS    +  G+         + +K  L       C  +D++ 
Sbjct: 430 VSDGFQPSDIAVVSVLGACSQQSALRLGKE-----THCYALKALLMEDVFVACSTIDMYA 484

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           ++G +  + +    +  +  AS W A++ A  +HG+ E     S  LFE
Sbjct: 485 KSGCIKESRSVFDGLKNKDLAS-WNAIIAAYGVHGDGE----ESIELFE 528



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 168/609 (27%), Positives = 306/609 (50%), Gaps = 35/609 (5%)

Query: 16  LLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGK 75
           L+ ++     L    A  + + P C    +RE+D          +    R+H L V  G 
Sbjct: 120 LVEMMAGEEGLLPDIATLVTVLPVC----AREVD----------VQMGIRIHGLAVKLGL 165

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
            + V  +  LV+ Y+  G L+ ++  FD  + +N  +WN+MI      G + EA + F +
Sbjct: 166 SEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFRE 225

Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             +   +  +  T   +L AC     L   K++H   ++ GF++D  VA   +  Y + G
Sbjct: 226 MQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCG 285

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           +   A ++F  M  +   SWNA+I G  Q+G+  +AL++  +M   G+  D  T+ S+L 
Sbjct: 286 MLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLL 345

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
             A   ++  G  +H ++++HGLE + F+  +L+++Y   G    A  +FD M E+  VS
Sbjct: 346 ASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVS 405

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++I+ Y Q+  P  A   F  +   G QP  + +VS+    +Q +  R  +  H + +
Sbjct: 406 WNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYAL 465

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
            +   MEDV +  + +DMYAK G I  + +VF+GL  KD+ SWN +I  Y  +G   E+I
Sbjct: 466 -KALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESI 524

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLV 490
           E+F+ M +  ++ P+  T++ IL   SH G + +G+K +   ++N    +  +    C++
Sbjct: 525 ELFERMRKVGQM-PDGFTFIGILTVCSHAGLVEEGLK-YFNEMQNFHGIEPKLEHYACVM 582

Query: 491 DMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           DM G+ GR+DDA+ L +++P +  S  W++++S     G+ +       ++L+  + P +
Sbjct: 583 DMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLE--LEPKN 640

Query: 550 I-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
           +  +VSL    + SG   + +R   M++ + G++   K  GC     G     G  H+F+
Sbjct: 641 VENYVSLSNLYAGSGRWDDVRRVRQMIK-DIGLQ---KDAGCSWIELG-----GKVHSFV 691

Query: 609 QNMPVRPDA 617
               + P +
Sbjct: 692 AGDNLLPQS 700


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 302/772 (39%), Positives = 464/772 (60%), Gaps = 8/772 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L +S   L  VK  HA ++ +      F +TKLV  Y++L  L  +R+ FD         
Sbjct: 38  LRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLL 97

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
            N+M+  Y++ GR  E ++ F     +  L  D  +    LKAC + +D   G +I  S 
Sbjct: 98  CNAMLCGYLQSGRYRETLELF-GLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSA 156

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++ G E + FV +S++    +FG    A+++FD MP +D   WN++I GY Q+G    A 
Sbjct: 157 VEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAF 216

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            +  EM   G+   PIT+ S++  C    N+  G  +H Y++  GL  ++ V  + ++MY
Sbjct: 217 QLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMY 276

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  VF +M  R++VSWN++I+   ++     +   F  + ++    DL T+V
Sbjct: 277 SKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIV 336

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL    +Q       + +HG  +R   F  ++I+  A+VD+Y+K G +  A  VF  +  
Sbjct: 337 SLLQGCSQTASLATGKILHGCAIRS--FESNLILSTAIVDLYSKCGSLKQATFVFNRMKD 394

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           ++VI+W  ++ G AQNG A +A+ +F  M+E   I  N  T+VS++ + +H+G+L++G  
Sbjct: 395 RNVITWTAMLVGLAQNGHAEDALRLFAQMQE-EGIAANSVTFVSLVHSCAHLGSLKRGRS 453

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHG 528
           IH  + +    FD+   T LVDMY KCG+I+ A  +F     S  V  WN++I+ +G+HG
Sbjct: 454 IHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHG 513

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +A+  + +M++EG++P+  TF+SLL+ACSHS LV +G   F+ M+ +  I+P  KHY
Sbjct: 514 HGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHY 573

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            C+VDL  RAG    A   I+ MP +P  ++  ALL  CR H N+ LG   SD+L  +D+
Sbjct: 574 ACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDA 633

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            N G Y+++SNIYA   +W+ VD +R L R+RGLKKTPG+S +E  N V  F+ G+ +HP
Sbjct: 634 MNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHP 693

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
            +E+IY  L +L + +++ GYVPD S VL+DV+E+ K  +L  HSERLAIAFG++++P  
Sbjct: 694 NWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAG 753

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S I+I KNLRVCGDCH  TK+IS+I +REIIVRD+NRFHHF +G CSCGDYW
Sbjct: 754 SLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 291/780 (37%), Positives = 473/780 (60%), Gaps = 13/780 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI- 105
           F  + ++C  L   +    +H + V  G  + VF    L+  Y   GDL  +R  FD I 
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 106 -SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVD 161
               +  +WNS+IS +V  G   EA+  F +     G+  + YTF   L+   +   +  
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQ-EVGVASNTYTFVAALQGVEDPSFVKL 266

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G  IH +VLK     DV+VA +L+ MY + G    A ++F+ M  RD  SWN ++SG  Q
Sbjct: 267 GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQ 326

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    +AL+   +M+  G   D ++V +++    RS N+L G  +H Y +++GL+ N+ +
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N L++MYAK   +++    F+ M E+D++SW +IIA Y Q+   + A   F  +Q  G+
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
             D + + S+    + L      R +HG++ +R   + D+++ NA+V++Y ++G I+ A 
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD--LADIMLQNAIVNVYGEVGHIDYAR 504

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             FE +  KD++SW ++IT    NGL  EA+E+F  +++ N I P+    +S L A +++
Sbjct: 505 RAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN-IQPDSIAIISALSATANL 563

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +L++G +IH  +I+     +  +A+ LVDMY  CG ++++  +F+ V +   + W ++I
Sbjct: 564 SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMI 623

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +G+HG G+KA+  F++M D+ V PDHITF++LL ACSHSGL+ EG+R+F +M+  + +
Sbjct: 624 NANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQL 683

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P  +HY CMVDL  R+  L  A++F++NMP++P + IW ALLGAC IH N ELG +A+ 
Sbjct: 684 EPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAK 743

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L + D+EN G Y L+SNI+A  G+W  V+EVR   +  GLKK PG S IEV+NK+  F 
Sbjct: 744 ELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFM 803

Query: 702 TGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             +++HP+ + IY +L   T  + K  GY+    FV  +V E+EK  +L  HSERLA+ +
Sbjct: 804 ARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGY 863

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G++ +P  + I+I KNLR+C DCH + K  S++++R ++VRD+NRFHHF+ G+CSCGD+W
Sbjct: 864 GLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 182/587 (31%), Positives = 309/587 (52%), Gaps = 17/587 (2%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL  +   L   ++LHALL+ S    + F +TKLV  Y   G L  +   FD +S R ++
Sbjct: 54  DLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIF 111

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +WN+++  +V  G+  EA++  Y+     G+  D  TFP VLKAC  L +   G +IH  
Sbjct: 112 SWNALMGAFVSSGKYLEAIE-LYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD--MPVRDSGSWNAMISGYCQSGNAV 226
            +K G+   VFV  +L+ MY + G    AR LFD   M   D+ SWN++IS +   GN +
Sbjct: 171 AVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCL 230

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +   M+  GV+ +  T  + L        +  G+ IH  ++K     +++V+N LI
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALI 290

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MYAK G M  A RVF+ M+ RD VSWN++++   Q+     A  +F  MQ +G +PD +
Sbjct: 291 AMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQV 350

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           ++++L +   +  +    + VH + +R G    ++ IGN +VDMYAK   +      FE 
Sbjct: 351 SVLNLIAASGRSGNLLKGKEVHAYAIRNG-LDSNMQIGNTLVDMYAKCCCVKYMGHAFEC 409

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALR 465
           +  KD+ISW T+I GYAQN    EAI +F+ ++ +  +++P      S+L A S + +  
Sbjct: 410 MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMM--IGSVLRACSGLKSRN 467

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
              +IH  V K  L  D+ +   +V++YG+ G ID A   F  +     V W ++I+C  
Sbjct: 468 FIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCV 526

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPH 584
            +G   +AL  F  +    ++PD I  +S L+A ++   + +G+  +  ++++ F ++  
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP 586

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +     +VD++   G +  +     ++  R D  +W +++ A  +HG
Sbjct: 587 IA--SSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMINANGMHG 630



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 251/489 (51%), Gaps = 16/489 (3%)

Query: 155 ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
           A + L  G+++H  +LK       F+A  L+ MY + G    A K+FD+M  R   SWNA
Sbjct: 58  AAKALPQGQQLHALLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNA 115

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           ++  +  SG  +EA+++  +MR+ GV++D  T  S+L  C        G  IH   VK G
Sbjct: 116 LMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQ-MMER-DVVSWNSIIAAYEQSNDPITAHGF 332
               +FV N LI MY K G +  A  +FD  MME+ D VSWNSII+A+    + + A   
Sbjct: 176 YGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSL 235

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  MQ+ G+  +  T V+    V   +  +    +HG +++   F  DV + NA++ MYA
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHF-ADVYVANALIAMYA 294

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G +  A  VFE +  +D +SWNTL++G  QN L S+A+  F+ M+   +  P+Q + +
Sbjct: 295 KCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ-KPDQVSVL 353

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           +++ A    G L +G ++HA  I+N L  ++ +   LVDMY KC  +      F  +   
Sbjct: 354 NLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEK 413

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             + W  II+ +  +    +A+N FR++  +G+  D +   S+L AC  SGL S   R F
Sbjct: 414 DLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC--SGLKS---RNF 468

Query: 573 HMMQEEFGIKPHLKH---YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
                 +  K  L        +V+++G  GH+  A    +++  + D   W +++  C +
Sbjct: 469 IREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSK-DIVSWTSMITCC-V 526

Query: 630 HGNMELGAV 638
           H  + + A+
Sbjct: 527 HNGLPVEAL 535


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/794 (38%), Positives = 468/794 (58%), Gaps = 26/794 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  L ++   L  +   K++HA +   G  + +V  +  LVN Y   GD       FD I
Sbjct: 13  FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 72

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL------ 159
           S RN  +WNS+IS      +   A++ F +  L   + P  +T   V+ AC NL      
Sbjct: 73  SERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGL 131

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           + GK++H   L+ G E + F+  +L+ MY + G    ++ L      RD  +WN ++S  
Sbjct: 132 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 190

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFN 278
           CQ+   +EAL+ L EM LEGV  D  T++S+LP C+  + + +G  +H Y +K+G L+ N
Sbjct: 191 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 250

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FV + L++MY     +    RVFD M +R +  WN++IA Y Q+     A   F  M++
Sbjct: 251 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 310

Query: 339 -AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            AG+  +  T+  +     +        ++HGF+++RG    D  + N ++DMY++LG I
Sbjct: 311 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKI 369

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE----------INPN 447
           + A  +F  +  +D+++WNT+ITGY  +    +A+ +   M+              + PN
Sbjct: 370 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 429

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T ++ILP+ + + AL +G +IHA  IKN L  DV V + LVDMY KCG +  +  +F 
Sbjct: 430 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 489

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           Q+P+ + + WN II  +G+HG G +A++  R M+ +GV+P+ +TF+S+  ACSHSG+V E
Sbjct: 490 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 549

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGA 626
           G R F++M+ ++G++P   HY C+VDL GRAG +  A+  +  MP     A  W +LLGA
Sbjct: 550 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 609

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
            RIH N+E+G +A+  L +++     +YVL++NIY++ G W+   EVR   +++G++K P
Sbjct: 610 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 669

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S IE  ++V  F  G+ +HP+ EK+   L  L  +M+  GYVPD S VL +VEEDEKE
Sbjct: 670 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 729

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
            +L  HSE+LAIAFGI+++ P + I++ KNLRVC DCH  TKFIS+I +REII+RD  RF
Sbjct: 730 ILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRF 789

Query: 807 HHFKDGICSCGDYW 820
           H FK+G CSCGDYW
Sbjct: 790 HRFKNGTCSCGDYW 803



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 256/510 (50%), Gaps = 21/510 (4%)

Query: 141 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD-VFVAASLLHMYCRFGLANV 196
           G++PD Y FP +LKA  +L D   GK+IH  V K G+  D V VA +L+++Y + G    
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
             K+FD +  R+  SWN++IS  C       AL+    M  E V     T+ S++  C+ 
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 257 ---SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               + ++ G  +H Y ++ G E N F+ N L+ MY K G +  +  +      RD+V+W
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N+++++  Q+   + A  +   M   G++PD  T+ S+    + L   R  + +H + ++
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G   E+  +G+A+VDMY     + S   VF+G+  + +  WN +I GY+QN    EA+ 
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 303

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  MEE   +  N  T   ++PA    GA  +   IH  V+K  L  D FV   L+DMY
Sbjct: 304 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 363

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM------LDEG--- 544
            + G+ID AM +F ++     V WN +I+ +      + AL    +M      + +G   
Sbjct: 364 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 423

Query: 545 --VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             ++P+ IT +++L +C+    +++G+   H    +  +   +     +VD++ + G L 
Sbjct: 424 VSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQ 482

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           M+      +P + +   W  ++ A  +HGN
Sbjct: 483 MSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/794 (38%), Positives = 468/794 (58%), Gaps = 26/794 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  L ++   L  +   K++HA +   G  + +V  +  LVN Y   GD       FD I
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL------ 159
           S RN  +WNS+IS      +   A++ F +  L   + P  +T   V+ AC NL      
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           + GK++H   L+ G E + F+  +L+ MY + G    ++ L      RD  +WN ++S  
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFN 278
           CQ+   +EAL+ L EM LEGV  D  T++S+LP C+  + + +G  +H Y +K+G L+ N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FV + L++MY     +    RVFD M +R +  WN++IA Y Q+     A   F  M++
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397

Query: 339 -AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            AG+  +  T+  +     +        ++HGF+++RG    D  + N ++DMY++LG I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKI 456

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE----------INPN 447
           + A  +F  +  +D+++WNT+ITGY  +    +A+ +   M+              + PN
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T ++ILP+ + + AL +G +IHA  IKN L  DV V + LVDMY KCG +  +  +F 
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           Q+P+ + + WN II  +G+HG G +A++  R M+ +GV+P+ +TF+S+  ACSHSG+V E
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGA 626
           G R F++M+ ++G++P   HY C+VDL GRAG +  A+  +  MP     A  W +LLGA
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
            RIH N+E+G +A+  L +++     +YVL++NIY++ G W+   EVR   +++G++K P
Sbjct: 697 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 756

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S IE  ++V  F  G+ +HP+ EK+   L  L  +M+  GYVPD S VL +VEEDEKE
Sbjct: 757 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
            +L  HSE+LAIAFGI+++ P + I++ KNLRVC DCH  TKFIS+I +REII+RD  RF
Sbjct: 817 ILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRF 876

Query: 807 HHFKDGICSCGDYW 820
           H FK+G CSCGDYW
Sbjct: 877 HRFKNGTCSCGDYW 890



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 267/538 (49%), Gaps = 22/538 (4%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           W  ++   VR   L EAV  +    +  G++PD Y FP +LKA  +L D   GK+IH  V
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123

Query: 170 LKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            K G+  D V VA +L+++Y + G      K+FD +  R+  SWN++IS  C       A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183

Query: 229 LDILDEMRLEGVSMDPITVASILPVCAR---SDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           L+    M  E V     T+ S++  C+     + ++ G  +H Y ++ G E N F+ N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + MY K G +  +  +      RD+V+WN+++++  Q+   + A  +   M   G++PD 
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ S+    + L   R  + +H + ++ G   E+  +G+A+VDMY     + S   VF+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           G+  + +  WN +I GY+QN    EA+ +F  MEE   +  N  T   ++PA    GA  
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +   IH  V+K  L  D FV   L+DMY + G+ID AM +F ++     V WN +I+ + 
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482

Query: 526 IHGQGDKALNFFRQM------LDEG-----VRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
                + AL    +M      + +G     ++P+ IT +++L +C+    +++G+   H 
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHA 541

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
              +  +   +     +VD++ + G L M+      +P + +   W  ++ A  +HGN
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/794 (38%), Positives = 468/794 (58%), Gaps = 26/794 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  L ++   L  +   K++HA +   G  + +V  +  LVN Y   GD       FD I
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL------ 159
           S RN  +WNS+IS      +   A++ F +  L   + P  +T   V+ AC NL      
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           + GK++H   L+ G E + F+  +L+ MY + G    ++ L      RD  +WN ++S  
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFN 278
           CQ+   +EAL+ L EM LEGV  D  T++S+LP C+  + + +G  +H Y +K+G L+ N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FV + L++MY     +    RVFD M +R +  WN++IA Y Q+     A   F  M++
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397

Query: 339 -AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            AG+  +  T+  +     +        ++HGF+++RG    D  + N ++DMY++LG I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKI 456

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE----------INPN 447
           + A  +F  +  +D+++WNT+ITGY  +    +A+ +   M+              + PN
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T ++ILP+ + + AL +G +IHA  IKN L  DV V + LVDMY KCG +  +  +F 
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           Q+P+ + + WN II  +G+HG G +A++  R M+ +GV+P+ +TF+S+  ACSHSG+V E
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGA 626
           G R F++M+ ++G++P   HY C+VDL GRAG +  A+  +  MP     A  W +LLGA
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
            RIH N+E+G +A+  L +++     +YVL++NIY++ G W+   EVR   +++G++K P
Sbjct: 697 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 756

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S IE  ++V  F  G+ +HP+ EK+   L  L  +M+  GYVPD S VL +VEEDEKE
Sbjct: 757 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
            +L  HSE+LAIAFGI+++ P + I++ KNLRVC DCH  TKFIS+I +REII+RD  RF
Sbjct: 817 ILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRF 876

Query: 807 HHFKDGICSCGDYW 820
           H FK+G CSCGDYW
Sbjct: 877 HRFKNGTCSCGDYW 890



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 267/538 (49%), Gaps = 22/538 (4%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           W  ++   VR   L EAV  +    +  G++PD Y FP +LKA  +L D   GK+IH  V
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123

Query: 170 LKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            K G+  D V VA +L+++Y + G      K+FD +  R+  SWN++IS  C       A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183

Query: 229 LDILDEMRLEGVSMDPITVASILPVCAR---SDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           L+    M  E V     T+ S++  C+     + ++ G  +H Y ++ G E N F+ N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + MY K G +  +  +      RD+V+WN+++++  Q+   + A  +   M   G++PD 
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ S+    + L   R  + +H + ++ G   E+  +G+A+VDMY     + S   VF+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           G+  + +  WN +I GY+QN    EA+ +F  MEE   +  N  T   ++PA    GA  
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +   IH  V+K  L  D FV   L+DMY + G+ID AM +F ++     V WN +I+ + 
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482

Query: 526 IHGQGDKALNFFRQM------LDEG-----VRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
                + AL    +M      + +G     ++P+ IT +++L +C+    +++G+   H 
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHA 541

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
              +  +   +     +VD++ + G L M+      +P + +   W  ++ A  +HGN
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 301/766 (39%), Positives = 453/766 (59%), Gaps = 14/766 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI----SYRNVYTWNSMISVY 120
           ++HAL V +  +  VF +  LV  Y   G +  +R  FD        RN  +WN+MIS Y
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWD 177
           V+  +  +A+  F +  + SG RP+ + F  V+ AC   R+L  G+++H +V++ G+E D
Sbjct: 181 VKNDQSGDAIGVFREM-VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKD 239

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
           VF A +L+ MY + G   +A  +F+ MP  D  SWNA ISG    G+   AL++L +M+ 
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKS 299

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            G+  +  T++S+L  CA +     G  IH ++VK   +F+ FV+  L++MYAK G +  
Sbjct: 300 SGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDD 359

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL--LTLVSLTSIV 355
           A +VFD M  RD++ WN++I+              F  M++ G+  D+   TL S+    
Sbjct: 360 ARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKST 419

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A      ++R VH    + G   +  +I N ++D Y K G ++ A  VF+     D+IS 
Sbjct: 420 ASSEAICHTRQVHALAEKIGLLSDSHVI-NGLIDSYWKCGQLDYAIKVFKESRSDDIISS 478

Query: 416 NTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
            T++T  +Q     +AI++F QM+ +   + P+     S+L A + + A  QG ++HA +
Sbjct: 479 TTMMTALSQCDHGEDAIKLFVQMLRK--GLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL 536

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           IK     DVF    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL
Sbjct: 537 IKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRAL 596

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F +MLDEGV P+HIT  S+L+AC+H+GLV + ++YF  M+E FGI    +HY CM+D+
Sbjct: 597 DLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDI 656

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A   + NMP + +A++WGALLGA R+H + ELG +A+++LF ++ E  G +
Sbjct: 657 LGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTH 716

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL++N YA+ G W+ + +VR L +D  +KK P  S +E+ +KV  F  G+++HP    IY
Sbjct: 717 VLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIY 776

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
            +L  L   M   GYVP+    L DV+  EKE +L+ HSERLA+AF +IS+P  +PI++ 
Sbjct: 777 GKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVK 836

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLR+C DCH   K+IS+I  REII+RD NRFHHF +G CSCGDYW
Sbjct: 837 KNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 163/494 (32%), Positives = 257/494 (52%), Gaps = 19/494 (3%)

Query: 47  EIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  +  +CT    L   +++H  +V +G  K VF++  LV+ Y+ LGD+  +   F+
Sbjct: 205 EFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFE 264

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR-----N 158
            +   +V +WN+ IS  V  G    A++   Q   +SGL P+ +T   VLKAC      N
Sbjct: 265 KMPAADVVSWNAFISGCVTHGHDHRALELLLQMK-SSGLVPNVFTLSSVLKACAGAGAFN 323

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           L  G++IH  ++K   ++D FVA  L+ MY + G  + ARK+FD MP RD   WNA+ISG
Sbjct: 324 L--GRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISG 381

Query: 219 YCQSGNAVEALDILDEMRLEGVSMD--PITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
               G   E L +   MR EG+ +D    T+AS+L   A S+ I     +H    K GL 
Sbjct: 382 CSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLL 441

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            +  V N LI+ Y K G + +A++VF +    D++S  +++ A  Q +    A   F  M
Sbjct: 442 SDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQM 501

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            + G++PD   L SL +    L+     + VH  +++R  F  DV  GNA+V  YAK G 
Sbjct: 502 LRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKR-QFTSDVFAGNALVYAYAKCGS 560

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I  A   F GLP + ++SW+ +I G AQ+G    A+++F  M +   + PN  T  S+L 
Sbjct: 561 IEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLD-EGVAPNHITLTSVLS 619

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSS 513
           A +H G L    K +   +K     D       C++D+ G+ G+++DAM L   +P +++
Sbjct: 620 ACNHAG-LVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQAN 678

Query: 514 SVPWNAIISCHGIH 527
           +  W A++    +H
Sbjct: 679 AAVWGALLGASRVH 692



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 166/586 (28%), Positives = 290/586 (49%), Gaps = 15/586 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F +   L     LH+ L+ SG +     S  L+  Y+     S +R  FD I      +W
Sbjct: 14  FGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSW 71

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           +S+++ Y   G   +A+  F       G+  + +  P VLK   ++  G ++H   +   
Sbjct: 72  SSLVTAYSNNGMPRDALLAFRAMR-GRGVPCNEFALPVVLKCAPDVRFGAQVHALAVATR 130

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDM----PVRDSGSWNAMISGYCQSGNAVEAL 229
              DVFVA +L+ +Y  FG+ + AR++FD+       R++ SWN MIS Y ++  + +A+
Sbjct: 131 LVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAI 190

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            +  EM   G   +    + ++  C  S ++ +G  +H  +V+ G E ++F +N L++MY
Sbjct: 191 GVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMY 250

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  VF++M   DVVSWN+ I+          A      M+ +G+ P++ TL 
Sbjct: 251 SKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLS 310

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRR-GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           S+    A        R +HGF+++    F E V +G  +VDMYAK G ++ A  VF+ +P
Sbjct: 311 SVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG--LVDMYAKHGFLDDARKVFDFMP 368

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            +D+I WN LI+G + +G   E + +F +M +E  +++ N+ T  S+L + +   A+   
Sbjct: 369 RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHT 428

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++HA   K  L  D  V   L+D Y KCG++D A+ +F +      +    +++     
Sbjct: 429 RQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQC 488

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLK 586
             G+ A+  F QML +G+ PD     SLL AC+      +G Q + H+++ +F     + 
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQF--TSDVF 546

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
               +V  + + G +  A      +P R   S W A++G    HG+
Sbjct: 547 AGNALVYAYAKCGSIEDADMAFSGLPERGIVS-WSAMIGGLAQHGH 591


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 288/762 (37%), Positives = 466/762 (61%), Gaps = 10/762 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYVR 122
            +H + V  G    VF    L+  YA  GDL  +R  FD   +   +  +WNS+IS +V 
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
            G   EA+  F +     G+  + YTF   L+AC     +  G+ IH  +LK     DV+
Sbjct: 229 EGESLEALSLFRRMQ-EVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVY 287

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V+ +L+ MY   G    A ++F  M  +D  SWN ++SG  Q+    +A++   +M+  G
Sbjct: 288 VSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSG 347

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              D ++V +++    RS N+L+G+ +H Y +KHG++ N+ + N+LI+MY K   +++  
Sbjct: 348 QKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMG 407

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
             F+ M E+D++SW +IIA Y Q+   + A      +Q   +  D + + S+    + L 
Sbjct: 408 SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLK 467

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
             +  + +HG++++ G  + D++I NA+V++Y +L +++ A  VFE +  KD++SW ++I
Sbjct: 468 SEKLIKEIHGYVLKGG--LADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMI 525

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           T    NGLA EA+E+F  + E N I P+  T VS+L A + + +L++G +IH  +I+   
Sbjct: 526 TCCVHNGLAIEALELFNSLIETN-IEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGF 584

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             +  +A  LVDMY +CG +++A ++F  V +   + W ++I+ +G+HG G  A++ F +
Sbjct: 585 FLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSK 644

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M DE V PDHITF++LL ACSHSGLV EG+++F +M+ E+ ++P  +HY C+VDL  R+ 
Sbjct: 645 MTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSN 704

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            L  A++F++NMP+ P A +W ALLGACRIH N +LG VA+ +L ++++EN G YVL+SN
Sbjct: 705 SLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSN 764

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
            +A  G+W  V+EVRS+ +   LKK PG S IEV NK+  F   +++HP+   IY +L  
Sbjct: 765 TFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQ 824

Query: 720 LTAKMKSL-GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            T  +K   GY      V  DV E+EK  +L  HSERLA+ +G++ +   + ++I KNLR
Sbjct: 825 FTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLR 884

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +C DCH + K  S+I++R ++VRD++RFHHF+ G+CSCGD+W
Sbjct: 885 ICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 188/608 (30%), Positives = 315/608 (51%), Gaps = 19/608 (3%)

Query: 52  DLFQSCTKLHHVKRLHA-LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
           +L  S   L   ++LHA  L     + +VF  TK V+ Y   G    +   FD +S R +
Sbjct: 54  ELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTI 113

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
           +TWN+MI   V  GR  EA++ + +  +  G+  D +TFP VLKAC    +   G +IH 
Sbjct: 114 FTWNAMIGACVSAGRYVEAIELYKEMRVL-GVSLDAFTFPCVLKACGAFKERRLGCEIHG 172

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD--MPVRDSGSWNAMISGYCQSGNA 225
             +K G+   VFV  +L+ MY + G    AR LFD   M   D  SWN++IS +   G +
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           +EAL +   M+  GV  +  T  S L  C     I  G  IH  I+K     +++VSN L
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I MYA  G M  A RVF  M+ +D VSWN++++   Q++    A   F  MQ +G +PD 
Sbjct: 293 IAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQ 352

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           ++++++ +   +  +      VH + ++ G    ++ IGN+++DMY K   +    + FE
Sbjct: 353 VSVLNMIAASGRSANLLAGMEVHAYAIKHG-IDSNMHIGNSLIDMYGKCCCVKYMGSAFE 411

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGAL 464
            +P KD+ISW T+I GYAQN    +A+ + + ++ E  +++P      SIL A S + + 
Sbjct: 412 YMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMM--IGSILLACSGLKSE 469

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           +   +IH  V+K  L  D+ +   +V++YG+   +D A  +F  +     V W ++I+C 
Sbjct: 470 KLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCC 528

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKP 583
             +G   +AL  F  +++  + PD IT VS+L A +    + +G+  +  ++++ F ++ 
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEG 588

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            + +   +VD++ R G +  A N    +  R D  +W +++ A  +HG    G  A D  
Sbjct: 589 LIAN--SLVDMYARCGTMENARNIFNYVKQR-DLILWTSMINANGMHG---CGKDAIDLF 642

Query: 644 FEVDSENV 651
            ++  ENV
Sbjct: 643 SKMTDENV 650


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 330/869 (37%), Positives = 494/869 (56%), Gaps = 86/869 (9%)

Query: 17  LPLLQAHRPL-------FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHAL 69
           LP L+   PL       FS A+++  ++               LF  C  L   + +H  
Sbjct: 5   LPRLKPKPPLLFLTTFFFSTASSTTDLT-------------STLFHQCKSLASAELIHQQ 51

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGD----LSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           L+V G        T +++ Y         LS  R    H S   V+ WN +I   V  G 
Sbjct: 52  LLVQG---LPHDPTHIISMYLTFNSPAKALSVLRRL--HPSSHTVFWWNQLIRRSVHLGF 106

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
           L + +   Y+     G RPD YTFP VLKAC  +     G  +H  V   GFEW+VFV  
Sbjct: 107 LEDVLQ-LYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 165

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSG---SWNAMISGYCQSGNAVEALDILDEMRLE- 238
            L+ MY R G    AR++FD+M  R  G   SWN++++ Y Q G+++ A+ + + M  + 
Sbjct: 166 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 225

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G+  D +++ ++LP CA       G  +H Y ++ GL  ++FV N +++MYAK GMM  A
Sbjct: 226 GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEA 285

Query: 299 LRVFDQMMERDVVSWNS-----------------------------------IIAAYEQS 323
            +VF++M  +DVVSWN+                                   +IA Y Q 
Sbjct: 286 NKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQR 345

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM----- 378
                A   F  M+  G +P+++TLVSL S  A      + +  H   ++  W +     
Sbjct: 346 GLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIK--WILNLDEN 403

Query: 379 ---EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD--VISWNTLITGYAQNGLASEAIE 433
              +D+++ NA++DMY+K     +A A+F+ +P KD  V++W  LI G AQ+G A+EA+E
Sbjct: 404 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 463

Query: 434 VF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVD 491
           +F QM++  N + PN  T    L A + +GALR G +IHA V++N      +FVA CL+D
Sbjct: 464 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY K G +D A  +F  + + + V W ++++ +G+HG+G++AL  F +M   G+ PD +T
Sbjct: 524 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVT 583

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           FV +L ACSHSG+V +G  YF+ M ++FG+ P  +HY CMVDL  RAG L  A   I+ M
Sbjct: 584 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 643

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P++P  ++W ALL ACR++ N+ELG  A+++L E++S N G Y L+SNIYAN   W+ V 
Sbjct: 644 PMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVA 703

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +R L ++ G+KK PG S ++       F+ G+ +HP  ++IYD LR+L  ++K+LGYVP
Sbjct: 704 RIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVP 763

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D  F L DV+++EK  +L+ HSE+LA+A+GI+++ P +PI+I KNLR CGDCH+   +IS
Sbjct: 764 DNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYIS 823

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I E EIIVRDS+RFHHFK+G CSC  YW
Sbjct: 824 IIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 305/805 (37%), Positives = 465/805 (57%), Gaps = 37/805 (4%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  + ++ + L  +K   ++HA  V  G    +V  +  LVN Y   G +      FD I
Sbjct: 95  FPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRI 154

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---- 161
           + R+  +WNS I+   R  +  +A++ F    + + +    +T   V  AC NL      
Sbjct: 155 TDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMEN-MELSSFTLVSVALACSNLGVMHGL 213

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             GK++H   L++G +   F   +L+ MY + G  + ++ LF+    RD  SWN MIS +
Sbjct: 214 RLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSF 272

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFN 278
            QS    EAL     M LEGV +D +T+AS+LP C+  + +  G  IH Y++++  L  N
Sbjct: 273 SQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIEN 332

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN-DPITAHGFFTTMQ 337
            FV + L++MY     +    RVFD ++ R +  WN++I+ Y ++  D      F   ++
Sbjct: 333 SFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK 392

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            AG+ P+  T+ S+           N  S+HG+ ++ G F ED  + NA++DMY+++G +
Sbjct: 393 VAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLG-FKEDRYVQNALMDMYSRMGKM 451

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI------------- 444
           + +  +F+ + V+D +SWNT+ITGY  +G  S A+ +   M+                  
Sbjct: 452 DISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKG 511

Query: 445 ---NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
               PN  T +++LP  + + A+ +G +IHA  I+N L  D+ V + LVDMY KCG ++ 
Sbjct: 512 GPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNL 571

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR-----PDHITFVSLL 556
           +  +F ++P  + + WN +I   G+HG+G++AL  F+ M+ E  R     P+ +TF+++ 
Sbjct: 572 SRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVF 631

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSHSGL+SEG   F+ M+ + G++P   HY C+VDL GRAG L  A+  +  MP   D
Sbjct: 632 AACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFD 691

Query: 617 -ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
               W +LLGACRIH N+ELG VA+  L  ++     +YVL+SNIY++ G W    EVR 
Sbjct: 692 KVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRK 751

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
             R  G+KK PG S IE  ++V  F  G+ +HP+ E+++  L  L+ KM+  GYVPD S 
Sbjct: 752 NMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSC 811

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           VL +V+EDEKE++L  HSE+LAIAFGI+++PP + I++ KNLRVC DCH  TKFIS+I E
Sbjct: 812 VLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIME 871

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           REIIVRD  RFHHFK+G CSCGDYW
Sbjct: 872 REIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 274/552 (49%), Gaps = 30/552 (5%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKK 164
           R+  +W   +    R     EA+  + + T+ SG RPD + FP VLKA   L D   G++
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTV-SGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 165 IHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           IH + +K G+    V VA +L++MY + G      K+FD +  RD  SWN+ I+  C+  
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFE 173

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL----LIHLYIVKHGLEFNL 279
              +AL+    M++E + +   T+ S+   C+ +  ++ GL     +H Y ++ G +   
Sbjct: 174 KWEQALEAFRAMQMENMELSSFTLVSVALACS-NLGVMHGLRLGKQLHGYSLRVG-DQKT 231

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           F +N L+ MYAK G +  +  +F+  ++RD+VSWN++I+++ QS+    A  FF  M   
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G++ D +T+ S+    + L      + +H +++R    +E+  +G+A+VDMY     + S
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
              VF+ +  + +  WN +I+GYA+NGL  +A+ +F  M +   + PN  T  S++PA  
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
           H  A      IH   +K     D +V   L+DMY + G++D + ++F  +     V WN 
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471

Query: 520 IISCHGIHGQGDKALNFFRQM-----------------LDEGVRPDHITFVSLLTACSHS 562
           +I+ + + G+   AL    +M                      +P+ IT +++L  C+  
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
             +++G+   H       +   +     +VD++ + G L ++      MP + +   W  
Sbjct: 532 AAIAKGKE-IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNV 589

Query: 623 LLGACRIHGNME 634
           L+ AC +HG  E
Sbjct: 590 LIMACGMHGKGE 601



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 221/436 (50%), Gaps = 17/436 (3%)

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P R + SW   +    +S +  EA+    EM + G   D     ++L   +   ++ +G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 265 LIHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA---Y 320
            IH   VK G    ++ V+N L+NMY K G +    +VFD++ +RD VSWNS IAA   +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT---SIVAQLNDCRNSRSVHGFIMRRGWF 377
           E+    + A   F  MQ   ++    TLVS+    S +  ++  R  + +HG+ +R G  
Sbjct: 173 EKWEQALEA---FRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-- 227

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
            +     NA++ MYAKLG ++ + A+FE    +D++SWNT+I+ ++Q+   SEA+  F++
Sbjct: 228 DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 287

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKC 496
           M     +  +  T  S+LPA SH+  L  G +IHA V++N  L  + FV + LVDMY  C
Sbjct: 288 M-VLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNC 346

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSL 555
            +++    +F  +       WNA+IS +  +G  +KAL  F +M+   G+ P+  T  S+
Sbjct: 347 RQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASV 406

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           + AC H    S  +   H    + G K        ++D++ R G + ++     +M VR 
Sbjct: 407 MPACVHCEAFS-NKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRD 465

Query: 616 DASIWGALLGACRIHG 631
             S W  ++    + G
Sbjct: 466 RVS-WNTMITGYVLSG 480


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 301/741 (40%), Positives = 449/741 (60%), Gaps = 11/741 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           L++ +   GDL  + + F  ++ R++++WN ++  Y + G   EA++ +++  L  G+RP
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM-LWVGIRP 193

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL+ C  L D   G+++H  V++ GFE DV V  +L+ MY + G    AR +F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D MP RD  SWNAMISGY ++   +E L +   MR   V  D +T+ S++  C    +  
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +H Y++K G    + V+N+LI M++  G    A  VF +M  +D+VSW ++I+ YE
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +T M+  G+ PD +T+ S+ S  A L        +H F  R G     V
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTG-LTSYV 432

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           I+ N+++DMY+K   I+ A  VF  +P K+VISW ++I G   N  + EA+  FQ M   
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM--I 490

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN  T VS+L A + +GAL  G +IHA  ++  L FD F+   L+DMY +CGR++ 
Sbjct: 491 LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEP 550

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F    +  +  WN +++ +   G+G  A+  F +M++  V PD ITF SLL ACS 
Sbjct: 551 AWNQFNSCEKDVA-SWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSR 609

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           SG+V++G  YF  M+ +F I P+LKHY  +VDL GRAG L  A+ FI+ MP+ PD +IWG
Sbjct: 610 SGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWG 669

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL ACRI+ N+ELG +A+  +FE+D+++VGYY+L+ N+YA+ GKW+ V  VR + R+  
Sbjct: 670 ALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L   PG S +EV  +V  F TG+  HP+ ++I   L     KM++ G    K     D++
Sbjct: 730 LTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDID 789

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
             + E I   HSERLAIAFG+I++ P +PI + KNL +C +CHN  KFIS++  R I VR
Sbjct: 790 ASKAE-IFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVR 848

Query: 802 DSNRFHHFKDGICSCGD--YW 820
           D+ +FHHFKDG+CSCGD  YW
Sbjct: 849 DTEQFHHFKDGVCSCGDEGYW 869



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 159/504 (31%), Positives = 272/504 (53%), Gaps = 11/504 (2%)

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T+  +L+ C   R   +G ++H  V K      V +  +LL M+ RFG    A  +F  M
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD  SWN ++ GY ++G   EAL++   M   G+  D  T   +L  C    ++  G 
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +HL+++++G E ++ V N LI MY K G +  A  VFD+M  RD +SWN++I+ Y +++
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             +     F  M++  + PDL+T+ S+ S    L D R  R VHG++++ G F+ +V + 
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG-FVAEVSVN 334

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N+++ M++ +G  + A  VF  +  KD++SW  +I+GY +NGL  +A+E + +ME    +
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH-EGV 393

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P++ T  S+L A + +G L +GI +H    +  L   V VA  L+DMY KC  ID A+ 
Sbjct: 394 VPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F+++P  + + W +II    ++ +  +AL FF+QM+   ++P+ +T VS+L+AC+  G 
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGA 512

Query: 565 VSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           +S G+  + H ++   G    L +   ++D++ R G +  A N  Q      D + W  L
Sbjct: 513 LSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVRCGRMEPAWN--QFNSCEKDVASWNIL 568

Query: 624 LGACRIHGNMELGAVASDRLFEVD 647
           L      G   L      ++ E D
Sbjct: 569 LTGYAQQGKGGLAVELFHKMIESD 592



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 247/481 (51%), Gaps = 13/481 (2%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  L  + R   +H  ++  G    V     L+  Y   GD+  +R  FD + 
Sbjct: 198 FPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP 257

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+  +WN+MIS Y       E +  F+       + PD  T   V+ AC  L D   G+
Sbjct: 258 RRDRISWNAMISGYFENDVCLEGLRLFFMMR-EFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+K GF  +V V  SL+ M+   G  + A  +F  M  +D  SW AMISGY ++G
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A++    M  EGV  D IT+AS+L  CA    +  G+++H +  + GL   + V+N
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+MY+K   +  AL VF ++  ++V+SW SII     +     A  FF  M  + ++P
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKP 495

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TLVS+ S  A++      + +H   +R G    D  + NA++DMY + G +  A   
Sbjct: 496 NSVTLVSVLSACARIGALSCGKEIHAHALRTGLGF-DGFLPNALLDMYVRCGRMEPAWNQ 554

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     KDV SWN L+TGYAQ G    A+E+F  M E +++NP++ T+ S+L A S  G 
Sbjct: 555 FNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIE-SDVNPDEITFTSLLCACSRSGM 612

Query: 464 LRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
           +  G++   +   K  +  ++     +VD+ G+ GR++DA     ++P       W A++
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672

Query: 522 S 522
           +
Sbjct: 673 N 673



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 240/504 (47%), Gaps = 16/504 (3%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N++I   C  G+  +AL  LD M+   VS++  T  ++L +C        G  +H Y+ K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                 + + N L++M+ +FG +  A  VF +M ERD+ SWN ++  Y ++     A   
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M   GI+PD+ T   +      L D    R VH  ++R G F  DV + NA++ MY 
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG-FESDVDVVNALITMYV 241

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G I SA  VF+ +P +D ISWN +I+GY +N +  E + +F MM E   ++P+  T  
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFF-VDPDLMTMT 300

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S++ A   +G  R G ++H  VIK     +V V   L+ M+   G  D+A  +F ++   
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             V W A+IS +  +G  +KA+  +  M  EGV PD IT  S+L+AC+  GL+ +G    
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG---- 416

Query: 573 HMMQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            +M  EF  +  L  Y      ++D++ +   +  A      +P +   S    +LG   
Sbjct: 417 -IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRL 475

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
            + + E        +  +   +V    ++S   A +G      E+ + A   GL    G+
Sbjct: 476 NYRSFEALFFFQQMILSLKPNSVTLVSVLSAC-ARIGALSCGKEIHAHALRTGL----GF 530

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEK 712
                N  +D++    R  P + +
Sbjct: 531 DGFLPNALLDMYVRCGRMEPAWNQ 554



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 193/427 (45%), Gaps = 17/427 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H  ++ +G +  V  +  L+  ++++G    +   F  + ++++ +W +MIS Y + 
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFV 180
           G   +AV+  Y      G+ PD  T   VL AC  L     G  +H    + G    V V
Sbjct: 376 GLPEKAVET-YTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A SL+ MY +    + A ++F  +P ++  SW ++I G   +  + EAL    +M L  +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SL 493

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + +T+ S+L  CAR   +  G  IH + ++ GL F+ F+ N L++MY + G M  A  
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            F+   E+DV SWN ++  Y Q      A   F  M ++ + PD +T  SL    ++   
Sbjct: 554 QFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGM 612

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
             +       +  +     ++    +VVD+  + G +  A    + +P+  D   W  L+
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672

Query: 420 TG---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
                Y    L   A + +F+M  +      + G Y+ +   Y+  G   +  ++   + 
Sbjct: 673 NACRIYQNVELGELAAQHIFEMDTK------SVGYYILLCNLYADSGKWDEVARVRKIMR 726

Query: 476 KNCLCFD 482
           +N L  D
Sbjct: 727 ENRLTVD 733


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 292/760 (38%), Positives = 449/760 (59%), Gaps = 7/760 (0%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRC 123
           ++HA+ + +G    VF +  LV  Y   G +  +R  FD   S RN  +WN ++S YV+ 
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            +  +A+  F +  + SG++P  + F  V+ AC   RN+  G+++H  V+++G+E DVF 
Sbjct: 181 DQCGDAIQVFGEM-VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 239

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G  ++A  +F+ MP  D  SWNA+ISG   +G+   A+++L +M+  G+
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 299

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +   ++SIL  CA +     G  IH +++K   + + ++   L++MYAK   +  A++
Sbjct: 300 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 359

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  RD++ WN++I+          A   F  +++ G+  +  TL ++    A L  
Sbjct: 360 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 419

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
              +R VH    + G F+ D  + N ++D Y K   ++ A  VFE     D+I+  ++IT
Sbjct: 420 ASATRQVHALAEKIG-FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 478

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
             +Q      AI++F  M     + P+     S+L A + + A  QG ++HA +IK    
Sbjct: 479 ALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D F    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL  F +M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +DEG+ P+HIT  S+L AC+H+GLV E +RYF+ M+E FGI    +HY CM+DL GRAG 
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   + +MP + +AS+WGALLGA R+H + ELG +A+++LF ++ E  G +VL++N 
Sbjct: 658 LDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 717

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G W  V +VR L +D  +KK P  S +EV +KV  F  G+++HP  ++IY +L  L
Sbjct: 718 YASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 777

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              M   GY+P+    L D++  EKE +L+ HSERLA+AF ++S+PP +PI++ KNLR+C
Sbjct: 778 GDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 837

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   KFIS I  REII+RD NRFHHF+DG CSCGDYW
Sbjct: 838 RDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 281/569 (49%), Gaps = 10/569 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LHA L+ SG + ++     L++FY+       +R  FD I      +W+S+++ Y   G 
Sbjct: 26  LHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
              A+  F+      G+  + +  P VLK   +   G ++H   +  GF  DVFVA +L+
Sbjct: 84  PRSAIQAFHGMR-AEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALV 142

Query: 186 HMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            MY  FG  + AR++FD+    R++ SWN ++S Y ++    +A+ +  EM   G+    
Sbjct: 143 AMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
              + ++  C  S NI +G  +H  +V+ G E ++F +N L++MY K G +  A  +F++
Sbjct: 203 FGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEK 262

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M + DVVSWN++I+    +     A      M+ +G+ P++  L S+    A        
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +HGF+++     +D  IG  +VDMYAK   ++ A  VF+ +  +D+I WN LI+G + 
Sbjct: 323 RQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSH 381

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
            G   EA  +F  + +   +  N+ T  ++L + + + A     ++HA   K    FD  
Sbjct: 382 GGRHDEAFSIFYGLRK-EGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAH 440

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V   L+D Y KC  + DA+ +F +      +   ++I+       G+ A+  F +ML +G
Sbjct: 441 VVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG 500

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           + PD     SLL AC+      +G Q + H+++ +F       +   +V  + + G +  
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIED 558

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGN 632
           A     ++P R   S W A++G    HG+
Sbjct: 559 AELAFSSLPERGVVS-WSAMIGGLAQHGH 586



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 252/493 (51%), Gaps = 13/493 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           +  E  F  +  +CT   ++   +++HA++V  G  K VF++  LV+ Y  +G +  +  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            F+ +   +V +WN++IS  V  G    A++   Q   +SGL P+ +    +LKAC    
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK-SSGLVPNVFMLSSILKACAGAG 317

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G++IH  ++K   + D ++   L+ MY +    + A K+FD M  RD   WNA+IS
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G    G   EA  I   +R EG+ ++  T+A++L   A  +   +   +H    K G  F
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V N LI+ Y K   +  A+RVF++    D+++  S+I A  Q +    A   F  M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G++PD   L SL +  A L+     + VH  +++R  FM D   GNA+V  YAK G I
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSI 556

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             A   F  LP + V+SW+ +I G AQ+G    A+E+F  M +   INPN  T  S+L A
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD-EGINPNHITMTSVLCA 615

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            +H G + +  K +   +K     D      +C++D+ G+ G++DDAM L   +P ++++
Sbjct: 616 CNHAGLVDEA-KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674

Query: 515 VPWNAIISCHGIH 527
             W A++    +H
Sbjct: 675 SVWGALLGASRVH 687


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 302/818 (36%), Positives = 466/818 (56%), Gaps = 44/818 (5%)

Query: 44  ESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           ++  +    +   C+ L  +K    +H  +V  G ++ VF S+  VNFYA    +  ++ 
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD + +R+V TWNS+ S YV CG   + ++ F +  L  G++PD  T   +L AC +L 
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVL-DGVKPDPVTVSCILSACSDLQ 256

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           D   GK IH   LK G   +VFV+ +L+++Y        A+ +FD MP R+  +WN++ S
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y   G   + L++  EM L GV  DP+ ++SILP C++  ++ SG  IH + VKHG+  
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           ++FV   L+N+YA    +R A  VFD M  R+VV+WNS+ + Y     P      F  M 
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
             G++PDL+T++S+    + L D ++ + +HGF +R G  +EDV + NA++ +YAK   +
Sbjct: 437 LNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHG-MVEDVFVCNALLSLYAKCVCV 495

Query: 398 NSACAVFEGLPVKDVISWNTLITGY----------------------------------- 422
             A  VF+ +P ++V SWN ++T Y                                   
Sbjct: 496 REAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGC 555

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +N    EA+E+F+ M+      P++ T  SIL A S    LR G +IH  V ++   +D
Sbjct: 556 VKNSRIEEAMEIFRKMQTMG-FKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWD 614

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           +     LVDMY KCG +  + ++F  +P      WN +I  +G+HG G +AL+ F +ML 
Sbjct: 615 LARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLL 674

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             V+PD  TF  +L+ACSHS LV EG + F+ M  +  ++P  +HY C+VD++ RAG L 
Sbjct: 675 SMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLE 734

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+ FIQ MP+ P A  W A L  CR++ N+EL  +++ +LFE+D      YV + NI  
Sbjct: 735 EAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILV 794

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
               W    ++R L ++RG+ KTPG S   V N+V  F  G++++ + +KIY+ L  L A
Sbjct: 795 TAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFA 854

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           K+K+ GY PD  +VL D++++EK   L +HSE+LA+AFGI++   +S I++FKNLR+CGD
Sbjct: 855 KIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGD 914

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CHN  K++S +    I+VRDS RFHHFK+G CSC D+W
Sbjct: 915 CHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 196/700 (28%), Positives = 339/700 (48%), Gaps = 65/700 (9%)

Query: 20  LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTV 79
           ++  +P+F A A +   S D L+                    VK+ H      G +  V
Sbjct: 36  IKPDKPVFMAVAKACAASRDALK--------------------VKQFHDDATRCGVMSDV 75

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
                 ++ Y     +  +R  FD +  R+V TWNS+ + YV CG   + ++ F +  L 
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135

Query: 140 SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
             ++ +  T   +L  C +L D   GK+IH  V++ G   DVFV+++ ++ Y +      
Sbjct: 136 K-VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVRE 194

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A+ +FD MP RD  +WN++ S Y   G   + L++  EM L+GV  DP+TV+ IL  C+ 
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSD 254

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
             ++ SG  IH + +KHG+  N+FVSN L+N+Y     +R A  VFD M  R+V++WNS+
Sbjct: 255 LQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL 314

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
            + Y     P      F  M   G++PD + + S+    +QL D ++ +++HGF ++ G 
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG- 373

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            +EDV +  A+V++YA    +  A  VF+ +P ++V++WN+L + Y   G   + + VF+
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFR 433

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M   N + P+  T +SIL A S +  L+ G  IH   +++ +  DVFV   L+ +Y KC
Sbjct: 434 EM-VLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKC 492

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
             + +A  +F  +P      WN I++ +  + + +K L  F QM  + V+ D IT+  ++
Sbjct: 493 VCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVI 552

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKP------------------------------HLK 586
             C  +  + E    F  MQ   G KP                              H K
Sbjct: 553 GGCVKNSRIEEAMEIFRKMQ-TMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWK 611

Query: 587 HY-----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            +       +VD++ + G L ++ N    MP++ D   W  ++ A  +HGN +      +
Sbjct: 612 DWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGNGKEALSLFE 670

Query: 642 RLF--EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           ++    V  ++  +  ++S    ++   EGV    S++RD
Sbjct: 671 KMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRD 710



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 177/563 (31%), Positives = 294/563 (52%), Gaps = 20/563 (3%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
           G  +EA+   Y  +   G++PD   F  V KAC   R+ +  K+ H    + G   DV +
Sbjct: 19  GLPNEAIK-IYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             + +H Y +      AR++FDD+  RD  +WN++ + Y   G   + L++  +M L  V
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +P+TV+SILP C+   ++ SG  IH ++V+HG+  ++FVS+  +N YAK   +R A  
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  RDVV+WNS+ + Y     P      F  M   G++PD +T+  + S  + L D
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            ++ +++HGF ++ G  +E+V + NA+V++Y     +  A AVF+ +P ++VI+WN+L +
Sbjct: 258 LKSGKAIHGFALKHG-MVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            Y   G   + + VF+ M   N + P+     SILPA S +  L+ G  IH   +K+ + 
Sbjct: 317 CYVNCGFPQKGLNVFREM-GLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMV 375

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            DVFV T LV++Y  C  + +A ++F  +P  + V WN++ SC+   G   K LN FR+M
Sbjct: 376 EDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREM 435

Query: 541 LDEGVRPDHITFVSLLTACS-----HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
           +  GV+PD +T +S+L ACS      SG V  G    H M E+  +         ++ L+
Sbjct: 436 VLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFV------CNALLSLY 489

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF--EVDSENVGY 653
            +   +  A      +P R  AS W  +L A   +   E G     ++   EV ++ + +
Sbjct: 490 AKCVCVREAQVVFDLIPHREVAS-WNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITW 548

Query: 654 YVLMSNIYANVGKWEGVDEVRSL 676
            V++     N    E ++  R +
Sbjct: 549 SVVIGGCVKNSRIEEAMEIFRKM 571


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/803 (37%), Positives = 466/803 (58%), Gaps = 49/803 (6%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           C  +  ++ +H     S   ++++ + +L+N  +  G ++ +R  FD +  ++ Y+WN+M
Sbjct: 45  CKFMAFLRSIHTTTAAS--YESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTM 102

Query: 117 ISVYVRCGRLSEAVDCF------------------------------YQFTLTSGLRPDF 146
           IS YV  GRL EA + F                              ++     G +   
Sbjct: 103 ISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQ 162

Query: 147 YTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           +T   VL+ C +L     G+ IH  V+K GFE +VFV   L+ MY +    + A  LF  
Sbjct: 163 FTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKG 222

Query: 204 MPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           +    ++   W AM++GY Q+G+  +A++    M  +GV  +  T  +IL  C+      
Sbjct: 223 LEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARC 282

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +H +IVK G   N++V + L++MYAK G +++A  + + M + DVVSWNS++  + 
Sbjct: 283 FGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFV 342

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR----NSRSVHGFIMRRGWF 377
           +      A   F  M    ++ D  T  S+      LN C     N +SVHG I++ G F
Sbjct: 343 RHGLEEEALRLFKNMHGRNMKIDDYTFPSV------LNCCVVGSINPKSVHGLIIKTG-F 395

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
               ++ NA+VDMYAK G ++ A  VFE +  KDVISW +L+TGYAQN    E++++F  
Sbjct: 396 ENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCD 455

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M     +NP+Q    SIL A + +  L  G ++H   IK+ L +   V   LV MY KCG
Sbjct: 456 MR-VTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCG 514

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            +DDA ++F  +     + W AII  +  +G+G  +L F+  M+  G RPD ITF+ LL 
Sbjct: 515 CLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLF 574

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSH+GLV EG++YF  M + +GIKP  +HY CM+DLFGR+G L  A   +  M V+PDA
Sbjct: 575 ACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDA 634

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
           ++W +LL ACR+H N+EL   A+  LFE++  N   YV++SN+Y+   KW  V ++R L 
Sbjct: 635 TVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLM 694

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           + +G+ K PG S +E+N++V+ F + +R HP+  +IY ++  +  ++K  GYVPD SF L
Sbjct: 695 KSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSL 754

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            D++++ KE  L  HSE+LA+AFG++++PP +PI+IFKNLRVCGDCH+  K+IS++  R 
Sbjct: 755 HDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRH 814

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RDSN FHHF++G CSCGDYW
Sbjct: 815 IILRDSNCFHHFREGECSCGDYW 837


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 292/760 (38%), Positives = 449/760 (59%), Gaps = 7/760 (0%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRC 123
           ++HA+ + +G    VF +  LV  Y   G +  +R  FD   S RN  +WN ++S YV+ 
Sbjct: 28  QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 87

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            +  +A+  F +  + SG++P  + F  V+ AC   RN+  G+++H  V+++G+E DVF 
Sbjct: 88  DQCGDAIQVFGEM-VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 146

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G  ++A  +F+ MP  D  SWNA+ISG   +G+   A+++L +M+  G+
Sbjct: 147 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 206

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +   ++SIL  CA +     G  IH +++K   + + ++   L++MYAK   +  A++
Sbjct: 207 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 266

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  RD++ WN++I+          A   F  +++ G+  +  TL ++    A L  
Sbjct: 267 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 326

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
              +R VH    + G F+ D  + N ++D Y K   ++ A  VFE     D+I+  ++IT
Sbjct: 327 ASATRQVHALAEKIG-FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 385

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
             +Q      AI++F  M     + P+     S+L A + + A  QG ++HA +IK    
Sbjct: 386 ALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 444

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D F    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL  F +M
Sbjct: 445 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 504

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +DEG+ P+HIT  S+L AC+H+GLV E +RYF+ M+E FGI    +HY CM+DL GRAG 
Sbjct: 505 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 564

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   + +MP + +AS+WGALLGA R+H + ELG +A+++LF ++ E  G +VL++N 
Sbjct: 565 LDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 624

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G W  V +VR L +D  +KK P  S +EV +KV  F  G+++HP  ++IY +L  L
Sbjct: 625 YASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDEL 684

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              M   GY+P+    L D++  EKE +L+ HSERLA+AF ++S+PP +PI++ KNLR+C
Sbjct: 685 GDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 744

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   KFIS I  REII+RD NRFHHF+DG CSCGDYW
Sbjct: 745 RDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 252/493 (51%), Gaps = 13/493 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           +  E  F  +  +CT   ++   +++HA++V  G  K VF++  LV+ Y  +G +  +  
Sbjct: 106 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 165

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            F+ +   +V +WN++IS  V  G    A++   Q   +SGL P+ +    +LKAC    
Sbjct: 166 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK-SSGLVPNVFMLSSILKACAGAG 224

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G++IH  ++K   + D ++   L+ MY +    + A K+FD M  RD   WNA+IS
Sbjct: 225 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 284

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G    G   EA  I   +R EG+ ++  T+A++L   A  +   +   +H    K G  F
Sbjct: 285 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 344

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V N LI+ Y K   +  A+RVF++    D+++  S+I A  Q +    A   F  M 
Sbjct: 345 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 404

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G++PD   L SL +  A L+     + VH  +++R  FM D   GNA+V  YAK G I
Sbjct: 405 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSI 463

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             A   F  LP + V+SW+ +I G AQ+G    A+E+F  M +   INPN  T  S+L A
Sbjct: 464 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD-EGINPNHITMTSVLCA 522

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            +H G + +  K +   +K     D      +C++D+ G+ G++DDAM L   +P ++++
Sbjct: 523 CNHAGLVDEA-KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 581

Query: 515 VPWNAIISCHGIH 527
             W A++    +H
Sbjct: 582 SVWGALLGASRVH 594



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 244/488 (50%), Gaps = 7/488 (1%)

Query: 147 YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-P 205
           +  P VLK   +   G ++H   +  GF  DVFVA +L+ MY  FG  + AR++FD+   
Sbjct: 11  FALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGS 70

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R++ SWN ++S Y ++    +A+ +  EM   G+       + ++  C  S NI +G  
Sbjct: 71  ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 130

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H  +V+ G E ++F +N L++MY K G +  A  +F++M + DVVSWN++I+    +  
Sbjct: 131 VHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGH 190

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A      M+ +G+ P++  L S+    A        R +HGF+++     +D  IG 
Sbjct: 191 DHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY-IGV 249

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            +VDMYAK   ++ A  VF+ +  +D+I WN LI+G +  G   EA  +F  + +   + 
Sbjct: 250 GLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRK-EGLG 308

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
            N+ T  ++L + + + A     ++HA   K    FD  V   L+D Y KC  + DA+ +
Sbjct: 309 VNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 368

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F +      +   ++I+       G+ A+  F +ML +G+ PD     SLL AC+     
Sbjct: 369 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 428

Query: 566 SEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            +G Q + H+++ +F       +   +V  + + G +  A     ++P R   S W A++
Sbjct: 429 EQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMI 485

Query: 625 GACRIHGN 632
           G    HG+
Sbjct: 486 GGLAQHGH 493


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 301/760 (39%), Positives = 460/760 (60%), Gaps = 10/760 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCG 124
           +H L V SG  ++   +  LV  YA  G L  +   F+ +   R+V +WNS IS  V+ G
Sbjct: 185 VHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNG 244

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
              EA+D F +   + G   + YT   VL+ C  L     G+++H ++LK G E+++   
Sbjct: 245 MFLEALDLFRRMQ-SDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN 303

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
           A LL MY R G  + A ++F ++  +D  SWN+M+S Y Q+    EA+D   EM   G +
Sbjct: 304 A-LLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFN 362

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D   + S+L        +++G  +H Y VK  L+ +L ++N L++MY K   +  + RV
Sbjct: 363 PDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARV 422

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M  +D VSW +IIA Y QS+    A G F T Q+ GI+ D + + S+    + L   
Sbjct: 423 FDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSI 482

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              + VH + +R G    D+I+ N ++D+Y + G +  A  +FE L  KD+++W +++  
Sbjct: 483 SLLKQVHSYAIRNGLL--DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNC 540

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           +A+NGL  EA+ +F  M     I P+    V IL A + + +L +G +IH  +I+     
Sbjct: 541 FAENGLLHEAVALFGKMLNAG-IQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPV 599

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +  V + LVDMY  CG ++ A+ +F +      V W A+I+  G+HG G +A+  F++ML
Sbjct: 600 EGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRML 659

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           + GV PDH++F++LL ACSHS LV EG+ Y  MM  ++ ++P  +HY C+VDL GR+G  
Sbjct: 660 ETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQT 719

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A+ FI++MP+ P + +W ALLGACRIH N EL  +A+D+L E++ +N G YVL+SN++
Sbjct: 720 EEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVF 779

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A +GKW  V E+R+   ++GL+K P  S IE+ N V  F   + +H   + I+ +L  +T
Sbjct: 780 AEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEIT 839

Query: 722 AKMKSLG-YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
            K++  G YV D SFVL DV E+EK  +L  HSERLAI+FG+IS+   +P++I KNLRVC
Sbjct: 840 EKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVC 899

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GDCH +TK +S++ EREI+VRD+NRFHHF  G CSCGD+W
Sbjct: 900 GDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 197/660 (29%), Positives = 344/660 (52%), Gaps = 25/660 (3%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALL 70
           R+LCK   L +A R L  AA ++   +P   ++    +D   + ++ ++    ++LHA  
Sbjct: 27  RQLCKDGDLREALRQL--AARSARGRAPPPTDHYGWVLDLVAVRRAVSE---GRQLHAHA 81

Query: 71  VVSGKI---KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           V +G +      F +TKL+  Y   G L  +   FD +  R V++WN++I   +  G   
Sbjct: 82  VATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAG 141

Query: 128 EAVDCFYQFTLT---SGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVA 181
           EAV  +     +   +G  PD  T   VLKAC    DG+   ++H   +K G +    VA
Sbjct: 142 EAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVA 201

Query: 182 ASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +L+ MY + GL + A ++F+ M   RD  SWN+ ISG  Q+G  +EALD+   M+ +G 
Sbjct: 202 NALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGF 261

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           SM+  T   +L VCA    +  G  +H  ++K G EFN+   N L+ MYA+ G +  ALR
Sbjct: 262 SMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMYARCGWVDSALR 320

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF ++ ++D +SWNS+++ Y Q+     A  FF  M Q G  PD   +VSL S V  L  
Sbjct: 321 VFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGR 380

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             N R VH + +++     D+ I N ++DMY K   +  +  VF+ + +KD +SW T+I 
Sbjct: 381 LINGREVHAYAVKQ-RLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIA 439

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            YAQ+   SEAI  F+  ++   I  +     SIL A S + ++    ++H+  I+N L 
Sbjct: 440 CYAQSSRYSEAIGKFRTAQK-EGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL- 497

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D+ +   ++D+YG+CG +  A+++F  + +   V W ++++C   +G   +A+  F +M
Sbjct: 498 LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKM 557

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           L+ G++PD +  V +L A +    +++G+  +  +++ +F ++  +     +VD++   G
Sbjct: 558 LNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSSLVDMYSGCG 615

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLM 657
            +  A         + D  +W A++ A  +HG+ +       R+ E  V  ++V +  L+
Sbjct: 616 SMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 303/793 (38%), Positives = 457/793 (57%), Gaps = 34/793 (4%)

Query: 59  KLHHVKRLHALLVV--SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           +L+  K++HA +     G   +V     LVN Y   G L  +   FD I+ R+  +WNS+
Sbjct: 25  ELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSI 84

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD------GKKIHCSVL 170
           IS   R      A+  F +  L  G  P  +T   +  AC NL        GK+IH    
Sbjct: 85  ISALCRFEEWEVAIKAF-RLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCF 143

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           + G  W  F   +L+ MY + G  + A+ L      RD  +WN+MIS + Q+   +EAL 
Sbjct: 144 RKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALM 202

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMY 289
            L  M LEGV  D +T AS+LP C+  D + +G  IH Y ++   +  N FV + L++MY
Sbjct: 203 FLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMY 262

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTL 348
              G +     VFD +++R +  WN++IA Y QS     A   F  M+ A G+  +  T+
Sbjct: 263 CNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTM 322

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            S+     +         +HG++++RG    +  + NA++DMY+++G I ++  +F+ + 
Sbjct: 323 SSIVPAYVRCEGISRKEGIHGYVIKRG-LETNRYLQNALIDMYSRMGDIKTSKRIFDSME 381

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE---------------INPNQGTYVS 453
            +D++SWNT+IT Y   G +S+A+ +   M+   E                 PN  T ++
Sbjct: 382 DRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMT 441

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +LP  + + AL +G +IHA  I+N L   V V + LVDMY KCG ++ A  +F Q+P  +
Sbjct: 442 VLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRN 501

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEG-----VRPDHITFVSLLTACSHSGLVSEG 568
            + WN II  +G+HG+G ++L  F  M+ EG     V+P  +TF++L  +CSHSG+V EG
Sbjct: 502 VITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEG 561

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD-ASIWGALLGAC 627
              FH M+ E GI+P   HY C+VDL GRAG +  A+  +  MP   D    W +LLGAC
Sbjct: 562 LSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGAC 621

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           RI+ N+E+G +A++ L ++  +   +YVL+SNIY++ G W+    +R   +  G+KK PG
Sbjct: 622 RIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPG 681

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
            S IE  ++V  F  G+ +HP+ EK++D L  L+ ++K  GYVPD + VL D++E+EKE 
Sbjct: 682 CSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKET 741

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           IL  HSE+LAIAFGI+++PP + I++ KNLRVC DCH  +KFIS+I +REII+RD+ RFH
Sbjct: 742 ILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFH 801

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSCGDYW
Sbjct: 802 HFKDGTCSCGDYW 814



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 249/519 (47%), Gaps = 27/519 (5%)

Query: 138 LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFE--WDVFVAASLLHMYCRFG 192
           + SG  PD + FP VLKA    + L  GK+IH  V K G+     V +  +L++MY + G
Sbjct: 2   IGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCG 61

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               A K+FD +  RD  SWN++IS  C+      A+     M +EG      T+ S+  
Sbjct: 62  GLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMAL 121

Query: 253 VCA---RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
            C+   + D +  G  IH    + G  +  F +N L+ MYAK G +  A  +     +RD
Sbjct: 122 ACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRD 180

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           +V+WNS+I+++ Q+   + A  F   M   G++PD +T  S+    + L+  R  + +H 
Sbjct: 181 LVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHA 240

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           + +R    +E+  +G+A+VDMY   G + S   VF+ +  + +  WN +I GYAQ+    
Sbjct: 241 YALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDE 300

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           +A+ +F  ME    +  N  T  SI+PAY     + +   IH  VIK  L  + ++   L
Sbjct: 301 KALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNAL 360

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML-------- 541
           +DMY + G I  +  +F  +     V WN II+ + I G+   AL    +M         
Sbjct: 361 IDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTY 420

Query: 542 -----DEG---VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
                DE     +P+ IT +++L  C+    +++G+   H       +   +     +VD
Sbjct: 421 DGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE-IHAYAIRNLLASQVTVGSALVD 479

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           ++ + G L +A      MP+R +   W  ++ A  +HG 
Sbjct: 480 MYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHGK 517



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 40/341 (11%)

Query: 5   APSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK 64
           A S  D +   L   ++A   L+S A     I P               +  C  +   +
Sbjct: 294 AQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVP--------------AYVRCEGISRKE 339

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
            +H  ++  G     +    L++ Y+ +GD+  S+  FD +  R++ +WN++I+ YV CG
Sbjct: 340 GIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICG 399

Query: 125 RLSEAV---------------DCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           R S+A+               D  Y        +P+  T   VL  C +   L  GK+IH
Sbjct: 400 RSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIH 459

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              ++      V V ++L+ MY + G  N+AR++FD MP+R+  +WN +I  Y   G   
Sbjct: 460 AYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGK 519

Query: 227 EALDILDEMRLEG-----VSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLF 280
           E+L++ ++M  EG     V    +T  ++   C+ S  +  GL L H    +HG+E    
Sbjct: 520 ESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPD 579

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAA 319
               ++++  + G +  A  + + M      V +W+S++ A
Sbjct: 580 HYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGA 620


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 298/760 (39%), Positives = 451/760 (59%), Gaps = 7/760 (0%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWNSMISVYVRC 123
           +LHAL + +G    +F +  LV  Y   G +  +R  FD     RN  +WN ++S YV+ 
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            R S AV  F +  +  G++P+ + F  V+ AC   R+L  G+K+H  V++ G++ DVF 
Sbjct: 181 DRCSHAVKVFGEM-VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT 239

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G   +A  +F  +P  D  SWNA ISG    G+   AL++L +M+  G+
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +  T++SIL  CA S     G  IH ++VK   + + +++  L++MYAK G++  A +
Sbjct: 300 VPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKK 359

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD + +RD+V WN++I+          A   F  M++ G   +  TL ++    A L  
Sbjct: 360 VFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             ++R VH    + G F+ D  + N ++D Y K   +N A  VFE     D+I++ ++IT
Sbjct: 420 ISDTRQVHALAEKLG-FLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMIT 478

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
             +Q     +AI++F  M     ++P+     S+L A + + A  QG ++HA +IK    
Sbjct: 479 ALSQCDHGEDAIKLFMEMLR-KGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            DVF    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL+ F +M
Sbjct: 538 SDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRM 597

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +DE + P+HIT  S+L AC+H+GLV E +RYF+ M+E FGI+   +HY CM+DL GRAG 
Sbjct: 598 VDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGK 657

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   + +MP + +A++WGALL A R+H + ELG +A+++LF ++ E  G +VL++N 
Sbjct: 658 LDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANT 717

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G W+ V +VR L +D  +KK P  S +E+ +KV  F  G+++HP+   IY +L  L
Sbjct: 718 YASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDEL 777

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              M   GYVP+    L DV+++EKE +L+ HSERLA+AF +IS+P  +PI++ KNLR+C
Sbjct: 778 GDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRIC 837

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   KFIS I  REII+RD NRFHHF+DG CSC DYW
Sbjct: 838 RDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/495 (32%), Positives = 260/495 (52%), Gaps = 17/495 (3%)

Query: 44  ESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           +  E  F  +  +CT    L   +++HA+++ +G  K VF++  LV+ Y+ LGD+  +  
Sbjct: 199 QPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAV 258

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--- 157
            F  +   +V +WN+ IS  V  G    A++   Q   +SGL P+ +T   +LKAC    
Sbjct: 259 VFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMK-SSGLVPNVFTLSSILKACAGSG 317

Query: 158 --NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
             NL  G++IH  ++K   + D ++A  L+ MY + GL + A+K+FD +P RD   WNA+
Sbjct: 318 AFNL--GRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNAL 375

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           ISG        EAL +   MR EG  ++  T+A++L   A  + I     +H    K G 
Sbjct: 376 ISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGF 435

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             +  V N LI+ Y K   + +A RVF++    D++++ S+I A  Q +    A   F  
Sbjct: 436 LSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFME 495

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M + G+ PD   L SL +  A L+     + VH  +++R  FM DV  GNA+V  YAK G
Sbjct: 496 MLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFMSDVFAGNALVYTYAKCG 554

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            I  A   F GLP K V+SW+ +I G AQ+G    A++VF  M +   I+PN  T  S+L
Sbjct: 555 SIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVD-EHISPNHITMTSVL 613

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RS 512
            A +H G + +  K +   +K     +       C++D+ G+ G++DDAM L   +P ++
Sbjct: 614 CACNHAGLVDEA-KRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQT 672

Query: 513 SSVPWNAIISCHGIH 527
           ++  W A+++   +H
Sbjct: 673 NAAVWGALLAASRVH 687



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 163/612 (26%), Positives = 298/612 (48%), Gaps = 14/612 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HA L+ SG +  VF +  L++FY+       +R  FD I      +W+S+++ Y     
Sbjct: 26  IHAHLLKSG-LFAVFRN-HLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAM 83

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
             +A+  F      S +R + +  P VLK   +   G ++H   +  G   D+FVA +L+
Sbjct: 84  PRDALGAFRSMRSCS-VRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVANALV 142

Query: 186 HMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            MY  FG  + AR +FD+    R++ SWN ++S Y ++     A+ +  EM   GV  + 
Sbjct: 143 AMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNE 202

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
              + ++  C  S ++ +G  +H  +++ G + ++F +N L++MY+K G +R A  VF +
Sbjct: 203 FGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGK 262

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           + E DVVSWN+ I+          A      M+ +G+ P++ TL S+    A        
Sbjct: 263 VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLG 322

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +HGF+++      D  I   +VDMYAK G+++ A  VF+ +P +D++ WN LI+G + 
Sbjct: 323 RQIHGFMVKAN-ADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSH 381

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
               +EA+ +F  M +    + N+ T  ++L + + + A+    ++HA   K     D  
Sbjct: 382 GAQHAEALSLFCRMRK-EGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSH 440

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V   L+D Y KC  ++ A  +F +      + + ++I+       G+ A+  F +ML +G
Sbjct: 441 VVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 500

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           + PD     SLL AC+      +G Q + H+++ +F     +     +V  + + G +  
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--MSDVFAGNALVYTYAKCGSIED 558

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG-YYVLMSNIYA 662
           A      +P +   S W A++G    HG+   G  A D    +  E++   ++ M+++  
Sbjct: 559 ADLAFSGLPEKGVVS-WSAMIGGLAQHGH---GKRALDVFHRMVDEHISPNHITMTSVLC 614

Query: 663 NVGKWEGVDEVR 674
                  VDE +
Sbjct: 615 ACNHAGLVDEAK 626



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 197/395 (49%), Gaps = 11/395 (2%)

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T+  +L   A + ++L G  IH +++K GL F +F  N+L++ Y+K  +   A RVFD++
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAVF-RNHLLSFYSKCRLPGSARRVFDEI 63

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            +   VSW+S++ AY  +  P  A G F +M+   ++ +      L  ++    D     
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFV---LPVVLKCAPDAGFGT 120

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF-EGLPVKDVISWNTLITGYAQ 424
            +H   M  G    D+ + NA+V MY   G ++ A  VF E    ++ +SWN L++ Y +
Sbjct: 121 QLHALAMATG-LGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVK 179

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           N   S A++VF  M     + PN+  +  ++ A +    L  G K+HA VI+     DVF
Sbjct: 180 NDRCSHAVKVFGEM-VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
            A  LVDMY K G I  A  +F +VP +  V WNA IS   +HG    AL    QM   G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           + P+  T  S+L AC+ SG  + G++    M +      +   +G +VD++ + G L  A
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDA 357

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
                 +P R D  +W AL+  C  HG     A++
Sbjct: 358 KKVFDWIPQR-DLVLWNALISGCS-HGAQHAEALS 390



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 10/289 (3%)

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T+  L +  A          +H  +++ G F    +  N ++  Y+K  +  SA  VF
Sbjct: 4   LETIGPLLTRYAATQSLLQGAHIHAHLLKSGLF---AVFRNHLLSFYSKCRLPGSARRVF 60

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +P    +SW++L+T Y+ N +  +A+  F+ M  C+ +  N+     +L      G  
Sbjct: 61  DEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCS-VRCNEFVLPVVLKCAPDAGF- 118

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC 523
             G ++HA  +   L  D+FVA  LV MYG  G +D+A  +F +     ++V WN ++S 
Sbjct: 119 --GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  + +   A+  F +M+  GV+P+   F  ++ AC+ S  +  G R  H M    G   
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAG-RKVHAMVIRTGYDK 235

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            +     +VD++ + G + MA      +P   D   W A +  C +HG+
Sbjct: 236 DVFTANALVDMYSKLGDIRMAAVVFGKVP-ETDVVSWNAFISGCVLHGH 283


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/737 (40%), Positives = 447/737 (60%), Gaps = 9/737 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           L++ +   GDL  + + F  ++ R++++WN ++  Y + G   EA++ +++  L  G+RP
Sbjct: 135 LLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM-LWVGIRP 193

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL+ C  L D   G+++H  V++ GFE DV V  +L+ MY + G    AR +F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D MP RD  SWNAMISGY ++   +E L +   MR   V  D +T+ S++  C    +  
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +H Y++K G    + V+N+LI M++  G    A  VF +M  +D+VSW ++I+ YE
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +T M+  G+ PD +T+ S+ S  A L        +H F  R G     V
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTG-LTSYV 432

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           I+ N+++DMY+K   I+ A  VF  +P K+VISW ++I G   N  + EA+  FQ M   
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM--I 490

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN  T VS+L A + +GAL  G +IHA  ++  L FD F+   L+DMY +CGR++ 
Sbjct: 491 LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEP 550

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F    +  +  WN +++ +   G+G  A+  F +M++  V PD ITF SLL ACS 
Sbjct: 551 AWNQFNSCEKDVA-SWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSR 609

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           SG+V++G  YF  M+ +F I P+LKHY  +VDL GRAG L  A+ FI+ MP+ PD +IWG
Sbjct: 610 SGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWG 669

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL ACRI+ N+ELG +A+  +FE+D+++VGYY+L+ N+YA+ GKW+ V  VR + R+  
Sbjct: 670 ALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L   PG S +EV  +V  F TG+  HP+ ++I   L     KM++ G    K     D++
Sbjct: 730 LTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDID 789

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
             + E I   HSERLAIAFG+I++ P +PI + KNL +C +CHN  KFIS++  R I VR
Sbjct: 790 ASKAE-IFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVR 848

Query: 802 DSNRFHHFKDGICSCGD 818
           D+ +FHHFKDG+CSCGD
Sbjct: 849 DTEQFHHFKDGVCSCGD 865



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 159/504 (31%), Positives = 272/504 (53%), Gaps = 11/504 (2%)

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T+  +L+ C   R   +G ++H  V K      V +  +LL M+ RFG    A  +F  M
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD  SWN ++ GY ++G   EAL++   M   G+  D  T   +L  C    ++  G 
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +HL+++++G E ++ V N LI MY K G +  A  VFD+M  RD +SWN++I+ Y +++
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEND 275

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             +     F  M++  + PDL+T+ S+ S    L D R  R VHG++++ G F+ +V + 
Sbjct: 276 VCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG-FVAEVSVN 334

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N+++ M++ +G  + A  VF  +  KD++SW  +I+GY +NGL  +A+E + +ME    +
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH-EGV 393

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P++ T  S+L A + +G L +GI +H    +  L   V VA  L+DMY KC  ID A+ 
Sbjct: 394 VPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F+++P  + + W +II    ++ +  +AL FF+QM+   ++P+ +T VS+L+AC+  G 
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGA 512

Query: 565 VSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           +S G+  + H ++   G    L +   ++D++ R G +  A N  Q      D + W  L
Sbjct: 513 LSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVRCGRMEPAWN--QFNSCEKDVASWNIL 568

Query: 624 LGACRIHGNMELGAVASDRLFEVD 647
           L      G   L      ++ E D
Sbjct: 569 LTGYAQQGKGGLAVELFHKMIESD 592



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 249/486 (51%), Gaps = 13/486 (2%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  L  + R   +H  ++  G    V     L+  Y   GD+  +R  FD + 
Sbjct: 198 FPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMP 257

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+  +WN+MIS Y       E +  F+       + PD  T   V+ AC  L D   G+
Sbjct: 258 RRDRISWNAMISGYFENDVCLEGLRLFFMMR-EFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+K GF  +V V  SL+ M+   G  + A  +F  M  +D  SW AMISGY ++G
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A++    M  EGV  D IT+AS+L  CA    +  G+++H +  + GL   + V+N
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+MY+K   +  AL VF ++  ++V+SW SII     +     A  FF  M  + ++P
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKP 495

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TLVS+ S  A++      + +H   +R G    D  + NA++DMY + G +  A   
Sbjct: 496 NSVTLVSVLSACARIGALSCGKEIHAHALRTGLGF-DGFLPNALLDMYVRCGRMEPAWNQ 554

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     KDV SWN L+TGYAQ G    A+E+F  M E +++NP++ T+ S+L A S  G 
Sbjct: 555 FNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIE-SDVNPDEITFTSLLCACSRSGM 612

Query: 464 LRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
           +  G++   +   K  +  ++     +VD+ G+ GR++DA     ++P       W A++
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672

Query: 522 SCHGIH 527
           +   I+
Sbjct: 673 NACRIY 678



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 240/504 (47%), Gaps = 16/504 (3%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N++I   C  G+  +AL  LD M+   VS++  T  ++L +C        G  +H Y+ K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                 + + N L++M+ +FG +  A  VF +M ERD+ SWN ++  Y ++     A   
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M   GI+PD+ T   +      L D    R VH  ++R G F  DV + NA++ MY 
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG-FESDVDVVNALITMYV 241

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G I SA  VF+ +P +D ISWN +I+GY +N +  E + +F MM E   ++P+  T  
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFF-VDPDLMTMT 300

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S++ A   +G  R G ++H  VIK     +V V   L+ M+   G  D+A  +F ++   
Sbjct: 301 SVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK 360

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             V W A+IS +  +G  +KA+  +  M  EGV PD IT  S+L+AC+  GL+ +G    
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG---- 416

Query: 573 HMMQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            +M  EF  +  L  Y      ++D++ +   +  A      +P +   S    +LG   
Sbjct: 417 -IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRL 475

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
            + + E        +  +   +V    ++S   A +G      E+ + A   GL    G+
Sbjct: 476 NYRSFEALFFFQQMILSLKPNSVTLVSVLSAC-ARIGALSCGKEIHAHALRTGL----GF 530

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEK 712
                N  +D++    R  P + +
Sbjct: 531 DGFLPNALLDMYVRCGRMEPAWNQ 554



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 193/427 (45%), Gaps = 17/427 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H  ++ +G +  V  +  L+  ++++G    +   F  + ++++ +W +MIS Y + 
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFV 180
           G   +AV+  Y      G+ PD  T   VL AC  L     G  +H    + G    V V
Sbjct: 376 GLPEKAVET-YTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A SL+ MY +    + A ++F  +P ++  SW ++I G   +  + EAL    +M L  +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SL 493

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + +T+ S+L  CAR   +  G  IH + ++ GL F+ F+ N L++MY + G M  A  
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            F+   E+DV SWN ++  Y Q      A   F  M ++ + PD +T  SL    ++   
Sbjct: 554 QFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGM 612

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
             +       +  +     ++    +VVD+  + G +  A    + +P+  D   W  L+
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672

Query: 420 TG---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
                Y    L   A + +F+M  +      + G Y+ +   Y+  G   +  ++   + 
Sbjct: 673 NACRIYQNVELGELAAQHIFEMDTK------SVGYYILLCNLYADSGKWDEVARVRKIMR 726

Query: 476 KNCLCFD 482
           +N L  D
Sbjct: 727 ENRLTVD 733


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 287/780 (36%), Positives = 470/780 (60%), Gaps = 13/780 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI- 105
           F  + ++C  L   +    +H + V  G  + VF    L+  Y   GDL  +R  FD I 
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 106 -SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVD 161
               +  +WNS+IS +V  G+  EA+  F +     G+  + YTF   L+   +   +  
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQ-EVGVASNTYTFVAALQGVEDPSFVKL 266

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G  IH + LK     DV+VA +L+ MY + G    A ++F  M  RD  SWN ++SG  Q
Sbjct: 267 GMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQ 326

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    +AL+   +M+      D ++V +++    RS N+L+G  +H Y +++GL+ N+ +
Sbjct: 327 NELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQI 386

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N LI+MYAK   ++H    F+ M E+D++SW +IIA Y Q+   + A   F  +Q  G+
Sbjct: 387 GNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGM 446

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
             D + + S+    + L      R +HG++ +R   + D+++ NA+V++Y ++G  + A 
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD--LADIMLQNAIVNVYGEVGHRDYAR 504

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             FE +  KD++SW ++IT    NGL  EA+E+F  +++ N I P+    +S L A +++
Sbjct: 505 RAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN-IQPDSIAIISALSATANL 563

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +L++G +IH  +I+     +  +A+ LVDMY  CG ++++  +F+ V +   + W ++I
Sbjct: 564 SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMI 623

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +G+HG G++A+  F++M DE V PDHITF++LL ACSHSGL+ EG+R+F +M+  + +
Sbjct: 624 NANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQL 683

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P  +HY CMVDL  R+  L  A+ F+++MP++P + +W ALLGAC IH N ELG +A+ 
Sbjct: 684 EPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAK 743

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L + D++N G Y L+SNI+A  G+W  V+EVR   +  GLKK PG S IEV+NK+  F 
Sbjct: 744 ELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFM 803

Query: 702 TGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             +++HP+ + IY +L   T  + K  GY+    FV  +V E+EK  +L  HSERLA+ +
Sbjct: 804 ARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGY 863

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G++ +P  + I+I KNLR+C DCH + K  S++++R ++VRD+NRFHHF+ G+CSCGD+W
Sbjct: 864 GLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 178/587 (30%), Positives = 306/587 (52%), Gaps = 17/587 (2%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL  +   L   ++LHA L+ S    + F +TKL++ Y   G L  +   FD ++ R ++
Sbjct: 54  DLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIF 111

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           TWN+M+  +V  G+  EA++ + +  +  G+  D  TFP VLKAC  L +   G +IH  
Sbjct: 112 TWNAMMGAFVSSGKYLEAIELYKEMRVL-GVAIDACTFPSVLKACGALGESRLGAEIHGV 170

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD--MPVRDSGSWNAMISGYCQSGNAV 226
            +K GF   VFV  +L+ MY + G    AR LFD   M   D+ SWN++IS +   G  +
Sbjct: 171 AVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCL 230

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +   M+  GV+ +  T  + L        +  G+ IH   +K     +++V+N LI
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALI 290

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MYAK G M  A RVF  M+ RD VSWN++++   Q+     A  +F  MQ +  +PD +
Sbjct: 291 AMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQV 350

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           ++++L +   +  +  N + VH + +R G    ++ IGN ++DMYAK   +      FE 
Sbjct: 351 SVLNLIAASGRSGNLLNGKEVHAYAIRNG-LDSNMQIGNTLIDMYAKCCCVKHMGYAFEC 409

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALR 465
           +  KD+ISW T+I GYAQN    EAI +F+ ++ +  +++P      S+L A S + +  
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMM--IGSVLRACSGLKSRN 467

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
              +IH  V K  L  D+ +   +V++YG+ G  D A   F  +     V W ++I+C  
Sbjct: 468 FIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCV 526

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPH 584
            +G   +AL  F  +    ++PD I  +S L+A ++   + +G+  +  ++++ F ++  
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP 586

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +     +VD++   G +  +     ++  R D  +W +++ A  +HG
Sbjct: 587 IA--SSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMINANGMHG 630



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 246/489 (50%), Gaps = 16/489 (3%)

Query: 155 ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
           A + L  G+++H  +LK       F+A  LLHMY + G    A K+FD+M  R   +WNA
Sbjct: 58  AVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNA 115

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           M+  +  SG  +EA+++  EMR+ GV++D  T  S+L  C        G  IH   VK G
Sbjct: 116 MMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG 175

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQ-MMER-DVVSWNSIIAAYEQSNDPITAHGF 332
               +FV N LI MY K G +  A  +FD  MME+ D VSWNSII+A+      + A   
Sbjct: 176 FGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSL 235

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  MQ+ G+  +  T V+    V   +  +    +HG  ++   F  DV + NA++ MYA
Sbjct: 236 FRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHF-ADVYVANALIAMYA 294

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G +  A  VF  +  +D +SWNTL++G  QN L  +A+  F+ M+   +  P+Q + +
Sbjct: 295 KCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQ-KPDQVSVL 353

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           +++ A    G L  G ++HA  I+N L  ++ +   L+DMY KC  +      F  +   
Sbjct: 354 NLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEK 413

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             + W  II+ +  +    +A+N FR++  +G+  D +   S+L AC  SGL S   R F
Sbjct: 414 DLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC--SGLKS---RNF 468

Query: 573 HMMQEEFGIKPHLKH---YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
                 +  K  L        +V+++G  GH   A    +++  + D   W +++  C +
Sbjct: 469 IREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSK-DIVSWTSMITCC-V 526

Query: 630 HGNMELGAV 638
           H  + + A+
Sbjct: 527 HNGLPVEAL 535


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/777 (38%), Positives = 443/777 (57%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   CTK+      ++LHAL+   G     +    LV  Y+ + +   +   F  + 
Sbjct: 216 FSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ 275

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            ++  ++NS+IS   + G    A++ F +      L+PD  T   +L AC +   L  G+
Sbjct: 276 SKDEVSFNSLISGLAQQGFSDGALELFTKMK-RDYLKPDCVTVASLLSACASNGALCKGE 334

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+K G   D+ V  +LL +Y        A ++F      +   WN M+  + +  
Sbjct: 335 QLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLD 394

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           N  E+  I  +M+++G+  +  T  SIL  C     +  G  IH  ++K G +FN++V +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G +  A  +   + E DVVSW ++I+ Y Q N    A   F  M   GIQ 
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQS 514

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +   S  S  A +      R +H      G + ED+ IGNA+V +YA+ G I  A   
Sbjct: 515 DNIGFSSAISACAGIQALNQGRQIHAQSYVSG-YSEDLSIGNALVSLYARCGRIKEAYLE 573

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  KD ISWN LI+G+AQ+G   +A++VF  M    ++  +  T+ S + A +++  
Sbjct: 574 FEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRA-KLEASFFTFGSAVSAAANIAN 632

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHA +IK     D+ V+  L+  Y KCG I+DA   F ++P  + V WNA+I+ 
Sbjct: 633 IKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITG 692

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  HG G++A+N F +M   G  P+H+TFV +L+ACSH GLV++G  YF  M +E G+ P
Sbjct: 693 YSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVP 752

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C+VDL  RAG L  A  FI+ MP+ PDA+IW  LL AC +H N+E+G  A+  L
Sbjct: 753 KPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHL 812

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++ E+   YVL+SN+YA  GKW+  D+ R + R+RG+KK PG S IEV N V  FY G
Sbjct: 813 LELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVG 872

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  +KIY+ L  L  K   +GY  D+  +L DVE+++K+  +  HSE+LAI FG++
Sbjct: 873 DRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLL 932

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S     PI + KNLRVC DCH+W KF+S+I+ R IIVRD+ RFHHF+ GICSC DYW
Sbjct: 933 SLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 184/657 (28%), Positives = 317/657 (48%), Gaps = 17/657 (2%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL  +   L   K+LH  ++  G         KLV+ Y  LGDL      F+ +  R+V 
Sbjct: 18  DLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVR 77

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHC 167
           +W+ +IS ++   ++S  V   +   +   + P   +F  VL+AC     G    ++IH 
Sbjct: 78  SWDKIISGFME-KKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHA 136

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            ++  G      ++  L+ +Y + GL   ARK+FD++  +DS SW AMISG+ Q+G   E
Sbjct: 137 RIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEE 196

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A+ +  EM   G+   P   +S+L  C +      G  +H  + K+G     +V N L+ 
Sbjct: 197 AIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVT 256

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           +Y++      A +VF +M  +D VS+NS+I+   Q      A   FT M++  ++PD +T
Sbjct: 257 LYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           + SL S  A          +H ++++ G    D+I+  A++D+Y     I +A  +F   
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAG-ISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             ++V+ WN ++  + +    SE+  +F+ M +   + PNQ TY SIL   + VGAL  G
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQM-QIKGLIPNQFTYPSILRTCTSVGALDLG 434

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            +IH +VIK    F+V+V + L+DMY K G++D A  +   +     V W A+IS +  H
Sbjct: 435 EQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQH 494

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
               +AL  F++ML+ G++ D+I F S ++AC+    +++G R  H      G    L  
Sbjct: 495 NLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-RQIHAQSYVSGYSEDLSI 553

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
              +V L+ R G +  A+   + +  + D+  W  L+      G  E       ++    
Sbjct: 554 GNALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLISGFAQSGYCEDALKVFAQMNRAK 612

Query: 648 SENVGYYVLMSNI--YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
            E   ++   S +   AN+   +   ++ ++   RG       S IEV+N +  FY 
Sbjct: 613 LE-ASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFD-----SDIEVSNALITFYA 663



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 184/393 (46%), Gaps = 5/393 (1%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M   G+  +  T   +L +C  S +++    +H  I+K G      + N L+++Y   G 
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTS 353
           +   ++VF+ M  R V SW+ II+ + +          F+ M +  + P  ++  S L +
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
                   R +  +H  I+  G  +   II N ++ +YAK G+I SA  VF+ L  KD +
Sbjct: 121 CSGHRIGIRYAEQIHARIICHG-LLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW  +I+G++QNG   EAI +F  M     I P    + S+L   + +     G ++HA 
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAG-IFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           V K     + +V   LV +Y +      A  +F ++     V +N++IS     G  D A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L  F +M  + ++PD +T  SLL+AC+ +G + +G++  H    + GI   +   G ++D
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ-LHSYVIKAGISSDMIVEGALLD 357

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           L+     +  AH          +  +W  +L A
Sbjct: 358 LYVNCSDIKTAHEMFLTAQTE-NVVLWNVMLVA 389


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/722 (40%), Positives = 432/722 (59%), Gaps = 5/722 (0%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRN 158
           FD +       WN +++   + G  S ++  F +  ++SG+  D YTF  V K+    R+
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRS 59

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           +  G+++H  +LK GF     V  SL+  Y +    + ARK+FD+M  RD  SWN++I+G
Sbjct: 60  VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y  +G A + L +  +M + G+ +D  T+ S+   CA S  I  G  +H   VK      
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
               N L++MY+K G +  A  VF +M +R VVS+ S+IA Y +      A   F  M++
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            GI PD+ T+ ++ +  A+       + VH +I        D+ + NA++DMYAK G + 
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF-DIFVSNALMDMYAKCGSMQ 298

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  + VKD+ISWNT+I GY++N  A+EA+ +F ++ E    +P++ T   +LPA 
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + + A  +G +IH  +++N    D  VA  LVDMY KCG +  A  LF  +     V W 
Sbjct: 359 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 418

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +I+ +G+HG G +A+  F QM   G+  D I+FVSLL ACSHSGLV EG R+F++M+ E
Sbjct: 419 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 478

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
             I+P ++HY C+VD+  R G L  A+ FI+NMP+ PDA+IWGALL  CRIH +++L   
Sbjct: 479 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 538

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            ++++FE++ EN GYYVLM+NIYA   KWE V  +R     RGL+K PG S IE+  +V+
Sbjct: 539 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 598

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
           IF  G+ ++P+ E I   LR + A+M   GY P   + L D EE EKE  L  HSE+LA+
Sbjct: 599 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 658

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           A GIISS     I++ KNLRVCGDCH   KF+S++T REI++RDSNRFH FKDG CSC  
Sbjct: 659 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 718

Query: 819 YW 820
           +W
Sbjct: 719 FW 720



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 282/553 (50%), Gaps = 19/553 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F S   +H  ++LH  ++ SG  +       LV FY     +  +R  FD ++ R+V +W
Sbjct: 54  FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 113

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           NS+I+ YV  G   + +  F Q  L SG+  D  T   V   C   R +  G+ +H   +
Sbjct: 114 NSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 172

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K  F  +     +LL MY + G  + A+ +F +M  R   S+ +MI+GY + G A EA+ 
Sbjct: 173 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 232

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + +EM  EG+S D  TV ++L  CAR   +  G  +H +I ++ L F++FVSN L++MYA
Sbjct: 233 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 292

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAGIQPDLLTLV 349
           K G M+ A  VF +M  +D++SWN+II  Y ++     A   F   +++    PD  T+ 
Sbjct: 293 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 352

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            +    A L+     R +HG+IMR G+F  D  + N++VDMYAK G +  A  +F+ +  
Sbjct: 353 CVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIAS 411

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD++SW  +I GY  +G   EAI +F  M +   I  ++ ++VS+L A SH G + +G +
Sbjct: 412 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWR 470

Query: 470 IHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
               +   C +   V    C+VDM  + G +  A      +P    +  W A++    IH
Sbjct: 471 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 530

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM--MQEEFGIKPHL 585
                A     ++ +  + P++  +  L+     + + +E +++  +  +++  G +   
Sbjct: 531 HDVKLAEKVAEKVFE--LEPENTGYYVLM-----ANIYAEAEKWEQVKRLRKRIGQRGLR 583

Query: 586 KHYGC-MVDLFGR 597
           K+ GC  +++ GR
Sbjct: 584 KNPGCSWIEIKGR 596


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 327/869 (37%), Positives = 493/869 (56%), Gaps = 86/869 (9%)

Query: 17  LPLLQAHRPL-------FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHAL 69
           LP L+   PL       FS A+++  ++               LF  C  L   +  H  
Sbjct: 24  LPRLKPKPPLLFLTTFFFSTASSTTDLT-------------STLFHQCKSLASAELTHQQ 70

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGD----LSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           L+V G        T +++ Y         LS  R    H S   V+ WN +I   V  G 
Sbjct: 71  LLVQG---LPHDPTHIISMYLTFNSPAKALSVLRRL--HPSSHTVFWWNQLIRRSVHLGF 125

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
           L + +   Y+     G RPD YTFP VLKAC  +     G  +H  V   GFEW+VFV  
Sbjct: 126 LEDVLQ-LYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 184

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSG---SWNAMISGYCQSGNAVEALDILDEMRLE- 238
            L+ MY R G    AR++FD+M  R  G   SWN++++ Y Q G+++ A+ + + M  + 
Sbjct: 185 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 244

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G+  D +++ ++LP CA       G  +H Y ++ GL  ++FV N +++MYAK GMM  A
Sbjct: 245 GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEA 304

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-------------------- 338
            +VF++M  +DVVSWN+++  Y Q      A G F  +++                    
Sbjct: 305 NKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQR 364

Query: 339 ---------------AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM----- 378
                           G +P+++TLVSL S  A      + +  H   ++  W +     
Sbjct: 365 GLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIK--WILNLDEN 422

Query: 379 ---EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD--VISWNTLITGYAQNGLASEAIE 433
              +D+++ NA++DMY+K     +A A+F+ +P KD  V++W  LI G AQ+G A+EA+E
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482

Query: 434 VF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVD 491
           +F QM++  N + PN  T    L A + +GALR G +IHA V++N      +FVA CL+D
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY K G +D A  +F  + + + V W ++++ +G+HG+G++AL  F +M    + PD +T
Sbjct: 543 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVT 602

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           FV +L ACSHSG+V +G  YF+ M ++FG+ P  +HY CMVDL  RAG L  A   I+ M
Sbjct: 603 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 662

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P++P  ++W ALL ACR++ N+ELG  A+++L E++S N G Y L+SNIYAN   W+ V 
Sbjct: 663 PMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVA 722

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +R L ++ G+KK PG S ++       F+ G+ +HP  ++IYD LR+L  ++K+LGYVP
Sbjct: 723 RIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVP 782

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D  F L DV+++EK  +L+ HSE+LA+A+GI+++ P +PI+I KNLR CGDCH+   +IS
Sbjct: 783 DNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYIS 842

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I E EIIVRDS+RFHHFK+G CSC  YW
Sbjct: 843 IIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/698 (42%), Positives = 424/698 (60%), Gaps = 6/698 (0%)

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
           LSEA+       L  GL  D + +  VLK C   ++L+  K++H  ++K   E +  V  
Sbjct: 9   LSEAIVVLMN-RLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMN 67

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +LLH+Y   G    AR +FD +  +   SWNAMI+GY +  +A +A+ +  EM  EGV  
Sbjct: 68  NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQP 127

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           +  T   IL  CA    +  G  +H  I   GLE ++ V   L+ MY K G +  A R+F
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D +M  D++SW  +I AY QS +   A+     M+Q G +P+ +T VS+ +  A     +
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             + VH   +  G  + DV +G A+V MYAK G I+ A  VF+ + V+DV+SWN +I  +
Sbjct: 248 WVKRVHRHALDAGLEL-DVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           A++G   EA ++F  M+      P+   ++SIL A +  GAL    KIH   + + L  D
Sbjct: 307 AEHGRGHEAYDLFLQMQ-TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V V T LV MY K G IDDA  +F ++   + V WNA+IS    HG G  AL  FR+M  
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            GV+PD +TFV++L+ACSH+GLV EG+  +  M + +GI+P + H  CMVDL GRAG L 
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A  FI NM V PD + WGALLG+CR +GN+ELG + +    ++D +N   YVL+SNIYA
Sbjct: 486 EAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYA 545

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             GKW+ V  VR++ R+RG++K PG S IEV+NK+  F   + +HP+ ++I +    +  
Sbjct: 546 EAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIE 605

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           K+K+ GY+PD   VL++    +KE  + SHSE+LAI +G++ +PP +PI++FKNLRVC D
Sbjct: 606 KIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTD 665

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH  TK IS++  REIIVRD+NRFHHFKDG+CSCGDYW
Sbjct: 666 CHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 152/460 (33%), Positives = 246/460 (53%), Gaps = 10/460 (2%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           + ++ + C K   L   K++H  ++ S   +       L++ Y   G L  +R  FD + 
Sbjct: 31  YVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALV 90

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            ++  +WN+MI+ YV      +A+  F +     G++P+  T+  +LKAC +L     GK
Sbjct: 91  KKSGASWNAMIAGYVEHKHAEDAMRLFREMC-HEGVQPNAGTYMIILKACASLSALKWGK 149

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  +   G E DV V  +LL MY + G  N AR++FD++   D  SW  MI  Y QSG
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           N  EA  ++ +M  EG   + IT  SIL  CA    +     +H + +  GLE ++ V  
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+ MYAK G +  A  VFD+M  RDVVSWN +I A+ +      A+  F  MQ  G +P
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +  +S+ +  A        + +H   +  G    DV +G A+V MY+K G I+ A  V
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSG-LEVDVRVGTALVHMYSKSGSIDDARVV 388

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ + V++V+SWN +I+G AQ+GL  +A+EVF+ M   + + P++ T+V++L A SH G 
Sbjct: 389 FDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM-TAHGVKPDRVTFVAVLSACSHAGL 447

Query: 464 LRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDA 502
           + +G   +  + +   +  DV    C+VD+ G+ GR+ +A
Sbjct: 448 VDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA 487



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 200/419 (47%), Gaps = 14/419 (3%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + ++C  L  +K    +HA +   G    V   T L+  Y   G ++ +R  FD++   +
Sbjct: 135 ILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHD 194

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           + +W  MI  Y + G   EA     Q     G +P+  T+  +L AC +   L   K++H
Sbjct: 195 IISWTVMIGAYAQSGNGKEAYRLMLQME-QEGFKPNAITYVSILNACASEGALKWVKRVH 253

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              L  G E DV V  +L+ MY + G  + AR +FD M VRD  SWN MI  + + G   
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA D+  +M+ EG   D I   SIL  CA +  +     IH + +  GLE ++ V   L+
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MY+K G +  A  VFD+M  R+VVSWN++I+   Q      A   F  M   G++PD +
Sbjct: 374 HMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRV 433

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T V++ S  +        RS +  + +      DV   N +VD+  + G +  A    + 
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDN 493

Query: 407 LPVK-DVISWNTLITGYAQNGLASEAIEVFQMM-EECNEINP-NQGTYVSILPAYSHVG 462
           + V  D  +W  L+      G     +E+ +++ +E  +++P N  TYV +   Y+  G
Sbjct: 494 MAVDPDEATWGALLGSCRTYG----NVELGELVAKERLKLDPKNAATYVLLSNIYAEAG 548



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 9/280 (3%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I +  +  +C     L  VKR+H   + +G    V   T LV  YA  G +  +R  FD 
Sbjct: 231 ITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDR 290

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVD 161
           +  R+V +WN MI  +   GR  EA D F Q   T G +PD   F  +L AC +   L  
Sbjct: 291 MKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ-TEGCKPDAIMFLSILNACASAGALEW 349

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            KKIH   L  G E DV V  +L+HMY + G  + AR +FD M VR+  SWNAMISG  Q
Sbjct: 350 VKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQ 409

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLF 280
            G   +AL++   M   GV  D +T  ++L  C+ +  +  G   +L + + +G+E ++ 
Sbjct: 410 HGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVS 469

Query: 281 VSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             N ++++  + G +  A    D M ++ D  +W +++ +
Sbjct: 470 HCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGS 509


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 306/810 (37%), Positives = 473/810 (58%), Gaps = 33/810 (4%)

Query: 34  LQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFY 89
           L I PD          F  L ++   L  +   K++HA +   G  + +V  +  LVN Y
Sbjct: 87  LGIKPD-------NFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLY 139

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTF 149
              GD       FD IS RN  +WNS+IS      +   A++ F +  L   + P  +T 
Sbjct: 140 RKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDEDVEPSSFTL 198

Query: 150 PPVLKACRN------LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
             V  AC N      L+ GK++H   L+ G E + F+  +L+ MY + G    ++ L   
Sbjct: 199 VSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGS 257

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
              RD  +WN ++S  CQ+   +EAL+ L EM LEGV  D  T++S+LP C+  + + +G
Sbjct: 258 FEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTG 317

Query: 264 LLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
             +H Y +K+G L+ N FV + L++MY     +    RVFD M +R +  WN++I  Y Q
Sbjct: 318 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQ 377

Query: 323 SNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +     A   F  M++ AG+  +  T+  +     +        ++HGF+++RG    D 
Sbjct: 378 NEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRG-LDRDR 436

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME-- 439
            + NA++DMY++LG I+ A  +F  +  +D+++WNT+ITGY  +    +A+ +   M+  
Sbjct: 437 FVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQIL 496

Query: 440 --ECNE------INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
             + +E      + PN  T ++ILP+ + + AL +G +IHA  IKN L  DV V + LVD
Sbjct: 497 ERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 556

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KCG +  +  +F Q+P  + + WN I+  +G+HG    A++  R M+ +GV+P+ +T
Sbjct: 557 MYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVT 616

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F+S+  ACSHSG+V+EG + F+ M++++G++P   HY C+VDL GRAG +  A+  I  +
Sbjct: 617 FISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLI 676

Query: 612 PVRPD-ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           P   D A  W +LLGACRIH N+E+G +A+  L +++     +YVL++NIY++ G W   
Sbjct: 677 PRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKA 736

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            EVR   + +G++K PG S IE  ++V  F  G+ +HP+ EK+   L  L  +M+  GY+
Sbjct: 737 TEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYI 796

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           PD S VL +VEEDEKE +L  HSE+LAIAFGI+++ P + I++ KNLRVC DCH  TKFI
Sbjct: 797 PDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFI 856

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S++ +REII+RD  RFHHFK+G CSCGDYW
Sbjct: 857 SKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 269/540 (49%), Gaps = 22/540 (4%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           W  ++   VR   L EAV  +    +  G++PD + FP +LKA  +L D   GK+IH  V
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVL-GIKPDNFAFPALLKAVADLQDMDLGKQIHAHV 119

Query: 170 LKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            K G+  D V VA +L+++Y + G      K+FD +  R+  SWN++IS  C       A
Sbjct: 120 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 179

Query: 229 LDILDEMRLEGVSMDPITVASILPVCAR---SDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           L+    M  E V     T+ S+   C+     + +L G  +H Y ++ G E N F+ N L
Sbjct: 180 LEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTL 238

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + MY K G +  +  +      RD+V+WN+++++  Q+   + A  +   M   G++PD 
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ S+    + L   R  + +H + ++ G   E+  +G+A+VDMY     + S C VF+
Sbjct: 299 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFD 358

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           G+  + +  WN +ITGYAQN    EA+ +F  MEE   +  N  T   ++PA    GA  
Sbjct: 359 GMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFS 418

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +   IH  V+K  L  D FV   L+DMY + G+ID A  +F ++     V WN II+ + 
Sbjct: 419 KKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478

Query: 526 IHGQGDKALNFFRQM--LDE---------GVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
              + + AL    +M  L+           ++P+ IT +++L +C+    +++G+   H 
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE-IHA 537

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
              +  +   +     +VD++ + G L M+      +P+R +   W  ++ A  +HGN +
Sbjct: 538 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQ 596


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 283/746 (37%), Positives = 453/746 (60%), Gaps = 9/746 (1%)

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           ++T+L  ++ +  ++  +RH FD I   +V  WN MI  Y   G   +++   Y   L  
Sbjct: 43  AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSI-YLYLHMLQL 101

Query: 141 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G+ P  +TFP +LKAC +L     G+ IH     LG   D++V+ +LLHMY + G    A
Sbjct: 102 GVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQA 161

Query: 198 RKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           + LF+ +    RD  +WNAMI+ +       + +  + +M+  GV+ +  T+ SILP   
Sbjct: 162 QTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIG 221

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +++ +  G  IH Y +++    N+ +   L++MYAK  ++ +A ++F+ + +++ V W++
Sbjct: 222 QANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSA 281

Query: 316 IIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +I  Y   +    A   +  M    G+ P   TL ++    AQL D +  + +H  +++ 
Sbjct: 282 MIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS 341

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G  + D  +GN+++ MYAK GI+++A    + +  KD +S++ +I+G  QNG A +A+ +
Sbjct: 342 GMDL-DTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLI 400

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F+ M+  + I P   T +++LPA SH+ AL+ G   H   +      D  +   ++DMY 
Sbjct: 401 FRQMQS-SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYS 459

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           KCG+I  +  +F ++     + WN +I  +GIHG   +AL+ F+++   G++PD +T ++
Sbjct: 460 KCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIA 519

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +L+ACSHSGLV+EG+ +F  M + F IKP + HY CMVDL  RAG+L  A+ FIQ MP  
Sbjct: 520 VLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFV 579

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P+  IWGALL ACR H N+E+G   S ++  +  E  G +VLMSNIY++VG+W+    +R
Sbjct: 580 PNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIR 639

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
           S+ R  G KK+PG S +E++  + +F  G+++HP+   I  +L+ L  +MK LGY  D S
Sbjct: 640 SIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSS 699

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
           FVL DVEE+EKE IL  HSE++AIAFGI+++ P S I + KNLR+C DCH+  KFI+ +T
Sbjct: 700 FVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLT 759

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
           EREI VRD++RFHHFKDGIC+C D+W
Sbjct: 760 EREITVRDASRFHHFKDGICNCQDFW 785



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 193/396 (48%), Gaps = 30/396 (7%)

Query: 43  NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           N S  +           LH  K +HA  + +     V   T L++ YA    L ++R  F
Sbjct: 209 NSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIF 268

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD- 161
           + ++ +N   W++MI  YV    +S+A+  +       GL P   T   +L+AC  L D 
Sbjct: 269 NTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDL 328

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             GKK+HC ++K G + D  V  SL+ MY + G+ + A    D+M  +D+ S++A+ISG 
Sbjct: 329 KRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGC 388

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q+G A +AL I  +M+  G++    T+ ++LP C+    +  G   H Y V  G   + 
Sbjct: 389 VQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDT 448

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            + N +I+MY+K G +  +  +FD+M  RD++SWN++I  Y      + A   F  +Q  
Sbjct: 449 SICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQAL 508

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-RGWF------------MEDVIIGNA 386
           G++PD +TL+++      L+ C +S    G +   + WF            M   I    
Sbjct: 509 GLKPDDVTLIAV------LSACSHS----GLVTEGKYWFSSMSQNFNIKPRMAHYI---C 555

Query: 387 VVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITG 421
           +VD+ A+ G ++ A    + +P V +V  W  L+  
Sbjct: 556 MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 307/750 (40%), Positives = 442/750 (58%), Gaps = 29/750 (3%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC-FYQFTLTSGLRPDFYTFPP 151
           G LS + H FD I   +V T+N +I  Y      + A     Y+  L   + P+ YTFP 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
            LKAC  L D   G+ IH   +  G + D+FV+ +LL MY +      A  +F  MP RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLI 266
             +WNAM++GY   G    A+  L  M+++   + P   T+ ++LP+ A+   +  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 267 HLYIVKHGLEFN----------LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           H Y ++  L  N          + +   L++MYAK G + +A RVFD M  R+ V+W+++
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC------RNSRSVHGF 370
           I  +   +    A   F  M   G     L  +S TSI + L  C      R    +H  
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           + + G    D+  GN+++ MYAK G+I+ A A+F+ + VKD +S++ L++GY QNG A E
Sbjct: 366 LAKSG-VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEE 424

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A  VF+ M+ CN + P+  T VS++PA SH+ AL+ G   H  VI   L  +  +   L+
Sbjct: 425 AFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMY KCGRID +  +F  +P    V WN +I+ +GIHG G +A   F +M + G  PD +
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TF+ LL+ACSHSGLV EG+ +FH+M+  +G+ P ++HY CMVDL  R G L  A+ FIQ+
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP+R D  +W ALLGACR++ N++LG   S  + E+  E  G +VL+SNIY+  G+++  
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            EVR + + +G KK+PG S IE+N  +  F  G+++HP+  +IY EL N+   +K LGY 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           PD SFVLQD+EE+EKE  L  HSE+LAIA+GI+S      I + KNLRVCGDCH   K I
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S +  R IIVRD+NRFHHFK+G CSCGD+W
Sbjct: 784 SLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 269/570 (47%), Gaps = 29/570 (5%)

Query: 1   MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENE--SREIDFDDLFQSCT 58
           +F   PS   R    L+    +  P  +AAA+ L +    L +        F    ++C+
Sbjct: 79  LFDQIPSPDVRTYNDLIRAYSSSSP--TAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136

Query: 59  KL--HHVKR-LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
            L  HH  R +H   + +G    +F ST L++ Y     L  + H F  +  R++  WN+
Sbjct: 137 ALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196

Query: 116 MISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFP---PVLKACRNLVDGKKIHCSVLK 171
           M++ Y   G    AV       +    LRP+  T     P+L     L  G  +H   ++
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIR 256

Query: 172 LGFEWD----------VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
                +          V +  +LL MY + G    AR++FD MP R+  +W+A+I G+  
Sbjct: 257 ACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316

Query: 222 SGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
                +A  +   M  +G+  + P ++AS L  CA  D++  G  +H  + K G+  +L 
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
             N+L++MYAK G++  A+ +FD+M  +D VS++++++ Y Q+     A   F  MQ   
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 436

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++PD  T+VSL    + L   ++ R  HG ++ RG   E  I  NA++DMYAK G I+ +
Sbjct: 437 VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC-NALIDMYAKCGRIDLS 495

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +P +D++SWNT+I GY  +GL  EA  +F  M       P+  T++ +L A SH
Sbjct: 496 RQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFICLLSACSH 554

Query: 461 VGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
            G + +G    H       L   +    C+VD+  + G +D+A      +P R+    W 
Sbjct: 555 SGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614

Query: 519 AIISCHGIHGQ---GDKALNFFRQMLDEGV 545
           A++    ++     G K     +++  EG 
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGT 644



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 207/423 (48%), Gaps = 40/423 (9%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V   T L++ YA  G L ++R  FD +  RN  TW+++I  +V C R+++A    ++  L
Sbjct: 273 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAF-LLFKAML 331

Query: 139 TSG---LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             G   L P   +    L+AC +L     G+++H  + K G   D+    SLL MY + G
Sbjct: 332 AQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 389

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           L + A  LFD+M V+D+ S++A++SGY Q+G A EA  +  +M+   V  D  T+ S++P
Sbjct: 390 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+    +  G   H  ++  GL     + N LI+MYAK G +  + +VF+ M  RD+VS
Sbjct: 450 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 509

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV----H 368
           WN++IA Y        A   F  M   G  PD +T + L      L+ C +S  V    H
Sbjct: 510 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL------LSACSHSGLVIEGKH 563

Query: 369 GF-IMRRGW----FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG- 421
            F +MR G+     ME  I    +VD+ ++ G ++ A    + +P++ DV  W  L+   
Sbjct: 564 WFHVMRHGYGLTPRMEHYI---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 620

Query: 422 --YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
             Y    L  +   + Q      E+ P   G +V +   YS  G   +  ++  R+I+  
Sbjct: 621 RVYKNIDLGKKVSRMIQ------ELGPEGTGNFVLLSNIYSAAGRFDEAAEV--RIIQKV 672

Query: 479 LCF 481
             F
Sbjct: 673 QGF 675


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 326/867 (37%), Positives = 483/867 (55%), Gaps = 76/867 (8%)

Query: 11  RRLCKLLPLLQAHR----PLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRL 66
           RRL  L    ++H+     LFS +A  L+I+P                  C  +  VK +
Sbjct: 3   RRLVTLRAAAKSHQHLKVSLFSTSA--LEITPP-------------FIHKCKTISQVKLI 47

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRCG 124
           H  L+  G I T+  ++ L++ Y +LG LS +         S   VY WNS+I  Y   G
Sbjct: 48  HQKLLSFG-ILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNG 106

Query: 125 RLSEAVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
           R   A  C   F L   L   PD YTFP V KAC  +     G   H      GF  +VF
Sbjct: 107 R---ANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVF 163

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
           V  +L+ MY R G  + ARK+FD+MPV D  SWN++I  Y + G    AL++  +M  E 
Sbjct: 164 VGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEF 223

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G   D IT+ ++LP CA       G   H + V   +  N+FV N L++MYAKFGMM  A
Sbjct: 224 GFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEA 283

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-------------------- 338
             VF  M  +DVVSWN+++A Y Q      A   F  MQ+                    
Sbjct: 284 NTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQR 343

Query: 339 ---------------AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI------MRRGWF 377
                          +GI+P+ +TL+S+ S  A +    + + +H +       +R+   
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGH 403

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVF 435
            ++ ++ N ++DMYAK   ++ A A+F+ L  K  DV++W  +I GY+Q+G A++A+E+ 
Sbjct: 404 GDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463

Query: 436 -QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMY 493
            +M EE  +  PN  T    L A + + AL  G +IHA  ++N      +FV+ CL+DMY
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I DA  +F  +   + V W ++++ +G+HG G++AL  F +M   G + D +T +
Sbjct: 524 AKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLL 583

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L ACSHSG++ +G  YF+ M+ +FG+ P  +HY C+VDL GRAG L  A   I+ MP+
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P   +W ALL  CRIHG +ELG  A+ ++ E+ S N G Y L+SN+YAN G+W+ V  +
Sbjct: 644 EPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRI 703

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           RSL R +G+KK PG S +E       F+ G++THP  ++IY  L +   ++K +GYVP+ 
Sbjct: 704 RSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPET 763

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
            F L DV+++EK+ +L  HSE+LA+A+GI+++P  + I+I KNLRVCGDCH    ++S+I
Sbjct: 764 GFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRI 823

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            + EII+RDS+RFHHFK+G+CSC  YW
Sbjct: 824 IDHEIILRDSSRFHHFKNGLCSCKGYW 850


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 274/618 (44%), Positives = 418/618 (67%), Gaps = 9/618 (1%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SWN++I+   +SG++VEAL     MR   +  +  T    +  C+   ++ SG   H   
Sbjct: 119 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 178

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  G E +LFVS+ L++MY+K G +R A  +FD++  R++VSW S+I  Y Q++D   A 
Sbjct: 179 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 238

Query: 331 GFFTT--MQQAGIQPD------LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
             F    ++++G + D       + +VS+ S  +++++   +  VHGF+++RG F  D+ 
Sbjct: 239 LLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG-FEGDLG 297

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + N ++D YAK G +  +  VF+G+  +DVISWN++I  YAQNG+++E++E+F  M +  
Sbjct: 298 VENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDG 357

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           EIN N  T  ++L A +H G+ R G  IH +VIK  L  +VFV T ++DMY KCG+++ A
Sbjct: 358 EINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMA 417

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
              F ++   +   W+A+++ +G+HG   +AL  F +M   GV+P++ITFVS+L ACSH+
Sbjct: 418 RKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHA 477

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GL+ EG  +F  M  EF ++P ++HYGCMVDL GRAG+L  A + I+ M +RPD  +WGA
Sbjct: 478 GLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGA 537

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LLGACR+H N++LG +++ +LFE+D +N GYYVL+SNIYA+ G+WE V+ +R L ++ GL
Sbjct: 538 LLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGL 597

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
            K PG+S +++  +V +F  G+R HP++EKIY+ L  L+ K++ +GYVPD + VL DV  
Sbjct: 598 VKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGH 657

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
           +EKE +L  HSE+LA+AFGI+++ P + I I KNLRVCGDCH   KFIS+I +REI+VRD
Sbjct: 658 EEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRD 717

Query: 803 SNRFHHFKDGICSCGDYW 820
           S RFHHF+DG+CSCGDYW
Sbjct: 718 SKRFHHFRDGLCSCGDYW 735



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/500 (32%), Positives = 260/500 (52%), Gaps = 30/500 (6%)

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
           ++   NV++WNS+I+   R G   EA+  F      S L+P+  TFP  +K+C  L+D  
Sbjct: 111 YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKSCSALLDLH 169

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++ H   L  GFE D+FV+++L+ MY + G    AR LFD++  R+  SW +MI+GY 
Sbjct: 170 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 229

Query: 221 QSGNAVEALDILDEMRLE--------GVSMDPITVASILPVCAR--SDNILSGLLIHLYI 270
           Q+ +A  AL +  E  +E         V +DPI + S+L  C+R    +I  G  +H ++
Sbjct: 230 QNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFL 287

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +K G E +L V N L++ YAK G +  + RVFD M ERDV+SWNSIIA Y Q+     + 
Sbjct: 288 IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347

Query: 331 GFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
             F  M + G I  + +TL ++    A     R  + +H  +++ G    +V +G +++D
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG-LESNVFVGTSIID 406

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MY K G +  A   F+ +  K+V SW+ ++ GY  +G A EA+EVF  M     + PN  
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG-VKPNYI 465

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVDMYGKCGRIDDAMSL 505
           T+VS+L A SH G L +G      +      FDV        C+VD+ G+ G + +A  L
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMSHE---FDVEPGVEHYGCMVDLLGRAGYLKEAFDL 522

Query: 506 FYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC-SHSG 563
              +  R   V W A++    +H   D      R++ +  + P +  +  LL+   + +G
Sbjct: 523 IKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE--LDPKNCGYYVLLSNIYADAG 580

Query: 564 LVSEGQRYFHMMQEEFGIKP 583
              + +R   +M+    +KP
Sbjct: 581 RWEDVERMRILMKNSGLVKP 600



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 203/391 (51%), Gaps = 37/391 (9%)

Query: 55  QSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           +SC+ L   H  ++ H   ++ G    +F S+ LV+ Y+  G+L  +R  FD IS+RN+ 
Sbjct: 160 KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIV 219

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTL-TSGLRPDF------YTFPPVLKACRNLVDG-- 162
           +W SMI+ YV+      A+  F +F +  SG   D            VL AC  + +   
Sbjct: 220 SWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSI 279

Query: 163 -KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            + +H  ++K GFE D+ V  +L+  Y + G   V+R++FD M  RD  SWN++I+ Y Q
Sbjct: 280 TEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQ 339

Query: 222 SGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           +G + E+++I   M  +G ++ + +T++++L  CA S +   G  IH  ++K GLE N+F
Sbjct: 340 NGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVF 399

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  ++I+MY K G +  A + FD+M E++V SW++++A Y        A   F  M  AG
Sbjct: 400 VGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG 459

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM-------EDVIIG----NAVVD 389
           ++P+ +T VS+ +  +           H  ++  GW          DV  G      +VD
Sbjct: 460 VKPNYITFVSVLAACS-----------HAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVD 508

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
           +  + G +  A  + +G+ ++ D + W  L+
Sbjct: 509 LLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 141/263 (53%), Gaps = 13/263 (4%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  L+  G    +     L++ YA  G+L  SR  FD ++ R+V +WNS+I+VY + G 
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
            +E+++ F++      +  +  T   VL AC +      GK IH  V+K+G E +VFV  
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           S++ MYC+ G   +ARK FD M  ++  SW+AM++GY   G+A EAL++  EM + GV  
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462

Query: 243 DPITVASILPVCARSDNILSG-----LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
           + IT  S+L  C+ +  +  G      + H + V+ G+E        ++++  + G ++ 
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH----YGCMVDLLGRAGYLKE 518

Query: 298 ALRVFDQMMER-DVVSWNSIIAA 319
           A  +   M  R D V W +++ A
Sbjct: 519 AFDLIKGMKLRPDFVVWGALLGA 541


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 307/750 (40%), Positives = 441/750 (58%), Gaps = 29/750 (3%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC-FYQFTLTSGLRPDFYTFPP 151
           G LS + H FD I   +V T+N +I  Y      + A     Y+  L   + P+ YTFP 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
            LKAC  L D   G+ IH   +  G + D+FV+ +LL MY +      A  +F  MP RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLI 266
             +WNAM++GY   G    A+  L  M+++   + P   T+ ++LP+ A+   +  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 267 HLYIVKHGLEFN----------LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           H Y ++  L  N          + +   L++MYAK G + +A RVFD M  R+ V+W+++
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC------RNSRSVHGF 370
           I  +   +    A   F  M   G     L  +S TSI + L  C      R    +H  
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHLRMGEQLHAL 365

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           + + G    D+  GN+++ MYAK G+I+ A A+F+ + VKD +S++ L++GY QNG A E
Sbjct: 366 LAKSG-VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEE 424

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A  VF+ M+ CN + P+  T VS++PA SH+ AL+ G   H  VI   L  +  +   L+
Sbjct: 425 AFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMY KCGRID +  +F  +P    V WN +I+ +GIHG G +A   F +M + G  PD +
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TF+ LL+ACSHSGLV EG+ +FH+M   +G+ P ++HY CMVDL  R G L  A+ FIQ+
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP+R D  +W ALLGACR++ N++LG   S  + E+  E  G +VL+SNIY+  G+++  
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            EVR + + +G KK+PG S IE+N  +  F  G+++HP+  +IY EL N+   +K LGY 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           PD SFVLQD+EE+EKE  L  HSE+LAIA+GI+S      I + KNLRVCGDCH   K I
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S +  R IIVRD+NRFHHFK+G CSCGD+W
Sbjct: 784 SLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 269/570 (47%), Gaps = 29/570 (5%)

Query: 1   MFRLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENE--SREIDFDDLFQSCT 58
           +F   PS   R    L+    +  P  +AAA+ L +    L +        F    ++C+
Sbjct: 79  LFDQIPSPDVRTYNDLIRAYSSSSP--TAAADGLHLYRRMLRHRVAPNNYTFPFALKACS 136

Query: 59  KL--HHVKR-LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
            L  HH  R +H   + +G    +F ST L++ Y     L  + H F  +  R++  WN+
Sbjct: 137 ALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196

Query: 116 MISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFP---PVLKACRNLVDGKKIHCSVLK 171
           M++ Y   G    AV       +    LRP+  T     P+L     L  G  +H   ++
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 256

Query: 172 LGFEWD----------VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
                +          V +  +LL MY + G    AR++FD MP R+  +W+A+I G+  
Sbjct: 257 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316

Query: 222 SGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
                +A  +   M  +G+  + P ++AS L  CA  D++  G  +H  + K G+  +L 
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
             N+L++MYAK G++  A+ +FD+M  +D VS++++++ Y Q+     A   F  MQ   
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 436

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++PD  T+VSL    + L   ++ R  HG ++ RG   E  I  NA++DMYAK G I+ +
Sbjct: 437 VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC-NALIDMYAKCGRIDLS 495

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +P +D++SWNT+I GY  +GL  EA  +F  M       P+  T++ +L A SH
Sbjct: 496 RQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFICLLSACSH 554

Query: 461 VGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
            G + +G    H       L   +    C+VD+  + G +D+A      +P R+    W 
Sbjct: 555 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614

Query: 519 AIISCHGIHGQ---GDKALNFFRQMLDEGV 545
           A++    ++     G K     +++  EG 
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGT 644



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 204/426 (47%), Gaps = 46/426 (10%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V   T L++ YA  G L ++R  FD +  RN  TW+++I  +V C R+++A    ++  L
Sbjct: 273 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAF-LLFKAML 331

Query: 139 TSG---LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             G   L P   +    L+AC +L     G+++H  + K G   D+    SLL MY + G
Sbjct: 332 AQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 389

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           L + A  LFD+M V+D+ S++A++SGY Q+G A EA  +  +M+   V  D  T+ S++P
Sbjct: 390 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+    +  G   H  ++  GL     + N LI+MYAK G +  + +VF+ M  RD+VS
Sbjct: 450 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 509

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++IA Y        A   F  M   G  PD +T + L      L+ C +S  V   I 
Sbjct: 510 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL------LSACSHSGLV---IE 560

Query: 373 RRGWF------------MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
            + WF            ME  I    +VD+ ++ G ++ A    + +P++ DV  W  L+
Sbjct: 561 GKHWFHVMGHGYGLTPRMEHYI---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617

Query: 420 TG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARVI 475
                Y    L  +   + Q      E+ P   G +V +   YS  G   +  ++  R+I
Sbjct: 618 GACRVYKNIDLGKKVSRMIQ------ELGPEGTGNFVLLSNIYSAAGRFDEAAEV--RII 669

Query: 476 KNCLCF 481
           +    F
Sbjct: 670 QKVQGF 675


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/777 (38%), Positives = 440/777 (56%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTK--LHHVKRL-HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  +CTK  L  + RL H  +   G     F    L++ Y        +   F  + 
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDML 205

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           Y +  T+N++IS + +CG    A+  F +  L SGL PD  T   +L AC  + D   GK
Sbjct: 206 YCDSVTFNTLISGHAQCGHGDRALGIFDEMQL-SGLSPDSVTIASLLAACSAVGDLRKGK 264

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  +LK G   D  +  SLL +Y + G    A ++FD     +   WN M+  Y Q  
Sbjct: 265 QLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQID 324

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ DI   M   GV  +  T   +L  C  +  I  G  IH   +K+G + +++VS 
Sbjct: 325 DLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSG 384

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+G +  A R+ D + E+DVVSW S+IA Y Q      A   F  MQ  GI P
Sbjct: 385 VLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWP 444

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +        +H  +   G +  DV I N +V +YA+ GI   A + 
Sbjct: 445 DNIGLASAISACAGIKAVHQGSQIHARVYVSG-YSADVSIWNGLVYLYARCGISKEAFSS 503

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  K+ I+WN LI+G+AQ+GL  EA++VF  M++      N  T+VS + A +++  
Sbjct: 504 FEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA-KYNVFTFVSSISASANLAD 562

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHARVIK     +  ++  L+ +YGKCG I+DA   F+++ + + V WN II+C
Sbjct: 563 IKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITC 622

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+G +AL+ F QM  +G++P  +TFV +LTACSH GLV EG  YF  M  E GI P
Sbjct: 623 CSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHP 682

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C+VD+ GRAG L  A  F++ MP+  D+ +W  LL AC++H N+E+G  A+  L
Sbjct: 683 RPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHL 742

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA  GKW   D++R + +DRG++K PG S IEV N V  F+ G
Sbjct: 743 LELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVG 802

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  ++IY+ L +L  ++  +GY  +   +  + E++ K+     HSE+LA+AFG++
Sbjct: 803 DRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLM 862

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S P   P+++ KNLRVC DCH W KF S +  REI++RD  RFHHF +G CSCGDYW
Sbjct: 863 SLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 169/572 (29%), Positives = 288/572 (50%), Gaps = 8/572 (1%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V  +HA  ++ G          L++ YA  G +  +R  F+ +S R+  +W +++S Y +
Sbjct: 61  VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
            G   EAV   Y+    SG+ P  Y    +L AC        G+ IH  V K GF  + F
Sbjct: 121 NGLGEEAVR-LYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +L+ +Y R     +A ++F DM   DS ++N +ISG+ Q G+   AL I DEM+L G
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +S D +T+AS+L  C+   ++  G  +H Y++K G+  +  +  +L+++Y K G +  AL
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           ++FD     +VV WN ++ AY Q +D   +   F  M  AG++P+  T   +        
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           +      +H   ++ G F  D+ +   ++DMY+K G ++ A  + + +  KDV+SW ++I
Sbjct: 360 EIGLGEQIHSLTIKNG-FQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMI 418

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY Q+    EA+E F+ M+ C  I P+     S + A + + A+ QG +IHARV  +  
Sbjct: 419 AGYVQHEFCKEALETFKEMQACG-IWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGY 477

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV +   LV +Y +CG   +A S F  +     + WN +IS     G  ++AL  F +
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMK 537

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M   G + +  TFVS ++A ++   + +G++  H    + G     +    ++ L+G+ G
Sbjct: 538 MDQAGAKYNVFTFVSSISASANLADIKQGKQ-IHARVIKTGYTSETEISNALISLYGKCG 596

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +  A      M  R + S W  ++  C  HG
Sbjct: 597 SIEDAKMDFFEMTKRNEVS-WNTIITCCSQHG 627



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 235/457 (51%), Gaps = 11/457 (2%)

Query: 149 FPPVLKACRNLVDGKK------IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
           F   L+ACR    G++      IH   +  G      +   L+ +Y + G    AR++F+
Sbjct: 44  FACALRACRG--SGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFE 101

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
           ++ VRD+ SW A++SGY Q+G   EA+ +  EM   GV   P  ++SIL  C +++    
Sbjct: 102 ELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQL 161

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G LIH+ + K G     FV N LI++Y +    R A RVF  M+  D V++N++I+ + Q
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQ 221

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                 A G F  MQ +G+ PD +T+ SL +  + + D R  + +H ++++ G  + D I
Sbjct: 222 CGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSL-DYI 280

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +  +++D+Y K G I  A  +F+     +V+ WN ++  Y Q    +++ ++F  M    
Sbjct: 281 MEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAG 340

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + PN+ TY  +L   +H G +  G +IH+  IKN    D++V+  L+DMY K G +D A
Sbjct: 341 -VRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKA 399

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +   +     V W ++I+ +  H    +AL  F++M   G+ PD+I   S ++AC+  
Sbjct: 400 QRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGI 459

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
             V +G +  H      G    +  +  +V L+ R G
Sbjct: 460 KAVHQGSQ-IHARVYVSGYSADVSIWNGLVYLYARCG 495


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 296/766 (38%), Positives = 449/766 (58%), Gaps = 4/766 (0%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           ++CT   H+   HA L+ +G    + + TKL     ++G    +R  F  +   +++ +N
Sbjct: 17  KACT-FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFN 75

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF 174
            +I  +      S ++  +      + L PD +T+   + A  +   G  +H   +  GF
Sbjct: 76  VLIKGFSFSPDAS-SISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGMCLHAHAVVDGF 134

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           + ++FVA++L+ +YC+F     ARK+FD MP RD+  WN MI+G  ++    +++ +  +
Sbjct: 135 DSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKD 194

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M  +GV +D  TVA++LP  A    +  G+ I    +K G  F+ +V   LI++++K   
Sbjct: 195 MVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCED 254

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A  +F  + + D+VS+N++I+ +  + +   A  +F  +  +G +    T+V L  +
Sbjct: 255 VDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPV 314

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            +       +  + GF ++ G  ++  +   A+  +Y++L  I+ A  +F+    K V +
Sbjct: 315 SSPFGHLHLACCIQGFCVKSGTILQPSV-STALTTIYSRLNEIDLARQLFDESSEKTVAA 373

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN +I+GYAQ+GL   AI +FQ M    E  PN  T  SIL A + +GAL  G  +H  +
Sbjct: 374 WNAMISGYAQSGLTEMAISLFQEMMT-TEFTPNPVTITSILSACAQLGALSFGKSVHQLI 432

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
               L  +++V+T L+DMY KCG I +A  LF      ++V WN +I  +G+HG GD+AL
Sbjct: 433 KSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEAL 492

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +ML  G +P  +TF+S+L ACSH+GLV EG   FH M  ++ I+P  +HY CMVD+
Sbjct: 493 KLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDI 552

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A  FI+ MPV P  ++WG LLGAC IH +  L  VAS+RLFE+D  NVGYY
Sbjct: 553 LGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYY 612

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIY+    +     VR   + R L KTPG + IEVN    +F  G+R+H +   IY
Sbjct: 613 VLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIY 672

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
            +L  LT KM+ +GY  +    L DVEE+EKE +   HSE+LAIAFG+I++ P + I+I 
Sbjct: 673 AKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRII 732

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC DCH  TKFIS+ITER I+VRD+NRFHHFKDGICSCGDYW
Sbjct: 733 KNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 287/773 (37%), Positives = 455/773 (58%), Gaps = 9/773 (1%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D F+  T + H+ + HA +++ G    +   TKL    ++LG + ++R  F  +   +V+
Sbjct: 25  DFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVF 84

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
            +N ++  +        ++  F     ++ L+P+  T+   + A     D   G+ IH  
Sbjct: 85  LFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            +  G + ++ + ++++ MY +F     ARK+FD MP +D+  WN MISGY ++   VE+
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204

Query: 229 LDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           + +  ++  E  + +D  T+  ILP  A    +  G+ IH    K G   + +V    I+
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFIS 264

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           +Y+K G ++    +F +  + D+V++N++I  Y  + +   +   F  +  +G +    T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           LVSL  +   L       ++HG+ ++   F+    +  A+  +Y+KL  I SA  +F+  
Sbjct: 325 LVSLVPVSGHLMLIY---AIHGYCLKSN-FLSHASVSTALTTVYSKLNEIESARKLFDES 380

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P K + SWN +I+GY QNGL  +AI +F+ M++ +E +PN  T   IL A + +GAL  G
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLG 439

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +H  V        ++V+T L+ MY KCG I +A  LF  + + + V WN +IS +G+H
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           GQG +ALN F +ML+ G+ P  +TF+ +L ACSH+GLV EG   F+ M   +G +P +KH
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y CMVD+ GRAGHL  A  FI+ M + P +S+W  LLGACRIH +  L    S++LFE+D
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            +NVGY+VL+SNI++    +     VR  A+ R L K PG++ IE+     +F +G+++H
Sbjct: 620 PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSH 679

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ ++IY++L  L  KM+  GY P+    L DVEE+E+E ++  HSERLAIAFG+I++ P
Sbjct: 680 PQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEP 739

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + I+I KNLRVC DCH  TK IS+ITER I+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 740 GTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 288/776 (37%), Positives = 455/776 (58%), Gaps = 9/776 (1%)

Query: 49  DFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           +F DLF+  T + H+ + HA +V+ G    +   TKL    ++LG + ++R  F  +   
Sbjct: 22  NFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK---I 165
           +V+ +N ++  +        ++  F     ++ L+P+  T+   + A     D +    I
Sbjct: 82  DVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVI 141

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +  G + ++ + ++++ MY +F     ARK+FD MP +D+  WN MISGY ++   
Sbjct: 142 HGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201

Query: 226 VEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           VE++ +  ++  E  + +D  T+  ILP  A    +  G+ IH    K G   + +V   
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
            I++Y+K G ++ A  +F +    D+V++N++I  Y  + +   +   F  +  +G +  
Sbjct: 262 FISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLK 321

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
             TLVSL  +   L       ++HG+ ++   F+    +  A+  +Y+KL  I SA  +F
Sbjct: 322 SSTLVSLVPVSGHLMLIY---AIHGYSLKSN-FLSHTSVSTALTTVYSKLNEIESARKLF 377

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           +  P K + SWN +I+GY QNGL  +AI +F+ M+  +E +PN  T   IL A + +GAL
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQN-SEFSPNPVTITCILSACAQLGAL 436

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             G  +H  V        ++V+T L+ MY KCG I +A  LF  +P+ + V WN +IS +
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGY 496

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           G+HG G +AL  F +ML+ G+ P  +TF+ +L ACSH+GLV EG   F+ M   +G +P 
Sbjct: 497 GLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           +KHY C+VD+ GRAGHL  A  FI+ MP++P  S+W  LLGACRIH +  L    S++LF
Sbjct: 557 VKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLF 616

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           E+D +NVGY+VL+SNI++    +     VR  A+ R L K PG++ IE+     +F +G+
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
           ++HP+ + I+++L  L  KM+  GY P+    L DVEE+E+E ++  HSERLAIAFG+I+
Sbjct: 677 QSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIA 736

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + P + I+I KNLRVC DCH  TK IS+ITER I+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 737 TEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 300/738 (40%), Positives = 439/738 (59%), Gaps = 15/738 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G L+ +R  FD I   +   +N++I  Y   G    A+D  Y+  L   + P+ YTFP V
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAID-LYRSMLYFRVPPNKYTFPFV 105

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           LKAC  L D   G+ IH     +G   D+FV+ +L+ +Y R      A  +F  MP+RD 
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165

Query: 210 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
            +WNAM++GY   G    A+  +LD     G+  +  T+ S+LP+ A+   +  G  +H 
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225

Query: 269 YIVKHGLEFN---LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           Y ++  L+ N   + +   L++MYAK   + +A RVF  M  R+ V+W+++I  +   + 
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDR 285

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTS---IVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
              A   F  M   G+    L+  S+ S   + A L D R    +H  + + G    D+ 
Sbjct: 286 MTEAFNLFKDMLVEGMC--FLSATSVASALRVCASLADLRMGTQLHALLAKSG-IHADLT 342

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
            GN+++ MYAK G+IN A  +F+ + +KD IS+  L++GY QNG A EA  VF+ M+ CN
Sbjct: 343 AGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACN 402

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + P+  T VS++PA SH+ AL+ G   H  VI   L  +  +   L+DMY KCGRID +
Sbjct: 403 -VQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLS 461

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F ++P    V WN +I+ +GIHG G +A   F  M ++G  PD +TF+ L+ ACSHS
Sbjct: 462 RQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV+EG+ +F  M  ++GI P ++HY CMVDL  R G L  A+ FIQ+MP++ D  +WGA
Sbjct: 522 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGA 581

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LLGACRIH N++LG   S  + ++  E  G +VL+SNI++  G+++   EVR + + +G 
Sbjct: 582 LLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 641

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK+PG S IE+N  +  F  G+++HP    IY EL N+   +K LGY  D SFVLQD+EE
Sbjct: 642 KKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEE 701

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
           +EKE  L  HSE+LAIAFG++S      I + KNLRVCGDCH   K+++ +  R IIVRD
Sbjct: 702 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 761

Query: 803 SNRFHHFKDGICSCGDYW 820
           +NRFHHFK+G CSCGD+W
Sbjct: 762 ANRFHHFKNGQCSCGDFW 779



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 163/586 (27%), Positives = 278/586 (47%), Gaps = 35/586 (5%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C+ L  +   + +HA     G    +F ST L++ Y        + + F  + 
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMP 161

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGK 163
            R+V  WN+M++ Y   G    A+          GLRP+  T     P+L     L  G 
Sbjct: 162 MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGT 221

Query: 164 KIHCSVLKLGF---EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            +H   L+      E  V +  +LL MY +      A ++F  M VR+  +W+A+I G+ 
Sbjct: 222 SVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFV 281

Query: 221 QSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
                 EA ++  +M +EG+  +   +VAS L VCA   ++  G  +H  + K G+  +L
Sbjct: 282 LCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADL 341

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
              N+L++MYAK G++  A  +FD++  +D +S+ ++++ Y Q+     A   F  MQ  
Sbjct: 342 TAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC 401

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            +QPD+ T+VSL    + L   ++ R  HG ++ RG  +E  I  N+++DMYAK G I+ 
Sbjct: 402 NVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSIC-NSLIDMYAKCGRIDL 460

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           +  VF+ +P +D++SWNT+I GY  +GL  EA  +F  M+      P+  T++ ++ A S
Sbjct: 461 SRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKN-QGFEPDDVTFICLIAACS 519

Query: 460 HVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-W 517
           H G + +G         K  +   +    C+VD+  + G +D+A      +P  + V  W
Sbjct: 520 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVW 579

Query: 518 NAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
            A++    IH     G +     +++  EG       FV L    S +G   E      +
Sbjct: 580 GALLGACRIHKNIDLGKQVSRMIQKLGPEGTG----NFVLLSNIFSAAGRFDEAAE-VRI 634

Query: 575 MQEEFGIKPHLKHYGCM-VDLFGRAGHLGMAHNFI---QNMPVRPD 616
           +Q+  G K   K  GC  +++ G        H F+   Q+ P  PD
Sbjct: 635 IQKVKGFK---KSPGCSWIEINGS------LHAFVGGDQSHPCSPD 671


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/781 (38%), Positives = 458/781 (58%), Gaps = 28/781 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L ++CT    + ++   ++ +G        TK+++ +   G  S +   F+H+  +    
Sbjct: 53  LLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVL 112

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           ++ M+  Y +   L +A+ CF+   +   +R     +  +L+ C   +D   G++IH  +
Sbjct: 113 YHIMLKGYAKNSSLGDAL-CFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLI 171

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  GFE ++FV  +++ +Y +    + A K+F+ M  +D  SW  +++GY Q+G+A  AL
Sbjct: 172 ITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRAL 231

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            ++ +M+  G   D +T+ SILP  A    +  G  IH Y  + G E  + V+N L++MY
Sbjct: 232 QLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMY 291

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G  R A  VF  M  + VVSWN++I    Q+ +   A   F  M   G  P  +T++
Sbjct: 292 FKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMM 351

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFM----------EDVIIGNAVVDMYAKLGIINS 399
            +    A L D           + RGWF+           +V + N+++ MY+K   ++ 
Sbjct: 352 GVLLACANLGD-----------LERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDI 400

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A ++F  L  K  ++WN +I GYAQNG   EA+ +F MM+    I  +  T V ++ A +
Sbjct: 401 AASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQS-QGIKLDCFTLVGVITALA 458

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
                RQ   IH   ++ C+  +VFV+T LVDMY KCG I  A  LF  +     + WNA
Sbjct: 459 DFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNA 518

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I  +G HG G + L+ F +M    V+P+ ITF+S+++ACSHSG V EG   F  MQE++
Sbjct: 519 MIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDY 578

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            ++P + HY  MVDL GRAG L  A NFIQ MP++P  S+ GA+LGAC+IH N+ELG  A
Sbjct: 579 YLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKA 638

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           + +LF++D +  GY+VL++NIYA+   W+ V +VR+   D+GL KTPG S +E+ N++  
Sbjct: 639 AQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHT 698

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           FY+G+  HP+ +KIY  L  L  ++K+ GYVPD   +  DVEED K+ +L+SHSERLAIA
Sbjct: 699 FYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIA 757

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++++ P + + I KNLRVCGDCH+ TK+IS +T REIIVRD  RFHHFK+G CSCGDY
Sbjct: 758 FGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDY 817

Query: 820 W 820
           W
Sbjct: 818 W 818


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 291/760 (38%), Positives = 450/760 (59%), Gaps = 7/760 (0%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRC 123
           ++HA+ + +G    VF +  LV  Y   G +  +R  F+   S RN  +WN ++S YV+ 
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            +  +A+  F +  + SG++P  + F  V+ AC   RN+  G+++H  V+++G++ DVF 
Sbjct: 181 DQCGDAIQVFGEM-VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT 239

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G  ++A  +F+ MP  D  SWNA+ISG   +G+   A+++L +M+  G+
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGL 299

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +  T++SIL  C+ +     G  IH +++K   + + ++   L++MYAK   +  A +
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  RD++  N++I+          A   F  +++ G+  +  TL ++    A L  
Sbjct: 360 VFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEA 419

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
              +R VH   ++ G F+ D  + N ++D Y K   ++ A  VFE     D+I+  ++IT
Sbjct: 420 ASTTRQVHALAVKIG-FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMIT 478

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
             +Q      AI++F  M     + P+     S+L A + + A  QG ++HA +IK    
Sbjct: 479 ALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D F    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL  F +M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +DEG+ P+HIT  S+L AC+H+GLV E +RYF+ M+E FGI    +HY CM+DL GRAG 
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   + +MP + +ASIWGALLGA R+H + ELG +A+++LF ++ E  G +VL++N 
Sbjct: 658 LDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 717

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G W  V +VR L +D  +KK P  S IEV +KV  F  G+++HP  ++IY +L  L
Sbjct: 718 YASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              M   G+VP+    L D++  EKE +L+ HSERLA+AF ++S+PP +PI++ KNLR+C
Sbjct: 778 GDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 837

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   KFIS+I  REII+RD NRFHHF+DG CSCGDYW
Sbjct: 838 RDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 254/493 (51%), Gaps = 13/493 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           +  E  F  +  +CT   ++   +++HA++V  G  K VF++  LV+ Y  +G +  +  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            F+ +   +V +WN++IS  V  G    A++   Q    SGL P+ +T   +LKAC    
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY-SGLVPNVFTLSSILKACSGAG 317

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G++IH  ++K   + D ++   L+ MY +    + ARK+FD M  RD    NA+IS
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G    G   EAL +  E+R EG+ ++  T+A++L   A  +   +   +H   VK G  F
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V N LI+ Y K   +  A RVF++    D+++  S+I A  Q +    A   F  M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G++PD   L SL +  A L+     + VH  +++R  FM D   GNA+V  YAK G I
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSI 556

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             A   F  LP + V+SW+ +I G AQ+G    A+E+F  M +   INPN  T  S+L A
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD-EGINPNHITMTSVLCA 615

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            +H G + +  K +   +K     D      +C++D+ G+ G++DDAM L   +P ++++
Sbjct: 616 CNHAGLVDEA-KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674

Query: 515 VPWNAIISCHGIH 527
             W A++    +H
Sbjct: 675 SIWGALLGASRVH 687



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 281/569 (49%), Gaps = 10/569 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LHA L+ SG + +      L++FY+       +R  FD I      +W+S+++ Y   G 
Sbjct: 26  LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
              A+  F+      G+  + +  P VLK   +   G ++H   +  GF  DVFVA +L+
Sbjct: 84  PRSAIQAFHGMR-AEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALV 142

Query: 186 HMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            MY  FG  + AR++F++    R++ SWN ++S Y ++    +A+ +  EM   G+    
Sbjct: 143 AMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
              + ++  C  S NI +G  +H  +V+ G + ++F +N L++MY K G +  A  +F++
Sbjct: 203 FGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEK 262

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M + DVVSWN++I+    +     A      M+ +G+ P++ TL S+    +        
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +HGF+++     +D  IG  +VDMYAK   ++ A  VF+ +  +D+I  N LI+G + 
Sbjct: 323 RQIHGFMIKANADSDD-YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSH 381

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
            G   EA+ +F  + +   +  N+ T  ++L + + + A     ++HA  +K    FD  
Sbjct: 382 GGRHDEALSLFYELRK-EGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAH 440

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V   L+D Y KC  + DA  +F +      +   ++I+       G+ A+  F +ML +G
Sbjct: 441 VVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG 500

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           + PD     SLL AC+      +G Q + H+++ +F       +   +V  + + G +  
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIED 558

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGN 632
           A     ++P R   S W A++G    HG+
Sbjct: 559 AELAFSSLPERGVVS-WSAMIGGLAQHGH 586


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/783 (36%), Positives = 459/783 (58%), Gaps = 9/783 (1%)

Query: 44   ESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
            E+ E  +    ++C+    L   K++HA  +  G    +F  + LV+ YA  G++  +  
Sbjct: 226  EANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAER 285

Query: 101  TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
             F  +  +N  +WN++++ + + G   + ++ F + T  S +    +T   VLK C N  
Sbjct: 286  VFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMT-GSEINFSKFTLSTVLKGCANSG 344

Query: 159  -LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             L  G+ +H   +++G E D F++  L+ MY + GLA  A K+F  +   D  SW+A+I+
Sbjct: 345  NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIIT 404

Query: 218  GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
               Q G + EA ++   MR  GV  +  T+AS++       ++  G  IH  + K+G E+
Sbjct: 405  CLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEY 464

Query: 278  NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            +  V N L+ MY K G ++   RVF+    RD++SWN++++ +  +    T    F  M 
Sbjct: 465  DNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQML 524

Query: 338  QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
              G  P++ T +S+    + L+D    + VH  I++      D  +G A+VDMYAK   +
Sbjct: 525  AEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND-FVGTALVDMYAKNRFL 583

Query: 398  NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
              A  +F  L  +D+ +W  ++ GYAQ+G   +A++ F  M+    + PN+ T  S L  
Sbjct: 584  EDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR-EGVKPNEFTLASSLSG 642

Query: 458  YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
             S +  L  G ++H+  IK     D+FVA+ LVDMY KCG ++DA  +F  +    +V W
Sbjct: 643  CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 702

Query: 518  NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
            N II  +  HGQG KAL  F  MLDEG  PD +TF+ +L+ACSH GL+ EG+++F+ + +
Sbjct: 703  NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK 762

Query: 578  EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
             +GI P ++HY CMVD+ GRAG      +FI+ M +  +  IW  +LGAC++HGN+E G 
Sbjct: 763  IYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGE 822

Query: 638  VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             A+ +LFE++ E    Y+L+SN++A  G W+ V  VR+L   RG+KK PG S +EVN +V
Sbjct: 823  RAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQV 882

Query: 698  DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             +F + + +HPK  +I+ +L++L  K+ S+GY P+   VL +V + EK+ +L  HSERLA
Sbjct: 883  HVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLA 942

Query: 758  IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
            +AF ++S+  +  I+IFKNLR+CGDCH++ K IS+IT +E++VRD N FHHFK+G CSC 
Sbjct: 943  LAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQ 1002

Query: 818  DYW 820
            ++W
Sbjct: 1003 NFW 1005



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/425 (34%), Positives = 218/425 (51%), Gaps = 5/425 (1%)

Query: 149 FPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +L+ C    +L +GK IH  V+K G   D  +  SL+++Y + G AN A K+F ++P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            RD  SW A+I+G+   G    A+++  EMR EGV  +  T A+ L  C+   ++  G  
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H   +K G   +LFV + L+++YAK G M  A RVF  M +++ VSWN+++  + Q  D
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
                  F  M  + I     TL ++    A   + R  + VH   +R G  + D  I  
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCEL-DEFISC 369

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            +VDMY+K G+   A  VF  +   DV+SW+ +IT   Q G + EA EVF+ M     I 
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI- 428

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PNQ T  S++ A + +G L  G  IHA V K    +D  V   LV MY K G + D   +
Sbjct: 429 PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F        + WNA++S    +   D  L  F QML EG  P+  TF+S+L +CS    V
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548

Query: 566 SEGQR 570
             G++
Sbjct: 549 DLGKQ 553



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 195/377 (51%), Gaps = 4/377 (1%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           + +L  CA   ++  G  IH  ++K G+  +  + N+L+N+YAK G   +A +VF ++ E
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           RDVVSW ++I  +        A   F  M++ G++ +  T  +     +   D    + V
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H   ++ G F  D+ +G+A+VD+YAK G +  A  VF  +P ++ +SWN L+ G+AQ G 
Sbjct: 252 HAEAIKVGDF-SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
           A + + +F  M   +EIN ++ T  ++L   ++ G LR G  +H+  I+     D F++ 
Sbjct: 311 AEKVLNLFCRMTG-SEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
           CLVDMY KCG   DA+ +F ++     V W+AII+C    GQ  +A   F++M   GV P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           +  T  SL++A +  G +  G+   H    ++G +        +V ++ + G +      
Sbjct: 430 NQFTLASLVSAATDLGDLYYGES-IHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488

Query: 608 IQNMPVRPDASIWGALL 624
            +    R D   W ALL
Sbjct: 489 FEATTNR-DLISWNALL 504



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 2/184 (1%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y  +L   +  G L +G  IH +VIK+ +  D  +   LV++Y KCG  + A  +F ++P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
               V W A+I+     G G  A+N F +M  EGV  +  T+ + L ACS   L  E  +
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMC-LDLEFGK 249

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
             H    + G    L     +VDL+ + G + +A      MP + +A  W ALL      
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLNGFAQM 308

Query: 631 GNME 634
           G+ E
Sbjct: 309 GDAE 312


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 291/760 (38%), Positives = 450/760 (59%), Gaps = 7/760 (0%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRC 123
           ++HA+ + +G    VF +  LV  Y   G +  +R  F+   S RN  +WN ++S YV+ 
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            +  +A+  F +  + SG++P  + F  V+ AC   RN+  G+++H  V+++G++ DVF 
Sbjct: 181 DQCGDAIQVFGEM-VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT 239

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G  ++A  +F+ MP  D  SWNA+ISG   +G+   A+++L +M+  G+
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGL 299

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +  T++SIL  C+ +     G  IH +++K   + + ++   L++MYAK   +  A +
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  RD++  N++I+          A   F  +++ G+  +  TL ++    A L  
Sbjct: 360 VFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEA 419

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
              +R VH   ++ G F+ D  + N ++D Y K   ++ A  VFE     D+I+  ++IT
Sbjct: 420 ASTTRQVHALAVKIG-FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMIT 478

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
             +Q      AI++F  M     + P+     S+L A + + A  QG ++HA +IK    
Sbjct: 479 ALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFM 537

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D F    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL  F +M
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRM 597

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +DEG+ P+HIT  S+L AC+H+GLV E +RYF+ M+E FGI    +HY CM+DL GRAG 
Sbjct: 598 VDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGK 657

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   + +MP + +ASIWGALLGA R+H + ELG +A+++LF ++ E  G +VL++N 
Sbjct: 658 LDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANT 717

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G W  V +VR L +D  +KK P  S IEV +KV  F  G+++HP  ++IY +L  L
Sbjct: 718 YASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVEL 777

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              M   G+VP+    L D++  EKE +L+ HSERLA+AF ++S+PP +PI++ KNLR+C
Sbjct: 778 GDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRIC 837

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   KFIS+I  REII+RD NRFHHF+DG CSCGDYW
Sbjct: 838 RDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 254/493 (51%), Gaps = 13/493 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           +  E  F  +  +CT   ++   +++HA++V  G  K VF++  LV+ Y  +G +  +  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            F+ +   +V +WN++IS  V  G    A++   Q    SGL P+ +T   +LKAC    
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKY-SGLVPNVFTLSSILKACSGAG 317

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G++IH  ++K   + D ++   L+ MY +    + ARK+FD M  RD    NA+IS
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G    G   EAL +  E+R EG+ ++  T+A++L   A  +   +   +H   VK G  F
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V N LI+ Y K   +  A RVF++    D+++  S+I A  Q +    A   F  M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G++PD   L SL +  A L+     + VH  +++R  FM D   GNA+V  YAK G I
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSI 556

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             A   F  LP + V+SW+ +I G AQ+G    A+E+F  M +   INPN  T  S+L A
Sbjct: 557 EDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD-EGINPNHITMTSVLCA 615

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            +H G + +  K +   +K     D      +C++D+ G+ G++DDAM L   +P ++++
Sbjct: 616 CNHAGLVDEA-KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674

Query: 515 VPWNAIISCHGIH 527
             W A++    +H
Sbjct: 675 SIWGALLGASRVH 687



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 281/569 (49%), Gaps = 10/569 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LHA L+ SG + +      L++FY+       +R  FD I      +W+S+++ Y   G 
Sbjct: 26  LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGL 83

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
              A+  F+      G+  + +  P VLK   +   G ++H   +  GF  DVFVA +L+
Sbjct: 84  PRSAIQAFHGMR-AEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALV 142

Query: 186 HMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            MY  FG  + AR++F++    R++ SWN ++S Y ++    +A+ +  EM   G+    
Sbjct: 143 AMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
              + ++  C  S NI +G  +H  +V+ G + ++F +N L++MY K G +  A  +F++
Sbjct: 203 FGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEK 262

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M + DVVSWN++I+    +     A      M+ +G+ P++ TL S+    +        
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +HGF+++     +D  IG  +VDMYAK   ++ A  VF+ +  +D+I  N LI+G + 
Sbjct: 323 RQIHGFMIKANADSDDY-IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSH 381

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
            G   EA+ +F  + +   +  N+ T  ++L + + + A     ++HA  +K    FD  
Sbjct: 382 GGRHDEALSLFYELRK-EGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAH 440

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V   L+D Y KC  + DA  +F +      +   ++I+       G+ A+  F +ML +G
Sbjct: 441 VVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG 500

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           + PD     SLL AC+      +G Q + H+++ +F       +   +V  + + G +  
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN--ALVYTYAKCGSIED 558

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGN 632
           A     ++P R   S W A++G    HG+
Sbjct: 559 AELAFSSLPERGVVS-WSAMIGGLAQHGH 586


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 285/778 (36%), Positives = 455/778 (58%), Gaps = 10/778 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L Q C+    + H +R+H  +   G  +       L+  YA  G +  ++  F+ + 
Sbjct: 7   FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            ++V+ W  MI +Y + G    A+  FYQ      + P   T+  +L AC    +L DG 
Sbjct: 67  RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQ-EEDVMPTKVTYVAILNACASTESLKDGM 125

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  +L+ GFE DVFV  +L++MY + G    A   F  +  RD  SW AMI+   Q  
Sbjct: 126 EIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHD 185

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               A  +   M+L+GV  + IT+ ++       + +  G  ++  +    +E ++ V N
Sbjct: 186 QFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMN 245

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           + +NM+   G++  A R+F+ M++RDVV+WN +I  Y Q+ +   A   F  +QQ G++ 
Sbjct: 246 SAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKA 305

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +T V + ++   L      + +H  +   G +  D ++  A++ +Y +      A  +
Sbjct: 306 NDITFVLMLNVYTSLTSLAKGKVIHELVKEAG-YDRDAVVATALMSLYGRCEAPGQAWKI 364

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +  KDVI+W  +   YAQNG   EA+++FQ M+      P   T V++L   +H+ A
Sbjct: 365 FVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ-LEGRRPTSATLVAVLDTCAHLAA 423

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L++G +IH+ +I+N    ++ V T L++MYGKCG++ +AMS+F ++ +   + WN+++  
Sbjct: 424 LQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGA 483

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  HG  D+ L  F QM  +GV+ D ++FVS+L+A SHSG V++G +YF  M ++F I P
Sbjct: 484 YAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 543

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMP-VRPDASIWGALLGACRIHGNMELGAVASDR 642
             + YGC+VDL GRAG +  A + +  +    PD  +W  LLGACR H   +    A+++
Sbjct: 544 TPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQ 603

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + E D  + G YV++SN+YA  G W+GV+ +R L R RG+KK PG SSIE+ N+V  F  
Sbjct: 604 VLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLE 663

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+R+HP+   IY EL  L ++M++ GY+PD   +L DVE++ KE +L  HSERLAIAFG+
Sbjct: 664 GDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGL 723

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+PP +P+++ KNLRVC DCH  TK+IS++  REI+VRD++RFH+FKDG CSC DYW
Sbjct: 724 ISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 185/381 (48%), Gaps = 4/381 (1%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D     ++L  C+ + N+  G  +H ++   G E N  V  +LI MYA+ G +  A +VF
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           + +  +DV +W  +I  Y Q  D   A G F  MQ+  + P  +T V++ +  A     +
Sbjct: 63  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           +   +HG I+++G F  DV +G A+++MY K G +  A   F+ L  +DV+SW  +I   
Sbjct: 123 DGMEIHGQILQQG-FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            Q+   + A  +++ M + + + PN+ T  ++  AY     L +G  ++  V    +  D
Sbjct: 182 VQHDQFALARWLYRRM-QLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V V    V+M+G  G + DA  LF  +     V WN +I+ +  +    +A+  F ++  
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           +GV+ + ITFV +L   +    +++G +  H + +E G          ++ L+GR    G
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDAVVATALMSLYGRCEAPG 359

Query: 603 MAHNFIQNMPVRPDASIWGAL 623
            A     +M  + D   W  +
Sbjct: 360 QAWKIFVDMGSK-DVITWTVM 379



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 171/353 (48%), Gaps = 23/353 (6%)

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD    V+L    +   +  + R VH  +  RG+   +++ G+ ++ MYA+ G +  A 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGH-LIQMYAQCGSVPEAQ 59

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VFE L  KDV +W  +I  Y Q G    A+ +F  M+E  ++ P + TYV+IL A +  
Sbjct: 60  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQE-EDVMPTKVTYVAILNACAST 118

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +L+ G++IH ++++     DVFV T L++MY KCG +  A   F ++     V W A+I
Sbjct: 119 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 178

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           +    H Q   A   +R+M  +GV P+ IT  ++  A      +SEG+  + ++     +
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV-M 237

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG----------ACRIHG 631
           +  ++     V++FG AG LG A    ++M V  D   W  ++           A R+ G
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFG 296

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            ++   V ++ +          +VLM N+Y ++        +  L ++ G  +
Sbjct: 297 RLQQDGVKANDI---------TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 340


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 439/761 (57%), Gaps = 8/761 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H +      +  VF    L+  Y   G +  +   F+H+  RN+ +WNS+I  +   G 
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182

Query: 126 LSEAVDCFYQFTL-TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
           L E+ + F +  +      PD  T   VL  C    ++  G  +H   +KLG   ++ V 
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ MY +    + A+ LFD    ++  SWN+MI GY +  +      +L +M+ E   
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 242 M--DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           M  D  T+ ++LPVC     + S   +H Y  +HGL+ N  V+N  I  Y + G +  + 
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           RVFD M  + V SWN+++  Y Q++DP  A   +  M  +G+ PD  T+ SL    +++ 
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                  +HGF +R G  + D  IG +++ +Y   G   +A  +F+G+  + ++SWN +I
Sbjct: 423 SLHYGEEIHGFALRNGLAV-DPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 481

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY+QNGL  EAI +F+ M   + I P +   + +  A S + ALR G ++H   +K  L
Sbjct: 482 AGYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHL 540

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D+FV++ ++DMY K G I  +  +F ++       WN II+ +GIHG+G +AL  F +
Sbjct: 541 TEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEK 600

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           ML  G++PD  TF  +L ACSH+GLV +G  YF+ M     I+P L+HY C+VD+ GRAG
Sbjct: 601 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAG 660

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            +  A   I+ MP  PD+ IW +LL +CRIHGN+ LG   +++L E++ E    YVL+SN
Sbjct: 661 RIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISN 720

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           ++A  GKW+ V  VR   +D GL+K  G S IEV  KV  F  G+   P+ E++ +  R 
Sbjct: 721 LFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRR 780

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           L  K+ S+GY PD   VL D+EE++K  IL  HSE+LAI+FG++++    P++++KNLR+
Sbjct: 781 LEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRI 840

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCHN  KFIS++  R+I+VRD+ RFHHF+DGICSCGDYW
Sbjct: 841 CGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 180/594 (30%), Positives = 315/594 (53%), Gaps = 23/594 (3%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYR 108
           L Q+C +   +   +RLH ++  S +    F  +T+++  Y+  G  S SR  FD +  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           N++ WN+++S Y R     +A+  F +    +  +PD +T P V+KAC  L+D   G+ I
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H    K+    DVFV  +L+ MY + GL   A K+F+ MP R+  SWN++I G+ ++G  
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 226 VEALDILDEMRL--EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            E+ +   EM +  E    D  T+ ++LPVCA  ++I  G+ +H   VK GL   L V+N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ--QAGI 341
           +LI+MY+K   +  A  +FD+  ++++VSWNS+I  Y +  D          MQ   A +
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + D  T++++  +  + ++ ++ + +HG+  R G    + ++ NA +  Y + G + S+ 
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHG-LQSNELVANAFIAAYTRCGALCSSE 362

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+ +  K V SWN L+ GYAQN    +A++++  M +   ++P+  T  S+L A S +
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG-LDPDWFTIGSLLLACSRM 421

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +L  G +IH   ++N L  D F+   L+ +Y  CG+   A  LF  +   S V WN +I
Sbjct: 422 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 481

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +  +G  D+A+N FRQML +G++P  I  + +  ACS    +  G+   H     F +
Sbjct: 482 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE-LHC----FAL 536

Query: 582 KPHLKH----YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           K HL         ++D++ + G +G++      +  + D + W  ++    IHG
Sbjct: 537 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVIIAGYGIHG 589



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 9/177 (5%)

Query: 56  SCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           +C++L  +   K LH   + +   + +F S+ +++ YA  G +  S+  FD +  ++V +
Sbjct: 518 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 577

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSV 169
           WN +I+ Y   GR  EA++ F +  L  GL+PD +TF  +L AC +   + DG +    +
Sbjct: 578 WNVIIAGYGIHGRGKEALELFEKM-LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQM 636

Query: 170 LKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGN 224
           L L   E  +     ++ M  R G  + A +L ++MP   DS  W++++S     GN
Sbjct: 637 LNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 693


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 293/793 (36%), Positives = 444/793 (55%), Gaps = 75/793 (9%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNF 88
           N++++   C ++E     +  + Q C     L   K++H+++  +          KLV+ 
Sbjct: 84  NAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSL 143

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           YA  GDL   R  FD +  +NVY WN M+S Y + G   E++ C ++  +  G       
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKG------- 195

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
                      ++GK+                                A +LFD +  RD
Sbjct: 196 -----------IEGKR-----------------------------PESASELFDKLCDRD 215

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN+MISGY  +G     L+I  +M   G+ +D  T+ S+L  CA S  +  G  +H 
Sbjct: 216 VISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             +K   E  +  SN L++MY+K G +  ALRVF++M ER+VVSW S+IA Y +      
Sbjct: 276 LAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A      M++ G++ D++   S+    A+     N + VH +I +      ++ + NA++
Sbjct: 336 AIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALM 394

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMY K G ++ A +VF  + VKD+ISWNT+I                       E+ P+ 
Sbjct: 395 DMYTKCGSMDGANSVFSTMVVKDIISWNTMI----------------------GELKPDS 432

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T   ILPA + + AL +G +IH  +++N    D  VA  LVD+Y KCG +  A  LF  
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P    V W  +IS +G+HG G++A+  F +M D G+ PD ++F+S+L ACSHSGL+ +G
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            R+F++M+ +F I+P L+HY CMVDL  R G+L  A+ FI+ +P+ PDA+IWGALL  CR
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           I+ ++EL    ++R+FE++ EN GYYVL++NIYA   KWE V  +R     +GL+K PG 
Sbjct: 613 IYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGC 672

Query: 689 SSIEVNNKVDIFYTGNR-THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           S IE+  KV++F +GN  +HP  +KI   L+ +  KMK  GY P   + L + +E +KE 
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEM 732

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
            L  HSE+LA+AFG+++ PP+  +++ KNLRVCGDCH   KF+S+ T REI++RDSNRFH
Sbjct: 733 ALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFH 792

Query: 808 HFKDGICSCGDYW 820
           HFK+G CSC  +W
Sbjct: 793 HFKNGYCSCRGFW 805



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 210/479 (43%), Gaps = 84/479 (17%)

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           R    +NA I  +CQ GN   A++++     +   ++  T +S+L +CA S ++  G  +
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAMELV--CMCQKSELETKTYSSVLQLCAGSKSLTDGKKV 121

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM--------------------- 305
           H  I  + +  +  +   L+++YA  G ++   RVFD M                     
Sbjct: 122 HSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDF 181

Query: 306 ------------------------------MERDVVSWNSIIAAYEQSNDPITAHGF--F 333
                                          +RDV+SWNS+I+ Y   ++ +T  G   +
Sbjct: 182 KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGY--VSNGLTERGLEIY 239

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M   GI  DL T++S+    A        ++VH   + +  F   +   N ++DMY+K
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAI-KSTFERRINFSNTLLDMYSK 298

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G ++ A  VFE +  ++V+SW ++I GY ++G +  AI + Q ME+   +  +     S
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEK-EGVKLDVVATTS 357

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           IL A +  G+L  G  +H  +  N +  ++FV   L+DMY KCG +D A S+F  +    
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YF 572
            + WN +I                       ++PD  T   +L AC+    +  G+  + 
Sbjct: 418 IISWNTMIG---------------------ELKPDSRTMACILPACASLSALERGKEIHG 456

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           ++++  +    H+ +   +VDL+ + G LG+A      +P + D   W  ++    +HG
Sbjct: 457 YILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIPSK-DLVSWTVMISGYGMHG 512



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 113/293 (38%), Gaps = 66/293 (22%)

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           + V  +N  I  + Q G    A+E+  M   C +      TY S+L   +   +L  G K
Sbjct: 64  RQVTDYNAKILHFCQLGNLENAMELVCM---CQKSELETKTYSSVLQLCAGSKSLTDGKK 120

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV-------------------- 509
           +H+ +  N +  D  +   LV +Y  CG + +   +F  +                    
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 510 --------------------PRSSS-----------VPWNAIISCHGIHGQGDKALNFFR 538
                               P S+S           + WN++IS +  +G  ++ L  ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           QM+  G+  D  T +S+L  C++SG +S G +  H +  +   +  +     ++D++ + 
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIKSTFERRINFSNTLLDMYSKC 299

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALL----------GACRIHGNMELGAVASD 641
           G L  A    + M  R   S W +++          GA R+   ME   V  D
Sbjct: 300 GDLDGALRVFEKMGERNVVS-WTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLD 351


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 284/699 (40%), Positives = 422/699 (60%), Gaps = 7/699 (1%)

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAA 182
           L  A+  F   +  SG  P   TF  +LK C    +L  G+ +H  +   G   +   A 
Sbjct: 205 LRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAAT 264

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVS 241
           +L +MY +      AR++FD MP RD  +WNA+++GY ++G A  A+ ++  M+ E G  
Sbjct: 265 ALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGER 324

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D +T+ S+LP CA +  + +   +H + V+ G +  + VS  ++++Y K G +  A +V
Sbjct: 325 PDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKV 384

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD M +R+ VSWN++I  Y ++ D   A   F  M   G+    +++++      +L   
Sbjct: 385 FDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFL 444

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              R VH  ++R G    +V + NA++ MY K    + A  VF+ L  K  +SWN +I G
Sbjct: 445 DEGRRVHELLVRIG-LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILG 503

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
             QNG + +A+ +F  M+  N + P+  T VSI+PA + +    Q   IH   I+  L  
Sbjct: 504 CTQNGSSEDAVRLFSRMQLEN-VKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQ 562

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV+V T L+DMY KCGR+  A SLF        + WNA+I  +G HG G  A+  F +M 
Sbjct: 563 DVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMK 622

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             G  P+  TF+S+L+ACSH+GLV EGQ YF  M+E++G++P ++HYG MVDL GRAG L
Sbjct: 623 SSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKL 682

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A +FIQ MP+ P  S++GA+LGAC++H N+EL   ++ R+FE++ E   Y+VL++NIY
Sbjct: 683 HEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIY 742

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           AN   W+ V  VR+    +GL+KTPGWS +++ N++  FY+G+  H + + IY  L  L 
Sbjct: 743 ANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLI 802

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
            ++K++GYVPD   +  DVE+D K  +L +HSE+LAIA+G+I + P + IQI KNLRVC 
Sbjct: 803 EEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCK 861

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCHN TK IS +T REII+RD  RFHHFKDG CSCGDYW
Sbjct: 862 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 263/508 (51%), Gaps = 14/508 (2%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L + C     L   + +HA L   G      ++T L N YA       +R  FD + 
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMP 287

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            R+   WN++++ Y R G    AV    +     G RPD  T   VL AC +   L   +
Sbjct: 288 ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   ++ GF+  V V+ ++L +YC+ G  + ARK+FD M  R+S SWNAMI GY ++G
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +A EAL +   M  EGV +  ++V + L  C     +  G  +H  +V+ GLE N+ V N
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI MY K      A +VFD++  +  VSWN++I    Q+     A   F+ MQ   ++P
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D  TLVS+   +A ++D   +R +HG+ +R     +DV +  A++DMYAK G ++ A ++
Sbjct: 528 DSFTLVSIIPALADISDPLQARWIHGYSIRL-HLDQDVYVLTALIDMYAKCGRVSIARSL 586

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     + VI+WN +I GY  +G    A+E+F+ M+   ++ PN+ T++S+L A SH G 
Sbjct: 587 FNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV-PNETTFLSVLSACSHAGL 645

Query: 464 LRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAII 521
           + +G +  + + ++  L   +     +VD+ G+ G++ +A S   ++P    +  + A++
Sbjct: 646 VDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAML 705

Query: 522 SCHGIHGQ----GDKALNFFRQMLDEGV 545
               +H       + A   F    +EGV
Sbjct: 706 GACKLHKNVELAEESAQRIFELEPEEGV 733


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 306/814 (37%), Positives = 462/814 (56%), Gaps = 22/814 (2%)

Query: 12  RLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSC-TKLHHVKRLHALL 70
           +LC    L QA + L S     + +  DC         F  L + C  K  + +  +   
Sbjct: 7   QLCLSGNLEQALKHLASMQEVKIPVEEDC---------FVALIRLCENKRGYSEGEYVWK 57

Query: 71  VVSGKIKTVFS---STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
            V   + T+ S      L++ +   GD+  + + F  +  R++++WN ++  Y + G   
Sbjct: 58  AVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFD 117

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASL 184
           EA+ C Y   L +G+RPD YTFP VL++C    +LV G+++H  V++  F+ DV V  +L
Sbjct: 118 EAL-CLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNAL 176

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           + MY + G    AR LFD MP RD  SWNAMISGY ++   +E L++   MR   +  D 
Sbjct: 177 ITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDL 236

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +T+ S++  C    +   G  +H Y+V+   + N+ V N+LI MY   G  + A  VF  
Sbjct: 237 MTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSG 296

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M  RDVVSW +II+    +  P  A   + TM+  G  PD +T+ S+ S  A L      
Sbjct: 297 MECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMG 356

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
             +H    R G  +  V++ N+++DMY+K   I  A  +F  +P KDVISW ++I G   
Sbjct: 357 MKLHELAERTGHILY-VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRI 415

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           N    EA+  F+ M    +  PN  T +S L A + VGAL  G +IHA  +K  + FD F
Sbjct: 416 NNRCFEALIFFRKM--ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGF 473

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           +   ++D+Y +CGR+  A++ F  +       WN +++ +   G+G   +  F++M++  
Sbjct: 474 LPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESE 532

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           + PD +TF+SLL ACS SG+V+EG  YF  M+  + I P+LKHY C+VDL GRAG L  A
Sbjct: 533 INPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEA 592

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
           H FI+ MP++PD +IWGALL ACRIH ++ LG +A+  +F+ D+E++GYY+L+ N+YA+ 
Sbjct: 593 HEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADS 652

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           GKW+ V +VR   ++ GL   PG S +EV  KV  F +G+  HP+ ++I   L     KM
Sbjct: 653 GKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKM 712

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           K+ G+   +   +  ++   K  I   HSER AIA+ +I+S P  PI + KNL +C  CH
Sbjct: 713 KTSGFNGQECSSMDGIQTS-KADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCH 771

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           +  KFIS+I  REI VRD+ +FHHFKDG+CSCGD
Sbjct: 772 STVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 208/419 (49%), Gaps = 5/419 (1%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N+ +   C SGN  +AL  L  M+   + ++     +++ +C        G  +   ++ 
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 273 HGLE-FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
             +   ++ + N L++M+ +FG + +A  VF +M ERD+ SWN ++  Y ++     A  
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            +  +  AGI+PD+ T  S+    A   D    R VH  ++R  + M DV + NA++ MY
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDM-DVDVVNALITMY 180

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K G + SA  +F+ +P +D ISWN +I+GY +N    E +E+F  M E + I+P+  T 
Sbjct: 181 VKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELS-IDPDLMTM 239

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S++ A   +G  R G ++H+ V++     ++ V   L+ MY   G   +A S+F  +  
Sbjct: 240 TSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMEC 299

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V W  IIS    +   DKAL  ++ M   G  PD +T  S+L+AC+  G +  G + 
Sbjct: 300 RDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMK- 358

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
            H + E  G   ++     ++D++ +   +  A      +P + D   W +++   RI+
Sbjct: 359 LHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDK-DVISWTSVINGLRIN 416


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 299/764 (39%), Positives = 444/764 (58%), Gaps = 6/764 (0%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +H+ +  S     VF +T LVN Y   G L+ +R  FD +  R+V TWNSMIS 
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW 176
           Y    R  EA   F Q     G R D  TF  +L AC N   L  GK +  S+ +  FE 
Sbjct: 236 YSISERSGEAFFIF-QRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+FV  +L+ MY R      A ++F  M   +  +W+A+I+ +   G+  EAL     M+
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            EG+  + +T  S+L        +     IHL I +HGL+    + N L+N+Y +     
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  VFDQ+   +++SWNS+I  Y Q      A   F TMQQ GIQPD +  +++     
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
             +  R  + VH  +   G      ++  ++V+MYAK G ++ A  + + +  + + +WN
Sbjct: 475 IGSHGRTRKLVHQCVEESG-LGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWN 533

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            LI GYA +G + EA+E +Q ++    I  ++ T++S+L A +   +L +G  IH+  ++
Sbjct: 534 VLINGYALHGRSREALEAYQKLQ-LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 592

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             L  DV V   L +MY KCG +++A  +F  +P  S+V WN ++  +  HG+ ++ L  
Sbjct: 593 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 652

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
            R+M  EGV+ + ITFVS+L++CSH+GL++EG +YFH +  + GI+   +HYGC+VDL G
Sbjct: 653 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLG 712

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG L  A  +I  MP+ P    W +LLGACR+  +++ G +A+ +L E+D  N    V+
Sbjct: 713 RAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVV 772

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIY+  G W+   ++R     R +KK PG SSI+V NKV  F   + +HP+  +IYD+
Sbjct: 773 LSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDK 832

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           +  L   M+  GYVPD   VL DV+E++KE +L  HSE+LAIAFG+IS+P  S + IFKN
Sbjct: 833 VEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKN 892

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVC DCH  TKFIS+IT REI+VRD++RFHHF+DG CSC DYW
Sbjct: 893 LRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 184/626 (29%), Positives = 310/626 (49%), Gaps = 15/626 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR--- 122
           +HAL +  G  +    +T L+N Y   G L  ++  F+ ++ +NV TWN+M+ VY     
Sbjct: 80  VHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGC 139

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
           C +L  AV+ F +  L  G++ +  TF  VL +  +   L  GK IH  V +     DVF
Sbjct: 140 CWKL--AVELFTRMLL-EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVF 196

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +L++ Y + G    ARK+FD MP R  G+WN+MIS Y  S  + EA  I   M+ EG
Sbjct: 197 VNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEG 256

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              D +T  SIL  C   + +  G  +   I +   E +LFV   LI MYA+      A 
Sbjct: 257 ERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAA 316

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VF +M + ++++W++II A+        A  +F  MQQ GI P+ +T +SL +     +
Sbjct: 317 QVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS 376

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                  +H  I   G   +   + NA+V++Y +    + A  VF+ L + ++ISWN++I
Sbjct: 377 GLEELSRIHLLITEHG-LDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMI 435

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
             Y Q     +A+++F+ M++   I P++  +++IL A +     R    +H  V ++ L
Sbjct: 436 GIYVQCERHDDALQLFRTMQQ-QGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGL 494

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
                V T LV+MY K G +D A  +  ++       WN +I+ + +HG+  +AL  +++
Sbjct: 495 GGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQK 554

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           +  E +  D +TF+S+L AC+ S  ++EG +  H    E G+   +     + +++ + G
Sbjct: 555 LQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCG 613

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVASDRLFEVDSENVGYYVLM 657
            +  A     +MP+R   S W  +L A   HG  E  L  +       V    + +  ++
Sbjct: 614 SMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVL 672

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLK 683
           S+        EG     SL  DRG++
Sbjct: 673 SSCSHAGLIAEGCQYFHSLGHDRGIE 698



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 186/641 (29%), Positives = 315/641 (49%), Gaps = 27/641 (4%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y+  G L  +   F  I  RNV +WN MIS Y       EA+  F+   L  G+ P+  
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLL-EGVAPNAI 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T   VL +C   R L DG  +H   L+ GF  +  VA +LL+MY + G    A+ +F++M
Sbjct: 60  TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119

Query: 205 PVRDSGSWNAMISGYCQSGNAVE-ALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
             ++  +WNAM+  Y   G   + A+++   M LEGV  + IT  ++L      D +  G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             IH  + +     ++FV+  L+N Y K G +  A +VFD M  R V +WNS+I+AY  S
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFIMRRGW----FM 378
                A   F  MQQ G + D +T +S+      L+ C N  ++ HG  +R       F 
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSI------LDACVNPETLQHGKHVRESISETSFE 293

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D+ +G A++ MYA+      A  VF  +   ++I+W+ +IT +A +G   EA+  F+MM
Sbjct: 294 LDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMM 353

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           ++   I PN+ T++S+L  ++    L +  +IH  + ++ L     +   LV++YG+C  
Sbjct: 354 QQ-EGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCES 412

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
            DDA ++F Q+   + + WN++I  +    + D AL  FR M  +G++PD + F+++L A
Sbjct: 413 PDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGA 472

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           C+  G     ++  H   EE G+         +V+++ +AG L +A   +Q M      +
Sbjct: 473 CT-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQIT 530

Query: 619 IWGALLGACRIHGNME--LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
            W  L+    +HG     L A    +L  +  + V +  +++   ++    EG   + S 
Sbjct: 531 AWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSN 589

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           A + GL      S + V N +   Y+   +     +I+D +
Sbjct: 590 AVECGLD-----SDVIVKNALTNMYSKCGSMENARRIFDSM 625



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 228/482 (47%), Gaps = 11/482 (2%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  +  +C     L H K +   +  +     +F  T L+  YA       +   F  
Sbjct: 262 VTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGR 321

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVD 161
           +   N+ TW+++I+ +   G   EA+  +++     G+ P+  TF  +L        L +
Sbjct: 322 MKQTNLITWSAIITAFADHGHCGEALR-YFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 380

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
             +IH  + + G +    +  +L+++Y R    + AR +FD + + +  SWN+MI  Y Q
Sbjct: 381 LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQ 440

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
                +AL +   M+ +G+  D +   +IL  C    +  +  L+H  + + GL  +  V
Sbjct: 441 CERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLV 500

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
             +L+NMYAK G +  A  +  +M E+ + +WN +I  Y        A   +  +Q   I
Sbjct: 501 QTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAI 560

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
             D +T +S+ +           + +H   +  G    DVI+ NA+ +MY+K G + +A 
Sbjct: 561 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECG-LDSDVIVKNALTNMYSKCGSMENAR 619

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+ +P++  +SWN ++  YAQ+G + E +++ + ME+   +  N  T+VS+L + SH 
Sbjct: 620 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ-EGVKLNGITFVSVLSSCSHA 678

Query: 462 GALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-VPWNA 519
           G + +G +  H+      +        CLVD+ G+ G++ +A     ++P     V W +
Sbjct: 679 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738

Query: 520 II 521
           ++
Sbjct: 739 LL 740


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/741 (39%), Positives = 443/741 (59%), Gaps = 22/741 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GDLS +RH FD I    ++ +N++I  Y   G  + A+  +         +P+ YTFP V
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGP-ALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           LKAC  L+D    + +HC   + G   D+FV+ +L+ +Y +      A  +F  MP RD 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            +WNAM++GY   G   + +  L  M+ +  + +  T+ ++LP+ A+   +  G  +H Y
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 270 IVK----HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
            V+    H  +  + V   L++MYAK G + +A RVF+ M  R+ V+W++++  +     
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN------SRSVHGFIMRRGWFME 379
            + A   F  M   G     L  +S TS+ + L  C N       + +H  + + G    
Sbjct: 315 MLEAFSLFKDMLAQG-----LCFLSPTSVASALRACANLSDLCLGKQLHALLAKSG-LHT 368

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D+  GN+++ MYAK G+I+ A  +F+ + VKD +S++ L++GY QNG A EA  VF+ M+
Sbjct: 369 DLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQ 428

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
            CN + P+  T VS++PA SH+ AL+ G   H  VI   +  +  +   L+DMY KCGRI
Sbjct: 429 ACN-VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRI 487

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           D +  +F  +P    V WN +I+ +GIHG G +A   F  M  +   PD +TF+ L++AC
Sbjct: 488 DLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISAC 547

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGLV+EG+R+FHMM  ++GI P ++HY  MVDL  R G L  A+ FIQ MP++ D  +
Sbjct: 548 SHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRV 607

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WGALLGACR+H N++LG   S  + ++  E  G +VL+SNI++  G+++   EVR + ++
Sbjct: 608 WGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKE 667

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           +G KK+PG S IE+N  +  F  G+R+H +  +IY EL N+   +  LGY  D SFVLQD
Sbjct: 668 QGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQD 727

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           VEE+EKE  L  HSE+LAIAFG+++      I + KNLRVCGDCH   K+++ + +R II
Sbjct: 728 VEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAII 787

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+NRFHHFK+G CSCGD+W
Sbjct: 788 VRDANRFHHFKNGQCSCGDFW 808



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 273/557 (49%), Gaps = 28/557 (5%)

Query: 50  FDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C+ L      + +H     +G    +F ST LV+ YA       +   F  + 
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP 191

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGK 163
            R+V  WN+M++ Y   G+ S+ + C     +     P+  T     P+L     L  G+
Sbjct: 192 ARDVVAWNAMLAGYALHGKYSDTIACL--LLMQDDHAPNASTLVALLPLLAQHGALSQGR 249

Query: 164 KIHCSVLKLGFEWD----VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            +H   ++     D    V V  +LL MY + G    A ++F+ M VR+  +W+A++ G+
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGF 309

Query: 220 CQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
              G  +EA  +  +M  +G+  + P +VAS L  CA   ++  G  +H  + K GL  +
Sbjct: 310 VLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTD 369

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           L   N+L++MYAK G++  A  +FDQM+ +D VS++++++ Y Q+     A   F  MQ 
Sbjct: 370 LTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQA 429

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             +QPD+ T+VSL    + L   ++ +  HG ++ RG   E  I  NA++DMYAK G I+
Sbjct: 430 CNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSIC-NALIDMYAKCGRID 488

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            +  +F+ +P +D++SWNT+I GY  +GL  EA  +F  M+      P+  T++ ++ A 
Sbjct: 489 LSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKH-QACEPDDVTFICLISAC 547

Query: 459 SHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP- 516
           SH G + +G +  H    K  +   +     +VD+  + G +D+A      +P  + V  
Sbjct: 548 SHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRV 607

Query: 517 WNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
           W A++    +H     G +  +  +Q+  EG       FV L    S +G   E      
Sbjct: 608 WGALLGACRVHKNIDLGKQVSSMIQQLGPEGTG----NFVLLSNIFSAAGRFDEAAE-VR 662

Query: 574 MMQEEFGIKPHLKHYGC 590
           ++Q+E G K   K  GC
Sbjct: 663 IIQKEQGFK---KSPGC 676



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 2/137 (1%)

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG +  A  LF Q+P      +NA+I  + + G       +         +P++ TF  +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           L ACS + L     R  H      G+   L     +VD++ +      A    + MP R 
Sbjct: 136 LKACS-ALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR- 193

Query: 616 DASIWGALLGACRIHGN 632
           D   W A+L    +HG 
Sbjct: 194 DVVAWNAMLAGYALHGK 210


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 301/777 (38%), Positives = 451/777 (58%), Gaps = 44/777 (5%)

Query: 86  VNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ---------- 135
           VN Y+       +R      S  ++ +W+++IS YV+ GR  EA+  +Y+          
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 136 FTLTS-----------------------------GLRPDFYTFPPVLKACRNLVD---GK 163
           FT +S                             G+ P+ ++   VL AC  L D   G 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           K+H  ++KLG++ D F A +LL MY + G    A  +F ++P  D  SWNA+I+G     
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               AL +L +M    V+    T++S L  CA    +  G  +H  ++K  +E + FV  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K G+++ A  VFD M  +DV+ WNSII+ Y      I A   FT M + G++ 
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           +  TL ++    A          VH   ++ G +  D  + N+++D Y K  ++  A  V
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSG-YQYDGYVANSLLDSYGKCCLLEDAAKV 447

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE  P +D++++ ++IT Y+Q GL  EA++++  M++  +I P+   + S+  A +++ A
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQD-RDIKPDAFIFSSLFNACANLSA 506

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
             QG +IH  V+K  L  DVF    LV+MY KCG IDDA  +F ++     V W+A+I  
Sbjct: 507 YEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGG 566

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG G KAL  F QML  G+ P+HIT VS+L+AC+H+GLV+E +R+F +M++ FGI P
Sbjct: 567 LAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITP 626

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
             +HY CMVD+ GR G L  A   ++ MP +  A++WGALLGA RIH N+ELG  A++ L
Sbjct: 627 TQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEML 686

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
             ++ E  G ++L++NIYA+ G W+ V +VR   ++  +KK PG S IE+ +KV  F  G
Sbjct: 687 LTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVG 746

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R+HP+ ++IY +L +L  ++ S GYVP     L DVE+ EKE +L  HSE+LA+AFG+I
Sbjct: 747 DRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLI 806

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++PP +PI++ KNLRVC DCH   KFIS++  REIIVRD NRFHHF+DG CSCGDYW
Sbjct: 807 ATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 261/521 (50%), Gaps = 30/521 (5%)

Query: 21  QAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIK 77
           Q HR        S  ISP+       E     +  +C  L   ++  ++H  L+  G   
Sbjct: 169 QIHRVALVTEMISTGISPN-------EFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDS 221

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
             FS+  L++ YA  G    +   F  I   ++ +WN++I+  V    L E  D   +  
Sbjct: 222 DPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCV----LHEKNDLALKLL 277

Query: 138 LTSG---LRPDFYTFPPVLKACR--NLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
              G   + P  +T    LKAC    LV  G+++H +++K+  E D FV   L+ MY + 
Sbjct: 278 GKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKC 337

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           GL   AR +FD MP +D   WN++ISGY   G  +EA+ +   M  EG+  +  T+++IL
Sbjct: 338 GLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTIL 397

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
              A S        +H   +K G +++ +V+N+L++ Y K  ++  A +VF+     D+V
Sbjct: 398 KSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLV 457

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           ++ S+I AY Q      A   +  MQ   I+PD     SL +  A L+     + +H  +
Sbjct: 458 AYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHV 517

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G  + DV  GN++V+MYAK G I+ A  +F  +  + ++SW+ +I G AQ+G   +A
Sbjct: 518 LKCG-LLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKA 576

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----T 487
           +++F  M + N I PN  T VS+L A +H G + +  +    + K    F +        
Sbjct: 577 LQLFYQMLK-NGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK---LFGITPTQEHYA 632

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           C+VD+ G+ GR+D+AM L  ++P ++S+  W A++    IH
Sbjct: 633 CMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIH 673



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 259/532 (48%), Gaps = 60/532 (11%)

Query: 149 FPPVL---KACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +P +L    A +++  G  IH  +++LG    + +   L+++Y +     VARKL  D  
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIRLGL---LGLRNRLVNLYSKCQCFRVARKLVIDSS 109

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI----- 260
             D  SW+A+ISGY Q+G   EAL    EM L G   +  T +S+L  C+ + N+     
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169

Query: 261 ---------------------LS--------------GLLIHLYIVKHGLEFNLFVSNNL 285
                                LS              G+ +H Y++K G + + F +N L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA--YEQSNDPITAHGFFTTMQQAGIQP 343
           ++MYAK G    A+ VF ++ + D+VSWN++IA     + ND   A      M    + P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKND--LALKLLGKMGSYRVAP 287

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACA 402
            + TL S     A +   +  R +H  +M+    ME D  +G  ++DMY+K G++  A  
Sbjct: 288 SMFTLSSALKACAAIGLVKLGRQLHSALMKMD--MEPDSFVGVGLIDMYSKCGLLQDARM 345

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF+ +P KDVI WN++I+GY+  G   EA+ +F  M +   +  NQ T  +IL   S  G
Sbjct: 346 VFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYK-EGLEFNQTTLSTILK--STAG 402

Query: 463 ALRQGI--KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +   G   ++H   IK+   +D +VA  L+D YGKC  ++DA  +F   P    V + ++
Sbjct: 403 SQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSM 462

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  +G G++AL  + +M D  ++PD   F SL  AC++     +G++  H+   + G
Sbjct: 463 ITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQ-IHVHVLKCG 521

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           +   +     +V+++ + G +  A      +  R   S W A++G    HG+
Sbjct: 522 LLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS-WSAMIGGLAQHGH 572



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 201/436 (46%), Gaps = 17/436 (3%)

Query: 54  FQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
            ++C  +  VK   +LH+ L+        F    L++ Y+  G L  +R  FD +  ++V
Sbjct: 296 LKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDV 355

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR-NLVDG--KKIHC 167
             WNS+IS Y  CG   EA+  F       GL  +  T   +LK+   +  +G  +++H 
Sbjct: 356 IVWNSIISGYSNCGYDIEAMSLFTNM-YKEGLEFNQTTLSTILKSTAGSQANGFCEQVHT 414

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             +K G+++D +VA SLL  Y +  L   A K+F+  P  D  ++ +MI+ Y Q G   E
Sbjct: 415 ISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEE 474

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL +   M+   +  D    +S+   CA       G  IH++++K GL  ++F  N+L+N
Sbjct: 475 ALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVN 534

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK G +  A  +F+++  R +VSW+++I    Q      A   F  M + GI P+ +T
Sbjct: 535 MYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHIT 594

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           LVS+ S          +R   G + +             +VD+  ++G ++ A  + + +
Sbjct: 595 LVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654

Query: 408 PVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           P +     W  L+     +    L   A E+   +E         GT++ +   Y+  G 
Sbjct: 655 PFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEP-----EKSGTHILLANIYASTGM 709

Query: 464 LRQGIKIHARVIKNCL 479
                K+  R +KN L
Sbjct: 710 WDNVAKVR-RSMKNSL 724



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 43/225 (19%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y  +L  ++    +  G+ IHAR+I+      + +   LV++Y KC     A  L     
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
               V W+A+IS +  +G+G++AL  + +M   G + +  TF S+L  CS +  +  G++
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169

Query: 571 YFH----------------------------MMQEEFGIKPH--LKHYG---------CM 591
                                          +  E +G+K H  L   G          +
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +D++ ++G    A      +P +PD   W A++  C +H   +L 
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVLHEKNDLA 273


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/738 (38%), Positives = 425/738 (57%), Gaps = 72/738 (9%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KLV+FYA  GDL   R  FD +  +NVY WN M+S Y + G   E++ C ++  +  G  
Sbjct: 1   KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKG-- 57

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
                           ++GK+                             +  A +LFD 
Sbjct: 58  ----------------IEGKR-----------------------------SESASELFDK 72

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           +  RD  SWN+MISGY  +G     L I  +M   G+ +D  T+ S+L  CA+S  +  G
Sbjct: 73  LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLG 132

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +H   +K   E  +  SN L++MY+K G +  ALRVF++M ER+VVSW S+IA Y + 
Sbjct: 133 KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRD 192

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                A      M++ G++ D++ + S+    A+     N + VH +I +      ++ +
Sbjct: 193 GWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMASNLFV 251

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            NA++DMYAK G +  A +VF  + VKD+ISWNT++                       E
Sbjct: 252 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV----------------------GE 289

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + P+  T   ILPA + + AL +G +IH  +++N    D  VA  LVD+Y KCG +  A 
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            LF  +P    V W  +I+ +G+HG G++A+  F +M D G+ PD ++F+S+L ACSHSG
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           L+ +G R+F++M+ +F I+P L+HY CMVDL  R G+L  A+ FI+ +P+ PDA+IWGAL
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           L  CRI+ ++EL    ++R+FE++ EN GYYVL++NIYA   KWE V  +R     +GL+
Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 529

Query: 684 KTPGWSSIEVNNKVDIFYTGNR-THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           K PG S IE+  +V++F +GN  +HP  +KI   L+ +  KMK  GY P   + L + +E
Sbjct: 530 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADE 589

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
            +KE  L  HSE+LA+AFG+++ PP+  I++ KNLRVCGDCH   KF+S+ T REI++RD
Sbjct: 590 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 649

Query: 803 SNRFHHFKDGICSCGDYW 820
           SNRFHHFKDG CSC  +W
Sbjct: 650 SNRFHHFKDGYCSCRGFW 667



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 196/430 (45%), Gaps = 48/430 (11%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H+L + S   + +  S  L++ Y+  GDL  +   F+ +  RNV +W SMI+ Y R 
Sbjct: 133 KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRD 192

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFV 180
           G    A+    Q     G++ D      +L AC    +L +GK +H  +       ++FV
Sbjct: 193 GWSDGAIILLQQME-KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 251

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY + G    A  +F  M V+D  SWN M+                       +
Sbjct: 252 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------------EL 290

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T+A ILP CA    +  G  IH YI+++G   +  V+N L+++Y K G++  A  
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD +  +D+VSW  +IA Y        A   F  M+ AGI+PD ++ +S+      L  
Sbjct: 351 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI------LYA 404

Query: 361 CRNSRSVHG-----FIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVI 413
           C +S  +       +IM+  + +E  +   A +VD+ ++ G ++ A    E LP+  D  
Sbjct: 405 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDAT 464

Query: 414 SWNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            W  L+ G   Y    LA +  E VF++  E      N G YV +   Y+      +  +
Sbjct: 465 IWGALLCGCRIYHDIELAEKVAERVFELEPE------NTGYYVLLANIYAEAEKWEEVKR 518

Query: 470 IHARVIKNCL 479
           +  ++ K  L
Sbjct: 519 MREKIGKKGL 528



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 35/289 (12%)

Query: 41  LENESREID---FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           +E E  ++D      +  +C +   L + K +H  +  +     +F    L++ YA  G 
Sbjct: 205 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGS 264

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +  +   F  +  +++ +WN+M+                        L+PD  T   +L 
Sbjct: 265 MEGANSVFSTMVVKDIISWNTMV----------------------GELKPDSRTMACILP 302

Query: 155 ACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           AC +L     GK+IH  +L+ G+  D  VA +L+ +Y + G+  +AR LFD +P +D  S
Sbjct: 303 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 362

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           W  MI+GY   G   EA+   +EMR  G+  D ++  SIL  C+ S  +  G     YI+
Sbjct: 363 WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF-FYIM 421

Query: 272 KH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSII 317
           K+   +E  L     ++++ ++ G +  A +  + + +  D   W +++
Sbjct: 422 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 23/196 (11%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S + L   K +H  ++ +G       +  LV+ Y   G L  +R  FD I  +++ +W  
Sbjct: 306 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 365

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 175
           MI+ Y   G  +EA+  F +    +G+ PD  +F  +L AC         H  +L+ G+ 
Sbjct: 366 MIAGYGMHGYGNEAIATFNEMR-DAGIEPDEVSFISILYACS--------HSGLLEQGWR 416

Query: 176 W------DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQS 222
           +      D  +   L H  C      R G  + A K  + +P+  D+  W A++ G C+ 
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG-CRI 475

Query: 223 GNAVEALDILDEMRLE 238
            + +E  + + E   E
Sbjct: 476 YHDIELAEKVAERVFE 491


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 287/744 (38%), Positives = 435/744 (58%), Gaps = 5/744 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K +FS   +++ Y++ GDL  ++H F    +RN  TW  M+  +   GR S+A+  F + 
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF-RA 130

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            L  G+ PD  T   VL      V    +H   +K G +  VFV  +LL  YC+ GL   
Sbjct: 131 MLGEGVIPDRVTVTTVLNLPGCTV--PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 188

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR++F +M  +D+ ++NAM+ G  + G   +AL +   MR  G+     T +SIL V A 
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
             ++L G  +H  +++     N+FV+N+L++ Y+K   +    R+FD+M ERD VS+N I
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IAAY  +    T    F  MQ+ G    +L   ++ S+   L D    + +H  ++  G 
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
             ED ++GNA++DMY+K G++++A + F     K  ISW  LITGY QNG   EA+++F 
Sbjct: 369 ASED-LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 427

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     + P++ T+ SI+ A S +  +  G ++H+ +I++     VF  + LVDMY KC
Sbjct: 428 DMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 486

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G +D+A+  F ++P  +S+ WNA+IS +  +G+   A+  F  ML  G  PD +TF+S+L
Sbjct: 487 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSH+GL  E  +YFH+M+ ++ I P  +HY C++D  GR G        +  MP + D
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 606

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
             IW ++L +CRIHGN EL  VA+D+LF ++  +   YV++SNIYA  G+WE    V+ +
Sbjct: 607 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 666

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            RDRG++K  G+S +E+  K+  F + + T P  ++I DEL  L  +M   GY PD +  
Sbjct: 667 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCA 726

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L  V+ + K   L  HSERLAIAF ++++P  +PI+I KNL  C DCH   K IS+I  R
Sbjct: 727 LHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNR 786

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           +IIVRDS RFHHFKDG+CSCGDYW
Sbjct: 787 DIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 180/360 (50%), Gaps = 7/360 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++HAL++ S  +  VF +  L++FY+    L   R  FD +  R+  ++N +I+ Y    
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA-WN 315

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
           + +  V   ++     G       +  +L    +L D   GK+IH  ++ LG   +  + 
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY + G+ + A+  F +   + + SW A+I+GY Q+G   EAL +  +MR  G+ 
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D  T +SI+   +    I  G  +H Y+++ G + ++F  + L++MYAK G +  ALR 
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M ER+ +SWN++I+AY    +   A   F  M   G  PD +T +S+ +  +  N  
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH-NGL 554

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
            +    +  +M+  + +       A V+D   ++G  +    +   +P K D I W +++
Sbjct: 555 ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 162/331 (48%), Gaps = 19/331 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   +H  K++HA LV+ G          L++ Y+  G L  ++  F + S ++  +W +
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           +I+ YV+ G+  EA+  F      +GLRPD  TF  ++KA  +L     G+++H  +++ 
Sbjct: 409 LITGYVQNGQHEEALQLFSDMR-RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 467

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G++  VF  + L+ MY + G  + A + FD+MP R+S SWNA+IS Y   G A  A+ + 
Sbjct: 468 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 527

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN--LINMYA 290
           + M   G + D +T  S+L  C+  + +    + + +++KH    + +  +   +I+   
Sbjct: 528 EGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586

Query: 291 KFGMMRHALRVFDQM-MERDVVSWNSIIAAYE----QSNDPITAHGFFTTMQQAGIQP-D 344
           + G      ++  +M  + D + W SI+ +      Q    + A   F      G++P D
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF------GMEPTD 640

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
               V L++I A+     ++  V   +  RG
Sbjct: 641 ATPYVILSNIYARAGQWEDAACVKKIMRDRG 671



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 172/396 (43%), Gaps = 40/396 (10%)

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-PIT 328
           +VK G +   +  N  +      G +  A  +FDQM  +++ S N I++AY  S D P  
Sbjct: 34  MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93

Query: 329 AHGF------------------------------FTTMQQAGIQPDLLTLVSLTSIVAQL 358
            H F                              F  M   G+ PD +T+ +    V  L
Sbjct: 94  QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTT----VLNL 149

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
             C    S+H F ++ G     V + N ++D Y K G++ +A  VF  +  KD +++N +
Sbjct: 150 PGC-TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 207

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           + G ++ GL ++A+++F  M     I     T+ SIL   + +  L  G ++HA V+++ 
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAG-IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              +VFV   L+D Y KC  +DD   LF ++P   +V +N II+ +  +      L  FR
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFR 326

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M   G     + + ++L+       V  G++  H      G+         ++D++ + 
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQ-IHAQLVLLGLASEDLLGNALIDMYSKC 385

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           G L  A +   N   +   S W AL+     +G  E
Sbjct: 386 GMLDAAKSNFSNRSEKSAIS-WTALITGYVQNGQHE 420


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/778 (36%), Positives = 453/778 (58%), Gaps = 10/778 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L Q C+    + H +R+H  +   G  +       L+  YA  G +  ++  F+ + 
Sbjct: 8   FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            ++V+ W  MI +Y + G    A+  FYQ      + P   T+  +L AC    +L DG 
Sbjct: 68  RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQ-EEDVMPTKVTYVAILNACASTESLKDGM 126

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  +L+ GFE DVFV  +L++MY + G    A   F  +  RD  SW AMI+   Q  
Sbjct: 127 EIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHD 186

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               A  +   M+L+GV  + IT+ ++         +  G  I+  +    +E ++ V N
Sbjct: 187 QFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMN 246

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           + +NM+   G++  A R+F+ M++RDVV+WN +I  Y Q+ +   A   F  +QQ GI+ 
Sbjct: 247 SAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKA 306

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +T V + ++   L      + +H  +   G +  DV++  A++ +Y +      A  +
Sbjct: 307 NDITFVLMLNVYTSLTSLAKGKVIHELVKEAG-YDRDVVVATALMSLYGRCEAPGQAWKI 365

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +  KDVI+W  +   YAQNG   EA+++FQ M+      P   T V++L   +H+ A
Sbjct: 366 FVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ-LEGRRPTSATLVAVLDTCAHLAA 424

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L++G +IH+ +I+N    ++ V T L++MYGKCG++ +A S+F ++ +   + WN+++  
Sbjct: 425 LQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGA 484

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  HG  D+ L  F QM  +G + D ++FVS+L+A SHSG V++G +YF  M ++F I P
Sbjct: 485 YAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITP 544

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMP-VRPDASIWGALLGACRIHGNMELGAVASDR 642
             + YGC+VDL GRAG +  A + +  +    PD  +W  LLGACR H   +    A+++
Sbjct: 545 TPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQ 604

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + E D  + G YV++SN+YA  G W+GV+ +R L R RG+KK PG SSIE+ N+V  F  
Sbjct: 605 VLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLE 664

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+R+HP+   IY EL  L ++M++ GY+PD   +L DVE++ KE +L  HSERLAIAFG+
Sbjct: 665 GDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGL 724

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S+PP +P+++ KNLRVC DCH  TK+IS++  REI+VRD++RFH+FKDG CSC DYW
Sbjct: 725 MSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 187/381 (49%), Gaps = 4/381 (1%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D     ++L  C+ + N+  G  +H ++   G E N  V  +LI MYA+ G +  A +VF
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           + +  +DV +W  +I  Y Q  D   A G F  MQ+  + P  +T V++ +  A     +
Sbjct: 64  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           +   +HG I+++G F  DV +G A+++MY K G +  A   F+ L  +DV+SW  +I   
Sbjct: 124 DGMEIHGQILQQG-FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 182

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            Q+   + A  +++ M + + + PN+ T  ++  AY     L +G  I++ V    +  D
Sbjct: 183 VQHDQFALARWLYRRM-QLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V V    ++M+G  G + DA  LF  +     V WN +I+ +  +    +A+  F ++  
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           +G++ + ITFV +L   +    +++G +  H + +E G    +     ++ L+GR    G
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360

Query: 603 MAHNFIQNMPVRPDASIWGAL 623
            A     +M  + D   W  +
Sbjct: 361 QAWKIFVDMGSK-DVITWTVM 380



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 23/353 (6%)

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD    V+L    +   +  + R VH  +  RG+   +++ G+ ++ MYA+ G +  A 
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGH-LIQMYAQCGSVPEAQ 60

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VFE L  KDV +W  +I  Y Q G    A+ +F  M+E  ++ P + TYV+IL A +  
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQE-EDVMPTKVTYVAILNACAST 119

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +L+ G++IH ++++     DVFV T L++MY KCG +  A   F ++     V W A+I
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           +    H Q   A   +R+M  +GV P+ IT  ++  A      +SEG+  + ++     +
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV-M 238

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG----------ACRIHG 631
           +  ++     +++FG AG LG A    ++M V  D   W  ++           A R+ G
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            ++   + ++ +          +VLM N+Y ++        +  L ++ G  +
Sbjct: 298 RLQQDGIKANDI---------TFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 341


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 288/763 (37%), Positives = 458/763 (60%), Gaps = 14/763 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H   +  G ++ V   T LV+ Y     +      FD +  +NV +W S+++ Y + 
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQN 171

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVL---KACRNLVDGKKIHCSVLKLGFEWDVFV 180
           G   +A+  F Q  L  G++P+ +TF  VL    A   +  G ++H  V+K G +  +FV
Sbjct: 172 GLNEQALKLFSQMQL-EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFV 230

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             S+++MY +  + + A+ +FD M  R++ SWN+MI+G+  +G  +EA ++   MRLEGV
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +     A+++ +CA    +     +H  ++K+G +F+L +   L+  Y+K   +  A +
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 301 VFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +F  M   ++VVSW +II+ Y Q+     A   F  M++ G++P+  T     S +   N
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTY----STILTAN 406

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
              +   +H  +++   +     +G A+ D Y+K+G  N A  +FE +  KD+++W+ ++
Sbjct: 407 AAVSPSQIHALVVKTN-YENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAML 465

Query: 420 TGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHARVIKN 477
           +GYAQ G    A+++F Q+ +E   + PN+ T+ S+L A  +   ++ QG + H+  IK+
Sbjct: 466 SGYAQMGDIEGAVKIFLQLAKE--GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 523

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
                + V++ LV MY K G I+ A  +F +      V WN++IS +  HG G K+L  F
Sbjct: 524 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 583

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +M  + +  D ITF+ +++AC+H+GLV+EGQRYF +M +++ I P ++HY CMVDL+ R
Sbjct: 584 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSR 643

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG L  A + I  MP    A+IW  LL ACR+H N++LG +A+++L  +  ++   YVL+
Sbjct: 644 AGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLL 703

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SNIYA  G W+   +VR L   + +KK  G+S IEV NK   F  G+ +HP+ ++IY +L
Sbjct: 704 SNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKL 763

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L+ ++K  GY PD  +VL DVEE+ KE IL+ HSERLAIAFG+I++PP +PIQI KNL
Sbjct: 764 EELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNL 823

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVCGDCH   K IS+I  R+I+VRDSNRFHHFK G CSCGDYW
Sbjct: 824 RVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 161/539 (29%), Positives = 271/539 (50%), Gaps = 14/539 (2%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           S+  FD    + +   N ++  + R  +  EA++ F      SG   D  +   VLK C 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLR-RSGSPTDGSSLSCVLKVCG 103

Query: 158 NLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
            L D   GK++HC  +K GF  DV V  SL+ MY +        ++FD+M V++  SW +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +++GY Q+G   +AL +  +M+LEG+  +P T A++L   A    +  G+ +H  ++K G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           L+  +FV N+++NMY+K  M+  A  VFD M  R+ VSWNS+IA +  +   + A   F 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M+  G++       ++  + A + +   ++ +H  +++ G    D+ I  A++  Y+K 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF-DLNIKTALMVAYSKC 342

Query: 395 GIINSACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYV 452
             I+ A  +F  +  V++V+SW  +I+GY QNG    A+ +F QM  E   + PN  TY 
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE--GVRPNHFTYS 400

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           +IL A + V       +IHA V+K        V T L D Y K G  ++A  +F  +   
Sbjct: 401 TILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEK 456

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             V W+A++S +   G  + A+  F Q+  EGV P+  TF S+L AC+      E  + F
Sbjct: 457 DIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQF 516

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           H    + G    L     +V ++ + G++  A+   +   V  D   W +++     HG
Sbjct: 517 HSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQHG 574


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 287/744 (38%), Positives = 435/744 (58%), Gaps = 5/744 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K +FS   +++ Y++ GDL  ++H F    +RN  TW  M+  +   GR S+A+  F + 
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF-RA 130

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            L  G+ PD  T   VL      V    +H   +K G +  VFV  +LL  YC+ GL   
Sbjct: 131 MLGEGVIPDRVTVTTVLNLPGCTV--PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 188

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR++F +M  +D+ ++NAM+ G  + G   +AL +   MR  G+     T +SIL V A 
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
             ++L G  +H  +++     N+FV+N+L++ Y+K   +    R+FD+M ERD VS+N I
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IAAY  +    T    F  MQ+ G    +L   ++ S+   L D    + +H  ++  G 
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
             ED ++GNA++DMY+K G++++A + F     K  ISW  LITGY QNG   EA+++F 
Sbjct: 369 ASED-LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 427

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     + P++ T+ SI+ A S +  +  G ++H+ +I++     VF  + LVDMY KC
Sbjct: 428 DMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 486

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G +D+A+  F ++P  +S+ WNA+IS +  +G+   A+  F  ML  G  PD +TF+S+L
Sbjct: 487 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 546

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSH+GL  E  +YFH+M+ ++ I P  +HY C++D  GR G        +  MP + D
Sbjct: 547 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 606

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
             IW ++L +CRIHGN EL  VA+D+LF ++  +   YV++SNIYA  G+WE    V+ +
Sbjct: 607 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 666

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            RDRG++K  G+S +E+  K+  F + + T P  ++I DEL  L  +M   GY PD +  
Sbjct: 667 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCA 726

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L  V+ + K   L  HSERLAIAF ++++P  +PI+I KNL  C DCH   K IS+I  R
Sbjct: 727 LHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNR 786

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           +IIVRDS RFHHFKDG+CSCGDYW
Sbjct: 787 DIIVRDSRRFHHFKDGVCSCGDYW 810



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 180/360 (50%), Gaps = 7/360 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++HAL++ S  +  VF +  L++FY+    L   R  FD +  R+  ++N +I+ Y    
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA-WN 315

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
           + +  V   ++     G       +  +L    +L D   GK+IH  ++ LG   +  + 
Sbjct: 316 QCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 375

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY + G+ + A+  F +   + + SW A+I+GY Q+G   EAL +  +MR  G+ 
Sbjct: 376 NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 435

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D  T +SI+   +    I  G  +H Y+++ G + ++F  + L++MYAK G +  ALR 
Sbjct: 436 PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 495

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M ER+ +SWN++I+AY    +   A   F  M   G  PD +T +S+ +  +  N  
Sbjct: 496 FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH-NGL 554

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
            +    +  +M+  + +       A V+D   ++G  +    +   +P K D I W +++
Sbjct: 555 ADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 614



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 162/331 (48%), Gaps = 19/331 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   +H  K++HA LV+ G          L++ Y+  G L  ++  F + S ++  +W +
Sbjct: 349 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 408

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           +I+ YV+ G+  EA+  F      +GLRPD  TF  ++KA  +L     G+++H  +++ 
Sbjct: 409 LITGYVQNGQHEEALQLFSDMR-RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 467

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G++  VF  + L+ MY + G  + A + FD+MP R+S SWNA+IS Y   G A  A+ + 
Sbjct: 468 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 527

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN--LINMYA 290
           + M   G + D +T  S+L  C+  + +    + + +++KH    + +  +   +I+   
Sbjct: 528 EGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 586

Query: 291 KFGMMRHALRVFDQM-MERDVVSWNSIIAAYE----QSNDPITAHGFFTTMQQAGIQP-D 344
           + G      ++  +M  + D + W SI+ +      Q    + A   F      G++P D
Sbjct: 587 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF------GMEPTD 640

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
               V L++I A+     ++  V   +  RG
Sbjct: 641 ATPYVILSNIYARAGQWEDAACVKKIMRDRG 671



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 172/396 (43%), Gaps = 40/396 (10%)

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-PIT 328
           +VK G +   +  N  +      G +  A  +FDQM  +++ S N I++AY  S D P  
Sbjct: 34  MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93

Query: 329 AHGF------------------------------FTTMQQAGIQPDLLTLVSLTSIVAQL 358
            H F                              F  M   G+ PD +T+ +    V  L
Sbjct: 94  QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTT----VLNL 149

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
             C    S+H F ++ G     V + N ++D Y K G++ +A  VF  +  KD +++N +
Sbjct: 150 PGC-TVPSLHPFAIKFG-LDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 207

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           + G ++ GL ++A+++F  M     I     T+ SIL   + +  L  G ++HA V+++ 
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAG-IPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST 266

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              +VFV   L+D Y KC  +DD   LF ++P   +V +N II+ +  +      L  FR
Sbjct: 267 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFR 326

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M   G     + + ++L+       V  G++  H      G+         ++D++ + 
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQ-IHAQLVLLGLASEDLLGNALIDMYSKC 385

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           G L  A +   N   +   S W AL+     +G  E
Sbjct: 386 GMLDAAKSNFSNRSEKSAIS-WTALITGYVQNGQHE 420


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/803 (36%), Positives = 464/803 (57%), Gaps = 78/803 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNVY 111
             +C  L    R+ + ++++G I   F++++L+ F  +     L +S   FD I   N +
Sbjct: 48  LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGF 107

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR-NLVD--GKKIHCS 168
            WN+M+  Y++     +A+   Y+  + + + PD YT+P V++AC   L++  GK+IH  
Sbjct: 108 MWNTMMRAYIQSNSAEKAL-LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDH 166

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           VLK+GF+ DV+V  +L++MY   G    ARKLFD+ PV DS SWN++++GY + G+  EA
Sbjct: 167 VLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEA 226

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
             I D+M                                        + N+  SN++I +
Sbjct: 227 KLIFDQMP---------------------------------------QRNIVASNSMIVL 247

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
             K G +  A ++F++M E+D+VSW+++I+ YEQ+     A   F  M   G++ D + +
Sbjct: 248 LGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVV 307

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA---------------- 392
           VS+ S  A L+  +  + +HG ++R G     V + NA++ MY+                
Sbjct: 308 VSVLSACAHLSIVKTGKMIHGLVIRMG-IESYVNLQNALIHMYSGSGEIMDAQKLFNGSH 366

Query: 393 ---------------KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
                          K G +  A A+F+ +P KD++SW+ +I+GYAQ+   SE + +F  
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE 426

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M+   +I P++   VS++ A +H+ AL QG  +HA + KN L  +V + T L+DMY KCG
Sbjct: 427 MQ-LGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCG 485

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            +++A+ +F  +       WNA+I    ++G  +++L+ F +M + GV P+ ITF+ +L 
Sbjct: 486 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLG 545

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           AC H GLV EG+ +F  M E+ GI+P++KHYGCMVDL GRAG L  A   I++MP+ PD 
Sbjct: 546 ACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDV 605

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
           + WGALLGAC+ HG+ E+G     +L E+  ++ G++VL+SNI+A+ G WE V EVR + 
Sbjct: 606 ATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMM 665

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           + +G+ KTPG S IE N  V  F  G++THP   K+   L  +  ++K  GY PD + V 
Sbjct: 666 KQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVS 725

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            D++E+EKE  L  HSE+LAIAFG+++  P +PI+I KNLR+C DCH   K IS+   RE
Sbjct: 726 LDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYARE 785

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           I+VRD +RFH+FK+G CSC DYW
Sbjct: 786 IVVRDRHRFHYFKEGACSCMDYW 808


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/793 (36%), Positives = 445/793 (56%), Gaps = 75/793 (9%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNF 88
           N++++   C ++E     +  + Q C  L  +   K++H+++  +          KLV+F
Sbjct: 84  NAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSF 143

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           YA  GDL   R  FD +  +NVY WN M+S Y + G   E++ C ++  +  G       
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKG------- 195

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
                      ++GK+                                A +LFD +  RD
Sbjct: 196 -----------IEGKR-----------------------------PESASELFDKLCDRD 215

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN+MISGY  +G     L I  +M   G+ +D  T+ S+L  CA S  +  G  +H 
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             +K   E  +  SN L++MY+K G +  ALRVF++M ER+VVSW S+IA Y +      
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDG 335

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A      M++ G++ D++ + S+    A+     N + VH +I +      ++ + NA++
Sbjct: 336 AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMASNLFVCNALM 394

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G +  A +VF  + VKD+ISWNT++                       E+ P+ 
Sbjct: 395 DMYAKCGSMEGANSVFSTMVVKDIISWNTMV----------------------GELKPDS 432

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T   ILPA + + AL +G +IH  +++N    D  VA  LVD+Y KCG +  A  LF  
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P    V W  +I+ +G+HG G++A+  F +M D G+ PD ++F+S+L ACSHSGL+ +G
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            R+F++M+ +F I+P L+HY CMVDL  R G+L  A+ FI+ +P+ PDA+IWGALL  CR
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCR 612

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           I+ ++EL    ++R+FE++ EN GYYVL++NIYA   K E V  +R     +GL+K PG 
Sbjct: 613 IYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGC 672

Query: 689 SSIEVNNKVDIFYTGNR-THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           S IE+  +V++F +GN  +HP  +KI   L+ +  KMK  GY P   + L + +E +KE 
Sbjct: 673 SWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEM 732

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
            L  HSE+LA+AFG+++ PP+  I++ KNLRVCGDCH   KF+S+ T REI++RDSNRFH
Sbjct: 733 ALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFH 792

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSC  +W
Sbjct: 793 HFKDGYCSCRGFW 805



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/552 (23%), Positives = 230/552 (41%), Gaps = 100/552 (18%)

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           CF   TL    + +F++            +G  IH   LK  F   +F +   + +    
Sbjct: 9   CFSPLTLNQNRKENFFSSQ----------NGCFIHKPSLKTTFFSPIFRSCIPVRIS--- 55

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
             A   R +  D  V D   +NA I  +CQ G+   A++++     +   ++  T  S+L
Sbjct: 56  --ATPTRTI--DHQVTD---YNAKILHFCQLGDLENAMELV--CMCQKSELETKTYGSVL 106

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM------ 305
            +CA   ++  G  +H  I  + +  +  +   L++ YA  G ++   RVFD M      
Sbjct: 107 QLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVY 166

Query: 306 ---------------------------------------------MERDVVSWNSIIAAY 320
                                                         +RDV+SWNS+I+ Y
Sbjct: 167 LWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGY 226

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             +       G +  M   GI  DL T++S+    A        ++VH   ++   F   
Sbjct: 227 VSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS-FERR 285

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +   N ++DMY+K G ++ A  VFE +  ++V+SW ++I GY ++G +  AI + Q ME+
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEK 345

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              +  +     SIL A +  G+L  G  +H  +  N +  ++FV   L+DMY KCG ++
Sbjct: 346 -EGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A S+F  +     + WN ++                       ++PD  T   +L AC+
Sbjct: 405 GANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILPACA 443

Query: 561 HSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
               +  G+  + ++++  +    H+ +   +VDL+ + G LG+A      +P + D   
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVAN--ALVDLYVKCGVLGLARLLFDMIPSK-DLVS 500

Query: 620 WGALLGACRIHG 631
           W  ++    +HG
Sbjct: 501 WTVMIAGYGMHG 512


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/738 (40%), Positives = 437/738 (59%), Gaps = 15/738 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G L+ +R  FD I   +   +N++I  Y   G    A+D  Y+  L   + P+ YTFP V
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAID-LYRSMLRFRVAPNKYTFPFV 106

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           LKAC  LVD   G+ IH      G   D+FV+ +L+ +Y R      AR +F  MP+RD 
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166

Query: 210 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
            +WNAM++GY   G    A+  +LD     G+  +  T+ S+LP+ A+   +  G  IH 
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 269 YIVKHGLEFN---LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           Y ++  LE N   + +   L++MYAK   + +A RVF  M  R+ V+W+++I  +   + 
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTS---IVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
              A   F  M   G+    L+  S+ S   + A L D      +H  I + G    D+ 
Sbjct: 287 MTEAFNLFKDMLVEGLC--FLSATSVASALRVCASLADLHMGTQLHALIAKSG-IHADLT 343

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
             N+++ MYAK G+IN A   F+ + VKD IS+  L++G  QNG A EA  VF+ M+ CN
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + P+  T VS++PA SH+ AL+ G   H  VI   L  +  +   L+DMY KCG+ID +
Sbjct: 404 -MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F ++P    V WN +I+ +GIHG G +A   F  M ++G  PD +TF+ L+ ACSHS
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV+EG+ +F  M  ++GI P ++HY CMVDL  R G L  A+ FIQ+MP++ D  +WGA
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LLGACRIH N++LG   S  + ++  E  G +VL+SNI++  G+++   EVR + + +G 
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK+PG+S IE+N  +  F  G+++HP    IY EL N+   +K LGY  D SFVLQD+EE
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEE 702

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
           +EKE  L  HSE+LAIAFG++S      I + KNLRVCGDCH   K+++ +  R IIVRD
Sbjct: 703 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 762

Query: 803 SNRFHHFKDGICSCGDYW 820
           +NRFHHFK+G CSCG++W
Sbjct: 763 TNRFHHFKNGQCSCGNFW 780



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 233/462 (50%), Gaps = 11/462 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           +F ST L++ Y        +R+ F  +  R+V  WN+M++ Y   G    A+        
Sbjct: 135 LFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194

Query: 139 TSGLRPDFYTFP---PVLKACRNLVDGKKIHCSVLKLGFEWD---VFVAASLLHMYCRFG 192
             GLRP+  T     P+L     L  G  IH   L+   E +   V +  +LL MY +  
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASIL 251
               A ++F  MPVR+  +W+A+I G+       EA ++  +M +EG+  +   +VAS L
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            VCA   ++  G  +H  I K G+  +L  SN+L++MYAK G++  A   FD++  +D +
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           S+ ++++   Q+     A   F  MQ   ++PD+ T+VSL    + L   ++ +  HG +
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           + RG  +E  I  N+++DMYAK G I+ +  VF+ +P +DV+SWNT+I GY  +GL  EA
Sbjct: 435 IIRGLALETSIC-NSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLV 490
             +F  M+      P+  T++ ++ A SH G + +G         K  +   +    C+V
Sbjct: 494 TTLFLGMKN-QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 552

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGD 531
           D+  + G +D+A      +P  + V  W A++    IH   D
Sbjct: 553 DLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNID 594



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 225/453 (49%), Gaps = 11/453 (2%)

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           L  +   G   +AR++FD +P  D+ ++NA+I  Y   G    A+D+   M    V+ + 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY---AKFGMMRHALRV 301
            T   +L  C+   ++ +G  IH +    GL  +LFVS  LI++Y   A+FG  R+   V
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN---V 157

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLND 360
           F +M  RDVV+WN+++A Y        A      MQ   G++P+  TLVSL  ++AQ   
Sbjct: 158 FAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGA 217

Query: 361 CRNSRSVHGFIMRRGWFM--EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                S+H + +R       E V+IG A++DMYAK   +  AC VF G+PV++ ++W+ L
Sbjct: 218 LFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSAL 277

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G+      +EA  +F+ M        +  +  S L   + +  L  G ++HA + K+ 
Sbjct: 278 IGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSG 337

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +  D+  +  L+ MY K G I++A   F ++    ++ + A++S    +G+ ++A   F+
Sbjct: 338 IHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFK 397

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M    + PD  T VSL+ ACSH   +  G +  H      G+         ++D++ + 
Sbjct: 398 KMQACNMEPDIATMVSLIPACSHLAALQHG-KCSHGSVIIRGLALETSICNSLIDMYAKC 456

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           G + ++      MP R D   W  ++    IHG
Sbjct: 457 GKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG 488



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 23/175 (13%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H K  H  +++ G          L++ YA  G +  SR  FD +  R+V +WN+MI+ 
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW-DV 178
           Y   G   EA   F       G  PD  TF  ++ AC         H  ++  G  W D 
Sbjct: 484 YGIHGLGKEATTLFLGMK-NQGFAPDDVTFICLIAACS--------HSGLVTEGKHWFDT 534

Query: 179 F-----VAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 221
                 +   + H  C      R GL + A +    MP++ D   W A++ G C+
Sbjct: 535 MTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL-GACR 588


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 446/771 (57%), Gaps = 11/771 (1%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L  VK +H+  V +G    +     LV+ YA  G +  +R  FD +  R++++W  
Sbjct: 143 SAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTV 202

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-----KKIHCSVL 170
           MI    + GR  EA   F Q     G  P+  T+  +L A      G     K++H    
Sbjct: 203 MIGGLAQHGRGQEAFSLFLQME-RGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAG 261

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K GF  D+ V  +L+HMY + G  + AR +FD M  RD  SWNAMI G  Q+G   EA  
Sbjct: 262 KAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFT 321

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           I  +M+ EG   D  T  S+L     +        +H + V+ GL  +L V +  ++MY 
Sbjct: 322 IFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYI 381

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           + G +  A  +FD++  R+V +WN++I    Q      A   F  M++ G  PD  T V+
Sbjct: 382 RCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVN 441

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           + S           + VH + +  G  + D+ +GNA+V MYAK G    A  VF+ +  +
Sbjct: 442 ILSANVGEEALEWVKEVHSYAIDAG--LVDLRVGNALVHMYAKCGNTMYAKQVFDDMVER 499

Query: 411 DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +V +W  +I+G AQ+G   EA  +F QM+ E   I P+  TYVSIL A +  GAL    +
Sbjct: 500 NVTTWTVMISGLAQHGCGHEAFSLFLQMLREG--IVPDATTYVSILSACASTGALEWVKE 557

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H+  +   L  D+ V   LV MY KCG +DDA  +F  +       W  +I     HG+
Sbjct: 558 VHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGR 617

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G  AL+ F +M  EG +P+  +FV++L+ACSH+GLV EG+R F  + +++GI+P ++HY 
Sbjct: 618 GLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYT 677

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GRAG L  A +FI NMP+ P  + WGALLGAC  +GN+E+   A+    ++  +
Sbjct: 678 CMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPK 737

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           +   YVL+SNIYA  G WE    VRS+ + RG++K PG S IEV+N++  F  G+ +HP+
Sbjct: 738 SASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPE 797

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            ++IY +L++L  ++K+ GYVPD   VL++ +++ KE  L SHSE+LAI +G++ +P ++
Sbjct: 798 SKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRN 857

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PI+++KNLRVC DCH  TKFIS++T REI+ RD+ RFHHFKDG+CSCGDYW
Sbjct: 858 PIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 209/661 (31%), Positives = 310/661 (46%), Gaps = 32/661 (4%)

Query: 43  NESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR 99
            +  EI +  + ++C     L   K++HA ++ SG    V   T LVN Y   G +  ++
Sbjct: 26  GQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQ 85

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
             FD +  RNV +W  MI      GR  EA   F Q     G  P+ YT+  +L A  N 
Sbjct: 86  LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQ-REGFIPNSYTYVSILNA--NA 142

Query: 160 VDG-----KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
             G     K++H   +  G   D+ V  +L+HMY + G  + AR +FD M  RD  SW  
Sbjct: 143 SAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTV 202

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL-----IHLY 269
           MI G  Q G   EA  +  +M   G   +  T  SIL   A +    +G L     +H +
Sbjct: 203 MIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITS---TGALEWVKEVHKH 259

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
             K G   +L V N LI+MYAK G +  A  VFD M +RDV+SWN++I    Q+     A
Sbjct: 260 AGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEA 319

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  MQQ G  PD  T +SL +           + VH   +  G  + D+ +G+A V 
Sbjct: 320 FTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVG-LVSDLRVGSAFVH 378

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MY + G I+ A  +F+ L V++V +WN +I G AQ     EA+ +F  M       P+  
Sbjct: 379 MYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR-EGFFPDAT 437

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+V+IL A     AL    ++H+  I   L  D+ V   LV MY KCG    A  +F  +
Sbjct: 438 TFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDM 496

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
              +   W  +IS    HG G +A + F QML EG+ PD  T+VS+L+AC+ +G + E  
Sbjct: 497 VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGAL-EWV 555

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
           +  H      G+   L+    +V ++ + G +  A     +M  R D   W  ++G    
Sbjct: 556 KEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLER-DVYSWTVMIGGLAQ 614

Query: 630 HGNMELGAVASDRLFEVDSENV---GY-YVLMSNIYANVGKW-EGVDEVRSLARDRGLKK 684
           HG    G  A D   ++  E     GY +V + +  ++ G   EG  +  SL +D G++ 
Sbjct: 615 HGR---GLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEP 671

Query: 685 T 685
           T
Sbjct: 672 T 672



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 189/608 (31%), Positives = 296/608 (48%), Gaps = 17/608 (2%)

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           MI  Y   G   +A+  + Q     G +P+  T+  +LKAC + V    GKKIH  +++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF+ DV V  +L++MY + G  + A+ +FD M  R+  SW  MI G    G   EA    
Sbjct: 60  GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            +M+ EG   +  T  SIL   A +  +     +H + V  GL  +L V N L++MYAK 
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL- 351
           G +  A  VFD M+ERD+ SW  +I    Q      A   F  M++ G  P+L T +S+ 
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 352 -TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
             S +         + VH    + G F+ D+ +GNA++ MYAK G I+ A  VF+G+  +
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAG-FISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           DVISWN +I G AQNG   EA  +F  M++   + P+  TY+S+L  +   GA     ++
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV-PDSTTYLSLLNTHVSTGAWEWVKEV 357

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H   ++  L  D+ V +  V MY +CG IDDA  +F ++   +   WNA+I        G
Sbjct: 358 HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCG 417

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            +AL+ F QM  EG  PD  TFV++L+A      + E  +  H    + G+   L+    
Sbjct: 418 REALSLFLQMRREGFFPDATTFVNILSANVGEEAL-EWVKEVHSYAIDAGL-VDLRVGNA 475

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG-NMELGAVASDRLFEVDSE 649
           +V ++ + G+   A     +M V  + + W  ++     HG   E  ++    L E    
Sbjct: 476 LVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP 534

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           +   YV + +  A+ G  E V EV S A + GL      S + V N +   Y    +   
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLV-----SDLRVGNALVHMYAKCGSVDD 589

Query: 710 YEKIYDEL 717
             +++D++
Sbjct: 590 ARRVFDDM 597



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/519 (31%), Positives = 251/519 (48%), Gaps = 29/519 (5%)

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           MI GY + G A +A+ +  +MR EG   + IT  SIL  C    ++  G  IH +I++ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
            + ++ V   L+NMY K G +  A  +FD+M+ER+V+SW  +I           A   F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            MQ+ G  P+  T VS+ +  A        + VH   +  G  + D+ +GNA+V MYAK 
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL-DLRVGNALVHMYAKS 179

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I+ A  VF+G+  +D+ SW  +I G AQ+G   EA  +F  ME    + PN  TY+SI
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL-PNLTTYLSI 238

Query: 455 L--PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           L   A +  GAL    ++H    K     D+ V   L+ MY KCG IDDA  +F  +   
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             + WNA+I     +G G +A   F +M  EG  PD  T++SLL     +G   E  +  
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG-AWEWVKEV 357

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           H    E G+   L+     V ++ R G +  A      + VR + + W A++G       
Sbjct: 358 HKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGV---AQ 413

Query: 633 MELGAVASDRLFEVDSENVGYY----VLMSNIYANVGK--WEGVDEVRSLARDRGLKKTP 686
            + G  A     ++  E  G++      ++ + ANVG+   E V EV S A D GL    
Sbjct: 414 QKCGREALSLFLQMRRE--GFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL---- 467

Query: 687 GWSSIEVNNKVDIFYT--GNRTHPKYEKIYDEL--RNLT 721
               + V N +   Y   GN  + K  +++D++  RN+T
Sbjct: 468 --VDLRVGNALVHMYAKCGNTMYAK--QVFDDMVERNVT 502


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 288/726 (39%), Positives = 437/726 (60%), Gaps = 12/726 (1%)

Query: 102  FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
            FD  S  N++ WN  ++ ++  G++  A+DCF    L S +  D  T   +L A     D
Sbjct: 853  FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTL-LRSTIGHDSVTLVIILSAAVGADD 909

Query: 162  ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
               G++IH  V+K  F   V V+ SL++MY + G+   A K F + P  D  SWN MIS 
Sbjct: 910  LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969

Query: 219  YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN---ILSGLLIHLYIVKHGL 275
            Y Q+   +EA+    ++  +G+  D  T+AS+L  C+  D       G  +H+Y +K G+
Sbjct: 970  YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029

Query: 276  EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
              + FVS  LI++Y+K G M  A  +     + D+ SWN+I+  Y +SN    A   F+ 
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089

Query: 336  MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
            M + GI  D +TL +       L + +  + +  + ++ G F  D+ + + V+DMY K G
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVSSGVLDMYIKCG 1148

Query: 396  IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
             + +A  +F  +   D ++W T+I+GY +NG    A+ V+ +M   + + P++ T+ +++
Sbjct: 1149 DMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR-VSGVQPDEYTFATLI 1207

Query: 456  PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
             A S + AL QG +IHA V+K     D FV T LVDMY KCG + DA  +F ++     V
Sbjct: 1208 KASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267

Query: 516  PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
             WNA++     HG  D+ALN FR M   G++PD +TF+ +L+ACSHSGL SE  +YF  M
Sbjct: 1268 FWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAM 1327

Query: 576  QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
             + +GI P ++HY C+VD  GRAG +  A N I +MP +  AS++ ALLGACR  G+ E 
Sbjct: 1328 FKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAET 1387

Query: 636  GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
                +D+L  +D  +   YVL+SNIYA   +W+ V + R++ + + +KK PG+S I+V N
Sbjct: 1388 AKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKN 1447

Query: 696  KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG-YVPDKSFVLQDVEEDEKEHILTSHSE 754
            KV +F   +R+HP+   IY+++ +L  +++  G YVPD  F L DVEE+EKE  L  HSE
Sbjct: 1448 KVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSE 1507

Query: 755  RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
            +LAIAFG+IS+PP + I++ KNLRVCGDCH+  K IS++T+REI++RD+NRFHHF++G C
Sbjct: 1508 KLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTC 1567

Query: 815  SCGDYW 820
            SCGDYW
Sbjct: 1568 SCGDYW 1573



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 263/573 (45%), Gaps = 43/573 (7%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            KR HA +V SG +   + +  L+  Y+  G L  +R  FD  S R++ TWNS+++ Y + 
Sbjct: 631  KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQF 690

Query: 124  GRLS--EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-----KKIHCSVLKLGFEW 176
               S    ++ F  F L                    L+ G     + +H   +K+GFE 
Sbjct: 691  ADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL 750

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D+FV+ +L+++YC++GL   AR LFD MP RD+  WN M+  Y ++    EAL       
Sbjct: 751  DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              G   D                       +L+ V  G+  N  VSNN      +  +  
Sbjct: 811  RSGFXPD---------------------FSNLHCVIGGV--NSDVSNNRKRHAEQ--VKA 845

Query: 297  HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            +A+++F      ++ +WN  +  +  +   + A   F T+ ++ I  D +TLV + S   
Sbjct: 846  YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905

Query: 357  QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
              +D      +H  +++   F   V + N++++MY+K G++ +A   F   P  D+ISWN
Sbjct: 906  GADDLDLGEQIHALVIKSS-FAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964

Query: 417  TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA---LRQGIKIHAR 473
            T+I+ YAQN L  EAI  F+ +   + + P+Q T  S+L A S          G ++H  
Sbjct: 965  TMISSYAQNNLEMEAICTFRDLLR-DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023

Query: 474  VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
             IK  +  D FV+T L+D+Y K G++D+A  L +         WNAI+  +    +  KA
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKA 1083

Query: 534  LNFFRQMLDEGVRPDHITFVSLLTACSHSG-LVSEGQ-RYFHMMQEEFGIKPHLKHYGCM 591
            L  F  M + G+  D IT   L TA   SG L++  Q +       + G    L     +
Sbjct: 1084 LEHFSLMHEMGIPIDEIT---LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 592  VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            +D++ + G +  A      +  RPD   W  ++
Sbjct: 1141 LDMYIKCGDMPNALELFGEIS-RPDEVAWTTMI 1172



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 225/487 (46%), Gaps = 55/487 (11%)

Query: 155  ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
            A  +L  GK+ H  ++  G   D ++  +L+ MY + G    AR++FD    RD  +WN+
Sbjct: 623  AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682

Query: 215  MISGYCQSG-----NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            +++ Y Q       N +E   +   +R  G S+  +T+A +L +C  S  +     +H Y
Sbjct: 683  ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 270  IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
             VK G E +LFVS  L+N+Y K+G++  A  +FD+M ERD V WN ++ AY +++    A
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 330  HGFFTTMQQAGIQPDLLTLVSLTSIVAQLN-DCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
              FF+   ++G  PD     +L  ++  +N D  N+R  H                   V
Sbjct: 803  LRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHA----------------EQV 843

Query: 389  DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
              Y        A  +F      ++ +WN  +T +   G    AI+ F+ +     I  + 
Sbjct: 844  KAY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST-IGHDS 894

Query: 449  GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
             T V IL A      L  G +IHA VIK+     V V+  L++MY K G +  A   F  
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954

Query: 509  VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
             P    + WN +IS +  +    +A+  FR +L +G++PD  T  S+L ACS      EG
Sbjct: 955  SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG 1011

Query: 569  QRYFHMMQEEFGIKPHLKHYGC-----------MVDLFGRAGHLGMAHNFIQNMPVRPDA 617
            + YF +     G + H+    C           ++DL+ + G +  A  F+ +     D 
Sbjct: 1012 E-YFTL-----GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE-FLLHGKYDFDL 1064

Query: 618  SIWGALL 624
            + W A++
Sbjct: 1065 ASWNAIM 1071



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 4/201 (1%)

Query: 60   LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            L   K++ A  +  G    ++ S+ +++ Y   GD+  +   F  IS  +   W +MIS 
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174

Query: 120  YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
            Y+  G    A+   Y     SG++PD YTF  ++KA   L     GK+IH +V+KL +  
Sbjct: 1175 YIENGDEDHALSV-YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D FV  SL+ MYC+ G    A ++F  M VR    WNAM+ G  Q G+  EAL++   M+
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 237  LEGVSMDPITVASILPVCARS 257
              G+  D +T   +L  C+ S
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHS 1314



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 7/168 (4%)

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L+ G + HAR++ +    D ++   L+ MY KCG +  A  +F +      V WN+I++ 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 524 HGIHGQGD-----KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +            +    F  + + G     +T   LL  C  SG V   +   H    +
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET-VHGYAVK 745

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G +  L   G +V+++ + G +G A      MP R DA +W  +L A
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/738 (40%), Positives = 437/738 (59%), Gaps = 15/738 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G L+ +R  FD I   +   +N++I  Y   G    A+D  Y+  L   + P+ YTFP V
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAID-LYRSMLRFRVAPNKYTFPFV 106

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           LKAC  LVD   G+ IH      G   D+FV+ +L+ +Y R      AR +F  MP+RD 
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDV 166

Query: 210 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
            +WNAM++GY   G    A+  +LD     G+  +  T+ S+LP+ A+   +  G  IH 
Sbjct: 167 VAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHA 226

Query: 269 YIVKHGLEFN---LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           Y ++  LE N   + +   L++MYAK   + +A RVF  M  R+ V+W+++I  +   + 
Sbjct: 227 YCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDR 286

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTS---IVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
              A   F  M   G+    L+  S+ S   + A L D      +H  I + G    D+ 
Sbjct: 287 MTEAFNLFKDMLVEGLC--FLSATSVASALRVCASLADLHMGTQLHALIAKSG-IHADLT 343

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
             N+++ MYAK G+IN A   F+ + VKD IS+  L++G  QNG A EA  VF+ M+ CN
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + P+  T VS++PA SH+ AL+ G   H  VI   L  +  +   L+DMY KCG+ID +
Sbjct: 404 -MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F ++P    V WN +I+ +GIHG G +A   F  M ++G  PD +TF+ L+ ACSHS
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV+EG+ +F  M  ++GI P ++HY CMVDL  R G L  A+ FIQ+MP++ D  +WGA
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LLGACRIH N++LG   S  + ++  E  G +VL+SNI++  G+++   EVR + + +G 
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK+PG+S IE+N  +  F  G+++HP    IY EL N+   +K LGY  D SFVLQD+EE
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEE 702

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
           +EKE  L  HSE+LAIAFG++S      I + KNLRVCGDCH   K+++ +  R IIVRD
Sbjct: 703 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 762

Query: 803 SNRFHHFKDGICSCGDYW 820
           +NRFHHFK+G CSCG++W
Sbjct: 763 TNRFHHFKNGQCSCGNFW 780



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 233/462 (50%), Gaps = 11/462 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           +F ST L++ Y        +R+ F  +  R+V  WN+M++ Y   G    A+        
Sbjct: 135 LFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194

Query: 139 TSGLRPDFYTFP---PVLKACRNLVDGKKIHCSVLKLGFEWD---VFVAASLLHMYCRFG 192
             GLRP+  T     P+L     L  G  IH   L+   E +   V +  +LL MY +  
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASIL 251
               A ++F  MPVR+  +W+A+I G+       EA ++  +M +EG+  +   +VAS L
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            VCA   ++  G  +H  I K G+  +L  SN+L++MYAK G++  A   FD++  +D +
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           S+ ++++   Q+     A   F  MQ   ++PD+ T+VSL    + L   ++ +  HG +
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           + RG  +E  I  N+++DMYAK G I+ +  VF+ +P +DV+SWNT+I GY  +GL  EA
Sbjct: 435 IIRGLALETSIC-NSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLV 490
             +F  M+      P+  T++ ++ A SH G + +G         K  +   +    C+V
Sbjct: 494 TTLFLGMKN-QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMV 552

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGD 531
           D+  + G +D+A      +P  + V  W A++    IH   D
Sbjct: 553 DLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNID 594



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 225/453 (49%), Gaps = 11/453 (2%)

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           L  +   G   +AR++FD +P  D+ ++NA+I  Y   G    A+D+   M    V+ + 
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY---AKFGMMRHALRV 301
            T   +L  C+   ++ +G  IH +    GL  +LFVS  LI++Y   A+FG  R+   V
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARN---V 157

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLND 360
           F +M  RDVV+WN+++A Y        A      MQ   G++P+  TLVSL  ++AQ   
Sbjct: 158 FAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGA 217

Query: 361 CRNSRSVHGFIMRRGWFM--EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                S+H + +R       E V+IG A++DMYAK   +  AC VF G+PV++ ++W+ L
Sbjct: 218 LFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSAL 277

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G+      +EA  +F+ M        +  +  S L   + +  L  G ++HA + K+ 
Sbjct: 278 IGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSG 337

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +  D+  +  L+ MY K G I++A   F ++    ++ + A++S    +G+ ++A   F+
Sbjct: 338 IHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFK 397

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M    + PD  T VSL+ ACSH   +  G +  H      G+         ++D++ + 
Sbjct: 398 KMQACNMEPDIATMVSLIPACSHLAALQHG-KCSHGSVIIRGLALETSICNSLIDMYAKC 456

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           G + ++      MP R D   W  ++    IHG
Sbjct: 457 GKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG 488



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 23/175 (13%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H K  H  +++ G          L++ YA  G +  SR  FD +  R+V +WN+MI+ 
Sbjct: 424 LQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG 483

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW--- 176
           Y   G   EA   F       G  PD  TF  ++ AC         H  ++  G  W   
Sbjct: 484 YGIHGLGKEATTLFLGMK-NQGFAPDDVTFICLIAACS--------HSGLVTEGKHWFDT 534

Query: 177 ---DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 221
                 +   + H  C      R GL + A +    MP++ D   W A++ G C+
Sbjct: 535 MTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL-GACR 588


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 288/726 (39%), Positives = 437/726 (60%), Gaps = 12/726 (1%)

Query: 102  FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
            FD  S  N++ WN  ++ ++  G++  A+DCF    L S +  D  T   +L A     D
Sbjct: 853  FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTL-LRSTIGHDSVTLVIILSAAVGADD 909

Query: 162  ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
               G++IH  V+K  F   V V+ SL++MY + G+   A K F + P  D  SWN MIS 
Sbjct: 910  LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969

Query: 219  YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN---ILSGLLIHLYIVKHGL 275
            Y Q+   +EA+    ++  +G+  D  T+AS+L  C+  D       G  +H+Y +K G+
Sbjct: 970  YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029

Query: 276  EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
              + FVS  LI++Y+K G M  A  +     + D+ SWN+I+  Y +SN    A   F+ 
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089

Query: 336  MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
            M + GI  D +TL +       L + +  + +  + ++ G F  D+ + + V+DMY K G
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVSSGVLDMYIKCG 1148

Query: 396  IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
             + +A  +F  +   D ++W T+I+GY +NG    A+ V+ +M   + + P++ T+ +++
Sbjct: 1149 DMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR-VSGVQPDEYTFATLI 1207

Query: 456  PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
             A S + AL QG +IHA V+K     D FV T LVDMY KCG + DA  +F ++     V
Sbjct: 1208 KASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVV 1267

Query: 516  PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
             WNA++     HG  D+ALN FR M   G++PD +TF+ +L+ACSHSGL SE  +YF  M
Sbjct: 1268 FWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAM 1327

Query: 576  QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
             + +GI P ++HY C+VD  GRAG +  A N I +MP +  AS++ ALLGACR  G+ E 
Sbjct: 1328 FKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAET 1387

Query: 636  GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
                +D+L  +D  +   YVL+SNIYA   +W+ V + R++ + + +KK PG+S I+V N
Sbjct: 1388 AKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKN 1447

Query: 696  KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG-YVPDKSFVLQDVEEDEKEHILTSHSE 754
            KV +F   +R+HP+   IY+++ +L  +++  G YVPD  F L DVEE+EKE  L  HSE
Sbjct: 1448 KVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSE 1507

Query: 755  RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
            +LAIAFG+IS+PP + I++ KNLRVCGDCH+  K IS++T+REI++RD+NRFHHF++G C
Sbjct: 1508 KLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTC 1567

Query: 815  SCGDYW 820
            SCGDYW
Sbjct: 1568 SCGDYW 1573



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 263/573 (45%), Gaps = 43/573 (7%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            KR HA +V SG +   + +  L+  Y+  G L  +R  FD  S R++ TWNS+++ Y + 
Sbjct: 631  KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQF 690

Query: 124  GRLS--EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-----KKIHCSVLKLGFEW 176
               S    ++ F  F L                    L+ G     + +H   +K+GFE 
Sbjct: 691  ADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFEL 750

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D+FV+ +L+++YC++GL   AR LFD MP RD+  WN M+  Y ++    EAL       
Sbjct: 751  DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFH 810

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              G   D                       +L+ V  G+  N  VSNN      +  +  
Sbjct: 811  RSGFFPD---------------------FSNLHCVIGGV--NSDVSNNRKRHAEQ--VKA 845

Query: 297  HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            +A+++F      ++ +WN  +  +  +   + A   F T+ ++ I  D +TLV + S   
Sbjct: 846  YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905

Query: 357  QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
              +D      +H  +++   F   V + N++++MY+K G++ +A   F   P  D+ISWN
Sbjct: 906  GADDLDLGEQIHALVIKSS-FAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964

Query: 417  TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA---LRQGIKIHAR 473
            T+I+ YAQN L  EAI  F+ +   + + P+Q T  S+L A S          G ++H  
Sbjct: 965  TMISSYAQNNLEMEAICTFRDLLR-DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023

Query: 474  VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
             IK  +  D FV+T L+D+Y K G++D+A  L +         WNAI+  +    +  KA
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKA 1083

Query: 534  LNFFRQMLDEGVRPDHITFVSLLTACSHSG-LVSEGQ-RYFHMMQEEFGIKPHLKHYGCM 591
            L  F  M + G+  D IT   L TA   SG L++  Q +       + G    L     +
Sbjct: 1084 LEHFSLMHEMGIPIDEIT---LATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 592  VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            +D++ + G +  A      +  RPD   W  ++
Sbjct: 1141 LDMYIKCGDMPNALELFGEIS-RPDEVAWTTMI 1172



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 225/487 (46%), Gaps = 55/487 (11%)

Query: 155  ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
            A  +L  GK+ H  ++  G   D ++  +L+ MY + G    AR++FD    RD  +WN+
Sbjct: 623  AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682

Query: 215  MISGYCQSG-----NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            +++ Y Q       N +E   +   +R  G S+  +T+A +L +C  S  +     +H Y
Sbjct: 683  ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 270  IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
             VK G E +LFVS  L+N+Y K+G++  A  +FD+M ERD V WN ++ AY +++    A
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 330  HGFFTTMQQAGIQPDLLTLVSLTSIVAQLN-DCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
              FF+   ++G  PD     +L  ++  +N D  N+R  H                   V
Sbjct: 803  LRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHA----------------EQV 843

Query: 389  DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
              Y        A  +F      ++ +WN  +T +   G    AI+ F+ +     I  + 
Sbjct: 844  KAY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST-IGHDS 894

Query: 449  GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
             T V IL A      L  G +IHA VIK+     V V+  L++MY K G +  A   F  
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN 954

Query: 509  VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
             P    + WN +IS +  +    +A+  FR +L +G++PD  T  S+L ACS      EG
Sbjct: 955  SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG 1011

Query: 569  QRYFHMMQEEFGIKPHLKHYGC-----------MVDLFGRAGHLGMAHNFIQNMPVRPDA 617
            + YF +     G + H+    C           ++DL+ + G +  A  F+ +     D 
Sbjct: 1012 E-YFTL-----GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE-FLLHGKYDFDL 1064

Query: 618  SIWGALL 624
            + W A++
Sbjct: 1065 ASWNAIM 1071



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 4/201 (1%)

Query: 60   LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            L   K++ A  +  G    ++ S+ +++ Y   GD+  +   F  IS  +   W +MIS 
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174

Query: 120  YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
            Y+  G    A+   Y     SG++PD YTF  ++KA   L     GK+IH +V+KL +  
Sbjct: 1175 YIENGDEDHALSV-YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL 1233

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D FV  SL+ MYC+ G    A ++F  M VR    WNAM+ G  Q G+  EAL++   M+
Sbjct: 1234 DHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQ 1293

Query: 237  LEGVSMDPITVASILPVCARS 257
              G+  D +T   +L  C+ S
Sbjct: 1294 SNGIQPDKVTFIGVLSACSHS 1314



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 7/168 (4%)

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L+ G + HAR++ +    D ++   L+ MY KCG +  A  +F +      V WN+I++ 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 524 HGIHGQGD-----KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +            +    F  + + G     +T   LL  C  SG V   +   H    +
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET-VHGYAVK 745

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G +  L   G +V+++ + G +G A      MP R DA +W  +L A
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792


>gi|255555443|ref|XP_002518758.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542139|gb|EEF43683.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 379

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 255/369 (69%), Positives = 307/369 (83%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY +FGL   ARKLFD+MP+RD GSWNAMISGYCQ+GN VE LDI+DEMR +GV+MD   
Sbjct: 1   MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFA 60

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           VASILPVCA+ +++LSG LIHL ++K GLEF+ FVSN LI MYAKFG +  A +VFD M+
Sbjct: 61  VASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHMV 120

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            RD+VSWNSIIAAYEQ++D  TA  FF  M+Q G++PDLLT++SL SIVAQLND +NSRS
Sbjct: 121 VRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSRS 180

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HGF+ RRGWFM+D +IGNAVVDMYAKLG   SA AVFE LPVKDVISWNTLITGYAQNG
Sbjct: 181 IHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQNG 240

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           LASEAIEV+ MMEEC E++P QGT+VSILPAYSH+GAL QG++ H  VIKN L  DVFV 
Sbjct: 241 LASEAIEVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVG 300

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           TCL+DMYGKCG++DDAMSLFY+VPR  +VPWNAIISCH +HG G+K +  FR+M+D+GV+
Sbjct: 301 TCLIDMYGKCGKLDDAMSLFYEVPRKDAVPWNAIISCHAVHGHGEKVIKLFREMIDDGVK 360

Query: 547 PDHITFVSL 555
           PD +  + +
Sbjct: 361 PDQLVAIQV 369



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 199/366 (54%), Gaps = 8/366 (2%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            YA  G +  +R  FD +  R+  +WN+MIS Y + G + E +D   +     G+  D +
Sbjct: 1   MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMR-KDGVAMDAF 59

Query: 148 TFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
               +L  C  L D   GK IH  V+KLG E+D FV+ +L+ MY +FG   +A+K+FD M
Sbjct: 60  AVASILPVCAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHM 119

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
            VRD  SWN++I+ Y Q+ +A  A    D+MR  GV  D +TV S+  + A+ ++  +  
Sbjct: 120 VVRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSR 179

Query: 265 LIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
            IH ++ + G    +  + N +++MYAK G    A  VF+++  +DV+SWN++I  Y Q+
Sbjct: 180 SIHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQN 239

Query: 324 NDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                A   +  M++   + P   T VS+    + L         HG +++    + DV 
Sbjct: 240 GLASEAIEVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHL-DVF 298

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G  ++DMY K G ++ A ++F  +P KD + WN +I+ +A +G   + I++F+ M + +
Sbjct: 299 VGTCLIDMYGKCGKLDDAMSLFYEVPRKDAVPWNAIISCHAVHGHGEKVIKLFREMID-D 357

Query: 443 EINPNQ 448
            + P+Q
Sbjct: 358 GVKPDQ 363



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 186/352 (52%), Gaps = 12/352 (3%)

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAKFG++  A ++FD+M  RD  SWN++I+ Y Q+ + +        M++ G+  D   
Sbjct: 1   MYAKFGLVGEARKLFDEMPIRDCGSWNAMISGYCQNGNVVEVLDIVDEMRKDGVAMDAFA 60

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           + S+  + A+LND  + + +H  +++ G    D  + NA++ MYAK G +  A  VF+ +
Sbjct: 61  VASILPVCAKLNDVLSGKLIHLLVIKLG-LEFDSFVSNALIAMYAKFGSLGLAQKVFDHM 119

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            V+D++SWN++I  Y QN  A+ A   F  M +   + P+  T +S+    + +   +  
Sbjct: 120 VVRDIVSWNSIIAAYEQNDDAATARSFFDKMRQIG-VRPDLLTVLSLASIVAQLNDHQNS 178

Query: 468 IKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
             IH  V +      D  +   +VDMY K G  + A ++F ++P    + WN +I+ +  
Sbjct: 179 RSIHGFVTRRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQ 238

Query: 527 HGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPH 584
           +G   +A+  +  M + + V P   T+VS+L A SH G + +G R + H+++       H
Sbjct: 239 NGLASEAIEVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSL----H 294

Query: 585 LKHY--GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           L  +   C++D++G+ G L  A +    +P R DA  W A++    +HG+ E
Sbjct: 295 LDVFVGTCLIDMYGKCGKLDDAMSLFYEVP-RKDAVPWNAIISCHAVHGHGE 345



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 157/309 (50%), Gaps = 9/309 (2%)

Query: 57  CTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           C KL+ V   K +H L++  G     F S  L+  YA  G L  ++  FDH+  R++ +W
Sbjct: 68  CAKLNDVLSGKLIHLLVIKLGLEFDSFVSNALIAMYAKFGSLGLAQKVFDHMVVRDIVSW 127

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           NS+I+ Y +    + A   F+      G+RPD  T   +      L D    + IH  V 
Sbjct: 128 NSIIAAYEQNDDAATA-RSFFDKMRQIGVRPDLLTVLSLASIVAQLNDHQNSRSIHGFVT 186

Query: 171 KLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           + G F  D  +  +++ MY + G    AR +F+ +PV+D  SWN +I+GY Q+G A EA+
Sbjct: 187 RRGWFMKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQNGLASEAI 246

Query: 230 DILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           ++ + M   + VS    T  SILP  +    +  G+  H +++K+ L  ++FV   LI+M
Sbjct: 247 EVYNMMEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVGTCLIDM 306

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G +  A+ +F ++  +D V WN+II+ +            F  M   G++PD L  
Sbjct: 307 YGKCGKLDDAMSLFYEVPRKDAVPWNAIISCHAVHGHGEKVIKLFREMIDDGVKPDQLVA 366

Query: 349 VSLTSIVAQ 357
           + + S++ +
Sbjct: 367 IQVWSVMVK 375



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 3/188 (1%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K       +V+ YA LG    +R  F+ +  ++V +WN++I+ Y + G  SEA++ +  
Sbjct: 192 MKDTVIGNAVVDMYAKLGATESARAVFERLPVKDVISWNTLITGYAQNGLASEAIEVYNM 251

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                 + P   T+  +L A  +L     G + H  V+K     DVFV   L+ MY + G
Sbjct: 252 MEECKEVSPTQGTWVSILPAYSHLGALHQGMRTHGHVIKNSLHLDVFVGTCLIDMYGKCG 311

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + A  LF ++P +D+  WNA+IS +   G+  + + +  EM  +GV  D +    +  
Sbjct: 312 KLDDAMSLFYEVPRKDAVPWNAIISCHAVHGHGEKVIKLFREMIDDGVKPDQLVAIQVWS 371

Query: 253 VCARSDNI 260
           V  +  ++
Sbjct: 372 VMVKDTSV 379


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 305/820 (37%), Positives = 459/820 (55%), Gaps = 72/820 (8%)

Query: 61  HHVKRLHALLVVSGKI------KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           H + R ++L   +G I      KT   S+ L +  A +G       T D      +  +N
Sbjct: 17  HQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDC----KITDYN 72

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF--YTFPPVLKAC---RNLVDGKKIHCSV 169
             I  +   G L  A++   Q       +PD    T+  VL+ C   +++ DG++IH  +
Sbjct: 73  IEICRFCELGNLRRAMELINQSP-----KPDLELRTYCSVLQLCADLKSIQDGRRIHSII 127

Query: 170 LKLGFEWDVFVAASLLHMYCRFG-----------LAN----------------------- 195
                E D  + + L+ MY   G           +AN                       
Sbjct: 128 QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESL 187

Query: 196 ---------------VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
                           ARKLFD++  RD  SWN+MISGY  +G + + LD+ ++M L G+
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           + D  T+ S++  C+ +  +L G  +H Y +K      L ++N L++MY+K G +  A++
Sbjct: 248 NTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQ 307

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+ M ER VVSW S+IA Y +      +   F  M++ GI PD+ T+ ++    A    
Sbjct: 308 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGL 367

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             N + VH +I +      D+ + NA++DMYAK G +  A +VF  + VKD++SWNT+I 
Sbjct: 368 LENGKDVHNYI-KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIG 426

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY++N L +EA+ +F  M+  ++  PN  T   ILPA + + AL +G +IH  +++N   
Sbjct: 427 GYSKNSLPNEALNLFVEMQYNSK--PNSITMACILPACASLAALERGQEIHGHILRNGFS 484

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  VA  LVDMY KCG +  A  LF  +P    V W  +I+ +G+HG G +A+  F +M
Sbjct: 485 LDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 544

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            + G+ PD ++F+S+L ACSHSGL+ EG  +F+MM+    I+P  +HY C+VDL  RAG+
Sbjct: 545 RNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGN 604

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A+ FI+ MP+ PDA+IWGALL  CRI+ +++L    ++ +FE++ EN GYYVL++NI
Sbjct: 605 LSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANI 664

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA   KWE V ++R     RGL+K PG S IE+  KV IF TG+ +HP   KI   L+  
Sbjct: 665 YAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKT 724

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             +MK  G+ P   + L   ++ EKE  L  HSE++A+AFGI+S PP   +++ KNLRVC
Sbjct: 725 RTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVC 784

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GDCH   KF+S++ +R+II+RDSNRFHHFKDG CSC  +W
Sbjct: 785 GDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 153/342 (44%), Gaps = 41/342 (11%)

Query: 56  SCTKL-HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           +CT L  + K +H  +  +     +F S  L++ YA  G +  +   F  +  +++ +WN
Sbjct: 363 ACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWN 422

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLK 171
           +MI  Y +    +EA++ F +    S  +P+  T   +L AC +L     G++IH  +L+
Sbjct: 423 TMIGGYSKNSLPNEALNLFVEMQYNS--KPNSITMACILPACASLAALERGQEIHGHILR 480

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
            GF  D  VA +L+ MY + G   +AR LFD +P +D  SW  MI+GY   G   EA+  
Sbjct: 481 NGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAA 540

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN------- 284
            +EMR  G+  D ++  SIL  C+      SGLL        G  F   + NN       
Sbjct: 541 FNEMRNSGIEPDEVSFISILYACSH-----SGLL------DEGWGFFNMMRNNCCIEPKS 589

Query: 285 -----LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND-----PITAHGFF 333
                ++++ A+ G +  A +    M +E D   W +++      +D      +  H F 
Sbjct: 590 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 649

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
              +  G        V L +I A+       + +   I RRG
Sbjct: 650 LEPENTGY------YVLLANIYAEAEKWEEVKKLRERIGRRG 685


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/793 (36%), Positives = 444/793 (55%), Gaps = 75/793 (9%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNF 88
           N++++   C ++E     +  + Q C  L      K++H+++  +          KLV+F
Sbjct: 84  NAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSF 143

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           YA  GDL   R  FD +  +NVY WN M+S Y + G   E++ C ++  +  G       
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKG------- 195

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
                      ++GK+                                A +LFD +  RD
Sbjct: 196 -----------IEGKR-----------------------------PESAFELFDKLCDRD 215

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN+MISGY  +G     L I  +M   G+ +D  T+ S+L  CA S  +  G  +H 
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             +K   E  +  SN L++MY+K G +  ALRVF++M ER+VVSW S+IA Y +      
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A      M++ G++ D++ + S+    A+     N + VH +I +      ++ + NA++
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALM 394

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G + +A +VF  + VKD+ISWNT+I                       E+ P+ 
Sbjct: 395 DMYAKCGSMEAANSVFSTMVVKDIISWNTMI----------------------GELKPDS 432

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T   +LPA + + AL +G +IH  +++N    D  VA  LVD+Y KCG +  A  LF  
Sbjct: 433 RTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P    V W  +I+ +G+HG G++A+  F +M D G+ PD ++F+S+L ACSHSGL+ +G
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            R+F++M+ +F I+P L+HY CMVDL  R G+L  A+ F++ +P+ PDA+IWGALL  CR
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCR 612

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
            + ++EL    ++R+FE++ EN GYYVL++NIYA   KWE V  +R     +GL+K PG 
Sbjct: 613 NYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGC 672

Query: 689 SSIEVNNKVDIFYTGNR-THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           S IE+  KV++F +GN  +HP  + I   L+ +  KMK  G+ P   + L + +E +KE 
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEM 732

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
            L  HSE+LA+AFG+++ PP+  I++ KNLRVCGDCH   KF+S+ T REI++RDSNRFH
Sbjct: 733 ALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFH 792

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSC  +W
Sbjct: 793 HFKDGYCSCRGFW 805



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 209/472 (44%), Gaps = 80/472 (16%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           +NA I  +CQ G+   A++++     +   ++  T  S+L +CA   +   G  +H  I 
Sbjct: 69  YNAKILHFCQLGDLENAMELI--CMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIK 126

Query: 272 KH--------GLEF-----------------------NLFVSNNLINMYAKFGMMRH--- 297
            +        GL+                        N+++ N +++ YAK G  +    
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 298 -----------------ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
                            A  +FD++ +RDV+SWNS+I+ Y  +       G +  M   G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I  DL T++S+    A        ++VH   ++   F   +   N ++DMY+K G ++ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS-FERRINFSNTLLDMYSKCGDLDGA 305

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE +  ++V+SW ++I GY ++G +  AI++ Q ME+   +  +     SIL A + 
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK-EGVKLDVVAITSILHACAR 364

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            G+L  G  +H  +  N +  ++FV   L+DMY KCG ++ A S+F  +     + WN +
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM 424

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEF 579
           I                       ++PD  T   +L AC+    +  G+  + ++++  +
Sbjct: 425 IG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGY 463

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               H+ +   +VDL+ + G LG+A      +P + D   W  ++    +HG
Sbjct: 464 SSDRHVAN--ALVDLYVKCGVLGLARLLFDMIPSK-DLVSWTVMIAGYGMHG 512



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 66/291 (22%)

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V  +N  I  + Q G    A+E+  M   C +      TY S+L   + + +   G K+H
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELICM---CQKSELETKTYGSVLQLCAGLKSFTDGKKVH 122

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCG---------------------------------- 497
           + +  N +  D  +   LV  Y  CG                                  
Sbjct: 123 SIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182

Query: 498 -----------------RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
                            R + A  LF ++     + WN++IS +  +G  ++ L  ++QM
Sbjct: 183 ESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +  G+  D  T +S+L  C++SG +S G +  H +  +   +  +     ++D++ + G 
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMYSKCGD 301

Query: 601 LGMAHNFIQNMPVRPDASIWGALL----------GACRIHGNMELGAVASD 641
           L  A    + M  R   S W +++          GA ++   ME   V  D
Sbjct: 302 LDGALRVFEKMGERNVVS-WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLD 351


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/683 (42%), Positives = 421/683 (61%), Gaps = 14/683 (2%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDV-FVAASLLHMYCRFGLANVARKLFDD---- 203
           +  +L+ C +L   K IH S+   GF        A L+ +Y + G  + AR LFD     
Sbjct: 28  YDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 204 ----MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
                   +S   N M+  Y  +G + EA+D+   M+  GV ++  T   +L VCA    
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELG 147

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
            + G ++H  +V+ G   +LFV   L++MYAK G +  A  VFD+M+ RDVV W ++I  
Sbjct: 148 AVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITL 207

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           YEQ+  P+ A   F  MQ+ G   D +T +S+ S V QL D R + SVHG+ +  G F+ 
Sbjct: 208 YEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNG-FIG 266

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           DV +GN++V MYAK G +  A  VF+ +  ++ ISWN++++GY QNG  ++A+ +F  M+
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             +E +PN  T + ++ A S++G+   G K+H  VI + +  D  +   ++DMY KCG +
Sbjct: 327 -ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDL 385

Query: 500 DDAMSLFY--QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           D A+ +F   ++       WN +IS +G+HG G +AL  F +M  EGV P+ ITF S+L+
Sbjct: 386 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 445

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSH+GL+ EG++ F  M +   ++P +KHY CMVD+ GRAG L  A   I+ +P RP  
Sbjct: 446 ACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 504

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            +WGALL ACRIHGN ELG +A++ LF+++ E+ GYYVLMSNIYA   KW+ V+ VR   
Sbjct: 505 EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNM 564

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           + RGLKK   +S IE   +V  F+T +++ P Y ++Y ++ +L  +MK +GYVPD S VL
Sbjct: 565 KSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVL 624

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            DVE ++KEH+L  HSE+LA+AFGI+      PIQ+ KNLRVC DCH   KFIS I  R+
Sbjct: 625 HDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRK 684

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           IIVRD NRFHHF+ G CSCGDYW
Sbjct: 685 IIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 172/526 (32%), Positives = 275/526 (52%), Gaps = 26/526 (4%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           +D L Q CT L  +K +H+ L   G  + T     +L+  Y+ LGDL  +R  FDH  + 
Sbjct: 28  YDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 109 --------NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
                   N +  N+M+  Y   GR  EA+D  Y +    G+  + +T+P VLK C +  
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAID-LYIYMQRMGVGVNNFTYPFVLKVCASEL 146

Query: 159 -LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             V G+ +H  V++ GF  D+FV A+L+ MY + G    A ++FD M +RD   W AMI+
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y Q+   ++AL +  +M+ EG   D IT  S+     +  +    + +H Y V +G   
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           ++ V N+++ MYAK G +  A  VFD+M ER+ +SWNS+++ Y Q+  P  A   F  MQ
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            +   P+ +T + + S  + L      R +H F++     + D  + NA++DMY K G +
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDI-DTTLRNAIMDMYMKCGDL 385

Query: 398 NSACAVFEG--LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           ++A  +F    L  +DV SWN LI+GY  +G   EA+E+F  M +   + PN  T+ SIL
Sbjct: 386 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM-QVEGVEPNDITFTSIL 444

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            A SH G + +G K  A + K  +  ++    C+VDM G+ G +++A  L  ++P R S 
Sbjct: 445 SACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 504

Query: 515 VPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLT 557
             W A++    IHG    G+ A N   Q+      P+H  +  L++
Sbjct: 505 EVWGALLLACRIHGNTELGEIAANNLFQL-----EPEHTGYYVLMS 545


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/771 (39%), Positives = 444/771 (57%), Gaps = 11/771 (1%)

Query: 56   SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
            S   L  VK +H+  V +G    +     LV+ YA  G +  +R  FD ++ R++++W  
Sbjct: 332  SAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTV 391

Query: 116  MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-----CRNLVDGKKIHCSVL 170
            MI    + GR  EA   F Q    +G  P+  T+  +L A        L   K +H    
Sbjct: 392  MIGGLAQHGRGQEAFSLFLQMQ-RNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAE 450

Query: 171  KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
            + GF  D+ +  +L+HMY + G  + AR +FD M  RD  SWNAM+ G  Q+G   EA  
Sbjct: 451  EAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFT 510

Query: 231  ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
            +  +M+ EG+  D  T  S+L     +D +     +H + V+ GL  +  V +  I+MY 
Sbjct: 511  VFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYI 570

Query: 291  KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
            + G +  A  +FD++  R V +WN++I    Q      A   F  MQ+ G  PD  T ++
Sbjct: 571  RCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFIN 630

Query: 351  LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
            + S           + VH      G  + D+ +GNA+V  Y+K G +  A  VF+ +  +
Sbjct: 631  ILSANVDEEALEWVKEVHSHATDAG--LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVER 688

Query: 411  DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            +V +W  +I G AQ+G   +A   F QM+ E   I P+  TYVSIL A +  GAL    +
Sbjct: 689  NVTTWTMMIGGLAQHGCGHDAFSHFLQMLRE--GIVPDATTYVSILSACASTGALEWVKE 746

Query: 470  IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
            +H   +   L  D+ V   LV MY KCG IDDA S+F  +       W  +I     HG+
Sbjct: 747  VHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGR 806

Query: 530  GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            G +AL+FF +M  EG +P+  ++V++LTACSH+GLV EG+R F  M +++GI+P ++HY 
Sbjct: 807  GLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYT 866

Query: 590  CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            CMVDL GRAG L  A  FI NMP+ PD + WGALLGAC  +GN+E+   A+    ++  +
Sbjct: 867  CMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPK 926

Query: 650  NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
            +   YVL+SNIYA  GKWE    VRS+ + +G++K PG S IEV+N++  F  G+ +HP+
Sbjct: 927  SASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPE 986

Query: 710  YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
             ++IY +L +L  ++K+ GYVPD   VL++ +++ KE  L SHSE+LAI +G++ +  K 
Sbjct: 987  SKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKD 1046

Query: 770  PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            PI+++KNLRVC DCH  TKFIS+IT REI+ RD+ RFHHFKDG+CSCGDYW
Sbjct: 1047 PIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 218/719 (30%), Positives = 340/719 (47%), Gaps = 50/719 (6%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           + ++ Q C K   +   K++H  ++ SG  + ++ + KL+  Y   G L  +R  FD + 
Sbjct: 121 YVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLL 180

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            +N+Y W +MI  Y   G   +A+  + +     G +P+  T+  +LKAC    NL  GK
Sbjct: 181 KKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPNEITYLSILKACCCPVNLKWGK 239

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           KIH  +++ GF+ DV V  +L++MY + G    A+ +FD M  R+  SW  MI G    G
Sbjct: 240 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYG 299

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EA  +  +M+ EG   +  T  SIL   A +  +     +H + V  GL  +L V N
Sbjct: 300 RGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGN 359

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L++MYAK G +  A  VFD M ERD+ SW  +I    Q      A   F  MQ+ G  P
Sbjct: 360 ALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLP 419

Query: 344 DLLTLVSL--TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +L T +S+   S +A  +     + VH      G F+ D+ IGNA++ MYAK G I+ A 
Sbjct: 420 NLTTYLSILNASAIASTSALEWVKVVHKHAEEAG-FISDLRIGNALIHMYAKCGSIDDAR 478

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+G+  +DVISWN ++ G AQNG   EA  VF  M++   + P+  TY+S+L  +   
Sbjct: 479 LVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQ-EGLVPDSTTYLSLLNTHGST 537

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL    ++H   ++  L  D  V +  + MY +CG IDDA  LF ++       WNA+I
Sbjct: 538 DALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMI 597

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
                   G +AL+ F QM  EG  PD  TF+++L+A      + E  +  H    + G+
Sbjct: 598 GGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL-EWVKEVHSHATDAGL 656

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
              L+    +V  + + G++  A     +M V  + + W  ++G    HG    G  A  
Sbjct: 657 -VDLRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHG---CGHDAFS 711

Query: 642 RLFEVDSENV----GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
              ++  E +      YV + +  A+ G  E V EV + A   GL      S + V N +
Sbjct: 712 HFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLV-----SDLRVGNAL 766

Query: 698 DIFYTGNRTHPKYEKIYDEL-------------------RNLTA-----KMKSLGYVPD 732
              Y    +      ++D++                   R L A     KMKS G+ P+
Sbjct: 767 VHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPN 825



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 179/609 (29%), Positives = 290/609 (47%), Gaps = 32/609 (5%)

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +  +  G+  D +++  +L+ C    +++  K++H  ++K G E +++VA  LL +Y R 
Sbjct: 107 KIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRC 166

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    AR++FD +  ++   W  MI GY + G+A +A+ + D+MR E    + IT  SIL
Sbjct: 167 GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSIL 226

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C    N+  G  IH +I++ G + ++ V   L+NMY K G +  A  +FD+M+ER+V+
Sbjct: 227 KACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVI 286

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SW  +I           A   F  MQ+ G  P+  T VS+ +  A        + VH   
Sbjct: 287 SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA 346

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           +  G  + D+ +GNA+V MYAK G I+ A  VF+G+  +D+ SW  +I G AQ+G   EA
Sbjct: 347 VNAGLAL-DLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEA 405

Query: 432 IEVFQMMEECNEINPNQGTYVSIL--PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
             +F  M+  N   PN  TY+SIL   A +   AL     +H    +     D+ +   L
Sbjct: 406 FSLFLQMQR-NGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNAL 464

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           + MY KCG IDDA  +F  +     + WNA++     +G G +A   F QM  EG+ PD 
Sbjct: 465 IHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDS 524

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
            T++SLL     +  + E     H    E G+    +     + ++ R G +  A     
Sbjct: 525 TTYLSLLNTHGSTDAL-EWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFD 583

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE------NVGYYVLMSNIYAN 663
            + VR   + W A++G          G  A     ++  E           +L +N+   
Sbjct: 584 KLSVR-HVTTWNAMIGGA---AQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEE 639

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT--GNRTHPKYEKIYDEL--RN 719
             +W  V EV S A D GL        + V N +   Y+  GN  + K  +++D++  RN
Sbjct: 640 ALEW--VKEVHSHATDAGL------VDLRVGNALVHTYSKCGNVKYAK--QVFDDMVERN 689

Query: 720 LTAKMKSLG 728
           +T     +G
Sbjct: 690 VTTWTMMIG 698



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 237/479 (49%), Gaps = 15/479 (3%)

Query: 213 NAMISGYC-QSGNAVEALDILDEMRL---EGVSMDPITVASILPVCARSDNILSGLLIHL 268
           NA + G   Q+ N + A D +  +++   +G+++D  +  +IL  C + ++IL    +H+
Sbjct: 83  NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            I+K G+E NL+V+N L+ +Y + G ++ A +VFD+++++++  W ++I  Y +      
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAED 202

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   +  M+Q   QP+ +T +S+        + +  + +H  I++ G F  DV +  A+V
Sbjct: 203 AMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSG-FQSDVRVETALV 261

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           +MY K G I  A  +F+ +  ++VISW  +I G A  G   EA  +F  M+    I PN 
Sbjct: 262 NMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI-PNS 320

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            TYVSIL A +  GAL    ++H+  +   L  D+ V   LV MY K G IDDA  +F  
Sbjct: 321 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 380

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS-E 567
           +       W  +I     HG+G +A + F QM   G  P+  T++S+L A + +   + E
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
             +  H   EE G    L+    ++ ++ + G +  A      M  R D   W A++G  
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDR-DVISWNAMMGGL 499

Query: 628 RIHGNMELGAVASDRLFEVDSENV----GYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
             +G    G  A     ++  E +      Y+ + N + +    E V+EV   A + GL
Sbjct: 500 AQNG---CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL 555


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 299/768 (38%), Positives = 448/768 (58%), Gaps = 24/768 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H   V  G +  V   T LV+ Y    +++  R  FD +  RNV +W S+++ Y   
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWN 172

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G      + F Q     G+ P+ YT   V+ A  N   +  G ++H  V+K GFE  + V
Sbjct: 173 GLYGYVWELFCQMQY-EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPV 231

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ +Y R G+   AR +FD M +RD  +WN+MI+GY ++G  +E  +I ++M+L GV
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGV 291

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
               +T AS++  CA    +    L+    +K G   +  V   L+   +K   M  AL 
Sbjct: 292 KPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALS 351

Query: 301 VFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI----- 354
           +F  M E ++VVSW ++I+   Q+     A   F+ M++ G++P+  T  ++ ++     
Sbjct: 352 LFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVF 411

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           V+++         H  +++   +     +G A++D Y KLG    A  VFE +  KD+++
Sbjct: 412 VSEM---------HAEVIKTN-YERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMA 461

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHA 472
           W+ ++ GYAQ G   EA ++F Q+++E   I PN+ T+ S++ A  S   A  QG + HA
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIKEG--IKPNEFTFSSVINACASPTAAAEQGKQFHA 519

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
             IK  L   + V++ LV MY K G ID A  +F +      V WN++IS +  HGQ  K
Sbjct: 520 YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKK 579

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL  F +M    +  D +TF+ ++TAC+H+GLV +GQ+YF+ M  +  I P +KHY CM+
Sbjct: 580 ALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMI 639

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DL+ RAG L  A   I  MP  P A++W  LLGA R+H N+ELG +A+++L  +  E+  
Sbjct: 640 DLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSA 699

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
            YVL+SN+YA  G W+    VR L   R +KK PG+S IEV NK   F  G+ THP   +
Sbjct: 700 AYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQ 759

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           IY +L  L+ ++K  GY PD   V  D+E+++KE IL+ HSERLAIAFG+I++PP+ PIQ
Sbjct: 760 IYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQ 819

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLRVCGDCHN+TK +S + +R I+VRDSNRFHHFKDG+CSCGDYW
Sbjct: 820 IVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 273/540 (50%), Gaps = 22/540 (4%)

Query: 102 FDHISYR--NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
           FD I +R   +   N ++  Y R  +  EA++ F    L S L+PD  T   V   C   
Sbjct: 48  FDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSL-LHSSLQPDESTLSCVFNICAGS 106

Query: 160 VDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           +DGK   ++HC  +K G    V V  SL+ MY +    N  R++FD+M  R+  SW +++
Sbjct: 107 LDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLL 166

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +GY  +G      ++  +M+ EGV  +  TV++++        +  GL +H  +VKHG E
Sbjct: 167 AGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFE 226

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + V N+LI++Y++ GM+R A  VFD+M  RD V+WNS+IA Y ++   +     F  M
Sbjct: 227 EAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM 286

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q AG++P  +T  S+    A L +    + +    ++ G F  D I+  A++   +K   
Sbjct: 287 QLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSG-FTTDQIVITALMVALSKCKE 345

Query: 397 INSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           ++ A ++F  +   K+V+SW  +I+G  QNG   +A+ +F  M     + PN  TY +IL
Sbjct: 346 MDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRR-EGVKPNHFTYSAIL 404

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
             +  V       ++HA VIK        V T L+D Y K G   DA+ +F  +     +
Sbjct: 405 TVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLM 460

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W+A+++ +   G+ ++A   F Q++ EG++P+  TF S++ AC+     +E  + FH  
Sbjct: 461 AWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFH-- 518

Query: 576 QEEFGIKPHLKHYGC----MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
              + IK  L +  C    +V ++ + G++  AH   +    R D   W +++     HG
Sbjct: 519 --AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKER-DLVSWNSMISGYSQHG 575



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 136/263 (51%), Gaps = 7/263 (2%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V  +HA ++ +   ++    T L++ Y  LG+   +   F+ I  +++  W++M++ Y +
Sbjct: 412 VSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQ 471

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV----DGKKIHCSVLKLGFEWDV 178
            G   EA   F+Q  +  G++P+ +TF  V+ AC +       GK+ H   +K+     +
Sbjct: 472 TGETEEAAKLFHQL-IKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNAL 530

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V+++L+ MY + G  + A ++F     RD  SWN+MISGY Q G A +AL++ DEM+  
Sbjct: 531 CVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKR 590

Query: 239 GVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            + +D +T   ++  C  +  +  G    +  I  H +   +   + +I++Y++ GM+  
Sbjct: 591 NMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEK 650

Query: 298 ALRVFDQM-MERDVVSWNSIIAA 319
           A+ + ++M        W +++ A
Sbjct: 651 AMGIINEMPFPPGATVWRTLLGA 673


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/793 (36%), Positives = 443/793 (55%), Gaps = 75/793 (9%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNF 88
           N++++   C ++E     +  + Q C  L      K++H+++  +          KLV+F
Sbjct: 84  NAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSF 143

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           YA  GDL   R  FD +  +NVY WN M+S Y + G   E++ C ++  +  G       
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI-CLFKIMVEKG------- 195

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
                      ++GK+                                A +LFD +  RD
Sbjct: 196 -----------IEGKR-----------------------------PESAFELFDKLCDRD 215

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN+MISGY  +G     L I  +M   G+ +D  T+ S+L  CA S  +  G  +H 
Sbjct: 216 VISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHS 275

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             +K   E  +  SN L++MY+K G +  ALRVF++M ER+VVSW S+IA Y +      
Sbjct: 276 LAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDG 335

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A      M++ G++ D++ + S+    A+     N + VH +I +      ++ + NA++
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI-KANNMESNLFVCNALM 394

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G + +A +VF  + VKD+ISWNT+I                       E+ P+ 
Sbjct: 395 DMYAKCGSMEAANSVFSTMVVKDIISWNTMI----------------------GELKPDS 432

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T   +LPA + + AL +G +IH  +++N    D  VA  LVD+Y KCG +  A  LF  
Sbjct: 433 RTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P    V W  +I+ +G+HG G++A+  F +M D G+ PD ++F+S+L ACSHSGL+ +G
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            R+F++M+ +F I+P L+HY CMVDL  R G+L  A+ FI+ +P+ PDA+IWGALL  CR
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
            + ++EL    ++R+FE++ EN GYYVL++NIYA   KWE V  +R     +GL+K PG 
Sbjct: 613 NYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGC 672

Query: 689 SSIEVNNKVDIFYTGNR-THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           S IE+  KV++F +GN  +HP  + I   L+ +  KMK  G+ P   + L + +E +KE 
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEM 732

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
            L  HSE+LA+AFG+++ PP+  I++ KNLRVCGDCH   KF+S+ T REI++RD NRFH
Sbjct: 733 ALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFH 792

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSC  +W
Sbjct: 793 HFKDGYCSCRGFW 805



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 210/472 (44%), Gaps = 80/472 (16%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           +NA I  +CQ G+   A++++     +   ++  T +S+L +CA   +   G  +H  I 
Sbjct: 69  YNAKILHFCQLGDLENAMELI--CMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIK 126

Query: 272 KH--------GLEF-----------------------NLFVSNNLINMYAKFGMMRH--- 297
            +        GL+                        N+++ N +++ YAK G  +    
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186

Query: 298 -----------------ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
                            A  +FD++ +RDV+SWNS+I+ Y  +       G +  M   G
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I  DL T++S+    A        ++VH   ++   F   +   N ++DMY+K G ++ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSS-FERRINFSNTLLDMYSKCGDLDGA 305

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE +  ++V+SW ++I GY ++G +  AI++ Q ME+   +  +     SIL A + 
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEK-EGVKLDVVAITSILHACAR 364

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            G+L  G  +H  +  N +  ++FV   L+DMY KCG ++ A S+F  +     + WN +
Sbjct: 365 SGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM 424

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEF 579
           I                       ++PD  T   +L AC+    +  G+  + ++++  +
Sbjct: 425 IG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGY 463

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               H+ +   +VDL+ + G LG+A      +P + D   W  ++    +HG
Sbjct: 464 SSDRHVAN--ALVDLYVKCGVLGLARLLFDMIPSK-DLVSWTVMIAGYGMHG 512



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/291 (20%), Positives = 109/291 (37%), Gaps = 66/291 (22%)

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V  +N  I  + Q G    A+E+  M   C +      TY S+L   + + +   G K+H
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELICM---CKKSELETKTYSSVLQLCAGLKSFTDGKKVH 122

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCG---------------------------------- 497
           + +  N +  D  +   LV  Y  CG                                  
Sbjct: 123 SIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182

Query: 498 -----------------RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
                            R + A  LF ++     + WN++IS +  +G  ++ L  ++QM
Sbjct: 183 ESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +  G+  D  T +S+L  C++SG +S G +  H +  +   +  +     ++D++ + G 
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLG-KAVHSLAIKSSFERRINFSNTLLDMYSKCGD 301

Query: 601 LGMAHNFIQNMPVRPDASIWGALL----------GACRIHGNMELGAVASD 641
           L  A    + M  R   S W +++          GA ++   ME   V  D
Sbjct: 302 LDGALRVFEKMGERNVVS-WTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLD 351


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/777 (36%), Positives = 436/777 (56%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  +CTK       + +HA +         F    L+  Y   G    +   F  + 
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           + +  T+N++IS + +CG    A+  F +  L SGLRPD  T   +L AC ++ D   GK
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQL-SGLRPDCVTVASLLAACASVGDLQKGK 265

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  +LK G  +D     SLL +Y + G    A  +F+     +   WN M+  Y Q  
Sbjct: 266 QLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ +I  +M+  G+  +  T   IL  C  +  I  G  IH   +K+G E +++VS 
Sbjct: 326 DLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+  +  A ++ + + +RDVVSW S+IA Y Q +    A   F  MQ  G+ P
Sbjct: 386 VLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +   R    +H  +   G +  D+ I N +V++YA+ G    A ++
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSG-YAADISIWNTLVNLYARCGRSEEAFSL 504

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +  KD I+WN LI+G+ Q+ L  +A+ VF  M +      N  T++S + A +++  
Sbjct: 505 FREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA-KYNVFTFISAISALANLAD 563

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG ++H R +K     +  VA  L+ +YGKCG I+DA  +F ++   + V WN II+ 
Sbjct: 564 IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS 623

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+G +AL+ F QM  EG++P+ +TF+ +L ACSH GLV EG  YF  M   +G+ P
Sbjct: 624 CSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNP 683

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C+VD+ GRAG L  A  F+  MP+  +A IW  LL AC++H N+E+G +A+  L
Sbjct: 684 IPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHL 743

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA  GKW   D+VR + +DRG++K PG S IEV N V  F+ G
Sbjct: 744 LELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVG 803

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  ++IY  L  L  ++  +GY  +   +  + E+++K+     HSE+LA+AFG++
Sbjct: 804 DRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLM 863

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + PP  P+++ KNLRVC DCH+W KF S++T REI++RD  RFHHF  G CSCGDYW
Sbjct: 864 TLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 179/624 (28%), Positives = 304/624 (48%), Gaps = 29/624 (4%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V  +HA  VV G          L++ YA  G +  +R  F  +S R+  +W +M+S Y +
Sbjct: 62  VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
            G   EA   + Q   T+ + P  Y    VL AC        G+ IH  V K  F  + F
Sbjct: 122 RGLGKEAFRLYSQMHWTAVI-PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +L+ +Y  FG   +A ++F DM   D  ++N +ISG+ Q G+   AL I DEM+L G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +  D +TVAS+L  CA   ++  G  +H Y++K G+ F+     +L+++Y K G +  A 
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            +F+     +VV WN ++ AY Q +D   +   F  MQ  GI P+  T   +        
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                  +H   ++ G F  D+ +   ++DMY+K   ++ A  + E L  +DV+SW ++I
Sbjct: 361 QIELGEQIHSLSIKNG-FESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMI 419

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY Q+    EA+  F+ M++C  + P+     S   A + + A+RQG++IHARV  +  
Sbjct: 420 AGYVQHDFCEEALATFKEMQDCG-VWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D+ +   LV++Y +CGR ++A SLF ++     + WN +IS  G     ++AL  F +
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMK 538

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M   G + +  TF+S ++A ++   + +G++  H    + G     +    ++ L+G+ G
Sbjct: 539 MSQAGAKYNVFTFISAISALANLADIKQGKQ-VHGRAVKTGHTSETEVANALISLYGKCG 597

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHG-NME--------------------LGAV 638
            +  A      M +R + S W  ++ +C  HG  +E                    +G +
Sbjct: 598 SIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVL 656

Query: 639 ASDRLFEVDSENVGYYVLMSNIYA 662
           A+     +  E + Y+  MSN+Y 
Sbjct: 657 AACSHVGLVEEGLSYFKSMSNVYG 680


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/812 (36%), Positives = 471/812 (58%), Gaps = 50/812 (6%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKI--KTVFSSTKLVNFYANLG---DLSFSRHTF--DHI 105
           L  +C  L  +K+LH  ++  G +  K   +  KL+     +G    L ++R+ F  D  
Sbjct: 31  LLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYARNAFGDDDG 90

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DG 162
           +  +++ +N +I  Y   G   +A+  + Q  L  G+ PD YTFP +L AC  ++   +G
Sbjct: 91  NMASLFMYNCLIRGYASAGLGDQAILLYVQM-LVMGIVPDKYTFPFLLSACSKILALSEG 149

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            ++H +VLK+G E D+FV+ SL+H Y   G  ++ RKLFD M  R+  SW ++I+GY   
Sbjct: 150 VQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGR 209

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
             + EA+ +  +M   GV  +P+T+  ++  CA+  ++  G  +  YI + G+E +  + 
Sbjct: 210 DLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMV 269

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFTTMQQA 339
           N L++MY K G +  A ++FD+   +++V +N+I++ Y   E ++D +        M Q 
Sbjct: 270 NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLV---ILDEMLQK 326

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G +PD +T++S  +  AQL D    +S H +++R G    D  I NA++DMY K G   +
Sbjct: 327 GPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDN-ISNAIIDMYMKCGKREA 385

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNG-------------------------------LA 428
           AC VFE +P K V++WN+LI G  ++G                               + 
Sbjct: 386 ACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMF 445

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            EAIE+F+ M+    I  ++ T V I  A  ++GAL     +   + KN +  D+ + T 
Sbjct: 446 EEAIELFREMQN-QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTA 504

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LVDM+ +CG    AM +F ++ +     W A I    + G  + A+  F +ML++ V+PD
Sbjct: 505 LVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPD 564

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            + FV+LLTACSH G V +G++ F  M++  GI+PH+ HYGCMVDL GRAG L  A + I
Sbjct: 565 DVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLI 624

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           Q+MP+ P+  +WG+LL ACR H N+EL   A+++L ++  E VG +VL+SNIYA+ GKW 
Sbjct: 625 QSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWT 684

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V  VR   +++G++K PG SSIEV   +  F +G+ +H +   I   L  +  ++   G
Sbjct: 685 DVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAG 744

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVPD + VL DV+E EKEH+L+ HSE+LA+A+G+I++    PI++ KNLR+C DCH++ K
Sbjct: 745 YVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDCHSFAK 804

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +S++  REI VRD+NR+H FK+G CSC DYW
Sbjct: 805 LVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/777 (36%), Positives = 436/777 (56%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  +CTK       + +HA +         F    L+  Y   G    +   F  + 
Sbjct: 147 LSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDML 206

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           + +  T+N++IS + +CG    A+  F +  L SGLRPD  T   +L AC ++ D   GK
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQL-SGLRPDCVTVASLLAACASVGDLQKGK 265

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  +LK G  +D     SLL +Y + G    A  +F+     +   WN M+  Y Q  
Sbjct: 266 QLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQIS 325

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ +I  +M+  G+  +  T   IL  C  +  I  G  IH   +K+G E +++VS 
Sbjct: 326 DLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+G +  A ++ + + +RDVVSW S+IA Y Q +    A   F  MQ  G+ P
Sbjct: 386 VLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +   R    +H  +   G +  D+ I N +V++YA+ G    A ++
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSG-YAADISIWNTLVNLYARCGRSEEAFSL 504

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +  KD I+WN LI+G+ Q+ L  +A+ VF  M +      N  T++S + A +++  
Sbjct: 505 FREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA-KYNVFTFISAISALANLAD 563

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG ++H R +K     +  VA  L+ +YGKCG I+DA  +F ++   + V WN II+ 
Sbjct: 564 IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS 623

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+G +AL+ F QM  EG++P+ +TF+ +L ACSH GLV EG  YF  M   +G+ P
Sbjct: 624 CSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNP 683

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C+VD+ GRAG L  A  F+  MP+  +A IW  LL AC++H N+E+G +A+  L
Sbjct: 684 IPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHL 743

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA  GKW   D+VR + +DRG++K PG S IEV N V  F+ G
Sbjct: 744 LELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVG 803

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  ++IY  L  L  ++  +GY  +   +  + E+++K+     HSE+LA+AFG++
Sbjct: 804 DRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLM 863

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + PP  P+++ KNLRVC DCH+W K  S++T REI++RD  RFHHF  G CSCGDYW
Sbjct: 864 TLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 180/624 (28%), Positives = 304/624 (48%), Gaps = 29/624 (4%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V  +HA  VV G          L++ YA  G +  +R  F  +S R+  +W +M+S Y +
Sbjct: 62  VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
            G   EA   + Q   T+ + P  Y    VL AC        G+ IH  V K  F  + F
Sbjct: 122 SGLGKEAFRLYSQMHWTAVI-PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +L+ +Y  FG   +A ++F DM   D  ++N +ISG+ Q G+   AL I DEM+L G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +  D +TVAS+L  CA   ++  G  +H Y++K G+ F+     +L+++Y K G +  A 
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            +F+     +VV WN ++ AY Q +D   +   F  MQ  GI P+  T   +        
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                  +H   ++ G F  D+ +   ++DMY+K G ++ A  + E L  +DV+SW ++I
Sbjct: 361 QIELGEQIHSLSIKNG-FESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMI 419

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY Q+    EA+  F+ M++C  + P+     S   A + + A+RQG++IHARV  +  
Sbjct: 420 AGYVQHDFCEEALATFKEMQDCG-VWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D+ +   LV++Y +CGR ++A SLF ++     + WN +IS  G      +AL  F +
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMK 538

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M   G + +  TF+S ++A ++   + +G++  H    + G     +    ++ L+G+ G
Sbjct: 539 MGQAGAKYNVFTFISAISALANLADIKQGKQ-VHGRAVKTGHTSETEVANALISLYGKCG 597

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHG-NME--------------------LGAV 638
            +  A      M +R + S W  ++ +C  HG  +E                    +G +
Sbjct: 598 SIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVL 656

Query: 639 ASDRLFEVDSENVGYYVLMSNIYA 662
           A+     +  E + Y+  MSN+Y 
Sbjct: 657 AACSHVGLVEEGLSYFKSMSNVYG 680


>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
 gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
          Length = 564

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/498 (52%), Positives = 354/498 (71%), Gaps = 1/498 (0%)

Query: 142 LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKL 200
           LRPD +TFPP+++A        + H   L+LG    +VF + SL+H Y RFG    A ++
Sbjct: 65  LRPDSFTFPPLVRAAPGPASAAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FD+MP RD  +WNAM+SG C++  AV+A+ +   M  EGV+ D +T++S+LP+C    + 
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLLGDR 184

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
              L++H+Y VK GL   LFV N LI++Y K GM+  A  VF  M  RD+V+WNSII+AY
Sbjct: 185 ALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISAY 244

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
           EQ      A   F  M ++G+ PD+LTLVSL S VAQ  D R ++SVH ++ RRGW + D
Sbjct: 245 EQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWDVGD 304

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +I GNAVVDMYAKL  I++A  VF+ LP +DV+SWNTLITGY QNGL++EA+ ++  M+ 
Sbjct: 305 IIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQN 364

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              + P QGT+VSILPAYS++GAL+QG+++HA  IK  L  DV+V+TCL+D+Y KCG++ 
Sbjct: 365 HEGLKPIQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCGKLV 424

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +AM LF  +PR S+ PWNAII+  G+HG G KALN F QM  EG++PD++TFVSLL ACS
Sbjct: 425 EAMLLFEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLLAACS 484

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H+GLV +G+ +F +MQ  +GI P  KHY CMVD+ GRAG L  A  FIQ MP++PD+++W
Sbjct: 485 HAGLVDQGRSFFDLMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVW 544

Query: 621 GALLGACRIHGNMELGAV 638
           GALLGACRIHGN+EL A+
Sbjct: 545 GALLGACRIHGNVELAAI 562



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 241/489 (49%), Gaps = 15/489 (3%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKI-KTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           F  L ++        + HA  +  G +   VF+S  LV+ Y   G ++ +   FD +  R
Sbjct: 72  FPPLVRAAPGPASAAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPER 131

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           +V  WN+M+S   R  R  +AV  F +  +  G+  D  T   VL  C  L D      +
Sbjct: 132 DVPAWNAMLSGLCRNARAVDAVALFGRM-VGEGVAGDAVTLSSVLPMCVLLGDRALALVM 190

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K G   ++FV  +L+ +Y + G+   AR +F  M +RD  +WN++IS Y Q G  
Sbjct: 191 HVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISAYEQGGKV 250

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNN 284
             A+++   M   GVS D +T+ S+    A+  +      +H Y+ + G +  ++   N 
Sbjct: 251 AAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWDVGDIIAGNA 310

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQP 343
           +++MYAK   +  A  VFD + +RDVVSWN++I  Y Q+     A   +  MQ   G++P
Sbjct: 311 VVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLKP 370

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              T VS+    + L   +    +H   ++ G  + DV +   ++D+YAK G +  A  +
Sbjct: 371 IQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNL-DVYVSTCLIDLYAKCGKLVEAMLL 429

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +P +    WN +I G   +G  ++A+ +F  M++   I P+  T+VS+L A SH G 
Sbjct: 430 FEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQ-EGIKPDNVTFVSLLAACSHAGL 488

Query: 464 LRQGIKIHARVIKNCLCFDVFVA---TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNA 519
           + QG       +   +   V +A    C+VDM G+ G++D+A      +P +  S  W A
Sbjct: 489 VDQGRSFFD--LMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVWGA 546

Query: 520 IISCHGIHG 528
           ++    IHG
Sbjct: 547 LLGACRIHG 555



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 26/298 (8%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGD 94
           +SPD L      +        C      K +H  +   G  +  + +   +V+ YA L  
Sbjct: 265 VSPDVLT----LVSLASAVAQCGDERGAKSVHCYVRRRGWDVGDIIAGNAVVDMYAKLSK 320

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +  ++  FD++  R+V +WN++I+ Y++ G  +EAV  +       GL+P   TF  +L 
Sbjct: 321 IDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLKPIQGTFVSILP 380

Query: 155 ACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           A  N   L  G ++H   +K G   DV+V+  L+ +Y + G    A  LF+ MP R +G 
Sbjct: 381 AYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCGKLVEAMLLFEHMPRRSTGP 440

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG-----LLI 266
           WNA+I+G    G+  +AL++  +M+ EG+  D +T  S+L  C+ +  +  G     L+ 
Sbjct: 441 WNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLLAACSHAGLVDQGRSFFDLMQ 500

Query: 267 HLY----IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            +Y    I KH           +++M  + G +  A      M ++ D   W +++ A
Sbjct: 501 TVYGIVPIAKH--------YACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVWGALLGA 550


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 292/758 (38%), Positives = 447/758 (58%), Gaps = 11/758 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           R+++ + +S    ++     L++ +   G+L  + + F  +  RN+++WN ++  Y + G
Sbjct: 127 RVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAG 186

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
              EA+D  Y   L  G++PD YTFP VL+ C    NLV G++IH  V++ GFE DV V 
Sbjct: 187 LFDEALD-LYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVV 245

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY + G  N AR +FD MP RD  SWNAMISGY ++G  +E L +   M    V 
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVD 305

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D +T+ S++  C    +   G  IH Y+++     +  + N+LI MY+  G++  A  V
Sbjct: 306 PDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETV 365

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +   RD+VSW ++I+ YE    P  A   +  M+  GI PD +T+  + S  + L + 
Sbjct: 366 FSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNL 425

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
               ++H    ++G  +   I+ N+++DMYAK   I+ A  +F     K+++SW ++I G
Sbjct: 426 DMGMNLHEVAKQKG-LVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILG 484

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
              N    EA+  F+ M     + PN  T V +L A + +GAL  G +IHA  ++  + F
Sbjct: 485 LRINNRCFEALFFFREM--IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSF 542

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D F+   ++DMY +CGR++ A   F+ V    +  WN +++ +   G+G  A   F++M+
Sbjct: 543 DGFMPNAILDMYVRCGRMEYAWKQFFSVDHEVT-SWNILLTGYAERGKGAHATELFQRMV 601

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           +  V P+ +TF+S+L ACS SG+V+EG  YF+ M+ ++ I P+LKHY C+VDL GR+G L
Sbjct: 602 ESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKL 661

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A+ FIQ MP++PD ++WGALL +CRIH ++ELG +A++ +F+ D+ +VGYY+L+SN+Y
Sbjct: 662 EEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLY 721

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A+ GKW+ V EVR + R  GL   PG S +EV   V  F + +  HP+ ++I   L    
Sbjct: 722 ADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFY 781

Query: 722 AKMKSLGYV-PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
            KMK  G   P+ S +  D+ E  K  I   HSERLAI FG+I+S P  PI + KNL +C
Sbjct: 782 KKMKEAGVEGPESSHM--DIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMC 839

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
             CHN  KFIS+   REI VRD+ +FHHFK GICSC D
Sbjct: 840 QSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 248/486 (51%), Gaps = 13/486 (2%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  + ++ R   +H  ++  G    V     L+  Y   GD++ +R  FD + 
Sbjct: 210 FPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP 269

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+  +WN+MIS Y   G   E +  F    +   + PD  T   V+ AC  L D   G+
Sbjct: 270 NRDRISWNAMISGYFENGVCLEGLRLF-GMMIKYPVDPDLMTMTSVITACELLGDDRLGR 328

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  VL+  F  D  +  SL+ MY   GL   A  +F     RD  SW AMISGY    
Sbjct: 329 QIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCL 388

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL+    M  EG+  D IT+A +L  C+   N+  G+ +H    + GL     V+N
Sbjct: 389 MPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVAN 448

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+MYAK   +  AL +F   +E+++VSW SII     +N    A  FF  M +  ++P
Sbjct: 449 SLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKP 507

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TLV + S  A++      + +H   +R G    D  + NA++DMY + G +  A   
Sbjct: 508 NSVTLVCVLSACARIGALTCGKEIHAHALRTGVSF-DGFMPNAILDMYVRCGRMEYAWKQ 566

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +   +V SWN L+TGYA+ G  + A E+FQ M E N ++PN+ T++SIL A S  G 
Sbjct: 567 FFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESN-VSPNEVTFISILCACSRSGM 624

Query: 464 LRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
           + +G++  ++   K  +  ++    C+VD+ G+ G++++A     ++P +     W A++
Sbjct: 625 VAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL 684

Query: 522 SCHGIH 527
           +   IH
Sbjct: 685 NSCRIH 690



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 177/348 (50%), Gaps = 2/348 (0%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N+ I   C  GN   A+  LD M    + ++     +++ +C        G  ++ Y+  
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                +L + N L++M+ +FG +  A  VF +M +R++ SWN ++  Y ++     A   
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M   G++PD+ T   +      + +    R +H  ++R G F  DV + NA++ MY 
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYG-FESDVDVVNALITMYV 253

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G +N+A  VF+ +P +D ISWN +I+GY +NG+  E + +F MM +   ++P+  T  
Sbjct: 254 KCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIK-YPVDPDLMTMT 312

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S++ A   +G  R G +IH  V++     D  +   L+ MY   G I++A ++F +    
Sbjct: 313 SVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECR 372

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
             V W A+IS +       KAL  ++ M  EG+ PD IT   +L+ACS
Sbjct: 373 DLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACS 420


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 293/786 (37%), Positives = 454/786 (57%), Gaps = 11/786 (1%)

Query: 41  LENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           L N S ++  + LF    K     H+ + HA  +++G    + + TKL      L D S 
Sbjct: 3   LGNSSGKLSRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQ---KLFDFSA 59

Query: 98  SRHT---FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +RH    F  +   +++ +N ++  +      S ++  +      + L PD +T+   + 
Sbjct: 60  TRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVA 119

Query: 155 ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
           AC N      +H   +  G+  +VFV ++L+ +YC+F     ARK+FD MP RD+  WN 
Sbjct: 120 ACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           MI+G  ++    +++ +  EM  +GV +D  TV ++LP  A    +  G+ I    +K G
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
             F  +V   LI++Y+K G +  A  +F ++   D++++N++I+ +  +     +   F 
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            +  +G +    T+V L  + +       + S+HGF ++ G  +   +   A   +Y KL
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTV-STAFTAIYNKL 358

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
             I+ A  +F+  P K V++WN +I+GY QNG    AI +F+ M +  E  PN  T  +I
Sbjct: 359 NEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMK-TEFTPNAVTITTI 417

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A + +G+L  G  +H  +    L  +++V+T LVDMY KCG I +A  LF  +   ++
Sbjct: 418 LSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNT 477

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V WN +I  +G+HG G +AL  + +ML  G  P  +TF+S+L ACSH+GLV EG+  FH 
Sbjct: 478 VTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHN 537

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M  ++ I+P ++HY CMVD+ GR+G L  A  FI+ MPV P  ++WG LLGAC IH + +
Sbjct: 538 MVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTD 597

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +  +AS+RLFE+D  +VGYYVL+SNIY+    +     +R + + R L K+PG + IEVN
Sbjct: 598 IARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVN 657

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
               +F +G+R+H     IY +L  LT KM+ +GY  +    L DVEE+EKE  +  HSE
Sbjct: 658 GTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSE 717

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           +LAIAFG+I++ P + I+I KNLRVC DCH  TKFIS+ITER I+VRD+NRFHHFKDGIC
Sbjct: 718 KLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGIC 777

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 778 SCGDYW 783


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 286/761 (37%), Positives = 455/761 (59%), Gaps = 10/761 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRC 123
            +H L V  G  ++ F +  L+  YA  G L  +   F+ +   R+V +WNSMIS  ++ 
Sbjct: 185 EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQN 244

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   +A+D F      + L  + YT   VL+ C  L     G+++H ++LK G E ++  
Sbjct: 245 GMFLQALDLFRGMQ-RAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC 303

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            A LL MY + G  + A ++F ++  +D  SWN+M+S Y Q+G   EA++ + EM   G 
Sbjct: 304 NA-LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D   + S+         +L+G  +H Y +K  L+ +  V N L++MY K   + ++  
Sbjct: 363 QPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAH 422

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD+M  +D +SW +II  Y QS+  I A   F   Q+ GI+ D + + S+    + L  
Sbjct: 423 VFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLET 482

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
              ++ +H + +R G    D+++ N ++D+Y + G +  +  +FE +  KD+++W ++I 
Sbjct: 483 ILLAKQLHCYAIRNGLL--DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMIN 540

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            YA +GL +EA+ +F  M+   ++ P+    VSIL A   + +L +G ++H  +I+    
Sbjct: 541 CYANSGLLNEALVLFAEMQS-TDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFH 599

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            +  + + LVDMY  CG +  A+ +F  V     V W A+I+  G+HG G +A++ F++M
Sbjct: 600 MEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRM 659

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           L  GV PDH++F++LL ACSHS LV+EG+ Y  MM   + ++P  +HY C+VDL GR+G 
Sbjct: 660 LQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQ 719

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
              A+ FI++MP++P + +W +LLGACR+H N EL  VA++RL E++ +N G YVL+SN+
Sbjct: 720 TEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNV 779

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           +A +GKW    EVR+   +RGL+K P  S IE+ N V  F T + +H   E+I  +L  +
Sbjct: 780 FAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEI 839

Query: 721 TAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           T ++ K  GY  D   VL DV E+EK  +L  HSERLAI+FG+I++ P  P++I KNLRV
Sbjct: 840 TERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRV 899

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCH +TK +S++ +R+I+VRD+NRFHHF  G CSCGD+W
Sbjct: 900 CGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 191/598 (31%), Positives = 315/598 (52%), Gaps = 32/598 (5%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIK--TVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           DL  +   +    ++HA  V +G ++    F +TKL+  Y   G ++ +R  FD +S R 
Sbjct: 66  DLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRT 125

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLT--SGLRPDFYTFPPVLKACRNLVDGK---K 164
           V++WN++I  Y+  G   EA+  +    L+  SG+ PD  T   VLKA     DG+   +
Sbjct: 126 VFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCE 185

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSG 223
           +H   +K G +   FVA +L+ MY + G+ + A ++F+ M   RD  SWN+MISG  Q+G
Sbjct: 186 VHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNG 245

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
             ++ALD+   M+   +SM+  T   +L VC     +  G  +H  ++K G E N+   N
Sbjct: 246 MFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI-QCN 304

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+ MY K G +  ALRVF ++ E+D +SWNS+++ Y Q+     A  F + M + G QP
Sbjct: 305 ALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQP 364

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D   +VSL+S V  L    N + VH + +++     D  +GN ++DMY K   I  +  V
Sbjct: 365 DHACIVSLSSAVGHLGWLLNGKEVHAYAIKQ-RLDSDTQVGNTLMDMYMKCRYIEYSAHV 423

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVG 462
           F+ + +KD ISW T+IT YAQ+    EA+E+F +  +E  +++P      SIL A S + 
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMM--IGSILEACSGLE 481

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            +    ++H   I+N L  D+ V   ++D+YG+CG +  ++ +F  V +   V W ++I+
Sbjct: 482 TILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMIN 540

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ--------RYFHM 574
           C+   G  ++AL  F +M    V+PD +  VS+L A      +++G+        R FHM
Sbjct: 541 CYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHM 600

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             EE  +         +VD++   G L  A      +  + D  +W A++ A  +HG+
Sbjct: 601 --EEAIVSS-------LVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMHGH 648



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 117/268 (43%), Gaps = 21/268 (7%)

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF--DVFVATCLVDMYGKCGRIDDA 502
           +P Q  Y  +L   +   A+ QG+++HA  +        D F+AT L+ MYGKCGR+ DA
Sbjct: 55  SPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADA 114

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM---LDEGVRPDHITFVSLLTAC 559
             LF  +   +   WNA+I  +   G   +AL  +R M      GV PD  T  S+L A 
Sbjct: 115 RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKA- 173

Query: 560 SHSGLVSEGQ--RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
             SG+  +G+     H +  + G+         ++ ++ + G L  A    + M    D 
Sbjct: 174 --SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDV 231

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
           + W +++  C +   M L A+    LF      +   VL  N Y  VG  +   E+  L 
Sbjct: 232 ASWNSMISGC-LQNGMFLQAL---DLF----RGMQRAVLSMNSYTTVGVLQVCTELAQLN 283

Query: 678 RDRGLKKTPGWSSIEVN---NKVDIFYT 702
             R L      S  EVN   N + + YT
Sbjct: 284 LGRELHAALLKSGSEVNIQCNALLVMYT 311


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/763 (38%), Positives = 447/763 (58%), Gaps = 13/763 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++LH   +  G +  V   T LV+ Y    +    R+ FD +  RNV TW ++IS Y R 
Sbjct: 117 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYAR- 175

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRNLVDGK--KIHCSVLKLGFEWDVFV 180
             L+E V   +      G +P+ +TF   L       V G+  ++H  V+K G +  + V
Sbjct: 176 NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 235

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           + SL+++Y + G    AR LFD   V+   +WN+MISGY  +G  +EAL +   MRL  V
Sbjct: 236 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHV 295

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +   + ASI+ +CA    +     +H  +VK+G  F+  +   L+  Y+K   M  ALR
Sbjct: 296 RLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALR 355

Query: 301 VFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +F +     +VVSW ++I+ + Q++    A G F+ M++ G++P+  T     S++    
Sbjct: 356 LFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTY----SVILTAL 411

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
              +   VH  +++   +     +G A++D Y KLG ++ A  VF G+  KD+++W+ ++
Sbjct: 412 PVISPSEVHAQVVKTN-YERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAML 470

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHARVIKNC 478
            GYAQ G    AI++F  + +   + PN+ T+ SIL   +   A + QG + H   IK+ 
Sbjct: 471 AGYAQAGETEAAIKIFSELTKGG-VKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSR 529

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L   + V++ L+ MY K G I+ A  +F +      V WN++IS +  HGQ  KAL+ F+
Sbjct: 530 LDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 589

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M    V+ D +TF+ +  AC+H+GLV EG++YF +M  +  I P  +H  CMVDL+ RA
Sbjct: 590 EMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 649

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A   I NMP    ++IW  +L ACR+H   ELG +A++++  +  E+   YVL+S
Sbjct: 650 GQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLS 709

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+YA  G W+   +VR L  +R +KK PG+S IEV NK   F  G+R+HP  ++IY +L 
Sbjct: 710 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLE 769

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
           +L+ ++K LGY PD S+VLQD++++ KE +L  HSERLAIAFG+I++P  SP+ I KNLR
Sbjct: 770 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 829

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHF-KDGICSCGDYW 820
           VCGDCH   K I++I EREI+VRDSNRFHHF  DG+CSCGD+W
Sbjct: 830 VCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 273/552 (49%), Gaps = 22/552 (3%)

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTF 149
           A+   L ++ + FD    R+  ++ S++  + R GR  EA   F       G+  D   F
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHL-GMEMDCSIF 100

Query: 150 PPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
             VLK    L D   G+++HC  +K GF  DV V  SL+  Y +       R +FD+M  
Sbjct: 101 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE 160

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           R+  +W  +ISGY ++    E L +   M+ EG   +  T A+ L V A       GL +
Sbjct: 161 RNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQV 220

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H  +VK+GL+  + VSN+LIN+Y K G +R A  +FD+   + VV+WNS+I+ Y  +   
Sbjct: 221 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 280

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
           + A G F +M+   ++    +  S+  + A L + R +  +H  +++ G F+ D  I  A
Sbjct: 281 LEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYG-FVFDQNIRTA 339

Query: 387 VVDMYAKLGIINSACAVF-EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           ++  Y+K   +  A  +F E   + +V+SW  +I+G+ QN    EA+ +F  M+    + 
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKR-KGVR 398

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN+ TY  IL A   +       ++HA+V+K        V T L+D Y K G++D+A  +
Sbjct: 399 PNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKV 454

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  +     V W+A+++ +   G+ + A+  F ++   GV+P+  TF S+L  C+ +   
Sbjct: 455 FSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAAT-TA 513

Query: 566 SEGQ-RYFHMMQEEFGIKPHLKHYGC----MVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           S GQ + FH     F IK  L    C    ++ ++ + GH+  A    +    + D   W
Sbjct: 514 SMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREK-DLVSW 568

Query: 621 GALLGACRIHGN 632
            +++     HG 
Sbjct: 569 NSMISGYAQHGQ 580


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 316/846 (37%), Positives = 473/846 (55%), Gaps = 57/846 (6%)

Query: 28  SAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVN 87
           +AAA S Q     L + S           C  +  VK +H  L+  G I T+  ++ L++
Sbjct: 9   NAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFG-ILTLNLTSHLIS 67

Query: 88  FYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR-- 143
            Y ++G LS +         S   VY WNS+I  Y   G    A  C Y F L   L   
Sbjct: 68  TYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY---GDNGCANKCLYLFGLMHSLSWT 124

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YTFP V KAC  +     G+  H   L  GF  +VFV  +L+ MY R    + ARK+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDN 259
           FD+M V D  SWN++I  Y + G    AL++   M  E G   D IT+ ++LP CA    
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
              G  +H + V   +  N+FV N L++MYAK GMM  A  VF  M  +DVVSWN+++A 
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304

Query: 320 YEQSNDPITAHGFFTTMQQ-----------------------------------AGIQPD 344
           Y Q      A   F  MQ+                                   +GI+P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFI------MRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            +TL+S+ S  A +    + + +H +       +R+    ++ ++ N ++DMYAK   ++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424

Query: 399 SACAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSIL 455
           +A A+F+ L  K  DV++W  +I GY+Q+G A++A+E+  +M EE  +  PN  T    L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484

Query: 456 PAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
            A + + ALR G +IHA  ++N      +FV+ CL+DMY KCG I DA  +F  +   + 
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W ++++ +G+HG G++AL  F +M   G + D +T + +L ACSHSG++ +G  YF+ 
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M+  FG+ P  +HY C+VDL GRAG L  A   I+ MP+ P   +W A L  CRIHG +E
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           LG  A++++ E+ S + G Y L+SN+YAN G+W+ V  +RSL R +G+KK PG S +E  
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
                F+ G++THP  ++IY  L +   ++K +GYVP+  F L DV+++EK+ +L  HSE
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSE 784

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           +LA+A+GI+++P  + I+I KNLRVCGDCH    ++S+I + +II+RDS+RFHHFK+G C
Sbjct: 785 KLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSC 844

Query: 815 SCGDYW 820
           SC  YW
Sbjct: 845 SCKGYW 850


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 297/780 (38%), Positives = 447/780 (57%), Gaps = 19/780 (2%)

Query: 51  DDLFQSCTKLHHVKRLH-------ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +D+F +  +L   KR H       ++ + S    +V      +  +   G+L  + + F 
Sbjct: 94  EDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFG 153

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +S RN+++WN ++  Y + G   EA+  +++     G++PD YTFP VL+ C  + D  
Sbjct: 154 KMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++H  V++ G+E D+ V  +L+ MY + G    AR LFD MP RD  SWNAMISGY 
Sbjct: 214 RGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273

Query: 221 QSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           ++G   E L +   MR  G+S+DP  +T+ S++  C    +   G  IH Y++  G   +
Sbjct: 274 ENGMGHEGLKLFFAMR--GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           + V N+L  MY   G  R A ++F +M  +D+VSW ++I+ YE +  P  A   +  M Q
Sbjct: 332 ISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQ 391

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             ++PD +T+ ++ S  A L D      +H   ++    +  VI+ N +++MY+K   I+
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCID 450

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  +F  +P K+VISW ++I G   N    EA+  F+ M+    + PN  T  + L A 
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM--TLQPNAITLTAALAAC 508

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +GAL  G +IHA V++  +  D F+   L+DMY +CGR++ A + F    +  S  WN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDVS-SWN 567

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +++ +   GQG   +  F +M+   VRPD ITF+SLL  C  S +V +G  YF  M EE
Sbjct: 568 ILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EE 626

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +G+ P+LKHY C+VDL GRAG L  AH FIQ MPV PD ++WGALL ACRIH N++LG +
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGEL 686

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           ++ R+FE+D  +VGYY+L+ N+YA+ GKW  V +VR + ++ GL    G S +EV  KV 
Sbjct: 687 SAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F + ++ HP+ ++I   L     KM  +G          D  E  ++ I   HSER AI
Sbjct: 747 AFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERKAI 806

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+I+S P  PI + KNL +C  CH+  KFIS+   REI VRDS  FHHFKDG CSCGD
Sbjct: 807 AFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSCGD 866



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 206/420 (49%), Gaps = 13/420 (3%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           + G C +G   EA+ +L+ M+   V++D     +++ +C        G  ++   +    
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             ++ + N  + M+ +FG +  A  VF +M ER++ SWN ++  Y +      A   +  
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 336 MQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           M    G++PD+ T   +      + D    R VH  ++R G+ + D+ + NA++ MY K 
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYEL-DIDVVNALITMYVKC 244

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G + SA  +F+ +P +D+ISWN +I+GY +NG+  E +++F  M   + ++P+  T  S+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLS-VDPDLMTLTSV 303

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           + A   +G  R G  IHA VI      D+ V   L  MY   G   +A  LF ++     
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDI 363

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W  +IS +  +   +KA++ +R M  + V+PD IT  ++L+AC+  G +  G      
Sbjct: 364 VSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL--- 420

Query: 575 MQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
              +  IK  L  Y      +++++ +   +  A +   N+P R +   W +++   R++
Sbjct: 421 --HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 305/889 (34%), Positives = 491/889 (55%), Gaps = 90/889 (10%)

Query: 16  LLPLLQAHRPL---FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVV 72
           LL L +A +P+   F + A +  I  D   +      F  L + C   + V ++H  ++ 
Sbjct: 8   LLNLPKAVKPIGEWFLSGARAACIGVDVYPSH-----FASLLKECKSANTVHQIHQQIIA 62

Query: 73  SGK--------------------IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           SG                     I      T +V  Y   G   ++    + ++      
Sbjct: 63  SGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVW 122

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN +I  +++ GRL  A++   +  L +G RPD +T P VLKAC  L     G   H  +
Sbjct: 123 WNLLIREHIKQGRLDSAINVSCRM-LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLI 181

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR---DSGSWNAMISGYCQSGNAV 226
              GFE +VF+  +L+ MY R G    A  +FD++  R   D  SWN+++S + +S NA 
Sbjct: 182 CCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAW 241

Query: 227 EALDILDEMRL------EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
            ALD+  +M L           D I++ +ILP C     +     +H   +++G   ++F
Sbjct: 242 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVF 301

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-- 338
           V N LI+ YAK G+M +A++VF+ M  +DVVSWN+++A Y QS +   A   F  M++  
Sbjct: 302 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 361

Query: 339 ---------------------------------AGIQPDLLTLVSLTSIVAQLNDCRNSR 365
                                            +G  P+ +T++S+ S  A L       
Sbjct: 362 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 421

Query: 366 SVHGFIMRR---------GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV--KDVIS 414
            +H + ++          G   ED+++ NA++DMY+K     +A ++F+ +P+  ++V++
Sbjct: 422 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 481

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           W  +I G+AQ G +++A+++F +M+ E   + PN  T   IL A +H+ A+R G +IHA 
Sbjct: 482 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 541

Query: 474 VIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           V+++        FVA CL+DMY KCG +D A  +F  + + S++ W ++++ +G+HG+G 
Sbjct: 542 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 601

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL+ F +M   G  PD ITF+ +L ACSH G+V +G  YF  M  ++G+ P  +HY C 
Sbjct: 602 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 661

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           +DL  R+G L  A   +++MP+ P A +W ALL ACR+H N+EL   A ++L E+++EN 
Sbjct: 662 IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 721

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y L+SNIYA  G+W+ V  +R L +  G+KK PG S ++       F+ G+R+HP   
Sbjct: 722 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSP 781

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +IY  L +L  ++K++GYVP+ +F L DV+E+EK ++L  HSE+LA+A+G++++ P  PI
Sbjct: 782 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPI 841

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLRVCGDCH+   +IS+I + EI+VRD +RFHHFK+G CSCG YW
Sbjct: 842 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 890


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 278/718 (38%), Positives = 422/718 (58%), Gaps = 47/718 (6%)

Query: 149 FPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +L+ CR L +   G ++H  ++  G +   F+ + LL +YC+ G    AR++FD M 
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R+  SW A++  YC  G+  E + +   M  EGV  D      +   C+   N   G  
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           ++ Y++  G E N  V  ++++M+ K G M  A R F+++  +DV  WN +++ Y    +
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  M   G++P+ +T+ S  S    L+  R+ R +HG+ ++      D+++GN
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 386 AVVDMYAK----------LGIINS---------------------------------ACA 402
           ++VD YAK           G+I                                   AC+
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF  L  +DV+ WN++I+  AQ+G +  A+++ + M   N +  N  T VS LPA S + 
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN-VEVNTVTMVSALPACSKLA 371

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           ALRQG +IH  +I+  L    F+   L+DMYG+CG I  +  +F  +P+   V WN +IS
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+HG G  A+N F+Q    G++P+HITF +LL+ACSHSGL+ EG +YF MM+ E+ + 
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMD 491

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++ Y CMVDL  RAG       FI+ MP  P+A++WG+LLGACRIH N +L   A+  
Sbjct: 492 PAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARY 551

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LFE++ ++ G YVLM+NIY+  G+WE   ++R L ++RG+ K PG S IEV  K+  F  
Sbjct: 552 LFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVV 611

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+ +HP  E+I  ++ +L   +K +GYVPD +FVLQDV+EDEKE  L  HSE++A+AFG+
Sbjct: 612 GDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGL 671

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+   +P++I KNLRVCGDCH+ TKFIS++ +R+II+RD+ RFHHF DG+CSCGDYW
Sbjct: 672 ISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 292/588 (49%), Gaps = 60/588 (10%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  + Q C KL++++   ++HA LVV+G     F  ++L+  Y   G +  +R  FD +S
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            RNV++W +++ +Y   G   E +  FY   +  G+RPD + FP V KAC  L +   GK
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGK 131

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            ++  +L +GFE +  V  S+L M+ + G  ++AR+ F+++  +D   WN M+SGY   G
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVS 282
              +AL++  +M LEGV  + IT+AS +  C     +  G  IH Y +K   L+ +L V 
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251

Query: 283 NNLINMYA----------KFGMMRH---------------------------------AL 299
           N+L++ YA          KFGM++                                  A 
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIAC 311

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            VF ++  RDVV WNSII+A  QS   + A      M  + ++ + +T+VS     ++L 
Sbjct: 312 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 371

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
             R  + +H FI+R G    + I+ N+++DMY + G I  +  +F+ +P +D++SWN +I
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFIL-NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 430

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y  +G   +A+ +FQ       + PN  T+ ++L A SH G + +G K + +++K   
Sbjct: 431 SVYGMHGFGMDAVNLFQQFRTMG-LKPNHITFTNLLSACSHSGLIEEGWK-YFKMMKTEY 488

Query: 480 CFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNF 536
             D  V    C+VD+  + G+ ++ +    ++P   ++  W +++    IH   D A   
Sbjct: 489 AMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYA 548

Query: 537 FRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
            R + +  + P     +V +    S +G   +  +   +M+E    KP
Sbjct: 549 ARYLFE--LEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKP 594



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 38/340 (11%)

Query: 14  CKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVS 73
           C  L LL+  R +        ++  D L   S      D +  C  +   +R   ++   
Sbjct: 222 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNS----LVDYYAKCRSVEVARRKFGMI--- 274

Query: 74  GKIKTVFSSTKLVNFYANLGDLSFSRH------------------TFDHISYRNVYTWNS 115
                    T LV++ A L    F+++                   F  +S R+V  WNS
Sbjct: 275 -------KQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNS 327

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKL 172
           +IS   + GR   A+D   +  L S +  +  T    L AC  L     GK+IH  +++ 
Sbjct: 328 IISACAQSGRSVNALDLLREMNL-SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 386

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G +   F+  SL+ MY R G    +R++FD MP RD  SWN MIS Y   G  ++A+++ 
Sbjct: 387 GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLF 446

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAK 291
            + R  G+  + IT  ++L  C+ S  I  G     +   ++ ++  +     ++++ ++
Sbjct: 447 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 506

Query: 292 FGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAH 330
            G     L   ++M  E +   W S++ A     +P  A 
Sbjct: 507 AGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAE 546



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +EC EI      Y SIL     +  LR G ++HA+++ N +    F+ + L+++Y + G 
Sbjct: 7   DECIEI------YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++DA  +F ++   +   W AI+  +   G  ++ +  F  M++EGVRPDH  F  +  A
Sbjct: 61  VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS       G+  +  M    G + +    G ++D+F + G + +A  F + +  + D  
Sbjct: 121 CSELKNYRVGKDVYDYML-SIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVF 178

Query: 619 IWGALLGA 626
           +W  ++  
Sbjct: 179 MWNIMVSG 186


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 288/777 (37%), Positives = 438/777 (56%), Gaps = 9/777 (1%)

Query: 50   FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
            F  +  +C K+  ++   +LH L++  G     +    LV+ Y +LG+L  + H F ++S
Sbjct: 291  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350

Query: 107  YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGK 163
             R+  T+N++I+   +CG   +A++ F +  L  GL PD  T   ++ AC     L  G+
Sbjct: 351  QRDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQ 409

Query: 164  KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            ++H    KLGF  +  +  +LL++Y +      A   F +  V +   WN M+  Y    
Sbjct: 410  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469

Query: 224  NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            +   +  I  +M++E +  +  T  SIL  C R  ++  G  IH  I+K   + N +V +
Sbjct: 470  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529

Query: 284  NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             LI+MYAK G +  A  +  +   +DVVSW ++IA Y Q N    A   F  M   GI+ 
Sbjct: 530  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 344  DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
            D + L +  S  A L   +  + +H      G F  D+   NA+V +Y++ G I  +   
Sbjct: 590  DEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLA 648

Query: 404  FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
            FE     D I+WN L++G+ Q+G   EA+ VF  M     I+ N  T+ S + A S    
Sbjct: 649  FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETAN 707

Query: 464  LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
            ++QG ++HA + K     +  V   L+ MY KCG I DA   F +V   + V WNAII+ 
Sbjct: 708  MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767

Query: 524  HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
            +  HG G +AL+ F QM+   VRP+H+T V +L+ACSH GLV +G  YF  M  E+G+ P
Sbjct: 768  YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827

Query: 584  HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              +HY C+VD+  RAG L  A  FIQ MP++PDA +W  LL AC +H NME+G  A+  L
Sbjct: 828  KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 887

Query: 644  FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
             E++ E+   YVL+SN+YA   KW+  D  R   +++G+KK PG S IEV N +  FY G
Sbjct: 888  LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947

Query: 704  NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
            ++ HP  ++I++  ++LT +   +GYV D   +L +++ ++K+ I+  HSE+LAI+FG++
Sbjct: 948  DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 1007

Query: 764  SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S P   PI + KNLRVC DCH W KF+S+++ REIIVRD+ RFHHF+ G CSC DYW
Sbjct: 1008 SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 286/592 (48%), Gaps = 17/592 (2%)

Query: 53  LFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L + C K    L   ++LH+ ++  G       S KL +FY   GDL  +   FD +  R
Sbjct: 90  LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR------NLVDG 162
            ++TWN MI        + E    F +  ++  + P+  TF  VL+ACR      ++V+ 
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVE- 207

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            +IH  +L  G      V   L+ +Y R G  ++AR++FD + ++D  SW AMISG  ++
Sbjct: 208 -QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               EA+ +  +M + G+   P   +S+L  C + +++  G  +H  ++K G   + +V 
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L+++Y   G +  A  +F  M +RD V++N++I    Q      A   F  M   G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  TL SL    +        + +H +  + G+   + I G A++++YAK   I +A  
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALD 445

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F    V++V+ WN ++  Y        +  +F+ M +  EI PNQ TY SIL     +G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLG 504

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            L  G +IH+++IK     + +V + L+DMY K G++D A  +  +      V W  +I+
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  +   DKAL  FRQMLD G+R D +   + ++AC+    + EGQ+  H      G  
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFS 623

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             L     +V L+ R G +  ++   +      D   W AL+   +  GN E
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNE 674


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 305/889 (34%), Positives = 491/889 (55%), Gaps = 90/889 (10%)

Query: 16  LLPLLQAHRPL---FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVV 72
           LL L +A +P+   F + A +  I  D   +      F  L + C   + V ++H  ++ 
Sbjct: 15  LLNLPKAVKPIGEWFLSGARAACIGVDVYPSH-----FASLLKECKSANTVHQIHQQIIA 69

Query: 73  SGK--------------------IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           SG                     I      T +V  Y   G   ++    + ++      
Sbjct: 70  SGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVW 129

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN +I  +++ GRL  A++   +  L +G RPD +T P VLKAC  L     G   H  +
Sbjct: 130 WNLLIREHIKQGRLDSAINVSCRM-LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLI 188

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR---DSGSWNAMISGYCQSGNAV 226
              GFE +VF+  +L+ MY R G    A  +FD++  R   D  SWN+++S + +S NA 
Sbjct: 189 CCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAW 248

Query: 227 EALDILDEMRL------EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
            ALD+  +M L           D I++ +ILP C     +     +H   +++G   ++F
Sbjct: 249 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVF 308

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-- 338
           V N LI+ YAK G+M +A++VF+ M  +DVVSWN+++A Y QS +   A   F  M++  
Sbjct: 309 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 368

Query: 339 ---------------------------------AGIQPDLLTLVSLTSIVAQLNDCRNSR 365
                                            +G  P+ +T++S+ S  A L       
Sbjct: 369 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 428

Query: 366 SVHGFIMRR---------GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV--KDVIS 414
            +H + ++          G   ED+++ NA++DMY+K     +A ++F+ +P+  ++V++
Sbjct: 429 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 488

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           W  +I G+AQ G +++A+++F +M+ E   + PN  T   IL A +H+ A+R G +IHA 
Sbjct: 489 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 548

Query: 474 VIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           V+++        FVA CL+DMY KCG +D A  +F  + + S++ W ++++ +G+HG+G 
Sbjct: 549 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 608

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL+ F +M   G  PD ITF+ +L ACSH G+V +G  YF  M  ++G+ P  +HY C 
Sbjct: 609 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 668

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           +DL  R+G L  A   +++MP+ P A +W ALL ACR+H N+EL   A ++L E+++EN 
Sbjct: 669 IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 728

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y L+SNIYA  G+W+ V  +R L +  G+KK PG S ++       F+ G+R+HP   
Sbjct: 729 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSP 788

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +IY  L +L  ++K++GYVP+ +F L DV+E+EK ++L  HSE+LA+A+G++++ P  PI
Sbjct: 789 QIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPI 848

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLRVCGDCH+   +IS+I + EI+VRD +RFHHFK+G CSCG YW
Sbjct: 849 RITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 897


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 288/777 (37%), Positives = 438/777 (56%), Gaps = 9/777 (1%)

Query: 50   FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
            F  +  +C K+  ++   +LH L++  G     +    LV+ Y +LG+L  + H F ++S
Sbjct: 251  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310

Query: 107  YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGK 163
             R+  T+N++I+   +CG   +A++ F +  L  GL PD  T   ++ AC     L  G+
Sbjct: 311  QRDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQ 369

Query: 164  KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            ++H    KLGF  +  +  +LL++Y +      A   F +  V +   WN M+  Y    
Sbjct: 370  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 429

Query: 224  NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            +   +  I  +M++E +  +  T  SIL  C R  ++  G  IH  I+K   + N +V +
Sbjct: 430  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 489

Query: 284  NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             LI+MYAK G +  A  +  +   +DVVSW ++IA Y Q N    A   F  M   GI+ 
Sbjct: 490  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 549

Query: 344  DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
            D + L +  S  A L   +  + +H      G F  D+   NA+V +Y++ G I  +   
Sbjct: 550  DEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLA 608

Query: 404  FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
            FE     D I+WN L++G+ Q+G   EA+ VF  M     I+ N  T+ S + A S    
Sbjct: 609  FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETAN 667

Query: 464  LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
            ++QG ++HA + K     +  V   L+ MY KCG I DA   F +V   + V WNAII+ 
Sbjct: 668  MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 727

Query: 524  HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
            +  HG G +AL+ F QM+   VRP+H+T V +L+ACSH GLV +G  YF  M  E+G+ P
Sbjct: 728  YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 787

Query: 584  HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              +HY C+VD+  RAG L  A  FIQ MP++PDA +W  LL AC +H NME+G  A+  L
Sbjct: 788  KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 847

Query: 644  FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
             E++ E+   YVL+SN+YA   KW+  D  R   +++G+KK PG S IEV N +  FY G
Sbjct: 848  LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 907

Query: 704  NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
            ++ HP  ++I++  ++LT +   +GYV D   +L +++ ++K+ I+  HSE+LAI+FG++
Sbjct: 908  DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 967

Query: 764  SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S P   PI + KNLRVC DCH W KF+S+++ REIIVRD+ RFHHF+ G CSC DYW
Sbjct: 968  SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 286/592 (48%), Gaps = 17/592 (2%)

Query: 53  LFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L + C K    L   ++LH+ ++  G       S KL +FY   GDL  +   FD +  R
Sbjct: 50  LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 109

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR------NLVDG 162
            ++TWN MI        + E    F +  ++  + P+  TF  VL+ACR      ++V+ 
Sbjct: 110 TIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVE- 167

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            +IH  +L  G      V   L+ +Y R G  ++AR++FD + ++D  SW AMISG  ++
Sbjct: 168 -QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 226

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               EA+ +  +M + G+   P   +S+L  C + +++  G  +H  ++K G   + +V 
Sbjct: 227 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 286

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L+++Y   G +  A  +F  M +RD V++N++I    Q      A   F  M   G++
Sbjct: 287 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 346

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  TL SL    +        + +H +  + G+   + I G A++++YAK   I +A  
Sbjct: 347 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALD 405

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F    V++V+ WN ++  Y        +  +F+ M +  EI PNQ TY SIL     +G
Sbjct: 406 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLG 464

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            L  G +IH+++IK     + +V + L+DMY K G++D A  +  +      V W  +I+
Sbjct: 465 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 524

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  +   DKAL  FRQMLD G+R D +   + ++AC+    + EGQ+  H      G  
Sbjct: 525 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFS 583

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             L     +V L+ R G +  ++   +      D   W AL+   +  GN E
Sbjct: 584 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNE 634


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 292/698 (41%), Positives = 419/698 (60%), Gaps = 28/698 (4%)

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+ YTFP  LKAC  L D   G+ IH   +  G + D+FV+ +LL MY +      A  +
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSD 258
           F  MP RD  +WNAM++GY   G    A+  L  M+++   + P   T+ ++LP+ A+  
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 259 NILSGLLIHLYIVKHGLEFN----------LFVSNNLINMYAKFGMMRHALRVFDQMMER 308
            +  G  +H Y ++  L  N          + +   L++MYAK G + +A RVFD M  R
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC------R 362
           + V+W+++I  +   +    A   F  M   G     L  +S TSI + L  C      R
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHLR 242

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               +H  + + G    D+  GN+++ MYAK G+I+ A A+F+ + VKD +S++ L++GY
Sbjct: 243 MGEQLHALLAKSG-VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 301

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            QNG A EA  VF+ M+ CN + P+  T VS++PA SH+ AL+ G   H  VI   L  +
Sbjct: 302 VQNGRAEEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             +   L+DMY KCGRID +  +F  +P    V WN +I+ +GIHG G +A   F +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G  PD +TF+ LL+ACSHSGLV EG+ +FH+M   +G+ P ++HY CMVDL  R G L 
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+ FIQ+MP+R D  +W ALLGACR++ N++LG   S  + E+  E  G +VL+SNIY+
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             G+++   EVR + + +G KK+PG S IE+N  +  F  G+++HP+  +IY EL N+  
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
            +K LGY PD SFVLQD+EE+EKE  L  HSE+LAIA+GI+S      I + KNLRVCGD
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 660

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH   K IS +  R IIVRD+NRFHHFK+G CSCGD+W
Sbjct: 661 CHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 251/519 (48%), Gaps = 25/519 (4%)

Query: 50  FDDLFQSCTKL--HHVKR-LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F    ++C+ L  HH  R +H   + +G    +F ST L++ Y     L  + H F  + 
Sbjct: 13  FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 72

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFP---PVLKACRNLVDG 162
            R++  WN+M++ Y   G    AV       +    LRP+  T     P+L     L  G
Sbjct: 73  ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 132

Query: 163 KKIHCSVLKLGFEWD----------VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
             +H   ++     +          V +  +LL MY + G    AR++FD MP R+  +W
Sbjct: 133 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 192

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIV 271
           +A+I G+       +A  +   M  +G+  + P ++AS L  CA  D++  G  +H  + 
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 252

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K G+  +L   N+L++MYAK G++  A+ +FD+M  +D VS++++++ Y Q+     A  
Sbjct: 253 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 312

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  MQ   ++PD  T+VSL    + L   ++ R  HG ++ RG   E  I  NA++DMY
Sbjct: 313 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC-NALIDMY 371

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G I+ +  VF  +P +D++SWNT+I GY  +GL  EA  +F  M       P+  T+
Sbjct: 372 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTF 430

Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           + +L A SH G + +G    H       L   +    C+VD+  + G +D+A      +P
Sbjct: 431 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 490

Query: 511 -RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGV 545
            R+    W A++    ++     G K     +++  EG 
Sbjct: 491 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 529



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 203/422 (48%), Gaps = 46/422 (10%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V   T L++ YA  G L ++R  FD +  RN  TW+++I  +V C R+++A    ++  L
Sbjct: 158 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAF-LLFKAML 216

Query: 139 TSG---LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             G   L P   +    L+AC +L     G+++H  + K G   D+    SLL MY + G
Sbjct: 217 AQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 274

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           L + A  LFD+M V+D+ S++A++SGY Q+G A EA  +  +M+   V  D  T+ S++P
Sbjct: 275 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+    +  G   H  ++  GL     + N LI+MYAK G +  + +VF+ M  RD+VS
Sbjct: 335 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 394

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++IA Y        A   F  M   G  PD +T + L      L+ C +S  V   I 
Sbjct: 395 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL------LSACSHSGLV---IE 445

Query: 373 RRGWF------------MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
            + WF            ME  I    +VD+ ++ G ++ A    + +P++ DV  W  L+
Sbjct: 446 GKHWFHVMGHGYGLTPRMEHYI---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502

Query: 420 TG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARVI 475
                Y    L  +   + Q      E+ P   G +V +   YS  G   +  ++  R+I
Sbjct: 503 GACRVYKNIDLGKKVSRMIQ------ELGPEGTGNFVLLSNIYSAAGRFDEAAEV--RII 554

Query: 476 KN 477
           + 
Sbjct: 555 QK 556



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 14/197 (7%)

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           + + PN  T+   L A S +     G  IH   I   L  D+FV+T L+DMY KC  + D
Sbjct: 4   HRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPD 63

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF--RQMLDEGVRPDHITFVSLLTAC 559
           A  +F  +P    V WNA+++ +  HG    A+      QM    +RP+  T V+LL   
Sbjct: 64  AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYG----------CMVDLFGRAGHLGMAHNFIQ 609
           +  G +++G    H       + P+                ++D++ + G L  A     
Sbjct: 124 AQQGALAQGTS-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182

Query: 610 NMPVRPDASIWGALLGA 626
            MP R + + W AL+G 
Sbjct: 183 AMPARNEVT-WSALIGG 198


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 290/809 (35%), Positives = 460/809 (56%), Gaps = 45/809 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHISYRNV 110
           F+ C  +  +K+LH+ +  +G      S T L++    +G    L +++   +     N 
Sbjct: 40  FKKCKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNG 99

Query: 111 -----YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDG 162
                Y ++S+I  +  CG   +A+  F Q  +  G  PD +TFP VL AC     L +G
Sbjct: 100 IMGTHYMFSSLIRGFSACGLGYKAIVVFRQL-MCMGAVPDNFTFPFVLSACTKSAALTEG 158

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            ++H +++K+GFE D+FV  SL+H Y   G  +  R++FD M  R+  SW ++I GY + 
Sbjct: 159 FQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKR 218

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G   EA+ +  EM   G+  + +T+  ++  CA+  ++  G  +   I +  LE N  + 
Sbjct: 219 GCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV 278

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++MY K G +  A ++FD+ +++++V +N+I++ Y +             M + G +
Sbjct: 279 NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPR 338

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD +T++S  S  ++L+D    +  HG+++R G    D +  NA+++MY K G    AC 
Sbjct: 339 PDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC-NAIINMYMKCGKQEMACR 397

Query: 403 VFE-------------------------------GLPVKDVISWNTLITGYAQNGLASEA 431
           VF+                                +P  D++SWNT+I    Q  +  EA
Sbjct: 398 VFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEA 457

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           IE+F++M+    I  ++ T V +  A  ++GAL     IH  + K  + FD+ + T LVD
Sbjct: 458 IELFRVMQS-EGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVD 516

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           M+ +CG    AM +F ++ +     W A I    + G G  A+  F +ML +G++PD + 
Sbjct: 517 MFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVV 576

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           FV+LLTA SH GLV +G   F  M++ +GI P   HYGCMVDL GRAG L  A + I +M
Sbjct: 577 FVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSM 636

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
            + P+  IWG+LL ACR+H N+++ A A++R+ E+D E  G +VL+SNIYA+ G+W+ V 
Sbjct: 637 QMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVA 696

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           +VR   +++G  K PG SSIE+N K+  F TG+ +HP+   I   L+ +  +++ +GYVP
Sbjct: 697 KVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVP 756

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D + VL DV E EKE++L+ HSE+LAIAF +IS+    PI++ KNLR+C DCH++ K +S
Sbjct: 757 DLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVS 816

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +   REIIVRD+NRFH F+ G CSCGDYW
Sbjct: 817 KSYSREIIVRDNNRFHFFQQGFCSCGDYW 845



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 261/534 (48%), Gaps = 44/534 (8%)

Query: 40  CLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C+        F  +  +CTK   L    ++H  +V  G  + +F    L++FY   G++ 
Sbjct: 132 CMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEID 191

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
             R  FD +S RNV +W S+I  Y + G   EAV  F++  +  G+RP+  T   V+ AC
Sbjct: 192 CMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEM-VEVGIRPNSVTMVGVISAC 250

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L D   G+++   + +L  E +  +  +L+ MY + G  + ARK+FD+   ++   +N
Sbjct: 251 AKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYN 310

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
            ++S Y + G A E L +L EM   G   D IT+ S +  C+  D++  G   H Y++++
Sbjct: 311 TIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRN 370

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           GLE    V N +INMY K G    A RVFD+M+ +  VSWNS+IA + ++ D  +A   F
Sbjct: 371 GLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIF 430

Query: 334 TT-------------------------------MQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           +                                MQ  GI  D +T+V + S    L    
Sbjct: 431 SAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALD 490

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +HG+I ++     D+ +G A+VDM+A+ G   SA  VF  +  +DV +W   I   
Sbjct: 491 LAKWIHGYIKKKDIHF-DMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAM 549

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LC 480
           A  G  + AIE+F  M +   I P+   +V++L A SH G + QG  I  R +K+   + 
Sbjct: 550 AMEGNGTGAIELFDEMLQ-QGIKPDGVVFVALLTALSHGGLVEQGWHIF-RSMKDIYGIA 607

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
                  C+VD+ G+ G + +A+SL   +    + V W ++++   +H   D A
Sbjct: 608 PQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIA 661


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 284/728 (39%), Positives = 436/728 (59%), Gaps = 7/728 (0%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           S+  FD    + +   N ++  + R  +  EA++ F      SG   D  +   VLK C 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLR-RSGSPTDGSSLSCVLKVCG 103

Query: 158 NLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
            L D   GK++HC  +K GF  DV V  SL+ MY +        ++FD+M V++  SW +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +++GY Q+G   +AL +  +M+LEG+  +P T A++L   A    +  G+ +H  ++K G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           L+  +FV N+++NMY+K  M+  A  VFD M  R+ VSWNS+IA +  +   + A   F 
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M+  G++       ++  + A + +   ++ +H  +++ G    D+ I  A++  Y+K 
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF-DLNIKTALMVAYSKC 342

Query: 395 GIINSACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
             I+ A  +F  +  V++V+SW  +I+GY QNG    A+ +F  M     + PN+ T+ S
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSS 402

Query: 454 ILPA-YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           +L A  +   ++ QG + H+  IK+     + V++ LV MY K G I+ A  +F +    
Sbjct: 403 VLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR 462

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             V WN++IS +  HG G K+L  F +M  + +  D ITF+ +++AC+H+GLV+EGQRYF
Sbjct: 463 DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 522

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            +M +++ I P ++HY CMVDL+ RAG L  A + I  MP    A+IW  LL ACR+H N
Sbjct: 523 DLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 582

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           ++LG +A+++L  +  ++   YVL+SNIYA  G W+   +VR L   + +KK  G+S IE
Sbjct: 583 VQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIE 642

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
           V NK   F  G+ +HP+ ++IY +L  L+ ++K  GY PD  +VL DVEE+ KE IL+ H
Sbjct: 643 VKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQH 702

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SERLAIAFG+I++PP +PIQI KNLRVCGDCH   K IS+I  R+I+VRDSNRFHHFK G
Sbjct: 703 SERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGG 762

Query: 813 ICSCGDYW 820
            CSCGDYW
Sbjct: 763 SCSCGDYW 770



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 253/472 (53%), Gaps = 11/472 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H   +  G ++ V   T LV+ Y     +      FD +  +NV +W S+++ Y + 
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQN 171

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPV---LKACRNLVDGKKIHCSVLKLGFEWDVFV 180
           G   +A+  F Q  L  G++P+ +TF  V   L A   +  G ++H  V+K G +  +FV
Sbjct: 172 GLNEQALKLFSQMQL-EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFV 230

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             S+++MY +  + + A+ +FD M  R++ SWN+MI+G+  +G  +EA ++   MRLEGV
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +     A+++ +CA    +     +H  ++K+G +F+L +   L+  Y+K   +  A +
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350

Query: 301 VFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVS-LTSIVAQ 357
           +F  M   ++VVSW +II+ Y Q+     A   F  M ++ G++P+  T  S L +  A 
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAP 410

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                  +  H   ++ G F   + + +A+V MYAK G I SA  VF+    +D++SWN+
Sbjct: 411 TASVEQGKQFHSCSIKSG-FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 469

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I+GYAQ+G   +++++F+ M   N +  +  T++ ++ A +H G + +G +    ++K+
Sbjct: 470 MISGYAQHGCGKKSLKIFEEMRSKN-LELDGITFIGVISACTHAGLVNEGQRYFDLMVKD 528

Query: 478 CLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
                     +C+VD+Y + G ++ AM L  ++P  + +  W  +++   +H
Sbjct: 529 YHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/742 (38%), Positives = 431/742 (58%), Gaps = 15/742 (2%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y   G ++ +   F  I + N  +W  +++ + R G   EA+  +Y+  +  GLRPD  
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALG-YYRRMVLEGLRPDGA 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDD 203
            F   +  C   ++L  G+ +H  +L+    E+D+ +  +L+ MY R     +ARK FD+
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEM---RLEGVSMDPITVASILPVCARSDNI 260
           M  +   +WNA+I+GY ++G+   AL I  +M     EG+  D IT +S L  C+   +I
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  I    V  G   +  V N LINMY+K G +  A +VFD++  RDV++WN++I+ Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            +      A   F  M     +P+++T + L +    L D    R++H  +   G +  D
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG-YESD 298

Query: 381 VIIGNAVVDMYAKLGI-INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           ++IGN +++MY K    +  A  VFE L  +DVI+WN LI  Y Q G A +A+++F+ M+
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             N + PN+ T  ++L A + +GA RQG  +HA +       DV +   L++MY +CG +
Sbjct: 359 LEN-VAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           DD + +F  +   S V W+ +I+ +  HG     L  F ++L EG+  D +T VS L+AC
Sbjct: 418 DDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSAC 477

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH G++ EG + F  M  + G+ P  +H+ CMVDL  RAG L  A N I +MP  PDA  
Sbjct: 478 SHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA 537

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV-LMSNIYANVGKWEGVDEVRSLAR 678
           W +LL  C++H + +  A  +D+LFE++SE+    V L+SN+YA  G+W   D+VR    
Sbjct: 538 WTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRN 594

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            R  +K PG S IE+N+ V  F  G+++HP+ E I  E++ L+ +MK  GYVPD   VL 
Sbjct: 595 RRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLH 654

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           +V+E+EKE +L  HSE+LAIA+G+IS+PP +P+ I KNLR C DCH   KFIS+I  R+I
Sbjct: 655 NVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKI 714

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           +VRDS RFHHF++G CSC DYW
Sbjct: 715 VVRDSTRFHHFENGSCSCKDYW 736



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 265/518 (51%), Gaps = 13/518 (2%)

Query: 56  SCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           S   L   + LHA+++ +  ++  +   T L+  YA   DL  +R TFD +  + + TWN
Sbjct: 70  SSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTS--GLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           ++I+ Y R G    A+  +      S  G++PD  TF   L AC    ++  G++I    
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEART 189

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  G+  D  V  +L++MY + G    ARK+FD +  RD  +WN MISGY + G A +AL
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           ++   M       + +T   +L  C   +++  G  IH  + +HG E +L + N L+NMY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMY 309

Query: 290 AK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
            K    +  A +VF+++  RDV++WN +I AY Q      A   F  MQ   + P+ +TL
Sbjct: 310 TKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            ++ S  A L   R  ++VH  I   G    DV++ N++++MY + G ++    VF  + 
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIA-SGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR 428

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            K ++SW+TLI  YAQ+G +   +E F ++++E   +  +  T VS L A SH G L++G
Sbjct: 429 DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQE--GLAADDVTMVSTLSACSHGGMLKEG 486

Query: 468 IKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
           ++    ++ +  L  D     C+VD+  + GR++ A +L + +P    +V W +++S   
Sbjct: 487 VQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCK 546

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           +H    +A     ++ +     +H T   L    + +G
Sbjct: 547 LHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAG 584



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 210/419 (50%), Gaps = 35/419 (8%)

Query: 23  HRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTV 79
           HR       + +  SP+ ++ ++  I F     +C+ +  +   + + A  V SG     
Sbjct: 141 HRGALKIYQDMVSKSPEGMKPDA--ITFSSALYACSVVGDISQGREIEARTVASGYASDS 198

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
                L+N Y+  G L  +R  FD +  R+V  WN+MIS Y + G  ++A++ F Q    
Sbjct: 199 IVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF-QRMGP 257

Query: 140 SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMY--CRFGLA 194
           +  +P+  TF  +L AC NL D   G+ IH  V + G+E D+ +   LL+MY  C   L 
Sbjct: 258 NDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLE 317

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR++F+ +  RD  +WN +I  Y Q G A +ALDI  +M+LE V+ + IT++++L  C
Sbjct: 318 E-ARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSAC 376

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           A       G  +H  I     + ++ + N+L+NMY + G +   + VF  + ++ +VSW+
Sbjct: 377 AVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWS 436

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++IAAY Q     T    F  + Q G+  D +T+VS  S  +           HG +++ 
Sbjct: 437 TLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS-----------HGGMLKE 485

Query: 375 GWFMEDVIIGN-----------AVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITG 421
           G      ++G+            +VD+ ++ G + +A  +   +P + D ++W +L++G
Sbjct: 486 GVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/780 (37%), Positives = 447/780 (57%), Gaps = 19/780 (2%)

Query: 51  DDLFQSCTKLHHVKR-------LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +D+F +  +L   KR       ++++ + S     V      +  +   G+L  + + F 
Sbjct: 94  EDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFG 153

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +S RN+++WN ++  Y + G   EA+  +++     G++PD YTFP VL+ C  + D  
Sbjct: 154 KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK++H  V++ G+E D+ V  +L+ MY + G    AR LFD MP RD  SWNAMISGY 
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273

Query: 221 QSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           ++G   E L++   MR  G+S+DP  +T+ S++  C    +   G  IH Y++  G   +
Sbjct: 274 ENGMCHEGLELFFAMR--GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           + V N+L  MY   G  R A ++F +M  +D+VSW ++I+ YE +  P  A   +  M Q
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             ++PD +T+ ++ S  A L D      +H   ++    +  VI+ N +++MY+K   I+
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCID 450

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  +F  +P K+VISW ++I G   N    EA+   + M+    + PN  T  + L A 
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAAC 508

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +GAL  G +IHA V++  +  D F+   L+DMY +CGR++ A S F    +     WN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWN 567

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +++ +   GQG   +  F +M+   VRPD ITF+SLL  CS S +V +G  YF  M E+
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-ED 626

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +G+ P+LKHY C+VDL GRAG L  AH FIQ MPV PD ++WGALL ACRIH  ++LG +
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL 686

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           ++  +FE+D ++VGYY+L+ N+YA+ GKW  V +VR + ++ GL    G S +EV  KV 
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F + ++ HP+ ++I   L     KM  +G          D  E  ++ I   HSER AI
Sbjct: 747 AFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAI 806

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+I++ P  PI + KNL +C +CH+  KFIS+   REI VRD+  FHHFKDG CSCGD
Sbjct: 807 AFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 13/420 (3%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           + G C +G   EA+ +L+ M+   V++D     +++ +C        G  ++   +    
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
              + + N  + M+ +FG +  A  VF +M ER++ SWN ++  Y +      A   +  
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 336 MQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           M    G++PD+ T   +      + D    + VH  ++R G+ + D+ + NA++ MY K 
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL-DIDVVNALITMYVKC 244

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G + SA  +F+ +P +D+ISWN +I+GY +NG+  E +E+F  M   + ++P+  T  S+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSV 303

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           + A   +G  R G  IHA VI      D+ V   L  MY   G   +A  LF ++ R   
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W  +IS +  +   DKA++ +R M  + V+PD IT  ++L+AC+  G +  G      
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL--- 420

Query: 575 MQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
              +  IK  L  Y      +++++ +   +  A +   N+P R +   W +++   R++
Sbjct: 421 --HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G   NG   EA+++   M+E   +  ++  +V+++       A  +G K+++  + +   
Sbjct: 68  GLCANGKLEEAMKLLNSMQEL-RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             V +    + M+ + G + DA  +F ++   +   WN ++  +   G  D+A+  + +M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186

Query: 541 L-DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           L   GV+PD  TF  +L  C     ++ G+   H+    +G +  +     ++ ++ + G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 600 HLGMAHNFIQNMPVRPDASIWGALL------GACRIHGNMEL 635
            +  A      MP R D   W A++      G C  H  +EL
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMC--HEGLEL 284


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 296/704 (42%), Positives = 420/704 (59%), Gaps = 38/704 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRD 208
           +L  C++  + K+IH  ++K G     F  + L+  +C    FG  + A  LF+ +   +
Sbjct: 38  LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQPN 96

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN MI G   S + V A+D    M L GV  +  T   +L  CA+      G  IH 
Sbjct: 97  QFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHA------------------------------ 298
           +++K GLE + FV  +LINMYA+ G + +A                              
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216

Query: 299 -LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
             R+F+++  RD VSWN++IA Y QS     A  FF  M++A + P+  T+V++ S  AQ
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                    V  +I   G    ++ + NA++DMY+K G ++ A  +FEG+  KD+ISWN 
Sbjct: 277 SGSLELGNWVRSWIEDHG-LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I GY+      EA+ +F+ M++ N + PN  T+VSILPA +++GAL  G  IHA + K 
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 478 CLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
            L   +  + T L+DMY KCG I+ A  +F  +   S   WNA+IS   +HG  + AL  
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           FRQM DEG  PD ITFV +L+ACSH+GLV  G++ F  M E++ I P L+HYGCM+DL G
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG    A   ++NM ++PD +IWG+LLGACR+HGN+ELG  A+  LFE++ EN G YVL
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  G+W+ V  +R+   D+G+KK PG SSIEV++ V  F  G++ H + + IY  
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKM 634

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  +   ++  G+VPD S VL D++E+ KE  L+ HSE+LAIAFG+IS+ P++ I+I KN
Sbjct: 635 LDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKN 694

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCG+CH+  K IS+I  REII RD NRFHHFKDG CSC DYW
Sbjct: 695 LRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 275/517 (53%), Gaps = 46/517 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L  +C    ++K++H+ ++ +G   T F+ +KL+ F A    G+LS++   F+ I   N 
Sbjct: 38  LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQ 97

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHC 167
           + WN+MI           A+D FY   L  G+ P+ YTFP +LK+C  +    +GK+IH 
Sbjct: 98  FIWNTMIRGNSLSSSPVGAID-FYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156

Query: 168 SVLKLGFEWDVFVAASLLHMYCR---FGLANV---------------------------- 196
            VLKLG E D FV  SL++MY +    G A +                            
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR+LF+++PVRD+ SWNAMI+GY QSG   EAL    EM+   V+ +  T+ ++L  CA+
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S ++  G  +  +I  HGL  NL + N LI+MY+K G +  A  +F+ + E+D++SWN +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y   N    A   F  MQQ+ ++P+ +T VS+    A L      + +H +I ++  
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFL 396

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + +  +  +++DMYAK G I +A  VF G+  K + SWN +I+G A +G A+ A+E+F+
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVDM 492
            M +     P+  T+V +L A SH G +  G +  + ++++   +D+        C++D+
Sbjct: 457 QMRD-EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVED---YDISPKLQHYGCMIDL 512

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
            G+ G  D+A +L   +  +     W +++    +HG
Sbjct: 513 LGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 219/532 (41%), Gaps = 60/532 (11%)

Query: 44  ESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS-- 98
           E     F  L +SC K+      K++H  ++  G     F  T L+N YA  G+L ++  
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 99  -----------------------------RHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
                                        R  F+ I  R+  +WN+MI+ Y + GR  EA
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLH 186
           +  F+Q    + + P+  T   VL AC    +L  G  +   +   G   ++ +  +L+ 
Sbjct: 249 L-AFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALID 307

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY + G  + AR LF+ +  +D  SWN MI GY    +  EAL +  +M+   V  + +T
Sbjct: 308 MYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVT 367

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFDQM 305
             SILP CA    +  G  IH YI K  L   N  +  +LI+MYAK G +  A +VF  M
Sbjct: 368 FVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
             + + SWN++I+          A   F  M+  G +PD +T V + S  +        R
Sbjct: 428 KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR 487

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQ 424
                ++        +     ++D+  + G+ + A A+ + + +K D   W +L+     
Sbjct: 488 QCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRV 547

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-------IKN 477
           +G         + + E    NP  G YV +   Y+  G      +I  ++       +  
Sbjct: 548 HGNVELGEFAAKHLFELEPENP--GAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPG 605

Query: 478 CLCFDV--FVATCLV---------DMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           C   +V   V   LV         D+Y     ID  +     VP +S V ++
Sbjct: 606 CSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYD 657


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/639 (43%), Positives = 417/639 (65%), Gaps = 17/639 (2%)

Query: 194  ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV----SMDPITVAS 249
            +N+A   +  +   +  SWN++I+   + G++VEAL     +R  G+    S  P T+ S
Sbjct: 1965 SNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKS 2024

Query: 250  ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
               +C    +++SG + H      G E +LFVS+ LI+MY+K G ++ A  +FD++  R+
Sbjct: 2025 CSALC----DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRN 2080

Query: 310  VVSWNSIIAAYEQSNDPITAHGFF-------TTMQQAGIQP-DLLTLVSLTSIVAQLNDC 361
            VVSW S+I  Y Q+     A   F       T ++     P D + +VS+ S  ++++  
Sbjct: 2081 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 2140

Query: 362  RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              +  VHGF++++G F   + +GN ++D YAK G    +  VF+ +  KD ISWN++I  
Sbjct: 2141 GITEGVHGFVVKKG-FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 2199

Query: 422  YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            YAQ+GL+ EA+EVF  M     +  N  T  ++L A +H GALR G  IH +VIK  L +
Sbjct: 2200 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 2259

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            +V V T ++DMY KCGR++ A   F ++   +   W A+++ +G+HG+  +AL+ F +M+
Sbjct: 2260 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 2319

Query: 542  DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
              GV+P++ITFVS+L ACSH+GLV EG  +F+ M+ ++ I+P ++HYGCMVDLFGRAG L
Sbjct: 2320 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 2379

Query: 602  GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
              A+N I+ M ++PD  +WG+LLGACRIH N++LG +A+ +LFE+D +N GYYVL+SN+Y
Sbjct: 2380 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 2439

Query: 662  ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
            A+ G+W  V+ +R L ++R L K PG+S +E+  +V +F  G++ HP +E IY  L  LT
Sbjct: 2440 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 2499

Query: 722  AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             +++ +GYVP+ + VL DV+E+EKE IL  HSE+LA+AFG+++S P + I I KNLRVCG
Sbjct: 2500 LELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCG 2559

Query: 782  DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   K IS++  R+ +VRDS RFHHFKDG+CSCGDYW
Sbjct: 2560 DCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 262/499 (52%), Gaps = 24/499 (4%)

Query: 102  FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---N 158
            + ++   NV++WNS+I+   R G   EA+  F       GL P   +FP  +K+C    +
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLR-KLGLIPTRSSFPCTIKSCSALCD 2030

Query: 159  LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
            LV G+  H      GFE D+FV+++L+ MY + G    AR LFD++P+R+  SW +MI+G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090

Query: 219  YCQSGNAVEAL----DIL-DEMRLE---GVSMDPITVASILPVCAR--SDNILSGLLIHL 268
            Y Q+  A  AL    D L +E  +E    V +D + + S+L  C+R     I  G  +H 
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHG 2148

Query: 269  YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            ++VK G + ++ V N L++ YAK G    + +VFD M E+D +SWNS+IA Y QS     
Sbjct: 2149 FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 2208

Query: 329  AHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  M +  G++ + +TL ++    A     R  + +H  +++      +V +G ++
Sbjct: 2209 ALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD-LEYNVCVGTSI 2267

Query: 388  VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
            +DMY K G +  A   F+ +  K+V SW  ++ GY  +G A EA+++F  M     + PN
Sbjct: 2268 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-VKPN 2326

Query: 448  QGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
              T+VS+L A SH G + +G    +A   K  +   +    C+VD++G+ G +++A +L 
Sbjct: 2327 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 2386

Query: 507  YQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC-SHSGL 564
             ++  +   V W +++    IH   D      +++ +  + PD+  +  LL+   + +G 
Sbjct: 2387 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE--LDPDNCGYYVLLSNLYADAGR 2444

Query: 565  VSEGQRYFHMMQEEFGIKP 583
             ++ +R   +M+    +KP
Sbjct: 2445 WADVERMRMLMKNRQLVKP 2463



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 186/370 (50%), Gaps = 33/370 (8%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  I++ GL  +  ++  LI++Y+  G + +A+ +F Q+      +WN II A   +  
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   +  M   GI  D  T   +             + VHG +++ G F  DV + N
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG-FSGDVFVQN 164

Query: 386 AVVDMYAKLGIINSACAVFEGL-------------------------------PVKDVIS 414
            ++D Y K G    A  VFE +                               P K+V+S
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W  +I GY +N    EA+E+F+ M+  N I PN+ T VS++ A + +G L  G  IH   
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           IKNC+   V++ T L+DMY KCG I DA+ +F  +PR S   WN++I+  G+HG G +AL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           N F +M    V+PD ITF+ +L AC H   V EG  YF  M + +GI P  +HY CM +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 595 FGRAGHLGMA 604
           + R+ +L  A
Sbjct: 404 YARSNNLDEA 413



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 189/377 (50%), Gaps = 36/377 (9%)

Query: 67   HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
            H    V G    +F S+ L++ Y+  G L  +R  FD I  RNV +W SMI+ YV+  + 
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097

Query: 127  SEAVDCFYQFTLTSGLRPDFYTFP-------PVLKACRNLVDGKKI----HCSVLKLGFE 175
              A+  F  F        D    P        VL AC   V GK I    H  V+K GF+
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR-VSGKGITEGVHGFVVKKGFD 2156

Query: 176  WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
              + V  +L+  Y + G   V++K+FD M  +D  SWN+MI+ Y QSG + EAL++   M
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216

Query: 236  -RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
             R  GV  + +T++++L  CA +  + +G  IH  ++K  LE+N+ V  ++I+MY K G 
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276

Query: 295  MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
            +  A + FD+M E++V SW +++A Y        A   F  M +AG++P+ +T VS+ + 
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336

Query: 355  VAQLNDCRNSRSVHGFIMRRGW-------FMEDVIIG----NAVVDMYAKLGIINSACAV 403
             +           H  ++  GW          D+  G      +VD++ + G +N A  +
Sbjct: 2337 CS-----------HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 2385

Query: 404  FEGLPVK-DVISWNTLI 419
             + + +K D + W +L+
Sbjct: 2386 IKRMKMKPDFVVWGSLL 2402



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 190/397 (47%), Gaps = 34/397 (8%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           +L+ C+N    ++IH  +++ G   D  +   L+H+Y   G    A  LF  +    + +
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN +I     +G + +AL +   M  +G++ D  T   ++  C    +I  G ++H  ++
Sbjct: 93  WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA------------- 318
           K+G   ++FV NNLI+ Y K G  R AL+VF++M  R+VVSW ++I+             
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212

Query: 319 ------------------AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
                              Y ++  P  A   F  MQ   I P+  T+VSL     ++  
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H + ++    +  V +G A++DMY+K G I  A  VFE +P K + +WN++IT
Sbjct: 273 LTLGRGIHDYAIKNCIEI-GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
               +GL  EA+ +F  ME  N + P+  T++ +L A  H+  +++G     R+ ++   
Sbjct: 332 SLGVHGLGQEALNLFSEMERVN-VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390

Query: 481 FDVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
             +     C+ ++Y +   +D+A     +V   ++ P
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSP 427



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 35/333 (10%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L Q+C    H++++HA ++ SG       + KL++ Y+  G ++++   F  I     +T
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN +I      G LSE     Y+  +  G+  D +TFP V+KAC N +    GK +H S+
Sbjct: 93  WNLIIRANTING-LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 170 LKLGFEWDVFVAASLLHMY-----CRFGLA--------NV------------------AR 198
           +K GF  DVFV  +L+  Y      RF L         NV                  AR
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++FD++P ++  SW AMI+GY ++    EAL++   M+ E +  +  T+ S++  C    
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  IH Y +K+ +E  +++   LI+MY+K G ++ A+ VF+ M  + + +WNS+I 
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           +         A   F+ M++  ++PD +T + +
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 26/312 (8%)

Query: 30   AANSLQISPDCLENESREIDFDDL----------FQSCTKLHH---VKRLHALLVVSGKI 76
            A N+L +  D LE E+   D +++            +C+++      + +H  +V  G  
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156

Query: 77   KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
             ++     L++ YA  G    S+  FD +  ++  +WNSMI+VY + G   EA++ F+  
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216

Query: 137  TLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
                G+R +  T   VL AC +   L  GK IH  V+K+  E++V V  S++ MYC+ G 
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276

Query: 194  ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              +A+K FD M  ++  SW AM++GY   G A EALDI  +M   GV  + IT  S+L  
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336

Query: 254  CARSDNILSG-----LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-ME 307
            C+ +  +  G      + H Y ++ G+E        +++++ + G +  A  +  +M M+
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMK 2392

Query: 308  RDVVSWNSIIAA 319
             D V W S++ A
Sbjct: 2393 PDFVVWGSLLGA 2404



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 4/202 (1%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           +++ V S T +++   + GDL  +R  FD I  +NV +W +MI+ Y+R  +  EA++ F 
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 246

Query: 135 QFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +      + P+ YT   ++KAC     L  G+ IH   +K   E  V++  +L+ MY + 
Sbjct: 247 RMQ-AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    A ++F+ MP +   +WN+MI+     G   EAL++  EM    V  D IT   +L
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365

Query: 252 PVCARSDNILSGLLIHLYIVKH 273
             C    N+  G      + +H
Sbjct: 366 CACVHIKNVKEGCAYFTRMTQH 387



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 10/199 (5%)

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           LRQ   IHA++I++ L  D  +   L+ +Y   GRI  A+ LFYQ+    +  WN II  
Sbjct: 43  LRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           + I+G  ++AL  ++ M+ +G+  D  TF  ++ AC++   +  G +  H    ++G   
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG-KVVHGSLIKYGFSG 158

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            +     ++D + + GH   A    + M VR   S W  ++      G+++     + R+
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS-WTTVISGLISCGDLQ----EARRI 213

Query: 644 F-EVDSENVGYYVLMSNIY 661
           F E+ S+NV  +  M N Y
Sbjct: 214 FDEIPSKNVVSWTAMINGY 232


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 312/829 (37%), Positives = 471/829 (56%), Gaps = 60/829 (7%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-- 105
           I    L + C  L + K  H  + V G    +FS    V  Y   G  + +      +  
Sbjct: 31  IPLISLLRQCKTLINAKLAHQQIFVHG-FTEMFSYA--VGAYIECGASAEAVSLLQRLIP 87

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDG 162
           S+  V+ WN++I   V+ G L + +  FY      G  PD YTFP VLKAC    +L  G
Sbjct: 88  SHSTVFWWNALIRRSVKLGLLDDTLG-FYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHG 146

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM---PVRDSGSWNAMISGY 219
             +H  V   G   +VF+  S++ MY R G  + A ++FD++    + D  SWN++++ Y
Sbjct: 147 ASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAY 206

Query: 220 CQSGNAVEALDILDEMRLE---GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
            Q G +  AL I   M       +  D IT+ +ILP CA    +  G  +H + V++GL 
Sbjct: 207 VQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLV 266

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN------------ 324
            ++FV N L++MYAK   M  A +VF+ + ++DVVSWN+++  Y Q              
Sbjct: 267 DDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMM 326

Query: 325 -------DPIT-----------AHGF-----FTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
                  D IT            HGF     F  MQ  G++P+++TL SL S  A +   
Sbjct: 327 QEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGAL 386

Query: 362 RNSRSVHGFIMRR----GW--FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD--VI 413
              +  H ++++      W    +D+++ N ++DMYAK      A ++F+ +  KD  V+
Sbjct: 387 LYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVV 446

Query: 414 SWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +W  +I GYAQ+G A++A+++F Q+ ++   + PN  T    L A + +G LR G ++HA
Sbjct: 447 TWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHA 506

Query: 473 RVIKNCLCFDV-FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
             ++N    +V +V  CL+DMY K G ID A ++F  +   + V W ++++ +G+HG+G+
Sbjct: 507 YALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGE 566

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL+ F QM   G   D ITF+ +L ACSHSG+V +G  YFH M + FGI P  +HY CM
Sbjct: 567 EALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACM 626

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GRAG L  A   I+NM + P A +W ALL A RIH N+ELG  A+ +L E+ +EN 
Sbjct: 627 VDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAEND 686

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y L+SN+YAN  +W+ V  +RSL +  G++K PG S I+       F+ G+R+HP+ E
Sbjct: 687 GSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESE 746

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +IY+ L +L  ++K +GYVP  SF L DV+++EK  +L  HSE+LA+A+GI+++ P  PI
Sbjct: 747 QIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPI 806

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLR+CGDCH+   +IS I + EI++RDS+RFHHFK G CSC  YW
Sbjct: 807 RIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 275/639 (43%), Positives = 417/639 (65%), Gaps = 17/639 (2%)

Query: 194  ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV----SMDPITVAS 249
            +N+A   +  +   +  SWN++I+   + G++VEAL     +R  G+    S  P T+ S
Sbjct: 1092 SNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKS 1151

Query: 250  ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
               +C    +++SG + H      G E +LFVS+ LI+MY+K G ++ A  +FD++  R+
Sbjct: 1152 CSALC----DLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRN 1207

Query: 310  VVSWNSIIAAYEQSNDPITAHGFF-------TTMQQAGIQP-DLLTLVSLTSIVAQLNDC 361
            VVSW S+I  Y Q+     A   F       T ++     P D + +VS+ S  ++++  
Sbjct: 1208 VVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGK 1267

Query: 362  RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              +  VHGF++++G F   + +GN ++D YAK G    +  VF+ +  KD ISWN++I  
Sbjct: 1268 GITEGVHGFVVKKG-FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 1326

Query: 422  YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            YAQ+GL+ EA+EVF  M     +  N  T  ++L A +H GALR G  IH +VIK  L +
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            +V V T ++DMY KCGR++ A   F ++   +   W A+++ +G+HG+  +AL+ F +M+
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446

Query: 542  DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
              GV+P++ITFVS+L ACSH+GLV EG  +F+ M+ ++ I+P ++HYGCMVDLFGRAG L
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 1506

Query: 602  GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
              A+N I+ M ++PD  +WG+LLGACRIH N++LG +A+ +LFE+D +N GYYVL+SN+Y
Sbjct: 1507 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 1566

Query: 662  ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
            A+ G+W  V+ +R L ++R L K PG+S +E+  +V +F  G++ HP +E IY  L  LT
Sbjct: 1567 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 1626

Query: 722  AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             +++ +GYVP+ + VL DV+E+EKE IL  HSE+LA+AFG+++S P + I I KNLRVCG
Sbjct: 1627 LELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCG 1686

Query: 782  DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   K IS++  R+ +VRDS RFHHFKDG+CSCGDYW
Sbjct: 1687 DCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 262/499 (52%), Gaps = 24/499 (4%)

Query: 102  FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---N 158
            + ++   NV++WNS+I+   R G   EA+  F       GL P   +FP  +K+C    +
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLR-KLGLIPTRSSFPCTIKSCSALCD 1157

Query: 159  LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
            LV G+  H      GFE D+FV+++L+ MY + G    AR LFD++P+R+  SW +MI+G
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217

Query: 219  YCQSGNAVEAL----DIL-DEMRLE---GVSMDPITVASILPVCAR--SDNILSGLLIHL 268
            Y Q+  A  AL    D L +E  +E    V +D + + S+L  C+R     I  G  +H 
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHG 1275

Query: 269  YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            ++VK G + ++ V N L++ YAK G    + +VFD M E+D +SWNS+IA Y QS     
Sbjct: 1276 FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 1335

Query: 329  AHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  M +  G++ + +TL ++    A     R  + +H  +++      +V +G ++
Sbjct: 1336 ALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD-LEYNVCVGTSI 1394

Query: 388  VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
            +DMY K G +  A   F+ +  K+V SW  ++ GY  +G A EA+++F  M     + PN
Sbjct: 1395 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-VKPN 1453

Query: 448  QGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
              T+VS+L A SH G + +G    +A   K  +   +    C+VD++G+ G +++A +L 
Sbjct: 1454 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 1513

Query: 507  YQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC-SHSGL 564
             ++  +   V W +++    IH   D      +++ +  + PD+  +  LL+   + +G 
Sbjct: 1514 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE--LDPDNCGYYVLLSNLYADAGR 1571

Query: 565  VSEGQRYFHMMQEEFGIKP 583
             ++ +R   +M+    +KP
Sbjct: 1572 WADVERMRMLMKNRQLVKP 1590



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 186/370 (50%), Gaps = 33/370 (8%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  I++ GL  +  ++  LI++Y+  G + +A+ +F Q+      +WN II A   +  
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   +  M   GI  D  T   +             + VHG +++ G F  DV + N
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG-FSGDVFVQN 164

Query: 386 AVVDMYAKLGIINSACAVFEGL-------------------------------PVKDVIS 414
            ++D Y K G    A  VFE +                               P K+V+S
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W  +I GY +N    EA+E+F+ M+  N I PN+ T VS++ A + +G L  G  IH   
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAEN-IFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           IKNC+   V++ T L+DMY KCG I DA+ +F  +PR S   WN++I+  G+HG G +AL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           N F +M    V+PD ITF+ +L AC H   V EG  YF  M + +GI P  +HY CM +L
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTEL 403

Query: 595 FGRAGHLGMA 604
           + R+ +L  A
Sbjct: 404 YARSNNLDEA 413



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 197/397 (49%), Gaps = 39/397 (9%)

Query: 50   FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
            F    +SC+ L  +   +  H    V G    +F S+ L++ Y+  G L  +R  FD I 
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 1204

Query: 107  YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP-------PVLKACRNL 159
             RNV +W SMI+ YV+  +   A+  F  F        D    P        VL AC   
Sbjct: 1205 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR- 1263

Query: 160  VDGKKI----HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
            V GK I    H  V+K GF+  + V  +L+  Y + G   V++K+FD M  +D  SWN+M
Sbjct: 1264 VSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSM 1323

Query: 216  ISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
            I+ Y QSG + EAL++   M R  GV  + +T++++L  CA +  + +G  IH  ++K  
Sbjct: 1324 IAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMD 1383

Query: 275  LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
            LE+N+ V  ++I+MY K G +  A + FD+M E++V SW +++A Y        A   F 
Sbjct: 1384 LEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFY 1443

Query: 335  TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-------FMEDVIIG--- 384
             M +AG++P+ +T VS+ +  +           H  ++  GW          D+  G   
Sbjct: 1444 KMVRAGVKPNYITFVSVLAACS-----------HAGLVEEGWHWFNAMKHKYDIEPGIEH 1492

Query: 385  -NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
               +VD++ + G +N A  + + + +K D + W +L+
Sbjct: 1493 YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 190/397 (47%), Gaps = 34/397 (8%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           +L+ C+N    ++IH  +++ G   D  +   L+H+Y   G    A  LF  +    + +
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN +I     +G + +AL +   M  +G++ D  T   ++  C    +I  G ++H  ++
Sbjct: 93  WNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI 152

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA------------- 318
           K+G   ++FV NNLI+ Y K G  R AL+VF++M  R+VVSW ++I+             
Sbjct: 153 KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARR 212

Query: 319 ------------------AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
                              Y ++  P  A   F  MQ   I P+  T+VSL     ++  
Sbjct: 213 IFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGI 272

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H + ++    +  V +G A++DMY+K G I  A  VFE +P K + +WN++IT
Sbjct: 273 LTLGRGIHDYAIKNCIEI-GVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
               +GL  EA+ +F  ME  N + P+  T++ +L A  H+  +++G     R+ ++   
Sbjct: 332 SLGVHGLGQEALNLFSEMERVN-VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390

Query: 481 FDVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
             +     C+ ++Y +   +D+A     +V   ++ P
Sbjct: 391 APIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSP 427



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 35/333 (10%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L Q+C    H++++HA ++ SG       + KL++ Y+  G ++++   F  I     +T
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFT 92

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN +I      G LSE     Y+  +  G+  D +TFP V+KAC N +    GK +H S+
Sbjct: 93  WNLIIRANTING-LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 170 LKLGFEWDVFVAASLLHMY-----CRFGLA--------NV------------------AR 198
           +K GF  DVFV  +L+  Y      RF L         NV                  AR
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++FD++P ++  SW AMI+GY ++    EAL++   M+ E +  +  T+ S++  C    
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  IH Y +K+ +E  +++   LI+MY+K G ++ A+ VF+ M  + + +WNS+I 
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           +         A   F+ M++  ++PD +T + +
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 157/312 (50%), Gaps = 26/312 (8%)

Query: 30   AANSLQISPDCLENESREIDFDDL----------FQSCTKLHH---VKRLHALLVVSGKI 76
            A N+L +  D LE E+   D +++            +C+++      + +H  +V  G  
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283

Query: 77   KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
             ++     L++ YA  G    S+  FD +  ++  +WNSMI+VY + G   EA++ F+  
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343

Query: 137  TLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
                G+R +  T   VL AC +   L  GK IH  V+K+  E++V V  S++ MYC+ G 
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403

Query: 194  ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              +A+K FD M  ++  SW AM++GY   G A EALDI  +M   GV  + IT  S+L  
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463

Query: 254  CARSDNILSG-----LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-ME 307
            C+ +  +  G      + H Y ++ G+E        +++++ + G +  A  +  +M M+
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMK 1519

Query: 308  RDVVSWNSIIAA 319
             D V W S++ A
Sbjct: 1520 PDFVVWGSLLGA 1531



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 4/202 (1%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           +++ V S T +++   + GDL  +R  FD I  +NV +W +MI+ Y+R  +  EA++ F 
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFK 246

Query: 135 QFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +      + P+ YT   ++KAC     L  G+ IH   +K   E  V++  +L+ MY + 
Sbjct: 247 RMQ-AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    A ++F+ MP +   +WN+MI+     G   EAL++  EM    V  D IT   +L
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365

Query: 252 PVCARSDNILSGLLIHLYIVKH 273
             C    N+  G      + +H
Sbjct: 366 CACVHIKNVKEGCAYFTRMTQH 387



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 10/199 (5%)

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           LRQ   IHA++I++ L  D  +   L+ +Y   GRI  A+ LFYQ+    +  WN II  
Sbjct: 43  LRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           + I+G  ++AL  ++ M+ +G+  D  TF  ++ AC++   +  G +  H    ++G   
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLG-KVVHGSLIKYGFSG 158

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            +     ++D + + GH   A    + M VR   S W  ++      G+++     + R+
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS-WTTVISGLISCGDLQ----EARRI 213

Query: 644 F-EVDSENVGYYVLMSNIY 661
           F E+ S+NV  +  M N Y
Sbjct: 214 FDEIPSKNVVSWTAMINGY 232


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/722 (39%), Positives = 436/722 (60%), Gaps = 8/722 (1%)

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL-KACR--NL 159
           D  +   + + N ++S Y+  G+ S  + CF    + S L  D  TF  VL  A R  +L
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDM-VESDLECDQVTFILVLATAVRLDSL 338

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G+++HC  LKLG +  + V+ SL++MYC+     +AR +F++M  RD  SWN++I+G 
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFN 278
            QS   VEA+ +  ++   G+  D  T+ S+L   +     LS    IH++ +K     +
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FVS  LI+ Y++   M+ A  +F +    D+V+WN++++ Y QS+D       F  M +
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFGRN-NFDLVAWNAMMSGYTQSHDGHKTLELFALMHK 517

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G + D  TL ++      L      + VH + ++ G+ + D+ + + ++DMY K G ++
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDL-DLWVSSGILDMYVKCGDMS 576

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
           +A   F+ +PV D ++W TLI+G  +NG    A+ VF  M     + P++ T  ++  A 
Sbjct: 577 AAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMG-VLPDEFTIATLAKAS 635

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           S + AL QG +IHA  +K     D FV T LVDMY KCG IDDA  LF ++   +   WN
Sbjct: 636 SCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 695

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           A++     HG+G +AL  F+QM   G++PD +TF+ +L+ACSHSGLVSE  +Y   M  +
Sbjct: 696 AMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRD 755

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GIKP ++HY C+ D  GRAG +  A N I +M +   AS++  LL ACR+ G+ E G  
Sbjct: 756 YGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKR 815

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            + +L E++  +   YVL+SN+YA   KW+ +   R++ +   +KK PG+S IEV NK+ 
Sbjct: 816 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 875

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
           +F   +R++P+ E IY +++++   +K  GYVP+  F L DVEE+EKE  L  HSE+LA+
Sbjct: 876 LFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAV 935

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG++S+PP +PI++ KNLRVCGDCHN  K+IS++ +REI++RD+NRFH FKDGICSCGD
Sbjct: 936 AFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGD 995

Query: 819 YW 820
           YW
Sbjct: 996 YW 997



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 266/590 (45%), Gaps = 51/590 (8%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S + L   K  HA ++   +    F    L++ Y+  G L+++R  FD +  R++ +WNS
Sbjct: 58  STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117

Query: 116 MISVYVRC--GRLSEAVDCFYQFTLTSGLRPDF-----YTFPPVLKACRN---LVDGKKI 165
           +++ Y +   G +    + F  F +   LR D       T  P+LK C +   +   +  
Sbjct: 118 ILAAYAQSSEGVVENVKEAFLLFRI---LRQDVVYTSRMTLSPMLKLCLHSGYVCASESF 174

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H    K+G + D FVA +L+++Y +FG     R LF++MP RD   WN M+  Y + G  
Sbjct: 175 HGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFK 234

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA+D+       G+  + IT+  +  +    D+  +G            +   F + N 
Sbjct: 235 EEAIDLSSAFHTSGLHPNEITLRLLSRISG--DDSEAG------------QVKSFENGN- 279

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
                            D     +++S N I++ Y  +         F  M ++ ++ D 
Sbjct: 280 -----------------DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQ 322

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T + + +   +L+     + VH   ++ G  +  + + N++++MY KL  I  A  VF 
Sbjct: 323 VTFILVLATAVRLDSLALGQQVHCMALKLGLDLM-LTVSNSLINMYCKLRKIGLARTVFN 381

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV-GAL 464
            +  +D+ISWN++I G AQ+ L  EA+ +F  +  C  + P+  T  S+L A S +   L
Sbjct: 382 NMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCG-LKPDHYTMTSVLKAASSLPEGL 440

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
               +IH   IK     D FV+T L+D Y +   + +A  LF +      V WNA++S +
Sbjct: 441 SLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGY 499

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
                G K L  F  M  +G R D  T  ++L  C     +++G++  H    + G    
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQ-VHAYAIKSGYDLD 558

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           L     ++D++ + G +  A     ++PV PD   W  L+  C  +G  E
Sbjct: 559 LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGCIENGEEE 607



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 16/285 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++HA  + SG    ++ S+ +++ Y   GD+S ++  FD I   +   W ++IS  +  
Sbjct: 544 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIEN 603

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFV 180
           G    A+  F Q  L  G+ PD +T   + KA   L     G++IH + LKL    D FV
Sbjct: 604 GEEERALHVFSQMRLM-GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV 662

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY + G  + A  LF  + + +  +WNAM+ G  Q G   EAL +  +M   G+
Sbjct: 663 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGI 722

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIV------KHGLEFNLFVSNNLINMYAKFGM 294
             D +T   +L  C+      SGL+   Y         +G++  +   + L +   + G+
Sbjct: 723 KPDKVTFIGVLSACSH-----SGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGL 777

Query: 295 MRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           ++ A  + D M ME     + +++AA     D  T     T + +
Sbjct: 778 VKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLE 822



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 22/179 (12%)

Query: 56  SC-TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           SC T L   +++HA  +        F  T LV+ YA  G +  +   F  I   N+  WN
Sbjct: 636 SCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 695

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF 174
           +M+    + G   EA+  F Q   + G++PD  TF  VL AC         H  ++   +
Sbjct: 696 AMLVGLAQHGEGKEALQLFKQME-SLGIKPDKVTFIGVLSACS--------HSGLVSEAY 746

Query: 175 EW------DVFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           ++      D  +   + H  C      R GL   A  L D M +  S S    +   C+
Sbjct: 747 KYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACR 805


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 285/777 (36%), Positives = 438/777 (56%), Gaps = 9/777 (1%)

Query: 50   FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
            F  +  +C K+  ++   +LH L++  G     +    LV+ Y +LG L  + H F ++S
Sbjct: 274  FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333

Query: 107  YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
             R+  T+N++I+   +CG   +A++ F +  L  GL PD  T   ++ AC +   L  G+
Sbjct: 334  QRDAVTYNTLINGLSQCGYGEKAMELFKRMQL-DGLEPDSNTLASLVVACSSDGTLFSGQ 392

Query: 164  KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            ++H    KLGF  +  +  +LL++Y +      A   F +  V +   WN M+  Y    
Sbjct: 393  QLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLD 452

Query: 224  NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            +   +  I  +M++E +  +  T  SIL  C R  ++  G  IH  I+K   + N +V +
Sbjct: 453  DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCS 512

Query: 284  NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             LI+MYAK G +  A  +  +   +DVVSW ++IA Y Q N    A   F  M   GI+ 
Sbjct: 513  VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 572

Query: 344  DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
            D + L +  S  A L   +  + +H      G F  D+   NA+V +Y+K G I  A   
Sbjct: 573  DEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSKCGNIEEAYLA 631

Query: 404  FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
            FE     D I+WN L++G+ Q+G   EA+ VF  M     I+ N  T+ S + A S    
Sbjct: 632  FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNR-EGIDSNNFTFGSAVKAASETAN 690

Query: 464  LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
            ++QG ++HA + K     +  V   ++ MY KCG I DA   F ++   + V WNA+I+ 
Sbjct: 691  MKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINA 750

Query: 524  HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
            +  HG G +AL+ F QM+   VRP+H+T V +L+ACSH GLV +G  YF  M  E+G+ P
Sbjct: 751  YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAP 810

Query: 584  HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              +HY C+VD+  RAG L  A +FI  MP+ PDA +W  LL AC +H NME+G  A+  L
Sbjct: 811  KPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHL 870

Query: 644  FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
             E++ E+   YVL+SN+YA   KW+  D  R   +++G+KK PG S IEV N +  FY G
Sbjct: 871  LELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 930

Query: 704  NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
            ++ HP  ++I++  ++LT +   +GYV D   +L ++++++K+  +  HSE+LAI+FG++
Sbjct: 931  DQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLL 990

Query: 764  SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S P   PI + KNLRVC DCH+W KF+S+++ REIIVRD+ RFHHF+ G CSC DYW
Sbjct: 991  SLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 291/592 (49%), Gaps = 17/592 (2%)

Query: 53  LFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L + C K    L   ++LH+ ++  G       S KL++FY   GDL  +   FD +  R
Sbjct: 73  LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR------NLVDG 162
            ++TWN MI   +    LS  V C +   +   + P+  TF  VL+ACR      ++V+ 
Sbjct: 133 TIFTWNKMIK-ELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVE- 190

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            +IH  ++  G      V   L+ +Y R G  + AR++FD + ++D  SW AMISG  ++
Sbjct: 191 -QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKN 249

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
              VEA+ +  +M + G+   P   +S+L  C + +++  G  +H  ++K G   + +V 
Sbjct: 250 ECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 309

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L+++Y   G +  A  +F  M +RD V++N++I    Q      A   F  MQ  G++
Sbjct: 310 NALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLE 369

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  TL SL    +      + + +H +  + G+   D I G A++++YAK   I +A  
Sbjct: 370 PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEG-ALLNLYAKCSDIETALN 428

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F    V++V+ WN ++  Y        +  +F+ M +  EI PNQ TY SIL     +G
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLG 487

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            L  G +IH+++IK     + +V + L+DMY K G++D A  +  +      V W  +I+
Sbjct: 488 DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  +   DKAL  FRQMLD G+R D +   + ++AC+    + EGQ+  H      G  
Sbjct: 548 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFS 606

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             L     +V L+ + G++  A+   +      D   W AL+   +  GN E
Sbjct: 607 SDLPFQNALVTLYSKCGNIEEAYLAFEQTEA-GDNIAWNALVSGFQQSGNNE 657


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 305/825 (36%), Positives = 472/825 (57%), Gaps = 64/825 (7%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVY 111
            + C  L H K LH   ++ G +  +  +T L+  Y      +++    + +  S  +V+
Sbjct: 168 LKECNSLAHAKLLHQQSIMQGLLFHL--ATNLIGTYIASNSTAYAILLLERLPPSPSSVF 225

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKI---HCS 168
            WN +I   +  G   +    + Q   + G  PD YTFP V KAC NL         H +
Sbjct: 226 WWNQLIRRALHLGSPRDVFTLYRQMK-SLGWTPDHYTFPFVFKACANLSSLSLGASLHAT 284

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM---PVRDSGSWNAMISGYCQSGNA 225
           V + GF  +VFV  +++ MY + G    A  +FDD+    ++D  SWN+++S Y  + +A
Sbjct: 285 VSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDA 344

Query: 226 VEALDILDEMRLEGV-SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             AL +  +M    + S D I++ +ILP CA     L G  +H + ++ GL  ++FV N 
Sbjct: 345 NTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNA 404

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN-------------------D 325
           +++MYAK G M  A +VF +M  +DVVSWN+++  Y Q+                    D
Sbjct: 405 VVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD 464

Query: 326 PIT----------------AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
            +T                A   F  M   G +P+++TLVSL S    +    + +  H 
Sbjct: 465 VVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHC 524

Query: 370 FIMRRGWFM----------EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD--VISWNT 417
           + ++   F+          +D+ + N ++DMYAK      A  +F+ +  KD  V++W  
Sbjct: 525 YAIK---FILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581

Query: 418 LITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           +I GYAQ+G A+ A+++F  M + ++ I PN  T    L A + + ALR G ++HA V++
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641

Query: 477 NCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           N      +FVA CL+DMY K G +D A  +F  +P+ ++V W ++++ +G+HG+G+ AL 
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M    + PD ITF+ +L ACSHSG+V  G  +F+ M ++FG+ P  +HY CMVDL+
Sbjct: 702 VFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLW 761

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           GRAG LG A   I  MP+ P   +W ALL ACR+H N+ELG  A++RL E++S N G Y 
Sbjct: 762 GRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYT 821

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SNIYAN  +W+ V  +R   +  G+KK PG S I+    V  FY G+R+HP+ ++IY+
Sbjct: 822 LLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYE 881

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
            L +L  ++K++GYVP  SF L DV+++EK  +L  HSE+LA+A+GI++  P++PI+I K
Sbjct: 882 TLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITK 941

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLR+CGDCH+   +IS+I E EII+RDS+RFHHFK+G CSC  YW
Sbjct: 942 NLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 296/803 (36%), Positives = 443/803 (55%), Gaps = 41/803 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR--NVYTW 113
           SC  +   + LH  +  S   +       L++ Y     L  +R  F+ + +R  NV +W
Sbjct: 19  SCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSW 78

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           N+MI+ Y + G  +EA+  +++  L  GL  D  TF  VL AC +L  G++IH  V   G
Sbjct: 79  NAMIAAYAQNGHSTEALVLYWRMNL-QGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSG 137

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            +    +A +L+ MY RFG    A+++F  +  RD  SWNA+I  + QSG+   AL I  
Sbjct: 138 LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFK 197

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           EM+ + +  +  T  +++   +  + +  G  IH  IV +G + +L V+  LINMY K G
Sbjct: 198 EMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCG 256

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
               A  VFD+M +RD+VSWN +I  Y Q+ D   A   +  +   G +    T VS+  
Sbjct: 257 SSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILG 316

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             + +      R VH  I+ RG    +V +  A+V+MYAK G +  A  VF  +  +D +
Sbjct: 317 ACSSVKALAQGRLVHSHILERG-LDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAV 375

Query: 414 SWNTLITGYA----------------------------------QNGLASEAIEVFQMME 439
           +W+TLI  YA                                  QNG A  A+++F+ M 
Sbjct: 376 AWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMT 435

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
               + P+  T++++L A + +G L +   +HA++ ++ L  +V V   L++MY +CG +
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSL 495

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           ++A  LF      + V W A+++    +G+  +AL+ F++M  EGV+PD +T+ S+L  C
Sbjct: 496 EEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVC 555

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           +H G + +G RYF  M E  G+ P   H+  MVDL GR+G L  A   +++MP  PD   
Sbjct: 556 THGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVA 615

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W   L ACRIHG +ELG  A++R++E+D  +   Y+ MSNIYA  G WE V  VR    +
Sbjct: 616 WMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEE 675

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGLKK PG S IEV+ K+  F +G + HP+ ++I +EL  L   M++ GYVPD   VL D
Sbjct: 676 RGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHD 735

Query: 740 VEEDEKEHILTSHSERLAIAFGIISS-PPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           V E EKE +L  HSE++AIAFG++SS     PI++ KNLRVC DCH  TKFI++I  R+I
Sbjct: 736 VSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDI 795

Query: 799 IVRDSNRFHHF-KDGICSCGDYW 820
           I+RD NRFH F  DG CSCGDYW
Sbjct: 796 ILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 257/524 (49%), Gaps = 48/524 (9%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY 107
           + F  +  +C+ L   + +H  +  SG       +  LV  YA  G +  ++  F  +  
Sbjct: 111 VTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQT 170

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKK 164
           R+  +WN++I  + + G  S A+  F +  +   ++P+  T+  V+        L +G+K
Sbjct: 171 RDETSWNAVILAHSQSGDWSGALRIFKE--MKCDMKPNSTTYINVISGFSTPEVLPEGRK 228

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  ++  GF+ D+ VA +L++MY + G ++ AR++FD M  RD  SWN MI  Y Q+G+
Sbjct: 229 IHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGD 288

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EAL++  ++ +EG      T  SIL  C+    +  G L+H +I++ GL+  + V+  
Sbjct: 289 FHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATA 348

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ------------------SNDP 326
           L+NMYAK G +  A +VF+ M  RD V+W+++I AY                    S D 
Sbjct: 349 LVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDT 408

Query: 327 ITAHGFFTTMQQ-----------------AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           I  +   TT  Q                 AG++PD +T +++    A L      +++H 
Sbjct: 409 ICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHA 468

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            I        +V++ N +++MYA+ G +  A  +F     K V+SW  ++  ++Q G  +
Sbjct: 469 QI-SESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH---ARVIKNCLCFDVFVA 486
           EA+++FQ M +   + P+  TY SIL   +H G+L QG +     A +       D F A
Sbjct: 528 EALDLFQEM-DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAA 586

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
             +VD+ G+ GR+ DA  L   +P     V W   ++   IHG+
Sbjct: 587 --MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGK 628



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 202/391 (51%), Gaps = 10/391 (2%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D +T  ++L  C+   ++  G  +H  I     E +  V N LI+MY K   +  A  VF
Sbjct: 6   DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 303 DQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           + M   +R+VVSWN++IAAY Q+     A   +  M   G+  D +T VS+    + L  
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H  +   G       + NA+V MYA+ G +  A  +F+ L  +D  SWN +I 
Sbjct: 125 --QGREIHNRVFYSG-LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            ++Q+G  S A+ +F+ M +C+ + PN  TY++++  +S    L +G KIHA ++ N   
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D+ VAT L++MYGKCG   +A  +F ++ +   V WN +I C+  +G   +AL  ++++
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
             EG +    TFVS+L ACS    +++G R  H    E G+   +     +V+++ + G 
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCGS 358

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           L  A      M  R DA  W  L+GA   +G
Sbjct: 359 LEEARKVFNAMKNR-DAVAWSTLIGAYASNG 388



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 201/437 (45%), Gaps = 62/437 (14%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           ++  D   N +  I+    F +   L   +++HA +V +G    +  +T L+N Y   G 
Sbjct: 198 EMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGS 257

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
              +R  FD +  R++ +WN MI  YV+ G   EA++  YQ     G +    TF  +L 
Sbjct: 258 SHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALE-LYQKLDMEGFKRTKATFVSILG 316

Query: 155 AC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL------------------ 193
           AC   + L  G+ +H  +L+ G + +V VA +L++MY + G                   
Sbjct: 317 ACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVA 376

Query: 194 ----------------ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR- 236
                           A  ARK+FD +  RD+  WNAMI+ Y Q+G AV A+ I  EM  
Sbjct: 377 WSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTG 436

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G+  D +T  ++L  CA    +     +H  I +  LE N+ V+N LINMYA+ G + 
Sbjct: 437 AAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE 496

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A R+F    E+ VVSW +++AA+ Q      A   F  M   G++PD +T  S+  +  
Sbjct: 497 EAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVC- 555

Query: 357 QLNDCRNSRSVHGFIMRRGW-FMEDVIIGN----------AVVDMYAKLGIINSACAVFE 405
                      HG  + +GW +  D+   +          A+VD+  + G +  A  + E
Sbjct: 556 ----------THGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLE 605

Query: 406 GLPVK-DVISWNTLITG 421
            +P + D ++W T +T 
Sbjct: 606 SMPFEPDPVAWMTFLTA 622


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 288/766 (37%), Positives = 444/766 (57%), Gaps = 20/766 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H   V  G +  +     LV+ Y   G++   R  FD +  R+V +WNS+++ Y   
Sbjct: 122 EQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGY-SW 180

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
            R ++ V   +      G RPD+YT   V+ A  N   +  G +IH  V+KLGFE +  V
Sbjct: 181 NRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLV 240

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ M  + G+   AR +FD+M  +DS SWN+MI+G+  +G  +EA +  + M+L G 
Sbjct: 241 CNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGA 300

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                T AS++  CA    +    ++H   +K GL  N  V   L+    K   +  A  
Sbjct: 301 KPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFS 360

Query: 301 VFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +F  M   + VVSW ++I+ Y Q+ D   A   F+ M++ G++P+  T     S +  + 
Sbjct: 361 LFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTY----STILTVQ 416

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                  +H  +++   + +   +G A++D + K+G I+ A  VFE +  KDVI+W+ ++
Sbjct: 417 HAVFISEIHAEVIKTN-YEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAML 475

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHARVIK-- 476
            GYAQ G   EA ++F  +     I PN+ T+ SI+ A  +   ++ QG + HA  IK  
Sbjct: 476 AGYAQAGETEEAAKIFHQLTR-EGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLR 534

Query: 477 --NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
             N LC    V++ LV +Y K G I+ A  +F +      V WN++IS +  HGQ  KAL
Sbjct: 535 LNNALC----VSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKAL 590

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +M    +  D ITF+ +++AC+H+GLV +GQ YF++M  +  I P ++HY CM+DL
Sbjct: 591 EVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDL 650

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
           + RAG LG A + I  MP  P A++W  +L A R+H N+ELG +A++++  ++ ++   Y
Sbjct: 651 YSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAY 710

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA  G W     VR L   R +KK PG+S IEV NK   F  G+ +HP  + IY
Sbjct: 711 VLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIY 770

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
            +L  L  +++ +GY PD ++V  D+E+++KE IL+ HSERLAIAFG+I++ P+ P+QI 
Sbjct: 771 SKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIV 830

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVCGDCH++ K +S + +R I+VRDSNRFHHFK G+CSCGDYW
Sbjct: 831 KNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 172/567 (30%), Positives = 277/567 (48%), Gaps = 24/567 (4%)

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
           D  F++  FD    R++   N ++  Y RC +  EA+  F      SGL PD YT   VL
Sbjct: 51  DPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSL-YRSGLSPDSYTMSCVL 109

Query: 154 KACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
             C    N   G+++HC  +K G    + V  SL+ MY + G     R++FD+M  RD  
Sbjct: 110 SVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVV 169

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SWN++++GY  +    +  ++   M++EG   D  TV++++   A    +  G+ IH  +
Sbjct: 170 SWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALV 229

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           VK G E    V N+LI+M +K GM+R A  VFD M  +D VSWNS+IA +  +   + A 
Sbjct: 230 VKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAF 289

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  MQ AG +P   T  S+    A L +    R +H   ++ G      ++   +V +
Sbjct: 290 ETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVAL 349

Query: 391 YAKLGIINSACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
             K   I+ A ++F  +  V+ V+SW  +I+GY QNG   +A+ +F +M     + PN  
Sbjct: 350 -TKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRR-EGVKPNHF 407

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           TY +IL     V       +IHA VIK        V T L+D + K G I DA+ +F  +
Sbjct: 408 TYSTILTVQHAVFI----SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELI 463

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
                + W+A+++ +   G+ ++A   F Q+  EG++P+  TF S++ AC+      E  
Sbjct: 464 ETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQG 523

Query: 570 RYFHMMQEEFGIKPHLKHYGC----MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
           + FH     + IK  L +  C    +V L+ + G++  AH   +    R D   W +++ 
Sbjct: 524 KQFH----AYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKER-DLVSWNSMIS 578

Query: 626 ACRIHGN----MELGAVASDRLFEVDS 648
               HG     +E+      R  EVD+
Sbjct: 579 GYAQHGQAKKALEVFEEMQKRNLEVDA 605



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 139/263 (52%), Gaps = 7/263 (2%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +  +HA ++ +   K+    T L++ +  +G++S +   F+ I  ++V  W++M++ Y +
Sbjct: 421 ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQ 480

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR----NLVDGKKIHCSVLKLGFEWDV 178
            G   EA   F+Q T   G++P+ +TF  ++ AC     ++  GK+ H   +KL     +
Sbjct: 481 AGETEEAAKIFHQLT-REGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNAL 539

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V++SL+ +Y + G    A ++F     RD  SWN+MISGY Q G A +AL++ +EM+  
Sbjct: 540 CVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKR 599

Query: 239 GVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            + +D IT   ++  CA +  +  G    ++ I  H +   +   + +I++Y++ GM+  
Sbjct: 600 NLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGK 659

Query: 298 ALRVFDQM-MERDVVSWNSIIAA 319
           A+ + + M        W  ++AA
Sbjct: 660 AMDIINGMPFPPAATVWRIVLAA 682


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/699 (40%), Positives = 426/699 (60%), Gaps = 8/699 (1%)

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAA 182
           L  A+  F   + ++G  P   TF  +LK C    +L  G+ +H  +   G + +   A 
Sbjct: 40  LPAALAAFVAMS-SAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVS 241
           +L +MY +      AR++FD MPVRD  +WNA+++GY ++G A  A++++  M+ E G  
Sbjct: 99  ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D IT+ S+LP CA +  + +    H + ++ GLE  + V+  +++ Y K G +R A  V
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD M  ++ VSWN++I  Y Q+ D   A   F  M + G+    +++++      +L   
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                VH  ++R G    +V + NA++ MY+K   ++ A  VF+ L  +  +SWN +I G
Sbjct: 279 DEGMRVHELLVRIG-LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            AQNG + +A+ +F  M+  N + P+  T VS++PA + +    Q   IH   I+  L  
Sbjct: 338 CAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV+V T L+DMY KCGR++ A  LF        + WNA+I  +G HG G  A+  F +M 
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             G+ P+  TF+S+L+ACSH+GLV EG+ YF  M+E++G++P ++HYG MVDL GRAG L
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A  FIQ MP+ P  S++GA+LGAC++H N+EL   ++ ++FE+  +   Y+VL++NIY
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           AN   W+ V  VR+     GL+KTPGWS I++ N++  FY+G+  H + ++IY  L  L 
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
            ++K++GYVPD   +  DVE+D K  +L +HSE+LAIAFG+I + P + IQI KNLRVC 
Sbjct: 637 EEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCN 695

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCHN TK IS +T REII+RD  RFHHFKDG CSCGDYW
Sbjct: 696 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 246/468 (52%), Gaps = 9/468 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L + C     L   + +HA L   G      ++T L N YA     + +R  FD + 
Sbjct: 62  FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL---KACRNLVDGK 163
            R+   WN++++ Y R G    A++   +     G RPD  T   VL      R L   +
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACR 181

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           + H   ++ G E  V VA ++L  YC+ G    AR +FD MP ++S SWNAMI GY Q+G
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           ++ EAL + + M  EGV +  ++V + L  C     +  G+ +H  +V+ GL+ N+ V N
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI MY+K   +  A  VFD++  R  VSWN++I    Q+     A   FT MQ   ++P
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D  TLVS+   +A ++D   +R +HG+ +R     +DV +  A++DMYAK G +N A  +
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     + VI+WN +I GY  +G    A+E+F+ M+    I PN+ T++S+L A SH G 
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG-IVPNETTFLSVLSACSHAGL 479

Query: 464 LRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           + +G +    + ++  L   +     +VD+ G+ G++D+A +   ++P
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 297/777 (38%), Positives = 439/777 (56%), Gaps = 9/777 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L QSC +       K LH  ++  G    +F++  L+NFY     L  +   FD + 
Sbjct: 47  YGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMP 106

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK--- 163
            RN  ++ ++I  Y +C R SEA+  F +     G   + + F  VLK   +    K   
Sbjct: 107 DRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ-GEGHELNPFVFSTVLKLLVSAEWAKLGF 165

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  V KLGF+ D FV  +L+  Y   G A  AR++FD +  +D  SW  M++ Y ++ 
Sbjct: 166 SVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENE 225

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              E+L +   MR+ G   +  T AS+L  C   +    G  +H    K      LFV  
Sbjct: 226 CFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGV 285

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI++Y K G +  AL+VF++M + DV+ W+ +IA Y QS     A   F  M++  + P
Sbjct: 286 ELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLP 345

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           +  TL SL    A L D +    +H  +++ G  M +V + NA++DMYAK G + ++  +
Sbjct: 346 NQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDM-NVFVSNALMDMYAKCGRMENSLQL 404

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F   P    +SWNT+I GY Q G   +A+ +F+ M EC ++   + TY S+L A + + A
Sbjct: 405 FSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLEC-QVQGTEVTYSSVLRACAGIAA 463

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G +IH+  +K     +  V   L+DMY KCG I DA  +F  +     V WNA+IS 
Sbjct: 464 LEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISG 523

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           + +HG   +AL  F  ML+   +PD +TFV +L+ACS++GL+  GQ YF  M EE+ I+P
Sbjct: 524 YSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEP 583

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
             +HY CMV L GR+GHL  A   +  +P  P   +W ALL AC IH ++ELG +++ R+
Sbjct: 584 CAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRV 643

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++ E+   +VL+SNIYAN  +W  V  +R+  + +G++K PG S IE   +V  F  G
Sbjct: 644 LEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVG 703

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           + +HP  + I   L  L  K ++ GYVPD S VL DVE+ +KE  L  HSERLA+A+G+I
Sbjct: 704 DTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLI 763

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +P  SP++I KNLR+C DCH   K IS+I +R+II+RD NRFHHF +GICSCGDYW
Sbjct: 764 RTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 2/114 (1%)

Query: 445 NPNQGTYV--SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           +P   TY+  S+L +    G    G  +H  +IK   C D+F    L++ Y K   + DA
Sbjct: 39  SPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDA 98

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
             LF ++P  ++V +  +I  +    +  +A+  F ++  EG   +   F ++L
Sbjct: 99  AKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/699 (40%), Positives = 426/699 (60%), Gaps = 8/699 (1%)

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAA 182
           L  A+  F   + ++G  P   TF  +LK C    +L  G+ +H  +   G + +   A 
Sbjct: 40  LPAALAAFVAMS-SAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVS 241
           +L +MY +      AR++FD MPVRD  +WNA+++GY ++G A  A++++  M+ E G  
Sbjct: 99  ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D IT+ S+LP CA +  + +    H + ++ GLE  + V+  +++ Y K G +R A  V
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD M  ++ VSWN++I  Y Q+ D   A   F  M + G+    +++++      +L   
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                VH  ++R G    +V + NA++ MY+K   ++ A  VF+ L  +  +SWN +I G
Sbjct: 279 DEGMRVHELLVRIG-LDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            AQNG + +A+ +F  M+  N + P+  T VS++PA + +    Q   IH   I+  L  
Sbjct: 338 CAQNGCSEDAVRLFTRMQLEN-VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV+V T L+DMY KCGR++ A  LF        + WNA+I  +G HG G  A+  F +M 
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             G+ P+  TF+S+L+ACSH+GLV EG+ YF  M+E++G++P ++HYG MVDL GRAG L
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A  FIQ MP+ P  S++GA+LGAC++H N+EL   ++ ++FE+  +   Y+VL++NIY
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           AN   W+ V  VR+     GL+KTPGWS I++ N++  FY+G+  H + ++IY  L  L 
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
            ++K++GYVPD   +  DVE+D K  +L +HSE+LAIAFG+I + P + IQI KNLRVC 
Sbjct: 637 EEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCN 695

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCHN TK IS +T REII+RD  RFHHFKDG CSCGDYW
Sbjct: 696 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 246/468 (52%), Gaps = 9/468 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L + C     L   + +HA L   G      ++T L N YA     + +R  FD + 
Sbjct: 62  FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMP 121

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL---KACRNLVDGK 163
            R+   WN++++ Y R G    A++   +     G RPD  T   VL      R L   +
Sbjct: 122 VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACR 181

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           + H   ++ G E  V VA ++L  YC+ G    AR +FD MP ++S SWNAMI GY Q+G
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           ++ EAL + + M  EGV +  ++V + L  C     +  G+ +H  +V+ GL+ N+ V N
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI MY+K   +  A  VFD++  R  VSWN++I    Q+     A   FT MQ   ++P
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D  TLVS+   +A ++D   +R +HG+ +R     +DV +  A++DMYAK G +N A  +
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLH-LDQDVYVLTALIDMYAKCGRVNIARIL 420

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     + VI+WN +I GY  +G    A+E+F+ M+    I PN+ T++S+L A SH G 
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG-IVPNETTFLSVLSACSHAGL 479

Query: 464 LRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           + +G +    + ++  L   +     +VD+ G+ G++D+A +   ++P
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/763 (37%), Positives = 445/763 (58%), Gaps = 13/763 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++LH   +  G +  V   T LV+ Y    +    R  FD +  RNV TW ++IS Y R 
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRNLVDGK--KIHCSVLKLGFEWDVFV 180
               E +  F +     G +P+ +TF   L       V G+  ++H  V+K G +  + V
Sbjct: 173 SMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           + SL+++Y + G    AR LFD   V+   +WN+MISGY  +G  +EAL +   MRL  V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +   + AS++ +CA    +     +H  +VK+G  F+  +   L+  Y+K   M  ALR
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351

Query: 301 VFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +F ++    +VVSW ++I+ + Q++    A   F+ M++ G++P+  T     S++    
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY----SVILTAL 407

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
              +   VH  +++   +     +G A++D Y KLG +  A  VF G+  KD+++W+ ++
Sbjct: 408 PVISPSEVHAQVVKTN-YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHARVIKNC 478
            GYAQ G    AI++F  + +   I PN+ T+ SIL   +   A + QG + H   IK+ 
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGG-IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L   + V++ L+ MY K G I+ A  +F +      V WN++IS +  HGQ  KAL+ F+
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M    V+ D +TF+ +  AC+H+GLV EG++YF +M  +  I P  +H  CMVDL+ RA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A   I+NMP    ++IW  +L ACR+H   ELG +A++++  +  E+   YVL+S
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+YA  G W+   +VR L  +R +KK PG+S IEV NK   F  G+R+HP  ++IY +L 
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
           +L+ ++K LGY PD S+VLQD++++ KE +L  HSERLAIAFG+I++P  SP+ I KNLR
Sbjct: 766 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHF-KDGICSCGDYW 820
           VCGDCH   K I++I EREI+VRDSNRFHHF  DG+CSCGD+W
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 273/554 (49%), Gaps = 25/554 (4%)

Query: 92  LGDLSFSR-----HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF 146
            G +S SR     + FD    R+  ++ S++  + R GR  EA   F       G+  D 
Sbjct: 35  FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL-GMEMDC 93

Query: 147 YTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
             F  VLK    L D   G+++HC  +K GF  DV V  SL+  Y +       RK+FD+
Sbjct: 94  SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M  R+  +W  +ISGY ++    E L +   M+ EG   +  T A+ L V A       G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           L +H  +VK+GL+  + VSN+LIN+Y K G +R A  +FD+   + VV+WNS+I+ Y  +
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
              + A G F +M+   ++    +  S+  + A L + R +  +H  +++ G F+ D  I
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG-FLFDQNI 332

Query: 384 GNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
             A++  Y+K   +  A  +F+ +  V +V+SW  +I+G+ QN    EA+++F  M+   
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-K 391

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + PN+ TY  IL A   +       ++HA+V+K        V T L+D Y K G++++A
Sbjct: 392 GVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F  +     V W+A+++ +   G+ + A+  F ++   G++P+  TF S+L  C+ +
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGC----MVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
                  + FH     F IK  L    C    ++ ++ + G++  A    +    + D  
Sbjct: 508 NASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLV 562

Query: 619 IWGALLGACRIHGN 632
            W +++     HG 
Sbjct: 563 SWNSMISGYAQHGQ 576


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/806 (36%), Positives = 465/806 (57%), Gaps = 41/806 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHI-SYRN 109
            ++C  +  +K  H  L   G    V + TKLV     LG    LSF++  F++  SY  
Sbjct: 39  LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
            + +NS+I  Y   G  +EA+  F +  + SG+ PD YTFP  L AC   R   +G +IH
Sbjct: 99  CFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             ++K+G+  D+FV  SL+H Y   G  + ARK+FD+M  R+  SW +MI GY +   A 
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 227 EALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           +A+D+   M R E V+ + +T+  ++  CA+ +++ +G  ++ +I   G+E N  + + L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K   +  A R+FD+    ++   N++ + Y +      A G F  M  +G++PD 
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL----------- 394
           ++++S  S  +QL +    +S HG+++R G+   D I  NA++DMY K            
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFD 396

Query: 395 --------------------GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                               G +++A   FE +P K+++SWNT+I+G  Q  L  EAIEV
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F  M+    +N +  T +SI  A  H+GAL     I+  + KN +  DV + T LVDM+ 
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           +CG  + AMS+F  +       W A I    + G  ++A+  F  M+++G++PD + FV 
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
            LTACSH GLV +G+  F+ M +  G+ P   HYGCMVDL GRAG L  A   I++MP+ 
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P+  IW +LL ACR+ GN+E+ A A++++  +  E  G YVL+SN+YA+ G+W  + +VR
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
              +++GL+K PG SSI++  K   F +G+ +HP+   I   L  ++ +   LG+VPD S
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
            VL DV+E EK  +L+ HSE+LA+A+G+ISS   + I+I KNLRVC DCH++ KF S++ 
Sbjct: 757 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 816

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
            REII+RD+NRFH+ + G CSCGD+W
Sbjct: 817 NREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 246/508 (48%), Gaps = 41/508 (8%)

Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDMPV 206
           P  LK C+ + + K  H S+ K G + DV     L+   C  G     + A+++F++   
Sbjct: 36  PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95

Query: 207 RDSG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
             +   +N++I GY  SG   EA+ +   M   G+S D  T    L  CA+S    +G+ 
Sbjct: 96  YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  IVK G   +LFV N+L++ YA+ G +  A +VFD+M ER+VVSW S+I  Y + + 
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215

Query: 326 PITAHG-FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
              A   FF  ++   + P+ +T+V + S  A+L D      V+ FI   G  + D+++ 
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV- 274

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           +A+VDMY K   I+ A  +F+     ++   N + + Y + GL  EA+ VF +M +   +
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-V 333

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P++ + +S + + S +  +  G   H  V++N       +   L+DMY KC R D A  
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD---------------------- 542
           +F ++   + V WN+I++ +  +G+ D A   F  M +                      
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453

Query: 543 ----------EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
                     EGV  D +T +S+ +AC H G +   +  ++ + E+ GI+  ++    +V
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLV 512

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           D+F R G    A +   ++  R D S W
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNR-DVSAW 539



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 205/454 (45%), Gaps = 52/454 (11%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C KL  ++   +++A +  SG        + LV+ Y     +  ++  FD     N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +   N+M S YVR G   EA+  F    + SG+RPD  +    + +C   RN++ GK  H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360

Query: 167 CSVLKLGFE-WD------------------------------VFVAASLLHMYCRFGLAN 195
             VL+ GFE WD                              V    S++  Y   G  +
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVC 254
            A + F+ MP ++  SWN +ISG  Q     EA+++   M+  EGV+ D +T+ SI   C
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
                +     I+ YI K+G++ ++ +   L++M+++ G    A+ +F+ +  RDV +W 
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFIMR 373
           + I A   + +   A   F  M + G++PD +  V   +  +     +  + + +  +  
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITGYAQNG---LA 428
            G   EDV  G  +VD+  + G++  A  + E +P++  DVI WN+L+      G   +A
Sbjct: 601 HGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA 658

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           + A E  Q++          G+YV +   Y+  G
Sbjct: 659 AYAAEKIQVLAP-----ERTGSYVLLSNVYASAG 687


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 282/742 (38%), Positives = 430/742 (57%), Gaps = 15/742 (2%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y   G ++ +   F  I + N  +W  +++ + R G   EA+  +Y+  +  GLRPD  
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALG-YYRRMVLEGLRPDGA 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDD 203
            F   +  C   ++L  G+ +H  +L+    E+D+ +  +L+ MY R     +ARK FD+
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEM---RLEGVSMDPITVASILPVCARSDNI 260
           M  +   +WNA+I+GY ++G+   AL I  +M     EG+  D IT +S L  C    +I
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  I    V  G   +  V N LINMY+K G +  A +VFD++  RDV++WN++I+ Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            +      A   F  M     +P+++T + L +    L D    R++H  +   G +  D
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG-YESD 298

Query: 381 VIIGNAVVDMYAKLGI-INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           ++IGN +++MY K    +  A  VFE +  +DVI+WN LI  Y Q G A +A+++F+ M+
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             N + PN+ T  ++L A + +GA RQG  +HA +       DV +   L++MY +CG +
Sbjct: 359 LEN-VAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           DD + +F  +   S V W+ +I+ +  HG     L  F ++L EG+  D +T VS L+AC
Sbjct: 418 DDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSAC 477

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH G++ EG + F  M  + G+ P  +H+ CMVDL  RAG L  A N I +MP  PDA  
Sbjct: 478 SHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA 537

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV-LMSNIYANVGKWEGVDEVRSLAR 678
           W +LL  C++H + +  A  +D+LFE++SE+    V L+SN+YA  G+W   D+VR    
Sbjct: 538 WTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRN 594

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            R  +K PG S IE+N+ V  F  G+++HP+ E I  E++ L+ +MK  GYVPD   VL 
Sbjct: 595 RRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLH 654

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           +V+E+EKE +L  HSE+LAIA+G+IS+PP +P+ I KNLR C DCH   KFIS+I  R+I
Sbjct: 655 NVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKI 714

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           +VRDS RFHHF++G CSC DYW
Sbjct: 715 VVRDSTRFHHFENGSCSCKDYW 736



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 264/518 (50%), Gaps = 13/518 (2%)

Query: 56  SCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           S   L   + LHA+++ +  ++  +   T L+  YA   DL  +R TFD +  + + TWN
Sbjct: 70  SSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTS--GLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           ++I+ Y R G    A+  +      S  G++PD  TF   L AC    ++  G++I    
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEART 189

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  G+  D  V  +L++MY + G    ARK+FD +  RD  +WN MISGY + G A +AL
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           ++   M       + +T   +L  C   +++  G  IH  + + G E +L + N L+NMY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMY 309

Query: 290 AK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
            K    +  A +VF++M  RDV++WN +I AY Q      A   F  MQ   + P+ +TL
Sbjct: 310 TKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            ++ S  A L   R  ++VH  I   G    DV++ N++++MY + G ++    VF  + 
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIA-SGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIR 428

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            K ++SW+TLI  YAQ+G +   +E F ++++E   +  +  T VS L A SH G L++G
Sbjct: 429 DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQE--GLAADDVTMVSTLSACSHGGMLKEG 486

Query: 468 IKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
           ++    ++ +  L  D     C+VD+  + GR++ A +L + +P    +V W +++S   
Sbjct: 487 VQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCK 546

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           +H    +A     ++ +     +H T   L    + +G
Sbjct: 547 LHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAG 584



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 210/419 (50%), Gaps = 35/419 (8%)

Query: 23  HRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTV 79
           HR       + +  SP+ ++ ++  I F     +CT +  +   + + A  V SG     
Sbjct: 141 HRGALKIYQDMVSKSPEGMKPDA--ITFSSALYACTVVGDISQGREIEARTVASGYASDS 198

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
                L+N Y+  G L  +R  FD +  R+V  WN+MIS Y + G  ++A++ F Q    
Sbjct: 199 IVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF-QRMGP 257

Query: 140 SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMY--CRFGLA 194
           +  +P+  TF  +L AC NL D   G+ IH  V + G+E D+ +   LL+MY  C   L 
Sbjct: 258 NDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLE 317

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR++F+ M  RD  +WN +I  Y Q G A +ALDI  +M+LE V+ + IT++++L  C
Sbjct: 318 E-ARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSAC 376

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           A       G  +H  I     + ++ + N+L+NMY + G +   + VF  + ++ +VSW+
Sbjct: 377 AVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWS 436

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++IAAY Q     T    F  + Q G+  D +T+VS  S  +           HG +++ 
Sbjct: 437 TLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS-----------HGGMLKE 485

Query: 375 GWFMEDVIIGN-----------AVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITG 421
           G      ++G+            +VD+ ++ G + +A  +   +P + D ++W +L++G
Sbjct: 486 GVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 288/780 (36%), Positives = 466/780 (59%), Gaps = 13/780 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C KL  ++    LH+LLV  G   T F    LV+ YA   DLS +R  FD   
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 107 YR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
            + +   WNS++S Y   G+  E ++ F +  +T G  P+ YT    L AC        G
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLG 303

Query: 163 KKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           K+IH SVLK      +++V  +L+ MY R G    A ++   M   D  +WN++I GY Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    EAL+   +M   G   D +++ SI+    R  N+L+G+ +H Y++KHG + NL V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N LI+MY+K  +  +  R F +M ++D++SW ++IA Y Q++  + A   F  + +  +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + D + L S+    + L      + +H  I+R+G    D +I N +VD+Y K   +  A 
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYAT 541

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VFE +  KDV+SW ++I+  A NG  SEA+E+F+ M E   ++ +    + IL A + +
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASL 600

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL +G +IH  +++   C +  +A  +VDMY  CG +  A ++F ++ R   + + ++I
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +G+HG G  A+  F +M  E V PDHI+F++LL ACSH+GL+ EG+ +  +M+ E+ +
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P  +HY C+VD+ GRA  +  A  F++ M   P A +W ALL ACR H   E+G +A+ 
Sbjct: 721 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQ 780

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           RL E++ +N G  VL+SN++A  G+W  V++VR+  +  G++K PG S IE++ KV  F 
Sbjct: 781 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFT 840

Query: 702 TGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             +++HP+ ++IY++L  +T K+ + +GYV D  FVL +V+E EK  +L  HSER+AIA+
Sbjct: 841 ARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAY 900

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G++ +P ++ ++I KNLRVC DCH + K +S++  R+I++RD+NRFHHF+ G+CSCGD W
Sbjct: 901 GLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 183/668 (27%), Positives = 327/668 (48%), Gaps = 29/668 (4%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPL---------FSAAANSLQISPDCLENESREIDFDDL 53
           RL  S      C+  P  Q+++P+         F           D  EN S    F  +
Sbjct: 27  RLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYV 86

Query: 54  FQSCTKLHHV---KRLHALLVVS-GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
            + C K   V   ++LH+ +  +    +  F + KLV  Y   G L  +   FD +  R 
Sbjct: 87  LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
            + WN+MI  YV  G  + A+  ++   +  G+     +FP +LKAC  L D   G ++H
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELH 205

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNA 225
             ++KLG+    F+  +L+ MY +    + AR+LFD    + D+  WN+++S Y  SG +
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNN 284
           +E L++  EM + G + +  T+ S L  C        G  IH  ++K     + L+V N 
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI MY + G M  A R+  QM   DVV+WNS+I  Y Q+     A  FF+ M  AG + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +++ S+ +   +L++      +H ++++ GW   ++ +GN ++DMY+K  +       F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +  KD+ISW T+I GYAQN    EA+E+F+ + +   +  ++    SIL A S + ++
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSM 503

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
               +IH  +++  L  D  +   LVD+YGKC  +  A  +F  +     V W ++IS  
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKP 583
            ++G   +A+  FR+M++ G+  D +  + +L+A +    +++G+  + +++++ F ++ 
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            +     +VD++   G L  A      +  R     + +++ A  +HG    G  A +  
Sbjct: 623 SIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELF 676

Query: 644 FEVDSENV 651
            ++  ENV
Sbjct: 677 DKMRHENV 684


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/812 (36%), Positives = 453/812 (55%), Gaps = 44/812 (5%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD---LSFSRHTF---- 102
            ++  + C  L+ +K+LH  +  +G  +   + TKLVN  A +     L ++R  F    
Sbjct: 28  LNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFK 87

Query: 103 -DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV- 160
            D  S   ++  NS+I  Y   G   EA+   Y   L  G+ P+ YTFP VL  C  +  
Sbjct: 88  EDVRSDDALFMLNSLIRGYSSAGLGREAI-LLYVRMLVLGVTPNHYTFPFVLSGCTKIAA 146

Query: 161 --DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
             +G ++H SV+K+G E DVF+   L+H Y   G  +   K+F+ M  R+  SW ++I G
Sbjct: 147 FCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICG 206

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y +     EA+ +  EM   G+    +T+  ++  CA+  ++  G  +  YI + GL+ N
Sbjct: 207 YARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLN 266

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
             + N L++MY K G +  A R+FD+ ++R++V +N+I++ Y +      A      M Q
Sbjct: 267 KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ 326

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G +PD +T++S  S  AQL D    +  HG+++R G    D I GN ++DMY K G   
Sbjct: 327 QGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSI-GNVIIDMYMKCGKPE 385

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE--------------- 443
            AC VF+ +  K V+SWN+L  G+ +NG    A EVF  + E N                
Sbjct: 386 MACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSL 445

Query: 444 ---------------INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
                          I  ++ T + I  A  ++GA      +H  + KN +  D+ + T 
Sbjct: 446 FEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTA 505

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LVDM+ +CG    AM +F ++       W A I    + G G+ A   F QML +GV+PD
Sbjct: 506 LVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPD 565

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            + FV +LTACSH G V +G   F +M E+ GI P ++HYGCMVDL GRAG L  A + I
Sbjct: 566 VVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLI 624

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           ++MP+ P+  +WG+LL ACR+H N+E+   A++R+ E+  +  G +VL+SNIYA+ GKW 
Sbjct: 625 KSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWT 684

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V  VR   R++G++K PG SS++VN  +  F +G+ +HP+   I   L+ +  +    G
Sbjct: 685 DVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAG 744

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           ++PD S VL DV+E EKE++L+ HSE+LAIAFG+I++    PI++ KNLR+C DCH++ K
Sbjct: 745 HIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAK 804

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             S I  REIIVRD+NRFH F+ G+CSC DYW
Sbjct: 805 MASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 156/328 (47%), Gaps = 11/328 (3%)

Query: 243 DPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFG------MM 295
           DP+T  S L    R    L+ L  +H  I K+GL+        L+N  A+          
Sbjct: 20  DPMTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYA 79

Query: 296 RHALRVFDQMMERD--VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
           R A  +F + +  D  +   NS+I  Y  +     A   +  M   G+ P+  T   + S
Sbjct: 80  RKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLS 139

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
              ++        VHG +++ G   EDV I N ++  YA+ G ++    VFEG+  ++V+
Sbjct: 140 GCTKIAAFCEGIQVHGSVVKMG-LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVV 198

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW +LI GYA+     EA+ +F  M E   I P+  T V ++ A + +  L  G ++ A 
Sbjct: 199 SWTSLICGYARGDRPKEAVSLFFEMVEAG-IRPSSVTMVCVISACAKLRDLDMGERVCAY 257

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           + +  L  +  +   LVDMY KCG ID A  LF +    + V +N I+S +   G   +A
Sbjct: 258 IGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREA 317

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSH 561
           L    +ML +G RPD +T +S ++A + 
Sbjct: 318 LAILDEMLQQGPRPDRVTMLSAISASAQ 345


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/803 (37%), Positives = 440/803 (54%), Gaps = 41/803 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR--NVYTW 113
           SC  +   + LH  +  S   +       L++ Y     L  +R  F+ + +R  NV +W
Sbjct: 19  SCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSW 78

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           N+MI+ Y + G  +EA+  +++  L  GL  D  TF  VL AC +L  G++IH  V   G
Sbjct: 79  NAMIAAYAQNGHSTEALVLYWRMNL-QGLGTDHVTFVSVLGACSSLAQGREIHNRVFYSG 137

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            +    +A +L+ MY RFG    A+++F  +  RD  SWNA+I  + QSG+   AL I  
Sbjct: 138 LDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFK 197

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           EM+ + V  +  T  +++   +  + +  G  IH  IV +G + +L V+  LINMY K G
Sbjct: 198 EMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCG 256

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
               A  VFD+M +RD+VSWN +I  Y  + D   A   +  +   G +    T VS+  
Sbjct: 257 SSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILG 316

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG------- 406
             + +      R VH  I+ RG    +V +  A+V+MYAK G +  A  VF         
Sbjct: 317 ACSSVKALAQGRLVHSHILERG-LDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAV 375

Query: 407 ---------------------------LPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
                                      L  +D ISWN +IT Y QNG A  A+++F+ M 
Sbjct: 376 AWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMT 435

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
               + P+  T++++L A + +G L +   +HA++ ++ L  +V V   L++MY +CG +
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSL 495

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           ++A  LF      + V W A+++    +G+  +AL+ F++M  EGV+PD +T+ S+L  C
Sbjct: 496 EEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVC 555

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           +H G + +G RYF  M E   + P   H+  MVDL GR+G L  A   +++MP  PD   
Sbjct: 556 THGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVA 615

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W   L ACRIHG +ELG  A++R++E+D  +   Y+ MSNIYA  G WE V  VR    +
Sbjct: 616 WMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEE 675

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGLKK PG S IEV+ K+  F +G + HP+ ++I +EL  L   M++ GYVPD   VL D
Sbjct: 676 RGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHD 735

Query: 740 VEEDEKEHILTSHSERLAIAFGIISS-PPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           V E EKE +L  HSE++AIAFG++SS     PI++ KNLRVC DCH  TKFI++I  R+I
Sbjct: 736 VSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDI 795

Query: 799 IVRDSNRFHHF-KDGICSCGDYW 820
           IVRD NRFH F  DG CSCGDYW
Sbjct: 796 IVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 257/524 (49%), Gaps = 48/524 (9%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY 107
           + F  +  +C+ L   + +H  +  SG       +  LV  YA  G +  ++  F  +  
Sbjct: 111 VTFVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQT 170

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKK 164
           R+  +WN++I  + + G  S A+  F +  +   ++P+  T+  V+        L +G+K
Sbjct: 171 RDETSWNAVILAHSQSGDWSGALRIFKE--MKCDVKPNSTTYINVISGFSTPEVLPEGRK 228

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  ++  GF+ D+ VA +L++MY + G ++ AR++FD M  RD  SWN MI  Y  +G+
Sbjct: 229 IHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGD 288

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EAL++  ++ +EG      T  SIL  C+    +  G L+H +I++ GL+  + V+  
Sbjct: 289 FHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATA 348

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ------------------SNDP 326
           L+NMYAK G +  A +VF+ M  RD V+W+++I AY                    S D 
Sbjct: 349 LVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDT 408

Query: 327 ITAHGFFTTMQQ-----------------AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           I+ +   TT  Q                 AG++PD +T +++    A L      +++H 
Sbjct: 409 ISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHA 468

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            I        +V++ N +++MYA+ G +  A  +F     K V+SW  ++  ++Q G  +
Sbjct: 469 QI-SESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYA 527

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH---ARVIKNCLCFDVFVA 486
           EA+++FQ M +   + P+  TY SIL   +H G+L QG +     A +       D F A
Sbjct: 528 EALDLFQEM-DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAA 586

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
             +VD+ G+ GR+ DA  L   +P     V W   ++   IHG+
Sbjct: 587 --MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGK 628



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 205/393 (52%), Gaps = 14/393 (3%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D +T  ++L  C+   +++ G  +H  I     E +  V N LI+MY K   +  A  VF
Sbjct: 6   DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 303 DQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           + M   +R+VVSWN++IAAY Q+     A   +  M   G+  D +T VS+    + L  
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124

Query: 361 CRNSRSVHGFIMRRGW--FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
               R +H  +   G   F     + NA+V MYA+ G +  A  +F+ L  +D  SWN +
Sbjct: 125 --QGREIHNRVFYSGLDSFQS---LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I  ++Q+G  S A+ +F+ M+ C+ + PN  TY++++  +S    L +G KIHA ++ N 
Sbjct: 180 ILAHSQSGDWSGALRIFKEMK-CD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG 237

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              D+ VAT L++MYGKCG   +A  +F ++ +   V WN +I C+ ++G   +AL  ++
Sbjct: 238 FDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQ 297

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           ++  EG +    TFVS+L ACS    +++G R  H    E G+   +     +V+++ + 
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKC 356

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           G L  A      M  R DA  W  L+GA   +G
Sbjct: 357 GSLEEARKVFNAMKNR-DAVAWSTLIGAYASNG 388



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 201/437 (45%), Gaps = 62/437 (14%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           ++  D   N +  I+    F +   L   +++HA +V +G    +  +T L+N Y   G 
Sbjct: 198 EMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGS 257

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
              +R  FD +  R++ +WN MI  YV  G   EA++  YQ     G +    TF  +L 
Sbjct: 258 SHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALE-LYQKLDMEGFKRTKATFVSILG 316

Query: 155 AC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL------------------ 193
           AC   + L  G+ +H  +L+ G + +V VA +L++MY + G                   
Sbjct: 317 ACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVA 376

Query: 194 ----------------ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR- 236
                           A  ARK+FD +  RD+ SWNAMI+ Y Q+G AV A+ I  EM  
Sbjct: 377 WSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTG 436

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G+  D +T  ++L  CA    +     +H  I +  LE N+ V+N LINMYA+ G + 
Sbjct: 437 AAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLE 496

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A R+F    E+ VVSW +++AA+ Q      A   F  M   G++PD +T  S+  +  
Sbjct: 497 EAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVC- 555

Query: 357 QLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAV----------VDMYAKLGIINSACAVFE 405
                      HG  + +GW +  D+   +A+          VD+  + G +  A  + E
Sbjct: 556 ----------THGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLE 605

Query: 406 GLPVK-DVISWNTLITG 421
            +P + D ++W T +T 
Sbjct: 606 SMPFEPDPVAWMTFLTA 622


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/682 (39%), Positives = 416/682 (60%), Gaps = 1/682 (0%)

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           T  L P       +L+  ++L   ++IH  ++  G   + F++ SL++ Y   GL   A+
Sbjct: 17  TQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK 76

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++F   P ++  SW  +ISG  ++   VEA+D+  EM +     + +T++S+LP  A   
Sbjct: 77  QIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLG 136

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            I     +H + V+ G E N+FV   L++MY+KFG M  A ++F+ M ER+VV+WN+I++
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVS 196

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y        A   F  M++ G+  D  T++SL      +   +    +HGFI+R G + 
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG-YE 255

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D  I  A++D+Y     ++ A  VF  + VKDV +W  ++TG++       AI+ F  M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                +  +    + IL + SH GAL+QG ++HA  IK C   ++FV + ++DMY  CG 
Sbjct: 316 LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGN 375

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++DA   FY +     V WNA+I+ +G++G G  A++ F QM   G+ PD  TFVS+L A
Sbjct: 376 LEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSH+G+V EG + F+ M +   + P+L+HY C++D+ GRAG L  A++FI NMP +PD  
Sbjct: 436 CSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFD 495

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           ++  LLGACRIHGN++LG   S ++FE++  + GYYVL+SN+YA  G WEGV   R+  R
Sbjct: 496 VYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLR 555

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            + +KK PG+SSIE+N ++  F  G + HP+Y KI   L+ L  K+K  GYVP+ + +LQ
Sbjct: 556 SKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQ 615

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           DV +D K+ IL  HSE++AIAFG++ + P++ I+I KNLR C DCH  +KF+S++  R +
Sbjct: 616 DVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVL 675

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           +++D+NRFH F+DG+CSC DYW
Sbjct: 676 VIKDANRFHVFQDGVCSCRDYW 697



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 245/465 (52%), Gaps = 12/465 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           + +    L  ++++HA ++ SG     F S  L+N Y   G L+ ++  F H  Y+NV +
Sbjct: 30  ILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVS 89

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSV 169
           W  +IS   +     EA+D F +  +    +P+  T   VL A  NL      K +HC  
Sbjct: 90  WTILISGLAKNDCFVEAIDVFREMIM-GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++ GFE +VFV  +L+ MY +FG   VAR+LF+ M  R+  +WNA++SGY   G + EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAI 208

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+ + MR +G+ +D  T+ S++P       +  G  IH +I++ G E +  +   L+++Y
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY 268

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP---DLL 346
                +  A RVF +M  +DV +W  ++  +        A   F  M   GIQ    D +
Sbjct: 269 VSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM--LGIQNLKLDSI 326

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
            L+ + S  +     +  R VH   ++   F  ++ +G+AV+DMYA  G +  A   F G
Sbjct: 327 ALMGILSSCSHSGALQQGRRVHALAIKT-CFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  KDV+ WN +I G   NG  ++AI++F  M+    ++P++ T+VS+L A SH G + +
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSG-LDPDESTFVSVLYACSHAGMVYE 444

Query: 467 GIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           G++I   ++K   +  ++    C++D+ G+ G++D A S    +P
Sbjct: 445 GLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMP 489



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 195/412 (47%), Gaps = 9/412 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V  G    VF  T LV+ Y+  G +  +R  F+ +S RNV TWN+++S Y   
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDH 201

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   EA+D F       GL  DFYT   ++ A  +   L  G  IH  +++ G+E D  +
Sbjct: 202 GFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEG 239
             +L+ +Y      + A ++F +M V+D  +W  M++G+    +   A+   ++M  ++ 
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           + +D I +  IL  C+ S  +  G  +H   +K     N+FV + +I+MYA  G +  A 
Sbjct: 321 LKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           R F  M E+DVV WN++IA    +     A   F  M+ +G+ PD  T VS+    +   
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
                  +   +++    + ++     V+D+  + G +++A +    +P + D   ++TL
Sbjct: 441 MVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTL 500

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +     +G      E+ Q   +  E+ PN   Y  +L     +    +G+K+
Sbjct: 501 LGACRIHGNIKLGHEISQ---KIFEMEPNDAGYYVLLSNMYALAGNWEGVKM 549


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 292/782 (37%), Positives = 468/782 (59%), Gaps = 18/782 (2%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SY 107
           L +SC +  +    K +H  L+ SG ++ +V  +T L++ Y+  GD   +R  F+ + + 
Sbjct: 32  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTETARLIFEGMGNK 90

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKK 164
           R++ +W++M+S +       +A+  F    L  G  P+ Y F  V++AC N      G+ 
Sbjct: 91  RDLVSWSAMVSCFANNSMEWQAIWTFLDM-LELGFYPNEYCFAAVIRACSNANYAWVGEI 149

Query: 165 IHCSVLKLGF-EWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           I+  V+K G+ E DV V   L+ M+ +  G    A K+FD MP R+  +W  MI+ + Q 
Sbjct: 150 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 209

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G A +A+D+  +M L G   D  T +S+L  C     +  G  +H  +++ GL  ++ V 
Sbjct: 210 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 269

Query: 283 NNLINMYAKF---GMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-PITAHGFFTTMQQ 338
            +L++MYAK    G +  + +VF+QM E +V+SW +II AY QS +    A   F  M  
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             I+P+  +  S+      L+D      V+ + ++ G    + + GN+++ MYA+ G + 
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV-GNSLISMYARSGRME 388

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A   F+ L  K+++S+N ++ GYA+N  + EA  +F  + +   I  +  T+ S+L   
Sbjct: 389 DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGA 447

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +GA+ +G +IH R++K     +  +   L+ MY +CG I+ A  +F ++   + + W 
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 507

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           ++I+    HG   +AL  F +ML+ G +P+ IT+V++L+ACSH G++SEGQ++F+ M +E
Sbjct: 508 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 567

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
            GI P ++HY CMVDL GR+G L  A  FI +MP+  DA +W  LLGACR+HGN ELG  
Sbjct: 568 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 627

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A++ + E + ++   Y+L+SN++A+ G+W+ V ++R   ++R L K  G S IEV N+V 
Sbjct: 628 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 687

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F+ G  +HP+  +IY EL  L +K+K +GY+PD  FVL D+EE++KE  L  HSE++A+
Sbjct: 688 RFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAV 747

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+IS+    PI+IFKNLRVCGDCH   K+IS  T REI+VRDSNRFHH K+G+CSC D
Sbjct: 748 AFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 807

Query: 819 YW 820
           YW
Sbjct: 808 YW 809



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 207/384 (53%), Gaps = 16/384 (4%)

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A   LD M  +    D  T + +L  C R  N   G L+H  +++ GLE +  V N LI+
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 288 MYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +Y+K G    A  +F+ M  +RD+VSW+++++ +  ++    A   F  M + G  P+  
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK-LGIINSACAVFE 405
              ++    +  N       ++GF+++ G+   DV +G  ++DM+ K  G + SA  VF+
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P +++++W  +IT +AQ G A +AI++F  ME    + P++ TY S+L A + +G L 
Sbjct: 190 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLA 248

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLFYQVPRSSSVPWNAIIS 522
            G ++H+RVI+  L  DV V   LVDMY KC   G +DD+  +F Q+P  + + W AII+
Sbjct: 249 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 308

Query: 523 CHGIHGQGDK-ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
            +   G+ DK A+  F +M+   +RP+H +F S+L AC +      G++ +      + +
Sbjct: 309 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAV 363

Query: 582 KPHLKHYGC----MVDLFGRAGHL 601
           K  +    C    ++ ++ R+G +
Sbjct: 364 KLGIASVNCVGNSLISMYARSGRM 387


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 292/782 (37%), Positives = 468/782 (59%), Gaps = 18/782 (2%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SY 107
           L +SC +  +    K +H  L+ SG ++ +V  +T L++ Y+  GD   +R  F+ + + 
Sbjct: 50  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTETARLIFEGMGNK 108

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKK 164
           R++ +W++M+S +       +A+  F    L  G  P+ Y F  V++AC N      G+ 
Sbjct: 109 RDLVSWSAMVSCFANNSMEWQAIWTFLDM-LELGFYPNEYCFAAVIRACSNANYAWVGEI 167

Query: 165 IHCSVLKLGF-EWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           I+  V+K G+ E DV V   L+ M+ +  G    A K+FD MP R+  +W  MI+ + Q 
Sbjct: 168 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 227

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G A +A+D+  +M L G   D  T +S+L  C     +  G  +H  +++ GL  ++ V 
Sbjct: 228 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 287

Query: 283 NNLINMYAKF---GMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-PITAHGFFTTMQQ 338
            +L++MYAK    G +  + +VF+QM E +V+SW +II AY QS +    A   F  M  
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             I+P+  +  S+      L+D      V+ + ++ G    + + GN+++ MYA+ G + 
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV-GNSLISMYARSGRME 406

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A   F+ L  K+++S+N ++ GYA+N  + EA  +F  + +   I  +  T+ S+L   
Sbjct: 407 DARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGA 465

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +GA+ +G +IH R++K     +  +   L+ MY +CG I+ A  +F ++   + + W 
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWT 525

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           ++I+    HG   +AL  F +ML+ G +P+ IT+V++L+ACSH G++SEGQ++F+ M +E
Sbjct: 526 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 585

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
            GI P ++HY CMVDL GR+G L  A  FI +MP+  DA +W  LLGACR+HGN ELG  
Sbjct: 586 HGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRH 645

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A++ + E + ++   Y+L+SN++A+ G+W+ V ++R   ++R L K  G S IEV N+V 
Sbjct: 646 AAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVH 705

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F+ G  +HP+  +IY EL  L +K+K +GY+PD  FVL D+EE++KE  L  HSE++A+
Sbjct: 706 RFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAV 765

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+IS+    PI+IFKNLRVCGDCH   K+IS  T REI+VRDSNRFHH K+G+CSC D
Sbjct: 766 AFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCND 825

Query: 819 YW 820
           YW
Sbjct: 826 YW 827



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 207/384 (53%), Gaps = 16/384 (4%)

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A   LD M  +    D  T + +L  C R  N   G L+H  +++ GLE +  V N LI+
Sbjct: 28  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87

Query: 288 MYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +Y+K G    A  +F+ M  +RD+VSW+++++ +  ++    A   F  M + G  P+  
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK-LGIINSACAVFE 405
              ++    +  N       ++GF+++ G+   DV +G  ++DM+ K  G + SA  VF+
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P +++++W  +IT +AQ G A +AI++F  ME    + P++ TY S+L A + +G L 
Sbjct: 208 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLA 266

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLFYQVPRSSSVPWNAIIS 522
            G ++H+RVI+  L  DV V   LVDMY KC   G +DD+  +F Q+P  + + W AII+
Sbjct: 267 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 326

Query: 523 CHGIHGQGDK-ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
            +   G+ DK A+  F +M+   +RP+H +F S+L AC +      G++ +      + +
Sbjct: 327 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY-----SYAV 381

Query: 582 KPHLKHYGC----MVDLFGRAGHL 601
           K  +    C    ++ ++ R+G +
Sbjct: 382 KLGIASVNCVGNSLISMYARSGRM 405


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/753 (37%), Positives = 428/753 (56%), Gaps = 13/753 (1%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S+  +++ +   GD+S +R  FD +  R V TW  ++  Y R     EA   F Q 
Sbjct: 77  KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136

Query: 137 TLTSGLR-PDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAAS--LLHMYCR 190
             +S    PD  TF  +L  C + V      ++H   +KLGF+ + F+  S  LL  YC 
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
               ++A  LF+++P +DS ++N +I+GY + G   E++ +  +MR  G      T + +
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L       +   G  +H   V  G   +  V N +++ Y+K   +     +FD+M E D 
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VS+N +I++Y Q++    +  FF  MQ  G         ++ SI A L+  +  R +H  
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376

Query: 371 IMRRGWFMEDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            +       D I  +GN++VDMYAK  +   A  +F+ LP +  +SW  LI+GY Q GL 
Sbjct: 377 AL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
              +++F  M   N +  +Q T+ ++L A +   +L  G ++HA +I++    +VF  + 
Sbjct: 434 GAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LVDMY KCG I DA+ +F ++P  ++V WNA+IS H  +G G+ A+  F +M++ G++PD
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            ++ + +LTACSH G V +G  YF  M   +GI P  KHY CM+DL GR G    A   +
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKW 667
             MP  PD  +W ++L ACRIH N  L   A+++LF ++   +   YV MSNIYA  G+W
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW 672

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           E V +V+   R+RG+KK P +S +EVN+K+ +F + ++THP  ++I  ++  LTA+++  
Sbjct: 673 EKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GY PD S V+QDV+E  K   L  HSERLA+AF +IS+P   PI + KNLR C DCH   
Sbjct: 733 GYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAI 792

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K IS+I +REI VRD++RFHHF +G+CSCGDYW
Sbjct: 793 KLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 246/526 (46%), Gaps = 45/526 (8%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             +D +++   ++K GF+ D   +  ++    R G  + ARK++D+MP +++ S N MIS
Sbjct: 28  TFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMIS 87

Query: 218 GYCQSGNAVEALDILDEMRLEGVSM---------------------------------DP 244
           G+ ++G+   A D+ D M    V                                   D 
Sbjct: 88  GHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH 147

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF--VSNNLINMYAKFGMMRHALRVF 302
           +T  ++LP C  +    +   +H + VK G + N F  VSN L+  Y +   +  A  +F
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           +++ E+D V++N++I  YE+      +   F  M+Q+G QP   T   +   V  L+D  
Sbjct: 208 EEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             + +H   +  G F  D  +GN ++D Y+K   +     +F+ +P  D +S+N +I+ Y
Sbjct: 268 LGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           +Q      ++  F+ M +C   +     + ++L   +++ +L+ G ++H + +       
Sbjct: 327 SQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH---GIHGQGDKALNFFRQ 539
           + V   LVDMY KC   ++A  +F  +P+ ++V W A+IS +   G+HG G   L  F +
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTK 442

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M    +R D  TF ++L A +    +  G++    +     ++      G +VD++ + G
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCG 501

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
            +  A    + MP R +A  W AL+ A   +G+ E    A  ++ E
Sbjct: 502 SIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIE 546



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 29/437 (6%)

Query: 43  NESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR 99
           ++  +  F  + ++   LH     ++LHAL V +G  +      ++++FY+    +  +R
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
             FD +   +  ++N +IS Y +  +   ++  F +       R +F  F  +L    NL
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF-PFATMLSIAANL 364

Query: 160 VD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
                G+++HC  L    +  + V  SL+ MY +  +   A  +F  +P R + SW A+I
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           SGY Q G     L +  +MR   +  D  T A++L   A   ++L G  +H +I++ G  
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N+F  + L++MYAK G ++ A++VF++M +R+ VSWN++I+A+  + D   A G F  M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544

Query: 337 QQAGIQPD------LLTLVSLTSIVAQLNDCRNSRS-VHGFIMRRGWFMEDVIIGNAVVD 389
            ++G+QPD      +LT  S    V Q  +   + S ++G   ++  +         ++D
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA-------CMLD 597

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEIN 445
           +  + G    A  + + +P + D I W++++     +    LA  A E    ME+     
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR--- 654

Query: 446 PNQGTYVSILPAYSHVG 462
            +   YVS+   Y+  G
Sbjct: 655 -DAAAYVSMSNIYAAAG 670


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 270/683 (39%), Positives = 419/683 (61%), Gaps = 3/683 (0%)

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           T  L P   +   +L+  ++L   ++IH  ++  G   + F++ SL++ Y   GL   A+
Sbjct: 17  TQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK 76

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++F   P ++  SW  +ISG  ++   VEA+D+  EM +     + +T++S+LP  A   
Sbjct: 77  QIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLG 136

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            I     +H + V+ G E N+FV   L++MY+KFG M  A ++F+ M ER+VVSWN+I++
Sbjct: 137 LIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVS 196

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y        A   F  M++ G+  D  T++SL      +   +    +HGFI+R G + 
Sbjct: 197 GYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG-YE 255

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D  I  A++D+Y     ++ A  VF  + VKDV +W  ++TG++       AI+ F  M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                +  +    + IL + SH GAL+QG ++HA  IK C   ++FV + ++DMY  CG 
Sbjct: 316 LGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGN 375

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++DA   FY +     V WNA+I+ +G++G G  A++ F QM   G+ PD  TFVS+L A
Sbjct: 376 LEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435

Query: 559 CSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           CSH+G+V EG Q ++HM++    I P+L+HY C++D+ GRAG L  A++FI NMP +PD 
Sbjct: 436 CSHAGMVYEGLQIFYHMVKTSHDI-PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDF 494

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            ++  LLGACRIHGN++LG   S ++FE++  + GYYVL+SN+YA  G WEGV   R+  
Sbjct: 495 DVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASL 554

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           R + LKK PG+SSIE+N ++  F  G + HP+Y KI   L+ L  K+K  GYVP+ + +L
Sbjct: 555 RSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLL 614

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
           QDV +D K+ IL  HSE++AIAFG++ + P + I+I KNLR C DCH+ +KF+S++  R 
Sbjct: 615 QDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRV 674

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           ++++D+NRFH F+DG+CSC DYW
Sbjct: 675 LVIKDANRFHVFQDGVCSCRDYW 697



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 245/465 (52%), Gaps = 12/465 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           + +    L  ++++HA ++ SG     F S  L+N Y   G L+ ++  F H   +NV +
Sbjct: 30  ILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVS 89

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSV 169
           W  +IS   +     EA+D F + T+    +P+  T   VL A  NL      K +HC  
Sbjct: 90  WTILISGLAKNDCFVEAIDVFREMTM-GNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++ GFE +VFV  +L+ MY +FG   VAR+LF+ M  R+  SWNA++SGY   G + EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAI 208

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+ + MR +G+ +D  T+ S++P       +  G  IH +I++ G E +  +   L+++Y
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY 268

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP---DLL 346
                +  A RVF +M  +DV +W  ++  +        A   F  M   GIQ    D +
Sbjct: 269 VSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM--LGIQNLKLDSI 326

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
            L+ + S  +     +  R VH   ++   F  ++ +G+AV+DMYA  G +  A   F G
Sbjct: 327 VLMGILSSCSHSGALQQGRRVHALAIKT-CFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  KDV+ WN +I G   NG  ++AI++F  M+  + ++P++ T+VS+L A SH G + +
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKG-SGLDPDESTFVSVLYACSHAGMVYE 444

Query: 467 GIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           G++I   ++K      ++    C++D+ G+ G++D A S    +P
Sbjct: 445 GLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMP 489



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 195/412 (47%), Gaps = 9/412 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V  G    VF  T LV+ Y+  G +  +R  F+ +S RNV +WN+++S Y   
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDH 201

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   EA+D F       GL  DFYT   ++ A  +   L  G  IH  +++ G+E D  +
Sbjct: 202 GFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHI 260

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEG 239
             +L+ +Y      + A ++F +M V+D  +W  M++G+    +   A+   ++M  ++ 
Sbjct: 261 KTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQN 320

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           + +D I +  IL  C+ S  +  G  +H   +K     N+FV + +I+MYA  G +  A 
Sbjct: 321 LKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           R F  M E+DVV WN++IA    +     A   F  M+ +G+ PD  T VS+    +   
Sbjct: 381 RFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAG 440

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
                  +   +++    + ++     V+D+  + G +++A +    +P + D   ++TL
Sbjct: 441 MVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTL 500

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +     +G      E+ Q   +  E+ PN   Y  +L     +    +G+K+
Sbjct: 501 LGACRIHGNIKLGHEISQ---KIFEMEPNDAGYYVLLSNMYALAGNWEGVKM 549


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/762 (38%), Positives = 449/762 (58%), Gaps = 9/762 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-RNVYTWNSMISVYVRC 123
           ++HA+ V +G    +F +  LV  Y   G +  +R  FD  +  RN  +WN M+S +V+ 
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            R S+AV+ F +  + SG+RP+ + F  V+ AC   R+L  G+K+H  V++ G++ DVF 
Sbjct: 181 DRCSDAVELFGEM-VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT 239

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A +L+ MY + G  ++A  +F  +P  D  SWNA ISG    G+   AL++L +M+  G+
Sbjct: 240 ANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299

Query: 241 SMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
             +  T++SIL  CA +      L   IH +++K   + + ++   L++MYAK+G++  A
Sbjct: 300 VPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDA 359

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +VF+ +  +D++ WN++I+          +   F  M++ G   +  TL ++    A L
Sbjct: 360 RKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASL 419

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
               ++  VH    + G F+ D  + N ++D Y K   +  A  VFE     ++I++ ++
Sbjct: 420 EAISDTTQVHALAEKIG-FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSM 478

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           IT  +Q     +AI++F  M     + P+     S+L A + + A  QG ++HA +IK  
Sbjct: 479 ITALSQCDHGEDAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRK 537

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              DVF    LV  Y KCG I+DA   F  +P    V W+A+I     HG G +AL+ FR
Sbjct: 538 FMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFR 597

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M+DE + P+HIT  S+L AC+H+GLV E + YF  M+E FGI    +HY CM+DL GRA
Sbjct: 598 RMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRA 657

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A   + +MP   +A++WGALL A R+H + ELG +A+++LF ++ E  G +VL++
Sbjct: 658 GKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLA 717

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N YA+ G W+ V +VR L +D  +KK P  S +E+ ++V  F  G+++HP+   IY +L 
Sbjct: 718 NTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLE 777

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            L   M   GYVP+    L DV++ EKE +L+ HSERLA+AF +IS+P  +PI++ KNLR
Sbjct: 778 ELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLR 837

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +C DCH   KFIS+I  REII+RD NRFHHF DG CSCGDYW
Sbjct: 838 ICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 259/492 (52%), Gaps = 15/492 (3%)

Query: 47  EIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  +  +CT    L   +++HA++V +G  K VF++  LV+ Y+ LGD+  +   F 
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFG 261

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK-----ACRN 158
            +   +V +WN+ IS  V  G    A++   Q   +SGL P+ +T   +LK         
Sbjct: 262 KVPKTDVVSWNAFISGCVLHGHDQHALELLLQMK-SSGLVPNVFTLSSILKACAGAGAGA 320

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              G++IH  ++K   + D ++  +L+ MY ++GL + ARK+F+ +P +D   WNA+ISG
Sbjct: 321 FALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISG 380

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
               G   E+L +   MR EG  ++  T+A++L   A  + I     +H    K G   +
Sbjct: 381 CSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSD 440

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
             V N LI+ Y K   +R+A +VF++    +++++ S+I A  Q +    A   F  M +
Sbjct: 441 SHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLR 500

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G++PD   L SL +  A L+     + VH  +++R  FM DV  GNA+V  YAK G I 
Sbjct: 501 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRK-FMTDVFAGNALVYTYAKCGSIE 559

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A   F GLP K V+SW+ +I G AQ+G    A++VF+ M +   I PN  T  S+L A 
Sbjct: 560 DADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVD-ERIAPNHITLTSVLCAC 618

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
           +H G + +  K +   +K     D      +C++D+ G+ G++DDAM L   +P  +++ 
Sbjct: 619 NHAGLVDEA-KGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAA 677

Query: 516 PWNAIISCHGIH 527
            W A+++   +H
Sbjct: 678 VWGALLAASRVH 689



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/572 (27%), Positives = 286/572 (50%), Gaps = 14/572 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HA L+ SG +        L++FY+       +R  FD        +W+S+++ Y     
Sbjct: 26  IHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNAL 83

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
             EA+  F       G+R + +  P VLK   +   G ++H   +  G   D+FVA +L+
Sbjct: 84  PREALAAFRAMR-ARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALV 142

Query: 186 HMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            MY  FG  + AR++FD+    R++ SWN M+S + ++    +A+++  EM   GV  + 
Sbjct: 143 AMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNE 202

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
              + ++  C  S ++ +G  +H  +V+ G + ++F +N L++MY+K G +  A  VF +
Sbjct: 203 FGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGK 262

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL--TSIVAQLNDCR 362
           + + DVVSWN+ I+          A      M+ +G+ P++ TL S+      A      
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             R +HGF+++     +D  IG A+VDMYAK G+++ A  VFE +P KD++ WN LI+G 
Sbjct: 323 LGRQIHGFMIKACADSDD-YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGC 381

Query: 423 AQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           +  G   E++ +F +M +E ++I  N+ T  ++L + + + A+    ++HA   K     
Sbjct: 382 SHGGCHGESLSLFCRMRKEGSDI--NRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLS 439

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D  V   L+D Y KC  +  A  +F +    + + + ++I+       G+ A+  F +ML
Sbjct: 440 DSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML 499

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            +G+ PD     SLL AC+      +G Q + H+++ +F       +   +V  + + G 
Sbjct: 500 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGN--ALVYTYAKCGS 557

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           +  A      +P +   S W A++G    HG+
Sbjct: 558 IEDADLAFSGLPDKGVVS-WSAMIGGLAQHGH 588


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 295/791 (37%), Positives = 441/791 (55%), Gaps = 37/791 (4%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANL 92
           +S +  E E+  +    +  +CTK+      K+LH L++  G     +    LV  Y+  
Sbjct: 240 LSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRS 299

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G+LS +   F  +S R+  ++NS+IS   + G ++ A+  F +  L    +PD  T   +
Sbjct: 300 GNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ-KPDCVTVASL 358

Query: 153 LKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L AC +   L +GK+ H   +K G   D+ V  SLL +Y +      A + F        
Sbjct: 359 LSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-------- 410

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
                    Y Q  N  ++  I  +M++EG+  +  T  SIL  C        G  IH  
Sbjct: 411 -------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQ 463

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           ++K G +FN++VS+ LI+MYAK G + HAL++F ++ E DVVSW ++IA Y Q +    A
Sbjct: 464 VLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEA 523

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  MQ  GI+ D +   S  S  A +      R +H      G + +D+ IGNA+V 
Sbjct: 524 LNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG-YSDDLSIGNALVS 582

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +YA+ G +  A A F+ +  KD +SWN+L++G+AQ+G   EA+ +F  M +   +  N  
Sbjct: 583 LYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAG-LEINSF 641

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+ S + A +++  +R G +IH  + K     +  V+  L+ +Y KCG IDD        
Sbjct: 642 TFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD-------- 693

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
                + WN++I+ +  HG G +AL  F  M    V P+H+TFV +L+ACSH GLV EG 
Sbjct: 694 -----ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGI 748

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            YF  M E   + P  +HY C+VDL GR+G L  A  F++ MP++PDA +W  LL AC +
Sbjct: 749 SYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNV 808

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
           H N+++G  A+  L E++ ++   YVL+SN+YA  GKW+  D  R + +DRG+KK PG S
Sbjct: 809 HKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRS 868

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
            +EV+N V  F+ G++ HP+ + IY+ LR L  +    GYVP  + +L D E  +K+   
Sbjct: 869 WVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTE 928

Query: 750 TSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
             HSERLAIAFG++S    +P+ +FKNLRVC DCHNW K +S+IT+R IIVRDS RFHHF
Sbjct: 929 IIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHF 988

Query: 810 KDGICSCGDYW 820
           K G CSC DYW
Sbjct: 989 KVGSCSCKDYW 999



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 173/635 (27%), Positives = 303/635 (47%), Gaps = 52/635 (8%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           ++ +   KL++FY   GDL+ + + FD +  R++  WN + + ++   RL   V   ++ 
Sbjct: 95  RSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFI-AERLMGRVPGLFRR 153

Query: 137 TLTSGLRPDFYTFPPVLKACR-NLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            LT  +  D   F  VL+ C  N V  +   +IH   +  GFE   F+   L+ +Y + G
Sbjct: 154 MLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNG 213

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + A+K+F+++  RDS SW AMISG  Q+G   EA+ +  ++              +L 
Sbjct: 214 FLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLS 259

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C + +    G  +H  ++K G     +V N L+ +Y++ G +  A ++F  M +RD VS
Sbjct: 260 ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS 319

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           +NS+I+   Q      A   F  M     +PD +T+ SL S  A +    N +  H + +
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           + G    D+++  +++D+Y K   I +A   F                 Y Q    +++ 
Sbjct: 380 KAG-MTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSF 423

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           ++F  M +   I PNQ TY SIL   + +GA   G +IH +V+K    F+V+V++ L+DM
Sbjct: 424 QIFTQM-QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDM 482

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y K G++D A+ +F ++  +  V W A+I+ +  H +  +ALN F++M D+G++ D+I F
Sbjct: 483 YAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            S ++AC+    + +G R  H      G    L     +V L+ R G +  A+     + 
Sbjct: 543 ASAISACAGIQALDQG-RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY 601

Query: 613 VRPDASIWGALLGACRIHGNME----LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
            + + S W +L+      G  E    + A  +    E++S   G  V  +   AN     
Sbjct: 602 AKDNVS-WNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIAN----- 655

Query: 669 GVDEVRSLARDRGLKKTPGW-SSIEVNNKVDIFYT 702
               VR   +  G+ +  G+ S  EV+N +   Y 
Sbjct: 656 ----VRIGKQIHGMIRKTGYDSETEVSNALITLYA 686



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/564 (27%), Positives = 279/564 (49%), Gaps = 39/564 (6%)

Query: 45  SREIDFDD-----LFQSCT----KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           ++ ++FD+     + + C+        V+++HA  + SG   + F    L++ Y   G L
Sbjct: 156 TKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFL 215

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
           S ++  F+++  R+  +W +MIS   + G   EA+  F Q  L++  + +F+ F      
Sbjct: 216 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEF------ 269

Query: 156 CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
                 GK++H  VLK GF  + +V  +L+ +Y R G  + A ++F  M  RD  S+N++
Sbjct: 270 ------GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSL 323

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           ISG  Q G    AL +  +M L+    D +TVAS+L  CA    + +G   H Y +K G+
Sbjct: 324 ISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM 383

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             ++ V  +L+++Y K                 D+ + +     Y Q ++   +   FT 
Sbjct: 384 TSDIVVEGSLLDLYVKCS---------------DIKTAHEFFLCYGQLDNLNKSFQIFTQ 428

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           MQ  GI P+  T  S+      L        +H  +++ G F  +V + + ++DMYAK G
Sbjct: 429 MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG-FQFNVYVSSVLIDMYAKHG 487

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            ++ A  +F  L   DV+SW  +I GY Q+   +EA+ +F+ M++    + N G + S +
Sbjct: 488 KLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIG-FASAI 546

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A + + AL QG +IHA+   +    D+ +   LV +Y +CG++ +A + F Q+    +V
Sbjct: 547 SACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNV 606

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN+++S     G  ++ALN F QM   G+  +  TF S ++A ++   V  G++  H M
Sbjct: 607 SWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ-IHGM 665

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAG 599
             + G     +    ++ L+ + G
Sbjct: 666 IRKTGYDSETEVSNALITLYAKCG 689


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 286/710 (40%), Positives = 419/710 (59%), Gaps = 8/710 (1%)

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 172
           +I+ Y++    ++A    Y +   +    D +  P VLKAC    + + G+++H  V+K 
Sbjct: 95  LITSYIKNNCPADAAK-IYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKN 153

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF  DVFV  +L+ MY   G   +AR LFD +  +D  SW+ MI  Y +SG   EALD+L
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL--EFNLFVSNNLINMYA 290
            +M +  V    I + SI  V A   ++  G  +H Y++++G   +  + +   LI+MY 
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K   + +A RVFD + +  ++SW ++IAAY   N+       F  M   G+ P+ +T++S
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           L             + +H F +R G F   +++  A +DMY K G + SA +VF+    K
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNG-FTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK 392

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D++ W+ +I+ YAQN    EA ++F  M  C  I PN+ T VS+L   +  G+L  G  I
Sbjct: 393 DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCG-IRPNERTMVSLLMICAKAGSLEMGKWI 451

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H+ + K  +  D+ + T  VDMY  CG ID A  LF +        WNA+IS   +HG G
Sbjct: 452 HSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHG 511

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           + AL  F +M   GV P+ ITF+  L ACSHSGL+ EG+R FH M  EFG  P ++HYGC
Sbjct: 512 EAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGC 571

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVDL GRAG L  AH  I++MP+RP+ +++G+ L AC++H N++LG  A+ +   ++   
Sbjct: 572 MVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHK 631

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
            GY VLMSNIYA+  +W  V  +R   +D G+ K PG SSIEVN  +  F  G+R HP  
Sbjct: 632 SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDA 691

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           +K+Y+ +  +  K++  GY PD S VL ++++++K   L  HSE+LA+A+G+IS+ P  P
Sbjct: 692 KKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVP 751

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+I KNLRVC DCHN TK +S+I  REIIVRD NRFHHFK+G CSC DYW
Sbjct: 752 IRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 238/458 (51%), Gaps = 9/458 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H  +V +G    VF    L+  Y+ +G L+ +R  FD I  ++V +W++MI  Y R 
Sbjct: 144 QEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRS 203

Query: 124 GRLSEAVDCFYQFTLTSGLRPD---FYTFPPVLKACRNLVDGKKIHCSVLKLG--FEWDV 178
           G L EA+D      +   ++P      +   VL    +L  GK +H  V++ G   +  V
Sbjct: 204 GLLDEALDLLRDMHVMR-VKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGV 262

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            +  +L+ MY +      AR++FD +      SW AMI+ Y    N  E + +  +M  E
Sbjct: 263 PLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGE 322

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G+  + IT+ S++  C  +  +  G L+H + +++G   +L ++   I+MY K G +R A
Sbjct: 323 GMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSA 382

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VFD    +D++ W+++I++Y Q+N    A   F  M   GI+P+  T+VSL  I A+ 
Sbjct: 383 RSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKA 442

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + +H +I ++G    D+I+  + VDMYA  G I++A  +F     +D+  WN +
Sbjct: 443 GSLEMGKWIHSYIDKQG-IKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAM 501

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKN 477
           I+G+A +G    A+E+F+ ME    + PN  T++  L A SH G L++G ++ H  V + 
Sbjct: 502 ISGFAMHGHGEAALELFEEMEALG-VTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEF 560

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
                V    C+VD+ G+ G +D+A  L   +P   ++
Sbjct: 561 GFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNI 598


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 284/767 (37%), Positives = 453/767 (59%), Gaps = 13/767 (1%)

Query: 59  KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           K    KR  + LV    +    S T+ ++ Y   G +  +   F+++   + + WN MI 
Sbjct: 44  KTARSKRNQSFLVERNSV----SLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIR 99

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            +V  G   +AVD FY      G+R D +T+P V+KAC  L D   G+++H  V+K G +
Sbjct: 100 GFVDNGLFWDAVD-FYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLD 158

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            D+++  SL+ MY + G    A  +F +MPVRD  SWN+MISGY   G+   +L    EM
Sbjct: 159 LDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREM 218

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           +  G+ +D  +V  IL  C+    + +G  IH  +++  LE ++ V  +L++MYAK G M
Sbjct: 219 QASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRM 278

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSI 354
            +A R+FDQ+ ++ +V+WN++I  Y  +     +  +   MQ+ G + PD +T+++L   
Sbjct: 279 DYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPP 338

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            AQL      +SVHGF +R G F+  +++  A+VDMY + G +  A  +F  +  +++IS
Sbjct: 339 CAQLEAILLGKSVHGFAIRNG-FLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLIS 397

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           WN +I  Y +NG   +A+ +FQ +  CN+ + P+  T  SILPAY+ + +LR+  +IH  
Sbjct: 398 WNAMIASYTKNGENRKAMTLFQDL--CNKTLKPDATTIASILPAYAELASLREAEQIHGY 455

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           V K  L  + FV+  +V MYGKCG +  A  +F ++     + WN +I  + IHG G  +
Sbjct: 456 VTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRIS 515

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           +  F +M ++G  P+  TFVSLL +CS +GLV+EG  YF+ M+ ++ I P ++HYGC++D
Sbjct: 516 IELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILD 575

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L GR G+L  A NFI+ MP+ P A IWG+LL A R  G++EL  +A++ +  ++ +N G 
Sbjct: 576 LIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGC 635

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YVL+SN+YA  G+WE V+ ++   +  GL+K+ G S +++++K   F   +R+  +   +
Sbjct: 636 YVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMV 695

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
           YD L  ++ K+    YV   +       E ++ +   SHS RLAI FG+IS+   +P+ +
Sbjct: 696 YDVLDIISKKIGEDVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLV 755

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KN+R+C  CH + K IS+ T+REIIVRDS  FHHF  G CSCGDYW
Sbjct: 756 RKNIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 7/186 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           +     L   +++H  +         F S  +V  Y   G+L  +R  FD +++++V +W
Sbjct: 440 YAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISW 499

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKKIHCSVLK 171
           N++I  Y   G    +++ F +     G  P+  TF  +L +C    LV+    + + +K
Sbjct: 500 NTVIMAYAIHGFGRISIELFSEMR-EKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMK 558

Query: 172 LGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEA 228
             +  +  +     +L +  R G  + A+   ++MP+  +   W ++++     G+ VE 
Sbjct: 559 RDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGD-VEL 617

Query: 229 LDILDE 234
            +I  E
Sbjct: 618 AEIAAE 623


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 296/782 (37%), Positives = 445/782 (56%), Gaps = 16/782 (2%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSST---KLVNFYANLGDLSFSRHTFD 103
           +  + Q C+++  +   KR H L+  S   +    +    KLV  Y   GDL  +R  FD
Sbjct: 94  YGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFD 153

Query: 104 HI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--- 159
            +    +V  W +++S Y + G L E V  F +     G+RPD YT   VLK    L   
Sbjct: 154 EMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMH-CCGVRPDAYTISCVLKCIAGLGSI 212

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            DG+ +H  + KLGF     V  +L+  Y +      A  +FD MP RD  SWN+MISG 
Sbjct: 213 EDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGC 272

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
             +G   +A+++   M LEG  +D  T+ S+LP CA    +  G ++H Y VK G     
Sbjct: 273 TSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQT 332

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            ++N L++MY+     R   ++F  M++++VVSW ++I +Y ++       G F  M   
Sbjct: 333 SLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLE 392

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIIN 398
           G +PD+  + S     A     ++ +SVHG+ +R G  ME V+ + NA+++MY K G + 
Sbjct: 393 GTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNG--MEKVLAVTNALMEMYVKCGNME 450

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  +F+G+  KD+ISWNTLI GY++N LA+EA  +F  M    ++ PN  T   ILPA 
Sbjct: 451 EAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM--LLQLRPNAVTMTCILPAA 508

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + + +L +G ++HA  ++     D FVA  L+DMY KCG +  A  LF ++   + + W 
Sbjct: 509 ASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWT 568

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +++ +G+HG+G  A+  F QM   G+ PD  +F ++L ACSHSGL  EG R+F  M++E
Sbjct: 569 IMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKE 628

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
             I+P LKHY CMVDL    G+L  A+ FI +MP+ PD+SIW +LL  CRIH N++L   
Sbjct: 629 HKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEE 688

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            ++R+FE++ EN GYYVL++NIYA   +WE V ++++    RGL++  G S IE   KV 
Sbjct: 689 VAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVH 748

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
           +F   NR HP+  +I + L  +  +M+  G+ P K + L   +       L  HS +LA+
Sbjct: 749 VFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAV 808

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+++      I++ KN RVC  CH   KFIS++  REII+RDSNRFHHF+ G CSC  
Sbjct: 809 AFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRG 868

Query: 819 YW 820
           YW
Sbjct: 869 YW 870



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 207/435 (47%), Gaps = 18/435 (4%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A K  D +P  D    N  I   C+SG+  EAL +L     +GV  D  +  ++L +C+ 
Sbjct: 52  AEKSPDWVPTSDV---NLHIQRLCRSGDLEEALGLLGS---DGV--DDRSYGAVLQLCSE 103

Query: 257 SDNILSGLLIHLYIVKHGL---EFNLFVSNNLINMYAKFGMMRHALRVFDQMME-RDVVS 312
             ++  G   H  +    L     +  +   L+ MY K G + +A RVFD+M +  DV  
Sbjct: 104 VRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRV 163

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           W ++++ Y ++ D       F  M   G++PD  T+  +   +A L    +   VHG + 
Sbjct: 164 WTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLE 223

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           + G F     +GNA++  YAK      A  VF+G+P +DVISWN++I+G   NGL  +AI
Sbjct: 224 KLG-FGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAI 282

Query: 433 EVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           E+F +M  E  E+  +  T +S+LPA + +  L  G  +H   +K        +A  L+D
Sbjct: 283 ELFVRMWLEGEEL--DSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLD 340

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY  C        +F  + + + V W A+I+ +   G  DK    F++M  EG RPD   
Sbjct: 341 MYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFA 400

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
             S L A + + L+  G +  H      G++  L     +++++ + G++  A   I + 
Sbjct: 401 ITSALHAFAGNELLKHG-KSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEA-KLIFDG 458

Query: 612 PVRPDASIWGALLGA 626
            V  D   W  L+G 
Sbjct: 459 VVSKDMISWNTLIGG 473


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 283/744 (38%), Positives = 428/744 (57%), Gaps = 21/744 (2%)

Query: 77   KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
            K +FS   +++ Y++ GDL  ++H F    +RN  TW  M+  +   GR S+A+  F + 
Sbjct: 286  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLF-RA 344

Query: 137  TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
             L  G+ PD  T   VL      V    +H   +K G +  VFV  +LL  YC+ GL   
Sbjct: 345  MLGEGVIPDRVTVTTVLNLPGCTV--PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 402

Query: 197  ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
            AR++F +M  +D+ ++NAM+ G  + G   +AL +   MR  G S  P+ +       +R
Sbjct: 403  ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSR 462

Query: 257  SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
            S ++L                N+FV+N+L++ Y+K   +    R+FD+M ERD VS+N I
Sbjct: 463  STSVL----------------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 506

Query: 317  IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
            IAAY  +    T    F  MQ+ G    +L   ++ S+   L D    + +H  ++  G 
Sbjct: 507  IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 566

Query: 377  FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              ED ++GNA++DMY+K G++++A + F     K  ISW  LITGY QNG   EA+++F 
Sbjct: 567  ASED-LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFS 625

Query: 437  MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
             M     + P++ T+ SI+ A S +  +  G ++H+ +I++     VF  + LVDMY KC
Sbjct: 626  DMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 684

Query: 497  GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
            G +D+A+  F ++P  +S+ WNA+IS +  +G+   A+  F  ML  G  PD +TF+S+L
Sbjct: 685  GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 744

Query: 557  TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
             ACSH+GL  E  +YFH+M+ ++ I P  +HY C++D  GR G        +  MP + D
Sbjct: 745  AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 804

Query: 617  ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
              IW ++L +CRIHGN EL  VA+D+LF ++  +   YV++SNIYA  G+WE    V+ +
Sbjct: 805  PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 864

Query: 677  ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
             RDRG++K  G+S +E+  K+  F + + T P  ++I DEL  L  +M   GY PD +  
Sbjct: 865  MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCA 924

Query: 737  LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
            L  V+ + K   L  HSERLAIAF ++++P  +PI+I KNL  C DCH   K IS+I  R
Sbjct: 925  LHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNR 984

Query: 797  EIIVRDSNRFHHFKDGICSCGDYW 820
            +IIVRDS RFHHFKDG+CSCGDYW
Sbjct: 985  DIIVRDSRRFHHFKDGVCSCGDYW 1008



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 173/352 (49%), Gaps = 7/352 (1%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           S  +  VF +  L++FY+    L   R  FD +  R+  ++N +I+ Y    + +  V  
Sbjct: 463 STSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA-WNQCAATVLR 521

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYC 189
            ++     G       +  +L    +L D   GK+IH  ++ LG   +  +  +L+ MY 
Sbjct: 522 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 581

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G+ + A+  F +   + + SW A+I+GY Q+G   EAL +  +MR  G+  D  T +S
Sbjct: 582 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 641

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           I+   +    I  G  +H Y+++ G + ++F  + L++MYAK G +  ALR FD+M ER+
Sbjct: 642 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 701

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
            +SWN++I+AY    +   A   F  M   G  PD +T +S+ +  +  N   +    + 
Sbjct: 702 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYF 760

Query: 370 FIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
            +M+  + +       A V+D   ++G  +    +   +P K D I W +++
Sbjct: 761 HLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSIL 812



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 162/331 (48%), Gaps = 19/331 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   +H  K++HA LV+ G          L++ Y+  G L  ++  F + S ++  +W +
Sbjct: 547 SLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTA 606

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           +I+ YV+ G+  EA+  F      +GLRPD  TF  ++KA  +L     G+++H  +++ 
Sbjct: 607 LITGYVQNGQHEEALQLFSDMR-RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 665

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G++  VF  + L+ MY + G  + A + FD+MP R+S SWNA+IS Y   G A  A+ + 
Sbjct: 666 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 725

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN--LINMYA 290
           + M   G + D +T  S+L  C+  + +    + + +++KH    + +  +   +I+   
Sbjct: 726 EGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 784

Query: 291 KFGMMRHALRVFDQM-MERDVVSWNSIIAAYE----QSNDPITAHGFFTTMQQAGIQP-D 344
           + G      ++  +M  + D + W SI+ +      Q    + A   F      G++P D
Sbjct: 785 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF------GMEPTD 838

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
               V L++I A+     ++  V   +  RG
Sbjct: 839 ATPYVILSNIYARAGQWEDAACVKKIMRDRG 869



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 159/370 (42%), Gaps = 50/370 (13%)

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-PITAHGFFTTMQQ------------- 338
           G +  A  +FDQM  +++ S N I++AY  S D P   H F ++  +             
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330

Query: 339 -AGIQPDLLTL-------------VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
            AG   D L+L             V++T+++  L  C    S+H F ++ G     V + 
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVL-NLPGC-TVPSLHPFAIKFG-LDTHVFVC 387

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N ++D Y K G++ +A  VF  +  KD +++N ++ G ++ GL ++A+++F  M      
Sbjct: 388 NTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA--- 444

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
                 +   L  YSH  +            ++    +VFV   L+D Y KC  +DD   
Sbjct: 445 --GYSRHPLHLLQYSHSRS------------RSTSVLNVFVNNSLLDFYSKCDCLDDMRR 490

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           LF ++P   +V +N II+ +  +      L  FR+M   G     + + ++L+       
Sbjct: 491 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 550

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V  G++  H      G+         ++D++ + G L  A +   N   +   S W AL+
Sbjct: 551 VHIGKQ-IHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS-WTALI 608

Query: 625 GACRIHGNME 634
                +G  E
Sbjct: 609 TGYVQNGQHE 618


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/716 (37%), Positives = 428/716 (59%), Gaps = 7/716 (0%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           +V  WN  +S Y++ G   EAVDCF    + S +  D  T+  +L    +L     GK+I
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVVASLNHLELGKQI 319

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H +V++ G++  V VA S ++MY + G  N AR++F  M   D  SWN +ISG  +SG  
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             +L +  ++   G+  D  T+ S+L  C+   ++   G  +H   +K G+  + FVS  
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTA 439

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI++Y+K G M  A  +F      D+ SWN+++  +  S++   A   F+ M + G + D
Sbjct: 440 LIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKAD 499

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T  +       L   +  + +H  +++   F  D+ + + ++DMY K G + SA  VF
Sbjct: 500 QITFANAAKAAGCLVRLQQGKQIHAVVIKMR-FHYDLFVISGILDMYLKCGEMKSARKVF 558

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P  D ++W T+I+G  +NG   +A+  +  M     + P++ T+ +++ A S + AL
Sbjct: 559 NQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDEYTFATLVKACSLLTAL 617

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
            QG +IHA ++K    FD FV T LVDMY KCG I+DA  LF ++   S   WNA+I   
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             HG  ++ALNFF +M   GV PD +TF+ +L+ACSHSGL S+  + F  MQ+ +G++P 
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPE 737

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           ++HY C+VD   RAGH+  A   + +MP    A+++  LL ACR+ G+ E G   +++LF
Sbjct: 738 IEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
            +D  +   YVL+SNIYA   +WE     R++ +   +KK PG+S I++ NKV +F  G+
Sbjct: 798 TMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGD 857

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
           R+H + + IY+++  +  ++K  GYVPD  F L D+EE++KE  L+ HSE+LAIA+G++ 
Sbjct: 858 RSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMK 917

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +PP + +++ KNLRVCGDCHN  K+IS + +REI++RD+NRFHHF+ GICSCGDYW
Sbjct: 918 TPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 170/558 (30%), Positives = 275/558 (49%), Gaps = 32/558 (5%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           VF +  LVN YA    +  +R  FD +  R+V  WN M+  YV  G   E +  F  F  
Sbjct: 157 VFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFH- 215

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
            SGLRPD  +   +L        GKK   +V +   E                 +   A 
Sbjct: 216 RSGLRPDCVSVRTILMGV-----GKK---TVFERELE----------------QVRAYAT 251

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           KLF      D   WN  +S Y Q+G   EA+D   +M    V  D +T   IL V A  +
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           ++  G  IH  +V+ G +  + V+N+ INMY K G + +A R+F QM E D++SWN++I+
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVIS 371

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR-NSRSVHGFIMRRGWF 377
              +S     +   F  + ++G+ PD  T+ S+    + L +     R VH   ++ G  
Sbjct: 372 GCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV 431

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           + D  +  A++D+Y+K G +  A  +F      D+ SWN ++ G+  +    EA+ +F +
Sbjct: 432 L-DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSL 490

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M E  E   +Q T+ +   A   +  L+QG +IHA VIK    +D+FV + ++DMY KCG
Sbjct: 491 MHERGE-KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCG 549

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            +  A  +F Q+P    V W  +IS    +G+ ++AL  + QM   GV+PD  TF +L+ 
Sbjct: 550 EMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVK 609

Query: 558 ACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           ACS    + +G++ + ++M+      P +     +VD++ + G++  A+   + M  R  
Sbjct: 610 ACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667

Query: 617 ASIWGALLGACRIHGNME 634
           A +W A++     HGN E
Sbjct: 668 A-LWNAMIVGLAQHGNAE 684



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 273/585 (46%), Gaps = 48/585 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYV 121
           KR HA++V SG     + +  L+  YA  G L  +R  FD    S R++ T+N++++ Y 
Sbjct: 33  KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYA 92

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDF-----YTFPPVLKACRNLVDG-----KKIHCSVLK 171
             G L +       F +   LR        +T  P+ K C  L+ G     + +    +K
Sbjct: 93  HTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLC--LLYGSPSASEALQGYAVK 150

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           +G +WDVFVA +L+++Y +F     AR LFD MPVRD   WN M+  Y + G   E L +
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYA 290
                  G+  D ++V +IL    +       L  +  Y  K      LFV ++      
Sbjct: 211 FSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK------LFVCDD------ 258

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
                           + DV  WN  +++Y Q+ +   A   F  M ++ +  D LT + 
Sbjct: 259 ----------------DSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           + S+VA LN     + +HG ++R GW  + V + N+ ++MY K G +N A  +F  +   
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGW-DQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV-GALRQGIK 469
           D+ISWNT+I+G A++GL   ++ +F  +     + P+Q T  S+L A S +  +   G +
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLEESYCVGRQ 420

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H   +K  +  D FV+T L+D+Y K G++++A  LF+         WNA++    +   
Sbjct: 421 VHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDN 480

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
             +AL  F  M + G + D ITF +   A      + +G++  H +  +      L    
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQ-IHAVVIKMRFHYDLFVIS 539

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            ++D++ + G +  A      +P  PD   W  ++  C  +G  E
Sbjct: 540 GILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEE 583



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 226/502 (45%), Gaps = 40/502 (7%)

Query: 140 SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           S L P +++      A  +L+ GK+ H  ++  G   D +V  +L+ MY + G    ARK
Sbjct: 10  SSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARK 69

Query: 200 LFDDMPV--RDSGSWNAMISGYCQSG------NAVEALDILDEMRLEGVSMDPITVASIL 251
           LFD  P   RD  ++NA+++ Y  +G         EA  I   +R   +     T++ + 
Sbjct: 70  LFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLF 129

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            +C    +  +   +  Y VK GL++++FV+  L+N+YAKF  +R A  +FD+M  RDVV
Sbjct: 130 KLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVV 189

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
            WN ++ AY +        G F+   ++G++P                DC + R++   +
Sbjct: 190 LWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP----------------DCVSVRTILMGV 233

Query: 372 MRRGWFMEDVIIGNAVVDMYA-KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
            ++  F  ++      V  YA KL + +            DV  WN  ++ Y Q G   E
Sbjct: 234 GKKTVFEREL----EQVRAYATKLFVCDDD---------SDVTVWNKTLSSYLQAGEGWE 280

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A++ F+ M + + +  +  TY+ IL   + +  L  G +IH  V++      V VA   +
Sbjct: 281 AVDCFRDMIK-SRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           +MY K G ++ A  +F Q+     + WN +IS     G  + +L  F  +L  G+ PD  
Sbjct: 340 NMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQF 399

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           T  S+L ACS         R  H    + GI         ++D++ + G +  A     N
Sbjct: 400 TITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHN 459

Query: 611 MPVRPDASIWGALLGACRIHGN 632
                D + W A++    +  N
Sbjct: 460 QD-GFDLASWNAMMHGFTVSDN 480



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 11/205 (5%)

Query: 47  EIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  L ++C   T L   K++HA ++        F  T LV+ YA  G++  +   F 
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            ++ R+V  WN+MI    + G   EA++ F +   + G+ PD  TF  VL AC +     
Sbjct: 661 RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMK-SRGVTPDRVTFIGVLSACSHSGLTS 719

Query: 161 DGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           D  K   S+ K  G E ++   + L+    R G    A K+   MP   S +    +   
Sbjct: 720 DAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNA 779

Query: 220 CQSGNAVEALDILDEMRLEGVSMDP 244
           C+     E  + + E      +MDP
Sbjct: 780 CRVQGDKETGERVAEKLF---TMDP 801


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/747 (38%), Positives = 442/747 (59%), Gaps = 15/747 (2%)

Query: 85  LVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           L++ Y+  G    +   F  + S R++ +W++M+S +        A+  F    + +G  
Sbjct: 107 LISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM-IENGYY 165

Query: 144 PDFYTFPPVLKACRN---LVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANV--A 197
           P+ Y F    +AC     +  G  I   V+K G+ + DV V   L+ M+ + G  ++  A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK-GRGDLVSA 224

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            K+F+ MP R++ +W  MI+   Q G A EA+D+  EM L G   D  T++ ++  CA  
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF---GMMRHALRVFDQMMERDVVSWN 314
           + +L G  +H   ++HGL  +  V   LINMYAK    G M  A ++FDQ+++ +V SW 
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344

Query: 315 SIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           ++I  Y Q       A   F  M    + P+  T  S     A L   R    V    ++
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G F     + N+++ MYA+ G I+ A   F+ L  K++IS+NT+I  YA+N  + EA+E
Sbjct: 405 LG-FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  +E+   +  +  T+ S+L   + +G + +G +IHARVIK+ L  +  V   L+ MY
Sbjct: 464 LFNEIED-QGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            +CG I+ A  +F  +   + + W +II+    HG   +AL  F +ML+EGVRP+ +T++
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYI 582

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           ++L+ACSH GLV+EG ++F  M  E G+ P ++HY CMVD+ GR+G L  A  FI +MP 
Sbjct: 583 AVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPY 642

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
           + DA +W   LGACR+HGN+ELG  A+  + E +  +   Y+L+SN+YA+  KW+ V  +
Sbjct: 643 KADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNI 702

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R   +++ L K  G S +EV NKV  FY G+ +HPK  +IYDEL+NL+ K+K LGYVP+ 
Sbjct: 703 RKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNL 762

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
            FVL DVEE++KE +L  HSE++A+AFG+IS+    PI++FKNLR+CGDCH+  K+IS  
Sbjct: 763 DFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMA 822

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T REIIVRD+NRFHH KDG CSC +YW
Sbjct: 823 TGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 195/390 (50%), Gaps = 16/390 (4%)

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   +A+  L+ M  +G   D  T +  L  C R+ +   G L+H  + +  L+ +   
Sbjct: 44  NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103

Query: 282 SNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            N+LI++Y+K G    A  +F  M   RD++SW+++++ +  +N    A   F  M + G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK-LGIINS 399
             P+     + T   +         S+ GF+++ G+   DV +G  ++DM+ K  G + S
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  VFE +P ++ ++W  +IT   Q G A EAI++F  M   +   P++ T   ++ A +
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM-ILSGYEPDRFTLSGVISACA 282

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLFYQVPRSSSVP 516
           ++  L  G ++H++ I++ L  D  V  CL++MY KC   G +  A  +F Q+   +   
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342

Query: 517 WNAIISCHGIHGQGD-KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           W A+I+ +   G  D +AL+ FR M+   V P+H TF S L AC++   +  G++ F   
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF--- 399

Query: 576 QEEFGIKPHLKHYGC----MVDLFGRAGHL 601
                +K       C    ++ ++ R+G +
Sbjct: 400 --THAVKLGFSSVNCVANSLISMYARSGRI 427



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 148/308 (48%), Gaps = 15/308 (4%)

Query: 71  VVSGKIKTVFSSTK-----LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           V +  +K  FSS       L++ YA  G +  +R  FD +  +N+ ++N++I  Y +   
Sbjct: 398 VFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLN 457

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAA 182
             EA++ F +     G+    +TF  +L    +   +  G++IH  V+K G + +  V  
Sbjct: 458 SEEALELFNEIE-DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+ MY R G    A ++F+DM  R+  SW ++I+G+ + G A +AL++  +M  EGV  
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576

Query: 243 DPITVASILPVCARSDNILSGL--LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           + +T  ++L  C+    +  G      +Y  +HG+   +     ++++  + G +  A++
Sbjct: 577 NLVTYIAVLSACSHVGLVNEGWKHFKSMY-TEHGVIPRMEHYACMVDILGRSGSLSEAIQ 635

Query: 301 VFDQM-MERDVVSWNSIIAAYE-QSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQ 357
             + M  + D + W + + A     N  +  H     ++Q    P    L+S L +  ++
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSK 695

Query: 358 LNDCRNSR 365
            ++  N R
Sbjct: 696 WDEVSNIR 703


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 297/805 (36%), Positives = 464/805 (57%), Gaps = 41/805 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHI-SYRN 109
            ++C  +  +K  H  L   G    V + TKLV     LG    LSF++  F++  SY  
Sbjct: 39  LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
            + +NS+I  Y   G  +EA+  F +  + SG+ PD YTFP  L AC   R   +G +IH
Sbjct: 99  CFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             ++K+G+  D+FV  SL+H Y   G  + ARK+FD+M  R+  SW +MI GY +   A 
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217

Query: 227 EALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           +A+D+   M R E V+ + +T+  ++  CA+ +++ +G  ++ +I   G+E N  + + L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K   +  A R+FD+    ++   N++ + Y +      A G F  M  +G++PD 
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL----------- 394
           ++++S  S  +QL +    +S HG+++R G+   D I  NA++DMY K            
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFD 396

Query: 395 --------------------GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                               G +++A   FE +P K+++SWNT+I+G  Q  L  EAIEV
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F  M+    +N +  T +SI  A  H+GAL     I+  + KN +  DV + T LVDM+ 
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           +CG  + AMS+F  +       W A I    + G  ++A+  F  M+++G++PD + FV 
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
            LTACSH GLV +G+  F+ M +  G+ P   HYGCMVDL GRAG L  A   I++MP+ 
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P+  IW +LL ACR+ GN+E+ A A++++  +  E  G YVL+SN+YA+ G+W  + +VR
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
              +++GL+K PG SSI++  K   F +G+ +HP+   I   L  ++ +   LG+VPD S
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
            VL DV+E EK  +L+ HSE+LA+A+G+ISS   + I+I KNLRVC DCH++ KF S++ 
Sbjct: 757 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 816

Query: 795 EREIIVRDSNRFHHFKDGICSCGDY 819
            REII+RD+NRFH+ + G CSCGD+
Sbjct: 817 NREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 246/508 (48%), Gaps = 41/508 (8%)

Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDMPV 206
           P  LK C+ + + K  H S+ K G + DV     L+   C  G     + A+++F++   
Sbjct: 36  PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95

Query: 207 RDSG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
             +   +N++I GY  SG   EA+ +   M   G+S D  T    L  CA+S    +G+ 
Sbjct: 96  YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  IVK G   +LFV N+L++ YA+ G +  A +VFD+M ER+VVSW S+I  Y + + 
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215

Query: 326 PITAHG-FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
              A   FF  ++   + P+ +T+V + S  A+L D      V+ FI   G  + D+++ 
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV- 274

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           +A+VDMY K   I+ A  +F+     ++   N + + Y + GL  EA+ VF +M +   +
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-V 333

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P++ + +S + + S +  +  G   H  V++N       +   L+DMY KC R D A  
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD---------------------- 542
           +F ++   + V WN+I++ +  +G+ D A   F  M +                      
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453

Query: 543 ----------EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
                     EGV  D +T +S+ +AC H G +   +  ++ + E+ GI+  ++    +V
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLV 512

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           D+F R G    A +   ++  R D S W
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNR-DVSAW 539



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 205/454 (45%), Gaps = 52/454 (11%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C KL  ++   +++A +  SG        + LV+ Y     +  ++  FD     N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +   N+M S YVR G   EA+  F    + SG+RPD  +    + +C   RN++ GK  H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360

Query: 167 CSVLKLGFE-WD------------------------------VFVAASLLHMYCRFGLAN 195
             VL+ GFE WD                              V    S++  Y   G  +
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVC 254
            A + F+ MP ++  SWN +ISG  Q     EA+++   M+  EGV+ D +T+ SI   C
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
                +     I+ YI K+G++ ++ +   L++M+++ G    A+ +F+ +  RDV +W 
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFIMR 373
           + I A   + +   A   F  M + G++PD +  V   +  +     +  + + +  +  
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITGYAQNG---LA 428
            G   EDV  G  +VD+  + G++  A  + E +P++  DVI WN+L+      G   +A
Sbjct: 601 HGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA 658

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           + A E  Q++          G+YV +   Y+  G
Sbjct: 659 AYAAEKIQVLAP-----ERTGSYVLLSNVYASAG 687


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 299/867 (34%), Positives = 469/867 (54%), Gaps = 84/867 (9%)

Query: 37  SPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFS--------------- 81
           S +C   +     F  L + C  ++ V+++H  ++  G +    S               
Sbjct: 21  SAECTGRDVSPTHFASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYV 80

Query: 82  -----STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
                 T +V  Y   G  S +    + +       WN ++  ++  GRL  A+    + 
Sbjct: 81  SPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRM 140

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            L +G +PD +T P  LKAC  L     G   H  +   GFE +VFV  +L+ MY R G 
Sbjct: 141 -LRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGS 199

Query: 194 ANVARKLFDDMP---VRDSGSWNAMISGYCQSGNAVEALDILDEM------RLEGVSMDP 244
              A  +FD++    + D  SWN++++ + +  N   ALD+  EM      +      D 
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           I++ +ILP CA    +     IH Y +++G   + FV N LI+ YAK G M+ A+ VF+ 
Sbjct: 260 ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI----------------------- 341
           M  +DVVSWN+++  Y QS     A   F  M++  I                       
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379

Query: 342 ------------QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF-----------M 378
                       +P+ +T++SL S  A L         H + +++               
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD--VISWNTLITGYAQNGLASEAIEVF- 435
           ED+++ NA++DMY+K     +A  +F  +P ++  V++W  +I GYAQ G +++A+++F 
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFS 499

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN--CLCFDVFVATCLVDMY 493
           +M+ +   + PN  T   IL A +H+ +LR G +IHA V ++        FVA CL+DMY
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMY 559

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG +D A ++F  +P+ + V W +++S +G+HG+G +AL+ F +M   G  PD I+F+
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            LL ACSHSG+V +G  YF +M+ ++G+    +HY C++DL  R+G L  A   IQ MP+
Sbjct: 620 VLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPM 679

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P A+IW ALL ACR+H N+EL   A ++L  + +EN G Y L+SNIYA   +W+ V  +
Sbjct: 680 EPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARI 739

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R L +  G+KK PG S ++       F+ G+R+HP   +IY  L  L  ++K +GYVP+ 
Sbjct: 740 RQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPET 799

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
           +F L DV+++EK ++LT HSE+LA+A+G++++ P  PI+I KNLRVCGDCH+   +IS+I
Sbjct: 800 NFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKI 859

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            + EIIVRDS+RFHHFK+G CSCG YW
Sbjct: 860 VDHEIIVRDSSRFHHFKNGSCSCGGYW 886


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 275/657 (41%), Positives = 398/657 (60%), Gaps = 3/657 (0%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           KIH  ++  G        A L+  Y R G    AR++FD  P     +WNAMI  Y + G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EAL +   M  EGV  D  T   +L  C RS ++ SG       V  G   ++FV  
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            ++N+YAK G M  A+RVFD+M  RD+V W ++I    Q+     A   +  M +  ++ 
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + ++ L      L   +   S+HG+++R+   M DVI+  ++VDMYAK G +  A  V
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIM-DVIVQTSLVDMYAKNGHLELASCV 263

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +  K+VISW+ LI+G+AQNG A  A+++   M+      P+  + VS+L A S VG 
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFG-YKPDSVSLVSVLLACSQVGF 322

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L+ G  +H  +++  L FD   +T ++DMY KCG +  A ++F Q+    S+ WNAII+ 
Sbjct: 323 LKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIAS 381

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +GIHG G++AL+ F QM +  V+PDH TF SLL+A SHSGLV +G+ +F +M  E+ I+P
Sbjct: 382 YGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQP 441

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
             KHY CMVDL  RAG +  A   I++M   P  +IW ALL  C  HG   +G +A+ ++
Sbjct: 442 SEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKV 501

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++ ++ G Y L+SN +A   +W+ V EVR + +  G+KK PG+S +EVN K+  F   
Sbjct: 502 LELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLME 561

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +++H +YE+I   L  L  +MK++GYVP   FVL ++EE+ KE +L +HSERLAIAFG++
Sbjct: 562 DKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLL 621

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ P + + I KNLRVCGDCH  TKFIS+I  REI+VRD  RFHHFKDG+CSCGDYW
Sbjct: 622 NTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 260/476 (54%), Gaps = 17/476 (3%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           + ++HAL++++G      S+ KL+  YA LG +  +R  FD      V  WN+MI  Y R
Sbjct: 23  IAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSR 82

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
            G + EA+  +++   + G+RPD  T+  VLKAC   +D   G++     +  G+  DVF
Sbjct: 83  RGAMFEALSLYHRMA-SEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVF 141

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V A++L++Y + G  + A ++FD M  RD   W  MI+G  Q+G A EA+DI  +M  + 
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V  D + +  ++  C    +   GL IH Y+++  +  ++ V  +L++MYAK G +  A 
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELAS 261

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            VF +M+ ++V+SW+++I+ + Q+     A      MQ  G +PD ++LVS+    +Q+ 
Sbjct: 262 CVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
             +  +SVHG+I+RR  F  D +   AV+DMY+K G ++ A  VF+ +  +D ISWN +I
Sbjct: 322 FLKLGKSVHGYIVRRLHF--DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAII 379

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG-----IKIHARV 474
             Y  +G   EA+ +F  M E N + P+  T+ S+L A+SH G + +G     I ++   
Sbjct: 380 ASYGIHGSGEEALSLFLQMRETN-VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYK 438

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
           I+           C+VD+  + GR+++A  L   +     +  W A++S    HG+
Sbjct: 439 IQPSEKH----YACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGK 490


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 299/809 (36%), Positives = 448/809 (55%), Gaps = 77/809 (9%)

Query: 77   KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
            + V S   +++ Y   GDL  +R  FD +  +NV +WNS+++ Y  C R+SEA + F Q 
Sbjct: 262  RNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM 321

Query: 137  ---------TLTSGL---------------------RPDFYTFPPVLKACRNLVDGKKI- 165
                      + SG                      RPD   F  VL A   L D + I 
Sbjct: 322  PERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIG 381

Query: 166  --HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
                  +K G+E DV V +++L+ Y R G  ++A   F+ MP R+  SW  MI+ + Q G
Sbjct: 382  SLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCG 441

Query: 224  NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               +A+ + + +  + V+    T  +++   A+   I    LI   I    L  N+   N
Sbjct: 442  RLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEI----LNPNVVAWN 493

Query: 284  NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             +I  Y + GM++ A  +F +M  ++  SW ++IA + Q+ +   A      + ++G  P
Sbjct: 494  AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVP 553

Query: 344  DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
               +  S  S  A + D    R +H   ++ G      ++ N ++ MYAK G +     V
Sbjct: 554  SDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVM-NGLISMYAKCGNVEDGSHV 612

Query: 404  FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE----------------------- 440
            F  + VKD +SWN+LI+G ++N +  +A  VF+ M +                       
Sbjct: 613  FRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVAL 672

Query: 441  -------CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVD 491
                      I PNQ T  S+L A  ++GA++ G + HA + K  L FD  +FV   L+ 
Sbjct: 673  DLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFK--LGFDTFLFVGNSLIT 730

Query: 492  MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
            MY KCG  +D   +F ++P    + WNA++     +G G +A+  F QM  EG+ PD ++
Sbjct: 731  MYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMS 789

Query: 552  FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
            F+ +L ACSH+GLV EG  +F+ M +++GI P + HY CMVDL GRAG+L  A   I+NM
Sbjct: 790  FLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENM 849

Query: 612  PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
            PV+PD+ IW ALLGACRIH N+ELG   ++RLF++       YVL+SN++A+ G W+ V 
Sbjct: 850  PVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVA 909

Query: 672  EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            E+R L +D+GL K PG S I+V NK+  F TG+RTH + E+IY  L+      ++ GY+P
Sbjct: 910  EIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMP 969

Query: 732  DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
            D +FVL DVEE++K++ L  HSE+LA+ FGI+S+P  SPIQI KNLR+CGDCH + KF+S
Sbjct: 970  DTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMS 1029

Query: 792  QITEREIIVRDSNRFHHFKDGICSCGDYW 820
            ++T R+II+RD NRFHHF+DG CSCGDYW
Sbjct: 1030 KVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 270/559 (48%), Gaps = 57/559 (10%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L  +  L  + + +G    V   + ++N Y   G L  + H F+ +  RN Y+W +MI+ 
Sbjct: 377 LELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAA 436

Query: 120 YVRCGRLSEAVDCF----YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 175
           + +CGRL +A+  +     Q   T       Y     ++  R + D + ++ +V+     
Sbjct: 437 FAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFD-EILNPNVVA---- 491

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
           W+  +A      Y + G+   A+ LF  MPV++S SW AMI+G+ Q+  + EAL++L E+
Sbjct: 492 WNAIIAG-----YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIEL 546

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG-- 293
              G      +  S L  CA   ++  G +IH   +K G +FN +V N LI+MYAK G  
Sbjct: 547 HRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNV 606

Query: 294 -----------------------------MMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
                                        M+  A  VF++M +RDVVSW +II+AY Q+ 
Sbjct: 607 EDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAG 666

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F  M   GI+P+ LT+ SL S    L   +     H  I + G F   + +G
Sbjct: 667 HGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLG-FDTFLFVG 725

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N+++ MY K G  +  C VFE +P  D+I+WN ++ G AQNGL  EAI++F+ M E   I
Sbjct: 726 NSLITMYFKCGYEDGFC-VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQM-EVEGI 783

Query: 445 NPNQGTYVSILPAYSHVGALRQG-IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
            P+Q +++ +L A SH G + +G    ++   K  +   V+  TC+VD+ G+ G + +A 
Sbjct: 784 LPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAE 843

Query: 504 SLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           +L   +P +  SV W A++    IH     G +      QM     +P   T+V L    
Sbjct: 844 ALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQM----TKPKSATYVLLSNLF 899

Query: 560 SHSGLVSEGQRYFHMMQEE 578
           +  G+  +      +M+++
Sbjct: 900 ASQGMWDKVAEIRKLMKDQ 918



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 169/629 (26%), Positives = 286/629 (45%), Gaps = 65/629 (10%)

Query: 44  ESREIDFDDLFQSCTKLHHVKRL----HALLVVSGKI-KTVFSSTKLVNFYANLGDLSFS 98
           +++E     LFQ  T++  + RL     A  V +  I + V S   ++N Y+  G +  +
Sbjct: 162 KNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA 221

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT----LTSGLRPDFYTFPPVLK 154
           R  FD    +N+ TW  +++ Y + GR+ EA + F   T    ++       Y     LK
Sbjct: 222 RLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLK 281

Query: 155 ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
             R L D             E +V    S++  YC     + AR+LFD MP R+S SW  
Sbjct: 282 NARKLFDEMP----------EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMV 331

Query: 215 MISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           MISGY    +  EA D+  +M R        I V  +  +    D  L G L  + I K 
Sbjct: 332 MISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAI-KT 390

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G E ++ V + ++N Y + G +  A+  F+ M ER+  SW ++IAA+ Q      A   +
Sbjct: 391 GYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY 450

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             + +  +     T  ++ +  AQ+   + +R +   I+       +V+  NA++  Y +
Sbjct: 451 ERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILN-----PNVVAWNAIIAGYTQ 501

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G++  A  +F+ +PVK+  SW  +I G+ QN  + EA+E+   +     + P+  ++ S
Sbjct: 502 NGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV-PSDSSFTS 560

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI-------------- 499
            L A +++G +  G  IH+  IK    F+ +V   L+ MY KCG +              
Sbjct: 561 ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKD 620

Query: 500 -----------------DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
                            DDA  +F ++P+   V W AIIS +   G G+ AL+ F  ML 
Sbjct: 621 TVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLA 680

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G++P+ +T  SLL+AC + G +  G++ FH +  + G    L     ++ ++ + G+  
Sbjct: 681 RGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCGYED 739

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHG 631
                 + MP   D   W A+L  C  +G
Sbjct: 740 -GFCVFEEMP-EHDLITWNAVLVGCAQNG 766



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 21/313 (6%)

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           + +L     +R V   +++R     DV+  N++++ Y++ G ++ A  +F+    K++ +
Sbjct: 181 LGRLGRVEEARRVFNEMIQR-----DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRT 235

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W  L+TGYA+ G   EA EVF+ M E N ++ N     +++  Y   G L+   K+   +
Sbjct: 236 WTILLTGYAKEGRIEEAREVFESMTERNVVSWN-----AMISGYVQNGDLKNARKLFDEM 290

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            +     +V     +V  Y  C R+ +A  LF Q+P  +SV W  +IS +       +A 
Sbjct: 291 PEK----NVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAW 346

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVS-EGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           + F +M     RPD   FV +L+A   +GL   E       +  + G +  +     +++
Sbjct: 347 DVFVKMCRTVARPDQSIFVVVLSAI--TGLDDLELIGSLRPIAIKTGYEGDVVVGSAILN 404

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
            + R G L +A +F + MP R + S W  ++ A    G ++      +R   V  + V  
Sbjct: 405 AYTRNGSLDLAMHFFETMPERNEYS-WTTMIAAFAQCGRLDDAIQLYER---VPEQTVAT 460

Query: 654 YVLMSNIYANVGK 666
              M   YA VG+
Sbjct: 461 KTAMMTAYAQVGR 473


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 303/784 (38%), Positives = 438/784 (55%), Gaps = 87/784 (11%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           L+N YA  G    + + F  +  ++V +W++MI+ Y      +EA++ F++  +     P
Sbjct: 212 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEM-IEKRFEP 270

Query: 145 DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           +  T    L+AC   RNL +GKKIH   +     W                         
Sbjct: 271 NSVTVVSALQACAVSRNLEEGKKIHKIAV-----W------------------------- 300

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
                +D  SW A++SGY Q+G A +++ +   M  +G+  D + V  IL   +      
Sbjct: 301 -----KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 355

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY- 320
             L +H Y+V+ G   N+FV  +LI +Y+K G +  A+++F  M+ RDVV W+S+IAAY 
Sbjct: 356 QALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYG 415

Query: 321 ---------EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
                    E  +  I      T+  Q  +QP +   +++TS     +       V  F 
Sbjct: 416 IHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHI---PWKVKAFY 472

Query: 372 MRR-----GWFME------------------------DVIIGNAVVDMYAKLGIINSACA 402
           MR      G F E                        D  I      MY     I++A  
Sbjct: 473 MRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASI 532

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEEC-----NEINPNQGTYVSILP 456
           VFE +P      WN +I G+A +G    ++E++ +MME+      + + PN+ + +S+L 
Sbjct: 533 VFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLL 592

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A  ++GALR+G   H+ VI+    FD+ VAT ++DMY KCG +D A  LF +      V 
Sbjct: 593 ACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVC 652

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W+A+I+ +GIHG G KA++ F QM+  GVRP H+TF  +L+ACSHSGL+ EG+ YF +M 
Sbjct: 653 WSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMT 712

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           EEF I   L +Y CMVDL GRAG L  A + I+NMPV PDASIWG+LLGACRIH N++L 
Sbjct: 713 EEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 772

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
              +D LF +D  + GY+VL+SNIYA   +W  V++VR +   RG  K  G+S +E +N+
Sbjct: 773 EKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQ 832

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F  G+R+HP++EK+Y +L  L A MK LGYVP   FVL D+EE+ KE  L+ HSERL
Sbjct: 833 VHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERL 892

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           AIAFG+I++ P + ++I KNLR+CGDCHN  K IS+I  R I+VRD +RFH F+DG+CSC
Sbjct: 893 AIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSC 952

Query: 817 GDYW 820
           GDYW
Sbjct: 953 GDYW 956



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 180/688 (26%), Positives = 306/688 (44%), Gaps = 125/688 (18%)

Query: 45  SREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           SR++   DLFQ+C     V +LH+ +  +G +   F +TKL + YA    L  +R  FD 
Sbjct: 3   SRQV-LVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDE 61

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
             + NV+ WNS +  Y R  +  E +  F+    T+G  PD +T P  LKAC   R L  
Sbjct: 62  TPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLEL 121

Query: 162 GKKIHCSVLK---LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           GK IH    K   +G   D+FV ++L+ +Y + G    A K+F++    D+  W +M++G
Sbjct: 122 GKVIHGFAKKNDEIGS--DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE-- 276
           Y Q+ +  EAL +  +M    V MD          C   D  L   L++LY  K G E  
Sbjct: 180 YQQNNDPEEALALFSQM----VMMD----------CFDGDLPLVNSLLNLY-AKTGCEKI 224

Query: 277 -FNLFVS---------NNLINMYAKFGMMRHALRVFDQMME------------------- 307
             NLF           + +I  YA       AL +F +M+E                   
Sbjct: 225 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 284

Query: 308 ----------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
                           +DVVSW ++++ Y Q+     + G F  M   GIQPD + +V +
Sbjct: 285 SRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKI 344

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            +  ++L   + +  +HG+++R G F  +V +G +++++Y+K G +  A  +F+G+ V+D
Sbjct: 345 LAASSELGIFQQALCLHGYVVRSG-FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRD 403

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMM-------EECNEINPNQ---------------- 448
           V+ W+++I  Y  +G   EA+E+F  M         C +I+                   
Sbjct: 404 VVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATH 463

Query: 449 -----------------GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
                            G +  I P Y    A      I A  ++    +D  + T    
Sbjct: 464 IPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQ----YDSRILTKFAI 519

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH-- 549
           MY    RID A  +F  +P   S  WN +I      G+   +L  + +M+++G++PD+  
Sbjct: 520 MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSG 579

Query: 550 -----ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
                ++ +S+L AC + G + +G+ +FH    + G +  +     ++D++ + G L +A
Sbjct: 580 VIPNRVSILSVLLACGNLGALRKGE-WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA 638

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGN 632
                    + D   W A++ +  IHG+
Sbjct: 639 RCLFDETAGK-DLVCWSAMIASYGIHGH 665



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 24/310 (7%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           TK    Y +   +  +   F+ I     + WN MI  +   GR   +++  Y   +  GL
Sbjct: 515 TKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLE-LYSKMMEKGL 573

Query: 143 RPDFYTFPP-------VLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           +PD     P       VL AC NL     G+  H  V++ GFE+D+ VA +++ MY + G
Sbjct: 574 KPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 633

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             ++AR LFD+   +D   W+AMI+ Y   G+  +A+D+ D+M   GV    +T   +L 
Sbjct: 634 SLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 693

Query: 253 VCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            C+ S  +  G +   L   +  +   L     ++++  + G +  A+ + + M +E D 
Sbjct: 694 ACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDA 753

Query: 311 VSWNSIIAAYEQSN-----DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
             W S++ A    N     + I  H F      AG        V L++I A  +      
Sbjct: 754 SIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYH------VLLSNIYAAKSRWNEVE 807

Query: 366 SVHGFIMRRG 375
            V   + RRG
Sbjct: 808 KVRKMMARRG 817



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 23/203 (11%)

Query: 56  SCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           +C  L  +++    H+ ++ +G    +  +T +++ Y+  G L  +R  FD  + +++  
Sbjct: 593 ACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVC 652

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVL 170
           W++MI+ Y   G   +A+D F Q  + +G+RP   TF  VL AC +  L++  K++  ++
Sbjct: 653 WSAMIASYGIHGHGRKAIDLFDQM-VKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLM 711

Query: 171 KLGFEWDVFVAASLLHMYC-------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQS 222
                 + FV A  L  Y        R G  + A  L ++MPV  D+  W +++ G C+ 
Sbjct: 712 T-----EEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL-GACRI 765

Query: 223 GNAVEALDILDEMRLEGVSMDPI 245
            N    LD+ +++      +DP+
Sbjct: 766 HN---NLDLAEKIADHLFHLDPV 785


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/721 (38%), Positives = 435/721 (60%), Gaps = 17/721 (2%)

Query: 109  NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF--YTFPPVLKACRNLVD---GK 163
            +V+ WN  +S  +  G    A++CF      +GL  D+   T   VL A     D   GK
Sbjct: 868  DVFCWNKKLSECLWAGDNWGAIECFVNM---NGLNIDYDAVTLLVVLAAVAGTDDLELGK 924

Query: 164  KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            ++H   +K G + DV VA SL++MY + G A  AR++F+DM   D  SWN+MIS   QS 
Sbjct: 925  QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSS 984

Query: 224  NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL----LIHLYIVKHGLEFNL 279
               E++++  ++  EG+  D  T+AS+L  C+   +++ GL     IH++ +K G   + 
Sbjct: 985  LEEESVNLFIDLLHEGLKPDHFTLASVLRACS---SLIDGLNISRQIHVHALKTGNIADS 1041

Query: 280  FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            FV+  LI++Y+K G M  A  +F    + D+  WN+++  Y   ND   A   F+ + ++
Sbjct: 1042 FVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKS 1101

Query: 340  GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            G + D +TL +       L      + +H   ++ G F  D+ + + ++DMY K G + +
Sbjct: 1102 GEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG-FDSDLHVNSGILDMYIKCGDMVN 1160

Query: 400  ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
            A  VF  +   D ++W ++I+G   NG   +A+ ++  M + + + P++ T+ +++ A S
Sbjct: 1161 AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ-SRVMPDEYTFATLIKASS 1219

Query: 460  HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
             V AL QG ++HA VIK     D FV T LVDMY KCG I+DA  LF ++   +   WNA
Sbjct: 1220 CVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNA 1279

Query: 520  IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
            ++     HG  ++A+N F+ M   G+ PD ++F+ +L+ACSH+GL SE   Y H M  ++
Sbjct: 1280 MLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDY 1339

Query: 580  GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            GI+P ++HY C+VD  GRAG +  A   I+ MP +  ASI  ALLGACRI G++E G   
Sbjct: 1340 GIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRV 1399

Query: 640  SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
            + RLF ++  +   YVL+SNIYA   +W+ V + R + + + +KK PG+S I+V N + +
Sbjct: 1400 AARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHL 1459

Query: 700  FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
            F   +R+HP+ + IYD++  +   ++  GYVPD  FVL DVE++EKE  L  HSE+LAIA
Sbjct: 1460 FVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIA 1519

Query: 760  FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
            +G+IS+P  + I++ KNLRVCGDCHN  K+IS++ EREI++RD+NRFHHF+DG+CSCGDY
Sbjct: 1520 YGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDY 1579

Query: 820  W 820
            W
Sbjct: 1580 W 1580



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 245/471 (52%), Gaps = 9/471 (1%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            K++H + V SG    V  +  LVN Y+ +G   F+R  F+ + + ++ +WNSMIS   + 
Sbjct: 924  KQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQS 983

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVF 179
                E+V+ F    L  GL+PD +T   VL+AC +L+DG    ++IH   LK G   D F
Sbjct: 984  SLEEESVNLFIDL-LHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSF 1042

Query: 180  VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
            VA +L+ +Y + G    A  LF +    D   WNAM+ GY    +  +AL++   +   G
Sbjct: 1043 VATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSG 1102

Query: 240  VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
               D IT+A+    C     +  G  IH + +K G + +L V++ +++MY K G M +A 
Sbjct: 1103 EKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 1162

Query: 300  RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
             VF+ +   D V+W S+I+    + +   A   +  M+Q+ + PD  T  +L    + + 
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222

Query: 360  DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                 R +H  +++    + D  +G ++VDMYAK G I  A  +F+ + V+++  WN ++
Sbjct: 1223 ALEQGRQLHANVIKLD-CVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAML 1281

Query: 420  TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNC 478
             G AQ+G A EA+ +F+ M + + I P++ +++ IL A SH G   +  + +H+      
Sbjct: 1282 VGLAQHGNAEEAVNLFKSM-KSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYG 1340

Query: 479  LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN-AIISCHGIHG 528
            +  ++   +CLVD  G+ G + +A  +   +P  +S   N A++    I G
Sbjct: 1341 IEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQG 1391



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 173/599 (28%), Positives = 275/599 (45%), Gaps = 56/599 (9%)

Query: 53   LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
            L ++    H++   K  HA +VVSG     F S  L+  Y+  G LS +R  FD    R+
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 110  VYTWNSMISVYVRC-----GRLSEAVDCF--YQFTLTSGLRPDFYTFPPVLKACRN---L 159
            + TWN+++  Y        G   E +  F   + +L S  R    T  PVLK C N   L
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTR---MTLAPVLKLCLNSGCL 743

Query: 160  VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
               + +H   +K+G EWDVFV+ +L+++Y + G    AR LFD M  RD   WN M+ GY
Sbjct: 744  WAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGY 803

Query: 220  CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
             Q G   EA  +  E    G+  D  +V  IL   +   N   G  +   +  +  + +L
Sbjct: 804  VQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLSL 862

Query: 280  FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
               N                         DV  WN  ++    + D   A   F  M   
Sbjct: 863  SDDN------------------------PDVFCWNKKLSECLWAGDNWGAIECFVNMNGL 898

Query: 340  GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
             I  D +TL+ + + VA  +D    + VHG  ++ G    DV + N++V+MY+K+G    
Sbjct: 899  NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSG-LDSDVSVANSLVNMYSKMGCAYF 957

Query: 400  ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAY 458
            A  VF  +   D+ISWN++I+  AQ+ L  E++ +F  ++ E   + P+  T  S+L A 
Sbjct: 958  AREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG--LKPDHFTLASVLRAC 1015

Query: 459  SH-VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S  +  L    +IH   +K     D FVAT L+D+Y K G++++A  LF          W
Sbjct: 1016 SSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACW 1075

Query: 518  NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQ 576
            NA++  + I   G KAL  F  +   G + D IT  +   AC    L+ +G++ + H ++
Sbjct: 1076 NAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIK 1135

Query: 577  EEFGIKPHLKHYGCMVDLFGRAGHL---GMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
              F    H+     ++D++ + G +   G+  N+I      PD   W +++  C  +GN
Sbjct: 1136 AGFDSDLHVN--SGILDMYIKCGDMVNAGIVFNYIS----APDDVAWTSMISGCVDNGN 1188



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 6/177 (3%)

Query: 56   SC-TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
            SC T L   ++LHA ++    +   F  T LV+ YA  G++  +   F  ++ RN+  WN
Sbjct: 1219 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWN 1278

Query: 115  SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVL 170
            +M+    + G   EAV+ F     + G+ PD  +F  +L AC +     +    +H    
Sbjct: 1279 AMLVGLAQHGNAEEAVNLFKSMK-SHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 1337

Query: 171  KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
              G E ++   + L+    R GL   A K+ + MP + S S N  + G C+    VE
Sbjct: 1338 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 1394


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/658 (40%), Positives = 410/658 (62%), Gaps = 5/658 (0%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +I+  +L  G ++  F+ A L++     G  + ARKLFD  P  D   WNA++  Y + G
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               A+++   M++  VS D  +   +L  C+    +  G  +H  I +HG E ++FV N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+ +YAK G +  A  VF ++++R +VSW SII+ Y Q+  PI A   F+ M++  ++P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACA 402
           D + LVS+      + D  + +S+HG +++ G   E D++I  ++  +YAK G +  A  
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLI--SLTSLYAKCGHVMVARL 330

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F  +    +I WN +I+GY +NG A EAIE+F++M+  N I P+  T  S + A + +G
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKN-IRPDSITVTSSIAACAQIG 389

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           +L     +   +  +    DV V T L+D Y KCG +D A  +F ++P    V W+A++ 
Sbjct: 390 SLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+HGQG +++  F  M   GV P+ +TFV LLTAC +SGLV EG   FH M++ +GI+
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIE 508

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+VDL GRAGHL  A+NF+ NMP+ P  S+WGALL AC+IH ++ LG  A++R
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAER 568

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LF +D  N G+YV +SN+YA+   W+ V +VR L R++GL K  G+S IE+N K+  F  
Sbjct: 569 LFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQA 628

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G++THP+ ++I++E+ +L  ++K  G+VP    VL D+  +E E  L +HSERLAIA+G+
Sbjct: 629 GDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGL 688

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+PP + ++I KNLR C +CH   K IS++  REI+VRD+ RFHHFKDG CSCGDYW
Sbjct: 689 ISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 258/496 (52%), Gaps = 12/496 (2%)

Query: 39  DCLENESREIDF-DDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           DC E+  +   F   L        H+ +++A L+V+G     F   KLVN  +N+G++S 
Sbjct: 66  DCNESTFKPDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSC 125

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           +R  FD     +V+ WN+++  Y R G    A++ + +  +   + PD ++FP VLKAC 
Sbjct: 126 ARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC-VSPDGFSFPCVLKACS 184

Query: 158 NLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
            L     G+++H  + + GFE DVFV   L+ +Y + G    A  +F  +  R   SW +
Sbjct: 185 ALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTS 244

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +ISGY Q+G  +EAL I  EMR   V  D I + S+L      +++  G  IH  ++K G
Sbjct: 245 IISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMG 304

Query: 275 L--EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
           L  EF+L +S  L ++YAK G +  A   F+Q+    ++ WN++I+ Y ++     A   
Sbjct: 305 LECEFDLLIS--LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIEL 362

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  M+   I+PD +T+ S  +  AQ+     +R +  +I     F  DVI+  +++D YA
Sbjct: 363 FRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYI-SMSEFRNDVIVNTSLIDTYA 421

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G ++ A  VF+ +P KDV+ W+ ++ GY  +G   E+I +F  M +   ++PN  T+V
Sbjct: 422 KCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAG-VSPNDVTFV 480

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
            +L A  + G + +G  +  R+    +        C+VD+ G+ G +D A +    +P  
Sbjct: 481 GLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIE 540

Query: 513 SSVP-WNAIISCHGIH 527
             V  W A++S   IH
Sbjct: 541 PGVSVWGALLSACKIH 556


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 287/772 (37%), Positives = 448/772 (58%), Gaps = 32/772 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H   + SG ++ V   T LV+ Y    D    R  FD +  +NV +W S++S Y R 
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARN 183

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   E +    Q  +  G+ P+ +TF  VL A  +   +  G ++H  ++K GFE+  FV
Sbjct: 184 GLNDEVIHLINQMQM-EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY +  +   A  +FD M VRDS +WN MI GY   G  +E   +   MRL GV
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +      + L +C++   +     +H  +VK+G EF   +   L+  Y+K   +  A +
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362

Query: 301 VFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL-----TSI 354
           +F       +VV+W ++I  + Q+N+   A   F  M + G++P+  T  ++     +S+
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL 422

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           ++QL         H  I++  ++ +   +  A++D Y K G +  +  VF  +P KD+++
Sbjct: 423 LSQL---------HAQIIK-AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVA 472

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHA 472
           W+ ++TG AQ   + +A+EVF Q+++E   + PN+ T+ S++ A S   A +  G +IHA
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEG--VKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 473 RVIK----NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
             +K    N LC    V++ L+ MY K G I+ A  +F +      V WN++I+ +G HG
Sbjct: 531 TAVKSGKSNALC----VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
              KAL  F+ M ++G+  D +TF+ +LTAC+H+GLV EG++YF++M +++ I   ++HY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHY 646

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL+ RAG    A + I  MP     +IW  LL ACR+H N+ELG +A+++L  +  
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            +   YVL+SNI+A  G WE    VR L  +R +KK  G S IE+ N++  F  G+ +HP
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
             + +Y +L  L+ K+K +GY PD ++V  DVEE+ KE IL+ HSERLAIA+G+I+ PP 
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +PIQI KNLR+CGDCHN  + IS I ER +IVRDSNRFHHFK G+CSCG YW
Sbjct: 827 APIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 270/542 (49%), Gaps = 16/542 (2%)

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
           ++   FD    +++  +N ++  + R     EA+  F     +SGL  D  T    LK C
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLH-SSGLGVDGLTLSCALKVC 114

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L D   G+++HC  LK GF  DV V  SL+ MY +       R +FD+M +++  SW 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           +++SGY ++G   E + ++++M++EGV+ +  T A++L   A    I  G+ +H  IVK+
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G EF  FV N LI MY K  M+  A  VFD M+ RD V+WN +I  Y      +     F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYA 392
             M+ AG++       +   + +Q  +   ++ +H  +++ G+ F +D  I  A++  Y+
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD--IRTALMVTYS 352

Query: 393 KLGIINSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGT 450
           K   ++ A  +F       +V++W  +I G+ QN    +A+++F QM  E   + PN  T
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREG--VRPNHFT 410

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y ++L A      L Q   +HA++IK        VAT L+D Y K G + ++  +FY +P
Sbjct: 411 YSTVL-AGKPSSLLSQ---LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
               V W+A+++        +KA+  F Q++ EGV+P+  TF S++ ACS S    E  +
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
             H    + G    L     ++ ++ + G++  A         R D   W +++     H
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEER-DIVSWNSMITGYGQH 585

Query: 631 GN 632
           G+
Sbjct: 586 GD 587



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%)

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           R+A ++FD+   +D+  +N ++  + ++N    A   F  +  +G+  D LTL     + 
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
             L D    R VH   ++ G F+EDV +G ++VDMY K         +F+ + +K+V+SW
Sbjct: 115 GVLFDQVVGRQVHCQSLKSG-FLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            +L++GYA+NGL  E I +   M +   +NPN  T+ ++L A +    +  G+++HA ++
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIV 232

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           KN   F  FV   L+ MY K   + DA ++F  +    SV WN +I  +   G   +   
Sbjct: 233 KNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQ 292

Query: 536 FFRQMLDEGVRPDHITFVSLLTACS-----------HSGLVSEGQRY 571
            F +M   GV+     F + L  CS           H G+V  G  +
Sbjct: 293 MFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 47  EIDFDDLFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           E  F  +  +C+     + H K++HA  V SGK   +  S+ L+  Y+  G++  +   F
Sbjct: 505 EYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVF 564

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LV 160
                R++ +WNSMI+ Y + G   +A++ F Q     GL  D  TF  VL AC +  LV
Sbjct: 565 TRQEERDIVSWNSMITGYGQHGDAKKALEVF-QIMQNQGLPLDDVTFIGVLTACTHAGLV 623

Query: 161 DGKKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
           +  + + +++   +  D  +   + ++ +Y R G+ + A  + + MP   S + W  +++
Sbjct: 624 EEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLA 683

Query: 218 G 218
            
Sbjct: 684 A 684


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 279/747 (37%), Positives = 434/747 (58%), Gaps = 19/747 (2%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           + LVN Y     L  +R   + +  ++V  WN  +S       L EAV  FY    T  +
Sbjct: 28  SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTR-I 86

Query: 143 RPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           R + + F  ++ A  +L D   G+ IH  V K GFE D+ ++ + + MY +        +
Sbjct: 87  RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQ 146

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
            F  M + +  S N ++SG+C +    +   IL ++ +EG   +  T  SIL  CA   +
Sbjct: 147 FFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGD 206

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  IH  ++K G+  +  + N+L+N+YAK G   +A +VF ++ ERDVVSW ++I  
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITG 266

Query: 320 YEQSNDPITAHGF------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           +        A G+      F  M   G  P++ T +S+    + L+D    + VH  I++
Sbjct: 267 F-------VAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK 319

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
                 D  +G A+VDMYAK   +  A  +F  L  +D+ +W  ++ GYAQ+G   +A++
Sbjct: 320 NSLDGND-FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 378

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
            F  M+    + PN+ T  S L   S +  L  G ++H+  IK     D+FVA+ LVDMY
Sbjct: 379 CFIQMQR-EGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMY 437

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG ++DA  +F  +    +V WN II  +  HGQG KAL  F  MLDEG  PD +TF+
Sbjct: 438 AKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFI 497

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L+ACSH GL+ EG+++F+ + + +GI P ++HY CMVD+ GRAG      +FI+ M +
Sbjct: 498 GVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKL 557

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
             +  IW  +LGAC++HGN+E G  A+ +LFE++ E    Y+L+SN++A  G W+ V  V
Sbjct: 558 TSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNV 617

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R+L   RG+KK PG S +EVN +V +F + + +HPK  +I+ +L++L  K+ S+GY P+ 
Sbjct: 618 RALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNT 677

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
             VL +V + EK+ +L  HSERLA+AF ++S+  +  I+IFKNLR+CGDCH++ K IS+I
Sbjct: 678 DHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEI 737

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T +E++VRD N FHHFK+G CSC ++W
Sbjct: 738 TNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 7/220 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC+ L  V   K++HA +V +      F  T LV+ YA    L  +   F+ + 
Sbjct: 294 FISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI 353

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            R+++ W  +++ Y + G+  +AV CF Q     G++P+ +T    L  C  +     G+
Sbjct: 354 KRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQ-REGVKPNEFTLASSLSGCSRIATLDSGR 412

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K G   D+FVA++L+ MY + G    A  +FD +  RD+ SWN +I GY Q G
Sbjct: 413 QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHG 472

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
              +AL   + M  EG   D +T   +L  C+    I  G
Sbjct: 473 QGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 512



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++LH++ + +G+   +F ++ LV+ YA  G +  +   FD +  R+  +WN++I  Y + 
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKL 172
           G+  +A+  F +  L  G  PD  TF  VL AC ++    +GKK   S+ K+
Sbjct: 472 GQGGKALKAF-EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKI 522


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/770 (36%), Positives = 443/770 (57%), Gaps = 12/770 (1%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           C  L   K++HA     G +  +F  + LV+ YA  G++  +   F  +  +N  TWN +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
           ++ Y + G ++  +  F    +   ++ + +T   VLK C   +NL  G+ IH  ++K G
Sbjct: 286 LNGYAQRGDVTGVLKLFCSM-MELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           +E + F+   L+ MY + GLA  A  +F  +   D   W+A+I+   Q G + E++ +  
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            MRL     +  T+ S+L     + N+  G  IH  + K+G E ++ VSN L+ MY K G
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQS---NDPITAHGFFTTMQQAGIQPDLLTLVS 350
            +    ++++ M++RD++SWN+ ++        + P+T    F  M + G  P++ T +S
Sbjct: 465 CVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLT---IFYHMLEEGFIPNMYTFIS 521

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +    + L D    R VH  I++     ++  +  A++DMYAK   +  A   F  L V+
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQ-LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D+ +W  +IT YAQ     +A+  F+ M++   + PN+ T    L   S + +L  G ++
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQ-EGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H+ V K+    D+FV + LVDMY KCG +++A +LF  + R  ++ WN II  +  +GQG
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           +KAL  FR MLDEG+ PD +TF  +L+ACSH GLV EG+ +F+ M  +FGI P + H  C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVD+ GR G      +FIQ M +  +A IW  +LGA ++H N+ LG  A+++LFE+  E 
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              Y+L+SNI+A  G+W+ V  VRSL   +G+KK PG S +E N +V  F + + +HP+ 
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQI 879

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           ++I+ +L  L  ++ S+ YVP   +VL +V E EK+  L  HSERLA+ F +IS+  +  
Sbjct: 880 QEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKK 939

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+IFKNLR+C DCH+  K IS IT +EI+VRD  RFHHFK+G CSC D+W
Sbjct: 940 IRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 301/606 (49%), Gaps = 10/606 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           LVN YA     +++R     +  R+V +W ++I   V  G  ++++  F +     G+ P
Sbjct: 153 LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ-NEGIMP 211

Query: 145 DFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           + +T    LKAC     L  GK++H    KLG   D+FV ++L+ +Y + G   +A K+F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
             MP ++  +WN +++GY Q G+    L +   M    V  +  T+ ++L  CA S N+ 
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G +IH  I+K G E N F+   L++MY+K G+   A+ VF  + + D+V W+++I   +
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q      +   F  M+     P+  T+ SL S      + +  +S+H  + + G F  DV
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG-FETDV 450

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            + NA+V MY K G ++    ++E +  +D+ISWN  ++G    G+    + +F  M E 
Sbjct: 451 AVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE 510

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             I PN  T++SIL + S +  +  G ++HA +IKN L  + FV T L+DMY KC  ++D
Sbjct: 511 GFI-PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLED 569

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A   F ++       W  II+ +    QG+KALN+FRQM  EGV+P+  T    L+ CS 
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
              +  GQ+  H M  + G    +     +VD++ + G +  A    + + +R D   W 
Sbjct: 630 LASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWN 687

Query: 622 ALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
            ++     +G       A   + +  +  + V +  ++S         EG +   S+ RD
Sbjct: 688 TIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRD 747

Query: 680 RGLKKT 685
            G+  T
Sbjct: 748 FGISPT 753



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 219/417 (52%), Gaps = 9/417 (2%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +L+ C   R+L   K IH  ++K     D  +  SL+++Y +   +  AR +   MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            RD  SW A+I G    G A +++ +  EM+ EG+  +  T+A+ L  C+    +  G  
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H    K GL  +LFV + L+++YAK G +  A ++F  M E++ V+WN ++  Y Q  D
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
                  F +M +  ++ +  TL ++    A   + +  + +H  I++ G +  +  IG 
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG-YEGNEFIGC 353

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            +VDMY+K G+   A  VF+ +   D++ W+ LIT   Q G + E+I++F +M   + + 
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL- 412

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PNQ T  S+L A ++ G L+ G  IHA V K     DV V+  LV MY K G + D   L
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 506 FYQVPRSSSVPWNAIISCHGIH--GQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +  +     + WNA +S  G+H  G  D+ L  F  ML+EG  P+  TF+S+L +CS
Sbjct: 473 YESMVDRDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   ++LH+++  SG +  +F  + LV+ YA  G +  +   F+ +  R+   WN+
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNT 688

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVDGKKIH 166
           +I  Y + G+ ++A+  F +  L  G+ PD  TF  +L AC  + LV+  K H
Sbjct: 689 IICGYAQNGQGNKALTAF-RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEH 740


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 287/772 (37%), Positives = 447/772 (57%), Gaps = 32/772 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H   + SG ++ V   T LV+ Y    D    R  FD +  +NV +W S++S Y R 
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARN 183

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   E +    Q  +  G+ P+ +TF  VL A  +   +  G ++H  ++K GFE+  FV
Sbjct: 184 GLNDEVIHLINQMQM-EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY +  +   A  +FD M VRDS +WN MI GY   G  +E   +   MRL GV
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGV 302

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +      + L +C++   +     +H  +VK+G EF   +   L+  Y+K   +  A +
Sbjct: 303 KLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFK 362

Query: 301 VFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL-----TSI 354
           +F       +VV+W ++I  + Q+N+   A   F  M + G++P+  T  ++     +S+
Sbjct: 363 LFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSL 422

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           ++QL         H  I++  ++ +   +  A++D Y K G +  +  VF  +P KD+++
Sbjct: 423 LSQL---------HAQIIK-AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVA 472

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHA 472
           W+ ++TG AQ   + +A+EVF Q+++E   + PN+ T+ S++ A S   A +  G +IHA
Sbjct: 473 WSAMLTGLAQTRDSEKAMEVFIQLVKEG--VKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 473 RVIK----NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
             +K    N LC    V++ L+ MY K G I+ A  +F +      V WN++I+ +G HG
Sbjct: 531 TAVKSGKSNALC----VSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHG 586

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
              KAL  F+ M ++G+  D +TF+ +LTAC+H+GLV EG++YF++M +++ I    +HY
Sbjct: 587 DAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHY 646

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL+ RAG    A + I  MP     +IW  LL ACR+H N+ELG +A+++L  +  
Sbjct: 647 SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQP 706

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            +   YVL+SNI+A  G WE    VR L  +R +KK  G S IE+ N++  F  G+ +HP
Sbjct: 707 NDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHP 766

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
             + +Y +L  L+ K+K +GY PD ++V  DVEE+ KE IL+ HSERLAIA+G+I+ PP 
Sbjct: 767 FSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPG 826

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +PIQI KNLR+CGDCHN  + IS I ER +IVRDSNRFHHFK G+CSCG YW
Sbjct: 827 APIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 270/542 (49%), Gaps = 16/542 (2%)

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
           ++   FD    +++  +N ++  + R     EA+  F     +SGL  D  T    LK C
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLH-SSGLGVDGLTLSCALKVC 114

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L D   G+++HC  LK GF  DV V  SL+ MY +       R +FD+M +++  SW 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           +++SGY ++G   E + ++++M++EGV+ +  T A++L   A    I  G+ +H  IVK+
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G EF  FV N LI MY K  M+  A  VFD M+ RD V+WN +I  Y      +     F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYA 392
             M+ AG++       +   + +Q  +   ++ +H  +++ G+ F +D  I  A++  Y+
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD--IRTALMVTYS 352

Query: 393 KLGIINSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGT 450
           K   ++ A  +F       +V++W  +I G+ QN    +A+++F QM  E   + PN  T
Sbjct: 353 KCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREG--VRPNHFT 410

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y ++L A      L Q   +HA++IK        VAT L+D Y K G + ++  +FY +P
Sbjct: 411 YSTVL-AGKPSSLLSQ---LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP 466

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
               V W+A+++        +KA+  F Q++ EGV+P+  TF S++ ACS S    E  +
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGK 526

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
             H    + G    L     ++ ++ + G++  A         R D   W +++     H
Sbjct: 527 QIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEER-DIVSWNSMITGYGQH 585

Query: 631 GN 632
           G+
Sbjct: 586 GD 587



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%)

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           R+A ++FD+   +D+  +N ++  + ++N    A   F  +  +G+  D LTL     + 
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
             L D    R VH   ++ G F+EDV +G ++VDMY K         +F+ + +K+V+SW
Sbjct: 115 GVLFDQVVGRQVHCQSLKSG-FLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            +L++GYA+NGL  E I +   M +   +NPN  T+ ++L A +    +  G+++HA ++
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQM-QMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIV 232

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           KN   F  FV   L+ MY K   + DA ++F  +    SV WN +I  +   G   +   
Sbjct: 233 KNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQ 292

Query: 536 FFRQMLDEGVRPDHITFVSLLTACS-----------HSGLVSEGQRY 571
            F +M   GV+     F + L  CS           H G+V  G  +
Sbjct: 293 MFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 10/181 (5%)

Query: 47  EIDFDDLFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           E  F  +  +C+     + H K++HA  V SGK   +  S+ L+  Y+  G++  +   F
Sbjct: 505 EYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVF 564

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LV 160
                R++ +WNSMI+ Y + G   +A++ F Q     GL  D  TF  VL AC +  LV
Sbjct: 565 TRQEERDIVSWNSMITGYGQHGDAKKALEVF-QIMQNQGLPLDDVTFIGVLTACTHAGLV 623

Query: 161 DGKKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
           +  + + +++   +  D      + ++ +Y R G+ + A  + + MP   S + W  +++
Sbjct: 624 EEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLA 683

Query: 218 G 218
            
Sbjct: 684 A 684


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 297/867 (34%), Positives = 473/867 (54%), Gaps = 84/867 (9%)

Query: 37  SPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFS--------------- 81
           S DC   +     F  L + C  ++ V+++H  ++  G +    S               
Sbjct: 21  SADCFGRDVSPTHFASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYV 80

Query: 82  -----STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
                 T +V  Y   G    +    + ++      WN ++  +++ G L  A+    + 
Sbjct: 81  SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRM 140

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            L +G +PD +T P  LKAC  L     G+ +H  +   GFE +VFV  +L+ MY R G 
Sbjct: 141 -LRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGS 199

Query: 194 ANVARKLFDDMP---VRDSGSWNAMISGYCQSGNAVEALDILDEMRL------EGVSMDP 244
              A  +FD++    + D  SWN++++ + +  N   AL++  EM +           D 
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDI 259

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           I++ +ILP CA    +     IH Y +++G   + FV N LI+ YAK G M  A++VF+ 
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI----------------------- 341
           M  +DVVSWN+++  Y QS +   A   F  M++  I                       
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379

Query: 342 ------------QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF-----------M 378
                       +P+ +T++SL S  A L        +H + +++               
Sbjct: 380 LDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD--VISWNTLITGYAQNGLASEAIEVF- 435
           ED+++ NA++DMY+K     +A ++F+ +P ++  V++W  +I GYAQ G +++A+++F 
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVDMY 493
           +M+ +   + PN  T   IL A +H+ ALR G +IHA V ++        FVA CL+DMY
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMY 559

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG +D A ++F  +P+ + V W +++S +G+HG+G +AL+ F +M   G  PD I+F+
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            LL ACSHSG+V +G  YF +M+ ++ +    +HY C++DL  R G L  A   IQ MP+
Sbjct: 620 VLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPM 679

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P A IW ALL ACR+H N+EL   A ++L  + +EN G Y L+SNIYAN  +W+ V  +
Sbjct: 680 EPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARI 739

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R L +  G+KK PG S ++       F+ G+R+HP   +IY  L  L  ++K +GYVP+ 
Sbjct: 740 RQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPET 799

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
           +F L DV+++EK ++L+ HSE+LA+A+G++++ P  PI+I KNLRVCGDCH+   +IS+I
Sbjct: 800 NFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKI 859

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            + EIIVRDS+RFHHFK+G CSCG YW
Sbjct: 860 VDHEIIVRDSSRFHHFKNGSCSCGGYW 886


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 277/722 (38%), Positives = 436/722 (60%), Gaps = 12/722 (1%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKK 164
           R++ +W+++IS Y    +  EA+  F+   L  G  P+ Y F  V +AC    N+  GK 
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDM-LECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 165 IHCSVLKLG-FEWDVFVAASLLHMYCRF-GLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           I   +LK G FE DV V  +L+ M+ +  G    A K+FD MP R+  +W  MI+ + Q 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G + +A+D+  +M L G   D  T++ ++  CA    +  G   H  ++K GL+ ++ V 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 283 NNLINMYAKF---GMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-PITAHGFFTTMQQ 338
            +L++MYAK    G +  A +VFD+M   +V+SW +II  Y QS      A   F  M Q
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             ++P+  T  S+    A L+D      V+  +++      + + GN+++ MY++ G + 
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV-GNSLISMYSRCGNME 302

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
           +A   F+ L  K+++S+NT++  YA++  + EA E+F  +E       N  T+ S+L   
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAG-TGVNAFTFASLLSGA 361

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           S +GA+ +G +IH+R++K+    ++ +   L+ MY +CG I+ A  +F ++   + + W 
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWT 421

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           ++I+    HG   +AL  F +ML+ GV P+ +T++++L+ACSH GL+SEG ++F  M+ E
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVE 481

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
            GI P ++HY C+VDL GR+GHL  A   + +MP + DA +    LGACR+HGNM+LG  
Sbjct: 482 HGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKH 541

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A++ + E D  +   Y+L+SN++A+ G+WE V E+R   ++R L K  G S IEV NKV 
Sbjct: 542 AAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVH 601

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            FY G+ +HP+ ++IYDEL  L  K+K LGY+P   FVL DVEE++KE  L  HSE++A+
Sbjct: 602 KFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAV 661

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           A+G IS+    PI++FKNLRVCGDCH   K+ S +  +EI++RD+NRFHHFKDG CSC D
Sbjct: 662 AYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCND 721

Query: 819 YW 820
           YW
Sbjct: 722 YW 723



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/499 (32%), Positives = 272/499 (54%), Gaps = 17/499 (3%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKT-VFSSTKLVN-FYANLGDLSFSRHT 101
           E  F  +F++C+   ++   K +   L+ +G  ++ V     L++ F    GDL  +   
Sbjct: 42  EYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKV 101

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
           FD +  RNV TW  MI+ + + G   +AVD F    L SG  PD +T   V+ AC     
Sbjct: 102 FDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVL-SGYVPDRFTLSGVVSACAEMGL 160

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRDSGSWNAM 215
           L  G++ HC V+K G + DV V  SL+ MY +    G  + ARK+FD MPV +  SW A+
Sbjct: 161 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220

Query: 216 ISGYCQSGNA-VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           I+GY QSG    EA+++  EM    V  +  T +S+L  CA   +I  G  ++  +VK  
Sbjct: 221 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 280

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           L     V N+LI+MY++ G M +A + FD + E+++VS+N+I+ AY +S +   A   F 
Sbjct: 281 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 340

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            ++ AG   +  T  SL S  + +        +H  I++ G F  ++ I NA++ MY++ 
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSG-FKSNLHICNALISMYSRC 399

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I +A  VF  +   +VISW ++ITG+A++G A+ A+E F  M E   ++PN+ TY+++
Sbjct: 400 GNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG-VSPNEVTYIAV 458

Query: 455 LPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RS 512
           L A SHVG + +G+K   +  +++ +   +    C+VD+ G+ G +++AM L   +P ++
Sbjct: 459 LSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKA 518

Query: 513 SSVPWNAIISCHGIHGQGD 531
            ++     +    +HG  D
Sbjct: 519 DALVLRTFLGACRVHGNMD 537



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 164/304 (53%), Gaps = 15/304 (4%)

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           +RD+VSW+++I+ Y  +     A   F  M + G  P+      +    +   +    + 
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKL-GIINSACAVFEGLPVKDVISWNTLITGYAQN 425
           + GF+++ G+F  DV +G A++DM+ K  G + SA  VF+ +P ++V++W  +IT + Q 
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G + +A+++F  M     + P++ T   ++ A + +G L  G + H  V+K+ L  DV V
Sbjct: 124 GFSRDAVDLFLDMVLSGYV-PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 486 ATCLVDMYGKC---GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK-ALNFFRQML 541
              LVDMY KC   G +DDA  +F ++P  + + W AII+ +   G  D+ A+  F +M+
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC----MVDLFGR 597
              V+P+H TF S+L AC++   +  G++ + ++     +K  L    C    ++ ++ R
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV-----VKMRLASINCVGNSLISMYSR 297

Query: 598 AGHL 601
            G++
Sbjct: 298 CGNM 301



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H+ ++ SG    +     L++ Y+  G++  +   F+ +   NV +W SMI+ + + 
Sbjct: 371 EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKH 430

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKL--GFEWDVF 179
           G  + A++ F++  L +G+ P+  T+  VL AC +  L+     H   +K+  G    + 
Sbjct: 431 GFATRALETFHKM-LEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRME 489

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
             A ++ +  R G    A +L + MP +          G C+    ++      EM LE 
Sbjct: 490 HYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQ 549

Query: 240 VSMDP 244
              DP
Sbjct: 550 DPHDP 554


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 287/747 (38%), Positives = 442/747 (59%), Gaps = 15/747 (2%)

Query: 85  LVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           L++ Y+  G    +   F  + S R++ +W++M+S +        A+  F    + +G  
Sbjct: 107 LISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM-IENGYY 165

Query: 144 PDFYTFPPVLKACRN---LVDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANV--A 197
           P+ Y F    +AC     +  G  I   V+K G+ + DV V   L+ M+ + G  ++  A
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK-GRGDLVSA 224

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            K+F+ MP R++ +W  MI+   Q G A EA+D+  +M   G   D  T++ ++  CA  
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF---GMMRHALRVFDQMMERDVVSWN 314
           + +L G  +H   ++HGL  +  V   LINMYAK    G M  A ++FDQ+++ +V SW 
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344

Query: 315 SIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           ++I  Y Q       A   F  M    + P+  T  S     A L   R    V    ++
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G F     + N+++ MYA+ G I+ A   F+ L  K++IS+NT+I  YA+N  + EA+E
Sbjct: 405 LG-FSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALE 463

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  +E+   +  +  T+ S+L   + +G + +G +IHARVIK+ L  +  V   L+ MY
Sbjct: 464 LFNEIED-QGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMY 522

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            +CG I+ A  +F  +   + + W +II+    HG   +AL  F +ML+EGVRP+ +T++
Sbjct: 523 SRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYI 582

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           ++L+ACSH GLV+EG ++F  M  E G+ P ++HY C+VD+ GR+G L  A  FI +MP 
Sbjct: 583 AVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPY 642

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
           + DA +W   LGACR+HGN+ELG  A+  + E +  +   Y+L+SN+YA++ KW+ V  +
Sbjct: 643 KADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNI 702

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R   +++ L K  G S +EV NKV  FY G+ +HPK  +IYDEL+NL+ K+K LGYVP+ 
Sbjct: 703 RKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNL 762

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
            FVL DVEE++KE +L  HSE++A+AFG+IS+    PI++FKNLR+CGDCH+  K+IS  
Sbjct: 763 DFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMA 822

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T REIIVRD+NRFHH KDG CSC +YW
Sbjct: 823 TGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 195/390 (50%), Gaps = 16/390 (4%)

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   +A+  L+ M  +G   D  T +  L  C R+ +   G L+H  + +  L+ +   
Sbjct: 44  NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103

Query: 282 SNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            N+LI++Y+K G    A  +F  M   RD++SW+++++ +  +N    A   F  M + G
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK-LGIINS 399
             P+     + T   +         S+ GF+++ G+   DV +G  ++DM+ K  G + S
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  VFE +P ++ ++W  +IT   Q G A EAI++F  M   +   P++ T   ++ A +
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM-IFSGYEPDRFTLSGVISACA 282

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLFYQVPRSSSVP 516
           ++  L  G ++H++ I++ L  D  V  CL++MY KC   G +  A  +F Q+   +   
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342

Query: 517 WNAIISCHGIHGQGD-KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           W A+I+ +   G  D +AL+ FR M+   V P+H TF S L AC++   +  G++ F   
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF--- 399

Query: 576 QEEFGIKPHLKHYGC----MVDLFGRAGHL 601
                +K       C    ++ ++ R+G +
Sbjct: 400 --THAVKLGFSSVNCVANSLISMYARSGRI 427



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 149/308 (48%), Gaps = 15/308 (4%)

Query: 71  VVSGKIKTVFSSTK-----LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           V +  +K  FSS       L++ YA  G +  +R  FD +  +N+ ++N++I  Y +   
Sbjct: 398 VFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLN 457

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAA 182
             EA++ F +     G+    +TF  +L    +   +  G++IH  V+K G + +  V  
Sbjct: 458 SEEALELFNEIE-DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+ MY R G    A ++F+DM  R+  SW ++I+G+ + G A +AL++  +M  EGV  
Sbjct: 517 ALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRP 576

Query: 243 DPITVASILPVCARSDNILSGL--LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           + +T  ++L  C+    +  G      +Y  +HG+   +     ++++  + G +  A++
Sbjct: 577 NEVTYIAVLSACSHVGLVNEGWKHFKSMY-TEHGVIPRMEHYACIVDILGRSGSLSEAIQ 635

Query: 301 VFDQM-MERDVVSWNSIIAAYE-QSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQ 357
             + M  + D + W + + A     N  +  H     ++Q    P    L+S L + +++
Sbjct: 636 FINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISK 695

Query: 358 LNDCRNSR 365
            ++  N R
Sbjct: 696 WDEVSNIR 703


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/688 (39%), Positives = 412/688 (59%), Gaps = 7/688 (1%)

Query: 138 LTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           L  G++ +  TF  VL +  +   L  GK IH  V +     DVFV  +L++ Y + G  
Sbjct: 2   LLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSL 61

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             ARK+FD MP R  G+WN+MIS Y  S  + EA  I   M+ EG   D +T  SIL  C
Sbjct: 62  TDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDAC 121

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
              +N+  G  +   I +   E +LFV   LI MYA+     +A +VF +M ++++++W+
Sbjct: 122 VNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWS 181

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +II A+        A  +F  MQQ GI P+ +T +SL +     +       +H  I   
Sbjct: 182 AIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEH 241

Query: 375 GWFMEDVIIGNAVVDMYAK--LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           G   +   + NA+V++Y +   G ++ A  + + +  + + +WN LI GY  +G + EA+
Sbjct: 242 G-LDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           E +Q ++    I  ++ T++S+L A +   +L +G  IH+  ++  L  DV V   L +M
Sbjct: 301 ETYQRLQ-LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCG +++A  +F  +P  S+V WN ++  +  HG+ ++ L   R+M  EGV+ + ITF
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           VS+L++CSH+GL++EG +YFH +  + GI+   +HYGC+VDL GRAG L  A  +I  MP
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
             P+   W +LLGACR+H +++ G +A+ +L E+D  N    V++SNIY+  G W+   +
Sbjct: 480 SEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAK 539

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           +R     R +KK PG SSI+V NKV  F   + +HP+  +IYD++  L   M+  GYVPD
Sbjct: 540 LRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD 599

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
              VL DV+E++KE +L  HSE+LAIAFG+IS+P KS + IFKNLRVC DCH  TKFIS+
Sbjct: 600 TKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISK 659

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IT REI+VRD++RFHHF+DG CSC DYW
Sbjct: 660 ITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 240/486 (49%), Gaps = 10/486 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H+ +  S     VF +T LVN Y   G L+ +R  FD +  R+V TWNSMIS Y   
Sbjct: 30  KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 89

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            R  EA   F Q     G R D  TF  +L AC    NL  GK +  S+ +  FE D+FV
Sbjct: 90  ERSGEAFFIF-QRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFV 148

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY R      A ++F  M  ++  +W+A+I+ +   G+  EAL     M+ EG+
Sbjct: 149 GTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 208

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK--FGMMRHA 298
             + +T  S+L        +     IHL I +HGL+    +SN L+N+Y +   G +  A
Sbjct: 209 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVA 268

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +  +M E+ + +WN +I  Y        A   +  +Q   I  D +T +S+ +     
Sbjct: 269 EVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSS 328

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + +H   +  G    DVI+ NA+ +MY+K G + +A  +F+ +P++  +SWN +
Sbjct: 329 TSLAEGKMIHSNAVECG-LDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGM 387

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKN 477
           +  YAQ+G + E +++ + ME+   +  N  T+VS+L + SH G + +G +  H+     
Sbjct: 388 LQAYAQHGESEEVLKLIRKMEQ-EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDR 446

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-VPWNAIISCHGIHGQGDKALNF 536
            +        CLVD+ G+ G++ +A     ++P     V W +++    +H   D+    
Sbjct: 447 GIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLA 506

Query: 537 FRQMLD 542
            R++L+
Sbjct: 507 ARKLLE 512



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 228/458 (49%), Gaps = 18/458 (3%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M LEGV  + IT  ++L      D +  G  IH  + +     ++FV+  L+N Y K G 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A +VFD M  R V +WNS+I+AY  S     A   F  MQ  G + D +T +S+   
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSI--- 117

Query: 355 VAQLNDCRNSRSV-HGFIMRRGW----FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
              L+ C N  ++ HG  +R       F  D+ +G A++ MYA+     +A  VF  +  
Sbjct: 118 ---LDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ 174

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K++I+W+ +IT +A +G   EA+  F+MM++   I PN+ T++S+L  ++    L +  +
Sbjct: 175 KNLITWSAIITAFADHGHCGEALRYFRMMQQ-EGILPNRVTFISLLNGFTTPSGLEELSR 233

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKC--GRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
           IH  + ++ L     ++  LV++YG+C  G +D A  +  ++       WN +I+ + +H
Sbjct: 234 IHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLH 293

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G+  +AL  ++++  E +  D +TF+S+L AC+ S  ++EG +  H    E G+   +  
Sbjct: 294 GRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIV 352

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVASDRLFE 645
              + +++ + G +  A     +MP+R   S W  +L A   HG  E  L  +       
Sbjct: 353 KNALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESEEVLKLIRKMEQEG 411

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           V    + +  ++S+        EG     SL  DRG++
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 449



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 182/382 (47%), Gaps = 12/382 (3%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  +  +C     L H K +   +  +     +F  T L+  YA       +   F  
Sbjct: 112 VTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGR 171

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVD 161
           +  +N+ TW+++I+ +   G   EA+  +++     G+ P+  TF  +L        L +
Sbjct: 172 MKQKNLITWSAIITAFADHGHCGEALR-YFRMMQQEGILPNRVTFISLLNGFTTPSGLEE 230

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             +IH  + + G +    ++ +L+++Y  C  G  +VA  +  +M  +   +WN +I+GY
Sbjct: 231 LSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGY 290

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
              G + EAL+    ++LE + +D +T  S+L  C  S ++  G +IH   V+ GL+ ++
Sbjct: 291 TLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 350

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V N L NMY+K G M +A R+FD M  R  VSWN ++ AY Q  +          M+Q 
Sbjct: 351 IVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQE 410

Query: 340 GIQPDLLTLVSLTSIVAQLN-DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           G++ + +T VS+ S  +         +  H     RG  ++    G  +VD+  + G + 
Sbjct: 411 GVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG-CLVDLLGRAGKLQ 469

Query: 399 SACAVFEGLPVK-DVISWNTLI 419
            A      +P + ++++W +L+
Sbjct: 470 EAEKYISKMPSEPEIVTWASLL 491



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 47  EIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           ++ F  +  +CT    L   K +H+  V  G    V     L N Y+  G +  +R  FD
Sbjct: 315 KVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFD 374

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            +  R+  +WN M+  Y + G   E +    +     G++ +  TF  VL +C +   + 
Sbjct: 375 SMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKME-QEGVKLNGITFVSVLSSCSHAGLIA 433

Query: 161 DG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
           +G +  H      G E        L+ +  R G    A K    MP   +  +W +++ G
Sbjct: 434 EGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLL-G 492

Query: 219 YCQ 221
            C+
Sbjct: 493 ACR 495


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/761 (37%), Positives = 433/761 (56%), Gaps = 8/761 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL + +G     F    L+  Y   G +  +   F+ +  RN+ +WNS++      G 
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276

Query: 126 LSEAVDCFYQFTLTS--GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
             E    F +  ++   GL PD  T   V+ AC  + +   G  +H    KLG   +V V
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEG 239
             SL+ MY + G    AR LFD    ++  SWN +I GY + G+     ++L EM R E 
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V ++ +TV ++LP C+    +LS   IH Y  +HG   +  V+N  +  YAK   +  A 
Sbjct: 397 VRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAE 456

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           RVF  M  + V SWN++I A+ Q+  P  +   F  M  +G+ PD  T+ SL    A+L 
Sbjct: 457 RVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLK 516

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
             R  + +HGF++R G  + D  IG +++ +Y +   +     +F+ +  K ++ WN +I
Sbjct: 517 FLRCGKEIHGFMLRNGLEL-DEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMI 575

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           TG++QN L  EA++ F+ M     I P +     +L A S V ALR G ++H+  +K  L
Sbjct: 576 TGFSQNELPCEALDTFRQMLS-GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHL 634

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D FV   L+DMY KCG ++ + ++F +V       WN II+ +GIHG G KA+  F  
Sbjct: 635 SEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFEL 694

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M ++G RPD  TF+ +L AC+H+GLV+EG +Y   MQ  +G+KP L+HY C+VD+ GRAG
Sbjct: 695 MQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAG 754

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            L  A   +  MP  PD+ IW +LL +CR +G++E+G   S +L E++      YVL+SN
Sbjct: 755 QLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSN 814

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           +YA +GKW+ V +VR   ++ GL K  G S IE+   V  F   + +  + +KI      
Sbjct: 815 LYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIK 874

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           L  K+  +GY PD S VL ++EE+ K  IL SHSE+LAI+FG++++   + +++ KNLR+
Sbjct: 875 LEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRI 934

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           C DCHN  K +S++ +R+IIVRD+ RFHHFK+G+C+CGD+W
Sbjct: 935 CVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 331/659 (50%), Gaps = 38/659 (5%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSC---TK 59
           RL   C    L   L LL +H       A +  +S   +  E+  I    L ++C     
Sbjct: 59  RLHNLCDSGNLNDALNLLHSH-------AQNGTVSSSDISKEAIGI----LLRACGHHKN 107

Query: 60  LHHVKRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           +H  +++HAL+  S K++  V  ST+++  Y+  G  S SR  FD    ++++ +N+++S
Sbjct: 108 IHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLS 167

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            Y R     +A+  F +    + L PD +T P V KAC  + D   G+ +H   LK G  
Sbjct: 168 GYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGF 227

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            D FV  +L+ MY + G    A K+F+ M  R+  SWN+++    ++G   E   +   +
Sbjct: 228 SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRL 287

Query: 236 RL---EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            +   EG+  D  T+ +++P CA    +  G+++H    K G+   + V+N+L++MY+K 
Sbjct: 288 LISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKC 347

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSL 351
           G +  A  +FD    ++VVSWN+II  Y +  D          MQ +  ++ + +T++++
Sbjct: 348 GYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNV 407

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
               +  +   + + +HG+  R G F++D ++ NA V  YAK   ++ A  VF G+  K 
Sbjct: 408 LPACSGEHQLLSLKEIHGYAFRHG-FLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKT 466

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V SWN LI  +AQNG   +++++F +M + + ++P++ T  S+L A + +  LR G +IH
Sbjct: 467 VSSWNALIGAHAQNGFPGKSLDLFLVMMD-SGMDPDRFTIGSLLLACARLKFLRCGKEIH 525

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
             +++N L  D F+   L+ +Y +C  +     +F ++   S V WN +I+    +    
Sbjct: 526 GFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPC 585

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG-- 589
           +AL+ FRQML  G++P  I    +L ACS    +  G+         F +K HL      
Sbjct: 586 EALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEV-----HSFALKAHLSEDAFV 640

Query: 590 --CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
              ++D++ + G +  + N    +  + D ++W  ++    IHG+     + +  LFE+
Sbjct: 641 TCALIDMYAKCGCMEQSQNIFDRVNEK-DEAVWNVIIAGYGIHGH----GLKAIELFEL 694



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 13/207 (6%)

Query: 46  REIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           +EI    +  +C+++  +   K +H+  + +   +  F +  L++ YA  G +  S++ F
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIF 661

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---L 159
           D ++ ++   WN +I+ Y   G   +A++ F +     G RPD +TF  VL AC +   +
Sbjct: 662 DRVNEKDEAVWNVIIAGYGIHGHGLKAIELF-ELMQNKGGRPDSFTFLGVLIACNHAGLV 720

Query: 160 VDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMIS 217
            +G K    +  L G +  +   A ++ M  R G    A KL ++MP   DSG W++++S
Sbjct: 721 TEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLS 780

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDP 244
                G+    L+I +E+  + + ++P
Sbjct: 781 SCRNYGD----LEIGEEVSKKLLELEP 803


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/748 (36%), Positives = 426/748 (56%), Gaps = 7/748 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S+  +++ Y   G+L  +R  FD +  R   TW  +I  Y +  +  EA + F Q 
Sbjct: 81  KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 140

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKI---HCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G  PD+ TF  +L  C     G +I      ++KLG++  + V  +L+  YC+   
Sbjct: 141 Q-RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 199

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            ++A +LF +MP  DS S+NAMI+GY + G   +A+++  EM+  G+     T A++L  
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCA 259

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               D+I+ G  IH +++K    +N+FVSN L++ Y+K   +  A ++FD+M E+D VS+
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY 319

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N II+ Y        A   F  +Q            ++ SI +   D    R +H   + 
Sbjct: 320 NVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIV 379

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
                E +++GN++VDMYAK G    A  +F  L  +  + W  +I+ Y Q G   E ++
Sbjct: 380 TTADSE-ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQ 438

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  M + + I  +Q T+ S+L A + + +L  G ++H+ +IK+    +VF  + L+D+Y
Sbjct: 439 LFNKMRQASVI-ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVY 497

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I DA+  F ++P  + V WNA+IS +  +G+ +  L  F++M+  G++PD ++F+
Sbjct: 498 AKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFL 557

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L+ACSHSGLV EG  +F+ M + + + P  +HY  +VD+  R+G    A   +  MP+
Sbjct: 558 GVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPI 617

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDE 672
            PD  +W ++L ACRIH N EL   A+D+LF ++   +   YV MSNIYA  G+WE V +
Sbjct: 618 DPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSK 677

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V    RDRG+KK P +S +E+ ++  +F   +R HP+ E+I  ++  LT  M+ LGY PD
Sbjct: 678 VHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPD 737

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            S  L + +E  K   L  HSERLAIAF +IS+P  SPI + KNLR C DCH   K IS+
Sbjct: 738 TSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISK 797

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  REI VRDS RFHHF+DG CSCGD+W
Sbjct: 798 IVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 238/501 (47%), Gaps = 35/501 (6%)

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           I   ++K GF+ D   +   +  + + G  + AR+LF+ MP +++ S N MISGY +SGN
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 225 AVEALDILD-------------------------------EMRLEGVSMDPITVASILPV 253
             EA  + D                               +M+  G   D +T  ++L  
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C   +       +   I+K G +  L V N L++ Y K   +  A ++F +M E D VS+
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N++I  Y +      A   F  MQ +G++P   T  ++      L+D    + +H F+++
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIK 278

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
              F+ +V + NA++D Y+K   +  A  +F+ +P +D +S+N +I+GYA +G    A +
Sbjct: 279 TN-FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 337

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F+ + +    +  Q  + ++L   S+      G +IHA+ I      ++ V   LVDMY
Sbjct: 338 LFREL-QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 396

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG+ ++A  +F  +   S+VPW A+IS +   G  ++ L  F +M    V  D  TF 
Sbjct: 397 AKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFA 456

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           SLL A +    +S G++  H    + G   ++     ++D++ + G +  A    Q MP 
Sbjct: 457 SLLRASASIASLSLGKQ-LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD 515

Query: 614 RPDASIWGALLGACRIHGNME 634
           R   S W A++ A   +G  E
Sbjct: 516 RNIVS-WNAMISAYAQNGEAE 535



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 204/422 (48%), Gaps = 26/422 (6%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H+ ++ +  +  VF S  L++FY+    +  +R  FD +  ++  ++N +IS Y   
Sbjct: 270 QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWD 329

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G+   A D F +   T+  R  F  F  +L    N +D   G++IH   +    + ++ V
Sbjct: 330 GKHKYAFDLFRELQFTAFDRKQF-PFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILV 388

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY + G    A  +F ++  R +  W AMIS Y Q G   E L + ++MR   V
Sbjct: 389 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 448

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T AS+L   A   ++  G  +H +I+K G   N+F  + L+++YAK G ++ A++
Sbjct: 449 IADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQ 508

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ--- 357
            F +M +R++VSWN++I+AY Q+ +       F  M  +G+QPD ++ + + S  +    
Sbjct: 509 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 568

Query: 358 ----LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DV 412
               L    +   ++    RR  +        +VVDM  + G  N A  +   +P+  D 
Sbjct: 569 VEEGLWHFNSMTQIYKLDPRREHYA-------SVVDMLCRSGRFNEAEKLMAEMPIDPDE 621

Query: 413 ISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           I W++++     +    LA  A +    MEE  +  P    YV++   Y+  G      K
Sbjct: 622 IMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP----YVNMSNIYAAAGQWENVSK 677

Query: 470 IH 471
           +H
Sbjct: 678 VH 679



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 14/321 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++HA  +V+     +     LV+ YA  G    +   F ++++R+   W +MIS YV+ 
Sbjct: 371 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQK 430

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   E +  F +    S +  D  TF  +L+A  ++     GK++H  ++K GF  +VF 
Sbjct: 431 GFYEEGLQLFNKMRQASVI-ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFS 489

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++LL +Y + G    A + F +MP R+  SWNAMIS Y Q+G A   L    EM L G+
Sbjct: 490 GSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGL 549

Query: 241 SMDPITVASILPVCARSDNILSGL-----LIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
             D ++   +L  C+ S  +  GL     +  +Y +    E    V    ++M  + G  
Sbjct: 550 QPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASV----VDMLCRSGRF 605

Query: 296 RHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
             A ++  +M ++ D + W+S++ A     +   A      +       D    V++++I
Sbjct: 606 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNI 665

Query: 355 VAQLNDCRNSRSVHGFIMRRG 375
            A      N   VH  +  RG
Sbjct: 666 YAAAGQWENVSKVHKAMRDRG 686



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 38/246 (15%)

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL S   +LN   N   +   I++ G F  D    N  V  + K G ++ A  +FE +P 
Sbjct: 25  SLQSPKLRLNVVNN---IDARIVKTG-FDPDTSRSNFRVGNFLKNGELSQARQLFEKMPH 80

Query: 410 KDVISWNTLITGYAQNG-------------------------------LASEAIEVFQMM 438
           K+ +S N +I+GY ++G                                  EA E+F  M
Sbjct: 81  KNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM 140

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           + C    P+  T+V++L   +      Q  ++  ++IK      + V   LVD Y K  R
Sbjct: 141 QRCG-TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNR 199

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +D A  LF ++P   SV +NA+I+ +   G  +KA+N F +M + G++P   TF ++L  
Sbjct: 200 LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL-- 257

Query: 559 CSHSGL 564
           C++ GL
Sbjct: 258 CANIGL 263


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/639 (41%), Positives = 411/639 (64%), Gaps = 17/639 (2%)

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           L  +  K FD   V    SWN++I+   + G++ E+L     MR   +  +  T    + 
Sbjct: 34  LTTLFNKYFDRTDVY---SWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIK 90

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+   ++ SG   H   +  G E +LFVS+ LI+MY+K G + +A  +FD++  R++V+
Sbjct: 91  SCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVT 150

Query: 313 WNSIIAAYEQSNDPITAHGFFTTM---------QQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           W S+I  Y Q++D   A   F            ++ G   D + ++S+ S  +++++   
Sbjct: 151 WTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAV 210

Query: 364 SRSVHGFIMRRGWFMEDVIIG--NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
           S  VHG  ++ G    D ++G  N ++D YAK G ++ +  VF+ +  KDV+SWN++I  
Sbjct: 211 SEGVHGVAIKVGL---DKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAV 267

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           YAQNGL+++A EVF  M +      N+ T  ++L A +H GALR G+ +H +VIK     
Sbjct: 268 YAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVN 327

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +V +AT ++DMY KCG+ + A + F  +   +   W A+I+ +G+HG   +AL+ F QM+
Sbjct: 328 NVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMI 387

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             GV+P++ITF+S+L ACSH+G + EG R+F+ M  E+ ++P ++HYGCMVDL GRAG++
Sbjct: 388 WAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYI 447

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A+N I++M VR D  +WG+LL ACRIH ++EL  +++  LF++D  N GYYVL++NIY
Sbjct: 448 KEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIY 507

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A+ G+W+ V+ +R L +DRGL K PG+S +E+  +V +F  G++ HP++EKIY  L  L+
Sbjct: 508 ADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELS 567

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
            K++  GYVP+ + VL DV+E+EKE I+  HSE+LA+AFG+++S P S I + KNLRVCG
Sbjct: 568 VKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCG 627

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH   K IS+I  REIIVRD+ RFHHFKDG+CSCGDYW
Sbjct: 628 DCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/474 (33%), Positives = 253/474 (53%), Gaps = 23/474 (4%)

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
           LL +S KI     ST       NL  L F+++ FD     +VY+WNS+I+   R G   E
Sbjct: 11  LLTISFKIHKNHFSTTAAATNTNLTTL-FNKY-FDRT---DVYSWNSLIAELARGGDSCE 65

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLL 185
           ++  F  +     ++P+  TFP  +K+C  L D   GK+ H   L  GFE D+FV+++L+
Sbjct: 66  SLRAF-SWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALI 124

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE------- 238
            MY + G  + AR LFD++P R+  +W ++I+GY Q+ +A EAL +  E   E       
Sbjct: 125 DMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGE 184

Query: 239 --GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G S+D + + S+L  C+R  N      +H   +K GL+  + V N L++ YAK G + 
Sbjct: 185 EVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVS 244

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSLTSIV 355
            + +VFD M E+DVVSWNS+IA Y Q+     A   F  M +A G + + +TL +L    
Sbjct: 245 LSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLAC 304

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A     R    +H  +++ G ++ +VI+  +++DMY K G    A   F+G+  K+V SW
Sbjct: 305 AHEGALRVGMCLHDQVIKMG-YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSW 363

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARV 474
             +I GY  +G A EA++VF  M     + PN  T++S+L A SH G L +G +  +A  
Sbjct: 364 TAMIAGYGMHGFAREALDVFYQMIWAG-VKPNYITFISVLAACSHAGFLEEGWRWFNAMS 422

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            +  +   V    C+VD+ G+ G I +A +L   +  R   V W ++++   IH
Sbjct: 423 HEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%), Gaps = 44/437 (10%)

Query: 55  QSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           +SC+ L  +   K+ H   +V G    +F S+ L++ Y+  G LS +R  FD I  RN+ 
Sbjct: 90  KSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIV 149

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTS--------GLRPDFYTFPPVLKAC---RNLV 160
           TW S+I+ YV+     EA+  F +F            G   D      VL AC    N  
Sbjct: 150 TWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKA 209

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
             + +H   +K+G +  + V  +LL  Y + G  +++RK+FDDM  +D  SWN+MI+ Y 
Sbjct: 210 VSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYA 269

Query: 221 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           Q+G + +A ++   M +  G   + +T++++L  CA    +  G+ +H  ++K G   N+
Sbjct: 270 QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            ++ ++I+MY K G    A   FD M E++V SW ++IA Y        A   F  M  A
Sbjct: 330 IMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVV 388
           G++P+ +T +S+ +  +           H   +  GW   + +               +V
Sbjct: 390 GVKPNYITFISVLAACS-----------HAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMV 438

Query: 389 DMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP 446
           D+  + G I  A  + + + V +D + W +L+     +    + +E+ ++   E  +++P
Sbjct: 439 DLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIH----KDVELAEISARELFKLDP 494

Query: 447 -NQGTYVSILPAYSHVG 462
            N G YV +   Y+  G
Sbjct: 495 SNCGYYVLLANIYADAG 511


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 288/767 (37%), Positives = 435/767 (56%), Gaps = 17/767 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H L+V +G ++ VF    LV+FY   G ++ +   FD +  RN+ +WNSMI V+   G 
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268

Query: 126 LSEAVDCFYQFTLTSG---LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
             E+     +    +G     PD  T   VL  C   R +  GK +H   +KL  + ++ 
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           +  +L+ MY + G    A+ +F     ++  SWN M+ G+   G+     D+L +M   G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388

Query: 240 --VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
             V  D +T+ + +PVC     + S   +H Y +K    +N  V+N  +  YAK G + +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A RVF  +  + V SWN++I  + QSNDP  +      M+ +G+ PD  T+ SL S  ++
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L   R  + VHGFI+R  W   D+ +  +V+ +Y   G + +  A+F+ +  K ++SWNT
Sbjct: 509 LKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY---SHVGALRQGIKIHARV 474
           +ITGY QNG    A+ VF+ M     +   Q   +S++P +   S + +LR G + HA  
Sbjct: 568 VITGYLQNGFPDRALGVFRQMV----LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           +K+ L  D F+A  L+DMY K G I  +  +F  +   S+  WNA+I  +GIHG   +A+
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +M   G  PD +TF+ +LTAC+HSGL+ EG RY   M+  FG+KP+LKHY C++D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743

Query: 595 FGRAGHLGMAHNFI-QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
            GRAG L  A   + + M    D  IW +LL +CRIH N+E+G   + +LFE++ E    
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YVL+SN+YA +GKWE V +VR    +  L+K  G S IE+N KV  F  G R    +E+I
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
                 L  K+  +GY PD   V  D+ E+EK   L  HSE+LA+ +G+I +   + I++
Sbjct: 864 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 923

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +KNLR+C DCHN  K IS++ EREI+VRD+ RFHHFK+G+CSCGDYW
Sbjct: 924 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 176/586 (30%), Positives = 306/586 (52%), Gaps = 30/586 (5%)

Query: 64  KRLHALLVVSGKIKTV-FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +++H L+  S +++      T+++  YA  G    SR  FD +  +N++ WN++IS Y R
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
                E ++ F +   T+ L PD +T+P V+KAC  + D   G  +H  V+K G   DVF
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
           V  +L+  Y   G    A +LFD MP R+  SWN+MI  +  +G + E+  +L EM  E 
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283

Query: 239 --GVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
             G  M D  T+ ++LPVCAR   I  G  +H + VK  L+  L ++N L++MY+K G +
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ--AG---IQPDLLTLVS 350
            +A  +F     ++VVSWN+++  +    D    HG F  ++Q  AG   ++ D +T+++
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGD---THGTFDVLRQMLAGGEDVKADEVTILN 400

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
              +    +   + + +H + +++  F+ + ++ NA V  YAK G ++ A  VF G+  K
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
            V SWN LI G+AQ+     +++    M + + + P+  T  S+L A S + +LR G ++
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H  +I+N L  D+FV   ++ +Y  CG +    +LF  +   S V WN +I+ +  +G  
Sbjct: 519 HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 578

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACS-----HSGLVSEGQRYFHMMQEEFGIKPHL 585
           D+AL  FRQM+  G++   I+ + +  ACS       G  +      H+++++  I   L
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                 +D++ + G +  +      +  +  AS W A++    IHG
Sbjct: 639 ------IDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 207/408 (50%), Gaps = 12/408 (2%)

Query: 162 GKKIHCSVL-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+KIH  V        D  +   ++ MY   G  + +R +FD +  ++   WNA+IS Y 
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162

Query: 221 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           ++    E L+   EM     +  D  T   ++  CA   ++  GL +H  +VK GL  ++
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF---TTM 336
           FV N L++ Y   G +  AL++FD M ER++VSWNS+I  +  S++  +   F      M
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMM 280

Query: 337 QQAG---IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           ++ G     PD+ TLV++  + A+  +    + VHG+ ++     +++++ NA++DMY+K
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSK 339

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYV 452
            G I +A  +F+    K+V+SWNT++ G++  G      +V  QM+    ++  ++ T +
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           + +P   H   L    ++H   +K    ++  VA   V  Y KCG +  A  +F+ +   
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +   WNA+I  H        +L+   QM   G+ PD  T  SLL+ACS
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 204/430 (47%), Gaps = 28/430 (6%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L  +K LH   +    +     +   V  YA  G LS+++  F  I  + V +WN++I  
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           + +      ++D   Q  + SGL PD +T   +L AC   ++L  GK++H  +++   E 
Sbjct: 471 HAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+FV  S+L +Y   G     + LFD M  +   SWN +I+GY Q+G    AL +  +M 
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           L G+ +  I++  +   C+   ++  G   H Y +KH LE + F++ +LI+MYAK G + 
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            + +VF+ + E+   SWN++I  Y        A   F  MQ+ G  PD LT + +     
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV----- 704

Query: 357 QLNDCRNSRSVHGFI-----MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVF--EGLP 408
            L  C +S  +H  +     M+  + ++  +   A V+DM  + G ++ A  V   E   
Sbjct: 705 -LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763

Query: 409 VKDVISWNTLITG--YAQNGLASE--AIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             DV  W +L++     QN    E  A ++F++  E  E       YV +   Y+ +G  
Sbjct: 764 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE------NYVLLSNLYAGLGKW 817

Query: 465 RQGIKIHARV 474
               K+  R+
Sbjct: 818 EDVRKVRQRM 827



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 6/278 (2%)

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D    R +H  +        D ++   ++ MYA  G  + +  VF+ L  K++  WN +
Sbjct: 98  KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+ Y++N L  E +E F  M    ++ P+  TY  ++ A + +  +  G+ +H  V+K  
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L  DVFV   LV  YG  G + DA+ LF  +P  + V WN++I     +G  +++     
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277

Query: 539 QMLDE----GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           +M++E       PD  T V++L  C+    +  G +  H    +  +   L     ++D+
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDM 336

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           + + G +  A   I  M    +   W  ++G     G+
Sbjct: 337 YSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGD 373


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 286/800 (35%), Positives = 461/800 (57%), Gaps = 64/800 (8%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T +V  Y   G   ++    + ++      WN +I  +++ GRL  A++   +  L +G 
Sbjct: 55  TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM-LRAGT 113

Query: 143 RPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           R D +T P VLKAC  L     G   H  +   GFE +VF+  +L+ MY R G    A  
Sbjct: 114 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 173

Query: 200 LFDDMPVR---DSGSWNAMISGYCQSGNAVEALDILDEMRL------EGVSMDPITVASI 250
           +FD++  R   D  SWN+++S + +S NA  ALD+  +M L           D I++ +I
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 233

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           LP C     +     +H   +++G   ++FV N LI+ YAK G+M +A++VF+ M  +DV
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQ-------------------------------- 338
           VSWN+++A Y QS +   A   F  M++                                
Sbjct: 294 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQ 353

Query: 339 ---AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR---------GWFMEDVIIGNA 386
              +G  P+ +T++S+ S  A L        +H + ++          G   ED+++ NA
Sbjct: 354 MIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 413

Query: 387 VVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYAQNGLASEAIEVF-QMMEECNE 443
           ++DMY+K     +A ++F+ +P+  ++V++W  +I G+AQ G +++A+++F +M+ E   
Sbjct: 414 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 473

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD---VFVATCLVDMYGKCGRID 500
           + PN  T   IL A +H+ A+R G +IHA V+++   +D    FVA CL++MY KCG +D
Sbjct: 474 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ-YDSSAYFVANCLINMYSKCGDVD 532

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A  +F  + + S++ W ++++ +G+HG+G +AL+ F +M   G  PD ITF+ +L ACS
Sbjct: 533 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 592

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H G+V +G  YF  M  ++G+ P  +HY   +DL  R G L  A   +++MP+ P A +W
Sbjct: 593 HCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVW 652

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
            ALL ACR+H N+EL   A ++L E+++EN G Y L+SNIYA  G+W+ V  +R L +  
Sbjct: 653 VALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKS 712

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+KK PG S ++       F+ G+R+HP   +IY  L +L  ++K++GYVP+ +F L DV
Sbjct: 713 GIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDV 772

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           +E+EK ++L  HSE+LA+A+G++++ P  PI+I KNLRVCGDCH+   +IS+I + EI+V
Sbjct: 773 DEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVV 832

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD +RFHHFK+G CSCG YW
Sbjct: 833 RDPSRFHHFKNGSCSCGGYW 852



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 273/599 (45%), Gaps = 91/599 (15%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR---NVYTWNSMISVYVR 122
            H L+  +G    VF    LV  Y+  G L  +   FD I+ R   +V +WNS++S +V+
Sbjct: 139 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 198

Query: 123 CGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACRNL---VDGKKIHCSVLKLGF 174
                 A+D F + TL    +P     D  +   +L AC +L      K++H + ++ G 
Sbjct: 199 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 258

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
             DVFV  +L+  Y + GL   A K+F+ M  +D  SWNAM++GY QSGN   A ++   
Sbjct: 259 FLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKN 318

Query: 235 MRLEGVSMDP-----------------------------------ITVASILPVCARSDN 259
           MR E + +D                                    +T+ S+L  CA    
Sbjct: 319 MRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGA 378

Query: 260 ILSGLLIHLYIVKH----------GLEFNLFVSNNLINMYAKFGMMRHALRVFDQ--MME 307
              G+ IH Y +K+          G + +L V N LI+MY+K    + A  +FD   + E
Sbjct: 379 FSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 438

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           R+VV+W  +I  + Q  D   A   F  M  +  G+ P+  T+  +    A L   R  +
Sbjct: 439 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 498

Query: 366 SVHGFIMRRGWFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
            +H +++R   +      + N +++MY+K G +++A  VF+ +  K  ISW +++TGY  
Sbjct: 499 QIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 558

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           +G  SEA+++F  M +   + P+  T++ +L A SH G + QG+            FD  
Sbjct: 559 HGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLSY----------FDSM 607

Query: 485 VA-----------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDK 532
            A              +D+  + GR+D A      +P   ++V W A++S   +H   + 
Sbjct: 608 SADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVEL 667

Query: 533 ALNFFRQMLDEGVRPD-HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           A +   ++++     D   T +S + A   +G   +  R  H+M++  GIK   K  GC
Sbjct: 668 AEHALNKLVEMNAENDGSYTLISNIYAT--AGRWKDVARIRHLMKKS-GIK---KRPGC 720



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 181/405 (44%), Gaps = 54/405 (13%)

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +   ++  Y   G   +AL V +++     V WN +I  + +     +A      M +AG
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            + D  TL  +     +L   R   + HG I   G F  +V I NA+V MY++ G +  A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNG-FESNVFICNALVAMYSRCGSLEEA 171

Query: 401 CAVFEGLP---VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-----TYV 452
             +F+ +    + DVISWN++++ + ++  A  A+++F  M       P        + V
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF------ 506
           +ILPA   + A+ Q  ++H   I+N    DVFV   L+D Y KCG +++A+ +F      
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291

Query: 507 ------------------------YQVPRSSSVP-----WNAIISCHGIHGQGDKALNFF 537
                                   ++  R  ++P     W A+I+ +   G   +ALN F
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEG--------QRYFHMMQEEFGIKPH-LKHY 588
           RQM+  G  P+ +T +S+L+AC+  G  S+G        +     +  +FG +   L  Y
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRP-DASIWGALLGACRIHGN 632
             ++D++ +      A +   ++P+   +   W  ++G    +G+
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 456



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 207/487 (42%), Gaps = 73/487 (14%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I   ++  +C  L  V   K +H   + +G    VF    L++ YA  G +  +   F+ 
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 287

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCF------------------------------- 133
           + +++V +WN+M++ Y + G    A + F                               
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 347

Query: 134 ---YQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLK----------LGFEWD 177
              ++  + SG  P+  T   VL AC +L     G +IH   LK           G + D
Sbjct: 348 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 407

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEM 235
           + V  +L+ MY +      AR +FDD+P+  R+  +W  MI G+ Q G++ +AL +  EM
Sbjct: 408 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 467

Query: 236 RLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL--EFNLFVSNNLINMYAK 291
             E  GV+ +  T++ IL  CA    I  G  IH Y+++H        FV+N LINMY+K
Sbjct: 468 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 527

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV-- 349
            G +  A  VFD M ++  +SW S++  Y        A   F  M++AG  PD +T +  
Sbjct: 528 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 587

Query: 350 ----SLTSIVAQLNDCRNSRSV-HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
               S   +V Q     +S S  +G   R   +          +D+ A+ G ++ A    
Sbjct: 588 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY-------AIDLLARFGRLDKAWKTV 640

Query: 405 EGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           + +P++   + W  L++    +     A      + E N    N G+Y  I   Y+  G 
Sbjct: 641 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA--ENDGSYTLISNIYATAGR 698

Query: 464 LRQGIKI 470
            +   +I
Sbjct: 699 WKDVARI 705


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/665 (40%), Positives = 412/665 (61%), Gaps = 2/665 (0%)

Query: 157 RNLVDGKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
           ++   G+++H  ++     E + ++   L   Y   GL + A  +FD + +++S  WN M
Sbjct: 73  KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFM 132

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           I GY  +G  +++L +  EM   G   D  T   +L  C     +  G  +H  +V  GL
Sbjct: 133 IRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGL 192

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           E +++V N+L+ MYAKFG M  A  VFD+M ERD+ SWN++I+ Y ++ D  TA   F  
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDL 252

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M +AG+  D  TL+ L S  A L   +  + +HG+ +R      +    N++++MY    
Sbjct: 253 MGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN 312

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            +  A  +FE +  KD +SWN++I GYA+NG A E++ +F+ M   +   P+Q T++++L
Sbjct: 313 CMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMA-LDGSGPDQVTFIAVL 371

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A   + ALR G+ IH+ ++K     +  V T LVDMY KCG +  +  +F ++P  S V
Sbjct: 372 GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W+A+++ +G+HG+G +A++    M    V PD+  F S+L+ACSH+GLV EG+  F+ M
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           ++E+ +KP L HY CMVDL GRAGHL  A+  I+ M ++P + IW ALL A R+H N++L
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKL 551

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
             +++ ++F+++ + V  Y+ +SNIYA   +W+ V+ VR++ R +GLKK+PG S IE++N
Sbjct: 552 AEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDN 611

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            V  F  G+++H + E IY +L  L  ++K  GY PD S V  DVEE+ KE +L  HSER
Sbjct: 612 MVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSER 671

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAIAF +I++ P + I+I KNLRVCGDCH  TK IS++T REII+RD +RFHHF  G CS
Sbjct: 672 LAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCS 731

Query: 816 CGDYW 820
           CGDYW
Sbjct: 732 CGDYW 736



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/488 (33%), Positives = 265/488 (54%), Gaps = 19/488 (3%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L QS T     K+   LHA ++    ++   + +TKL  FYA  G +S +   FD I  +
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKI 165
           N + WN MI  Y   G   +++   Y+  L  G R D +T+P VLKAC +L+    G+++
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSL-VLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  V+  G E D++V  SLL MY +FG    AR +FD M  RD  SWN MISGY ++ ++
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL-EFNLFVSNN 284
             A  + D M   G+  D  T+  +L  CA    +  G +IH Y V++ +  +N F +N+
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI MY     M  A R+F+++  +D VSWNS+I  Y ++ D   +   F  M   G  PD
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T +++     Q+   R   S+H +++++G F  + I+G A+VDMY+K G +  +  VF
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKKG-FDANTIVGTALVDMYSKCGSLACSRRVF 422

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +P K ++SW+ ++ GY  +G   EAI +   M + N + P+ G + SIL A SH G +
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM-KANSVIPDNGVFTSILSACSHAGLV 481

Query: 465 RQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNA 519
            +G +I  ++ K    ++V  A    +C+VD+ G+ G +D+A  +   +  + +S  W A
Sbjct: 482 VEGKEIFYKMEKE---YNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAA 538

Query: 520 IISCHGIH 527
           +++   +H
Sbjct: 539 LLTASRLH 546



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 195/393 (49%), Gaps = 15/393 (3%)

Query: 40  CLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C    +    +  + ++C  L  V   +R+H+ +VV G    ++    L+  YA  GD+ 
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMG 213

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL--TSGLRPDFYTFPPVLK 154
            +R  FD ++ R++ +WN+MIS Y +    +++   F  F L   +GL  D  T   +L 
Sbjct: 214 TARMVFDRMAERDLTSWNTMISGYAKN---ADSGTAFLVFDLMGKAGLFADCTTLLGLLS 270

Query: 155 ACRNL---VDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
           AC +L    +GK IH   ++     ++ F   SL+ MYC       AR+LF+ +  +D+ 
Sbjct: 271 ACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTV 330

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SWN+MI GY ++G+A E+L +   M L+G   D +T  ++L  C +   +  G+ IH Y+
Sbjct: 331 SWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYL 390

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           VK G + N  V   L++MY+K G +  + RVFD+M ++ +VSW++++A Y        A 
Sbjct: 391 VKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAI 450

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVD 389
                M+   + PD     S+ S  +        + +  + M + + ++  +   + +VD
Sbjct: 451 SILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIF-YKMEKEYNVKPALSHYSCMVD 509

Query: 390 MYAKLGIINSACAVFEGLPVKDVIS-WNTLITG 421
           +  + G ++ A  +   + +K     W  L+T 
Sbjct: 510 LLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA 542



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 4/212 (1%)

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV-SILPAYSHVGALRQGIKIHAR 473
           +N+  + ++Q  +A        M E   +  P       ++L ++++  + +QG ++HA 
Sbjct: 25  YNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAH 84

Query: 474 VIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
           +I  + L  + ++ T L   Y  CG +  A  +F  +   +S  WN +I  +  +G   K
Sbjct: 85  MISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMK 144

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           +L  +R+ML  G R D+ T+  +L AC    LV  G+R  H      G++  +     ++
Sbjct: 145 SLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRR-VHSEVVVCGLESDIYVGNSLL 203

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            ++ + G +G A      M  R D + W  ++
Sbjct: 204 AMYAKFGDMGTARMVFDRMAER-DLTSWNTMI 234


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 284/755 (37%), Positives = 432/755 (57%), Gaps = 19/755 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTF----DHISYRNVYTWNSMISVYVRC--GRLSEAVDC 132
            FS  ++++ Y+  G LS + H F     H+  R+  TW  MI  +      R S+AV  
Sbjct: 66  AFSLNRMLSGYSRSGQLSAAHHLFLSSPPHL--RDAVTWTVMIGAFASAPGARASDAVSL 123

Query: 133 FYQFTLTSGLRPDFYT------FPPVLKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLL 185
           F    L  G+ PD  T       PP        +    +H   LKLG    +V V  +LL
Sbjct: 124 FRDM-LREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLL 182

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
             YC+ GL   AR++F +MP RDS ++NAM+ G  + G+  EALD+   MR +G++    
Sbjct: 183 DAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRF 242

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T +++L V     ++  G  +H  +V      N+FV+N+L++ Y+K   +    ++F +M
Sbjct: 243 TFSTVLTVATGVGDLCLGRQVH-GLVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM 301

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           +ERD VS+N +IA Y  +         F  MQ        L   SL S+   +      +
Sbjct: 302 IERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGK 361

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H  ++  G   ED ++GNA++DMY+K G++++A   F     K  +SW  +ITG  QN
Sbjct: 362 QIHAQLVLLGLSSED-LVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQN 420

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G   EA+++F  M     ++P++ T+ S + A S++  +  G ++H+ +I++     VF 
Sbjct: 421 GQQEEALQLFCGMRRAG-LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFS 479

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            + L+DMY KCG +D+A+  F ++P  +S+ WNA+IS +  +GQ   A+  F  ML  G 
Sbjct: 480 GSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGF 539

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +PD +TF+S+L+ACSH+GL  E  +YF +M+ E+GI P  +HY C++D  GR G      
Sbjct: 540 KPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQ 599

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
             +  MP   D  IW ++L +CR HGN +L  VA+++LF + S +   YV++SNI+A  G
Sbjct: 600 EMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAG 659

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           KWE    V+ + RDRGL+K  G+S +EV +KV  F + ++T+P   +I DEL  L  +M 
Sbjct: 660 KWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMD 719

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             GY PD S  LQ V++D K   L  HSERLAIAF +I++PP +PI++ KNL  C DCH+
Sbjct: 720 KQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHS 779

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             K +S+I  R+IIVRDS+RFHHFKDG CSCGDYW
Sbjct: 780 AIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++LH+ L+ SG + +VFS + L++ Y   G L  +  TFD +  RN  +WN++IS Y   
Sbjct: 462 RQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHY 521

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G+   A+  F +  L  G +PD  TF  VL AC +  +G    C       E++  ++  
Sbjct: 522 GQAKNAIKMF-EGMLCYGFKPDSVTFLSVLSACSH--NGLAEECMKYFELMEYEYGISPW 578

Query: 184 LLHMYC------RFGLANVARKLFDDMPVRDSG-SWNAMISGYCQSGN 224
             H  C      R G  +  +++  +MP  D    W++++      GN
Sbjct: 579 KEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGN 626


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/661 (41%), Positives = 406/661 (61%), Gaps = 8/661 (1%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            + +H   +  G+  D FVA++L  +Y +    + ARK+FD +P  D+  WN +++G   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 222 SGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           S    EAL+    M   G V  D  T+AS L   A + ++  G  +H Y VK GL  +  
Sbjct: 193 S----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V   L+++Y+K G M  A  +FD+M   D+V++N++I+ Y  +    ++   F  +  +G
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            +P+  TLV++  + +       +R +H F+++      D ++  A+  +Y +L  + SA
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVK-ARLDADALVSTALTTLYCRLNDMESA 367

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
            ++F+ +  K + SWN +I+GYAQNGL   A+ +FQ+M+E N + PN  T  S L A +H
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELN-VQPNPITISSTLSACAH 426

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +GAL  G  +H  + K  L  +V+V T L+DMY KCG I +A S+F ++   + V WNA+
Sbjct: 427 LGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAM 486

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS +G+HGQG +AL  ++ MLD  + P   TF+S++ ACSH GLV EGQ+ F +M  E+ 
Sbjct: 487 ISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYR 546

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP-DASIWGALLGACRIHGNMELGAVA 639
           I P ++H  CMVDL GRAG L  A   I   P       +WGALLGAC +H N +L  +A
Sbjct: 547 ITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLA 606

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           S +LFE+DSEN GYYVL+SN+Y +   +     VR  A+ R L KTPG + IE+ ++  +
Sbjct: 607 SQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHV 666

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+  HP+ E IY  L  LTAKM   GY P     L DVEE+EKEH++  HSE+LAIA
Sbjct: 667 FMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIA 726

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++S+ P + I+I KNLRVC DCHN TKFIS++T+R I+VRD++RFHHF+DG+CSCGDY
Sbjct: 727 FGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDY 786

Query: 820 W 820
           W
Sbjct: 787 W 787



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 278/556 (50%), Gaps = 23/556 (4%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            + LH L V +G     F ++ L   Y  L     +R  FD +   +   WN++++    
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
               SEA++ F +      +RPD  T    L+A     ++  G+ +H   +K G      
Sbjct: 193 ----SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V   L+ +Y + G  + A+ LFD M   D  ++NA+ISGY  +G    ++++  E+   G
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              +  T+ +++PV +   + L    +H ++VK  L+ +  VS  L  +Y +   M  A 
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            +FD M+E+ + SWN++I+ Y Q+     A   F  MQ+  +QP+ +T+ S  S  A L 
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                + VH  I +    + +V +  A++DMYAK G I  A ++F+ +  K+V+SWN +I
Sbjct: 429 ALSLGKWVHRIISKEKLEL-NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-- 477
           +GY  +G  +EA+++++ M +   I P   T++S++ A SH G + +G K+  RV+ N  
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDA-RILPTSSTFLSVIYACSHGGLVDEGQKVF-RVMTNEY 545

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP--WNAIISCHGIHGQGDKALN 535
            +   +   TC+VD+ G+ G++++A+ L  + P+S+  P  W A++    +H   D A  
Sbjct: 546 RITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKL 605

Query: 536 FFRQM--LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
             +++  LD      ++   +L T+  H    SE      ++++E   +  +K  GC + 
Sbjct: 606 ASQKLFELDSENAGYYVLLSNLYTSKKH---YSEAA----VVRQEAKTRKLVKTPGCTLI 658

Query: 594 LFGRAGHLGMAHNFIQ 609
             G   H+ MA + + 
Sbjct: 659 EIGDRPHVFMAGDHLH 674


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/722 (38%), Positives = 430/722 (59%), Gaps = 8/722 (1%)

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNL 159
           D  S   +   N  +S Y+  G+ S  + CF    + S +  D  TF  +L       +L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTFILMLATAVKVDSL 331

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G+++HC  LKLG +  + V+ SL++MYC+      AR +FD+M  RD  SWN++I+G 
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFN 278
            Q+G  VEA+ +  ++   G+  D  T+ S+L   +     LS    +H++ +K     +
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FVS  LI+ Y++   M+ A  +F++    D+V+WN+++A Y QS+D       F  M +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G + D  TL ++      L      + VH + ++ G+ + D+ + + ++DMY K G ++
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL-DLWVSSGILDMYVKCGDMS 569

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
           +A   F+ +PV D ++W T+I+G  +NG    A  VF  M     + P++ T  ++  A 
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKAS 628

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           S + AL QG +IHA  +K     D FV T LVDMY KCG IDDA  LF ++   +   WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           A++     HG+G + L  F+QM   G++PD +TF+ +L+ACSHSGLVSE  ++   M  +
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GIKP ++HY C+ D  GRAG +  A N I++M +   AS++  LL ACR+ G+ E G  
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            + +L E++  +   YVL+SN+YA   KW+ +   R++ +   +KK PG+S IEV NK+ 
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
           IF   +R++ + E IY +++++   +K  GYVP+  F L DVEE+EKE  L  HSE+LA+
Sbjct: 869 IFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAV 928

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG++S+PP +PI++ KNLRVCGDCHN  K+I+++  REI++RD+NRFH FKDGICSCGD
Sbjct: 929 AFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGD 988

Query: 819 YW 820
           YW
Sbjct: 989 YW 990



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 244/486 (50%), Gaps = 12/486 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H + +  G    +  S  L+N Y  L    F+R  FD++S R++ +WNS+I+   + 
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVF 179
           G   EAV C +   L  GL+PD YT   VLKA  +L +G    K++H   +K+    D F
Sbjct: 395 GLEVEAV-CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V+ +L+  Y R      A  LF+     D  +WNAM++GY QS +  + L +   M  +G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              D  T+A++   C     I  G  +H Y +K G + +L+VS+ +++MY K G M  A 
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
             FD +   D V+W ++I+   ++ +   A   F+ M+  G+ PD  T+ +L    + L 
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                R +H   ++      D  +G ++VDMYAK G I+ A  +F+ + + ++ +WN ++
Sbjct: 633 ALEQGRQIHANALKLNC-TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 691

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            G AQ+G   E +++F+ M+    I P++ T++ +L A SH G + +  K H R +    
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGLVSEAYK-HMRSMHGDY 749

Query: 480 CFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNF 536
                +   +CL D  G+ G +  A +L   +   +S   +  +++   + G  +     
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809

Query: 537 FRQMLD 542
             ++L+
Sbjct: 810 ATKLLE 815



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 264/580 (45%), Gaps = 53/580 (9%)

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           HA ++   +    F    L++ Y+  G L+++R  FD +  R++ +WNS+++ Y +    
Sbjct: 62  HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121

Query: 127 SEAVDCFYQ-FTLTSGLRPDF-----YTFPPVLKACRN---LVDGKKIHCSVLKLGFEWD 177
              V+   Q F L   LR D       T  P+LK C +   +   +  H    K+G + D
Sbjct: 122 --VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGD 179

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            FVA +L+++Y +FG     + LF++MP RD   WN M+  Y + G   EA+D+      
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            G++ + IT+  +  +    D+  +G            +   F + N             
Sbjct: 240 SGLNPNEITLRLLARISG--DDSDAG------------QVKSFANGN------------- 272

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
                D     +++  N  ++ Y  S         F  M ++ ++ D +T + + +   +
Sbjct: 273 -----DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVK 327

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           ++     + VH   ++ G  +  + + N++++MY KL     A  VF+ +  +D+ISWN+
Sbjct: 328 VDSLALGQQVHCMALKLGLDLM-LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG---ALRQGIKIHARV 474
           +I G AQNGL  EA+ +F  +  C  + P+Q T  S+L A S +    +L + + +HA  
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK 445

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           I N    D FV+T L+D Y +   + +A  LF +      V WNA+++ +     G K L
Sbjct: 446 INN--VSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTL 502

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F  M  +G R D  T  ++   C     +++G++  H    + G    L     ++D+
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-VHAYAIKSGYDLDLWVSSGILDM 561

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           + + G +  A     ++PV PD   W  ++  C  +G  E
Sbjct: 562 YVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEE 600



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 174/387 (44%), Gaps = 42/387 (10%)

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S +++ G   H  I+        F+ NNLI+MY+K G + +A RVFD+M +RD+VSWNSI
Sbjct: 52  SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111

Query: 317 IAAYEQSNDPIT-----AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +AAY QS++ +      A   F  ++Q  +    +TL  +  +         S S HG+ 
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
            + G   ++ + G A+V++Y K G +     +FE +P +DV+ WN ++  Y + G   EA
Sbjct: 172 CKIGLDGDEFVAG-ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           I++         +NPN+ T + +L   S   +    +K  A                   
Sbjct: 231 IDLSSAFHSSG-LNPNEIT-LRLLARISGDDSDAGQVKSFANG----------------- 271

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
                   +DA S+      S  +  N  +S +   GQ    L  F  M++  V  D +T
Sbjct: 272 --------NDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F+ +L        ++ GQ+  H M  + G+   L     +++++ +    G A     NM
Sbjct: 318 FILMLATAVKVDSLALGQQ-VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376

Query: 612 PVRPDASIWGALLGACRIHGNMELGAV 638
             R D   W +++     +G +E+ AV
Sbjct: 377 SER-DLISWNSVIAGIAQNG-LEVEAV 401



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 6/171 (3%)

Query: 56  SC-TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           SC T L   +++HA  +        F  T LV+ YA  G +  +   F  I   N+  WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVL-- 170
           +M+    + G   E +  F Q   + G++PD  TF  VL AC +  LV     H   +  
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
             G + ++   + L     R GL   A  L + M +  S S    +   C+
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 798


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/759 (36%), Positives = 439/759 (57%), Gaps = 10/759 (1%)

Query: 66   LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVRCG 124
            L  L  V   I      +KLV  Y   GD++ +R  FD +S + NV+ WN ++  Y + G
Sbjct: 337  LWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVG 396

Query: 125  RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVA 181
               E++  F Q     G+ PD +    +LK    L    DG   H  ++KLGF     V 
Sbjct: 397  EFEESLSLFVQMH-ELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC 455

Query: 182  ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
             +L+  Y +  +   A  +F+ MP +D+ SWN++ISG   +G   EA+++   M  +G  
Sbjct: 456  NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515

Query: 242  MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            +D +T+ S+LP CA+S    +G ++H Y VK GL     ++N L++MY+     +   ++
Sbjct: 516  LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575

Query: 302  FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
            F  M +++VVSW ++I +Y ++       G    M   GI+PD+  + S     A     
Sbjct: 576  FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESL 635

Query: 362  RNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            +  +SVHG+ +R G  ME ++ + NA+++MY K   +  A  +F+ +  KDVISWNTLI 
Sbjct: 636  KQGKSVHGYTIRNG--MEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIG 693

Query: 421  GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            GY++N   +E+  +F  M    +  PN  T   ILPA + + +L +G +IHA  ++    
Sbjct: 694  GYSRNNFPNESFSLFSDM--LLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFL 751

Query: 481  FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             D + +  LVDMY KCG +  A  LF ++ + + + W  +I+ +G+HG G  A+  F QM
Sbjct: 752  EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
               G+ PD  +F ++L AC HSGL +EG+R+F  MQ+E+ I+P LKHY C+VDL  R G 
Sbjct: 812  RGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGD 871

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A  FI++MP+ PD+SIW +LL  CRIH N++L    +D++F+++ EN GYYVL++NI
Sbjct: 872  LKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANI 931

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            YA   +WE V ++++    RGL++  G+S IEV +KV +F   NR HP + +I + L ++
Sbjct: 932  YAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDV 991

Query: 721  TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              +M+  G+ P K + L   ++   +  L  HS +LA+AFG+++ P   PI++ KN +VC
Sbjct: 992  ARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVC 1051

Query: 781  GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
              CH   KFIS++  REII+RDS+RFH F+ G CSC  Y
Sbjct: 1052 SHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 180/588 (30%), Positives = 281/588 (47%), Gaps = 27/588 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSST----KLVNFYANLGDLSFSRHTFDHISYR--NVYTW 113
           L   KR HAL+  S    T    +    +LV  Y   GDL  +R  FD +  +  +V  W
Sbjct: 113 LEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVW 172

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVL 170
            S++S Y + G   EAV  F Q     G+ PD +    VLK   +L    +G+ IH  + 
Sbjct: 173 TSLMSAYAKAGDFQEAVSLFRQMQCC-GVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLE 231

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           KLG      VA +L+ +Y R G    A ++FD M  RD+ SWN+MI G   +G    A+D
Sbjct: 232 KLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVD 291

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL----------F 280
           +  +M  +G  +  +TV S+LP CA     L G  +H Y VK GL + L           
Sbjct: 292 LFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAA 351

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           + + L+ MY K G M  A RVFD M  + +V  WN I+  Y +  +   +   F  M + 
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHEL 411

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           GI PD   +  L   +  L+  R+    HG+I++ G F     + NA++  YAK  +I  
Sbjct: 412 GIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLG-FGAQCAVCNALISFYAKSNMIGD 470

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAY 458
           A  VF  +P +D ISWN++I+G + NGL SEAIE+F +M  +  E++    T +S+LPA 
Sbjct: 471 AVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSV--TLLSVLPAC 528

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +       G  +H   +K  L  +  +A  L+DMY  C        +F  + + + V W 
Sbjct: 529 AQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWT 588

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           A+I+ +   G  DK     ++M+ +G+RPD     S L A +    + +G +  H     
Sbjct: 589 AMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQG-KSVHGYTIR 647

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G++  L     +++++ +  ++  A   I +     D   W  L+G 
Sbjct: 648 NGMEKLLPVANALMEMYVKCRNVEEAR-LIFDRVTNKDVISWNTLIGG 694



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 7/269 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     L   K +H   + +G  K +  +  L+  Y    ++  +R  FD ++ ++V +W
Sbjct: 629 FAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISW 688

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           N++I  Y R    +E+   F    L    RP+  T   +L A     +L  G++IH   L
Sbjct: 689 NTLIGGYSRNNFPNESFSLFSDMLLQ--FRPNAVTMTCILPAAASISSLERGREIHAYAL 746

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           + GF  D + + +L+ MY + G   VAR LFD +  ++  SW  MI+GY   G    A+ 
Sbjct: 747 RRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIA 806

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMY 289
           + ++MR  G+  D  + ++IL  C  S     G      + K + +E  L     ++++ 
Sbjct: 807 LFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLL 866

Query: 290 AKFGMMRHALRVFDQM-MERDVVSWNSII 317
           ++ G ++ AL   + M +E D   W S++
Sbjct: 867 SRTGDLKEALEFIESMPIEPDSSIWVSLL 895



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 16/173 (9%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S + L   + +HA  +  G ++  ++S  LV+ Y   G L  +R  FD ++ +N+ +W  
Sbjct: 731 SISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTI 790

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           MI+ Y   G    A+  F Q    SG+ PD  +F  +L AC +     +G++   ++ K 
Sbjct: 791 MIAGYGMHGFGKHAIALFEQMR-GSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQK- 848

Query: 173 GFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISG 218
               +  +   L H  C      R G    A +  + MP+  DS  W +++ G
Sbjct: 849 ----EYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHG 897


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 287/777 (36%), Positives = 451/777 (58%), Gaps = 12/777 (1%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + ++C  ++ V+    +H   + +  +  VF    L+  Y   G +  +   FD +  RN
Sbjct: 202 VIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRN 261

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQF-TLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           + +WNS++   +  G   E+   F        GL PD  T   V+  C    +   G   
Sbjct: 262 LVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVF 321

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   LKLG   ++ V +SLL MY + G    AR LFD    ++  SWN+MI GY +  + 
Sbjct: 322 HGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDF 380

Query: 226 VEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSN 283
             A ++L +M++E  V ++ +T+ ++LPVC      L    IH Y ++HG ++ +  V+N
Sbjct: 381 RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVAN 440

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             +  YAK G + +A  VF  M  + V SWN++I  + Q+  P  A   +  M+ +G++P
Sbjct: 441 AFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEP 500

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           DL T+ SL S  A+L      + +HG ++R G F  D  I  ++V +Y + G I  A   
Sbjct: 501 DLFTIASLLSACARLKSLSCGKEIHGSMLRNG-FELDEFICISLVSLYVQCGKILLAKLF 559

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +  K+++ WNT+I G++QN    +A+++F  M   ++I P++ + +  L A S V A
Sbjct: 560 FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS-SKIWPDEISIIGALGACSQVSA 618

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           LR G ++H   +K+ L    FV   L+DMY KCG ++ + ++F +V     V WN +I+ 
Sbjct: 619 LRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITG 678

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +GIHG G KA+  F+ M + G RPD +TF++LLTAC+H+GLV+EG  Y   MQ  FGIKP
Sbjct: 679 YGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKP 738

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            L+HY C+VD+ GRAG L  A   +  +P +PD+ IW +LL +CR + ++++G   +++L
Sbjct: 739 KLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKL 798

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E+  +    YVL+SN YA +GKW+ V ++R   ++ GL+K  G S IE+  KV  F  G
Sbjct: 799 LELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVG 858

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           + +  +  KI      L  K+  +GY PD S VL ++EEDEK  IL +HSE+LAI+FG++
Sbjct: 859 DESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLL 918

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++   + +++ KNLR+C DCHN  K +S+I +REIIVRD+ RFHHFK+G CSCGDYW
Sbjct: 919 NTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 172/594 (28%), Positives = 303/594 (51%), Gaps = 22/594 (3%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L Q C +  ++   +++H  +  S   +  V   T+LV  Y+       S   F+    +
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           N++ WN+++S Y+R     +AV  F +    +   PD +T P V+KAC  + D   G+ +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   LK     DVFV  +L+ MY +FG    A K+FD MP R+  SWN+++    ++G  
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 226 VEALDILDEMRL--EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            E+  +   +    EG+  D  T+ +++P+CAR   +  G++ H   +K GL   L V++
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQ 342
           +L++MY+K G +  A  +FD   E++V+SWNS+I  Y +  D   A      MQ +  ++
Sbjct: 339 SLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            + +TL+++  +  +       + +HG+ +R G+   D ++ NA V  YAK G ++ A  
Sbjct: 398 VNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEG 457

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF G+  K V SWN LI G+ QNG   +A++++ +M   + + P+  T  S+L A + + 
Sbjct: 458 VFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG-SGLEPDLFTIASLLSACARLK 516

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           +L  G +IH  +++N    D F+   LV +Y +CG+I  A   F  +   + V WN +I+
Sbjct: 517 SLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMIN 576

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
               +     AL+ F QML   + PD I+ +  L ACS    +  G+   H     F +K
Sbjct: 577 GFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE-LHC----FAVK 631

Query: 583 PHLKHYG----CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            HL  +      ++D++ + G +  + N    + ++ + + W  L+    IHG+
Sbjct: 632 SHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLITGYGIHGH 684


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 290/765 (37%), Positives = 449/765 (58%), Gaps = 17/765 (2%)

Query: 64  KRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           K+LH L +  G  +  V   T LV+ Y     +   R  F+ +  RNV TW S+++ Y++
Sbjct: 123 KQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQ 182

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKIHCSVLKLGFEWDVF 179
            G LS+ ++ F++     G+ P+  TF  VL   A + +VD G+++H   +K G    VF
Sbjct: 183 DGALSDVMELFFRMR-AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SL++MY + GL   AR +F  M  RD  SWN +++G   +G+ +EAL +  + R   
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSI 301

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             +   T A+++ +CA    +     +H  ++K G      V   L++ Y+K G + +AL
Sbjct: 302 TMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNAL 361

Query: 300 RVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQ 357
            +F  M   ++VVSW ++I    Q+ D   A   F+ M++ G+ P+  T  + LT+ VA 
Sbjct: 362 DIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVAS 421

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L        +H  +++  +     I+G A++  Y+KL     A ++F+ +  KDV+SW+ 
Sbjct: 422 L-----PPQIHAQVIKTNYECTS-IVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSA 475

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHARVIK 476
           ++T YAQ G +  A  +F  M   + + PN+ T  S++ A  S    +  G + HA  IK
Sbjct: 476 MLTCYAQAGDSDGATNIFIKMT-MHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIK 534

Query: 477 NCLCFDVF-VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           +  C D   V++ LV MY + G I+ A  +F +      V WN+++S +  HG   KAL+
Sbjct: 535 H-RCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALD 593

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            FRQM  EG+  D +TF+S++  C+H+GLV EGQRYF  M  ++GI P ++HY CMVDL+
Sbjct: 594 VFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLY 653

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
            RAG L  A + I+ M       +W  LLGAC++H N+ELG +A+++L  ++  +   YV
Sbjct: 654 SRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYV 713

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SNIY+  GKW+  DEVR L   + +KK  G S I++ NKV  F   +++HP  E+IY 
Sbjct: 714 LLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYA 773

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
           +LR +T K+K  GY PD SF L +V E++KE +L  HSERLA+AFG+I++PP +P+ IFK
Sbjct: 774 KLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFK 833

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLRVCGDCH   K +S+I +REI++RD +RFHHF  G+CSCGD+W
Sbjct: 834 NLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 179/619 (28%), Positives = 300/619 (48%), Gaps = 25/619 (4%)

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           T+  S  L N   NL D + +R  FD I +RN  T +  +  + R G + +A+D F    
Sbjct: 38  TLACSVPLEN-QTNLNDATGARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVH 94

Query: 138 LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGL 193
              G R        VLK C ++ D   GK++H   ++ G +  DV V  SL+ MY ++  
Sbjct: 95  RCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHS 154

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
               RK+F+ MP R+  +W ++++GY Q G   + +++   MR EGV  + +T AS+L V
Sbjct: 155 VVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSV 214

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
            A    +  G  +H   VK G    +FV N+L+NMYAK G++  A  VF  M  RD+VSW
Sbjct: 215 VASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSW 274

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N+++A    +   + A   F   + +       T  ++  + A +     +R +H  +++
Sbjct: 275 NTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLK 334

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAI 432
           RG+     ++  A++D Y+K G + +A  +F  +   ++V+SW  +I G  QNG    A 
Sbjct: 335 RGFHSYGNVM-TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAA 393

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  M E + + PN  TY +IL A   V +L    +IHA+VIK        V T L+  
Sbjct: 394 ALFSRMRE-DGVAPNDFTYSTILTA--SVASLPP--QIHAQVIKTNYECTSIVGTALLAS 448

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y K    ++A+S+F  + +   V W+A+++C+   G  D A N F +M   G++P+  T 
Sbjct: 449 YSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTI 508

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            S++ AC+      +  R FH +  +      L     +V ++ R G +  A    +   
Sbjct: 509 SSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQT 568

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG------YYVLMSNIYANVGK 666
            R D   W ++L     HG  +    A D   ++++E +         V+M   +A + +
Sbjct: 569 DR-DLVSWNSMLSGYAQHGYSQ---KALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVE 624

Query: 667 WEGVDEVRSLARDRGLKKT 685
            EG     S+ARD G+  T
Sbjct: 625 -EGQRYFDSMARDYGITPT 642


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 271/621 (43%), Positives = 398/621 (64%), Gaps = 9/621 (1%)

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           D  SWN++I+   +SG++ EAL     MR   +     +    +  C+   +I SG   H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
                 G + ++FVS+ LI MY+  G +  A +VFD++ +RD+VSW S+I  Y+ + + +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159

Query: 328 TAHGFFTTM------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            A   F  +          +  D + LVS+ S  +++     + S+H F+++RG F   V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGV 218

Query: 382 IIGNAVVDMYAKLGIINSACA--VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            +GN ++D YAK G    A A  +F+ +  KD +S+N++++ YAQ+G+++EA EVF+ + 
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           +   +  N  T  ++L A SH GALR G  IH +VI+  L  DV V T ++DMY KCGR+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           + A   F ++   +   W A+I+ +G+HG   KAL  F  M+D GVRP++ITFVS+L AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH+GL  EG R+F+ M+  FG++P L+HYGCMVDL GRAG L  A++ IQ M ++PD+ I
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W +LL ACRIH N+EL  ++  RLFE+DS N GYY+L+S+IYA+ G+W+ V+ VR + ++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGL K PG+S +E+N +V +F  G+  HP+ EKIY+ L  L  K+   GYV + S V  D
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           V+E+EKE  L  HSE+LAIAFGI+++ P S + + KNLRVC DCHN  K IS+I +RE +
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+ RFHHFKDG CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 241/438 (55%), Gaps = 17/438 (3%)

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
           ++   +V++WNS+I+   R G  +EA+  F      S L P   +FP  +KAC +L D  
Sbjct: 35  YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSLFDIF 93

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+ H      G++ D+FV+++L+ MY   G    ARK+FD++P RD  SW +MI GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYD 153

Query: 221 QSGNAVEALDILDEMRL------EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
            +GNA++A+ +  ++ +      + + +D + + S++  C+R         IH +++K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 275 LEFNLFVSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            +  + V N L++ YAK G   +  A ++FDQ++++D VS+NSI++ Y QS     A   
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 333 FTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           F  + +   +  + +TL ++   V+     R  + +H  ++R G   +DVI+G +++DMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMY 332

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K G + +A   F+ +  K+V SW  +I GY  +G A++A+E+F  M +   + PN  T+
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITF 391

Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           VS+L A SH G   +G +  +A   +  +   +    C+VD+ G+ G +  A  L  ++ 
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451

Query: 511 -RSSSVPWNAIISCHGIH 527
            +  S+ W+++++   IH
Sbjct: 452 MKPDSIIWSSLLAACRIH 469



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 188/393 (47%), Gaps = 37/393 (9%)

Query: 55  QSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           ++C+ L  +   K+ H    V G    +F S+ L+  Y+  G L  +R  FD I  R++ 
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIV 143

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTS-----GLRPDFYTFPPVLKAC-RNLVDG--K 163
           +W SMI  Y   G   +AV  F    +        +  D      V+ AC R    G  +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDSGSWNAMISGYCQ 221
            IH  V+K GF+  V V  +LL  Y + G     VARK+FD +  +D  S+N+++S Y Q
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 222 SGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           SG + EA ++   + + + V+ + IT++++L   + S  +  G  IH  +++ GLE ++ 
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  ++I+MY K G +  A + FD+M  ++V SW ++IA Y        A   F  M  +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-----------NAVVD 389
           ++P+ +T VS+ +  +           H  +   GW   + + G             +VD
Sbjct: 384 VRPNYITFVSVLAACS-----------HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           +  + G +  A  + + + +K D I W++L+  
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/658 (41%), Positives = 397/658 (60%), Gaps = 36/658 (5%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           KK+H  +  L    +  +   L+  Y   G   + RK+FD+M  R+   +N MI  Y  +
Sbjct: 38  KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               + L +  EM   G   D  T   +L  C+ S+N+  GLLIH  ++K GL+FNLFV 
Sbjct: 98  HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVG 157

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N LI MY K G +  A RVFD+M+ +DVVSWNS++A Y  +     A      M+  G +
Sbjct: 158 NGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQK 217

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  T+ SL   VA      N+ S +   + +                            
Sbjct: 218 PDGCTMASLMPAVA------NTSSENVLYVEK---------------------------- 243

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F  L  K++ISWN +I  Y +N L ++A++++  ME+C  + P+  T+ S+LPA   + 
Sbjct: 244 IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKC-RVEPDAITFASVLPACGDLS 302

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G +IH  V K  LC ++ +   L+DMY +CG +DDA  +F ++       W ++IS
Sbjct: 303 ALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLIS 362

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+ GQG  A+  F +ML+ G  PD I FV++L+ACSHSGL+ EG+ YF  M +++ I 
Sbjct: 363 AYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRIT 422

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HY C+VDL GRAG +  A+N I+ MP+ P+  +W  LL +CR+  NM++G +A+D 
Sbjct: 423 PRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADN 482

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L ++  E  GYYVL+SNIYA  G+W+ V E+RS+ + + ++KTPG S++E+NN+V  F  
Sbjct: 483 LLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLA 542

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+ +HP+ ++IY+EL  L AKMK LGYVP+    L DVEE++KE  L  HSE+LAI F +
Sbjct: 543 GDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 602

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +++  +  I+I KNLRVCGDCH   K IS+I EREIIVRD+NRFHHFKDG+CSCGDYW
Sbjct: 603 LNT-QEYQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 253/522 (48%), Gaps = 68/522 (13%)

Query: 10  DRRLCKLLPL-LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHA 68
           DR +CK++   +Q     F   A +L  +PD                    +  +K+LH 
Sbjct: 3   DRDICKIITFFIQQILTSFGLLAKALDQNPD--------------------IKTLKKLHT 42

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
           ++      +      KL+  YA  G+   +R  FD +S RNV  +N MI  YV   R  +
Sbjct: 43  MIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDD 102

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
            +  F +  +  G RPD YT+P VLKAC    NL  G  IH  VLK+G ++++FV   L+
Sbjct: 103 GLLVFREM-VNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLI 161

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
            MY + G    AR++FD+M  +D  SWN+M++GY  +    +AL+I  EM   G   D  
Sbjct: 162 AMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGC 221

Query: 246 TVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
           T+AS++P  A   S+N+L                                   +  ++F 
Sbjct: 222 TMASLMPAVANTSSENVL-----------------------------------YVEKIFV 246

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            +  ++++SWN +I  Y +++ P  A   +  M++  ++PD +T  S+      L+    
Sbjct: 247 NLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLL 306

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R +H ++ ++     ++++ N+++DMYA+ G ++ A  VF+ +  +DV SW +LI+ Y 
Sbjct: 307 GRRIHEYVEKKK-LCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYG 365

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
             G    A+ +F  M    +  P+   +V+IL A SH G L +G +I+ + + +      
Sbjct: 366 MTGQGCNAVALFTEMLNSGQA-PDSIAFVAILSACSHSGLLDEG-RIYFKQMTDDYRITP 423

Query: 484 FVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
            +    CLVD+ G+ GR+D+A ++  Q+P   +   W  ++S
Sbjct: 424 RIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLS 465


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 298/802 (37%), Positives = 447/802 (55%), Gaps = 76/802 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG--DLSFSRHTFDHISYRNVY 111
            Q C  +    ++ + +++SG  K  F++++L+ F   L   +++ S   F HI   N +
Sbjct: 33  LQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGF 92

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCS 168
             N+M+  Y++     +A+   Y+F L S +  D YT+P + ++C   +   DGK I   
Sbjct: 93  ICNTMMKGYMQRNSPCKAI-WVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDH 151

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           VLK+GF+ DV++  +L++MY   G  + ARK+FD   V D  SWN+M++GY   GN  EA
Sbjct: 152 VLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEA 211

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            D+ D M                                        E N+  SN++I +
Sbjct: 212 KDVYDRMP---------------------------------------ERNVIASNSMIVL 232

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           + K G +  A ++F++M ++D+VSW+++I+ YEQ+     A   F  M   GI  D + +
Sbjct: 233 FGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVV 292

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRG--------------------------WFME--- 379
           +S+ S  ++L      + VHG +++ G                           F E   
Sbjct: 293 LSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC 352

Query: 380 -DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D I  N+++  Y K G I  A A+F+ +P KD +SW+ +I+GYAQ    +E + +FQ M
Sbjct: 353 LDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM 412

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +      P++   VS++ A +H+ AL QG  IHA + KN L  ++ + T L++MY K G 
Sbjct: 413 Q-IEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGC 471

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++DA+ +F  +       WNA+I    ++G  DK+L  F +M + GV P+ ITFV++L A
Sbjct: 472 VEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGA 531

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           C H GLV EG R+F+ M +E  I P++KHYGCMVDL GRAG L  A   I++MP+ PD S
Sbjct: 532 CRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVS 591

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
            WGALLGAC+ +G+ E G     +L E+  ++ G+ VL+SNIYA+ G W  V EVR + R
Sbjct: 592 TWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMR 651

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
             G+ KTPG S IE + +V  F  G++THP+ E I   L  +  K+K  GY PD   V  
Sbjct: 652 QHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSL 711

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           D++E+EKE  L  HSE+LAIAFG+I+  P +PI+I KNLR+C DCH   K IS+   REI
Sbjct: 712 DIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREI 771

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           +VRD +RFHHFK G CSC DYW
Sbjct: 772 VVRDRHRFHHFKQGSCSCMDYW 793


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/679 (40%), Positives = 408/679 (60%), Gaps = 7/679 (1%)

Query: 147 YTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           +  P VLKAC  +     GK+IH  VLK G + DVFV  +L+ MY        AR +FD 
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M  RD  SW+ MI    ++     AL+++ EM    V    + + S++ + A + N+  G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 264 LLIHLYIVKHGLEFNLFV--SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
             +H Y++++    ++ V  +  L++MYAK G +  A ++F+ + ++ VVSW ++IA   
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +SN        F  MQ+  I P+ +T++SL          +  + +H +I+R G F   +
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG-FSVSL 333

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            +  A+VDMY K   I +A A+F+    +DV+ W  +++ YAQ     +A  +F  M   
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + P + T VS+L   +  GAL  G  +H+ + K  +  D  + T LVDMY KCG I+ 
Sbjct: 394 G-VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 452

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF +        WNAII+   +HG G++AL+ F +M  +GV+P+ ITF+ LL ACSH
Sbjct: 453 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +GLV+EG++ F  M   FG+ P ++HYGCMVDL GRAG L  AH  I++MP++P+  +WG
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           AL+ ACR+H N +LG +A+ +L E++ EN GY VLMSNIYA   +W     VR   +  G
Sbjct: 573 ALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVG 632

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +KK PG S IEVN  V  F  G+++HP+  +I + L  +  K+   GYVPD S VL +++
Sbjct: 633 MKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 692

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E+EKE  LT HSE+LA+AFG+IS+ P +PI+I KNLRVC DCH  TK +S+I  R IIVR
Sbjct: 693 EEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVR 752

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D NRFHHF++G CSCGDYW
Sbjct: 753 DRNRFHHFREGYCSCGDYW 771



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/600 (26%), Positives = 283/600 (47%), Gaps = 33/600 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  ++  G  + VF    L+  Y     + ++R  FD +  R+V +W++MI    R 
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173

Query: 124 GRLSEAVDCFYQFTLTSGLRPD---FYTFPPVLKACRNLVDGKKIHCSVLKLGFE--WDV 178
                A++   +      +RP      +   +     N+  GK +H  V++        V
Sbjct: 174 KEFDMALELIREMNFMQ-VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGV 232

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
               +LL MY + G   +AR+LF+ +  +   SW AMI+G  +S    E   +   M+ E
Sbjct: 233 PTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE 292

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            +  + IT+ S++  C  +  +  G  +H YI+++G   +L ++  L++MY K   +R+A
Sbjct: 293 NIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNA 352

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +FD    RDV+ W ++++AY Q+N    A   F  M+ +G++P  +T+VSL S+ A  
Sbjct: 353 RALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 412

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + VH +I +      D I+  A+VDMYAK G IN+A  +F     +D+  WN +
Sbjct: 413 GALDLGKWVHSYIDKER-VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 471

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN- 477
           ITG+A +G   EA+++F  ME    + PN  T++ +L A SH G + +G K+  +++   
Sbjct: 472 ITGFAMHGYGEEALDIFAEMER-QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 530

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNF 536
            L   +    C+VD+ G+ G +D+A  +   +P + +++ W A+++   +H         
Sbjct: 531 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 590

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
             Q+L+  + P++  +  L+     S + +   R+     +  G++  +K  G    +  
Sbjct: 591 ATQLLE--IEPENCGYNVLM-----SNIYAAANRW----SDAAGVRKTMKTVG----MKK 635

Query: 597 RAGHL-----GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV--ASDRLFEVDSE 649
             GH      G  H F+      P       +L   R   N E G V   S  L  +D E
Sbjct: 636 EPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLN-EAGYVPDTSTVLLNIDEE 694



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 192/396 (48%), Gaps = 11/396 (2%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIK--TVFSSTKLVNFY 89
           N +Q+ P    +E   +   +LF     +   K +HA ++ +   +   V ++T L++ Y
Sbjct: 187 NFMQVRP----SEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 242

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTF 149
           A  G L  +R  F+ ++ + V +W +MI+  +R  RL E    F +      + P+  T 
Sbjct: 243 AKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ-EENIFPNEITM 301

Query: 150 PPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
             ++  C     L  GK++H  +L+ GF   + +A +L+ MY +      AR LFD    
Sbjct: 302 LSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQN 361

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           RD   W AM+S Y Q+    +A ++ D+MR  GV    +T+ S+L +CA +  +  G  +
Sbjct: 362 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWV 421

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H YI K  +E +  ++  L++MYAK G +  A R+F + + RD+  WN+II  +      
Sbjct: 422 HSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYG 481

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M++ G++P+ +T + L    +        + +   ++     +  +     
Sbjct: 482 EEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC 541

Query: 387 VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           +VD+  + G+++ A  + + +P+K + I W  L+  
Sbjct: 542 MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 280/713 (39%), Positives = 417/713 (58%), Gaps = 39/713 (5%)

Query: 144 PDFYTFPPV--LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARK 199
           P     PP+  +K C+++   K+IH   +  G   +  V A ++   C+  L ++  AR 
Sbjct: 15  PSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARM 74

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +FD MP  +   WN MI GY + G    A+ +  EM   GV  D  T   +L    R   
Sbjct: 75  VFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTA 134

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  +H +IVK G   N+FV N LI++Y+  G +  A  VFD+  + DVV+WN +I+ 
Sbjct: 135 VKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISG 194

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           Y +S     +   F  M++  + P  +TLVS+ S  ++L D    + VH ++  +   +E
Sbjct: 195 YNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV--KDLKIE 252

Query: 380 DV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY---AQNGLA------- 428
            V ++ NA++DMYA  G +++A  +F+ +  +DVISW  ++TG+    Q GLA       
Sbjct: 253 PVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKM 312

Query: 429 ---------------------SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
                                 E + +F+ M+  N I P++ T VSIL A +H+GAL  G
Sbjct: 313 PERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN-IKPDEFTMVSILTACAHLGALELG 371

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             I A + KN +  D FV   L+DMY  CG ++ A+ +F  +P    + W A+I    I+
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G++AL+ F QML   + PD +T + +L AC+HSG+V +G+++F  M  + GI+P++ H
Sbjct: 432 GYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAH 491

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           YGCMVDL GRAGHL  AH  I+NMPV+P++ +WG+LLGACR+H + E+  +A+ ++ E++
Sbjct: 492 YGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELE 551

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            EN   YVL+ NIYA   +WE + EVR L  DRG+KKTPG S IE+N  V  F  G++ H
Sbjct: 552 PENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVH 611

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ ++IY +L  ++  +K  GY PD S V  D+ E+EKE  +  HSE+LAIAFG+ISS P
Sbjct: 612 PQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGP 671

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              I+I KNLR+C DCH   K +S++  RE+IVRD  RFHHF+ G CSC DYW
Sbjct: 672 GVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/610 (28%), Positives = 297/610 (48%), Gaps = 65/610 (10%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNV 110
           L ++C  +  +K++H+  + +G I       +++ F     LGD+ ++R  FD +   N 
Sbjct: 25  LIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNH 84

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-----GKKI 165
           + WN+MI  Y R G  + AV  + +  L  G+ PD YT+P +LK  R   D     G+++
Sbjct: 85  FVWNNMIKGYSRVGCPNSAVSMYCEM-LERGVMPDEYTYPFLLK--RFTRDTAVKCGREL 141

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++KLGF  +VFV  +L+H+Y   G  +VAR +FD     D  +WN MISGY +S   
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            E++ + DEM    V    IT+ S+L  C++  ++  G  +H Y+    +E    + N L
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENAL 261

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIA--------------------------- 318
           I+MYA  G M  AL +FD M  RDV+SW +I+                            
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWT 321

Query: 319 ----AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
                Y Q N        F  MQ A I+PD  T+VS+ +  A L        +  +I  +
Sbjct: 322 AMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI-DK 380

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                D  +GNA++DMY   G +  A  +F  +P +D ISW  +I G A NG   EA+++
Sbjct: 381 NEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDM 440

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMY 493
           F  M + + I P++ T + +L A +H G + +G K  AR+  ++ +  +V    C+VD+ 
Sbjct: 441 FSQMLKAS-ITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLL 499

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD---- 548
           G+ G + +A  +   +P + +S+ W +++    +H   + A    +Q+L+  + P+    
Sbjct: 500 GRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILE--LEPENGAV 557

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC-MVDLFGRAGHLGMAHNF 607
           ++   ++  AC+    + E ++   MM    GIK   K  GC ++++ G        H F
Sbjct: 558 YVLLCNIYAACNRWEKLHEVRKL--MMDR--GIK---KTPGCSLIEMNGS------VHEF 604

Query: 608 IQNMPVRPDA 617
           +    V P +
Sbjct: 605 VAGDQVHPQS 614


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/746 (37%), Positives = 430/746 (57%), Gaps = 5/746 (0%)

Query: 78   TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY--Q 135
            +V  +  L++ +++   +  + + FDH++  ++ +WN+MIS Y   G   E++ CF+  +
Sbjct: 981  SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 1040

Query: 136  FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                        +   V  +  NL  G+ IH  V+KLG + +V +  +LL +Y   G + 
Sbjct: 1041 HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 1100

Query: 196  VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
             A  +F  M  RD  SWN+M++ Y Q G  ++ L IL E+   G  M+ +T AS L  C+
Sbjct: 1101 DAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS 1160

Query: 256  RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
              + ++   ++H  I+  G    L V N L+ MY K GMM  A +V   M + D V+WN+
Sbjct: 1161 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 1220

Query: 316  IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC-RNSRSVHGFIMRR 374
            +I  + ++ +P  A   +  +++ GI  + +T+VS+    +  +D  ++   +H  I+  
Sbjct: 1221 LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT 1280

Query: 375  GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
            G F  D  + N+++ MYAK G +NS+  +F+GL  K  I+WN ++   A +G   EA+++
Sbjct: 1281 G-FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 1339

Query: 435  FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
            F  M     +N +Q ++   L A +++  L +G ++H  VIK     D+ V    +DMYG
Sbjct: 1340 FGEMRNVG-VNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 1398

Query: 495  KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
            KCG + D + +  Q    S + WN +IS    HG   KA   F +ML  G +PDH+TFVS
Sbjct: 1399 KCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVS 1458

Query: 555  LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
            LL+AC+H GLV EG  Y+  M  EFG+ P ++H  C++DL GR+G L  A  FI+ MPV 
Sbjct: 1459 LLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVP 1518

Query: 615  PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
            P+   W +LL ACRIHGN+EL    ++ L E+D  +   YVL SN+ A  GKWE V+ +R
Sbjct: 1519 PNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLR 1578

Query: 675  SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
                   +KK P  S +++ +KV  F  G + HP+  +I  +L  L    K  GYVPD S
Sbjct: 1579 KEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTS 1638

Query: 735  FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
            F L D++E++KE+ L +HSERLA+AFG+I++P  S ++IFKNLRVCGDCH+  KF+S I 
Sbjct: 1639 FALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIV 1698

Query: 795  EREIIVRDSNRFHHFKDGICSCGDYW 820
             R+I++RD  RFHHF  G CSCGDYW
Sbjct: 1699 GRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 200/586 (34%), Positives = 317/586 (54%), Gaps = 10/586 (1%)

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLK 171
           S I      GRL+EA+    +   ++  R D   +  +L+ C   +    G  IH  ++ 
Sbjct: 3   SKIQSACNLGRLAEAL----KLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLIT 58

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
            GF  D+ +   L+  Y + G    AR +FD MP R   SW AM+SGY Q+G   +A  +
Sbjct: 59  NGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVL 118

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +MR  GV  +  T  S L  C     +  G+ +   I K     NLFV + L++ ++K
Sbjct: 119 FSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSK 178

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G M  A  +F  MMERDVVSWN++I  Y        +   F +M + G+ PD  TL S+
Sbjct: 179 CGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSV 238

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
               A+      +  +HG I + G+   D++ G  +++ YAK G + SA  + +G+  KD
Sbjct: 239 LRASAEGGGLIIANQIHGIITQLGYGSYDIVTG-LLINAYAKNGSLRSAKDLRKGMLKKD 297

Query: 412 VISWNTLITGYAQNGLAS-EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           + S   LITGYA  G+ S +A+++F+ M + N I  +     S+L   +++ +   G +I
Sbjct: 298 LFSSTALITGYAHEGIYSVDALDLFKEMNQMN-IGMDDVILCSMLNICANLASFALGTQI 356

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           HA  +K    +DV +   L+DMY K G I+DA   F ++   + + W ++IS +  HG G
Sbjct: 357 HAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYG 416

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
             A++ +++M  +G +P+ +TF+SLL ACSH+GL +EG   F+ M  ++ IKP  +HY C
Sbjct: 417 HMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSC 476

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVDLF R G L  A+N +  + ++ +AS+WGA+LGA  I+G M LG  A+  LF +  EN
Sbjct: 477 MVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPEN 536

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
              YV++++IY+  G W+   ++R L  +R  KK  G+S  +   K
Sbjct: 537 SVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK 582



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 309/584 (52%), Gaps = 12/584 (2%)

Query: 54   FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
            F   T     K LHA  +V      +F +  L+N Y+  G++  +R+ FD + +RN  +W
Sbjct: 754  FSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 813

Query: 114  NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSV 169
            ++M+S YVR G   EAV  F Q     G+ P+ +    ++ AC        +G ++H  V
Sbjct: 814  STMLSGYVRVGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 872

Query: 170  LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
            +K G   DV+V  +L+H Y   GL   A+KLF++MP  +  SW +++ GY  SGN  E L
Sbjct: 873  VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVL 932

Query: 230  DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            ++   MR EGVS +  T A++   C   ++ + G  +  +I+++G E ++ V+N+LI+M+
Sbjct: 933  NVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMF 992

Query: 290  AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            + F  +  A  VFD M E D++SWN++I+AY        +   F  M+    + +  TL 
Sbjct: 993  SSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLS 1052

Query: 350  SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            SL S+ + +++ +  R +HG +++ G    +V I N ++ +Y++ G    A  VF+ +  
Sbjct: 1053 SLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 1111

Query: 410  KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            +D+ISWN+++  Y Q+G   + +++   + +  ++  N  T+ S L A S+   L +   
Sbjct: 1112 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV-MNHVTFASALAACSNPECLIESKI 1170

Query: 470  IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
            +HA +I       + V   LV MYGK G + +A  +   +P+   V WNA+I  H  + +
Sbjct: 1171 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE 1230

Query: 530  GDKALNFFRQMLDEGVRPDHITFVSLLTACSH-SGLVSEGQR-YFHMMQEEFGIKPHLKH 587
             ++A+  ++ + ++G+  ++IT VS+L ACS    L+  G   + H++   F    ++K+
Sbjct: 1231 PNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN 1290

Query: 588  YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               ++ ++ + G L  + N+I +         W A++ A   HG
Sbjct: 1291 --SLITMYAKCGDLN-SSNYIFDGLGNKSPITWNAMVAANAHHG 1331



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 168/594 (28%), Positives = 286/594 (48%), Gaps = 51/594 (8%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHH 62
           ++  +C   RL + L LL ++ P     +  L+I   C++ +++            K  H
Sbjct: 4   KIQSACNLGRLAEALKLLSSN-PTRLDPSLYLKILQLCIDKKAK------------KQGH 50

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +  +H  L+ +G    +  +TKL+ FY  +GD+  +R+ FD +  R+V +W +M+S Y +
Sbjct: 51  L--IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
            GR  +A   F       G++ + +T+   L+AC   R L  G ++   + K  F  ++F
Sbjct: 109 NGRFEKAFVLFSDMR-HCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLF 167

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V ++L+  + + G    A  LF  M  RD  SWNAMI GY   G A ++  +   M   G
Sbjct: 168 VKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGG 227

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +  D  T+ S+L   A    ++    IH  I + G      V+  LIN YAK G +R A 
Sbjct: 228 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 287

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +   M+++D+ S  ++I  Y       + A   F  M Q  I  D + L S+ +I A L
Sbjct: 288 DLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANL 347

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                   +H F ++      DV +GNA++DMYAK G I  A   F+ +  K+VISW +L
Sbjct: 348 ASFALGTQIHAFALKY-QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 406

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+GYA++G    A+ +++ ME      PN  T++S+L A SH G   +G          C
Sbjct: 407 ISGYAKHGYGHMAVSLYKKMES-KGFKPNDVTFLSLLFACSHTGLTAEG----------C 455

Query: 479 LCFDVFVA-----------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGI 526
            CF+  V            +C+VD++ + G +++A +L  ++  + ++  W AI+    I
Sbjct: 456 ECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSI 515

Query: 527 HGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +G    G +A +    M  E    + + +V L +  S +GL  +  +   +M+E
Sbjct: 516 YGYMSLGKEAASNLFNMQPE----NSVNYVVLASIYSAAGLWDDAWKIRKLMEE 565



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 12/268 (4%)

Query: 60   LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            L H   +HA +V++G     +    L+  YA  GDL+ S + FD +  ++  TWN+M++ 
Sbjct: 1267 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 1326

Query: 120  YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
                G   EA+  F +     G+  D ++F   L A  NL    +G+++H  V+KLGFE 
Sbjct: 1327 NAHHGCGEEALKIFGEMR-NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFES 1385

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D+ V  + + MY + G  +   K+      R   SWN +IS + + G   +A +   EM 
Sbjct: 1386 DLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEML 1445

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKF 292
              G   D +T  S+L  C     +  GL  +  + +   EF +F        +I++  + 
Sbjct: 1446 KLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIIDLLGRS 1502

Query: 293  GMMRHALRVFDQM-MERDVVSWNSIIAA 319
            G + HA     +M +  + ++W S++AA
Sbjct: 1503 GRLSHAEGFIKEMPVPPNDLAWRSLLAA 1530



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 1/178 (0%)

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L  +S + +   G  +HA  I   +   +F    L++MY K G I+ A  +F ++   + 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
             W+ ++S +   G  ++A+  F QM   GV P+     SL+TACS SG +++     H 
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
              + GI   +     +V  +G  G +  A    + MP     S W +L+      GN
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS-WTSLMVGYSDSGN 927


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 270/621 (43%), Positives = 398/621 (64%), Gaps = 9/621 (1%)

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           D  SWN++I+   +SG++ EAL     MR   +     +    +  C+   +I SG   H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
                 G + ++FVS+ LI MY+  G +  A +VFD++ +R++VSW S+I  Y+ + + +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 328 TAHGFFTTM------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            A   F  +          +  D + LVS+ S  +++     + S+H F+++RG F   V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGV 218

Query: 382 IIGNAVVDMYAKLGIINSACA--VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            +GN ++D YAK G    A A  +F+ +  KD +S+N++++ YAQ+G+++EA EVF+ + 
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           +   +  N  T  ++L A SH GALR G  IH +VI+  L  DV V T ++DMY KCGR+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           + A   F ++   +   W A+I+ +G+HG   KAL  F  M+D GVRP++ITFVS+L AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH+GL  EG R+F+ M+  FG++P L+HYGCMVDL GRAG L  A++ IQ M ++PD+ I
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W +LL ACRIH N+EL  ++  RLFE+DS N GYY+L+S+IYA+ G+W+ V+ VR + ++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGL K PG+S +E+N +V +F  G+  HP+ EKIY+ L  L  K+   GYV + S V  D
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           V+E+EKE  L  HSE+LAIAFGI+++ P S + + KNLRVC DCHN  K IS+I +RE +
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+ RFHHFKDG CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 241/438 (55%), Gaps = 17/438 (3%)

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
           ++   +V++WNS+I+   R G  +EA+  F      S L P   +FP  +KAC +L D  
Sbjct: 35  YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSLFDIF 93

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+ H      G++ D+FV+++L+ MY   G    ARK+FD++P R+  SW +MI GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 221 QSGNAVEALDILDEMRL------EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
            +GNA++A+ +  ++ +      + + +D + + S++  C+R         IH +++K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 275 LEFNLFVSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            +  + V N L++ YAK G   +  A ++FDQ++++D VS+NSI++ Y QS     A   
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 333 FTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           F  + +   +  + +TL ++   V+     R  + +H  ++R G   +DVI+G +++DMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMY 332

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K G + +A   F+ +  K+V SW  +I GY  +G A++A+E+F  M +   + PN  T+
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITF 391

Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           VS+L A SH G   +G +  +A   +  +   +    C+VD+ G+ G +  A  L  ++ 
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451

Query: 511 -RSSSVPWNAIISCHGIH 527
            +  S+ W+++++   IH
Sbjct: 452 MKPDSIIWSSLLAACRIH 469



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 37/393 (9%)

Query: 55  QSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           ++C+ L  +   K+ H    V G    +F S+ L+  Y+  G L  +R  FD I  RN+ 
Sbjct: 84  KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTS-----GLRPDFYTFPPVLKAC-RNLVDG--K 163
           +W SMI  Y   G   +AV  F    +        +  D      V+ AC R    G  +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDSGSWNAMISGYCQ 221
            IH  V+K GF+  V V  +LL  Y + G     VARK+FD +  +D  S+N+++S Y Q
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 222 SGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           SG + EA ++   + + + V+ + IT++++L   + S  +  G  IH  +++ GLE ++ 
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  ++I+MY K G +  A + FD+M  ++V SW ++IA Y        A   F  M  +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-----------NAVVD 389
           ++P+ +T VS+ +  +           H  +   GW   + + G             +VD
Sbjct: 384 VRPNYITFVSVLAACS-----------HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           +  + G +  A  + + + +K D I W++L+  
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 282/761 (37%), Positives = 443/761 (58%), Gaps = 11/761 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY--RNVYTWNSMISVYVRC 123
           +H L V  G  K+   +  L+  YA  G L  +   F+ +    R+V +WNS++S  V+ 
Sbjct: 186 VHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQN 245

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
           GR  EA+  F     ++G   + YT   VL+ C  L     G+++H ++LK G E ++  
Sbjct: 246 GRTLEALALFRGMQ-SAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC 304

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            A LL MY ++G  + A ++F  +  +D  SWN+M+S Y Q+    EA+D   EM   G 
Sbjct: 305 NA-LLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGF 363

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D   V S+         + +G   H Y +K  L  +L V N L++MY K G +  + +
Sbjct: 364 QPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAK 423

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+ M  RD +SW +I+A + QS+    A      +Q+ GI  D + + S+      L  
Sbjct: 424 VFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKS 483

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + VH + +R G    D+I+ N ++D+Y + G  + +  +F+ +  KD++SW ++I 
Sbjct: 484 ISLLKQVHCYAIRNGLL--DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMIN 541

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
               NG  + A+ +F  M++ N I P+    VSIL A + + +L +G ++H  +I+    
Sbjct: 542 CCTNNGRLNGAVFLFTEMQKAN-IQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFP 600

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            +  V + LVDMY  CG ++ A+ +F +      V W A+I+  G+HG G +A++ F++M
Sbjct: 601 IEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRM 660

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           L  G+ PDH++F++LL ACSHS LV EG+ Y  +M  ++ +KP  +HY C+VD+ GR+G 
Sbjct: 661 LQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQ 720

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
              A+ FI+ MP+ P +++W ALLGACR+H N  L  VA+++L E++ +N G Y+L+SN+
Sbjct: 721 TEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNV 780

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           +A +GKW    E R+   +RGL+K P  S IE+ N +  F +G+  H   E I+ +L  +
Sbjct: 781 FAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEI 840

Query: 721 TAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           T  + +  GYV D  FVL D  E+EK  +L  HSER+AIAFG+IS+ P  PI+I KNLRV
Sbjct: 841 TEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRV 900

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCH +TK +S++ ER+I+VRD+NRFHHF  G CSC D+W
Sbjct: 901 CGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 194/641 (30%), Positives = 332/641 (51%), Gaps = 32/641 (4%)

Query: 5   APSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK 64
           + S   +RLCK   L QA R L + A       P   E+    +D   L  +       +
Sbjct: 28  SASASLKRLCKEGDLRQALRQLTTRA-------PPAREHYGWVLD---LVAARRAAAEGR 77

Query: 65  RLHALLVVSGKIKT---VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           ++HA  V +G +      F +TKLV  Y   G +  +R  F+ +  R V++WN+++  Y+
Sbjct: 78  QVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYL 137

Query: 122 RCGRLSEAVDCF--YQFTLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEW 176
             G   EA+  +   + +   G  PD  T   VLKAC    DG+   ++H   +K+G + 
Sbjct: 138 SSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDK 197

Query: 177 DVFVAASLLHMYCRFGLANVARKLFD--DMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
              VA +L+ MY + GL + A ++F+      RD  SWN+++SG  Q+G  +EAL +   
Sbjct: 198 STLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRG 257

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M+  G  M+  T  ++L VCA    +  G  +H  ++K G E N+   N L+ MYAK+G 
Sbjct: 258 MQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI-QCNALLVMYAKYGR 316

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  ALRVF Q+ E+D +SWNS+++ Y Q++    A  FF  M Q G QPD   +VSL+S 
Sbjct: 317 VDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSA 376

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           +  L+   N R  H + +++     D+ +GN ++DMY K G I  +  VFE + ++D IS
Sbjct: 377 LGHLSRLNNGREFHAYAIKQ-RLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHIS 435

Query: 415 WNTLITGYAQNGLASEAIE-VFQMMEECNEINPNQ-GTYVSILPAYSHVGALRQGIKIHA 472
           W T++  +AQ+   SEA+E + ++ +E   ++    G+ +        +  L+Q   +H 
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQ---VHC 492

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
             I+N L  D+ +   L+D+YG+CG  D +++LF +V +   V W ++I+C   +G+ + 
Sbjct: 493 YAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNG 551

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSH-SGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           A+  F +M    ++PD +  VS+L A +  S L    Q +  +++  F I+  +     +
Sbjct: 552 AVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV--VSSL 609

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           VD++   G +  A    +    + D  +W A++ A  +HG+
Sbjct: 610 VDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMHGH 649



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 249/491 (50%), Gaps = 25/491 (5%)

Query: 161 DGKKIHCSVLKLGF---EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +G+++H   +  G    + D F+A  L+ MY R G  + AR+LF+ MP R   SWNA++ 
Sbjct: 75  EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134

Query: 218 GYCQSGNAVEALDILDEMRLE---GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
            Y  SG+A EA+ +   MR     G + D  T+AS+L  C    +   G  +H   VK G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAAYEQSNDPITAHGF 332
           L+ +  V+N LI MYAK G++  ALRVF+ + +  RDV SWNS+++   Q+   + A   
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  MQ AG   +  T V++  + A+L      R +H  +++ G   E  I  NA++ MYA
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG--SELNIQCNALLVMYA 312

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G ++SA  VF  +  KD ISWN++++ Y QN   +EAI+ F  M + +   P+    V
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQ-HGFQPDHACVV 371

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+  A  H+  L  G + HA  IK  L  D+ V   L+DMY KCG I+ +  +F  +   
Sbjct: 372 SLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR 431

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             + W  I++C     +  +AL    ++  EG+  D +   S+L  C        G +  
Sbjct: 432 DHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCC-------GLKSI 484

Query: 573 HMMQEE--FGIKPHLKHY---GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
            ++++   + I+  L        ++D++G  G    + N  Q +  + D   W +++  C
Sbjct: 485 SLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCC 543

Query: 628 RIHGNMELGAV 638
             +G +  GAV
Sbjct: 544 TNNGRLN-GAV 553


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 290/793 (36%), Positives = 456/793 (57%), Gaps = 18/793 (2%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
           ++SPD       +  F  + ++C  L   +    ++  ++  G    ++    LV+ Y+ 
Sbjct: 101 KVSPD-------KYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSR 153

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
           +G LS +R  FD +  R++ +WNS+IS Y   G   EA++ +++    S + PD +T   
Sbjct: 154 MGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELR-NSWIVPDSFTVSS 212

Query: 152 VLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           VL A  NL+    G+ +H   LK G      V   LL MY +F     AR++FD+M VRD
Sbjct: 213 VLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRD 272

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S ++N MI GY +     E++ +  E  L+    D +TV S+L  C    ++     I+ 
Sbjct: 273 SVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYN 331

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           Y+++ G      V N LI++YAK G M  A  VF+ M  +D VSWNSII+ Y QS D + 
Sbjct: 332 YMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME 391

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M     Q D +T + L S+  +L D +  + +H   ++ G ++ D+ + NA++
Sbjct: 392 AMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYI-DLSVSNALI 450

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G +  +  +F  +   D ++WNT+I+   + G  +  ++V   M + N++ P+ 
Sbjct: 451 DMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRK-NKVVPDM 509

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T++  LP  + + A R G +IH  +++     ++ +   L++MY KCG ++ +  +F +
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFER 569

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           + R   V W  +I  +G++G+G+KAL  F  M   G+ PD + F++L+ ACSHSGLV +G
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKG 629

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
              F  M+  + I P ++HY C+VDL  R+  +  A  FIQ MP+ PDASIW ++L ACR
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACR 689

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
             G+ME     S R+ E++ ++ GY +L SN YA + KW+ V  +R   RD+ +KK PG+
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGY 749

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV-EEDEKEH 747
           S IE+  KV +F +G+ + P+ E I+  L  L + M   GY+PD   V Q++ EE+EK  
Sbjct: 750 SWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRR 809

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           ++  HSERLAIAFG++++ P +P+Q+ KNLRVC DCH  TK IS+I  REI+VRD+NRFH
Sbjct: 810 LICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFH 869

Query: 808 HFKDGICSCGDYW 820
            FKDGICSC D W
Sbjct: 870 LFKDGICSCKDRW 882



 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 191/588 (32%), Positives = 317/588 (53%), Gaps = 16/588 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYT 112
             S + L+ ++R+HAL++  G   + F S KL++ Y++    + S   F  +S  +NVY 
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYI 73

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WNS+I  + + G   +A++ FY     S + PD YTFP V+KAC  L D   G  ++  +
Sbjct: 74  WNSIIRAFSKNGWFPKALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQI 132

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           L++GFE D++V  +L+ MY R GL + AR++FD+MPVRD  SWN++ISGY   G   EAL
Sbjct: 133 LEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +I  E+R   +  D  TV+S+LP  A    +  G  +H + +K G+     V+N L+ MY
Sbjct: 193 EIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMY 252

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFTTMQQAGIQPDLL 346
            KF     A RVFD+M+ RD V++N++I  Y   E   + +    F   + Q   +PD+L
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKM--FLENLDQ--FKPDIL 308

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+      L D   ++ ++ +++R G+ +E   + N ++D+YAK G + +A  VF  
Sbjct: 309 TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLEST-VKNILIDVYAKCGDMITARDVFNS 367

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  KD +SWN++I+GY Q+G   EA+++F+MM    E   +  TY+ ++   + +  L+ 
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISLSTRLADLKF 426

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  +H+  IK+ +  D+ V+  L+DMY KCG + D++ +F  +    +V WN +IS    
Sbjct: 427 GKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVR 486

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
            G     L    QM    V PD  TF+  L  C+       G+   H     FG +  L+
Sbjct: 487 FGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKE-IHCCLLRFGYESELQ 545

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
               +++++ + G L  +    + M  R D   W  ++ A  ++G  E
Sbjct: 546 IGNALIEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYGEGE 592



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 243/485 (50%), Gaps = 6/485 (1%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGS 211
           L +  NL + ++IH  V+ LG +   F +  L+  Y  F     +  +F  + P ++   
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYI 73

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN++I  + ++G   +AL+   ++R   VS D  T  S++  CA   +   G L++  I+
Sbjct: 74  WNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQIL 133

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           + G E +L+V N L++MY++ G++  A +VFD+M  RD+VSWNS+I+ Y        A  
Sbjct: 134 EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            +  ++ + I PD  T+ S+    A L   +  + +HGF ++ G      ++ N ++ MY
Sbjct: 194 IYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSG-VNSVSVVNNGLLAMY 252

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K      A  VF+ + V+D +++NT+I GY +  +  E++++F  +E  ++  P+  T 
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF--LENLDQFKPDILTV 310

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+L A  H+  L     I+  +++     +  V   L+D+Y KCG +  A  +F  +  
Sbjct: 311 TSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMEC 370

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
             +V WN+IIS +   G   +A+  F+ M+    + DHIT++ L++  +    +  G+  
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKG- 429

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    + GI   L     ++D++ + G +G +     +M    D   W  ++ AC   G
Sbjct: 430 LHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTL-DTVTWNTVISACVRFG 488

Query: 632 NMELG 636
           +   G
Sbjct: 489 DFATG 493



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 223/418 (53%), Gaps = 10/418 (2%)

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           ++ A I    + S N+     IH  ++  GL+ + F S  LI+ Y+ F     +L VF +
Sbjct: 5   VSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRR 64

Query: 305 MM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           +   ++V  WNSII A+ ++     A  F+  ++++ + PD  T  S+    A L D   
Sbjct: 65  VSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
              V+  I+  G F  D+ +GNA+VDMY+++G+++ A  VF+ +PV+D++SWN+LI+GY+
Sbjct: 125 GDLVYKQILEMG-FESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYS 183

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            +G   EA+E++  +   + I P+  T  S+LPA++++  ++QG  +H   +K+ +    
Sbjct: 184 SHGYYEEALEIYHELRN-SWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVS 242

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            V   L+ MY K  R  DA  +F ++    SV +N +I  +      ++++  F + LD+
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ 302

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             +PD +T  S+L AC H   +S  +  Y +M++  F ++  +K+   ++D++ + G + 
Sbjct: 303 -FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKN--ILIDVYAKCGDMI 359

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNM--ELGAVASDRLFEVDSENVGYYVLMS 658
            A +   +M  + D   W +++      G++   +       + E  ++++ Y +L+S
Sbjct: 360 TARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/766 (36%), Positives = 440/766 (57%), Gaps = 12/766 (1%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           C  L   K++HA     G +  +F  + LV+ YA  G++  +   F  +  +N  TWN +
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVL 285

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
           ++ Y + G ++  +  F    +   ++ + +T   VLK C   +NL  G+ IH  ++K G
Sbjct: 286 LNGYAQRGDVTGVLKLFCSM-MELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG 344

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           +E + F+   L+ MY + GLA  A  +F  +   D   W+A+I+   Q G + E++ +  
Sbjct: 345 YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH 404

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            MRL     +  T+ S+L     + N+  G  IH  + K+G E ++ VSN L+ MY K G
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQS---NDPITAHGFFTTMQQAGIQPDLLTLVS 350
            +    ++++ M++RD++SWN+ ++        + P+T    F  M + G  P++ T +S
Sbjct: 465 CVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLT---IFYHMLEEGFIPNMYTFIS 521

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +    + L D    R VH  I++     ++  +  A++DMYAK   +  A   F  L V+
Sbjct: 522 ILGSCSCLFDVHYGRQVHAHIIKNQ-LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D+ +W  +IT YAQ     +A+  F+ M++   + PN+ T    L   S + +L  G ++
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQ-EGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H+ V K+    D+FV + LVDMY KCG +++A +LF  + R  ++ WN II  +  +GQG
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           +KAL  FR MLDEG+ PD +TF  +L+ACSH GLV EG+ +F+ M  +FGI P + H  C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVD+ GR G      +FIQ M +  +A IW  +LGA ++H N+ LG  A+++LFE+  E 
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              Y+L+SNI+A  G+W+ V  VRSL   +G+KK PG S +E N +V  F + + +HP+ 
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQI 879

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           ++I+ +L  L  ++ S+ YVP   +VL +V E EK+  L  HSERLA+ F +IS+  +  
Sbjct: 880 QEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKK 939

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           I+IFKNLR+C DCH+  K IS IT +EI+VRD  RFHHFK+G CSC
Sbjct: 940 IRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 301/606 (49%), Gaps = 10/606 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           LVN YA     +++R     +  R+V +W ++I   V  G  ++++  F +     G+ P
Sbjct: 153 LVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ-NEGIMP 211

Query: 145 DFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           + +T    LKAC     L  GK++H    KLG   D+FV ++L+ +Y + G   +A K+F
Sbjct: 212 NEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMF 271

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
             MP ++  +WN +++GY Q G+    L +   M    V  +  T+ ++L  CA S N+ 
Sbjct: 272 IGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G +IH  I+K G E N F+   L++MY+K G+   A+ VF  + + D+V W+++I   +
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q      +   F  M+     P+  T+ SL S      + +  +S+H  + + G F  DV
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG-FETDV 450

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            + NA+V MY K G ++    ++E +  +D+ISWN  ++G    G+    + +F  M E 
Sbjct: 451 AVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE 510

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             I PN  T++SIL + S +  +  G ++HA +IKN L  + FV T L+DMY KC  ++D
Sbjct: 511 GFI-PNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLED 569

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A   F ++       W  II+ +    QG+KALN+FRQM  EGV+P+  T    L+ CS 
Sbjct: 570 ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
              +  GQ+  H M  + G    +     +VD++ + G +  A    + + +R D   W 
Sbjct: 630 LASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWN 687

Query: 622 ALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
            ++     +G       A   + +  +  + V +  ++S         EG +   S+ RD
Sbjct: 688 TIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRD 747

Query: 680 RGLKKT 685
            G+  T
Sbjct: 748 FGISPT 753



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 219/417 (52%), Gaps = 9/417 (2%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +L+ C   R+L   K IH  ++K     D  +  SL+++Y +   +  AR +   MP
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            RD  SW A+I G    G A +++ +  EM+ EG+  +  T+A+ L  C+    +  G  
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H    K GL  +LFV + L+++YAK G +  A ++F  M E++ V+WN ++  Y Q  D
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
                  F +M +  ++ +  TL ++    A   + +  + +H  I++ G +  +  IG 
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCG-YEGNEFIGC 353

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            +VDMY+K G+   A  VF+ +   D++ W+ LIT   Q G + E+I++F +M   + + 
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTL- 412

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PNQ T  S+L A ++ G L+ G  IHA V K     DV V+  LV MY K G + D   L
Sbjct: 413 PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 506 FYQVPRSSSVPWNAIISCHGIH--GQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +  +     + WNA +S  G+H  G  D+ L  F  ML+EG  P+  TF+S+L +CS
Sbjct: 473 YESMVDRDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   ++LH+++  SG +  +F  + LV+ YA  G +  +   F+ +  R+   WN+
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNT 688

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVDGKKIH 166
           +I  Y + G+ ++A+  F +  L  G+ PD  TF  +L AC  + LV+  K H
Sbjct: 689 IICGYAQNGQGNKALTAF-RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEH 740


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 271/718 (37%), Positives = 429/718 (59%), Gaps = 10/718 (1%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK-----ACRNLVDG 162
           RN  ++ ++I  YV+  +L E VD F +     G   + + F  +LK      C  L   
Sbjct: 4   RNTVSFVTLIQGYVQSFQLDEVVDLFSRVH-REGHELNPFVFTTILKLLVSVECAEL--A 60

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
             +H  + KLG E + FV  +L+  Y   G  N AR+ FD +  +D  SW  M++ Y ++
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               ++L +  EMR+ G + +  T A +L  C   +    G  +H  ++K   E +L+V 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             L+++Y KFG     LRVF++M + DV+ W+ +I+ Y QSN    A   F  M++A + 
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+  T  S+    A + + +  + VH  +++ G    +V + NA++D+YAK G ++++  
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVG-LDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F  LP ++ ++WNT+I GY Q+G   +A+ +++ M EC ++  ++ TY S+L A + + 
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLEC-QVQASEVTYSSVLRACASLA 358

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           A+  G +IH+  +K     DV V   L+DMY KCG I +A  +F  +     + WNA+IS
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            + +HG   +AL  F+ M +    P+ +TFVS+L+ACS++GL+  GQ YF  M +++GI+
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HY CMV L GR+GHL  A   I+ +P+ P+  +W ALLGAC IH +++LG +++ +
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQ 538

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + ++D ++   +VL+SNIYA   +W  V  VR   +++G+KK PG S IE    V  F  
Sbjct: 539 ILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+ +HP  + I   L  L  K +  GYVPD + VL+DVE+DEK+  L  HSERLA+AFG+
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGL 658

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I +P +  I+I KNLR+C DCH+  K IS+I +R+II+RD NRFHHF+DGICSCGDYW
Sbjct: 659 IRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 167/492 (33%), Positives = 276/492 (56%), Gaps = 14/492 (2%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           C +L +   LHA +   G     F  T L++ YA  G ++ +R  FD I+ +++ +W  M
Sbjct: 56  CAELAY--SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGM 113

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLG 173
           ++ Y    R  +++  F +  +  G  P+ +TF  VLKAC  L     GK +H  VLK  
Sbjct: 114 VACYAENDRFQDSLQLFAEMRMV-GFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTC 172

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           +E D++V   LL +Y +FG AN   ++F++MP  D   W+ MIS Y QS  + EA+++  
Sbjct: 173 YEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG 232

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           +MR   V  +  T AS+L  CA  +N+  G  +H +++K GL+ N+FVSN L+++YAK G
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG 292

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            + +++++F ++  R+ V+WN++I  Y QS D   A   +  M +  +Q   +T  S+  
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L        +H   ++   + +DV++GNA++DMYAK G I +A  VF+ L  +D I
Sbjct: 353 ACASLAAMELGTQIHSLSLKT-IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEI 411

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SWN +I+GY+ +GL  EA++ FQMM+E  E  PN+ T+VSIL A S+ G L  G      
Sbjct: 412 SWNAMISGYSMHGLVGEALKAFQMMQE-TECVPNKLTFVSILSACSNAGLLDIGQNYFKS 470

Query: 474 VIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
           ++++     C + +  TC+V + G+ G +D A+ L  ++P   +V  W A++    IH  
Sbjct: 471 MVQDYGIEPCMEHY--TCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHND 528

Query: 530 GDKALNFFRQML 541
            D  +   +Q+L
Sbjct: 529 VDLGIMSAQQIL 540



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 246/482 (51%), Gaps = 6/482 (1%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           MP R++ S+  +I GY QS    E +D+   +  EG  ++P    +IL +    +     
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +H  I K G E N FV   LI+ YA  G +  A + FD +  +D+VSW  ++A Y ++
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
           +    +   F  M+  G  P+  T   +      L      +SVHG +++  + M D+ +
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM-DLYV 179

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           G  ++D+Y K G  N    VFE +P  DVI W+ +I+ YAQ+  + EA+E+F  M     
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF- 238

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PNQ T+ S+L + + +  L+ G ++H  V+K  L  +VFV+  L+D+Y KCGR+D++M
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            LF ++P  + V WN +I  +   G GDKAL+ ++ ML+  V+   +T+ S+L AC+   
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            +  G +  H +  +      +     ++D++ + G +  A   + +M    D   W A+
Sbjct: 359 AMELGTQ-IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR-LVFDMLSERDEISWNAM 416

Query: 624 LGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWE-GVDEVRSLARDRG 681
           +    +HG +     A   + E +   N   +V + +  +N G  + G +  +S+ +D G
Sbjct: 417 ISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYG 476

Query: 682 LK 683
           ++
Sbjct: 477 IE 478



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 163/338 (48%), Gaps = 12/338 (3%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  + QSC  + ++   K++H  ++  G    VF S  L++ YA  G L  S   F 
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFM 302

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +  RN  TWN+MI  YV+ G   +A+   Y+  L   ++    T+  VL+AC +L    
Sbjct: 303 ELPNRNEVTWNTMIVGYVQSGDGDKALS-LYKNMLECQVQASEVTYSSVLRACASLAAME 361

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G +IH   LK  ++ DV V  +L+ MY + G    AR +FD +  RD  SWNAMISGY 
Sbjct: 362 LGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYS 421

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNL 279
             G   EAL     M+      + +T  SIL  C+ +  +  G      +V+ +G+E  +
Sbjct: 422 MHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCM 481

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
                ++ +  + G +  A+++ +++ +E +V  W +++ A    ND     G  +  Q 
Sbjct: 482 EHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHND--VDLGIMSAQQI 539

Query: 339 AGIQP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
             I P D  T V L++I A+     +  SV  F+  +G
Sbjct: 540 LQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKG 577



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 23/214 (10%)

Query: 44  ESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           ++ E+ +  + ++C  L  ++   ++H+L + +   K V     L++ YA  G +  +R 
Sbjct: 341 QASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARL 400

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            FD +S R+  +WN+MIS Y   G + EA+  F     T  + P+  TF  +L AC N  
Sbjct: 401 VFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV-PNKLTFVSILSACSNAG 459

Query: 159 LVD-GKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSG 210
           L+D G+    S+++     D  +   + H  C      R G  + A KL +++P+  +  
Sbjct: 460 LLDIGQNYFKSMVQ-----DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVK 514

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            W A++ G C   N V+ L I+   ++  + +DP
Sbjct: 515 VWRALL-GACVIHNDVD-LGIMSAQQI--LQIDP 544


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 288/806 (35%), Positives = 457/806 (56%), Gaps = 38/806 (4%)

Query: 50   FDDLFQSCTKLHHV---KRLHALLVVSGKI--KTVFSSTKLVNFYANLGDLSFSRHTFDH 104
            F  + ++   +H +   K++HA +   G     +V  +  LVN Y   GDL+ +R  FD 
Sbjct: 333  FPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD 392

Query: 105  ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-- 162
            I  R+  +WNSMI+   R      ++  F +  L+  + P  +T   V  AC ++  G  
Sbjct: 393  IPDRDHVSWNSMIATLCRFEEWELSLHLF-RLMLSENVDPTSFTLVSVAHACSHVRGGVR 451

Query: 163  --KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
              K++H   L+ G +   +   +L+ MY R G  N A+ LF     +D  SWN +IS   
Sbjct: 452  LGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510

Query: 221  QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFNL 279
            Q+    EAL  +  M ++GV  D +T+AS+LP C++ + +  G  IH Y +++G L  N 
Sbjct: 511  QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENS 570

Query: 280  FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN-DPITAHGFFTTMQQ 338
            FV   L++MY      +    VFD ++ R V  WN+++A Y ++  D      F   + +
Sbjct: 571  FVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE 630

Query: 339  AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            +   P+  T  S+     +     +   +HG+I++RG F +D  + NA++DMY+++G + 
Sbjct: 631  SEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRG-FGKDKYVQNALMDMYSRMGRVE 689

Query: 399  SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN---------------- 442
             +  +F  +  +D++SWNT+ITG    G   +A+ +   M+                   
Sbjct: 690  ISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGG 749

Query: 443  -EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
                PN  T +++LP  + + AL +G +IHA  +K  L  DV V + LVDMY KCG ++ 
Sbjct: 750  VPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNL 809

Query: 502  AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG------VRPDHITFVSL 555
            A  +F Q+P  + + WN +I  +G+HG+G++AL  FR M   G      +RP+ +T++++
Sbjct: 810  ASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAI 869

Query: 556  LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
              ACSHSG+V EG   FH M+   G++P   HY C+VDL GR+G +  A+  I  MP   
Sbjct: 870  FAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNL 929

Query: 616  D-ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
            +    W +LLGACRIH ++E G +A+  LF ++     +YVLMSNIY++ G W+    VR
Sbjct: 930  NKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVR 989

Query: 675  SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
               ++ G++K PG S IE  ++V  F +G+ +HP+ +++++ L  L+ +M+  GYVPD S
Sbjct: 990  KKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDIS 1049

Query: 735  FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
             VL +V+++EKE +L  HSERLAIAFG++++PP + I++ KNLRVC DCH  TK IS+I 
Sbjct: 1050 CVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIV 1109

Query: 795  EREIIVRDSNRFHHFKDGICSCGDYW 820
            +REII+RD  RFHHF +G CSCGDYW
Sbjct: 1110 DREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 253/514 (49%), Gaps = 27/514 (5%)

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE--WDVFVAASLLHMYCRFGLANVARK 199
           D + FP VLKA   + D   GK+IH  V K G      V VA SL++MY + G    AR+
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR-SD 258
           +FDD+P RD  SWN+MI+  C+      +L +   M  E V     T+ S+   C+    
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  +H Y +++G +   + +N L+ MYA+ G +  A  +F     +D+VSWN++I+
Sbjct: 449 GVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVIS 507

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
           +  Q++    A  +   M   G++PD +TL S+    +QL   R  R +H + +R G  +
Sbjct: 508 SLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLI 567

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
           E+  +G A+VDMY           VF+G+  + V  WN L+ GYA+N    +A+ +F  M
Sbjct: 568 ENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEM 627

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
              +E  PN  T+ S+LPA            IH  ++K     D +V   L+DMY + GR
Sbjct: 628 ISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGR 687

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML----------------D 542
           ++ + ++F ++ +   V WN +I+   + G+ D ALN   +M                 D
Sbjct: 688 VEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDD 747

Query: 543 EGV--RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            GV  +P+ +T +++L  C+    + +G+   H    +  +   +     +VD++ + G 
Sbjct: 748 GGVPFKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQKLAMDVAVGSALVDMYAKCGC 806

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           L +A      MP+R +   W  L+ A  +HG  E
Sbjct: 807 LNLASRVFDQMPIR-NVITWNVLIMAYGMHGKGE 839


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/716 (38%), Positives = 424/716 (59%), Gaps = 7/716 (0%)

Query: 109  NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKI 165
            +V  WN  +S +++ G   EAVDCF    + S +  D  TF  +L   A  N ++ GK+I
Sbjct: 899  DVIVWNKALSRFLQRGEAWEAVDCFVDM-INSRVACDGLTFVVMLTVVAGLNCLELGKQI 957

Query: 166  HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
            H  V++ G +  V V   L++MY + G  + AR +F  M   D  SWN MISG   SG  
Sbjct: 958  HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLE 1017

Query: 226  VEALDILDEMRLEGVSMDPITVASILPVCARSDN-ILSGLLIHLYIVKHGLEFNLFVSNN 284
              ++ +   +  + +  D  TVAS+L  C+  +        IH   +K G+  + FVS  
Sbjct: 1018 ECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077

Query: 285  LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
            LI++Y+K G M  A  +F      D+ SWN+I+  Y  S D   A   +  MQ++G + D
Sbjct: 1078 LIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137

Query: 345  LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
             +TLV+       L   +  + +H  +++RG F  D+ + + V+DMY K G + SA  VF
Sbjct: 1138 QITLVNAAKAAGGLVGLKQGKQIHAVVVKRG-FNLDLFVTSGVLDMYLKCGEMESARRVF 1196

Query: 405  EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
              +P  D ++W T+I+G  +NG    A+  +  M   +++ P++ T+ +++ A S + AL
Sbjct: 1197 SEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMR-LSKVQPDEYTFATLVKACSLLTAL 1255

Query: 465  RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             QG +IHA ++K    FD FV T LVDMY KCG I+DA  LF +        WNA+I   
Sbjct: 1256 EQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGL 1315

Query: 525  GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
              HG   +AL FF+ M   GV PD +TF+ +L+ACSHSGLVSE    F+ MQ+ +GI+P 
Sbjct: 1316 AQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPE 1375

Query: 585  LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
            ++HY C+VD   RAG +  A   I +MP    AS++  LL ACR+  + E G   +++L 
Sbjct: 1376 IEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLL 1435

Query: 645  EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
             ++  +   YVL+SN+YA   +WE V   R++ R   +KK PG+S +++ NKV +F  G+
Sbjct: 1436 ALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGD 1495

Query: 705  RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
            R+H + + IY+++  +  +++  GYVPD  F L DVEE++KE  L  HSE+LAIA+G++ 
Sbjct: 1496 RSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMK 1555

Query: 765  SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +PP + +++ KNLRVCGDCH+  K+IS++ +REI++RD+NRFHHF++GICSCGDYW
Sbjct: 1556 TPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 174/580 (30%), Positives = 273/580 (47%), Gaps = 43/580 (7%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYV 121
            KR HA ++ SG     F +  L+  YA  G LS +R  FD    + R++ TWN+++S   
Sbjct: 676  KRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL- 734

Query: 122  RCGRLSEAVDCFYQFTL--TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
                  ++ D F+ F L   S +    +T  PV K C    +    + +H   +K+G +W
Sbjct: 735  -AAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            DVFVA +L+++Y +FGL   AR LFD M VRD   WN M+  Y  +    EA+ +  E  
Sbjct: 794  DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              G   D +T+ ++  V     NIL       Y  K      LF       MY   G   
Sbjct: 854  RTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK------LF-------MYDDDG--- 897

Query: 297  HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
                        DV+ WN  ++ + Q  +   A   F  M  + +  D LT V + ++VA
Sbjct: 898  -----------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVA 946

Query: 357  QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
             LN     + +HG +MR G   + V +GN +++MY K G ++ A +VF  +   D+ISWN
Sbjct: 947  GLNCLELGKQIHGIVMRSG-LDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWN 1005

Query: 417  TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV-GALRQGIKIHARVI 475
            T+I+G   +GL   ++ +F  +   + + P+Q T  S+L A S + G      +IHA  +
Sbjct: 1006 TMISGCTLSGLEECSVGMFVHLLR-DSLLPDQFTVASVLRACSSLEGGYYLATQIHACAM 1064

Query: 476  KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
            K  +  D FV+T L+D+Y K G++++A  LF          WNAI+  + + G   KAL 
Sbjct: 1065 KAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALR 1124

Query: 536  FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ-RYFHMMQEEFGIKPHLKHYGCMVDL 594
             +  M + G R D IT V+   A    GLV   Q +  H +  + G    L     ++D+
Sbjct: 1125 LYILMQESGERSDQITLVNAAKAA--GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDM 1182

Query: 595  FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            + + G +  A      +P  PD   W  ++  C  +G  E
Sbjct: 1183 YLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEE 1221



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 230/459 (50%), Gaps = 12/459 (2%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            K++H +++ SG  + V     L+N Y   G +S +R  F  ++  ++ +WN+MIS     
Sbjct: 955  KQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLS 1014

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVF 179
            G L E     +   L   L PD +T   VL+AC +L  G     +IH   +K G   D F
Sbjct: 1015 G-LEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSF 1073

Query: 180  VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
            V+ +L+ +Y + G    A  LF +    D  SWNA++ GY  SG+  +AL +   M+  G
Sbjct: 1074 VSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESG 1133

Query: 240  VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
               D IT+ +          +  G  IH  +VK G   +LFV++ +++MY K G M  A 
Sbjct: 1134 ERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESAR 1193

Query: 300  RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT--TMQQAGIQPDLLTLVSLTSIVAQ 357
            RVF ++   D V+W ++I+   ++      H  FT   M+ + +QPD  T  +L    + 
Sbjct: 1194 RVFSEIPSPDDVAWTTMISGCVENGQE--EHALFTYHQMRLSKVQPDEYTFATLVKACSL 1251

Query: 358  LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            L      R +H  I++      D  +  ++VDMYAK G I  A  +F+    + + SWN 
Sbjct: 1252 LTALEQGRQIHANIVKLNCAF-DPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNA 1310

Query: 418  LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
            +I G AQ+G A EA++ F+ M+    + P++ T++ +L A SH G + +  +    + KN
Sbjct: 1311 MIVGLAQHGNAKEALQFFKYMKS-RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKN 1369

Query: 478  -CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
              +  ++   +CLVD   + GRI++A  +   +P  +S 
Sbjct: 1370 YGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASA 1408



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 157/322 (48%), Gaps = 12/322 (3%)

Query: 60   LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            L   K++HA++V  G    +F ++ +++ Y   G++  +R  F  I   +   W +MIS 
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213

Query: 120  YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
             V  G+   A+  ++Q  L S ++PD YTF  ++KAC  L     G++IH +++KL   +
Sbjct: 1214 CVENGQEEHALFTYHQMRL-SKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAF 1272

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D FV  SL+ MY + G    AR LF     R   SWNAMI G  Q GNA EAL     M+
Sbjct: 1273 DPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMK 1332

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK--HGLEFNLFVSNNLINMYAKFGM 294
              GV  D +T   +L  C+ S  ++S    + Y ++  +G+E  +   + L++  ++ G 
Sbjct: 1333 SRGVMPDRVTFIGVLSACSHS-GLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGR 1391

Query: 295  MRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP-DLLTLVSLT 352
            +  A +V   M  E     + +++ A     D  T  G     +   ++P D    V L+
Sbjct: 1392 IEEAEKVISSMPFEASASMYRTLLNACRVQVDRET--GKRVAEKLLALEPSDSAAYVLLS 1449

Query: 353  SIVAQLNDCRNSRSVHGFIMRR 374
            ++ A  N   N  S    +MR+
Sbjct: 1450 NVYAAANQWENVASARN-MMRK 1470



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 175/391 (44%), Gaps = 44/391 (11%)

Query: 249  SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME- 307
            SIL     + ++  G   H  I+  G   + FV+NNLI MYAK G +  A ++FD   + 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 308  -RDVVSWNSIIAAYEQSNDPITAHGF--FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
             RD+V+WN+I++A     D  +  GF  F  ++++ +     TL  +  +         S
Sbjct: 721  NRDLVTWNAILSALAAHADK-SHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779

Query: 365  RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
             S+HG+ ++ G    DV +  A+V++YAK G+I  A  +F+G+ V+DV+ WN ++  Y  
Sbjct: 780  ESLHGYAVKIG-LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838

Query: 425  NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI---KNCLCF 481
              L  EA+ +F          P+  T                 ++  +RV+   KN L  
Sbjct: 839  TCLEYEAMLLFSEFHRTG-FRPDDVT-----------------LRTLSRVVKCKKNILEL 880

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLF-YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
              F A               A  LF Y    S  + WN  +S     G+  +A++ F  M
Sbjct: 881  KQFKAY--------------ATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDM 926

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            ++  V  D +TFV +LT  +    +  G++  H +    G+   +    C+++++ +AG 
Sbjct: 927  INSRVACDGLTFVVMLTVVAGLNCLELGKQ-IHGIVMRSGLDQVVSVGNCLINMYVKAGS 985

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +  A +    M    D   W  ++  C + G
Sbjct: 986  VSRARSVFGQMN-EVDLISWNTMISGCTLSG 1015



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 15/194 (7%)

Query: 35   QISPDCLENESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
            ++ PD       E  F  L ++C   T L   +++HA +V        F  T LV+ YA 
Sbjct: 1234 KVQPD-------EYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAK 1286

Query: 92   LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
             G++  +R  F   + R + +WN+MI    + G   EA+  F+++  + G+ PD  TF  
Sbjct: 1287 CGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQ-FFKYMKSRGVMPDRVTFIG 1345

Query: 152  VLKACRN--LVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            VL AC +  LV    +  +      G E ++   + L+    R G    A K+   MP  
Sbjct: 1346 VLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFE 1405

Query: 208  DSGSWNAMISGYCQ 221
             S S    +   C+
Sbjct: 1406 ASASMYRTLLNACR 1419


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 291/780 (37%), Positives = 412/780 (52%), Gaps = 122/780 (15%)

Query: 46  REIDFDDLFQSCTKLHHVKRLHALLVVSG-----KIKTVFSSTKLVNFYANLGDLSFSRH 100
           R I   D +   T LH +    +L    G      ++   +   +++ +AN G +S +RH
Sbjct: 93  RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD    ++  +WN M++ YVR GR+ EA   F   T                       
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----------------------- 189

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                         EWDV    +L+  Y ++G  + AR+LFD MP RD  SWN M+SGY 
Sbjct: 190 --------------EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 235

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           + G+ VEA  + D          P+                                ++F
Sbjct: 236 RRGDMVEARRLFDAA--------PVR-------------------------------DVF 256

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
               +++ YA+ GM+  A RVFD M ER+ VSWN+++AAY Q      A   F  M    
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP--- 313

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
                               CRN  S         W        N ++  YA+ G++  A
Sbjct: 314 --------------------CRNVAS---------W--------NTMLTGYAQAGMLEEA 336

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
            AVF+ +P KD +SW  ++  Y+Q G + E +++F  M  C E   N+  +  +L   + 
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCAD 395

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + AL  G+++H R+I+       FV   L+ MY KCG ++DA + F ++     V WN +
Sbjct: 396 IAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  HG G +AL  F  M     +PD IT V +L ACSHSGLV +G  YF+ M  +FG
Sbjct: 456 IAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFG 515

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           +    +HY CM+DL GRAG L  AH+ +++MP  PD+++WGALLGA RIH N ELG  A+
Sbjct: 516 VTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAA 575

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +++FE++ EN G YVL+SNIYA+ GKW    ++R +  +RG+KK PG+S IEV NKV  F
Sbjct: 576 EKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTF 635

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+  HP+ EKIY  L +L  +MK  GYV     VL DVEE+EKEH+L  HSE+LA+A+
Sbjct: 636 SAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAY 695

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GI++ PP  PI++ KNLRVCGDCHN  K+IS I  R I++RDSNRFHHF+ G CSCGDYW
Sbjct: 696 GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 45/331 (13%)

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           LE  +  SN  I  + + G +  A R+F  M  R   ++N+++A Y  +     A   F 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 335 TMQQAGIQPD---LLTLVSLTSIVAQLNDCR------------------NSRSVHGFI-M 372
            +     +PD     TL+   ++ + L D R                  +S + HG + +
Sbjct: 94  AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 373 RRGWF----MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            R +F     +D +  N ++  Y + G +  A  +F      DVISWN L++GY Q G  
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVAT 487
           SEA E+F  M   + ++ N    VS        G  R+G  + AR + +     DVF  T
Sbjct: 210 SEARELFDRMPGRDVVSWN--IMVS--------GYARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            +V  Y + G +++A  +F  +P  ++V WNA+++ +      D+A   F  M    V  
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV-- 317

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
              ++ ++LT  + +G++ E +  F  M ++
Sbjct: 318 --ASWNTMLTGYAQAGMLEEAKAVFDTMPQK 346



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/261 (19%), Positives = 113/261 (43%), Gaps = 21/261 (8%)

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G    +VI  N  +  + + G +  A  +F  +P +   ++N ++ GY+ NG    A  +
Sbjct: 32  GRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMY 493
           F+ +       P+  +Y ++L A +   +L     +   + +++ + ++V +++     +
Sbjct: 92  FRAIPR-----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----H 141

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
              G +  A   F   P   +V WN +++ +  +G+ ++A    R + +     D I++ 
Sbjct: 142 ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDVISWN 197

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           +L++     G +SE +  F  M         +  +  MV  + R G +  A       PV
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAPV 252

Query: 614 RPDASIWGALLGACRIHGNME 634
           R D   W A++     +G +E
Sbjct: 253 R-DVFTWTAVVSGYAQNGMLE 272


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/621 (42%), Positives = 403/621 (64%), Gaps = 12/621 (1%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SWN++I+ + +SG++++AL     MR   +  +  T    +  C+   ++ +G  IH   
Sbjct: 53  SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
              G   ++FV++ LI+MY+K G +  A ++FD++ ER+VVSW S+I+ Y Q+     A 
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172

Query: 331 GFFTT-----------MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
             F             +   G+  D + L  + S  A++     +  VHG  +++G F  
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG-FEG 231

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            + +GN ++D YAK G I+ +  VF+G+   DV SWN+LI  YAQNGL+ EA  +F  M 
Sbjct: 232 CLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMV 291

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           +  E+  N  T  ++L A +H GAL+ G  IH +V+K  L  ++ V T +VDMY KCGR+
Sbjct: 292 KRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRV 351

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           + A   F ++ R +   W  +++ +G+HG G +A+  F +M+  G++P++ITFVS+L AC
Sbjct: 352 EMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAAC 411

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH+GL+ EG  +F+ M+ EF ++P ++HY CMVDL GRAG+L  A+  IQ M V+PD  +
Sbjct: 412 SHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIV 471

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WG+LLGACRIH N+ELG +++ +LF++D  N GYYVL+SNIYA+ G+W+ V+ +R L ++
Sbjct: 472 WGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKN 531

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
            GL KTPG+S +E   +V +F  G++ HP++EKIY+ L  L  K++ +GY+P+ + VL D
Sbjct: 532 HGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYD 591

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           V+ +EK  +L  HSE+LA+AFGI++S P S IQI KNLR+CGDCH   K IS+I  REI+
Sbjct: 592 VDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIV 651

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           +RDS RFHHFKDG+CSCGDYW
Sbjct: 652 IRDSKRFHHFKDGLCSCGDYW 672



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 237/444 (53%), Gaps = 26/444 (5%)

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
           ++   +VY+WNS+I+ + R G   +A+  F      S L P+  TFP  +K+C +L D  
Sbjct: 45  YVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLS-LHPNRSTFPCTIKSCSSLYDLC 103

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+IH      G+  D+FVA++L+ MY + G  N ARKLFD++P R+  SW +MISGY 
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYV 163

Query: 221 QSGNAVEALDIL-----------DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
           Q+  A EA+ +            DE+   GV +D + +  ++  CAR         +H  
Sbjct: 164 QNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGL 223

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            VK G E  L V N L++ YAK G +  + +VFD M E DV SWNS+IA Y Q+   + A
Sbjct: 224 AVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEA 283

Query: 330 HGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
              F+ M + G ++ + +TL ++    A     +  + +H  +++     +++++G ++V
Sbjct: 284 FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME-LEDNLVVGTSIV 342

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMY K G +  A   F+ L  K+V SW  ++ GY  +G   EA++VF  M  C  I PN 
Sbjct: 343 DMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG-IKPNY 401

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMS 504
            T+VS+L A SH G L++G     ++   C  FDV       +C+VD+ G+ G + +A  
Sbjct: 402 ITFVSVLAACSHAGLLKEGWHWFNKM--KCE-FDVEPGIEHYSCMVDLLGRAGYLKEAYG 458

Query: 505 LFYQVP-RSSSVPWNAIISCHGIH 527
           L  ++  +   + W +++    IH
Sbjct: 459 LIQEMKVKPDFIVWGSLLGACRIH 482



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 197/399 (49%), Gaps = 40/399 (10%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F    +SC+ L+ +   K++H    V G    +F ++ L++ Y+  G L+ +R  FD I 
Sbjct: 89  FPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP 148

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS----------GLRPDFYTFPPVLKAC 156
            RNV +W SMIS YV+  R  EAV  F +F L            G+  D      V+ AC
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208

Query: 157 RNLVDGKKIHCS---VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             +       C     +K GFE  + V  +L+  Y + G  +V+RK+FD M   D  SWN
Sbjct: 209 ARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268

Query: 214 AMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           ++I+ Y Q+G +VEA  +  +M   G V  + +T++++L  CA S  +  G  IH  +VK
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
             LE NL V  ++++MY K G +  A + FD++  ++V SW  ++A Y        A   
Sbjct: 329 MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKV 388

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF----ME---DVIIG- 384
           F  M + GI+P+ +T VS+ +  +           H  +++ GW     M+   DV  G 
Sbjct: 389 FYEMIRCGIKPNYITFVSVLAACS-----------HAGLLKEGWHWFNKMKCEFDVEPGI 437

Query: 385 ---NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
              + +VD+  + G +  A  + + + VK D I W +L+
Sbjct: 438 EHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 262/684 (38%), Positives = 429/684 (62%), Gaps = 8/684 (1%)

Query: 140 SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           SG+  D + +  ++ +  +    K+IH  +L LG ++  F+   L+H    FG    AR+
Sbjct: 16  SGIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +FDD+P      WNA+I GY ++ +  +AL +   M+L  VS D  T   +L  C+   +
Sbjct: 75  VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSII 317
           +  G  +H  + + G + ++FV N LI +YAK   +  A  VF+   + ER +VSW +I+
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           +AY Q+ +P+ A   F+ M++  ++PD + LVS+ +    L D +  RS+H  +++ G  
Sbjct: 195 SAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254

Query: 378 ME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           +E D++I  ++  MYAK G + +A  +F+ +   ++I WN +I+GYA+NG A EAI++F 
Sbjct: 255 IEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M    ++ P+  +  S + A + VG+L Q   ++  V ++    DVF+++ L+DM+ KC
Sbjct: 313 EMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G ++ A  +F +      V W+A+I  +G+HG+  +A++ +R M   GV P+ +TF+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            AC+HSG+V EG  +F++M +   I P  +HY C++DL GRAGHL  A+  I+ MPV+P 
Sbjct: 432 MACNHSGMVREGWWFFNLMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
            ++WGALL AC+ H ++ELG  A+ +LF +D  N G+YV +SN+YA    W+ V EVR  
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            +++GL K  G S +EV  +++ F  G+++HP+YE+I  ++  + +++K  G+V +K   
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L D+ ++E E  L SHSER+AIA+G+IS+P  +P++I KNLR C +CH  TK IS++ +R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           EI+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/479 (31%), Positives = 255/479 (53%), Gaps = 9/479 (1%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  L  S T    +K++HA L+V G   + F  TKL++  ++ GD++F+R  FD +    
Sbjct: 24  YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           ++ WN++I  Y R     +A+  +    L   + PD +TFP +LKAC  L     G+ +H
Sbjct: 84  IFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVH 142

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGN 224
             V +LGF+ DVFV   L+ +Y +      AR +F+ +P+  R   SW A++S Y Q+G 
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
            +EAL+I   MR   V  D + + S+L       ++  G  IH  +VK GLE    +  +
Sbjct: 203 PMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L  MYAK G +  A  +FD+M   +++ WN++I+ Y ++     A   F  M    ++PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +++ S  S  AQ+     +RS++ ++ R   + +DV I +A++DM+AK G +  A  VF
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           +    +DV+ W+ +I GY  +G A EAI +++ ME    ++PN  T++ +L A +H G +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGMV 440

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
           R+G      +  + +        C++D+ G+ G +D A  +   +P    V  W A++S
Sbjct: 441 REGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/784 (37%), Positives = 448/784 (57%), Gaps = 44/784 (5%)

Query: 77   KTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
            K V S T L++ YA    G ++ +R+ FD + +RN  +W++M+S YVR G   EAV  F 
Sbjct: 304  KNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFC 363

Query: 135  QFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
            Q     G+ P+ +    ++ AC        +G ++H  V+K G   DV+V  +L+H Y  
Sbjct: 364  QM-WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGS 422

Query: 191  FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
             GL   A+KLF++MP  +  SW +++ GY  SGN  E L++   MR EGVS +  T A++
Sbjct: 423  IGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 482

Query: 251  LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
               C   ++ + G  +  +I+++G E ++ V+N+LI+M++ F  +  A  VFD M E D+
Sbjct: 483  TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 542

Query: 311  VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
            +SWN++I+AY        +   F  M+    + +  TL SL S+ + +++ +  R +HG 
Sbjct: 543  ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 602

Query: 371  IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT------------- 417
            +++ G    +V I N ++ +Y++ G    A  VF+ +  +D+ISWN+             
Sbjct: 603  VVKLG-LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 661

Query: 418  ---------------------LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
                                 LI G+A+N   +EA++ ++++ E   I  N  T VS L 
Sbjct: 662  GLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIRE-KGIPANYITMVS-LA 719

Query: 457  AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
            A +++  L +G ++H  VIK     D+ V    +DMYGKCG + D + +  Q    S + 
Sbjct: 720  ATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS 779

Query: 517  WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
            WN +IS    HG   KA   F +ML  G +PDH+TFVSLL+AC+H GLV EG  Y+  M 
Sbjct: 780  WNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMT 839

Query: 577  EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
             EFG+ P ++H  C++DL GR+G L  A  FI+ MPV P+   W +LL ACRIHGN+EL 
Sbjct: 840  REFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA 899

Query: 637  AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
               ++ L E+D  +   YVL SN+ A  GKWE V+ +R       +KK P  S +++ +K
Sbjct: 900  RKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDK 959

Query: 697  VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
            V  F  G + HP+  +I  +L  L    K  GYVPD SF L D++E++KE+ L +HSERL
Sbjct: 960  VHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERL 1019

Query: 757  AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
            A+AFG+I++P  S ++IFKNLRVCGDCH+  KF+S I  R+I++RD  RFHHF  G CSC
Sbjct: 1020 ALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1079

Query: 817  GDYW 820
            GDYW
Sbjct: 1080 GDYW 1083



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/619 (25%), Positives = 266/619 (42%), Gaps = 135/619 (21%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHH 62
           ++  +C   RL + L LL ++ P     +  L+I   C++ +++            K  H
Sbjct: 4   KIQSACNLGRLAEALKLLSSN-PTRLDPSLYLKILQLCIDKKAK------------KQGH 50

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +  +H  L+ +G    +  +TKL+ FY  +GD+  +R+ FD +  R+V +W +M+S Y +
Sbjct: 51  L--IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAA 182
            GR  +A      F L S +R                      HC V             
Sbjct: 109 NGRFEKA------FVLFSDMR----------------------HCGVK---------ANH 131

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+  + + G    A  LF  M  RD  SWNAMI GY   G A ++  +   M   G+  
Sbjct: 132 ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP 191

Query: 243 DPITVASILPVCAR--------------------SDNILSGLLIHLY-----------IV 271
           D  T+ S+L   A                     S +I++GLLI+ Y           + 
Sbjct: 192 DCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLR 251

Query: 272 KHGLEFNLFVS----------------NNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           K  L+ +LF S                N LI+MYAK G +  A R FD+M E++V+SW S
Sbjct: 252 KGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTS 311

Query: 316 IIAAYEQSNDPITAH---------------------------------GFFTTMQQAGIQ 342
           +I+ Y +      AH                                 G F  M   G++
Sbjct: 312 LISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVE 371

Query: 343 PDLLTLVSLTSIVAQLNDCRNSR-SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           P+   + SL +  ++     +    VHGF+++ G  + DV +G A+V  Y  +G++ +A 
Sbjct: 372 PNGFMVASLITACSRSGYMADEGFQVHGFVVKTG-ILGDVYVGTALVHFYGSIGLVYNAQ 430

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +FE +P  +V+SW +L+ GY+ +G   E + V+Q M +   ++ NQ T+ ++  +   +
Sbjct: 431 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ-EGVSGNQNTFATVTSSCGLL 489

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
                G ++   +I+      V VA  L+ M+     +++A  +F  +     + WNA+I
Sbjct: 490 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 549

Query: 522 SCHGIHGQGDKALNFFRQM 540
           S +  HG   ++L  F  M
Sbjct: 550 SAYAHHGLCRESLRCFHWM 568



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 47/298 (15%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H L+V  G    V     L+  Y+  G    +   F  ++ R++ +WNSM++ YV+ 
Sbjct: 597 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 656

Query: 124 GRL----------------------------------SEAVDCFYQFTLTSGLRPDFYTF 149
           G+                                   +EAV   Y+     G+  ++ T 
Sbjct: 657 GKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKA-YKLIREKGIPANYITM 715

Query: 150 PPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
              L A  NL    +G+++H  V+KLGFE D+ V  + + MY + G  +   K+      
Sbjct: 716 VS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPIN 774

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           R   SWN +IS + + G   +A +   EM   G   D +T  S+L  C     +  GL  
Sbjct: 775 RSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAY 834

Query: 267 HLYIVKHGLEFNLFVSNN----LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           +  + +   EF +F        +I++  + G + HA     +M +  + ++W S++AA
Sbjct: 835 YDSMTR---EFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAA 889


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 262/684 (38%), Positives = 428/684 (62%), Gaps = 8/684 (1%)

Query: 140 SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           SG+  D + +  ++ +  +    K+IH  +L LG ++  F+   L+H    FG    AR+
Sbjct: 16  SGIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +FDD+P      WNA+I GY ++ +  +AL +   M+L  VS D  T   +L  C+   +
Sbjct: 75  VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSII 317
           +  G  +H  + + G + ++FV N LI +YAK   +  A  VF+   + ER +VSW +I+
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           +AY Q+ +P+ A   F+ M++  ++PD + LVS+ +    L D +  RS+H  +++ G  
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254

Query: 378 ME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           +E D++I  ++  MYAK G + +A  +F+ +   ++I WN +I+GYA+NG A EAI++F 
Sbjct: 255 IEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M    ++ P+  +  S + A + VG+L Q   ++  V ++    DVF+++ L+DM+ KC
Sbjct: 313 EMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G ++ A  +F +      V W+A+I  +G+HG+  +A++ +R M   GV P+ +TF+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            AC+HSG+V EG  +F+ M +   I P  +HY C++DL GRAGHL  A+  I+ MPV+P 
Sbjct: 432 MACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
            ++WGALL AC+ H ++ELG  A+ +LF +D  N G+YV +SN+YA    W+ V EVR  
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            +++GL K  G S +EV  +++ F  G+++HP+YE+I  ++  + +++K  G+V +K   
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L D+ ++E E  L SHSER+AIA+G+IS+P  +P++I KNLR C +CH  TK IS++ +R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           EI+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 258/484 (53%), Gaps = 9/484 (1%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  L  S T    +K++HA L+V G   + F  TKL++  ++ GD++F+R  FD +    
Sbjct: 24  YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           ++ WN++I  Y R     +A+  +    L   + PD +TFP +LKAC  L     G+ +H
Sbjct: 84  IFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVH 142

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGN 224
             V +LGF+ DVFV   L+ +Y +      AR +F+ +P+  R   SW A++S Y Q+G 
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
            +EAL+I  +MR   V  D + + S+L       ++  G  IH  +VK GLE    +  +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L  MYAK G +  A  +FD+M   +++ WN++I+ Y ++     A   F  M    ++PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +++ S  S  AQ+     +RS++ ++ R   + +DV I +A++DM+AK G +  A  VF
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           +    +DV+ W+ +I GY  +G A EAI +++ ME    ++PN  T++ +L A +H G +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGMV 440

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISC 523
           R+G     R+  + +        C++D+ G+ G +D A  +   +P    V  W A++S 
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 524 HGIH 527
              H
Sbjct: 501 CKKH 504


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/781 (36%), Positives = 462/781 (59%), Gaps = 18/781 (2%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C+    +    ++H  ++  G        T L+  Y  +  L  +   FD + 
Sbjct: 103 FPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP 162

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+V  W+S++  +V+ G+ SE +D F Q  ++  + PD  T   V +AC  L     G+
Sbjct: 163 IRDVVAWSSIVLNFVQNGQASEGLDMFSQM-ISEAVEPDSVTMLSVTEACSELGSLRLGR 221

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  V++   E +  +  SL+ MY + G    A +LF+++P R +  W  MIS Y QSG
Sbjct: 222 SVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSG 281

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL-FVS 282
              EAL++  +M+   +  + +T+  +L  CAR   +  G  +H ++++  ++  L F+ 
Sbjct: 282 CFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLG 341

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             L+ +YA  G +R   +VF+ + E+ ++SWN++I+ + ++  P  A   F  MQ  G+ 
Sbjct: 342 PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLM 401

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  +L S  S    ++  +    +HG+I++ G F +   + NA++DMYAK G ++SA  
Sbjct: 402 PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND--FVQNALIDMYAKCGFVHSANK 459

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 461
           +FE +  K +++WN++I G++QNG + EAI +F QM   C  +  ++ T++S++ A SH+
Sbjct: 460 MFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNC--VKMDKLTFLSVIQACSHL 517

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G L +G  +H ++I   L  D ++ T L DMY KCG +  A  +F ++   S V W+ +I
Sbjct: 518 GYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +G+HGQ +  ++ F QML  G++P+ ITF+ +L+ACSH+G V EG+ YF+ M E FG+
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGV 636

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P   H+ CMVDL  RAG L  A+  I ++P   ++SIWGALL  CRIH  +++      
Sbjct: 637 EPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEK 696

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L +VD+ + GYY L+SNIYA  G W+   +VRS+ + +GL+K PG+S+IE++ K+  F 
Sbjct: 697 NLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFG 756

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGY--VPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
            G+ +H + + IY  L N  + + +  Y   PD S V     +  KE+ + SHSE+LAIA
Sbjct: 757 PGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIA 814

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FGII++ P + ++I KNLRVC DCH++ K  S+IT REII+RD NRFH F++G CSC DY
Sbjct: 815 FGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDY 874

Query: 820 W 820
           W
Sbjct: 875 W 875



 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 188/584 (32%), Positives = 302/584 (51%), Gaps = 7/584 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           LF+ C     + +LHA L ++G  +   +STKL+  YA +G    S+  FD     + + 
Sbjct: 7   LFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFM 66

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           W  +I  YV  G   EAV  +++       +   + FP VLKAC    D   G K+H  V
Sbjct: 67  WGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRV 126

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K GFE D  V  SLL MY      + A K FD MP+RD  +W++++  + Q+G A E L
Sbjct: 127 IKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGL 186

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+  +M  E V  D +T+ S+   C+   ++  G  +H Y+V+  +E N  ++N+LI MY
Sbjct: 187 DMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMY 246

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G +  A R+F+ +  R    W  +I+ Y QS     A   F  MQ+  ++P+ +T+V
Sbjct: 247 GKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMV 306

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            +    A+L   +  RSVHGF++RR    E   +G A++++YA  G +     VFE +  
Sbjct: 307 GVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKE 366

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K ++SWNTLI+ + +NG   EA+ +F  M+    + P+  +  S L A   +   + G +
Sbjct: 367 KTILSWNTLISIFTRNGQPEEALLLFVQMQT-QGLMPDSYSLASSLSACGTISFSQLGAQ 425

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  +IK    F+ FV   L+DMY KCG +  A  +F ++   S V WN++I     +G 
Sbjct: 426 IHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGY 484

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
             +A+  F QM    V+ D +TF+S++ ACSH G + +G ++ H     +G++       
Sbjct: 485 SVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDT 543

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            + D++ + G L MAH     M  R   S W  ++    +HG +
Sbjct: 544 ALTDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAGYGMHGQI 586



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 205/402 (50%), Gaps = 4/402 (0%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           + P+ + C       ++H  +   G       +  L+  Y + G+   ++++FD  P  D
Sbjct: 4   YMPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPD 63

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIH 267
           S  W  +I  Y   G   EA+ +  EM  +    +      S+L  C+   ++  G  +H
Sbjct: 64  SFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVH 123

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
             ++K G E +  V  +L+ MY +   +  A + FD M  RDVV+W+SI+  + Q+    
Sbjct: 124 GRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQAS 183

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
                F+ M    ++PD +T++S+T   ++L   R  RSVHG+++RR     +  + N++
Sbjct: 184 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRRE-IESNASLNNSL 242

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           + MY KLG + SA  +FE +P +    W  +I+ Y Q+G   EA+ VF  M+E  ++ PN
Sbjct: 243 IVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEF-KMEPN 301

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV-FVATCLVDMYGKCGRIDDAMSLF 506
           Q T V +L A + +G +++G  +H  VI+  +  ++ F+   L+++Y   G + D   +F
Sbjct: 302 QVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVF 361

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
             +   + + WN +IS    +GQ ++AL  F QM  +G+ PD
Sbjct: 362 ETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPD 403



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 101/191 (52%), Gaps = 10/191 (5%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
           Q+  +C++ +  ++ F  + Q+C+ L ++++   +H  L++ G  K  +  T L + Y+ 
Sbjct: 494 QMYMNCVKMD--KLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSK 551

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            G+L  +   FD +S R++ +W+ MI+ Y   G+++  +  F Q  L SG++P+  TF  
Sbjct: 552 CGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQM-LGSGIKPNDITFMH 610

Query: 152 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-R 207
           +L AC +   + +GK    S+ + G E      A ++ +  R G  N A ++   +P   
Sbjct: 611 ILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPA 670

Query: 208 DSGSWNAMISG 218
           +S  W A+++G
Sbjct: 671 NSSIWGALLNG 681


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/755 (37%), Positives = 440/755 (58%), Gaps = 10/755 (1%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           ++ SG   TV  +  L++ + N   +  +   FD +  R+  +WNS+I+  V  G   ++
Sbjct: 186 VIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKS 245

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLH 186
           ++ F Q   T   + D+ T   +L  C   +NL  G+ +H  V+K G E +V V  SLL 
Sbjct: 246 LEYFSQMRYTHA-KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLS 304

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY + G +  A  +F  M  RD  SWN+M++ +  +GN   AL++L EM     + + +T
Sbjct: 305 MYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVT 364

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
             + L  C    N+ +  ++H +++  GL  NL + N L+ MY KFG M  A RV   M 
Sbjct: 365 FTTALSACY---NLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMP 421

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN-SR 365
           +RD V+WN++I  +  + +P  A   F  +++ G+  + +T+V+L S     +D  +   
Sbjct: 422 DRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGM 481

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H  I+  G+ +E   + ++++ MYA+ G +N++  +F+ L  K+  +WN +++  A  
Sbjct: 482 PIHAHIVVAGFELE-TFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHY 540

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G   EA+++   M   + I+ +Q ++        ++  L +G ++H+ +IK+    + +V
Sbjct: 541 GPGEEALKLIIKMRN-DGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYV 599

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
               +DMYGKCG IDD   +  Q    S   WN +IS    HG   +A   F +MLD G+
Sbjct: 600 LNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGL 659

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           RPDH+TFVSLL+ACSH GLV EG  YF  M  +FG+   ++H  C++DL GRAG L  A 
Sbjct: 660 RPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAE 719

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
           NFI  MPV P   +W +LL AC+IHGN+EL   A+DRLFE+DS +   YVL SN+ A+  
Sbjct: 720 NFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTR 779

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           +W  V+ VR       +KK P  S +++ N+V  F  G++ HP+  +IY +L  L   ++
Sbjct: 780 RWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIR 839

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             GY+PD S+ LQD +E++KEH L +HSER+A+AFG+I+S   SP++IFKNLRVCGDCH+
Sbjct: 840 EAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHS 899

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             K +SQI  R+II+RD+ RFHHF  G CSC DYW
Sbjct: 900 VFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 170/571 (29%), Positives = 291/571 (50%), Gaps = 12/571 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++HA ++  G    VF  T L++FY   G ++     F  I   N+ +W S++  Y   G
Sbjct: 80  QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG 139

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
            + E +   Y+     G+  +      V+++C  LVD   G ++  SV+K G +  V VA
Sbjct: 140 CVKEVMS-VYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVA 198

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ M+        A  +FDDM  RD+ SWN++I+    +G+  ++L+   +MR     
Sbjct: 199 NSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAK 258

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D IT++++LPVC  + N+  G  +H  +VK GLE N+ V N+L++MY++ G    A  V
Sbjct: 259 TDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFV 318

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +M ERD++SWNS++A++  + +   A      M Q     + +T  +  S    L   
Sbjct: 319 FHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL 378

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              + VH F++  G    ++IIGNA+V MY K G + +A  V + +P +D ++WN LI G
Sbjct: 379 ---KIVHAFVILLG-LHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG 434

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY-SHVGALRQGIKIHARVIKNCLC 480
           +A N   + AIE F ++ E   +  N  T V++L A+ S    L  G+ IHA ++     
Sbjct: 435 HADNKEPNAAIEAFNLLRE-EGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFE 493

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            + FV + L+ MY +CG ++ +  +F  +   +S  WNAI+S +  +G G++AL    +M
Sbjct: 494 LETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKM 553

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            ++G+  D  +F        +  L+ EGQ+  H +  + G + +       +D++G+ G 
Sbjct: 554 RNDGIHLDQFSFSVAHAIIGNLTLLDEGQQ-LHSLIIKHGFESNDYVLNATMDMYGKCGE 612

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +      +     R   S W  L+ A   HG
Sbjct: 613 IDDVFRILPQPRSRSQRS-WNILISALARHG 642



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 155/554 (27%), Positives = 280/554 (50%), Gaps = 17/554 (3%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y+  G +  ++H FD +  RN  +WN+++S +VR G   +A+  F+   L  G+RP  Y
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQ-FFCHMLEHGVRPSSY 59

Query: 148 TFPPVLKACRN---LVDGK-KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
               ++ AC     + +G  ++H  V+K G   DVFV  SLLH Y  FG       +F +
Sbjct: 60  VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           +   +  SW +++ GY  +G   E + +   +R +GV  +   +A+++  C    + + G
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +   ++K GL+  + V+N+LI+M+     +  A  VFD M ERD +SWNSII A   +
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                +  +F+ M+    + D +T+ +L  +     + R  R +HG +++ G    +V +
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSG-LESNVCV 298

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECN 442
            N+++ MY++ G    A  VF  +  +D+ISWN+++  +  NG    A+E+  +M++   
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
             N     YV+   A S    L     +HA VI   L  ++ +   LV MYGK G +  A
Sbjct: 359 ATN-----YVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAA 413

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA-CSH 561
             +   +P    V WNA+I  H  + + + A+  F  + +EGV  ++IT V+LL+A  S 
Sbjct: 414 QRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSP 473

Query: 562 SGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
             L+  G   + H++   F ++  ++    ++ ++ + G L  + N+I ++    ++S W
Sbjct: 474 DDLLDHGMPIHAHIVVAGFELETFVQ--SSLITMYAQCGDLNTS-NYIFDVLANKNSSTW 530

Query: 621 GALLGACRIHGNME 634
            A+L A   +G  E
Sbjct: 531 NAILSANAHYGPGE 544



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 238/477 (49%), Gaps = 6/477 (1%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   + LH ++V SG    V     L++ Y+  G    +   F  +  R++ +WNS
Sbjct: 273 SAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNS 332

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 175
           M++ +V  G    A++   +  L +    ++ TF   L AC NL   K +H  V+ LG  
Sbjct: 333 MMASHVDNGNYPRALELLIEM-LQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLH 391

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            ++ +  +L+ MY +FG    A+++   MP RD  +WNA+I G+  +     A++  + +
Sbjct: 392 HNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLL 451

Query: 236 RLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           R EGV ++ IT+ ++L      D++L  G+ IH +IV  G E   FV ++LI MYA+ G 
Sbjct: 452 REEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGD 511

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  +  +FD +  ++  +WN+I++A         A      M+  GI  D  +     +I
Sbjct: 512 LNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAI 571

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           +  L      + +H  I++ G+   D ++ NA +DMY K G I+    +      +   S
Sbjct: 572 IGNLTLLDEGQQLHSLIIKHGFESNDYVL-NATMDMYGKCGEIDDVFRILPQPRSRSQRS 630

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN LI+  A++G   +A E F  M +   + P+  T+VS+L A SH G + +G+   + +
Sbjct: 631 WNILISALARHGFFQQAREAFHEMLDLG-LRPDHVTFVSLLSACSHGGLVDEGLAYFSSM 689

Query: 475 -IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
             K  +   +    C++D+ G+ G++ +A +   ++P   + + W ++++   IHG 
Sbjct: 690 STKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGN 746


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/779 (35%), Positives = 433/779 (55%), Gaps = 11/779 (1%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  +  V+    +H +++  G +  VF    LV  Y   G +  +   FD + 
Sbjct: 149 FPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMP 208

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVD-GK 163
             N+ +WNSMI  +   G   ++ D   +     GL PD  T   +L  C     VD G 
Sbjct: 209 ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGM 268

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH   +KLG   +V V  ++++MY + G  N A+  F     ++  SWN MIS +   G
Sbjct: 269 GIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEG 328

Query: 224 NAVEALDILDEMRLEGVSM--DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +  EA ++L EM+++G  M  + +T+ ++LP C     + S   +H Y  +H  + ++ +
Sbjct: 329 DVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVEL 387

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           SN  I  YAK G +  A +VF  + ++ V SWN++I  + Q+ DP  A      M  +G 
Sbjct: 388 SNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQ 447

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           QPD  T+ SL    A L   +  + +HG+++R G    D  +G +++  Y   G  +SA 
Sbjct: 448 QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG-LETDFFVGTSLLSHYIHCGKASSAR 506

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+ +  K+++SWN +I+GY+QNGL  E++ +F+       I  ++   VS+  A S +
Sbjct: 507 VLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRK-SLSEGIQSHEIAIVSVFGACSQL 565

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            ALR G + H  V+K     D FV   ++DMY K G I ++  +F  +   +   WNAII
Sbjct: 566 SALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAII 625

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
             HGIHG G +A+  + +M   G  PD  T++ +L AC H+GLV EG +YF  MQ    I
Sbjct: 626 VAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLI 685

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P L+HY C++D+  RAG L  A   +  MP   D  IW +LL +CR  G +E+G   + 
Sbjct: 686 EPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAK 745

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           +L E++ +    YVL+SN+YA +GKW+GV  VR + ++ GL+K  G S IEV  +V  F 
Sbjct: 746 KLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFV 805

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+   PK  +I    R L  ++  +GY P+ S VL +V E+EK  IL  HSE+LAI+FG
Sbjct: 806 VGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFG 865

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ +   + ++I+KNLR+C DCHN  K IS+  EREI+VRD+ RFHHF+DG+CSC DYW
Sbjct: 866 LLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  298 bits (763), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 205/642 (31%), Positives = 333/642 (51%), Gaps = 31/642 (4%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHH 62
            +A  C+   L   L L+Q+H    +AA  SLQ                 L Q+C     
Sbjct: 11  EIAALCETDNLTTALILIQSHSQ--NAAFISLQAKEA----------IGLLLQACGNQKD 58

Query: 63  V---KRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           +   +RLH  +  S   +  +  +T+L+  YA  G    SR  FD++  +N+  WN+++S
Sbjct: 59  IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVS 118

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            Y R G   + V  F      +  +PD +TFP V+KAC  ++D   G+ IH  V+K+G  
Sbjct: 119 GYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLV 178

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            DVFV  +L+ MY + G  + A K+FD MP  +  SWN+MI  + ++G + ++ D+L EM
Sbjct: 179 LDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM 238

Query: 236 -RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
              EG+  D +TV +ILPVCA    +  G+ IH   VK GL   + V+N ++ MY+K G 
Sbjct: 239 LGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGY 298

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG--IQPDLLTLVSLT 352
           +  A   F +   ++VVSWN++I+A+    D   A      MQ  G  ++ + +T++++ 
Sbjct: 299 LNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVL 358

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                    R+ + +HG+  R  +  + V + NA +  YAK G +NSA  VF G+  K V
Sbjct: 359 PACLDKLQLRSLKELHGYSFRHCF--QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTV 416

Query: 413 ISWNTLITGYAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            SWN LI G+AQNG   +A+  +FQM     +  P+  T  S+L A +H+ +L+ G +IH
Sbjct: 417 SSWNALIGGHAQNGDPRKALHLLFQMTYSGQQ--PDWFTISSLLLACAHLKSLQYGKEIH 474

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
             V++N L  D FV T L+  Y  CG+   A  LF ++   + V WNA+IS +  +G   
Sbjct: 475 GYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPY 534

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC- 590
           ++L  FR+ L EG++   I  VS+  ACS    +  G+     + +   ++      GC 
Sbjct: 535 ESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK--ALQTEDAFVGCS 592

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           ++D++ ++G +  +      +  +  AS W A++ A  IHG+
Sbjct: 593 IIDMYAKSGCIKESRKVFDGLKDKNVAS-WNAIIVAHGIHGH 633



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 5/276 (1%)

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           D    R +H F+     +  D ++   ++ MYA  G    +  VF+ +  K++I WN L+
Sbjct: 58  DIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALV 117

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           +GY +NGL  + ++VF  +    +  P+  T+ S++ A   +  +R G  IH  VIK  L
Sbjct: 118 SGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGL 177

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DVFV   LV MYGKCG +D+AM +F  +P ++ V WN++I     +G    + +   +
Sbjct: 178 VLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLME 237

Query: 540 ML-DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           ML +EG+ PD +T V++L  C+  G V  G    H +  + G+   +     MV ++ + 
Sbjct: 238 MLGEEGLLPDVVTVVTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKC 296

Query: 599 GHLGMAH-NFIQNMPVRPDASIWGALLGACRIHGNM 633
           G+L  A  +F++N     +   W  ++ A  + G++
Sbjct: 297 GYLNEAQMSFVKNN--NKNVVSWNTMISAFSLEGDV 330


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 290/780 (37%), Positives = 411/780 (52%), Gaps = 122/780 (15%)

Query: 46  REIDFDDLFQSCTKLHHVKRLHALLVVSG-----KIKTVFSSTKLVNFYANLGDLSFSRH 100
           R I   D +   T LH +    +L    G      ++   +   +++ +AN G +S +RH
Sbjct: 93  RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD    ++  +WN M++ YVR GR+ EA   F   T                       
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----------------------- 189

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                         EWD     +L+  Y ++G  + AR+LFD MP RD  SWN M+SGY 
Sbjct: 190 --------------EWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 235

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           + G+ VEA  + D          P+                                ++F
Sbjct: 236 RRGDMVEARRLFDAA--------PVR-------------------------------DVF 256

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
               +++ YA+ GM+  A RVFD M ER+ VSWN+++AAY Q      A   F  M    
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP--- 313

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
                               CRN  S         W        N ++  YA+ G++  A
Sbjct: 314 --------------------CRNVAS---------W--------NTMLTGYAQAGMLEEA 336

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
            AVF+ +P KD +SW  ++  Y+Q G + E +++F  M  C E   N+  +  +L   + 
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCAD 395

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + AL  G+++H R+I+       FV   L+ MY KCG ++DA + F ++     V WN +
Sbjct: 396 IAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  HG G +AL  F  M     +PD IT V +L ACSHSGLV +G  YF+ M  +FG
Sbjct: 456 IAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFG 515

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           +    +HY CM+DL GRAG L  AH+ +++MP  PD+++WGALLGA RIH N ELG  A+
Sbjct: 516 VTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAA 575

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +++FE++ EN G YVL+SNIYA+ GKW    ++R +  +RG+KK PG+S IEV NKV  F
Sbjct: 576 EKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTF 635

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+  HP+ EKIY  L +L  +MK  GYV     VL DVEE+EKEH+L  HSE+LA+A+
Sbjct: 636 SAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAY 695

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GI++ PP  PI++ KNLRVCGDCHN  K+IS I  R I++RDSNRFHHF+ G CSCGDYW
Sbjct: 696 GILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 214/476 (44%), Gaps = 64/476 (13%)

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            E +V  +   +  + R G    A +LF  MP R + ++NAM++GY  +G          
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG---------- 83

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL--EFNLF---------VS 282
             RL      P+  AS+     R DN     L+H   V   L     LF           
Sbjct: 84  --RL------PLA-ASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTY 134

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N +I+ +A  G++  A   FD   E+D VSWN ++AAY ++     A G F +  +    
Sbjct: 135 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW--- 191

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D ++  +L S   Q      +R +   +  R     DV+  N +V  YA+ G +  A  
Sbjct: 192 -DAISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARR 245

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+  PV+DV +W  +++GYAQNG+  EA  VF  M E N ++ N     +++ AY    
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWN-----AMVAAY---- 296

Query: 463 ALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +++ +   A+ + N + C +V     ++  Y + G +++A ++F  +P+  +V W A++
Sbjct: 297 -IQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAML 355

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFG 580
           + +   G  ++ L  F +M   G   +   F  +L+ C+    +  G Q +  +++  +G
Sbjct: 356 AAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYG 415

Query: 581 IKPHLKHYGCMVD-----LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +       GC V      ++ + G++  A N  + M  R D   W  ++     HG
Sbjct: 416 V-------GCFVGNALLAMYFKCGNMEDARNAFEEMEER-DVVSWNTMIAGYARHG 463



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/261 (19%), Positives = 113/261 (43%), Gaps = 21/261 (8%)

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G    +VI  N  +  + + G +  A  +F  +P +   ++N ++ GY+ NG    A  +
Sbjct: 32  GRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMY 493
           F+ +       P+  +Y ++L A +   +L     +   + +++ + ++V +++     +
Sbjct: 92  FRAIPR-----PDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----H 141

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
              G +  A   F   P   +V WN +++ +  +G+ ++A    R + +     D I++ 
Sbjct: 142 ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDAISWN 197

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           +L++     G +SE +  F  M         +  +  MV  + R G +  A       PV
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAPV 252

Query: 614 RPDASIWGALLGACRIHGNME 634
           R D   W A++     +G +E
Sbjct: 253 R-DVFTWTAVVSGYAQNGMLE 272


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 286/702 (40%), Positives = 413/702 (58%), Gaps = 35/702 (4%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLFDDMPVRDS 209
           +L  C+++   K+IH  ++K G    +F  + L+      R G  + A  LF+ +   + 
Sbjct: 35  LLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNL 94

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             WN+MI G   S +   AL     M   GV  +  T   +L  CA+  +   G  IH +
Sbjct: 95  FIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAH 154

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ------------------------- 304
           ++K G   ++F+  +LINMYA+ G M +A  VFDQ                         
Sbjct: 155 VLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRA 214

Query: 305 ------MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
                 M  +DVVSWN++IA Y Q      A   F  M++A + P+  T+VS+ S  AQ 
Sbjct: 215 RQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQS 274

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           N      S+  +I  RG    ++ + NA++DMY+K G + +A  +F+ +  +DVISWN +
Sbjct: 275 NALDLGNSMRSWIEDRG-LCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVM 333

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I GY       EA+ +F+ M   + + P + T++SILP+ +H+GA+  G  IHA + KN 
Sbjct: 334 IGGYTHMCSYKEALALFREML-ASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
                 ++T L+D+Y KCG I  A  +F  +   S   WNA+I    +HGQ DKA   F 
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M  +G+ P+ ITFV +L+AC H+GLV  GQ++F  M +++ I P  +HYGCM+DL GRA
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRA 512

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G    A + +QNM V+PD +IWG+LLGACR HG +ELG + ++RLFE++ +N G YVL+S
Sbjct: 513 GLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLS 572

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           NIYA  GKW+ V  +R+   DRG+KK PG ++IEV+N V  F  G++ HP+ E IY  L 
Sbjct: 573 NIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLE 632

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            +  ++K  G+V D S VL D++E+ KE  L+ HSE+LAIAFG+IS+ P +PI+I KNLR
Sbjct: 633 EVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLR 692

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           VC +CH+ TK IS+I  REII RD NRFHHFKDG CSC DYW
Sbjct: 693 VCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 168/519 (32%), Positives = 274/519 (52%), Gaps = 49/519 (9%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L   C  +   K++HA ++ +G   T+F+ +KL+ F A    GD+S++   F+ I   N+
Sbjct: 35  LLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNL 94

Query: 111 YTWNSMISVYVRCGRLSEAVD-CFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIH 166
           + WNSMI        LS A+   F+   + SG+ P+ YTFP +LK+C  L    +GK+IH
Sbjct: 95  FIWNSMIRGLSMS--LSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 167 CSVLKLGFEWDVFVAASLLHMYCR-------------------------------FGLAN 195
             VLKLGF  DVF+  SL++MY +                               +G  +
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR+LFD+MPV+D  SWNAMI+GY Q G + EAL + ++MR   V  +  T+ S+L  CA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +S+ +  G  +  +I   GL  NL + N LI+MY+K G ++ A  +FD M+ERDV+SWN 
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  Y        A   F  M  +G++P  +T +S+    A L      + +H +I  + 
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYI-NKN 391

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +      +  +++D+YAK G I +A  VF+G+ +K + SWN +I G A +G A +A E+F
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVD 491
             M   + I PN+ T+V IL A  H G +  G +  + ++++   + +   +    C++D
Sbjct: 452 SKMSS-DGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD---YKISPKSQHYGCMID 507

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
           + G+ G  ++A SL   +  +     W +++     HG+
Sbjct: 508 LLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGR 546



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 211/432 (48%), Gaps = 44/432 (10%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMER 308
           L + ++  +I +   IH +I+K GL   LF  + LI   A  + G + +A+ +F+ + E 
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           ++  WNS+I     S  P  A  FF  M  +G++P+  T   L    A+L      + +H
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG---------------------- 406
             +++ G F+ DV I  ++++MYA+ G +N+A  VF+                       
Sbjct: 153 AHVLKLG-FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 407 ---------LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                    +PVKDV+SWN +I GYAQ G + EA+ +F+ M + N + PN+ T VS+L A
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN-VPPNESTIVSVLSA 270

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +   AL  G  + + +    LC ++ +   L+DMY KCG +  A  LF  +     + W
Sbjct: 271 CAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISW 330

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           N +I  +       +AL  FR+ML  GV P  ITF+S+L +C+H G +  G+     + +
Sbjct: 331 NVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINK 390

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            F           ++DL+ + G++  A      M ++  AS W A++    +HG      
Sbjct: 391 NFNSVSTSLSTS-LIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMICGLAMHGQ----- 443

Query: 638 VASDRLFEVDSE 649
             +D+ FE+ S+
Sbjct: 444 --ADKAFELFSK 453



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 238/539 (44%), Gaps = 75/539 (13%)

Query: 44  ESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDL----- 95
           E     F  L +SC KL   H  K++HA ++  G +  VF  T L+N YA  G++     
Sbjct: 126 EPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQL 185

Query: 96  -----------SFS---------------RHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
                      SF+               R  FD +  ++V +WN+MI+ Y + GR  EA
Sbjct: 186 VFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEA 245

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVD-GKKIHCSVLKLGFEWDVFVAASLLH 186
           +  F      + + P+  T   VL AC   N +D G  +   +   G   ++ +  +L+ 
Sbjct: 246 LLLFEDMR-KANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALID 304

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY + G    AR+LFDDM  RD  SWN MI GY    +  EAL +  EM   GV    IT
Sbjct: 305 MYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEIT 364

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
             SILP CA    I  G  IH YI K+    +  +S +LI++YAK G +  A +VFD M 
Sbjct: 365 FLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK 424

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            + + SWN++I           A   F+ M   GI+P+ +T V +      L+ C+++  
Sbjct: 425 IKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGI------LSACKHAGL 478

Query: 367 VHGFIMRRGWFMEDVIIG------NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
           V          ++D  I         ++D+  + G+   A ++ + + VK D   W +L+
Sbjct: 479 VDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538

Query: 420 TGYAQNGLASEAIEVFQMM-EECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARV--- 474
                +G     +E+ +++ E   E+ P N G YV +   Y+  G      +I  R+   
Sbjct: 539 GACRDHG----RVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDR 594

Query: 475 ----IKNCLCFDV--FVATCLV---------DMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
               +  C   +V   V   LV         D+Y     +D+ + +F  V  +S V ++
Sbjct: 595 GMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYD 653


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/776 (35%), Positives = 449/776 (57%), Gaps = 15/776 (1%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           + D  + C  L  V+++H    +SG     VF   ++V  Y   G ++ +R  FD I+ +
Sbjct: 30  YRDALRQCQDLESVRQIHDR--ISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARK 87

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKI 165
           N Y+W SM++ Y + G    A+D + +  L    +P+   +  VL AC   + L +GK I
Sbjct: 88  NDYSWGSMLTAYAQNGHYRAALDLYKRMDL----QPNPVVYTTVLGACASIKALEEGKAI 143

Query: 166 HCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           H  +    G + DV +  SLL MY + G    A++LF+ M  R   SWNAMI+ Y QSG+
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGH 203

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EA+ + ++M +E       T  S+L  C+    +  G  IH  I   G E +L + N 
Sbjct: 204 FEEAIRLYEDMDVEPSVR---TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNA 260

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+ MYA+   +  A ++F ++  RDVVSW+++IAA+ +++    A  F++ MQ  G++P+
Sbjct: 261 LLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 320

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
             T  S+    A + D R  R+VH  I+  G+ +  ++ G A+VD+Y   G ++ A ++F
Sbjct: 321 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT-LVNGTALVDLYTSYGSLDEARSLF 379

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +  +D   W  LI GY++ G  +  +E+++ M+   ++   +  Y  ++ A + +GA 
Sbjct: 380 DQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAF 439

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
               + H+ +  + +  D  +AT LV+MY + G ++ A  +F ++    ++ W  +I+ +
Sbjct: 440 ADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGY 499

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             HG+   AL  +++M  EG  P  +TF+ +L ACSH+GL  +G++ F  +Q ++ + P+
Sbjct: 500 AKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPN 559

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           + HY C++DL  RAG L  A   I  MPV P+   W +LLGA RIH +++    A+ ++ 
Sbjct: 560 IAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQIT 619

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           ++D  +   YVL+SN++A  G   G+  VR+    RG+KK  G S IEV +++  F  G+
Sbjct: 620 KLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGD 679

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
            +HP++++I+ EL+ L+ K+K  GYVP+   VL DV E EKE +L  HSE+LAIAFG+I+
Sbjct: 680 NSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIA 739

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + P + ++IF  LR+C DCH+  KFIS I  REIIVRDS+RFH F+DG CSCGDYW
Sbjct: 740 TAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/683 (40%), Positives = 405/683 (59%), Gaps = 9/683 (1%)

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P   TF  +LK C    +L  G+ +H  +   G   +   + +L +MY +      AR++
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE--GVSMDPITVASILPVCARSD 258
           FD MP RD  +WNA+++GY ++G    A++ +  M+ E  G   D +T+ S+LP CA + 
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            + +   +H + ++ GL+  + VS  +++ Y K G +  A  VFD M  R+ VSWN++I 
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y  + +   A   F  M Q G+     ++++      +L      R VH  ++R G   
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG-LS 252

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV-ISWNTLITGYAQNGLASEAIEVFQM 437
            +V + NA++  YAK    + A  VF  L  K   ISWN +I G+ QN    +A  +F  
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M+  N + P+  T VS++PA + +    Q   IH   I++ L  DV+V T L+DMY KCG
Sbjct: 313 MQLEN-VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCG 371

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           R+  A  LF        + WNA+I  +G HG G  A+  F +M   G  P+  TF+S+L 
Sbjct: 372 RVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLA 431

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSH+GLV EGQ+YF  M++++G++P ++HYG MVDL GRAG L  A +FI+NMP+ P  
Sbjct: 432 ACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGI 491

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
           S++GA+LGAC++H N+EL   ++  +FE+  E   Y+VL++NIYAN   W+ V  VR+  
Sbjct: 492 SVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAM 551

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
             +GL+KTPGWS I++ N+V  FY+G+  H   + IY  L  L  ++K +GYVPD   + 
Sbjct: 552 EKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI- 610

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            DVE+D K  +L +HSE+LAIA+G+I + P + IQI KNLRVC DCHN TK IS +T RE
Sbjct: 611 HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGRE 670

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RD  RFHHFKDG CSCGDYW
Sbjct: 671 IIMRDIQRFHHFKDGKCSCGDYW 693



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/470 (32%), Positives = 246/470 (52%), Gaps = 11/470 (2%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L + C     L   + +HA L   G      +ST L N Y      + +R  FD + 
Sbjct: 19  FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMP 78

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFT-LTSGLRPDFYTFPPVLKAC---RNLVDG 162
            R+   WN++++ Y R G  S A++   +      G RPD  T   VL AC   R L   
Sbjct: 79  SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHAC 138

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           +++H   L+ G +  V V+ ++L  YC+ G    AR +FD MPVR+S SWNAMI GY  +
Sbjct: 139 REVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADN 198

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           GNA EA+ +   M  EGV +   +V + L  C     +     +H  +V+ GL  N+ V+
Sbjct: 199 GNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVT 258

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDV-VSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           N LI  YAK      A +VF+++  +   +SWN++I  + Q+  P  A   F  MQ   +
Sbjct: 259 NALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENV 318

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD  TLVS+   VA ++D   +R +HG+ +R     +DV +  A++DMY+K G ++ A 
Sbjct: 319 RPDSFTLVSVIPAVADISDPLQARWIHGYSIRH-QLDQDVYVLTALIDMYSKCGRVSIAR 377

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+    + VI+WN +I GY  +G    A+E+F+ M+    + PN+ T++S+L A SH 
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSL-PNETTFLSVLAACSHA 436

Query: 462 GALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           G + +G K  A + K+  L   +     +VD+ G+ G++D+A S    +P
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMP 486



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 200/405 (49%), Gaps = 17/405 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           LH  + +HA  + +G  + V  ST +++ Y   G +  +R  FD +  RN  +WN+MI  
Sbjct: 135 LHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
           Y   G  +EA+  F++  +  G+     +    L+AC  L    + +++H  ++++G   
Sbjct: 195 YADNGNATEAMALFWRM-VQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG-SWNAMISGYCQSGNAVEALDILDEM 235
           +V V  +L+  Y +   A++A ++F+++  + +  SWNAMI G+ Q+    +A  +   M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           +LE V  D  T+ S++P  A   + L    IH Y ++H L+ +++V   LI+MY+K G +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             A R+FD   +R V++WN++I  Y        A   F  M+  G  P+  T +S+ +  
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           +        +      M++ + +E  +     +VD+  + G ++ A +  + +P++  IS
Sbjct: 434 SHAGLVDEGQKYFAS-MKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGIS 492

Query: 415 WNTLITG----YAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
               + G    +    LA E+ ++        E+ P +G Y  +L
Sbjct: 493 VYGAMLGACKLHKNVELAEESAQII------FELGPEEGVYHVLL 531


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 279/736 (37%), Positives = 431/736 (58%), Gaps = 8/736 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++     G+   +   F  +  R+V++WN M+  Y + G L EA+D +++  L +G RP
Sbjct: 135 MLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRM-LWAGARP 193

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL++C  + D   G+++H  VL+ G   +V V  +L+ MY + G    ARK+F
Sbjct: 194 DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVF 253

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D M + D  SWNAMI+G+ ++      L++   M  + V  + +T+ S+        ++ 
Sbjct: 254 DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
               IH   VK G   ++   N+LI MY+  G M  A  VF +M  RD +SW ++I+ YE
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYE 373

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +  M+   + PD +T+ S  +  A L        +H     +G F+  +
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKG-FIRYI 432

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++ NA+V+MYAK  II  A  VF+ +P KDVISW+++I G+  N    EA+  F+ M   
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM--L 490

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            ++ PN  T+++ L A +  G+LR G +IHA V++  +  + +V   L+D+Y KCG+   
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F        V WN +++    HG GD AL+FF +ML+ G  PD +TFV+LL  CS 
Sbjct: 551 AWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSR 610

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +G+VS+G   FH M E++ I P+LKHY CMVDL  R G L   +NFI  MP+ PDA++WG
Sbjct: 611 AGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWG 670

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL  CRIH N+ELG +A+  + E++  + GY+VL+S++YA+ G W  V +VR   R +G
Sbjct: 671 ALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKG 730

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L+   G S +EV   +  F T + +HP+ ++I D L  +  +MK+ G+ P +S+ L+D +
Sbjct: 731 LEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLED-K 789

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E  K+ +L  HSERLA+AFG+I++ P + I + KN   C  CH   + IS+I  REI VR
Sbjct: 790 EVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVR 849

Query: 802 DSNRFHHFKDGICSCG 817
           D+  FHHF+DG CSCG
Sbjct: 850 DTKEFHHFRDGSCSCG 865



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 247/465 (53%), Gaps = 7/465 (1%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           ++L M  RFG    A K+F  MP RD  SWN M+ GY ++G   EALD+   M   G   
Sbjct: 134 AMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARP 193

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T   +L  C    ++  G  +H ++++ GL   + V N L+ MYAK G +  A +VF
Sbjct: 194 DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVF 253

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M   D +SWN++IA + ++++       F  M +  ++P+L+T+ S+T     L+D  
Sbjct: 254 DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +H   ++RG F  DV   N+++ MY+ LG +  AC VF  +  +D +SW  +I+GY
Sbjct: 314 FAKEIHALAVKRG-FATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+EV+ +M E N ++P+  T  S L A + +G L  GIK+H           
Sbjct: 373 EKNGFPDKALEVYALM-EVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           + VA  LV+MY K   I+ A+ +F  +P    + W+++I+    + +  +AL +FR ML 
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLA 491

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           + V+P+ +TF++ L AC+ +G +  G+  + H++++    + ++ +   ++DL+ + G  
Sbjct: 492 D-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPN--ALLDLYVKCGQT 548

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           G A         + D   W  +L     HG+ ++     + + E 
Sbjct: 549 GYAWAQFGAHGTK-DVVSWNIMLAGFVAHGHGDIALSFFNEMLET 592



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 234/469 (49%), Gaps = 9/469 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HA ++  G    V     LV  YA  GD+  +R  FD +S  +  +WN+MI+ +   
Sbjct: 215 REVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFEN 274

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
                 ++ F    L   + P+  T   V  A   L D    K+IH   +K GF  DV  
Sbjct: 275 HECEAGLELFLHM-LEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAF 333

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY   G    A  +F  M  RD+ SW AMISGY ++G   +AL++   M +  V
Sbjct: 334 CNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNV 393

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D +TVAS L  CA    +  G+ +H      G    + V+N L+ MYAK  ++  A+ 
Sbjct: 394 SPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIE 453

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M ++DV+SW+S+IA +  ++    A  +F  M  A ++P+ +T ++  +  A    
Sbjct: 454 VFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAATGS 512

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R  + +H  ++R+G    +  + NA++D+Y K G    A A F     KDV+SWN ++ 
Sbjct: 513 LRCGKEIHAHVLRQG-IASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLA 571

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCL 479
           G+  +G    A+  F  M E  E +P++ T+V++L   S  G + QG ++ H+   K  +
Sbjct: 572 GFVAHGHGDIALSFFNEMLETGE-HPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSI 630

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
             ++    C+VD+  + GR+ +  +   ++P    +  W A+++   IH
Sbjct: 631 VPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIH 679



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 182/363 (50%), Gaps = 6/363 (1%)

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
           HG  F L + N +++M  +FG   HA +VF +M ERDV SWN ++  Y ++     A   
Sbjct: 124 HG-TFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDL 182

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M  AG +PD+ T   +      + D    R VH  ++R G  +E V + NA+V MYA
Sbjct: 183 YHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVE-VDVLNALVTMYA 241

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G + +A  VF+G+ + D ISWN +I G+ +N      +E+F  M E +E+ PN  T  
Sbjct: 242 KCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLE-DEVEPNLMTIT 300

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+  A   +  L    +IHA  +K     DV     L+ MY   GR+ +A ++F ++   
Sbjct: 301 SVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETR 360

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
            ++ W A+IS +  +G  DKAL  +  M    V PD +T  S L AC+  G +  G +  
Sbjct: 361 DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIK-L 419

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACRIHG 631
           H +    G   ++     +V+++ ++  +  A    + MP + D   W +++ G C  H 
Sbjct: 420 HELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDK-DVISWSSMIAGFCFNHK 478

Query: 632 NME 634
           N E
Sbjct: 479 NFE 481



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 174/379 (45%), Gaps = 28/379 (7%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L   K +HAL V  G    V     L+  Y++LG +  +   F  +  R+  +W +MI
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMI 369

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGF 174
           S Y + G   +A++  Y     + + PD  T    L AC     L  G K+H      GF
Sbjct: 370 SGYEKNGFPDKALE-VYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF 428

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
              + VA +L+ MY +  +   A ++F  MP +D  SW++MI+G+C +    EAL     
Sbjct: 429 IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRH 488

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M L  V  + +T  + L  CA + ++  G  IH ++++ G+    +V N L+++Y K G 
Sbjct: 489 M-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ 547

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
             +A   F     +DVVSWN ++A +        A  FF  M + G  PD +T V+L   
Sbjct: 548 TGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALL-- 605

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFM------EDVIIGN-----AVVDMYAKLGIINSACAV 403
                 C  SR+    ++ +GW +      +  I+ N      +VD+ +++G +      
Sbjct: 606 ------CGCSRA---GMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNF 656

Query: 404 FEGLPVK-DVISWNTLITG 421
              +P+  D   W  L+ G
Sbjct: 657 INRMPITPDAAVWGALLNG 675


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 284/687 (41%), Positives = 409/687 (59%), Gaps = 28/687 (4%)

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+ YTFP  LKAC  L D   G+ IH   +  G + D+FV+ +LL MY +      A  +
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSD 258
           F  MP RD  +WNAM++GY   G    A+  L  M+++   + P   T+ ++LP+ A+  
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 259 NILSGLLIHLYIVKHGLEFN----------LFVSNNLINMYAKFGMMRHALRVFDQMMER 308
            +  G  +H Y ++  L  N          + +   L++MYAK G + +A RVFD M  R
Sbjct: 128 ALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR 187

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC------R 362
           + V+W+++I  +   +    A   F  M   G     L  +S TSI + L  C      R
Sbjct: 188 NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG-----LCFLSPTSIASALRACASLDHLR 242

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               +H  + + G    D+  GN+++ MYAK G+I+ A A+F+ + VKD +S++ L++GY
Sbjct: 243 MGEQLHALLAKSG-VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 301

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            QNG A EA  VF+ M+ CN + P+  T VS++PA SH+ AL+ G   H  VI   L  +
Sbjct: 302 VQNGRAEEAFLVFKKMQACN-VEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             +   L+DMY KCGRID +  +F  +P    V WN +I+ +GIHG G +A   F +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G  PD +TF+ LL+ACSHSGLV EG+ +FH+M   +G+ P ++HY CMVDL  R G L 
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+ FIQ+MP+R D  +W ALLGACR++ N++LG   S  + E+  E  G +VL+SNIY+
Sbjct: 481 EAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYS 540

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             G+++   EVR + + +G KK+PG S IE+N  +  F  G+++HP+  +IY EL N+  
Sbjct: 541 AAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILV 600

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
            +K LGY PD SFVLQD+EE+EKE  L  HSE+LAIA+GI+S      I + KNLRVCGD
Sbjct: 601 GIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGD 660

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHF 809
           CH   K IS +  R IIVRD+NRFHHF
Sbjct: 661 CHTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 251/519 (48%), Gaps = 25/519 (4%)

Query: 50  FDDLFQSCTKL--HHVKR-LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F    ++C+ L  HH  R +H   + +G    +F ST L++ Y     L  + H F  + 
Sbjct: 13  FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 72

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFP---PVLKACRNLVDG 162
            R++  WN+M++ Y   G    AV       +    LRP+  T     P+L     L  G
Sbjct: 73  ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 132

Query: 163 KKIHCSVLKLGFEWD----------VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
             +H   ++     +          V +  +LL MY + G    AR++FD MP R+  +W
Sbjct: 133 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 192

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIV 271
           +A+I G+       +A  +   M  +G+  + P ++AS L  CA  D++  G  +H  + 
Sbjct: 193 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 252

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K G+  +L   N+L++MYAK G++  A+ +FD+M  +D VS++++++ Y Q+     A  
Sbjct: 253 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 312

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  MQ   ++PD  T+VSL    + L   ++ R  HG ++ RG   E  I  NA++DMY
Sbjct: 313 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC-NALIDMY 371

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G I+ +  VF  +P +D++SWNT+I GY  +GL  EA  +F  M       P+  T+
Sbjct: 372 AKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTF 430

Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           + +L A SH G + +G    H       L   +    C+VD+  + G +D+A      +P
Sbjct: 431 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMP 490

Query: 511 -RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGV 545
            R+    W A++    ++     G K     +++  EG 
Sbjct: 491 LRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT 529



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 203/422 (48%), Gaps = 46/422 (10%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V   T L++ YA  G L ++R  FD +  RN  TW+++I  +V C R+++A    ++  L
Sbjct: 158 VLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAF-LLFKAML 216

Query: 139 TSG---LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             G   L P   +    L+AC +L     G+++H  + K G   D+    SLL MY + G
Sbjct: 217 AQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAG 274

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           L + A  LFD+M V+D+ S++A++SGY Q+G A EA  +  +M+   V  D  T+ S++P
Sbjct: 275 LIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+    +  G   H  ++  GL     + N LI+MYAK G +  + +VF+ M  RD+VS
Sbjct: 335 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 394

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++IA Y        A   F  M   G  PD +T + L      L+ C +S  V   I 
Sbjct: 395 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL------LSACSHSGLV---IE 445

Query: 373 RRGWF------------MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
            + WF            ME  I    +VD+ ++ G ++ A    + +P++ DV  W  L+
Sbjct: 446 GKHWFHVMGHGYGLTPRMEHYI---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502

Query: 420 TG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARVI 475
                Y    L  +   + Q      E+ P   G +V +   YS  G   +  ++  R+I
Sbjct: 503 GACRVYKNIDLGKKVSRMIQ------ELGPEGTGNFVLLSNIYSAAGRFDEAAEV--RII 554

Query: 476 KN 477
           + 
Sbjct: 555 QK 556



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 14/196 (7%)

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           + + PN  T+   L A S +     G  IH   I   L  D+FV+T L+DMY KC  + D
Sbjct: 4   HRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPD 63

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF--RQMLDEGVRPDHITFVSLLTAC 559
           A  +F  +P    V WNA+++ +  HG    A+      QM    +RP+  T V+LL   
Sbjct: 64  AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYG----------CMVDLFGRAGHLGMAHNFIQ 609
           +  G +++G    H       + P+                ++D++ + G L  A     
Sbjct: 124 AQQGALAQGTS-VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 182

Query: 610 NMPVRPDASIWGALLG 625
            MP R + + W AL+G
Sbjct: 183 AMPARNEVT-WSALIG 197


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/729 (38%), Positives = 417/729 (57%), Gaps = 6/729 (0%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +  +   F  +  +N  +WN++++ Y + G   + +  F +          F T   VLK
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKF-TLSTVLK 59

Query: 155 ACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
            C N   L +GK +H   L+ G E D F+  SL+ MY + G    A K+F  +   D  +
Sbjct: 60  GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           W+AMI+G  Q G+  EA ++   MR +G   +  T++S++       ++  G  IH  I 
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K+G E +  VSN LI MY K   +    +VF+ M   D+VSWN++++ +  S        
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  M   G +P++ T +S+    + L D    + VH  I++     +D  +G A+VDMY
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNS-SDDDDFVGTALVDMY 298

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK   +  A   F+ L  +D+ SW  +I+GYAQ   A +A++ F+ M+    I PN+ T 
Sbjct: 299 AKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR-EGIKPNEYTL 357

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S L   SH+  L  G ++HA  +K     D+FV + LVD+YGKCG ++ A ++F  +  
Sbjct: 358 ASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLIS 417

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V WN IIS +  HGQG+KAL  FR ML EG+ PD  TF+ +L+ACS  GLV EG++ 
Sbjct: 418 RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKR 477

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F  M + +GI P ++HY CMVD+ GRAG       FI+ M + P + IW  +LGAC++HG
Sbjct: 478 FDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHG 537

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           N++ G  A+ +LFE++      Y+L+SNI+A+ G+W+ V  +R+L   RG+KK PG S +
Sbjct: 538 NVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWV 597

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           EV+ +V +F + + +HPK  +IY +L  L   + S+GYVP    VL +V   EK   L  
Sbjct: 598 EVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYY 657

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSERLA++F ++S+    PI+IFKNLR+C DCH++ K IS IT +EI+VRD  RFHHFK 
Sbjct: 658 HSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKR 717

Query: 812 GICSCGDYW 820
           G CSC D W
Sbjct: 718 GTCSCQDRW 726



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 4/297 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L + + +H  +   G       S  L+  Y     +      F+ ++  ++ +WN+++S 
Sbjct: 168 LRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSG 227

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           +            FYQ  L  G +P+ +TF  VL++C +L+D   GK++H  ++K   + 
Sbjct: 228 FYDSQTCGRGPRIFYQM-LLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDD 286

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D FV  +L+ MY +      A   FD +  RD  SW  +ISGY Q+  A +A+    +M+
Sbjct: 287 DDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ 346

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            EG+  +  T+AS L  C+    + +G  +H   VK G   ++FV + L+++Y K G M 
Sbjct: 347 REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCME 406

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
           HA  +F  ++ RD+VSWN+II+ Y Q      A   F  M   GI PD  T + + S
Sbjct: 407 HAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLS 463



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 7/212 (3%)

Query: 50  FDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC+ L      K++HA ++ +      F  T LV+ YA    L  +   FD + 
Sbjct: 256 FISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLV 315

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            R++++W  +IS Y +  +  +AV  F Q     G++P+ YT    L  C ++    +G+
Sbjct: 316 NRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ-REGIKPNEYTLASCLSGCSHMATLENGR 374

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K G   D+FV ++L+ +Y + G    A  +F  +  RD  SWN +ISGY Q G
Sbjct: 375 QLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHG 434

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCA 255
              +AL+    M  EG+  D  T   +L  C+
Sbjct: 435 QGEKALEAFRMMLSEGIMPDEATFIGVLSACS 466


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 283/736 (38%), Positives = 398/736 (54%), Gaps = 117/736 (15%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++ +AN G +S +RH FD    ++  +WN M++ YVR GR+ EA   F   T       
Sbjct: 12  MISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT------- 64

Query: 145 DFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
                                         EWDV    +L+  Y ++G  + AR+LFD M
Sbjct: 65  ------------------------------EWDVISWNALMSGYVQWGKMSEARELFDRM 94

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P RD  SWN M+SGY + G+ VEA  + D          P+                   
Sbjct: 95  PGRDVVSWNIMVSGYARRGDMVEARRLFDAA--------PVR------------------ 128

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
                        ++F    +++ YA+ GM+  A RVFD M ER+ VSWN+++AAY Q  
Sbjct: 129 -------------DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR 175

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F  M                        CRN  S         W        
Sbjct: 176 MMDEAKELFNMMP-----------------------CRNVAS---------W-------- 195

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N ++  YA+ G++  A AVF+ +P KD +SW  ++  Y+Q G + E +++F  M  C E 
Sbjct: 196 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 255

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
             N+  +  +L   + + AL  G+++H R+I+       FV   L+ MY KCG ++DA +
Sbjct: 256 -VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 314

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
            F ++     V WN +I+ +  HG G +AL  F  M     +PD IT V +L ACSHSGL
Sbjct: 315 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 374

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V +G  YF+ M  +FG+    +HY CM+DL GRAG L  AH+ +++MP  PD+++WGALL
Sbjct: 375 VEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GA RIH N ELG  A++++FE++ EN G YVL+SNIYA+ GKW    ++R +  +RG+KK
Sbjct: 435 GASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKK 494

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG+S IEV NKV  F  G+  HP+ EKIY  L +L  +MK  GYV     VL DVEE+E
Sbjct: 495 VPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEE 554

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KEH+L  HSE+LA+A+GI++ PP  PI++ KNLRVCGDCHN  K+IS I  R I++RDSN
Sbjct: 555 KEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSN 614

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF+ G CSCGDYW
Sbjct: 615 RFHHFRGGSCSCGDYW 630



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 179/412 (43%), Gaps = 60/412 (14%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           L  +  ++ VF+ T +V+ YA  G L  +R  FD +  RN  +WN+M++ Y++   + EA
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEA 180

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
            + F                   +  CRN+                W+     ++L  Y 
Sbjct: 181 KELFN------------------MMPCRNVAS--------------WN-----TMLTGYA 203

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G+   A+ +FD MP +D+ SW AM++ Y Q G + E L +  EM   G  ++    A 
Sbjct: 204 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 263

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  CA    +  G+ +H  +++ G     FV N L+ MY K G M  A   F++M ERD
Sbjct: 264 VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERD 323

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VVSWN++IA Y +      A   F  M+    +PD +TLV +      L  C +S  V  
Sbjct: 324 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGV------LAACSHSGLVEK 377

Query: 370 FIMRRGWFMEDVIIG------NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG- 421
            I        D  +         ++D+  + G +  A  + + +P + D   W  L+   
Sbjct: 378 GISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGAS 437

Query: 422 --YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
             +    L   A E +F++  E      N G YV +   Y+  G  R   K+
Sbjct: 438 RIHRNPELGRSAAEKIFELEPE------NAGMYVLLSNIYASSGKWRDARKM 483



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 22/167 (13%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH  L+ +G     F    L+  Y   G++  +R+ F+ +  R+V +WN+MI+ Y R G
Sbjct: 279 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 338

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------DV 178
              EA++ F     TS  +PD  T   VL AC         H  +++ G  +      D 
Sbjct: 339 FGKEALEIFDMMRTTS-TKPDDITLVGVLAACS--------HSGLVEKGISYFYSMHHDF 389

Query: 179 FVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISG 218
            V A   H  C      R G    A  L  DMP   DS  W A++  
Sbjct: 390 GVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGA 436


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/793 (36%), Positives = 457/793 (57%), Gaps = 18/793 (2%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
           ++SPD       +  F  + ++C  L   +    ++  ++  G    +F    LV+ Y+ 
Sbjct: 101 KVSPD-------KYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSR 153

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
           +G L+ +R  FD +  R++ +WNS+IS Y   G   EA++ +++    S + PD +T   
Sbjct: 154 MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSS 212

Query: 152 VLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           VL A  NL+    G+ +H   LK G    V V   L+ MY +F     AR++FD+M VRD
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S S+N MI GY +     E++ +  E  L+    D +TV+S+L  C    ++     I+ 
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYN 331

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           Y++K G      V N LI++YAK G M  A  VF+ M  +D VSWNSII+ Y QS D + 
Sbjct: 332 YMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME 391

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M     Q D +T + L S+  +L D +  + +H   ++ G  + D+ + NA++
Sbjct: 392 AMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI-DLSVSNALI 450

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G +  +  +F  +   D ++WNT+I+   + G  +  ++V   M + +E+ P+ 
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDM 509

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T++  LP  + + A R G +IH  +++     ++ +   L++MY KCG ++++  +F +
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           + R   V W  +I  +G++G+G+KAL  F  M   G+ PD + F++++ ACSHSGLV EG
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
              F  M+  + I P ++HY C+VDL  R+  +  A  FIQ MP++PDASIW ++L ACR
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
             G+ME     S R+ E++ ++ GY +L SN YA + KW+ V  +R   +D+ + K PG+
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGY 749

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV-EEDEKEH 747
           S IEV   V +F +G+ + P+ E IY  L  L + M   GY+PD   V Q++ EE+EK  
Sbjct: 750 SWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRR 809

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           ++  HSERLAIAFG++++ P +P+Q+ KNLRVCGDCH  TK IS+I  REI+VRD+NRFH
Sbjct: 810 LICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFH 869

Query: 808 HFKDGICSCGDYW 820
            FKDG CSC D W
Sbjct: 870 LFKDGTCSCKDRW 882



 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 193/588 (32%), Positives = 316/588 (53%), Gaps = 16/588 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYT 112
             S + L+ ++R+HAL++  G   + F S KL++ Y++  + + S   F  +S  +NVY 
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WNS+I  + + G   EA++ FY     S + PD YTFP V+KAC  L D   G  ++  +
Sbjct: 74  WNSIIRAFSKNGLFPEALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           L +GFE D+FV  +L+ MY R GL   AR++FD+MPVRD  SWN++ISGY   G   EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +I  E++   +  D  TV+S+LP       +  G  +H + +K G+   + V+N L+ MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFTTMQQAGIQPDLL 346
            KF     A RVFD+M  RD VS+N++I  Y   E   + +    F   + Q   +PDLL
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM--FLENLDQ--FKPDLL 308

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+      L D   ++ ++ ++++ G+ +E   + N ++D+YAK G + +A  VF  
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNS 367

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  KD +SWN++I+GY Q+G   EA+++F+MM    E   +  TY+ ++   + +  L+ 
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKF 426

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  +H+  IK+ +C D+ V+  L+DMY KCG + D++ +F  +    +V WN +IS    
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
            G     L    QM    V PD  TF+  L  C+       G+   H     FG +  L+
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE-IHCCLLRFGYESELQ 545

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
               +++++ + G L  +    + M  R D   W  ++ A  ++G  E
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGE 592



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 241/485 (49%), Gaps = 6/485 (1%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGS 211
           L +  NL + ++IH  V+ LG +   F +  L+  Y  F     +  +F  + P ++   
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN++I  + ++G   EAL+   ++R   VS D  T  S++  CA   +   G L++  I+
Sbjct: 74  WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
             G E +LFV N L++MY++ G++  A +VFD+M  RD+VSWNS+I+ Y        A  
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            +  ++ + I PD  T+ S+      L   +  + +HGF ++ G     V++ N +V MY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG-VNSVVVVNNGLVAMY 252

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K      A  VF+ + V+D +S+NT+I GY +  +  E++ +F  +E  ++  P+  T 
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTV 310

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+L A  H+  L     I+  ++K     +  V   L+D+Y KCG +  A  +F  +  
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
             +V WN+IIS +   G   +A+  F+ M+    + DHIT++ L++  +    +  G+  
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG- 429

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    + GI   L     ++D++ + G +G +     +M    D   W  ++ AC   G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFG 488

Query: 632 NMELG 636
           +   G
Sbjct: 489 DFATG 493


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 290/752 (38%), Positives = 436/752 (57%), Gaps = 15/752 (1%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           +F    L+N Y  +GD   +R  FD +  RN  TW  +IS Y + G   +A     +   
Sbjct: 35  LFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIF 94

Query: 139 TSGLRPDFYTFPPVLKACRNLV----DGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGL 193
             G  P+ + F   ++AC+  +     G+++H   ++ G  +  V V   L++MY + G 
Sbjct: 95  -EGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGD 153

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            + AR +F  M  +DS SWN+MI+G  Q+    +A+   + MR  G+      + S L  
Sbjct: 154 IDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSS 213

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           CA    IL G   H   +K GL+ ++ VSN L+ +YA+   +    +VF  M+ERD VSW
Sbjct: 214 CASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSW 273

Query: 314 NSIIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           N++I A   S   ++ A   F  M +AG  P+ +T ++L + V+ L+  + S  +H  I+
Sbjct: 274 NTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALIL 333

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEA 431
           +     +D  I NA++  Y K G + +   +F  +  + D +SWN++I+GY  N L  +A
Sbjct: 334 KYN-VKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKA 392

Query: 432 IE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           ++ V+ MM+    ++    T+ ++L A + V  L  G+++HA  I+ CL  DV + + LV
Sbjct: 393 MDLVWLMMQRGQRLDCF--TFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALV 450

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMY KCGRID A   F  +P  +   WN++IS +  HG GD AL  F +M   G  PDHI
Sbjct: 451 DMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHI 510

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TFV +L+ACSH GLV EG  YF  M E +G+ P ++HY CMVDL GRAG L    NFI  
Sbjct: 511 TFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINK 570

Query: 611 MPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           MP++P+  IW  +LGA CR +G   ELG  A++ LF +D +N   YVL+SN+YA+ GKWE
Sbjct: 571 MPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWE 630

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            +   R   R+  +KK  G S + + + V +F  G+ +HP+   IY +L+ L  K++  G
Sbjct: 631 DMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAG 690

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVP   F L D+E + KE +L+ HSE+LA+AF +++     PI+I KNLRVCGDCH+  K
Sbjct: 691 YVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFK 749

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IS++ +R I++RDSNRFHHF+DG CSC DYW
Sbjct: 750 YISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/479 (31%), Positives = 248/479 (51%), Gaps = 14/479 (2%)

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           D    H +VLK GF+ D+F+  +L+++Y R G    ARKLFD+MP R+  +W  +ISGY 
Sbjct: 18  DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL---SGLLIHLYIVKHGL-E 276
           Q+G   +A  +L EM  EG   +     S +  C  S  +L    G  +H Y ++ GL +
Sbjct: 78  QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQES--MLWRRKGRQVHGYAIRTGLND 135

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + V N LINMYAK G + HA  VF  M+++D VSWNS+I   +Q+     A   + +M
Sbjct: 136 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           ++ G+ P    L+S  S  A L      +  HG  ++ G  M DV + N ++ +YA+   
Sbjct: 196 RKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDM-DVSVSNTLLALYAETSR 254

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLA-SEAIEVFQMMEECNEINPNQGTYVSIL 455
           +     VF  +  +D +SWNT+I   A +G + SEAIEVF  M      +PN+ T++++L
Sbjct: 255 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAG-WSPNRVTFINLL 313

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
              S +   +   +IHA ++K  +  D  +   L+  YGK G +++   +F ++  R   
Sbjct: 314 ATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDE 373

Query: 515 VPWNAIISCHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
           V WN++IS + IH +   KA++    M+  G R D  TF ++L+AC+    +  G    H
Sbjct: 374 VSWNSMISGY-IHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME-VH 431

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
                  ++  +     +VD++ + G +  A  F   MPVR   S W +++     HG+
Sbjct: 432 ACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYS-WNSMISGYARHGH 489



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 24/191 (12%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C  +  ++    +HA  + +     V   + LV+ Y+  G + ++   F+ + 
Sbjct: 411 FATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMP 470

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RN+Y+WNSMIS Y R G    A+  F +  L SG  PD  TF  VL AC         H
Sbjct: 471 VRNLYSWNSMISGYARHGHGDNALRLFTRMKL-SGQLPDHITFVGVLSACS--------H 521

Query: 167 CSVLKLGFEW-----DVF-VAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNA 214
             ++  GFE+     +V+ +   + H  C      R G  +      + MP++ +     
Sbjct: 522 IGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWR 581

Query: 215 MISGYCQSGNA 225
            + G C  GN 
Sbjct: 582 TVLGACCRGNG 592


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 270/648 (41%), Positives = 400/648 (61%), Gaps = 12/648 (1%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D FVA++L  +Y      + ARK+FD +P  D+  WN +++G   S    EA++    M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 237 LEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            +G V  D  T+AS+LP  A   ++  G  +H +  K GL  +  V   LI++Y+K G +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             A  +FD M + D+V++N++I+ Y  +    ++   FT +   G+ P+  TLV+L  + 
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           +       ++ +HGF+++ G F  +  +  A+  ++ +L  + SA   F+ +P K + SW
Sbjct: 324 SPFGHDLLAQCLHGFVLKSG-FTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESW 382

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N +I+GYAQNGL   A+ +F+ M + N + PN  T  S L A + +GAL  G  +H  + 
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLN-VRPNPITISSTLSACAQLGALSLGKWLHRIIT 441

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           +  L  +V+V T L+DMY KCG I +A  +F  +   + V WNA+I+ +G+HGQG +AL 
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALK 501

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            ++ MLD  + P   TF+S+L ACSH GLV EG + F  M +++ I P ++H  CMVDL 
Sbjct: 502 LYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLL 561

Query: 596 GRAGHLGMAHNFIQNMP---VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           GRAG L  A   I   P   V P   +WGALLGAC +H + +L  +AS +LFE+D EN G
Sbjct: 562 GRAGQLKEAFELISEFPKSAVGP--GVWGALLGACMVHKDSDLAKLASQKLFELDPENSG 619

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
           YYVL+SN++ +  ++     VR  A+ R L KTPG++ IE+ NK  +F  G+R HP+ E 
Sbjct: 620 YYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEA 679

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           IY  L  LTAKM   GY P+    L DVEE+EKEH++  HSE+LAIAFG++S+ P + I+
Sbjct: 680 IYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIR 739

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLRVC DCHN TKFIS++T+R I+VRD++RFHHF+DG+CSCGDYW
Sbjct: 740 IIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 237/474 (50%), Gaps = 12/474 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LHAL V +G     F ++ L   Y  L  +  +R  FD +   +   WN++++       
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSG--- 192

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
            SEAV+ F +      +RPD  T   VL A   + D   G+ +H    K G      V  
Sbjct: 193 -SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
            L+ +Y + G    AR LFD M   D  ++NA+ISGY  +G    ++++  E+   G+  
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           +  T+ +++PV +   + L    +H +++K G   N  VS  +  ++ +   M  A + F
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M E+ + SWN++I+ Y Q+     A   F  M +  ++P+ +T+ S  S  AQL    
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             + +H  I        +V +  A++DMYAK G I+ A  +F  +  K+V+SWN +I GY
Sbjct: 432 LGKWLHRIITEED-LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCF 481
             +G  +EA+++++ M + + + P   T++S+L A SH G + +G K+   +  +  +  
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLL-PTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINP 549

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP--WNAIISCHGIHGQGDKA 533
            +   TC+VD+ G+ G++ +A  L  + P+S+  P  W A++    +H   D A
Sbjct: 550 GIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLA 603


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/805 (35%), Positives = 454/805 (56%), Gaps = 43/805 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTF--DHISYR 108
            Q+C  L  +K+LH  ++  G    VF+  KL+     +G    L+++ + F  D  +  
Sbjct: 29  LQTCKTLIELKQLHCNMLKKG----VFNINKLIAACVQMGTHESLNYALNAFKEDEGTKC 84

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKI 165
           ++YT N++I  Y   G   EA+  +    +  G+ PD +TFP +L AC  ++   +G ++
Sbjct: 85  SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  V+K+G   D+FVA SL+H Y   G  ++ RK+FD+M  R+  SW ++I+GY     A
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA+ +  EM   GV  +P+T+   +  CA+  ++  G  +   + + G++ N  V N L
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K G M     +FD+  ++++V +N+I++ Y Q             M Q G +PD 
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T++S  +  AQL D    +S H ++ R G    D I  NA++DMY K G   +AC VF+
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNI-SNAIIDMYMKCGKREAACKVFD 383

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN-------------------- 445
            +  K V++WN+LI G  ++G    A+ +F  M E N ++                    
Sbjct: 384 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 443

Query: 446 ----PNQG------TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
                NQG      T V I  A  ++GAL     I+  + KN +  D+ + T LVDM+ +
Sbjct: 444 LREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSR 503

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG   +AM +F  + +     W A I    + G    A+  F +ML + V+ D   FV+L
Sbjct: 504 CGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVAL 563

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           LTA SH G V +G++ F  M++  G+ P + HYGCMVDL GRAG L  A + +++MP++P
Sbjct: 564 LTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKP 623

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
           +  IWG+ L ACR H N+E    A +++ ++  E VG +VL+SNIYA+ GKW  V  VR 
Sbjct: 624 NDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRL 683

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
             +++G +K  G SSIEV+  +  F +G+ +H +  +I   L+ +  ++  +GYVPD + 
Sbjct: 684 QMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTN 743

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           VL DV+E EKEH+L+ HSE+LA+A+G+I++    PI++ KNLR+C DCH++ K +S++  
Sbjct: 744 VLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSKLYG 803

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           REI VRD+NR+H FK+G CSC D+W
Sbjct: 804 REITVRDNNRYHFFKEGFCSCRDFW 828


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 290/784 (36%), Positives = 423/784 (53%), Gaps = 108/784 (13%)

Query: 144 PDFYTFPPVLKACRNLVD-----------GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           P   +   +L+ C NL+             + +HC V+K G  + V++  +L+++Y + G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 193 LANVARKLFDDMPVR-------------------------------DSGSWNAMISGYCQ 221
            A  ARKLFD+MP+R                               DS SW  MI GY  
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G   +A+ I+ EM  EG+     T+ ++L   A +  + +G  +H +IVK GL  N+ V
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183

Query: 282 SNNLINMYAK-------------------------------FGMMRHALRVFDQMMERDV 310
           SN+L+NMYAK                                G M  A+  F+QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V+WNS+I+ Y Q    + A   F+ M + + + PD  TL S+ S  A L        +H 
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHS 303

Query: 370 FIMRRGWFMEDVIIG--------------------------------NAVVDMYAKLGII 397
            I+  G+ +  +++                                  A++D Y KLG +
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           N A  +F+ L  +DV++W  +I GY Q+GL  EAI +F+ M    E  PN  T  ++L  
Sbjct: 364 NEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV-GEEQRPNSYTLAAMLSV 422

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
            S + +L  G +IH   +K+   + V V+  L+ MY K G I  A   F  +     +V 
Sbjct: 423 ASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVS 482

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W ++I     HG  ++AL  F  ML EG+RPDHIT+V + +AC+H+GLV++G++YF MM+
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +   I P L HY CMVDLFGRAG L  A  FI+ MP+ PD   WG+LL ACR++ N++LG
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLG 602

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
            VA++RL  ++ EN G Y  ++N+Y+  GKWE   ++R   +D  +KK  G+S IEV +K
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F   +  HP+  +IY  ++ +  ++K +GYVPD + VL D+EE+ KE IL  HSE+L
Sbjct: 663 VHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           AIAFG+IS+P K+ ++I KNLRVC DCH   KFIS++  REIIVRD+ RFHHFKDG CSC
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782

Query: 817 GDYW 820
            DYW
Sbjct: 783 RDYW 786



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 206/479 (43%), Gaps = 77/479 (16%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H+ +V  G    V  S  L+N YA  GD   ++  FD +  +++ +WN+MI+++++ 
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQV 225

Query: 124 GRLS-------------------------------EAVDCFYQFTLTSGLRPDFYTFPPV 152
           G++                                 A+D F +    S L PD +T   V
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASV 285

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL--------- 200
           L AC NL     G++IH  ++  GF+    V  +L+ MY R G    AR+L         
Sbjct: 286 LSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345

Query: 201 ------------------------FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
                                   FD +  RD  +W AMI GY Q G   EA+++   M 
Sbjct: 346 KIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV 405

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            E    +  T+A++L V +   ++  G  IH   VK G  +++ VSN LI MYAK G + 
Sbjct: 406 GEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSIT 465

Query: 297 HALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
            A R FD +  ERD VSW S+I A  Q      A   F TM   G++PD +T V + S  
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVIS 414
                    R     +      +  +     +VD++ + G++  A    E +P++ DV++
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585

Query: 415 WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           W +L++    Y    L   A E   ++E       N G Y ++   YS  G   +  KI
Sbjct: 586 WGSLLSACRVYKNIDLGKVAAERLLLLEP-----ENSGAYSALANLYSACGKWEEAAKI 639



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 13/172 (7%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWN 114
           S   L H K++H   V SG+I +V  S  L+  YA  G ++ +   FD I   R+  +W 
Sbjct: 425 SLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWT 484

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKL 172
           SMI    + G   EA++ F +  L  GLRPD  T+  V  AC +  LV+  + +  ++K 
Sbjct: 485 SMIIALAQHGHAEEALELF-ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK- 542

Query: 173 GFEWDVFVA-----ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
             + D  +      A ++ ++ R GL   A++  + MP+  D  +W +++S 
Sbjct: 543 --DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 280/759 (36%), Positives = 448/759 (59%), Gaps = 15/759 (1%)

Query: 73   SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
            SG +  ++  + LV+ +A  G + ++++ F  +SYRNV + N +I   VR  R  EAV+ 
Sbjct: 313  SGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVEL 372

Query: 133  FYQFTLTSGLRPDFY-----TFPPVLKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLLH 186
            F +   +  L P+ Y      FP           G ++H  +++ G     + +   L++
Sbjct: 373  FMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLIN 432

Query: 187  MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
            MY + G  N A  +F  M  +DS +WN+MI+G  Q+   +EA+    EMR   +     T
Sbjct: 433  MYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFT 492

Query: 247  VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
            + S L  CA    I  G  +H   +K GL+ ++ VSN L+ +Y + G ++   + F  M+
Sbjct: 493  MISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552

Query: 307  ERDVVSWNSIIAAYEQSNDP-ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            + D VSWNS+I A   S    + A   F  M +AG  P+ +T +++ + V+ L+     +
Sbjct: 553  DYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGK 612

Query: 366  SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQ 424
             +H  +++R     D  I NA++  Y K G +     +F  +  + D +SWN++I+GY  
Sbjct: 613  QIHALVLKRN-VAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIH 671

Query: 425  NGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            N L  +A++ V+ MM++   ++    T+ ++L A + V  L +G+++H   ++ CL  D+
Sbjct: 672  NELLPKAMDMVWFMMQKGQRLDGF--TFATVLSACATVATLERGMEVHGCSVRACLESDI 729

Query: 484  FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
             + + LVDMY KCGRID A   F  +P  +   WN++IS +  HG G K+L+ F QM  +
Sbjct: 730  VIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQ 789

Query: 544  GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
            G  PDH+TFV +L+ACSH+GLV+EG  +F  M E +G+ P ++H+ CMVDL GR G L  
Sbjct: 790  GPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNK 849

Query: 604  AHNFIQNMPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSENVGYYVLMSNIY 661
              +F+  MPV+P+  IW  +LGA CR +G N  LG  A++ L E++  N   Y+L+SN+Y
Sbjct: 850  MEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMY 909

Query: 662  ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
            A+ GKW+ V + R   R   +KK  G S + + + V +F  G+++HP+ + IY++L+ L 
Sbjct: 910  ASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELN 969

Query: 722  AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             KM+  GY+P+  F L D+E + KE +L+ HSE++A+AF +++ P K PI+I KNLRVCG
Sbjct: 970  GKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCG 1028

Query: 782  DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH+  K+ISQI ER+I++RDSNRFHHF++G CSCGD+W
Sbjct: 1029 DCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/583 (29%), Positives = 290/583 (49%), Gaps = 29/583 (4%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            + LH  L  +G +  +F    L+N YA +GDL   R  FD +  RN+ +W+ +IS Y R
Sbjct: 92  AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-----LVDGKKIHCSVLKLGFEWD 177
               +EA + F +  ++ G  P+ Y F  V++AC+      L  G +IH  + K  +  D
Sbjct: 152 NRMPNEACELFRKM-VSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVND 210

Query: 178 VFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           V  +  L+ MY    G+ + AR+ FD +  R+  S N+MIS YCQ G+AV A DI   M+
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270

Query: 237 LE----GVSMDPITVASIL-PVCARSDN---ILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            E    G+  +  T  S++   C+ +++   +L  LL    + K G   +L+V + L++ 
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTR--VEKSGFLHDLYVGSALVSG 328

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPD--L 345
           +AK G + +A  +F +M  R+VVS N +I    +      A   F  M+ +  + P+  +
Sbjct: 329 FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYM 388

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           + L +        N  R    VH F++R G     + IGN +++MYAK G IN AC VF 
Sbjct: 389 IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR 448

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  KD ++WN++ITG  QN    EA++ FQ M    E+ P+  T +S L + + +G + 
Sbjct: 449 LMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRR-TELYPSNFTMISALSSCASLGWIS 507

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G ++H   +K  L  DV V+  L+ +YG+CG + +    F  +     V WN++I   G
Sbjct: 508 VGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLI---G 564

Query: 526 IHGQGD----KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
                +    +A+  F  M+  G  P+ +TF+++L A S   L   G++  H +  +  +
Sbjct: 565 ALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQ-IHALVLKRNV 623

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
                    ++  +G+ G +G   N    M  R D   W +++
Sbjct: 624 AADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMI 666



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 254/486 (52%), Gaps = 31/486 (6%)

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           D +++H  + K GF  D+F+  +L+++Y R G     RK+FD+MP+R+  SW+ +ISGY 
Sbjct: 91  DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYT 150

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN--ILSGLLIHLYIVKHGLEFN 278
           ++    EA ++  +M  +G   +     S++  C       +  G+ IH  + K     +
Sbjct: 151 RNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVND 210

Query: 279 LFVSNNLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  SN LI+MY    GM+ +A R FD +  R++VS NS+I+ Y Q  D ++A   F+TMQ
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270

Query: 338 QA----GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM--------RRGWFMEDVIIGN 385
           +     G++P+  T  SL S    L +        G ++         +  F+ D+ +G+
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANS-------GLVLLEQLLTRVEKSGFLHDLYVGS 323

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+V  +AK G I  A  +F+ +  ++V+S N LI G  +     EA+E+F  M++  E+N
Sbjct: 324 ALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELN 383

Query: 446 PNQGTYVSILPAYSHVGAL----RQGIKIHARVIKNCLC-FDVFVATCLVDMYGKCGRID 500
           PN  +Y+ IL A+     L    R+G ++HA +I++ L    + +   L++MY KCG I+
Sbjct: 384 PN--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIN 441

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA  +F  +    SV WN++I+    + Q  +A+  F++M    + P + T +S L++C+
Sbjct: 442 DACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCA 501

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
             G +S G++  H    + G+   +     ++ L+G  G++         M +  D   W
Sbjct: 502 SLGWISVGEQ-LHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVSW 559

Query: 621 GALLGA 626
            +L+GA
Sbjct: 560 NSLIGA 565



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 14/139 (10%)

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+   Y +    +   ++H ++ KN    D+F+   L+++Y + G +     +F ++P  
Sbjct: 78  SLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLR 137

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
           + V W+ +IS +  +   ++A   FR+M+ +G  P+H  F S++ AC   G         
Sbjct: 138 NLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG--------- 188

Query: 573 HMMQEEFGIKPHLKHYGCM 591
                E+G+K  ++ +G M
Sbjct: 189 -----EYGLKFGMQIHGLM 202


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/657 (40%), Positives = 404/657 (61%), Gaps = 3/657 (0%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  ++  G + + F+   L++     G    ARKLFD+    D   WNA+I  Y ++ 
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              + +++   MR  GV  D  T   +L  C    +     +IH  I+K+G   ++FV N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+ +YAK G +  A  VFD +  R +VSW SII+ Y Q+   + A   F+ M+  G++P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + LVS+      ++D    RS+HGF+++ G   E  ++  ++   YAK G++  A + 
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALL-ISLTAFYAKCGLVTVAKSF 312

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +   +VI WN +I+GYA+NG A EA+ +F  M   N I P+  T  S + A + VG+
Sbjct: 313 FDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN-IKPDSVTVRSAVLASAQVGS 371

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L     +   V K+    D+FV T L+DMY KCG ++ A  +F +      V W+A+I  
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +G+HGQG +A+N +  M   GV P+ +TF+ LLTAC+HSGLV EG   FH M++ F I P
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD-FEIVP 490

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
             +HY C+VDL GRAG+LG A  FI  +P+ P  S+WGALL AC+I+  + LG  A+++L
Sbjct: 491 RNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKL 550

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
           F +D  N G+YV +SN+YA+   W+ V  VR L R++GL K  G+S IE+N K+  F+ G
Sbjct: 551 FSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVG 610

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +++HP  ++I+DEL+ L  ++K +G+VP    VL D+  +EKE  L+ HSER+A+A+G+I
Sbjct: 611 DKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLI 670

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+ P + ++I KNLR C +CH+  K IS++ EREIIVRD+NRFHHFKDG+CSCGDYW
Sbjct: 671 STAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/487 (32%), Positives = 263/487 (54%), Gaps = 17/487 (3%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  L  + T   H+ ++H  LV+SG     F  TKLVN  +NLG + ++R  FD   Y +
Sbjct: 59  YASLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPD 118

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           V+ WN++I  Y R     + V+  Y++   +G+ PD +TFP VLKAC  L+D      IH
Sbjct: 119 VFMWNAIIRSYSRNNMYRDTVE-MYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIH 177

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             ++K GF  DVFV   L+ +Y + G   VA+ +FD +  R   SW ++ISGY Q+G AV
Sbjct: 178 GQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAV 237

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  +MR  GV  D I + SIL      D++  G  IH +++K GLE    +  +L 
Sbjct: 238 EALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLT 297

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
             YAK G++  A   FDQM   +V+ WN++I+ Y ++     A   F  M    I+PD +
Sbjct: 298 AFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSV 357

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S     AQ+     ++ +  ++ +   +  D+ +  +++DMYAK G +  A  VF+ 
Sbjct: 358 TVRSAVLASAQVGSLELAQWMDDYVSKSN-YGSDIFVNTSLIDMYAKCGSVEFARRVFDR 416

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
              KDV+ W+ +I GY  +G   EAI ++ +M++   + PN  T++ +L A +H G +++
Sbjct: 417 NSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAG-VFPNDVTFIGLLTACNHSGLVKE 475

Query: 467 GIKIHARVIKNCLC-FDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAI 520
           G ++      +C+  F++       +C+VD+ G+ G + +A +   ++P    V  W A+
Sbjct: 476 GWELF-----HCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGAL 530

Query: 521 ISCHGIH 527
           +S   I+
Sbjct: 531 LSACKIY 537


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/747 (36%), Positives = 430/747 (57%), Gaps = 10/747 (1%)

Query: 78   TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
            +V  +  L++ + N   +  +   F+++  R+  +WNS+I+     GR  E++  F+   
Sbjct: 385  SVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMR 444

Query: 138  LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
             T   + D+ T   +L AC   ++L  G+ +H  + K G E +V V  SLL MY + G +
Sbjct: 445  RTHP-KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSS 503

Query: 195  NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
              A  +F  MP RD  SWN+M++ + + G    A+ +L EM     +M+ +T  + L  C
Sbjct: 504  EDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC 563

Query: 255  ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
                N+    ++H +++   +  NL + N L+ MY KFG+M  A +V   M ERDVV+WN
Sbjct: 564  Y---NLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWN 620

Query: 315  SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC-RNSRSVHGFIMR 373
            ++I  +    DP      F  M++ G+  + +T+V+L       +   ++   +H  I+ 
Sbjct: 621  ALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVV 680

Query: 374  RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
             G F  D  + ++++ MYA+ G +N++  +F+ L  K+  +WN + +  A  G   EA++
Sbjct: 681  AG-FELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALK 739

Query: 434  VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
                M   + ++ +Q ++   L    ++  L +G ++H+ +IK     D +V    +DMY
Sbjct: 740  FIARMRN-DGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMY 798

Query: 494  GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            GKCG IDD   +       S   WN +IS    HG   +A   F +MLD G++PDH+TFV
Sbjct: 799  GKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFV 858

Query: 554  SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            SLL+ACSH GLV EG  YF  M  EFG+   ++H  C++DL GR+G L  A  FI  MPV
Sbjct: 859  SLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPV 918

Query: 614  RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
             P+  +W +LL AC++HGN+ELG  A+DRLFE++S +   YVL SN+ A+  +W  V+ V
Sbjct: 919  PPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENV 978

Query: 674  RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
            R     + LKK P  S I++ NKV  F  G++ HP+  +IY +L  L    +  G++PD 
Sbjct: 979  RKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDT 1038

Query: 734  SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
            S+ LQD +E++KEH L +HSER+A+AFG+I+S   SP++IFKNLRVCGDCH+  K +S+I
Sbjct: 1039 SYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKI 1098

Query: 794  TEREIIVRDSNRFHHFKDGICSCGDYW 820
              R+I+VRDS RFHHF  G CSC DYW
Sbjct: 1099 VGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 180/623 (28%), Positives = 313/623 (50%), Gaps = 24/623 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHAL V     +  F +  LVN Y+  G + +++H FD +  RN  +WN+MIS +VR 
Sbjct: 167 KALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRV 226

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDG-KKIHCSVLKLGFEWDVF 179
           G   +A+  F+     +G+ P  Y    ++ AC     + +G ++IH  V+K G   +VF
Sbjct: 227 GWYHKAMQ-FFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SLLH Y   G  + A KLF+++   +  SW +++  Y  +G+  E L+I   +R  G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHA 298
           +     T+A+++  C    +   G  I   ++K GL+  ++ V+N+LI+M+  +  +  A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF+ M ERD +SWNSII A   +     + G F  M++   + D +T+ +L       
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
              +  R +HG I + G    +V + N+++ MYA+ G    A  VF  +P +D+ISWN++
Sbjct: 466 QHLKWGRGLHGLITKSG-LESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 419 ITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +  + ++G  S AI +  +M++    +N     YV+   A S    L +   +HA VI  
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMN-----YVTFTTALSACYNLEKLKIVHAFVIHF 579

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            +  ++ +   LV MYGK G +D+A  +   +P    V WNA+I  H      +  +  F
Sbjct: 580 AVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAF 639

Query: 538 RQMLDEGVRPDHITFVSLLTAC-SHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLF 595
             M  EG+  ++IT V+LL  C S   L+  G   + H++   F +  +++    ++ ++
Sbjct: 640 NLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQ--SSLITMY 697

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVASDRLFEVDSENVGY 653
            + G L  + ++I ++    ++S W A+  A   +G  E  L  +A  R   VD +   +
Sbjct: 698 AQCGDLNTS-SYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSF 756

Query: 654 YVLMSNIYANVGKWEGVDEVRSL 676
            V +    A +G    +DE + L
Sbjct: 757 SVAL----ATIGNLTVLDEGQQL 775



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 223/466 (47%), Gaps = 7/466 (1%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK +H   +K   + + F   +L++MY +FG    A+ +FD M  R+  SWN MISG+ +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLF 280
            G   +A+     M   GV+     +AS++  C RS  +  G   IH Y+VK GL  N+F
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +L++ Y   G +  A ++F+++ E ++VSW S++  Y  +         +  ++  G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           +     T+ ++        D      + G +++ G     V + N+++ M+     +  A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +  +D ISWN++IT  A NG   E++  F  M   +    +  T  ++LPA   
Sbjct: 406 SRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHP-KTDYITISALLPACGS 464

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
              L+ G  +H  + K+ L  +V V   L+ MY + G  +DA  +F+ +P    + WN++
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           ++ H   G+   A+    +ML      +++TF + L+AC +     E  +  H     F 
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN----LEKLKIVHAFVIHFA 580

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +  +L     +V ++G+ G +  A    + MP R D   W AL+G 
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPER-DVVTWNALIGG 625



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 16/287 (5%)

Query: 45  SREIDFDDLFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           S  I   +L  +C      L H   +HA +VV+G     +  + L+  YA  GDL+ S +
Sbjct: 649 SNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSY 708

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD ++ +N  TWN++ S     G   EA+  F       G+  D ++F   L    NL 
Sbjct: 709 IFDVLANKNSSTWNAIFSANAHYGPGEEALK-FIARMRNDGVDLDQFSFSVALATIGNLT 767

Query: 161 ---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
              +G+++H  ++KLGFE D +V  + + MY + G  +   ++     +R   SWN +IS
Sbjct: 768 VLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILIS 827

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
              + G   +A +   EM   G+  D +T  S+L  C+    +  GL   +Y      EF
Sbjct: 828 ALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGL---VYFSSMTSEF 884

Query: 278 NLFVSNN----LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            +  +      +I++  + G +  A    D+M +  +   W S++AA
Sbjct: 885 GVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAA 931



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 7/209 (3%)

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N L T   +N   S  I  F      N  NP    ++     +S +     G  +HA  +
Sbjct: 121 NQLETCVKENEFLSYGIHTFIR----NHSNPQVSRFLQ--KGFSEISEGNVGKALHALCV 174

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           K+ +  + F    LV+MY K G I  A  +F ++   +   WN +IS     G   KA+ 
Sbjct: 175 KDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQ 234

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
           FF  M + GV P      S++TAC  SG ++EG R  H    + G+  ++     ++  +
Sbjct: 235 FFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFY 294

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           G  G +  A+   + +   P+   W +L+
Sbjct: 295 GTHGSVSEANKLFEEIE-EPNIVSWTSLM 322


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 290/764 (37%), Positives = 445/764 (58%), Gaps = 15/764 (1%)

Query: 64  KRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           K+LHAL V  G     +   T LV+ Y N   +   R  F+ +  RNV TW S+++ Y++
Sbjct: 75  KQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQ 134

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKIHCSVLKLGFEWDVF 179
            G L + +  F++     G+ P+ +TF  VL   A + +VD G+ +H   +K G    VF
Sbjct: 135 AGVLLDVMSLFFRMR-AEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVF 193

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SL++MY + GL   AR +F  M  RD  SWN +++G   +G  +EAL +  + R   
Sbjct: 194 VCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSI 253

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             +   T ++++ +CA   ++     +H  ++KHG      V   L++ Y K G +  AL
Sbjct: 254 TMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKAL 313

Query: 300 RVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            VF  M   ++VVSW ++I    Q+ D   A   F+ M++ G+ P+ LT     S +  +
Sbjct: 314 DVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTY----STILTV 369

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           ++      +H  +++  +     + G A++  Y+KL     A ++F+ +  KDV+SW+ +
Sbjct: 370 SEASFPPQIHAQVIKTNYECTPTV-GTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAM 428

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHARVIKN 477
           +T YAQ G  + A   F  M   + + PN+ T  S + A  S    +  G + HA  IK+
Sbjct: 429 LTCYAQAGDCNGATNAFIKMT-MHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKH 487

Query: 478 CLCFDVF-VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             C D   V++ LV MY + G I++A  +F +      + WN+++S +  HG   KAL+ 
Sbjct: 488 -RCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDV 546

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           FRQM  EG+  D +TF+S++  C+H+GLV EGQ+YF +M  ++GI P + HY CMVDL+ 
Sbjct: 547 FRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYS 606

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG L    + I+ MP     +IW ALLGACR+H N+ELG +A+++L  ++  +   YVL
Sbjct: 607 RAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVL 666

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIY+  GKW+  DEVR L   + ++K  G S I++ NKV  F   +++HP  E+IY +
Sbjct: 667 LSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAK 726

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           LR +TAK+K  GY PD SFV  DV ED+KE +L  HSERLA+AFG+I++PP +P+ IFKN
Sbjct: 727 LRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKN 786

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRV GD H   K +S+I +REI++RD  RFHHFK G+CSCGD+W
Sbjct: 787 LRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 141/301 (46%), Gaps = 8/301 (2%)

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           L+ +  I   + D    + +H   +R G    D+ +G ++VDMY     +     VFEG+
Sbjct: 58  LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM 117

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             ++V++W +L+TGY Q G+  + + +F  M     + PN  T+ S+L   +  G +  G
Sbjct: 118 LKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRA-EGVWPNPFTFSSVLSMVASQGMVDLG 176

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +HA+ IK   C  VFV   L++MY KCG +++A  +F ++     V WN +++   ++
Sbjct: 177 QHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLN 236

Query: 528 GQGDKALNFF---RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           G+  +AL  F   R  +       + T ++L     H GL     R  H    + G   +
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLA----RQLHSSVLKHGFHSY 292

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
                 ++D + +AG L  A +    M    +   W A++  C  +G++ L A    R+ 
Sbjct: 293 GNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMR 352

Query: 645 E 645
           E
Sbjct: 353 E 353


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/699 (38%), Positives = 430/699 (61%), Gaps = 9/699 (1%)

Query: 126 LSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
           +SEA      F  T SG+  D + +  ++ +  +    ++IH  +L LG ++  F+   L
Sbjct: 1   MSEASCLASPFLYTNSGIHSDSF-YASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKL 59

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           +H    +G    AR++FDD+P      WNA+I GY ++ +  +AL +  +M+L  VS D 
Sbjct: 60  IHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDS 119

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD- 303
            T   +L  C    ++  G  +H  + + G E ++FV N LI +YAK   +  A  VF+ 
Sbjct: 120 FTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEG 179

Query: 304 -QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
             + ER +VSW +I++AY Q+ +P+ A   F+ M++  ++PD + LVS+ +    L D  
Sbjct: 180 LPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLE 239

Query: 363 NSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
             RS+H  +M+ G   E D++I  ++  MYAK G + +A  +F+ +   ++I WN +I+G
Sbjct: 240 QGRSIHASVMKMGLETEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           YA+NG A +AI++F  M    ++ P+  +  S + A + VG+L Q   +   V ++    
Sbjct: 298 YAKNGFAKDAIDLFHEMIN-KDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRD 356

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DVF+++ L+DM+ KCG ++ A S+F +      V W+A+I  +G+HGQ  +A++ +R M 
Sbjct: 357 DVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME 416

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
            +GV P+ +TF+ LL AC+HSG+V EG  +F+ M +   I P  +HY C++DL GRAGHL
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADH-KINPQQQHYACIIDLLGRAGHL 475

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A+  I+ MPV+P  ++WGALL AC+ H ++ELG  A+ +LF +D  N G+YV +SN+Y
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLY 535

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A    W+ V EVR   +++GL K  G S +EV  +++ F  G+++HP+YE+I  ++  + 
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIE 595

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
           +++K  G+V +K   L D+ ++E E  L SHSER+ IA+G+IS+P  + ++I KNLR C 
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACV 655

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +CH  TK IS++  REI+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 656 NCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 258/479 (53%), Gaps = 9/479 (1%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  L  S T    ++++HA L+V G   + F  TKL++  ++ GD++F+R  FD +    
Sbjct: 24  YASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQ 83

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           V+ WN++I  Y R     +A+  + +  L   + PD +TFP +LKAC  L     G+ +H
Sbjct: 84  VFPWNAIIRGYSRNNHFQDALLMYSKMQLAR-VSPDSFTFPHLLKACGGLSHLQMGRFVH 142

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGN 224
             V +LGFE DVFV   L+ +Y +      AR +F+ +P+  R   SW A++S Y Q+G 
Sbjct: 143 AQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
            VEAL+I  +MR   V  D + + S+L       ++  G  IH  ++K GLE    +  +
Sbjct: 203 PVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLIS 262

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L  MYAK G +  A  +FD+M   +++ WN++I+ Y ++     A   F  M    ++PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPD 322

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +++ S  S  AQ+     +R +  ++ R   + +DV I +A++DM+AK G +  A +VF
Sbjct: 323 TISITSAISACAQVGSLEQARWMDEYVSRSD-YRDDVFISSALIDMFAKCGSVECARSVF 381

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           +    +DV+ W+ +I GY  +G A EAI +++ ME  + ++PN  T++ +L A +H G +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMER-DGVHPNDVTFLGLLIACNHSGMV 440

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
           R+G     R+  + +        C++D+ G+ G +D A  +   +P    V  W A++S
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/820 (36%), Positives = 453/820 (55%), Gaps = 28/820 (3%)

Query: 24  RPLFSAAANSLQISPDCLENESREIDFDD-----LFQSCTK---LHHVKRLHALLVVSGK 75
           R L +A+ +   I+   L+ E + +  ++     L Q C +   L   +++H+L V    
Sbjct: 15  RCLHTASLDRSDIASAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNL 74

Query: 76  IK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           +   +     +V+ YA+      ++  FD +  RN+Y+W  +++ +   G+  E +    
Sbjct: 75  LPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALE 134

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +     G+RPD  TF   L +C    +L DG +IH  V+    E D  V+ +LL+MY + 
Sbjct: 135 RMR-QDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKC 193

Query: 192 GLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
           G  + A+++F  M   R+  SW+ M   +   GN  EAL     M L G+      + +I
Sbjct: 194 GSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTI 253

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--R 308
           L  C+    +  G LIH  I   G E  L V+N ++ MY + G +  A +VFD M E  R
Sbjct: 254 LSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALR 313

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           DVVSWN +++AY  ++    A   +  MQ   ++ D +T VSL S  +   D    R +H
Sbjct: 314 DVVSWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLH 370

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             I+      ++VI+GNA+V MYAK G    A AVF+ +  + +ISW T+I+ Y +  L 
Sbjct: 371 KQIVN-DELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLV 429

Query: 429 SEAIEVFQMMEECNE------INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           +EA  +FQ M E  +      + P+   +V+IL A + V AL QG  +  +     L  D
Sbjct: 430 AEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSD 489

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQML 541
             V T +V++YGKCG I++   +F  V     V  WNA+I+ +   GQ  +AL  F +M 
Sbjct: 490 KAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME 549

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF-GIKPHLKHYGCMVDLFGRAGH 600
            EGVRPD  +FVS+L ACSH+GL  +G+ YF  M  E+  +   ++H+GC+ DL GR G 
Sbjct: 550 MEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGR 609

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A  F++ +PV+PDA  W +LL ACR H +++     +++L  ++      YV +SNI
Sbjct: 610 LKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNI 669

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA + KW  V +VR    ++G+KK  G S+IE+   +  F TG+  HP+  +I +EL  L
Sbjct: 670 YAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKL 729

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
            ++MK  GYVPD   VL  V+E EKE +L SHSERLAIA G+IS+P  +P+++ KNLRVC
Sbjct: 730 HSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVC 789

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH  TK IS+I  R+I+VRD  RFH FKDG CSC DYW
Sbjct: 790 SDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 275/777 (35%), Positives = 450/777 (57%), Gaps = 16/777 (2%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           + D  + C  L  V+++H    +SG     VF   ++V  Y   G ++ +R  FD I+ +
Sbjct: 30  YRDALRQCQDLESVRQIHDR--ISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARK 87

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKI 165
           N Y+W SM++ Y + G    A+D + +  L    +P+   +  VL AC +   L +GK I
Sbjct: 88  NDYSWGSMLTAYAQNGHYRAALDLYKRMDL----QPNPVVYTTVLGACASIEALEEGKAI 143

Query: 166 HCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS-GSWNAMISGYCQSG 223
           H  +    G + DV +  SLL MY + G    A++LF+ M  R S  SWNAMI+ Y QSG
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSG 203

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  EA+ + ++M +E       T  S+L  C+    +  G  IH  I   G E +L + N
Sbjct: 204 HFEEAIRLYEDMDVEPSVR---TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN 260

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+ MYA+   +  A ++F ++  RDVVSW+++IAA+ +++    A  F++ MQ  G++P
Sbjct: 261 ALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRP 320

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           +  T  S+    A + D R  R+VH  I+  G+ +  ++ G A+VD+Y   G ++ A ++
Sbjct: 321 NYYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT-LVNGTALVDLYTSYGSLDEARSL 379

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +  +D   W  LI GY++ G  +  +E+++ M+   ++   +  Y  ++ A + +GA
Sbjct: 380 FDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGA 439

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
                + H+ +  + +  D  +AT LV+MY + G ++ A  +F ++    ++ W  +I+ 
Sbjct: 440 FADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAG 499

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  HG+   AL  +++M  EG  P  +TF+ +L ACSH+GL  +G++ F  +Q ++ + P
Sbjct: 500 YAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHP 559

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
           ++ HY C++DL  RAG L  A   I  MPV P+   W +LLGA RIH +++    A+ ++
Sbjct: 560 NIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQI 619

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            ++D  +   YVL+SN++A  G   G+  VR+    RG+KK  G S IEV +++  F  G
Sbjct: 620 TKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVG 679

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           + +HP++++I+ EL+ L+ K+K  GYVP+   VL DV E EKE +L  HSE+LAIAFG+I
Sbjct: 680 DNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLI 739

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ P + ++IF  LR+C DCH+  KFIS I  REIIVRDS+RFH F+DG CSCGDYW
Sbjct: 740 ATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 402/666 (60%), Gaps = 5/666 (0%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           + L  GK++H  ++  G+    F+   L++MY + G  + A KLFD MP R+  SW AMI
Sbjct: 19  KRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           SG  Q+    EA+     MR+ G        +S +  CA   +I  G  +H   +K G+ 
Sbjct: 79  SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG 138

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             LFV +NL +MY+K G M  A +VF++M  +D VSW ++I  Y +  +   A   F  M
Sbjct: 139 SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
               +  D   L S       L  C+  RSVH  +++ G F  D+ +GNA+ DMY+K G 
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAGD 257

Query: 397 INSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           + SA  VF G+    ++V+S+  LI GY +     + + VF  +     I PN+ T+ S+
Sbjct: 258 MESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR-QGIEPNEFTFSSL 315

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           + A ++  AL QG ++HA+V+K     D FV++ LVDMYGKCG ++ A+  F ++   + 
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE 375

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           + WN+++S  G HG G  A+  F +M+D GV+P+ ITF+SLLT CSH+GLV EG  YF+ 
Sbjct: 376 IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYS 435

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M + +G+ P  +HY C++DL GRAG L  A  FI  MP  P+A  W + LGACRIHG+ E
Sbjct: 436 MDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G +A+++L +++ +N G  VL+SNIYAN  +WE V  VR   RD  +KK PG+S ++V 
Sbjct: 496 MGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVG 555

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
            K  +F   + +HP+   IY++L  L  ++K+ GYVP    V  D+++  KE +L  HSE
Sbjct: 556 YKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSE 615

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           R+A+AF +IS P   PI + KNLRVC DCH+  KFIS++T R+IIVRD++RFHHF DG C
Sbjct: 616 RIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSC 675

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 676 SCGDYW 681



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 245/484 (50%), Gaps = 15/484 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           +    +L   K+LHALL+ +G     F +  LVN Y+  G+L  +   FD +  RN+ +W
Sbjct: 15  YAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSW 74

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
            +MIS   +  + SEA+  F    +  G  P  + F   ++AC +L     GK++HC  L
Sbjct: 75  TAMISGLSQNSKFSEAIRTFCGMRIC-GEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G   ++FV ++L  MY + G    A K+F++MP +D  SW AMI GY + G   EAL 
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
              +M  E V++D   + S L  C        G  +H  +VK G E ++FV N L +MY+
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253

Query: 291 KFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           K G M  A  VF    E R+VVS+  +I  Y ++         F  +++ GI+P+  T  
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL    A          +H  +M+   F ED  + + +VDMY K G++  A   F+ +  
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
              I+WN+L++ + Q+GL  +AI++F+ M +   + PN  T++S+L   SH G + +G+ 
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKIFERMVD-RGVKPNAITFISLLTGCSHAGLVEEGLD 431

Query: 470 IHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCH 524
               + K    + V       +C++D+ G+ GR+ +A     ++P   ++  W + +   
Sbjct: 432 YFYSMDKT---YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 488

Query: 525 GIHG 528
            IHG
Sbjct: 489 RIHG 492



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 7/391 (1%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D   +A ++   A++  +  G  +H  ++  G     F++N+L+NMY+K G + HAL++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M +R++VSW ++I+   Q++    A   F  M+  G  P      S     A L    
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             + +H   ++ G    ++ +G+ + DMY+K G +  AC VFE +P KD +SW  +I GY
Sbjct: 124 MGKQMHCLALKFG-IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           ++ G   EA+  F+ M +  E+  +Q    S L A   + A + G  +H+ V+K     D
Sbjct: 183 SKIGEFEEALLAFKKMID-EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 483 VFVATCLVDMYGKCGRIDDAMSLF-YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +FV   L DMY K G ++ A ++F       + V +  +I  +    Q +K L+ F ++ 
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            +G+ P+  TF SL+ AC++   + +G Q +  +M+  F   P +     +VD++G+ G 
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGL 359

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           L  A      +   P    W +L+     HG
Sbjct: 360 LEQAIQAFDEIG-DPTEIAWNSLVSVFGQHG 389


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/815 (36%), Positives = 464/815 (56%), Gaps = 58/815 (7%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           +Q        + LH   +  G +  +F S  L+N Y  +GDL  ++  FD +S RN+ TW
Sbjct: 109 YQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTW 168

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-----GKKIHCS 168
             +IS Y + G+  EA   F    + +G  P+ Y F   L+AC+         G +IH  
Sbjct: 169 ACLISGYTQNGKPDEACARFRDM-VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGL 227

Query: 169 VLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           + K  +  DV V   L+ MY      AN AR +FD + +R+S SWN++IS Y + G+AV 
Sbjct: 228 ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVS 287

Query: 228 ALDILDEMRLEGVSM-----DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFV 281
           A D+   M+ EG+       D  +  S+L    R      G  +H ++++ GL  N + +
Sbjct: 288 AYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRK-----GREVHAHVIRTGLNDNKVAI 342

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN---------------DP 326
            N L+NMYAK G +  A  VF+ M+E+D VSWNS+I+  +Q+                D 
Sbjct: 343 GNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQ 402

Query: 327 IT-----------------AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           ++                 A  +F  M + G     +T +++ S V+ L+    S  +H 
Sbjct: 403 VSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHA 462

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLA 428
            +++     +D  IGNA++  Y K G +N    +F  +   +D +SWN++I+GY  N L 
Sbjct: 463 LVLKY-CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 521

Query: 429 SEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
            +A++ V+ MM++   ++    T+ +IL A + V  L +G+++HA  I+ CL  DV V +
Sbjct: 522 HKAMDLVWFMMQKGQRLD--SFTFATILSACASVATLERGMEVHACGIRACLESDVVVGS 579

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            LVDMY KCGRID A   F  +P  +   WN++IS +  HG G+KAL  F +M+ +G  P
Sbjct: 580 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 639

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           DH+TFV +L+ACSH G V EG  +F  M E + + P ++H+ CMVDL GRAG L    +F
Sbjct: 640 DHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDF 699

Query: 608 IQNMPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
           I +MP++P+  IW  +LGA CR +G N ELG  A++ L E++ +N   YVL++N+YA+  
Sbjct: 700 INSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGE 759

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           KWE V + R+  ++  +KK  G S + + + V +F  G++ HP+ + IYD+LR L  KM+
Sbjct: 760 KWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMR 819

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             GY+P   + L D+E + KE +L+ HSE++A+AF +++     PI+I KNLRVCGDCH+
Sbjct: 820 DAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHS 878

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              +IS+I  R+I++RDSNRFHHF+DG CSCGDYW
Sbjct: 879 AFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%)

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+ S++  Y       +  ++H + IK     ++F++  L+++Y + G +  A  LF ++
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
              + V W  +IS +  +G+ D+A   FR M+  G  P+H  F S L AC  SG
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/757 (35%), Positives = 437/757 (57%), Gaps = 11/757 (1%)

Query: 70   LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
            +V SG    +     L++   ++G++ ++ + FD +S R+  +WNS+ + Y + G + E+
Sbjct: 276  VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 335

Query: 130  VDCFYQFTLTSGLRPDF-----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
               F  F+L      +       T   VL    +   G+ IH  V+K+GF+  V V  +L
Sbjct: 336  ---FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 392

Query: 185  LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            L MY   G +  A  +F  MP +D  SWN++++ +   G +++AL +L  M   G S++ 
Sbjct: 393  LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 452

Query: 245  ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
            +T  S L  C   D    G ++H  +V  GL +N  + N L++MY K G M  + RV  Q
Sbjct: 453  VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 512

Query: 305  MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC-RN 363
            M  RDVV+WN++I  Y +  DP  A   F TM+  G+  + +T+VS+ S      D    
Sbjct: 513  MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 572

Query: 364  SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
             + +H +I+  G F  D  + N+++ MYAK G ++S+  +F GL  +++I+WN ++   A
Sbjct: 573  GKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 631

Query: 424  QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
             +G   E +++   M     ++ +Q ++   L A + +  L +G ++H   +K     D 
Sbjct: 632  HHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 690

Query: 484  FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            F+     DMY KCG I + + +       S   WN +IS  G HG  ++    F +ML+ 
Sbjct: 691  FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 750

Query: 544  GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
            G++P H+TFVSLLTACSH GLV +G  Y+ M+  +FG++P ++H  C++DL GR+G L  
Sbjct: 751  GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 810

Query: 604  AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
            A  FI  MP++P+  +W +LL +C+IHGN++ G  A++ L +++ E+   YVL SN++A 
Sbjct: 811  AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 870

Query: 664  VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
             G+WE V+ VR     + +KK    S +++ +KV  F  G+RTHP+  +IY +L ++   
Sbjct: 871  TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 930

Query: 724  MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
            +K  GYV D S  LQD +E++KEH L +HSERLA+A+ ++S+P  S ++IFKNLR+C DC
Sbjct: 931  IKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDC 990

Query: 784  HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            H+  KF+S++  R I++RD  RFHHF+ G+CSC DYW
Sbjct: 991  HSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 181/613 (29%), Positives = 304/613 (49%), Gaps = 40/613 (6%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           FD +  S   +    R    L V G ++ +V  +  L+N Y   G +  +RH FD +  R
Sbjct: 77  FDQIGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVR 136

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKK 164
           N  +WN+M+S  VR G   E ++ F++     G++P  +    ++ AC        +G +
Sbjct: 137 NEVSWNTMMSGIVRVGLYLEGME-FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 195

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H  V K G   DV+V+ ++LH+Y  +GL + +RK+F++MP R+  SW +++ GY   G 
Sbjct: 196 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 255

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             E +DI  +  L                         G  I   +VK GLE  L V N+
Sbjct: 256 PEEVIDIYKDESL-------------------------GRQIIGQVVKSGLESKLAVENS 290

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI+M    G + +A  +FDQM ERD +SWNSI AAY Q+     +   F+ M++   + +
Sbjct: 291 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 350

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
             T+ +L S++  ++  +  R +HG +++ G F   V + N ++ MYA  G    A  VF
Sbjct: 351 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGAGRSVEANLVF 409

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +P KD+ISWN+L+  +  +G + +A+ +   M    + + N  T+ S L A       
Sbjct: 410 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDFF 468

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
            +G  +H  V+ + L ++  +   LV MYGK G + ++  +  Q+PR   V WNA+I  +
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 528

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH--MMQEEFGIK 582
                 DKAL  F+ M  EGV  ++IT VS+L+AC   G + E  +  H  ++   F   
Sbjct: 529 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 588

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVAS 640
            H+K+   ++ ++ + G L  + +    +  R +   W A+L A   HG+ E  L  V+ 
Sbjct: 589 EHVKN--SLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGEEVLKLVSK 645

Query: 641 DRLFEVDSENVGY 653
            R F V  +   +
Sbjct: 646 MRSFGVSLDQFSF 658



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 276/573 (48%), Gaps = 32/573 (5%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  +  SG +  V+ ST +++ Y   G +S SR  F+ +  RNV +W S++  Y   G
Sbjct: 195 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 254

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
              E +D +   +L                       G++I   V+K G E  + V  SL
Sbjct: 255 EPEEVIDIYKDESL-----------------------GRQIIGQVVKSGLESKLAVENSL 291

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           + M    G  + A  +FD M  RD+ SWN++ + Y Q+G+  E+  I   MR     ++ 
Sbjct: 292 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 351

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
            TV+++L V    D+   G  IH  +VK G +  + V N L+ MYA  G    A  VF Q
Sbjct: 352 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 411

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M  +D++SWNS++A++      + A G   +M  +G   + +T  S  +     +     
Sbjct: 412 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 471

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +HG ++  G F    IIGNA+V MY K+G ++ +  V   +P +DV++WN LI GYA+
Sbjct: 472 RILHGLVVVSGLFYNQ-IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 530

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG-ALRQGIKIHARVIKNCLCFDV 483
           +    +A+  FQ M     ++ N  T VS+L A    G  L +G  +HA ++      D 
Sbjct: 531 DEDPDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 589

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            V   L+ MY KCG +  +  LF  +   + + WNA+++ +  HG G++ L    +M   
Sbjct: 590 HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF 649

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           GV  D  +F   L+A +   ++ EGQ+  H +  + G +     +    D++ + G +G 
Sbjct: 650 GVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKCGEIG- 707

Query: 604 AHNFIQNMPVRPDASI--WGALLGACRIHGNME 634
               ++ +P   + S+  W  L+ A   HG  E
Sbjct: 708 --EVVKMLPPSVNRSLPSWNILISALGRHGYFE 738



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 6/265 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LHA +V +G          L+  YA  GDLS S+  F+ +  RN+ TWN+M++ 
Sbjct: 570 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 629

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
               G   E +    +   + G+  D ++F   L A   L    +G+++H   +KLGFE 
Sbjct: 630 NAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 688

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F+  +   MY + G      K+      R   SWN +IS   + G   E      EM 
Sbjct: 689 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 748

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMM 295
             G+    +T  S+L  C+    +  GL  +  I +  GLE  +     +I++  + G +
Sbjct: 749 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 808

Query: 296 RHALRVFDQM-MERDVVSWNSIIAA 319
             A     +M M+ + + W S++A+
Sbjct: 809 AEAETFISKMPMKPNDLVWRSLLAS 833



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 3/183 (1%)

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N  NP    +  I   +S +     G  +HA  +K  +   V     L++MY K GR+  
Sbjct: 68  NHWNPEISCFDQI--GFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKP 125

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  +P  + V WN ++S     G   + + FFR+M D G++P      SL+TAC  
Sbjct: 126 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 185

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           SG +       H    + G+   +     ++ L+G  G +  +    + MP R   S W 
Sbjct: 186 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS-WT 244

Query: 622 ALL 624
           +L+
Sbjct: 245 SLM 247


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 269/763 (35%), Positives = 440/763 (57%), Gaps = 11/763 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++   +V SG    +     L++   ++G++ ++ + FD +S R+  +WNS+ + Y + 
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 124 GRLSEAVDCFYQFTLTSGLRPDF-----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDV 178
           G + E+   F  F+L      +       T   VL    +   G+ IH  V+K+GF+  V
Sbjct: 240 GHIEES---FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V  +LL MY   G +  A  +F  MP +D  SWN++++ +   G +++AL +L  M   
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G S++ +T  S L  C   D    G ++H  +V  GL +N  + N L++MY K G M  +
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RV  QM  RDVV+WN++I  Y +  DP  A   F TM+  G+  + +T+VS+ S     
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476

Query: 359 NDC-RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            D     + +H +I+  G F  D  + N+++ MYAK G ++S+  +F GL  +++I+WN 
Sbjct: 477 GDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 535

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           ++   A +G   E +++   M     ++ +Q ++   L A + +  L +G ++H   +K 
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 594

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               D F+     DMY KCG I + + +       S   WN +IS  G HG  ++    F
Sbjct: 595 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 654

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +ML+ G++P H+TFVSLLTACSH GLV +G  Y+ M+  +FG++P ++H  C++DL GR
Sbjct: 655 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 714

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           +G L  A  FI  MP++P+  +W +LL +C+IHGN++ G  A++ L +++ E+   YVL 
Sbjct: 715 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN++A  G+WE V+ VR     + +KK    S +++ +KV  F  G+RTHP+  +IY +L
Sbjct: 775 SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
            ++   +K  GYV D S  LQD +E++KEH L +HSERLA+A+ ++S+P  S ++IFKNL
Sbjct: 835 EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 894

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           R+C DCH+  KF+S++  R I++RD  RFHHF+ G+CSC DYW
Sbjct: 895 RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/567 (31%), Positives = 296/567 (52%), Gaps = 14/567 (2%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y   G +  +RH FD +  RN  +WN+M+S  VR G   E ++ F++     G++P  +
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGME-FFRKMCDLGIKPSSF 59

Query: 148 TFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
               ++ AC        +G ++H  V K G   DV+V+ ++LH+Y  +GL + +RK+F++
Sbjct: 60  VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           MP R+  SW +++ GY   G   E +DI   MR EGV  +  +++ ++  C    +   G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             I   +VK GLE  L V N+LI+M    G + +A  +FDQM ERD +SWNSI AAY Q+
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                +   F+ M++   + +  T+ +L S++  ++  +  R +HG +++ G F   V +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG-FDSVVCV 298

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            N ++ MYA  G    A  VF+ +P KD+ISWN+L+  +  +G + +A+ +   M    +
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
            + N  T+ S L A        +G  +H  V+ + L ++  +   LV MYGK G + ++ 
Sbjct: 359 -SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +  Q+PR   V WNA+I  +      DKAL  F+ M  EGV  ++IT VS+L+AC   G
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG 477

Query: 564 LVSEGQRYFH--MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            + E  +  H  ++   F    H+K+   ++ ++ + G L  + +    +  R +   W 
Sbjct: 478 DLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNR-NIITWN 534

Query: 622 ALLGACRIHGNME--LGAVASDRLFEV 646
           A+L A   HG+ E  L  V+  R F V
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKMRSFGV 561



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/576 (29%), Positives = 285/576 (49%), Gaps = 13/576 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  +  SG +  V+ ST +++ Y   G +S SR  F+ +  RNV +W S++  Y   G
Sbjct: 80  QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
              E +D  Y+     G+  +  +   V+ +C  L D   G++I   V+K G E  + V 
Sbjct: 140 EPEEVID-IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ M    G  + A  +FD M  RD+ SWN++ + Y Q+G+  E+  I   MR     
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           ++  TV+++L V    D+   G  IH  +VK G +  + V N L+ MYA  G    A  V
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F QM  +D++SWNS++A++      + A G   +M  +G   + +T  S  +     +  
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              R +HG ++  G F    IIGNA+V MY K+G ++ +  V   +P +DV++WN LI G
Sbjct: 379 EKGRILHGLVVVSGLFYNQ-IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG-ALRQGIKIHARVIKNCLC 480
           YA++    +A+  FQ M     ++ N  T VS+L A    G  L +G  +HA ++     
Sbjct: 438 YAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 496

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  V   L+ MY KCG +  +  LF  +   + + WNA+++ +  HG G++ L    +M
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              GV  D  +F   L+A +   ++ EGQ+  H +  + G +     +    D++ + G 
Sbjct: 557 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKCGE 615

Query: 601 LGMAHNFIQNMPVRPDASI--WGALLGACRIHGNME 634
           +G     ++ +P   + S+  W  L+ A   HG  E
Sbjct: 616 IG---EVVKMLPPSVNRSLPSWNILISALGRHGYFE 648



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 6/265 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LHA +V +G          L+  YA  GDLS S+  F+ +  RN+ TWN+M++ 
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
               G   E +    +   + G+  D ++F   L A   L    +G+++H   +KLGFE 
Sbjct: 540 NAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F+  +   MY + G      K+      R   SWN +IS   + G   E      EM 
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMM 295
             G+    +T  S+L  C+    +  GL  +  I +  GLE  +     +I++  + G +
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718

Query: 296 RHALRVFDQM-MERDVVSWNSIIAA 319
             A     +M M+ + + W S++A+
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLAS 743


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/720 (38%), Positives = 424/720 (58%), Gaps = 15/720 (2%)

Query: 109  NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKI 165
            +V  WN  +S +++ G   EAVDCF    + S +  D  TF  +L   A  N ++ GK+I
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDM-INSRVACDGLTFVVMLSVVAGLNCLELGKQI 928

Query: 166  HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
            H  V++ G +  V V   L++MY + G  + AR +F  M   D  SWN MISG   SG  
Sbjct: 929  HGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988

Query: 226  VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG-----LLIHLYIVKHGLEFNLF 280
              ++ +  ++   G+  D  TVAS+L  C+     L G       IH   +K G+  + F
Sbjct: 989  ECSVGMFVDLLRGGLLPDQFTVASVLRACSS----LGGGCHLATQIHACAMKAGVVLDSF 1044

Query: 281  VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            VS  LI++Y+K G M  A  +F      D+ SWN+++  Y  S D   A   +  MQ++G
Sbjct: 1045 VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104

Query: 341  IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             + + +TL +       L   +  + +   +++RG F  D+ + + V+DMY K G + SA
Sbjct: 1105 ERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRG-FNLDLFVISGVLDMYLKCGEMESA 1163

Query: 401  CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
              +F  +P  D ++W T+I+G  +NG    A+  +  M   +++ P++ T+ +++ A S 
Sbjct: 1164 RRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMR-LSKVQPDEYTFATLVKACSL 1222

Query: 461  VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            + AL QG +IHA  +K    FD FV T LVDMY KCG I+DA  LF +   S    WNA+
Sbjct: 1223 LTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAM 1282

Query: 521  ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
            I     HG  ++AL FF +M   GV PD +TF+ +L+ACSHSGLVSE    F+ MQ+ +G
Sbjct: 1283 IVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYG 1342

Query: 581  IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
            I+P ++HY C+VD   RAG +  A   I +MP    AS++  LL ACR+  + E G   +
Sbjct: 1343 IEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVA 1402

Query: 641  DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
            ++L  ++  +   YVL+SN+YA   +WE V   R++ R   +KK PG+S +++ NKV +F
Sbjct: 1403 EKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLF 1462

Query: 701  YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
              G+R+H + + IY+++  +  +++  GY+PD  F L DVEE++KE  L  HSE+LAIA+
Sbjct: 1463 VAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAY 1522

Query: 761  GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            G++ +PP + +++ KNLRVCGDCHN  K+IS++ ERE+++RD+NRFHHF+ G+CSCGDYW
Sbjct: 1523 GLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 167/583 (28%), Positives = 274/583 (46%), Gaps = 48/583 (8%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYV 121
            KR HA ++ SG     F +  L+  Y+  G LS +R  FD    + R++ TWN+++S + 
Sbjct: 646  KRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHA 705

Query: 122  RCGRLSEAVDCFYQFTLTSGLRPDF-----YTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
                  +A D F+ F L   LR  F     +T  PV K C    +    + +H   +K+G
Sbjct: 706  -----DKARDGFHLFRL---LRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIG 757

Query: 174  FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
             +WDVFVA +L+++Y +FG    AR LFD M +RD   WN M+  Y  +G   EAL +  
Sbjct: 758  LQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFS 817

Query: 234  EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            E    G+  D +T+ ++  V     N+L   L  L    +G +  ++             
Sbjct: 818  EFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLK--AYGTKLFMYDD----------- 864

Query: 294  MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
                           DV++WN  ++ + Q  +   A   F  M  + +  D LT V + S
Sbjct: 865  ----------DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLS 914

Query: 354  IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
            +VA LN     + +HG ++R G   + V +GN +++MY K G ++ A  VF  +   D++
Sbjct: 915  VVAGLNCLELGKQIHGIVVRSG-LDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLV 973

Query: 414  SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV-GALRQGIKIHA 472
            SWNT+I+G A +GL   ++ +F  +     + P+Q T  S+L A S + G      +IHA
Sbjct: 974  SWNTMISGCALSGLEECSVGMFVDLLRGGLL-PDQFTVASVLRACSSLGGGCHLATQIHA 1032

Query: 473  RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
              +K  +  D FV+T L+D+Y K G++++A  LF          WNA++  + + G   K
Sbjct: 1033 CAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPK 1092

Query: 533  ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ-RYFHMMQEEFGIKPHLKHYGCM 591
            AL  +  M + G R + IT  +   A    GLV   Q +    +  + G    L     +
Sbjct: 1093 ALRLYILMQESGERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDLFVISGV 1150

Query: 592  VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            +D++ + G +  A      +P  PD   W  ++  C  +G  E
Sbjct: 1151 LDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGCVENGQEE 1192



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 172/580 (29%), Positives = 273/580 (47%), Gaps = 40/580 (6%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
             + LH   V  G    VF +  LVN YA  G +  +R  FD +  R+V  WN M+  YV 
Sbjct: 746  AESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVD 805

Query: 123  CGRLSEAVDCFYQFTLTSGLRPD---FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVF 179
             G   EA+  F +F  T GLRPD     T   V+K+ +N++              EW + 
Sbjct: 806  TGLEYEALLLFSEFNRT-GLRPDDVTLCTLARVVKSKQNVL--------------EWQLK 850

Query: 180  ---VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
                  + L MY      +            D  +WN  +S + Q G   EA+D   +M 
Sbjct: 851  QLKAYGTKLFMYDDDDDGS------------DVIAWNKTLSWFLQRGETWEAVDCFVDMI 898

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
               V+ D +T   +L V A  + +  G  IH  +V+ GL+  + V N LINMY K G + 
Sbjct: 899  NSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVS 958

Query: 297  HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
             A  VF QM E D+VSWN++I+    S     + G F  + + G+ PD  T+ S+    +
Sbjct: 959  RARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACS 1018

Query: 357  QL-NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
             L   C  +  +H   M+ G  + D  +   ++D+Y+K G +  A  +F      D+ SW
Sbjct: 1019 SLGGGCHLATQIHACAMKAGVVL-DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASW 1077

Query: 416  NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            N ++ GY  +G   +A+ ++ +M+E  E   NQ T  +   A   +  L+QG +I A V+
Sbjct: 1078 NAMMHGYIVSGDFPKALRLYILMQESGE-RANQITLANAAKAAGGLVGLKQGKQIQAVVV 1136

Query: 476  KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
            K     D+FV + ++DMY KCG ++ A  +F ++P    V W  +IS    +GQ + AL 
Sbjct: 1137 KRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALF 1196

Query: 536  FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDL 594
             +  M    V+PD  TF +L+ ACS    + +G Q + + ++      P +     +VD+
Sbjct: 1197 TYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDM 1254

Query: 595  FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            + + G++  A    +       AS W A++     HGN E
Sbjct: 1255 YAKCGNIEDARGLFKRTNTSRIAS-WNAMIVGLAQHGNAE 1293



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 227/459 (49%), Gaps = 12/459 (2%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            K++H ++V SG  + V     L+N Y   G +S +R  F  ++  ++ +WN+MIS     
Sbjct: 926  KQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALS 985

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVF 179
            G    +V  F    L  GL PD +T   VL+AC +L  G     +IH   +K G   D F
Sbjct: 986  GLEECSVGMFVDL-LRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF 1044

Query: 180  VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
            V+ +L+ +Y + G    A  LF +    D  SWNAM+ GY  SG+  +AL +   M+  G
Sbjct: 1045 VSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104

Query: 240  VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
               + IT+A+          +  G  I   +VK G   +LFV + +++MY K G M  A 
Sbjct: 1105 ERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESAR 1164

Query: 300  RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT--MQQAGIQPDLLTLVSLTSIVAQ 357
            R+F+++   D V+W ++I+   ++      H  FT   M+ + +QPD  T  +L    + 
Sbjct: 1165 RIFNEIPSPDDVAWTTMISGCVENGQ--EEHALFTYHHMRLSKVQPDEYTFATLVKACSL 1222

Query: 358  LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            L      R +H   ++      D  +  ++VDMYAK G I  A  +F+      + SWN 
Sbjct: 1223 LTALEQGRQIHANTVKLNCAF-DPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNA 1281

Query: 418  LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK- 476
            +I G AQ+G A EA++ F+ M +   + P++ T++ +L A SH G + +  +    + K 
Sbjct: 1282 MIVGLAQHGNAEEALQFFEEM-KSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKI 1340

Query: 477  NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
              +  ++   +CLVD   + GRI +A  +   +P  +S 
Sbjct: 1341 YGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASA 1379



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 229/491 (46%), Gaps = 30/491 (6%)

Query: 144  PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
            P +++      A  +L  GK+ H  +L  G   D F+  +L+ MY + G  + ARKLFD 
Sbjct: 627  PQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDT 686

Query: 204  MP--VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
             P   RD  +WNA++S +     A +   +   +R   VS    T+A +  +C  S +  
Sbjct: 687  TPDTSRDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPS 744

Query: 262  SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            +   +H Y VK GL++++FV+  L+N+YAKFG +R A  +FD M  RDVV WN ++ AY 
Sbjct: 745  AAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYV 804

Query: 322  QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
             +     A   F+   + G++PD +TL +L  +V    +               W ++ +
Sbjct: 805  DTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE------------WQLKQL 852

Query: 382  IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
                  + MY      +            DVI+WN  ++ + Q G   EA++ F  M   
Sbjct: 853  KAYGTKLFMYDDDDDGS------------DVIAWNKTLSWFLQRGETWEAVDCFVDMIN- 899

Query: 442  NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            + +  +  T+V +L   + +  L  G +IH  V+++ L   V V  CL++MY K G +  
Sbjct: 900  SRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSR 959

Query: 502  AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
            A ++F+Q+     V WN +IS   + G  + ++  F  +L  G+ PD  T  S+L ACS 
Sbjct: 960  ARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSS 1019

Query: 562  SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
             G         H    + G+         ++D++ ++G +  A     N     D + W 
Sbjct: 1020 LGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQD-GFDLASWN 1078

Query: 622  ALLGACRIHGN 632
            A++    + G+
Sbjct: 1079 AMMHGYIVSGD 1089



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 27/200 (13%)

Query: 35   QISPDCLENESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
            ++ PD       E  F  L ++C   T L   +++HA  V        F  T LV+ YA 
Sbjct: 1205 KVQPD-------EYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAK 1257

Query: 92   LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
             G++  +R  F   +   + +WN+MI    + G   EA+  F++   + G+ PD  TF  
Sbjct: 1258 CGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQ-FFEEMKSRGVTPDRVTFIG 1316

Query: 152  VLKAC----------RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
            VL AC           N    +KI+      G E ++   + L+    R G    A K+ 
Sbjct: 1317 VLSACSHSGLVSEAYENFYSMQKIY------GIEPEIEHYSCLVDALSRAGRIREAEKVI 1370

Query: 202  DDMPVRDSGSWNAMISGYCQ 221
              MP   S S    +   C+
Sbjct: 1371 SSMPFEASASMYRTLLNACR 1390


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 296/833 (35%), Positives = 465/833 (55%), Gaps = 42/833 (5%)

Query: 27  FSAAANSLQISPDCLENESREIDFD-DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKL 85
           FS    ++  S   L N+S+         ++C  +  +K  H  L   G    V + TKL
Sbjct: 10  FSPMVLAISTSKPSLPNQSKRTKATPSSLKNCKTIDELKMFHLSLTKQGLDDDVSAITKL 69

Query: 86  VNFYANLG---DLSFSRHTFDH-ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           V     LG    LSF++  F++  SY   + +NS+I  Y   G   EA+  F +  + SG
Sbjct: 70  VARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRM-MNSG 128

Query: 142 LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           + PD YTFP  L  C   R+  +G +IH  ++K+ +  D+FV  SL+H Y   G  + AR
Sbjct: 129 ISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCAR 188

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARS 257
           K+FD+M  R+  SW +MI GY +   A +A+D+   M R E V  + +T+  ++  CA+ 
Sbjct: 189 KVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKL 248

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           +++ +G  ++ +I   G+E N  + + L++MY K   +  A R+FD+    ++   N++ 
Sbjct: 249 EDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMA 308

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           + Y +      A G    M  +GI+PD ++++S  S  +QL +    +S HG+++R G+ 
Sbjct: 309 SNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 368

Query: 378 MEDVIIGNAVVDMYAKL-------------------------------GIINSACAVFEG 406
             D I  NA++DMY K                                G +++A   F  
Sbjct: 369 SWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNT 427

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +P K+++SWNT+I+   Q  +  EAIEVF  M+    +N +  T +SI  A  H+GAL  
Sbjct: 428 MPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDL 487

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
              I+  + KN +  DV + T LVDM+ +CG  + AMS+F  +       W A I    +
Sbjct: 488 AKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 547

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
            G  ++A+  F +M+++G++PD + F+  LTAC H GLV +G+  F+ M++  G+ P   
Sbjct: 548 AGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDV 607

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HYGCMVDL GRAG L  A   I++MP  P+  IW +LL ACR+ GN+E+ A A++++  +
Sbjct: 608 HYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVL 667

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
             E  G YVL+SN+YA+ G+W  + +VR   +++GL+K PG S I++  K   F +G+ +
Sbjct: 668 APERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDES 727

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP+  KI   L  L+ +   LG+VPD S VL DV+E EK  +L+ HSE+LA+AFG+ISS 
Sbjct: 728 HPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSN 787

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
             + I+I KNLRVC  CH++ KF S++  REII+RD+NRFH  + G CSC D+
Sbjct: 788 KGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 290/706 (41%), Positives = 407/706 (57%), Gaps = 40/706 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRD 208
           +L  C+ L   K+IH  ++K G     F  + L+  +C     G  + A  LF  +   +
Sbjct: 34  LLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIE-FCAVSPHGDLSYALSLFKTIRNPN 92

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN MI G   S +   AL+    M   G   +  T  SI   C +      G  +H 
Sbjct: 93  HVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHA 152

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFG------------MMRHAL----------------- 299
           +++K GLE N FV  +LINMYA+ G             MR A+                 
Sbjct: 153 HVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDE 212

Query: 300 --RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
              +FD++  RDVVSWN++I+ Y QS     A  FF  M++A + P++ T++S+ S  AQ
Sbjct: 213 ARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQ 272

Query: 358 L-NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
             +  +    V  +I  RG    ++ + N ++DMY K G +  A  +FE +  K+V+SWN
Sbjct: 273 SGSSLQLGNWVRSWIEDRG-LGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWN 331

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +I GY       EA+ +F+ M + N I+PN  T++SILPA +++GAL  G  +HA V K
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSN-IDPNDVTFLSILPACANLGALDLGKWVHAYVDK 390

Query: 477 NCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           N       VA  T L+DMY KCG +  A  +F  +   S   WNA+IS   +HG  D AL
Sbjct: 391 NMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTAL 450

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +M  EG  PD ITFV +LTAC H+GL+S G+RYF  M +++ + P L HYGCM+DL
Sbjct: 451 GLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDL 510

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
           FGRAG    A   ++NM ++PD +IW +LLGACRIH  +EL    +  LFE++ EN   Y
Sbjct: 511 FGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAY 570

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA  G+WE V ++R+   D  +KK PG SSIEV++ V  F  G++ HP+  +IY
Sbjct: 571 VLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIY 630

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  +  +++  G+VPD S VL D++E+ KE +L+ HSE+LAIAFG+IS+ P + I+I 
Sbjct: 631 KMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIM 690

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVCG+CH+ TK IS+I  REII RD NRFHHFKDG CSC DYW
Sbjct: 691 KNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 280/545 (51%), Gaps = 44/545 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L  +C  L  +K++H+ ++ +G   T F+ +KL+ F A    GDLS++   F  I   N 
Sbjct: 34  LLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNH 93

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHC 167
             WN MI           A++ +Y   ++SG  P+ YTFP + K+C   R   +GK++H 
Sbjct: 94  VIWNHMIRGLSSSESPFLALE-YYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHA 152

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFG-LANV------------------------------ 196
            VLKLG E + FV  SL++MY + G L N                               
Sbjct: 153 HVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDE 212

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR+LFD++PVRD  SWNAMISGY QSG   EA+   +EMR   V+ +  T+ S+L  CA+
Sbjct: 213 ARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQ 272

Query: 257 SDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           S + L  G  +  +I   GL  N+ + N LI+MY K G +  A  +F+++ +++VVSWN 
Sbjct: 273 SGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNV 332

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  Y   +    A G F  M Q+ I P+ +T +S+    A L      + VH ++ +  
Sbjct: 333 MIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNM 392

Query: 376 WFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
             M++ + +  +++DMYAK G +  A  +F+ +  K + +WN +I+G+A +G    A+ +
Sbjct: 393 KSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGL 452

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMY 493
           F  M     + P+  T+V +L A  H G L  G +  + +I++  +   +    C++D++
Sbjct: 453 FSRMTSEGFV-PDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLF 511

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           G+ G  D+A +L   +  +     W +++    IH + + A +  + + +  + P++ + 
Sbjct: 512 GRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFE--LEPENPSA 569

Query: 553 VSLLT 557
             LL+
Sbjct: 570 YVLLS 574



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 208/476 (43%), Gaps = 44/476 (9%)

Query: 43  NESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDL---- 95
            E  E  F  +F+SCTK+   H  K++HA ++  G     F  T L+N YA  G+L    
Sbjct: 124 TEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNAR 183

Query: 96  ------------SFS---------------RHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
                       SF+               R  FD I  R+V +WN+MIS Y + GR+ E
Sbjct: 184 LVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEE 243

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKAC----RNLVDGKKIHCSVLKLGFEWDVFVAASL 184
           A+  F++    + + P+  T   VL AC     +L  G  +   +   G   ++ +   L
Sbjct: 244 AM-AFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGL 302

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           + MY + G    A  LF+ +  ++  SWN MI GY       EAL +   M    +  + 
Sbjct: 303 IDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPND 362

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           +T  SILP CA    +  G  +H Y+ K+   ++  + +  +LI+MYAK G +  A R+F
Sbjct: 363 VTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIF 422

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M  + + +WN++I+ +       TA G F+ M   G  PD +T V + +         
Sbjct: 423 DCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLS 482

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
             R     +++       +     ++D++ + G+ + A  + + + +K D   W +L+  
Sbjct: 483 LGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGA 542

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
              +     A  V + + E    NP+   YV +   Y+  G      KI  R+  N
Sbjct: 543 CRIHRRIELAESVAKHLFELEPENPS--AYVLLSNIYAGAGRWEDVAKIRTRLNDN 596


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/745 (36%), Positives = 437/745 (58%), Gaps = 63/745 (8%)

Query: 138 LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           L +G R D +T P VLKAC  L     G   H  +   GFE +VF+  +L+ MY R G  
Sbjct: 2   LRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL 61

Query: 195 NVARKLFDDMPVR---DSGSWNAMISGYCQSGNAVEALDILDEMRL------EGVSMDPI 245
             A  +FD++  R   D  SWN+++S + +S NA  ALD+  +M L           D I
Sbjct: 62  EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 121

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           ++ +ILP C     +     +H   +++G   ++FV N LI+ YAK G+M +A++VF+ M
Sbjct: 122 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM 181

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ--------------------------- 338
             +DVVSWN+++A Y QS +   A   F  M++                           
Sbjct: 182 EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 241

Query: 339 --------AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR---------GWFMEDV 381
                   +G  P+ +T++S+ S  A L        +H + ++          G   ED+
Sbjct: 242 NVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL 301

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYAQNGLASEAIEVF-QMM 438
           ++ NA++DMY+K     +A ++F+ +P+  ++V++W  +I G+AQ G +++A+++F +M+
Sbjct: 302 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 361

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD---VFVATCLVDMYGK 495
            E   + PN  T   IL A +H+ A+R G +IHA V+++   +D    FVA CL++MY K
Sbjct: 362 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ-YDSSAYFVANCLINMYSK 420

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG +D A  +F  + + S++ W ++++ +G+HG+G +AL+ F +M   G  PD ITF+ +
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           L ACSH G+V +G  YF  M  ++G+ P  +HY   +DL  R G L  A   +++MP+ P
Sbjct: 481 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEP 540

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
            A +W ALL ACR+H N+EL   A ++L E+++EN G Y L+SNIYA  G+W+ V  +R 
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRH 600

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
           L +  G+KK PG S ++       F+ G+R+HP   +IY  L +L  ++K++GYVP+ +F
Sbjct: 601 LMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNF 660

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
            L DV+E+EK ++L  HSE+LA+A+G++++ P  PI+I KNLRVCGDCH+   +IS+I +
Sbjct: 661 ALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVD 720

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
            EI+VRD +RFHHFK+G CSCG YW
Sbjct: 721 HEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 273/599 (45%), Gaps = 91/599 (15%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR---NVYTWNSMISVYVR 122
            H L+  +G    VF    LV  Y+  G L  +   FD I+ R   +V +WNS++S +V+
Sbjct: 32  FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 91

Query: 123 CGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACRNLV---DGKKIHCSVLKLGF 174
                 A+D F + TL    +P     D  +   +L AC +L      K++H + ++ G 
Sbjct: 92  SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 151

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
             DVFV  +L+  Y + GL   A K+F+ M  +D  SWNAM++GY QSGN   A ++   
Sbjct: 152 FLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKN 211

Query: 235 MRLEGVSMDP-----------------------------------ITVASILPVCARSDN 259
           MR E + +D                                    +T+ S+L  CA    
Sbjct: 212 MRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGA 271

Query: 260 ILSGLLIHLYIVKH----------GLEFNLFVSNNLINMYAKFGMMRHALRVFDQ--MME 307
              G+ IH Y +K+          G + +L V N LI+MY+K    + A  +FD   + E
Sbjct: 272 FSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 331

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           R+VV+W  +I  + Q  D   A   F  M  +  G+ P+  T+  +    A L   R  +
Sbjct: 332 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 391

Query: 366 SVHGFIMRRGWFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
            +H +++R   +      + N +++MY+K G +++A  VF+ +  K  ISW +++TGY  
Sbjct: 392 QIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 451

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           +G  SEA+++F  M +   + P+  T++ +L A SH G + QG+            FD  
Sbjct: 452 HGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLSY----------FDSM 500

Query: 485 VA-----------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDK 532
            A              +D+  + GR+D A      +P   ++V W A++S   +H   + 
Sbjct: 501 SADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVEL 560

Query: 533 ALNFFRQMLDEGVRPD-HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           A +   ++++     D   T +S + A   +G   +  R  H+M++  GIK   K  GC
Sbjct: 561 AEHALNKLVEMNAENDGSYTLISNIYAT--AGRWKDVARIRHLMKKS-GIK---KRPGC 613



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 207/487 (42%), Gaps = 73/487 (14%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I   ++  +C  L  V   K +H   + +G    VF    L++ YA  G +  +   F+ 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCF------------------------------- 133
           + +++V +WN+M++ Y + G    A + F                               
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 134 ---YQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLK----------LGFEWD 177
              ++  + SG  P+  T   VL AC +L     G +IH   LK           G + D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEM 235
           + V  +L+ MY +      AR +FDD+P+  R+  +W  MI G+ Q G++ +AL +  EM
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 236 RLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL--EFNLFVSNNLINMYAK 291
             E  GV+ +  T++ IL  CA    I  G  IH Y+++H        FV+N LINMY+K
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV-- 349
            G +  A  VFD M ++  +SW S++  Y        A   F  M++AG  PD +T +  
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480

Query: 350 ----SLTSIVAQLNDCRNSRSV-HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
               S   +V Q     +S S  +G   R   +          +D+ A+ G ++ A    
Sbjct: 481 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY-------AIDLLARFGRLDKAWKTV 533

Query: 405 EGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           + +P++   + W  L++    +     A      + E N    N G+Y  I   Y+  G 
Sbjct: 534 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA--ENDGSYTLISNIYATAGR 591

Query: 464 LRQGIKI 470
            +   +I
Sbjct: 592 WKDVARI 598



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 160/350 (45%), Gaps = 54/350 (15%)

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M +AG + D  TL  +     +L   R   + HG I   G F  +V I NA+V MY++ G
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNG-FESNVFICNALVAMYSRCG 59

Query: 396 IINSACAVFEGLP---VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG--- 449
            +  A  +F+ +    + DVISWN++++ + ++  A  A+++F  M       P      
Sbjct: 60  SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 119

Query: 450 --TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF- 506
             + V+ILPA   + A+ Q  ++H   I+N    DVFV   L+D Y KCG +++A+ +F 
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179

Query: 507 -----------------------------YQVPRSSSVP-----WNAIISCHGIHGQGDK 532
                                        ++  R  ++P     W A+I+ +   G   +
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG--------QRYFHMMQEEFGIKPH 584
           ALN FRQM+  G  P+ +T +S+L+AC+  G  S+G        +     +  +FG +  
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 585 -LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP-DASIWGALLGACRIHGN 632
            L  Y  ++D++ +      A +   ++P+   +   W  ++G    +G+
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 349


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 265/689 (38%), Positives = 408/689 (59%), Gaps = 33/689 (4%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG-SWNAMISGYC 220
            K++H  +L+        ++ ++L +Y    L + +  +F+ +P   +  +W ++I  Y 
Sbjct: 24  AKQLHAQILRTSLPSPSLLS-TILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
             G  + +L    +M   G   D     S+L  C    ++  G  +H  I++ G+ F+L+
Sbjct: 83  SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142

Query: 281 VSNNLINMYAKFGMMRHA-----------------------------LRVFDQMMERDVV 311
             N L+NMY+KF  +                                 +VF+ M +RD+V
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I+   Q+     A      M  A ++PD  TL S+  I A+  +    + +HG+ 
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           +R G +  DV IG++++DMYAK   ++ +C VF  LP  D ISWN++I G  QNG+  E 
Sbjct: 263 IRNG-YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           ++ FQ M    +I PN  ++ SI+PA +H+  L  G ++H  +I++    +VF+A+ LVD
Sbjct: 322 LKFFQQML-IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVD 380

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KCG I  A  +F ++     V W A+I  + +HG    A++ F++M  EGV+P+++ 
Sbjct: 381 MYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVA 440

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F+++LTACSH+GLV E  +YF+ M +++ I P L+HY  + DL GR G L  A+ FI +M
Sbjct: 441 FMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM 500

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
            + P  S+W  LL ACR+H N+EL    S +LF VD +N+G YVL+SNIY+  G+W+   
Sbjct: 501 HIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDAR 560

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           ++R   RD+G+KK P  S IE+ NKV  F  G+++HP Y++I + L+ L  +M+  GYV 
Sbjct: 561 KLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVL 620

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D + VL DVEE++K ++L SHSERLAI FGIIS+P  + I++ KNLRVC DCH  TKFIS
Sbjct: 621 DTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFIS 680

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I  REI+VRD++RFHHFKDG CSCGD+W
Sbjct: 681 KIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 276/557 (49%), Gaps = 43/557 (7%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVY 120
             K+LHA ++ +        ST +++ Y+NL  L  S   F+ + S      W S+I  Y
Sbjct: 23  QAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWD 177
              G    ++  F Q  L SG  PD   FP VLK+C   ++L  G+ +H  +++LG  +D
Sbjct: 82  TSHGLFLHSLSFFIQM-LASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD 140

Query: 178 VFVAASLLHMYCRF-GLANV----------------------------ARKLFDDMPVRD 208
           ++   +L++MY +F  L  V                             RK+F+ MP RD
Sbjct: 141 LYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRD 200

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN +ISG  Q+G   +AL ++ EM    +  D  T++S+LP+ A   N+L G  IH 
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHG 260

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           Y +++G + ++F+ ++LI+MYAK   +  + RVF  + + D +SWNSIIA   Q+     
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDE 320

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
              FF  M  A I+P+ ++  S+    A L      + +HG+I+R   F  +V I +A+V
Sbjct: 321 GLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR-FDGNVFIASALV 379

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G I +A  +F+ + + D++SW  +I GYA +G A +AI +F+ M E   + PN 
Sbjct: 380 DMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM-EVEGVKPNY 438

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV-DMYGKCGRIDDAMSLF- 506
             ++++L A SH G + +  K    + ++            V D+ G+ GR+++A     
Sbjct: 439 VAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFIS 498

Query: 507 -YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
              +  + SV W+ +++   +H   + A    +++    V P +I    LL+    +   
Sbjct: 499 DMHIEPTGSV-WSTLLAACRVHKNIELAEKVSKKLFT--VDPQNIGAYVLLSNIYSAAGR 555

Query: 566 SEGQRYFHMMQEEFGIK 582
            +  R   +   + G+K
Sbjct: 556 WKDARKLRIAMRDKGMK 572



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 134/276 (48%), Gaps = 14/276 (5%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           +F     L   K +H   + +G    VF  + L++ YA    +  S   F  +   +  +
Sbjct: 245 IFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 304

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WNS+I+  V+ G   E +  F+Q  L + ++P+  +F  ++ AC +L     GK++H  +
Sbjct: 305 WNSIIAGCVQNGMFDEGLK-FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++  F+ +VF+A++L+ MY + G    AR +FD M + D  SW AMI GY   G+A +A+
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 423

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGL-----LIHLYIVKHGLEFNLFVSNN 284
            +   M +EGV  + +   ++L  C+ +  +         +   Y +  GLE    V+  
Sbjct: 424 SLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVA-- 481

Query: 285 LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             ++  + G +  A      M +E     W++++AA
Sbjct: 482 --DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA 515



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 13/210 (6%)

Query: 48  IDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  +  +C   T LH  K+LH  ++ S     VF ++ LV+ YA  G++  +R  FD 
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 397

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG 162
           +   ++ +W +MI  Y   G   +A+  F +  +  G++P++  F  VL AC +  LVD 
Sbjct: 398 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV-EGVKPNYVAFMAVLTACSHAGLVDE 456

Query: 163 KKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGY 219
              + + +   +     +   A++  +  R G    A +   DM +  +GS W+ +++  
Sbjct: 457 AWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA- 515

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           C+    +E   + +++  +  ++DP  + +
Sbjct: 516 CRVHKNIE---LAEKVSKKLFTVDPQNIGA 542


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/724 (37%), Positives = 431/724 (59%), Gaps = 25/724 (3%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F+ +++ + + WN +I  Y   G   EA+D +Y+     G+R D +TFP V+KAC  L+ 
Sbjct: 81  FEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRME-CEGIRSDNFTFPFVIKACGELLA 139

Query: 162 ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              G+K+H  ++K+GF+ DV+V   L+ MY + G   +A K+FD+MPVRD  SWN+M+SG
Sbjct: 140 LMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSG 199

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y   G+ + +L    EM   G   D   + S L  C+    + SG+ IH  +++  LE +
Sbjct: 200 YQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELD 259

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           + V  +LI+MY K G + +A RVF+++  +++V+WN++I   ++ +  I           
Sbjct: 260 IMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVI----------- 308

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
               PD++T+++L    +Q       +S+HGF +R+  F+  +++  A+VDMY K G + 
Sbjct: 309 ----PDVITMINLLPSCSQSGALLEGKSIHGFAIRK-MFLPYLVLETALVDMYGKCGELK 363

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPA 457
            A  VF  +  K+++SWNT++  Y QN    EA+++FQ +   NE + P+  T  S+LPA
Sbjct: 364 LAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHI--LNEPLKPDAITIASVLPA 421

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + + +  +G +IH+ ++K  L  + F++  +V MY KCG +  A   F  +     V W
Sbjct: 422 VAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSW 481

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           N +I  + IHG G  ++ FF +M  +G +P+  TFVSLLTACS SGL+ EG  +F+ M+ 
Sbjct: 482 NTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKV 541

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           E+GI P ++HYGCM+DL GR G+L  A  FI+ MP+ P A IWG+LL A R H ++ L  
Sbjct: 542 EYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAE 601

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
           +A+  +  +  +N G YVL+SN+YA  G+WE VD ++ L +++GL KT G S +++N + 
Sbjct: 602 LAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRS 661

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD-KSFVLQDVEEDEKEHILTSHSERL 756
           + F   +R+H     IYD L  L  K+    Y+     F   DV + ++ +    HS +L
Sbjct: 662 ESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAK-KRGNSPEYHSVKL 720

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           AI FG+IS+   +P+ + KN R+C DCH   K ISQ+T+REI+V D+  FHHF+DG CSC
Sbjct: 721 AICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSC 780

Query: 817 GDYW 820
            DYW
Sbjct: 781 RDYW 784



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 285/570 (50%), Gaps = 34/570 (5%)

Query: 39  DCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           +C    S    F  + ++C +L  +   +++H  L+  G    V+    L++ Y  +G +
Sbjct: 116 ECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFI 175

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             +   FD +  R++ +WNSM+S Y   G    ++ CF +  L  G + D +     L A
Sbjct: 176 ELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEM-LRLGNKADRFGMISALGA 234

Query: 156 C---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C     L  G +IHC V++   E D+ V  SL+ MY + G  + A ++F+ +  ++  +W
Sbjct: 235 CSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAW 294

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NAMI G  +    +                D IT+ ++LP C++S  +L G  IH + ++
Sbjct: 295 NAMIGGMQEDDKVIP---------------DVITMINLLPSCSQSGALLEGKSIHGFAIR 339

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                 L +   L++MY K G ++ A  VF+QM E+++VSWN+++AAY Q+     A   
Sbjct: 340 KMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKM 399

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  +    ++PD +T+ S+   VA+L      + +H +IM+ G    +  I NA+V MYA
Sbjct: 400 FQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLG-LGSNTFISNAIVYMYA 458

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G + +A   F+G+  KDV+SWNT+I  YA +G    +I+ F  M       PN  T+V
Sbjct: 459 KCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRG-KGFKPNGSTFV 517

Query: 453 SILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           S+L A S  G + +G    ++  ++  +   +    C++D+ G+ G +D+A     ++P 
Sbjct: 518 SLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPL 577

Query: 512 SSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQ 569
             +   W ++++    H     A    R +L   ++ D+   +V L    + +G   +  
Sbjct: 578 VPTARIWGSLLAASRNHNDVVLAELAARHILS--LKHDNTGCYVLLSNMYAEAGRWEDVD 635

Query: 570 RYFHMMQEEFGIKPHLKHYGC-MVDLFGRA 598
           R  ++M+E+ G+   +K  GC MVD+ GR+
Sbjct: 636 RIKYLMKEQ-GL---VKTVGCSMVDINGRS 661



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 226/440 (51%), Gaps = 19/440 (4%)

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           GL   A  +F+ M   D+  WN +I GY  +G   EA+D    M  EG+  D  T   ++
Sbjct: 72  GLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVI 131

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C     ++ G  +H  ++K G + +++V N LI+MY K G +  A +VFD+M  RD+V
Sbjct: 132 KACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLV 191

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWNS+++ Y+   D +++   F  M + G + D   ++S     +  +  R+   +H  +
Sbjct: 192 SWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQV 251

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           +R    + D+++  +++DMY K G ++ A  VF  +  K++++WN +I G          
Sbjct: 252 IRSELEL-DIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG---------- 300

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
                 M+E +++ P+  T +++LP+ S  GAL +G  IH   I+      + + T LVD
Sbjct: 301 ------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVD 354

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MYGKCG +  A  +F Q+   + V WN +++ +  + Q  +AL  F+ +L+E ++PD IT
Sbjct: 355 MYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAIT 414

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
             S+L A +     SEG++  H    + G+  +      +V ++ + G L  A  F   M
Sbjct: 415 IASVLPAVAELASRSEGKQ-IHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGM 473

Query: 612 PVRPDASIWGALLGACRIHG 631
            V  D   W  ++ A  IHG
Sbjct: 474 -VCKDVVSWNTMIMAYAIHG 492



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 175/338 (51%), Gaps = 19/338 (5%)

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           + + G+M +AL +F++M   D   WN II  Y  +     A  F+  M+  GI+ D  T 
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
             +     +L      + VHG +++ G F  DV + N ++DMY K+G I  A  VF+ +P
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIG-FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMP 186

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           V+D++SWN++++GY  +G    ++  F+ M        ++   +S L A S    LR G+
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGN-KADRFGMISALGACSIEHCLRSGM 245

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +IH +VI++ L  D+ V T L+DMYGKCG++D A  +F ++   + V WNA+I   G+  
Sbjct: 246 EIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIG--GMQE 303

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
                        D+ V PD IT ++LL +CS SG + EG+   H         P+L   
Sbjct: 304 -------------DDKVIPDVITMINLLPSCSQSGALLEGKS-IHGFAIRKMFLPYLVLE 349

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
             +VD++G+ G L +A +    M  +   S W  ++ A
Sbjct: 350 TALVDMYGKCGELKLAEHVFNQMNEKNMVS-WNTMVAA 386


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 288/786 (36%), Positives = 443/786 (56%), Gaps = 45/786 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+LHA +   G+         LVN Y   GD+  +R  FD I+ R+  +WNSMI+   R 
Sbjct: 105 KQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRF 164

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVF 179
                AV  F +  L   + P  +T   V  AC NL++G    K++H  VL+ G +W  F
Sbjct: 165 EEWELAVHLF-RLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTF 222

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
              +L+ MY + G    A+ LFD    +D  SWN +IS   Q+    EAL  L  M   G
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIV-KHGLEFNLFVSNNLINMYAKFGMMRHA 298
           V  + +T+AS+LP C+  + +  G  IH +++  + L  N FV   L++MY         
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQ 357
             VFD M  R +  WN++IA Y ++     A   F  M  + G+ P+ +TL S+     +
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                +   +H  +++ G F +D  + NA++DMY+++G I  A ++F  +  KD++SWNT
Sbjct: 403 CESFLDKEGIHSCVVKWG-FEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNT 461

Query: 418 LITGYA---------------QNGLASEAIEVFQMMEECNE--INPNQGTYVSILPAYSH 460
           +ITGY                Q G A   I  F   E+     + PN  T +++LP  + 
Sbjct: 462 MITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + AL +G +IHA  +K  L  DV V + LVDMY KCG ++ + ++F Q+   + + WN +
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVL 581

Query: 521 ISCHGIHGQGDKALNFFRQMLDEG-----VRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           I  +G+HG+G++AL  FR+M++EG     +RP+ +T++++  + SHSG+V EG   F+ M
Sbjct: 582 IMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTM 641

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGACRIHGNME 634
           + + GI+P   HY C+VDL GR+G +  A+N I+ MP        W +LLGAC+IH N+E
Sbjct: 642 KAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLE 701

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G +A+  LF +D   + Y    S +   +             +++G++K PG S IE  
Sbjct: 702 IGEIAAKNLFVLDPNVLDYGTKQSMLGRKM-------------KEKGVRKEPGCSWIEHG 748

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
           ++V  F  G+ +HP+ +++++ L  L+ +MK  GYVPD S VL +V E+EKE +L  HSE
Sbjct: 749 DEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSE 808

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           RLAIAFG++++ P + I++ KNLRVC DCH  TKFIS+I +REII+RD  RFHHF++G C
Sbjct: 809 RLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTC 868

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 869 SCGDYW 874



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 288/584 (49%), Gaps = 38/584 (6%)

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           Y   +T+G+ PD + FP VLKA   + D   GK++H  V K G      V  SL++MY +
Sbjct: 73  YTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGK 132

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            G  + AR++FD++  RD  SWN+MI+  C+      A+ +   M LE V     T+ S+
Sbjct: 133 CGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSV 192

Query: 251 LPVCARSDNILSGLL----IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
              C+   N+++GLL    +H +++++G ++  F +N L+ MYAK G +  A  +FD   
Sbjct: 193 AHACS---NLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFD 248

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ++D+VSWN+II++  Q++    A  +   M Q+G++P+ +TL S+    + L      + 
Sbjct: 249 DKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKE 308

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H F++     +E+  +G A+VDMY           VF+G+  + +  WN +I GY +N 
Sbjct: 309 IHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNE 368

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              EAIE+F  M     ++PN  T  S+LPA     +      IH+ V+K     D +V 
Sbjct: 369 FDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQ 428

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM------ 540
             L+DMY + GRI+ A S+F  + R   V WN +I+ + + G+ D ALN    M      
Sbjct: 429 NALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAE 488

Query: 541 -----LDE-------GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
                 D+        ++P+ +T +++L  C+    + +G+   H    +  +   +   
Sbjct: 489 HRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQMLSKDVAVG 547

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
             +VD++ + G L ++    + M VR +   W  L+ A  +HG  E       R+ E   
Sbjct: 548 SALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRRMVEEGD 606

Query: 649 EN-------VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
            N       V Y  + +++  +    EG++   ++    G++ T
Sbjct: 607 NNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPT 650



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 206/425 (48%), Gaps = 15/425 (3%)

Query: 207 RDSGSWNAMISGYCQSGNAV-EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
           R    W + +    QS +   +A+     M   GV  D     ++L   A   ++  G  
Sbjct: 47  RLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQ 106

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H ++ K G      V N+L+NMY K G +  A RVFD++  RD VSWNS+I A  +  +
Sbjct: 107 LHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEE 166

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL-NDCRNSRSVHGFIMRRG-WFMEDVII 383
              A   F  M    + P   TLVS+    + L N     + VH F++R G W       
Sbjct: 167 WELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDW---RTFT 223

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            NA+V MYAKLG +  A  +F+    KD++SWNT+I+  +QN    EA+    +M +   
Sbjct: 224 NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG- 282

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDA 502
           + PN  T  S+LPA SH+  L  G +IHA V+  N L  + FV   LVDMY  C + +  
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTAC-- 559
             +F  + R +   WNA+I+ +  +    +A+  F +M+ E G+ P+ +T  S+L AC  
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
             S L  EG    H    ++G +        ++D++ R G + +A +   +M  R D   
Sbjct: 403 CESFLDKEG---IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVS 458

Query: 620 WGALL 624
           W  ++
Sbjct: 459 WNTMI 463



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 28/291 (9%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           C      + +H+ +V  G  K  +    L++ Y+ +G +  +R  F  ++ +++ +WN+M
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTM 462

Query: 117 ISVYVRCGRLSEAVDCF-----------------YQFTLTSGLRPDFYTFPPVLKACRNL 159
           I+ YV CGR  +A++                   Y+      L+P+  T   VL  C  L
Sbjct: 463 ITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAAL 522

Query: 160 V---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
                GK+IH   +K     DV V ++L+ MY + G  N++R +F+ M VR+  +WN +I
Sbjct: 523 AALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLI 582

Query: 217 SGYCQSGNAVEALDILDEMRLEG-----VSMDPITVASILPVCARSDNILSGL-LIHLYI 270
             Y   G   EAL +   M  EG     +  + +T  +I    + S  +  GL L +   
Sbjct: 583 MAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMK 642

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAA 319
            KHG+E        L+++  + G +  A  +   M    + V +W+S++ A
Sbjct: 643 AKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/742 (37%), Positives = 426/742 (57%), Gaps = 5/742 (0%)

Query: 78   TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY--Q 135
            +V  +  L++ +++   +  + + FDH++  ++ +WN+MIS Y   G   E++ CF+  +
Sbjct: 331  SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMR 390

Query: 136  FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                        +   V  +  NL  G+ IH  V+KLG + +V +  +LL +Y   G + 
Sbjct: 391  HLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 450

Query: 196  VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
             A  +F  M  RD  SWN+M++ Y Q G  ++ L IL E+   G  M+ +T AS L  C+
Sbjct: 451  DAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS 510

Query: 256  RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
              + ++   ++H  I+  G    L V N L+ MY K GMM  A +V   M + D V+WN+
Sbjct: 511  NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 570

Query: 316  IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC-RNSRSVHGFIMRR 374
            +I  + ++ +P  A   +  +++ GI  + +T+VS+    +  +D  ++   +H  I+  
Sbjct: 571  LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT 630

Query: 375  GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
            G F  D  + N+++ MYAK G +NS+  +F+GL  K  I+WN ++   A +G   EA+++
Sbjct: 631  G-FESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKI 689

Query: 435  FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
            F  M     +N +Q ++   L A +++  L +G ++H  VIK     D+ V    +DMYG
Sbjct: 690  FGEMRNVG-VNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYG 748

Query: 495  KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
            KCG + D + +  Q    S + WN +IS    HG   KA   F +ML  G +PDH+TFVS
Sbjct: 749  KCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVS 808

Query: 555  LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
            LL+AC+H GLV EG  Y+  M  EFG+ P ++H  C++DL GR+G L  A  FI+ MPV 
Sbjct: 809  LLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVP 868

Query: 615  PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
            P+   W +LL ACRIHGN+EL    ++ L E+D  +   YVL SN+ A  GKWE V+ +R
Sbjct: 869  PNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLR 928

Query: 675  SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
                   +KK P  S +++ +KV  F  G + HP+  +I  +L  L    K  GYVPD S
Sbjct: 929  KEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTS 988

Query: 735  FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
            F L D++E++KE+ L +HSERLA+AFG+I++P  S ++IFKNLRVCGDCH+  KF+S I 
Sbjct: 989  FALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIV 1048

Query: 795  EREIIVRDSNRFHHFKDGICSC 816
             R+I++RD  RFHHF  G CSC
Sbjct: 1049 GRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 309/584 (52%), Gaps = 12/584 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F   T     K LHA  +V      +F +  L+N Y+  G++  +R+ FD + +RN  +W
Sbjct: 104 FSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 163

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSV 169
           ++M+S YVR G   EAV  F Q     G+ P+ +    ++ AC        +G ++H  V
Sbjct: 164 STMLSGYVRVGLYEEAVGLFCQM-WGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 222

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K G   DV+V  +L+H Y   GL   A+KLF++MP  +  SW +++ GY  SGN  E L
Sbjct: 223 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVL 282

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           ++   MR EGVS +  T A++   C   ++ + G  +  +I+++G E ++ V+N+LI+M+
Sbjct: 283 NVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMF 342

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           + F  +  A  VFD M E D++SWN++I+AY        +   F  M+    + +  TL 
Sbjct: 343 SSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLS 402

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL S+ + +++ +  R +HG +++ G    +V I N ++ +Y++ G    A  VF+ +  
Sbjct: 403 SLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 461

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +D+ISWN+++  Y Q+G   + +++   + +  ++  N  T+ S L A S+   L +   
Sbjct: 462 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKV-MNHVTFASALAACSNPECLIESKI 520

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +HA +I       + V   LV MYGK G + +A  +   +P+   V WNA+I  H  + +
Sbjct: 521 VHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEE 580

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSH-SGLVSEGQR-YFHMMQEEFGIKPHLKH 587
            ++A+  ++ + ++G+  ++IT VS+L ACS    L+  G   + H++   F    ++K+
Sbjct: 581 PNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN 640

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
              ++ ++ + G L  + N+I +         W A++ A   HG
Sbjct: 641 --SLITMYAKCGDLN-SSNYIFDGLGNKSPITWNAMVAANAHHG 681



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 12/268 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H   +HA +V++G     +    L+  YA  GDL+ S + FD +  ++  TWN+M++ 
Sbjct: 617 LKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAA 676

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
               G   EA+  F +     G+  D ++F   L A  NL    +G+++H  V+KLGFE 
Sbjct: 677 NAHHGCGEEALKIFGEMR-NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFES 735

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+ V  + + MY + G  +   K+      R   SWN +IS + + G   +A +   EM 
Sbjct: 736 DLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEML 795

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKF 292
             G   D +T  S+L  C     +  GL  +  + +   EF +F        +I++  + 
Sbjct: 796 KLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIIDLLGRS 852

Query: 293 GMMRHALRVFDQM-MERDVVSWNSIIAA 319
           G + HA     +M +  + ++W S++AA
Sbjct: 853 GRLSHAEGFIKEMPVPPNDLAWRSLLAA 880



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 1/178 (0%)

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L  +S + +   G  +HA  I   +   +F    L++MY K G I+ A  +F ++   + 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
             W+ ++S +   G  ++A+  F QM   GV P+     SL+TACS SG +++     H 
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
              + GI   +     +V  +G  G +  A    + MP     S W +L+      GN
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS-WTSLMVGYSDSGN 277


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 263/658 (39%), Positives = 408/658 (62%), Gaps = 5/658 (0%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  ++  G     F+    ++     G    ARK+FD+ P      WNA+I GY    
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A+++   M+  GV+ D  T+  +L  C+    +  G  +H  I + G E ++FV N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+ +YAK G +  A  VF+ + +R++VSW S+I+ Y Q+  P+ A   F  M+Q  ++P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKLGIINSACA 402
           D + LVS+      + D    +S+HG +++ G  F  D++I  ++  MYAK G +  A +
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARS 326

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F+ + + +V+ WN +I+GYA+NG  +EA+ +FQ M   N I  +  T  S + A + VG
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN-IRTDSITVRSAILACAQVG 385

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           +L     +   + K     DVFV T L+DM+ KCG +D A  +F +      V W+A+I 
Sbjct: 386 SLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIV 445

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+HG+G  A++ F  M   GV P+ +TFV LLTAC+HSGLV EG   FH M+  +GI+
Sbjct: 446 GYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIE 504

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
              +HY C+VDL GR+GHL  A++FI  MP+ P  S+WGALLGAC+I+ ++ LG  A+++
Sbjct: 505 ARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQ 564

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LF +D  N G+YV +SN+YA+   W+ V +VR L R++GL K  G+S IE+N K+  F  
Sbjct: 565 LFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRV 624

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+++HP++++I++EL +L  ++K  G++P    VL D+ ++EKE  L +HSERLAIA+G+
Sbjct: 625 GDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGL 684

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ P + ++I KNLR C +CH+ TK IS++  REI+VRD+NRFHHFK+G+CSC DYW
Sbjct: 685 ISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 159/487 (32%), Positives = 256/487 (52%), Gaps = 11/487 (2%)

Query: 49  DFDDLFQS----CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           DFD  F S         H+ ++HA LVVSG +++ F  TK VN   N+G++ ++R  FD 
Sbjct: 69  DFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDE 128

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVD 161
               +V+ WN++I  Y       +A++  Y     SG+ PD +T P VLKAC     L  
Sbjct: 129 FPEPSVFLWNAIIRGYSSHNFFGDAIE-MYSRMQASGVNPDGFTLPCVLKACSGVPVLEV 187

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK++H  + +LGFE DVFV   L+ +Y + G    AR +F+ +  R+  SW +MISGY Q
Sbjct: 188 GKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQ 247

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G  +EAL I  +MR   V  D I + S+L      +++  G  IH  +VK GLEF   +
Sbjct: 248 NGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL 307

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
             +L  MYAK G +  A   FDQM   +V+ WN++I+ Y ++     A G F  M    I
Sbjct: 308 LISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNI 367

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + D +T+ S     AQ+     ++ +  +I  +  +  DV +  A++DM+AK G ++ A 
Sbjct: 368 RTDSITVRSAILACAQVGSLDLAKWMGDYI-NKTEYRNDVFVNTALIDMFAKCGSVDLAR 426

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+    KDV+ W+ +I GY  +G   +AI++F  M++   + PN  T+V +L A +H 
Sbjct: 427 EVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAG-VCPNDVTFVGLLTACNHS 485

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAI 520
           G + +G ++   +    +        C+VD+ G+ G +++A      +P    V  W A+
Sbjct: 486 GLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGAL 545

Query: 521 ISCHGIH 527
           +    I+
Sbjct: 546 LGACKIY 552


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/707 (38%), Positives = 407/707 (57%), Gaps = 42/707 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL--HMYCRFGLANVARKLFDDMPVRDS 209
            +  C +    K++H  +L+ G  +D F A+ L        F   + AR LFD +P  + 
Sbjct: 31  TIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNL 90

Query: 210 GSWNAMISGYCQSGNAVEA----LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            +WN +I  Y  S +  ++    LD+LD  + E +  +  T   ++   +       G  
Sbjct: 91  YTWNTLIRAYASSSDPFQSFVIFLDLLD--KCEDLP-NKFTFPFVIKAASELKASRVGTA 147

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H   +K     +L++ N+L+  Y   G +  A R+F  +  +DVVSWNS+I+A+ Q N 
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNC 207

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
           P  A   F  M++  + P+ +T+V + S  A+  D    R V  +I R+G    D+ + N
Sbjct: 208 PEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG-IKVDLTLCN 266

Query: 386 AVVDMY-------------------------------AKLGIINSACAVFEGLPVKDVIS 414
           A++DMY                               AK+G  ++A  VF  +PVK++ +
Sbjct: 267 AMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAA 326

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN LI+ Y QNG   EA+ +F  ++      P++ T VS L A + +GA+  G  IH  +
Sbjct: 327 WNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI 386

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            +  +  +  + + LVDMY KCG ++ A+ +FY V       W+A+I+  G+HG+G  A+
Sbjct: 387 KREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAI 446

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F +M +  V+P+ +TF ++L ACSH+GLV EG+ +FH M+  +G+ P +KHY CMVD+
Sbjct: 447 DLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDI 506

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A   I  M   P AS+WGALLGAC +H N+ELG +ASD+L +++  N G  
Sbjct: 507 LGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAI 566

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA  G+WE V E+R L RD  LKK PG SSIE N  V  F  G+ THP    IY
Sbjct: 567 VLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIY 626

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQI 773
            +L  +  K+KS+GY P+KS +LQ +EED+ KE  L+ HSE+LAIAFG+++  P  PI++
Sbjct: 627 SKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRV 686

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KNLR+CGDCH + K +S++ +R+I++RD  RFHHF+DG CSC DYW
Sbjct: 687 VKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 253/510 (49%), Gaps = 41/510 (8%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWN 114
           C+    +K +HA ++ +G     FS++KL    A  +   L ++R+ FD I   N+YTWN
Sbjct: 35  CSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWN 94

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLK 171
           ++I  Y       ++   F          P+ +TFP V+KA   L     G  +H   +K
Sbjct: 95  TLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIK 154

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           L F  D+++  SL+  Y   G  ++A +LF  +  +D  SWN+MIS + Q     +AL++
Sbjct: 155 LSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALEL 214

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +M  E V  + +T+  +L  CA+  ++  G  +  YI + G++ +L + N +++MY K
Sbjct: 215 FLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTK 274

Query: 292 FGMMRHALRVFDQMMERDVVS-------------------------------WNSIIAAY 320
            G +  A ++FD+M ERDV S                               WN +I+AY
Sbjct: 275 CGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAY 334

Query: 321 EQSNDPITAHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           EQ+  P  A   F  +Q + I +PD +TLVS  S  AQL        +H +I R G  + 
Sbjct: 335 EQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLN 394

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
             +I +++VDMYAK G +  A  VF  +  +DV  W+ +I G   +G    AI++F  M+
Sbjct: 395 CHLI-SSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQ 453

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQG-IKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           E  ++ PN  T+ ++L A SH G + +G +  H       +  ++    C+VD+ G+ G 
Sbjct: 454 EA-KVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGF 512

Query: 499 IDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
           +++AM L  ++  + S   W A++    +H
Sbjct: 513 LEEAMELINEMSTTPSASVWGALLGACSLH 542



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 8/276 (2%)

Query: 354 IVAQLNDCRNSR---SVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPV 409
           I++ ++ C +S+    VH  ++R G F +             +    ++ A  +F+ +P 
Sbjct: 28  ILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQ 87

Query: 410 KDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            ++ +WNTLI  YA +    ++  +F  ++++C ++ PN+ T+  ++ A S + A R G 
Sbjct: 88  PNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PNKFTFPFVIKAASELKASRVGT 146

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
            +H   IK     D+++   LV  YG CG +  A  LF  +     V WN++IS      
Sbjct: 147 AVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGN 206

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
             + AL  F +M  E V P+ +T V +L+AC+   L  E  R+     E  GIK  L   
Sbjct: 207 CPEDALELFLKMERENVMPNSVTMVGVLSACAKK-LDLEFGRWVCSYIERKGIKVDLTLC 265

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
             M+D++ + G +  A      MP R D   W  +L
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEMPER-DVFSWTIML 300


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/666 (41%), Positives = 402/666 (60%), Gaps = 5/666 (0%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           + L  GK++H  ++  G+    F+   L++MY + G  + A KLFD MP R+  SW AMI
Sbjct: 19  KRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMI 78

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           SG  Q+    EA+     MR+ G        +S +  CA   +I  G  +H   +K G+ 
Sbjct: 79  SGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIG 138

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             LFV +NL +MY+K G M  A +VF++M  +D VSW ++I  Y +  +   A   F  M
Sbjct: 139 SELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKM 198

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
               +  D   L S       L  C+  RSVH  +++ G F  D+ +GNA+ DMY+K G 
Sbjct: 199 IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAGD 257

Query: 397 INSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           + SA  VF G+    ++V+S+  LI GY +     + + VF  +     I PN+ T+ S+
Sbjct: 258 MESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR-QGIEPNEFTFSSL 315

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           + A ++  AL QG ++HA+V+K     D FV++ LVDMYGKCG ++ A+  F ++   + 
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE 375

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           + WN+++S  G HG G  A+ FF +M+D GV+P+ ITF+SLLT CSH+GLV EG  YF+ 
Sbjct: 376 IAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYS 435

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M + +G+ P  +HY C++DL GRAG L  A  FI  MP  P+A  W + LGACRIHG+ E
Sbjct: 436 MDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G +A+++L +++ +N G  VL+SNIYAN  +WE V  VR   RD  +KK PG+S ++V 
Sbjct: 496 MGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVG 555

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
            K  +F   + +H +   IY++L  L  ++K+ GYVP    V  D+++  KE +L  HSE
Sbjct: 556 YKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSE 615

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           R+A+AF +IS P   PI + KNLRVC DCH+  KFIS++T R+IIVRD++RFHHF DG C
Sbjct: 616 RIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSC 675

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 676 SCGDYW 681



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 244/484 (50%), Gaps = 15/484 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           +    +L   K+LHALL+ +G     F +  LVN Y+  G+L  +   FD +  RN+ +W
Sbjct: 15  YAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSW 74

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
            +MIS   +  + SEA+  F    +  G  P  + F   ++AC +L     GK++HC  L
Sbjct: 75  TAMISGLSQNSKFSEAIRTFCGMRIC-GEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 133

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G   ++FV ++L  MY + G    A K+F++MP +D  SW AMI GY + G   EAL 
Sbjct: 134 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 193

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
              +M  E V++D   + S L  C        G  +H  +VK G E ++FV N L +MY+
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253

Query: 291 KFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           K G M  A  VF    E R+VVS+  +I  Y ++         F  +++ GI+P+  T  
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL    A          +H  +M+   F ED  + + +VDMY K G++  A   F+ +  
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGD 372

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
              I+WN+L++ + Q+GL  +AI+ F+ M +   + PN  T++S+L   SH G + +G+ 
Sbjct: 373 PTEIAWNSLVSVFGQHGLGKDAIKFFERMVD-RGVKPNAITFISLLTGCSHAGLVEEGLD 431

Query: 470 IHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCH 524
               + K    + V       +C++D+ G+ GR+ +A     ++P   ++  W + +   
Sbjct: 432 YFYSMDKT---YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 488

Query: 525 GIHG 528
            IHG
Sbjct: 489 RIHG 492



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 7/391 (1%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D   +A ++   A++  +  G  +H  ++  G     F++N+L+NMY+K G + HAL++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M +R++VSW ++I+   Q++    A   F  M+  G  P      S     A L    
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             + +H   ++ G    ++ +G+ + DMY+K G +  AC VFE +P KD +SW  +I GY
Sbjct: 124 MGKQMHCLALKFG-IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           ++ G   EA+  F+ M +  E+  +Q    S L A   + A + G  +H+ V+K     D
Sbjct: 183 SKIGEFEEALLAFKKMID-EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 483 VFVATCLVDMYGKCGRIDDAMSLF-YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +FV   L DMY K G ++ A ++F       + V +  +I  +    Q +K L+ F ++ 
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            +G+ P+  TF SL+ AC++   + +G Q +  +M+  F   P +     +VD++G+ G 
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGL 359

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           L  A      +   P    W +L+     HG
Sbjct: 360 LEHAIQAFDEIG-DPTEIAWNSLVSVFGQHG 389


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 266/621 (42%), Positives = 394/621 (63%), Gaps = 9/621 (1%)

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           D  SWN++I+   +SG++ EAL     MR   +     +    +  C+   +I SG   H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
                 G + ++FVS+ LI MY+  G +  A +VFD++ +R++VSW S+I  Y+ + + +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 328 TAHGFFTTM------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            A   F  +        A +  D + +VS+ S  +++     + S+H F+++RG F   V
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG-FDRGV 218

Query: 382 IIGNAVVDMYAKLGIINSACA--VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            +GN ++D YAK G    A A  +F+ +  KD +S+N++++ YAQ+G+++EA +VF+ + 
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLI 278

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           +   +  N  T  ++L A SH GALR G  IH +VI+  L  DV V T ++DMY KCGR+
Sbjct: 279 KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           + A   F ++   +   W A+I+ +G+HG   KAL  F  M+D GVRP++ITFVS+L AC
Sbjct: 339 ETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH+GL   G  +F+ M+  FG++P L+HYGCMVDL GRAG L  A++ IQ M + PD+ I
Sbjct: 399 SHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSII 458

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           W +LL ACRIH N+EL  ++  RLFE+D  N GYY+L+S+IYA+ G+W+ V+ VR   ++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKN 518

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           RGL K PG+S +E+N +V +F  G+  HP+ EKIY+ L  L  K+   GYV + S V  D
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           V+E+EKE  L  HSE+LAIAFGI+++ P S + + KNLRVC DCHN  K IS+I +RE +
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+ RFHHFKDG CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGFCSCGDYW 659



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 240/438 (54%), Gaps = 17/438 (3%)

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
           ++   +V++WNS+I+   R G  +EA+  F      S L P   +FP  +KAC +L+D  
Sbjct: 35  YVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLS-LYPTRSSFPCAIKACSSLLDIF 93

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+ H      G++ D+FV+++L+ MY   G    ARK+FD++P R+  SW +MI GY 
Sbjct: 94  SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153

Query: 221 QSGNAVEALDILDEMRLE------GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
            +GNA++A+ +  ++ +E       + +D + + S++  C+R         IH +++K G
Sbjct: 154 LNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG 213

Query: 275 LEFNLFVSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            +  + V N L++ YAK G   +  A ++FDQ++++D VS+NSI++ Y QS     A   
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDV 273

Query: 333 FTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           F  + ++  +  + +TL ++   V+     R  + +H  ++R G   +DVI+G +++DMY
Sbjct: 274 FRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMY 332

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K G + +A   F+ +  K+V SW  +I GY  +G A++A+E+F  M +   + PN  T+
Sbjct: 333 CKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITF 391

Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           VS+L A SH G    G    +A   +  +   +    C+VD+ G+ G +  A  L  ++ 
Sbjct: 392 VSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMK 451

Query: 511 -RSSSVPWNAIISCHGIH 527
               S+ W+++++   IH
Sbjct: 452 MEPDSIIWSSLLAACRIH 469



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 190/386 (49%), Gaps = 23/386 (5%)

Query: 55  QSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           ++C+ L  +   K+ H    V G    +F S+ L+  Y+  G L  +R  FD I  RN+ 
Sbjct: 84  KACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLT-----SGLRPDFYTFPPVLKACRNLVDG---K 163
           +W SMI  Y   G   +AV  F    +      + +  D      V+ AC  +      +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTE 203

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDSGSWNAMISGYCQ 221
            IH  V+K GF+  V V  +LL  Y + G     VARK+FD +  +D  S+N+++S Y Q
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263

Query: 222 SGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           SG + EA D+   +  E  V+ + IT++++L   + S  +  G  IH  +++ GLE ++ 
Sbjct: 264 SGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  ++I+MY K G +  A   FD+M  ++V SW ++IA Y        A   F  M  +G
Sbjct: 324 VGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383

Query: 341 IQPDLLTLVSLTSIV--AQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKLGI 396
           ++P+ +T VS+ +    A L+D       H F   +G F  +  + +   +VD+  + G 
Sbjct: 384 VRPNYITFVSVLAACSHAGLHDV----GWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGF 439

Query: 397 INSACAVFEGLPVK-DVISWNTLITG 421
           +  A  + + + ++ D I W++L+  
Sbjct: 440 LQKAYDLIQKMKMEPDSIIWSSLLAA 465


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/727 (37%), Positives = 418/727 (57%), Gaps = 65/727 (8%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV---------- 206
           RN    KK+HC ++K     + F+  +L++ Y + G    AR +FD MP           
Sbjct: 19  RNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTML 78

Query: 207 ---------------------RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV-SMDP 244
                                RD  SWN++ISGY   G+ VEA+   + M  +GV +++ 
Sbjct: 79  SAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNR 138

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           IT +++L + +    +  G  IH  IVK G    +FV ++L++MYAK G++  A +VFD+
Sbjct: 139 ITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDE 198

Query: 305 -------------------------------MMERDVVSWNSIIAAYEQSNDPITAHGFF 333
                                          M ERD +SW ++I    Q+     A   F
Sbjct: 199 VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLF 258

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M+Q G+  D  T  S+ +    L   +  + +H  I+R G +  +V +G+A+VDMY K
Sbjct: 259 RDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG-YNHNVFVGSALVDMYCK 317

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
              +  A AVF+ +  K+V+SW  ++ GY QNG + EA+ VF  M+  N I P+  T  S
Sbjct: 318 CRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQR-NGIEPDDFTLGS 376

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           ++ + +++ +L +G + H + + + L   + V+  L+ +YGKCG I+D+  LF ++    
Sbjct: 377 VISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRD 436

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V W A++S +   G+ ++ ++ F +ML +G++PD +TF+++L+ACS +GLV  GQ+YF 
Sbjct: 437 EVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFE 496

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            M ++ GI P   HY CM+DLFGRAG L  A NFI  MP  PD+  W  LL +CR++GN 
Sbjct: 497 SMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNE 556

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           E+G  A++ L E+D +N   Y+L+S+IYA  GKW  V ++R   R++G +K PG+S I+ 
Sbjct: 557 EIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKY 616

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            +KV IF   +++ P  ++IY EL  L  KM   GYVPD S VL DVE+ EK  +L  HS
Sbjct: 617 KSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHS 676

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LAIAFG++  P   PI++ KNLRVCGDCHN TK+IS+I++REI+VRD+ RFH FKDG 
Sbjct: 677 EKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGT 736

Query: 814 CSCGDYW 820
           CSCGD+W
Sbjct: 737 CSCGDFW 743



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 209/435 (48%), Gaps = 67/435 (15%)

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           +C  + N      +H  I+K       F+ NNLIN Y+K G + +A  VFD+M + +  S
Sbjct: 14  LCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFS 73

Query: 313 WNSIIAAYEQSNDPITAHGFFTT--------------------------------MQQAG 340
           WN++++AY +S D  T    F+                                 M+   
Sbjct: 74  WNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGV 133

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           +  + +T  ++  +V+        R +HG I++ G F   V +G+++VDMYAK+G+++ A
Sbjct: 134 LNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFG-FGAYVFVGSSLVDMYAKMGLVSVA 192

Query: 401 CAVFE-------------------------------GLPVKDVISWNTLITGYAQNGLAS 429
             VF+                               G+  +D ISW T+ITG  QNGL +
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA+++F+ M +   +  +Q T+ S+L A   + AL++G +IH  +I++    +VFV + L
Sbjct: 253 EAMDLFRDMRQ-EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KC  +  A ++F ++   + V W A++  +G +G  ++A+  F  M   G+ PD 
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
            T  S++++C++   + EG + FH      G+   +     ++ L+G+ G +  ++    
Sbjct: 372 FTLGSVISSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430

Query: 610 NMPVRPDASIWGALL 624
            M  R + S W AL+
Sbjct: 431 EMSFRDEVS-WTALV 444



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 214/467 (45%), Gaps = 68/467 (14%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           Q C  L   +++H  +V  G    VF  + LV+ YA +G +S +   FD +  RNV  +N
Sbjct: 151 QGCVDLG--RQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYN 208

Query: 115 SMISVYVRCGRL-------------------------------SEAVDCFYQFTLTSGLR 143
           +MI+  +R G +                               +EA+D F       G+ 
Sbjct: 209 TMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR-QEGMA 267

Query: 144 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
            D YTF  VL AC   R L +GK+IH  +++ G+  +VFV ++L+ MYC+      A  +
Sbjct: 268 MDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAV 327

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  M  ++  SW AM+ GY Q+G + EA+ +  +M+  G+  D  T+ S++  CA   ++
Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASL 387

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G   H   +  GL   + VSN LI +Y K G +  + ++FD+M  RD VSW ++++ Y
Sbjct: 388 EEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGY 447

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q          F  M   G++PD +T +++ S  ++           G + R   + E 
Sbjct: 448 AQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSR----------AGLVERGQQYFES 497

Query: 381 VIIGNAV----------VDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNG 426
           ++  + +          +D++ + G +  A      +P   D I W TL++    Y    
Sbjct: 498 MLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEE 557

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPA----YSHVGALRQGIK 469
           +   A E    + E +  NP     +S + A    +S+V  LR+G++
Sbjct: 558 IGKWAAES---LLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMR 601


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/736 (37%), Positives = 430/736 (58%), Gaps = 15/736 (2%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  SC ++  ++    +H   +  G    ++    L++ Y+   DL  +R+ F+ +S
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            R+  +WNS+IS Y   G   +A+D +++F +T G+ PD +T   VL AC +L+   +G 
Sbjct: 184 NRDSVSWNSLISGYCSNGFWEDALDMYHKFRMT-GMVPDCFTMSSVLLACGSLMAVKEGV 242

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  + K+G   DV +   LL MY +F     AR++F  M V+DS +WN MI GY Q G
Sbjct: 243 AVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLG 302

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               ++ +  +M ++G   D +++ S +  C +S ++  G  +H Y++  G E +    N
Sbjct: 303 RHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACN 361

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G +  A  VFD    +D V+WNS+I  Y QS         F  M+    +P
Sbjct: 362 ILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KP 420

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T V L SI +QL D    R +H  +++ G F  ++IIGN+++D+YAK G ++    V
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFG-FEAELIIGNSLLDVYAKCGEMDDLLKV 479

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE--INPNQGTYVSILPAYSHV 461
           F  +   D+ISWNT+I   A +    +    FQM+ E     + P++ T + ILP  S +
Sbjct: 480 FSYMSAHDIISWNTVI---ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLL 536

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
              RQG +IH  + K+    +V +   L++MY KCG +++ + +F  +     V W A+I
Sbjct: 537 AVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALI 596

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S  G++G+G KAL  F+ M   GV PD + F++ + ACSHSG+V EG R+F  M+ ++ +
Sbjct: 597 SAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNL 656

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P ++HY C+VDL  R+G L  A  FI +MP++PDAS+WGALL ACR  GN  +    S 
Sbjct: 657 EPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSK 716

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           ++ E++S++ GYYVL+SNIYA +GKW+ V  VR+  + +GLKK PG S IE+  +V +F 
Sbjct: 717 KILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFR 776

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
           TG+++  +Y+K+ D L  L   M   GYV D  F L DVEED+K  +L  HSERLAIAFG
Sbjct: 777 TGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFG 836

Query: 762 IISSPPKSPIQIFKNL 777
           ++++ P SP+ IF  L
Sbjct: 837 LLNTKPGSPLLIFPTL 852



 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 186/604 (30%), Positives = 310/604 (51%), Gaps = 21/604 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYT 112
             S      ++ +H+L++ SG   +V  S KL++ YA + D   S   F  IS   NVY 
Sbjct: 29  LSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYL 88

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WNS+I      G  ++A+  +Y       L+PD +TFP V+ +C  ++D   G  +H   
Sbjct: 89  WNSIIRALTHNGLFTQALG-YYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHA 147

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +++GFE D+++  +L+ MY RF   + AR +F++M  RDS SWN++ISGYC +G   +AL
Sbjct: 148 MEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDAL 207

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+  + R+ G+  D  T++S+L  C     +  G+ +H  I K G+  ++ + N L++MY
Sbjct: 208 DMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMY 267

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            KF  +R A RVF +M  +D V+WN++I  Y Q      +   F  M   G  PD+L++ 
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSIT 326

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S      Q  D +  + VH +++  G F  D +  N ++DMYAK G + +A  VF+    
Sbjct: 327 STIRACGQSGDLQVGKFVHKYLIGSG-FECDTVACNILIDMYAKCGDLLAAQEVFDTTKC 385

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD ++WN+LI GY Q+G   E +E F+MM+   E  P+  T+V +L  +S +  + QG  
Sbjct: 386 KDSVTWNSLINGYTQSGYYKEGLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRG 443

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH  VIK     ++ +   L+D+Y KCG +DD + +F  +     + WN +I+       
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
                    +M  EG+ PD  T + +L  CS   +  +G+   H    + G + ++    
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKE-IHGYIFKSGFESNVPIGN 562

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG----------NMELGAVA 639
            +++++ + G L       + M  + D   W AL+ A  ++G          +MEL  V 
Sbjct: 563 ALIEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFGMYGEGKKALKAFQDMELSGVL 621

Query: 640 SDRL 643
            D +
Sbjct: 622 PDSV 625


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 283/737 (38%), Positives = 427/737 (57%), Gaps = 9/737 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++     G+   +   F  +  R+V++WN M+  Y + G L EA+D  Y   + +G+RP
Sbjct: 135 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALD-LYHRMMWAGVRP 193

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL++C  + D   G+++H  VL+ GF  +V V  +L+ MY + G    ARK+F
Sbjct: 194 DVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVF 253

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D M V D  SWNAMI+G+ ++G     L++   M  + V  + +T+ S+        +I 
Sbjct: 254 DSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDIT 313

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
               +H   VK G   ++   N+LI MYA  GMM  A  VF +M  RD +SW ++I+ YE
Sbjct: 314 FAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYE 373

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +  M+   + PD +T+ S  +  A L        +H     +G FM  V
Sbjct: 374 KNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG-FMSYV 432

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++ NA+++MYAK   I+ A  VF+ +P KDV+SW+++I G+  N    EA+  F+ M   
Sbjct: 433 VVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--L 490

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            ++ PN  T+++ L A +  GALR G +IHA V++  + ++ ++   L+D+Y KCG+   
Sbjct: 491 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGY 550

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F        V WN +I+    HG G+ AL+FF QM+  G  PD +TFV+LL ACS 
Sbjct: 551 AWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSR 610

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            G+VSEG   FH M +++ I P+LKHY CMVDL  R G L  A+NFI  MP+ PDA++WG
Sbjct: 611 GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWG 670

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL  CRIH ++ELG +A+  + E++  + GY+VL+ ++YA+ G W+ +  VR   R++G
Sbjct: 671 ALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKG 730

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L    G S +EV   V  F T + +HP+  +I   L  +  +MK+ G  P +S   +D  
Sbjct: 731 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVESHSPED-- 788

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           +  K+ I   HSERLA+AFG+I++ P + I + KN   C  CH   K IS I  R+IIVR
Sbjct: 789 KVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIVR 848

Query: 802 DSNRFHHFKDGICSCGD 818
           DS + HHFKDG CSCGD
Sbjct: 849 DSKQVHHFKDGSCSCGD 865



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/453 (32%), Positives = 243/453 (53%), Gaps = 7/453 (1%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           ++L M  RFG    A ++F  MP RD  SWN M+ GY ++G   EALD+   M   GV  
Sbjct: 134 AMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRP 193

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T   +L  C    +   G  +H ++++ G    + V N L+ MYAK G +  A +VF
Sbjct: 194 DVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVF 253

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M   D +SWN++IA + ++ +       F TM Q  +QP+L+T+ S+T     L+D  
Sbjct: 254 DSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDIT 313

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +HG  ++RG F  DV   N+++ MYA LG++  A  VF  +  +D +SW  +I+GY
Sbjct: 314 FAKEMHGLAVKRG-FATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGY 372

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+EV+ +M E N ++P+  T  S L A + +G+L  G+K+H           
Sbjct: 373 EKNGFPDKALEVYALM-EVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSY 431

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V V   L++MY K  RID A+ +F  +P    V W+++I+    + +  +AL +FR ML 
Sbjct: 432 VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 491

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           + V+P+ +TF++ L AC+ +G +  G+  + H+++     + +L +   ++DL+ + G  
Sbjct: 492 D-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPN--ALIDLYVKCGQT 548

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           G A         + D   W  ++     HGN E
Sbjct: 549 GYAWAQFCAHGAK-DVVSWNIMIAGFVAHGNGE 580



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 242/469 (51%), Gaps = 9/469 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HA ++  G  + V     L+  YA  GD+  +R  FD ++  +  +WN+MI+ +   
Sbjct: 215 REVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFEN 274

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G  +  ++ F    L   ++P+  T   V  A   L D    K++H   +K GF  DV  
Sbjct: 275 GECNAGLELFLTM-LQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAF 333

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY   G+   AR +F  M  RD+ SW AMISGY ++G   +AL++   M +  V
Sbjct: 334 CNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNV 393

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D IT+AS L  CA   ++  G+ +H      G    + V+N L+ MYAK   +  A+ 
Sbjct: 394 SPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIE 453

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M E+DVVSW+S+IA +  ++    A  +F  M  A ++P+ +T ++  +  A    
Sbjct: 454 VFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGA 512

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R+ + +H  ++R G   E   + NA++D+Y K G    A A F     KDV+SWN +I 
Sbjct: 513 LRSGKEIHAHVLRCGIAYEG-YLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIA 571

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCL 479
           G+  +G    A+  F  M +  E  P++ T+V++L A S  G + +G ++ H+   K  +
Sbjct: 572 GFVAHGNGETALSFFNQMVKIGEC-PDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSI 630

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIH 527
             ++    C+VD+  + G++ +A +   ++P +  +  W A+++   IH
Sbjct: 631 VPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 679



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 8/420 (1%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           +   C  G   +AL +L+         D     ++  +C     +  GL    +      
Sbjct: 69  LRALCSHGQLAQALWLLES---SAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHA 125

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
            F L + N +++M  +FG   HA RVF +M ERDV SWN ++  Y ++     A   +  
Sbjct: 126 WFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHR 185

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M  AG++PD+ T   +      + D R  R VH  ++R G F E+V + NA++ MYAK G
Sbjct: 186 MMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG-FAEEVDVLNALMTMYAKCG 244

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            + +A  VF+ + V D ISWN +I G+ +NG  +  +E+F  M + +E+ PN  T  S+ 
Sbjct: 245 DVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQ-DEVQPNLMTITSVT 303

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A   +  +    ++H   +K     DV     L+ MY   G +  A ++F ++    ++
Sbjct: 304 VASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAM 363

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A+IS +  +G  DKAL  +  M    V PD IT  S L AC+  G +  G +  H +
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK-LHEL 422

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACRIHGNME 634
            E  G   ++     +++++ ++  +  A    + MP + D   W +++ G C  H N E
Sbjct: 423 AESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEK-DVVSWSSMIAGFCFNHRNFE 481


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/671 (39%), Positives = 413/671 (61%), Gaps = 4/671 (0%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 209
           +L+ C+ + D  +IH  ++K        VA +LL         ++  A  +F  +   DS
Sbjct: 30  ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDS 89

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            ++N MI G+    +  EA+ +  EM    V  D  T   IL VC+R   +  G  IH  
Sbjct: 90  PAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHAL 149

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           I+K G   + FV N LI+MYA  G +  A RVFD+M ER+V +WNS+ A Y +S +    
Sbjct: 150 IMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEV 209

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M +  I+ D +TLVS+ +   +L D      ++ ++  +G      +I  ++VD
Sbjct: 210 VKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI-TSLVD 268

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYAK G +++A  +F+ +  +DV++W+ +I+GY+Q     EA+++F  M++ N I+PN+ 
Sbjct: 269 MYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKAN-IDPNEI 327

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T VSIL + + +GAL  G  +H  + K  +   V + T L+D Y KCG ++ ++ +F ++
Sbjct: 328 TMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKM 387

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
           P  + + W  +I     +GQG KAL +F  ML++ V P+ +TF+ +L+ACSH+GLV EG+
Sbjct: 388 PVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGR 447

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
             F  M  +FGI+P ++HYGCMVD+ GRAG +  A  FI+NMP++P+A IW  LL +C++
Sbjct: 448 DLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKV 507

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
           H N+E+G  +  +L  ++  + G Y+L+SNIYA+VG+WE   +VR   +++G+KKTPG S
Sbjct: 508 HKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCS 567

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
            IE++  +  F+  +  H + E+IY+ + ++  ++KS GYVP+ +    D EED+KE  +
Sbjct: 568 LIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSV 627

Query: 750 TSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
           + HSE+LAIAFG+I SPP + I+I KNLRVC DCHN TK +S++  REI+VRD  RFHHF
Sbjct: 628 SHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHF 687

Query: 810 KDGICSCGDYW 820
           K+G CSC DYW
Sbjct: 688 KEGSCSCNDYW 698



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/535 (30%), Positives = 278/535 (51%), Gaps = 27/535 (5%)

Query: 17  LPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKI 76
           LPLL A  P    + +    +P  L           + + C  +  +  +HA L+ +  +
Sbjct: 5   LPLLPAKTPTAKTSISLFPENPKTL-----------ILEQCKTIRDLNEIHAHLIKTRLL 53

Query: 77  KTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
                +  L+   A L    + ++   F  I   +   +N MI  +       EA+  F 
Sbjct: 54  LKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFK 113

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +    S ++PD +TFP +LK C   + L +G++IH  ++K GF    FV  +L+HMY   
Sbjct: 114 EMHENS-VQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANC 172

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G   VAR++FD+M  R+  +WN+M +GY +SGN  E + +  EM    +  D +T+ S+L
Sbjct: 173 GEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVL 232

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C R  ++  G  I+ Y+ + GL+ N  +  +L++MYAK G +  A R+FDQM  RDVV
Sbjct: 233 TACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVV 292

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +W+++I+ Y Q++    A   F  MQ+A I P+ +T+VS+ S  A L      + VH FI
Sbjct: 293 AWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFI 352

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
            ++   +  V +G A++D YAK G + S+  VF  +PVK+V+SW  LI G A NG   +A
Sbjct: 353 KKKRMKL-TVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKA 411

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT---- 487
           +E F +M E N + PN  T++ +L A SH G + +G  +   + ++   F +        
Sbjct: 412 LEYFYLMLEKN-VEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRD---FGIEPRIEHYG 467

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           C+VD+ G+ G I++A      +P + ++V W  +++   +H   +      +Q++
Sbjct: 468 CMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLI 522



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 220/440 (50%), Gaps = 20/440 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  + + C++L  +   +++HAL++  G     F    L++ YAN G++  +R  FD
Sbjct: 124 EFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFD 183

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +S RNV TWNSM + Y + G   E V  F++  L   +R D  T   VL AC  L D  
Sbjct: 184 EMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEM-LELDIRFDEVTLVSVLTACGRLADLE 242

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+ I+  V + G + +  +  SL+ MY + G  + AR+LFD M  RD  +W+AMISGY 
Sbjct: 243 LGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYS 302

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+    EALD+  EM+   +  + IT+ SIL  CA    + +G  +H +I K  ++  + 
Sbjct: 303 QASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVT 362

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +   L++ YAK G +  ++ VF +M  ++V+SW  +I     +     A  +F  M +  
Sbjct: 363 LGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKN 422

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-MRRGWFMEDVIIG-NAVVDMYAKLGIIN 398
           ++P+ +T + + S  +        R +  F+ M R + +E  I     +VD+  + G+I 
Sbjct: 423 VEPNDVTFIGVLSACSHAGLVDEGRDL--FVSMSRDFGIEPRIEHYGCMVDILGRAGLIE 480

Query: 399 SACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
            A    + +P++ + + W TL+     +    +  E+++   ++E       + G Y+ +
Sbjct: 481 EAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPT-----HSGDYILL 535

Query: 455 LPAYSHVGALRQGIKIHARV 474
              Y+ VG     +K+   +
Sbjct: 536 SNIYASVGRWEDALKVRGEM 555


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/747 (38%), Positives = 422/747 (56%), Gaps = 19/747 (2%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            YA+      ++  FD +  RN+Y+W  +++ +   G+  E +    +     G+RPD  
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR-QDGVRPDAV 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           TF   L +C    +L DG +IH  V+    E D  V+ +LL+MY + G  + A+++F  M
Sbjct: 60  TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119

Query: 205 P-VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
              R+  SW+ M   +   GN  EAL     M L G+      + +IL  C+    +  G
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAAYE 321
            +IH  I   G E  L V+N ++ MY + G +  A +VFD M E  RDVVSWN +++ Y 
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            ++    A   +  MQ   ++PD +T VSL S  +   D    R +H  I+      ++V
Sbjct: 240 HNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNV 295

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           I+GNA+V MYAK G    A AVF+ +  + +ISW T+I+ Y +  L +EA  +FQ M E 
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 442 NE------INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
            +      + P+   +V+IL A + V AL QG  +  +     L  D  V T +V++YGK
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 415

Query: 496 CGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           CG I++A  +F  V     V  WNA+I+ +   GQ  +AL  F +M  EGVRPD  +FVS
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 475

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEF-GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           +L ACSH+GL  +G+ YF  M  E+  +   ++H+GC+ DL GR G L  A  F++ +PV
Sbjct: 476 ILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPV 535

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
           +PDA  W +LL ACR H +++     +++L  ++      YV +SNIYA + KW  V +V
Sbjct: 536 KPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKV 595

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R    ++G+KK  G S+IE+   +  F TG+  HP+  +I +EL  L ++MK  GYVPD 
Sbjct: 596 RKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDT 655

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
             VL  V+E EKE +L SHSERLAIA G+IS+P  +P+++ KNLRVC DCH  TK IS+I
Sbjct: 656 KMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKI 715

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
             R+I+VRD  RFH FKDG CSC DYW
Sbjct: 716 AGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 47/387 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYV 121
           + +H+ + +SG    +  +  ++  Y   G +  +R  FD +  + R+V +WN M+S YV
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
              R  +A+  + +      LRPD  T+  +L AC +  D   G+ +H  ++    E +V
Sbjct: 240 HNDRGKDAIQLYQRMQ----LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV 295

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RL 237
            V  +L+ MY + G    AR +FD M  R   SW  +IS Y +     EA  +  +M  L
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 238 EG------VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           E       V  D +   +IL  CA    +  G ++       GL  +  V   ++N+Y K
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 415

Query: 292 FGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
            G +  A R+FD +  R DV  WN++IA Y Q      A   F  M+  G++PD  + VS
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 475

Query: 351 L--------------TSIVAQLNDCRN-SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           +              +   +   + RN +R++  F                V D+  + G
Sbjct: 476 ILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHF--------------GCVADLLGRGG 521

Query: 396 IINSACAVFEGLPVK-DVISWNTLITG 421
            +  A    E LPVK D ++W +L+  
Sbjct: 522 RLKEAEEFLEKLPVKPDAVAWTSLLAA 548



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 160/362 (44%), Gaps = 32/362 (8%)

Query: 34  LQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYA 90
           +Q+ PD       ++ +  L  +C+    V   + LH  +V     K V     LV+ YA
Sbjct: 254 MQLRPD-------KVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 306

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT------LTSGLRP 144
             G  + +R  FD +  R++ +W ++IS YVR   ++EA   F Q         +  ++P
Sbjct: 307 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 366

Query: 145 DFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D   F  +L AC +   L  GK +       G   D  V  +++++Y + G    AR++F
Sbjct: 367 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIF 426

Query: 202 DDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           D +  R D   WNAMI+ Y Q G + EAL +   M +EGV  D  +  SIL  C+ +   
Sbjct: 427 DAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 486

Query: 261 LSGLLIHLYIVKHGLEFNLFVSN-----NLINMYAKFGMMRHALRVFDQM-MERDVVSWN 314
             G     Y      E+            + ++  + G ++ A    +++ ++ D V+W 
Sbjct: 487 DQG---KSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWT 543

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT-LVSLTSIVAQLNDCRNSRSVHGFIMR 373
           S++AA     D   A      + +  ++P   T  V+L++I A+L        V  F+  
Sbjct: 544 SLLAACRNHRDLKRAKEVANKLLR--LEPRCATGYVALSNIYAELQKWHAVAKVRKFMAE 601

Query: 374 RG 375
           +G
Sbjct: 602 QG 603


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/737 (37%), Positives = 428/737 (58%), Gaps = 10/737 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++     G++  +   F  +  R+V++WN M+  Y + G L EA+D +Y+  L +G+RP
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM-LWAGMRP 195

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL+ C  + D   G+++H  VL+ GF  +V V  +L+ MY + G    ARK+F
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D M V D  SWNAMI+G+ ++      L++   M    V  + +T+ S+         + 
Sbjct: 256 DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
               +H + VK G   ++   N+LI MY   G M  A ++F +M  +D +SW ++I+ YE
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYE 375

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +  M+   + PD +T+ S  +  A L        +H     +G F+  V
Sbjct: 376 KNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG-FIRYV 434

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++ NA+++MYAK   I+ A  VF+ +  KDV+SW+++I G+  N  + EA+  F+ M   
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM--L 492

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN  T+++ L A +  GALR G +IHA V++  +  + +V   L+D+Y KCG+   
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F        V WN ++S    HG GD AL+ F QM++ G  PD +TFV+LL ACS 
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +G+V +G   FHMM E+F I P+LKHY CMVDL  R G L  A+N I  MP++PDA++WG
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL  CRIH ++ELG +A+  + E++  +V Y+VL+ ++Y + GKW  V  VR   R++G
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L++  G S +EV      F T + +HP+ ++I   L  +  +MK+ G+ P +S   ++V 
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVS 792

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           ED+   IL  HSERLA+AFG+I++ P + I + KN   C  CH   K IS+I  REI VR
Sbjct: 793 EDD---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVR 849

Query: 802 DSNRFHHFKDGICSCGD 818
           D+ + H FKDG CSCGD
Sbjct: 850 DTKQLHCFKDGDCSCGD 866



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 236/457 (51%), Gaps = 8/457 (1%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           ++L M  RFG    A ++F  MP RD  SWN M+ GY + G   EALD+   M   G+  
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRP 195

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T   +L  C    +   G  +H ++++ G    + V N L+ MYAK G +  A +VF
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M   D +SWN++IA + ++++       F TM +  +QP+L+T+ S+T     L++  
Sbjct: 256 DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +HGF ++RG F  DV   N+++ MY  LG +  A  +F  +  KD +SW  +I+GY
Sbjct: 316 FAKEMHGFAVKRG-FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+EV+ +ME  N ++P+  T  S L A + +G L  GIK+H           
Sbjct: 375 EKNGFPDKALEVYALMELHN-VSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V VA  L++MY K   ID A+ +F  +     V W+++I+    + +  +AL +FR ML 
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             V+P+ +TF++ L+AC+ +G +  G+   H      GI         ++DL+ + G   
Sbjct: 494 H-VKPNSVTFIAALSACAATGALRSGKE-IHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            A     ++    D   W  +L     HG   LG +A
Sbjct: 552 YAWAQF-SVHSEKDVVSWNIMLSGFVAHG---LGDIA 584



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 243/469 (51%), Gaps = 9/469 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HA ++  G    V     LV  YA  GD+  +R  FD ++  +  +WN+MI+ +   
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFEN 276

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
                 ++ F    L + ++P+  T   V  A   L +    K++H   +K GF  DV  
Sbjct: 277 HECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAF 335

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY   G    A K+F  M  +D+ SW AMISGY ++G   +AL++   M L  V
Sbjct: 336 CNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNV 395

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D +T+AS L  CA    +  G+ +H      G    + V+N L+ MYAK   +  A+ 
Sbjct: 396 SPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIE 455

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M E+DVVSW+S+IA +  ++    A  +F  M    ++P+ +T ++  S  A    
Sbjct: 456 VFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGA 514

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R+ + +H +++R G   E   + NA++D+Y K G  + A A F     KDV+SWN +++
Sbjct: 515 LRSGKEIHAYVLRCGIGSEG-YVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCL 479
           G+  +GL   A+ +F  M E  E +P++ T+V++L A S  G + QG ++ H    K  +
Sbjct: 574 GFVAHGLGDIALSLFNQMVEMGE-HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSI 632

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
             ++    C+VD+  + G++ +A +L  ++P +  +  W A+++   IH
Sbjct: 633 VPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 681



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 202/423 (47%), Gaps = 8/423 (1%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           +A +   C  G   +AL +L+         D     ++  +C     + +G+        
Sbjct: 68  SAALRALCSHGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADA 124

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
               F L + N +++M  +FG + HA RVF +M ERDV SWN ++  Y +      A   
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M  AG++PD+ T   +      + D R  R VH  ++R G F ++V + NA+V MYA
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFG-FGDEVDVLNALVTMYA 243

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G I +A  VF+G+ V D ISWN +I G+ +N      +E+F  M E NE+ PN  T  
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLE-NEVQPNLMTIT 302

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+  A   +  +    ++H   +K     DV     L+ MY   GR+ DA  +F ++   
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
            ++ W A+IS +  +G  DKAL  +  M    V PD +T  S L AC+  G +  G +  
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIK-L 421

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACRIHG 631
           H + +  G   ++     +++++ ++ H+  A    + M  + D   W +++ G C  H 
Sbjct: 422 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHR 480

Query: 632 NME 634
           + E
Sbjct: 481 SFE 483


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/737 (38%), Positives = 427/737 (57%), Gaps = 9/737 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++     G+   +   F  +  R+V++WN M+  Y + G L EA+D  Y   + +G+RP
Sbjct: 129 MLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALD-LYHRMMWAGVRP 187

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL++C  + D   G+++H  VL+ GF  +V V  +L+ MY + G    ARK+F
Sbjct: 188 DVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVF 247

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D M V D  SWNAMI+G+ ++G     L++   M  + V  + +T+ S+        ++ 
Sbjct: 248 DSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVT 307

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
               +H   VK G   ++   N+LI MYA  GMMR A  VF +M  RD ++W ++I+ YE
Sbjct: 308 FAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYE 367

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +  M+   + PD +T+ S  +  A L        +H     +G F+  +
Sbjct: 368 KNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG-FISYI 426

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++ NA+++MYAK   I+ A  VF+ +  KDV+SW+++I G+  N    EA+  F+ M   
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM--L 484

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            ++ PN  T+++ L A +  GALR G +IHA V++  + ++ ++   L+D+Y KCG+   
Sbjct: 485 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F        V WN +I+    HG GD AL+FF QM+  G  PD +TFV+LL ACS 
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            G+VSEG   FH M E++ I P+LKHY CMVDL  RAG L  A+NFI  MP+ PDA++WG
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWG 664

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL  CRIH ++ELG +A+  +  ++  + GY+VL+ ++YA+   W+ +  VR   R++G
Sbjct: 665 ALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKG 724

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L    G S +EV   V  F T + +HP+  +I   L  +  +MK+ GY P +S   +D  
Sbjct: 725 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHCPED-- 782

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E  K+ I   HSERLA+AFG+I++ P + I + KN   C  CH   K IS I  R+IIVR
Sbjct: 783 EVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVR 842

Query: 802 DSNRFHHFKDGICSCGD 818
           DS + HHFKDG CSCGD
Sbjct: 843 DSKQLHHFKDGSCSCGD 859



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 227/422 (53%), Gaps = 4/422 (0%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           ++L M  RFG    A ++F  MP RD  SWN M+ GY +SG   EALD+   M   GV  
Sbjct: 128 AMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRP 187

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T   +L  C    +   G  +H ++++ G    + V N L+ MYAK G +  A +VF
Sbjct: 188 DVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVF 247

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M   D +SWN++IA + ++ +       F TM    +QP+L+T+ S+T     L+D  
Sbjct: 248 DSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVT 307

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +HG  ++RG F  DV   N+++ MYA LG++  A  VF  +  +D ++W  +I+GY
Sbjct: 308 FAKEMHGLAVKRG-FAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+EV+ +M E N ++P+  T  S L A + +G+L  G+K+H           
Sbjct: 367 EKNGFPDKALEVYALM-EVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISY 425

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           + V   +++MY K  RID A+ +F  +     V W+++I+    + +  +AL +FR ML 
Sbjct: 426 IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 485

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           + V+P+ +TF++ L AC+ +G +  G+   H      GI+        ++DL+ + G  G
Sbjct: 486 D-VKPNSVTFIAALAACAATGALRSGKE-IHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543

Query: 603 MA 604
            A
Sbjct: 544 YA 545



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 241/469 (51%), Gaps = 9/469 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HA ++  G  + V     L+  YA  GD+  +R  FD ++  +  +WN+MI+ +   
Sbjct: 209 REVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFEN 268

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G  +  ++ F    L   ++P+  T   V  A   L D    K++H   +K GF  DV  
Sbjct: 269 GECNAGLELFLTM-LHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAF 327

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY   G+   AR +F  M  RD+ +W AMISGY ++G   +AL++   M +  V
Sbjct: 328 CNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNV 387

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D IT+AS L  CA   ++  G+ +H      G    + V+N ++ MYAK   +  A+ 
Sbjct: 388 SPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIE 447

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M E+DVVSW+S+IA +  ++    A  +F  M  A ++P+ +T ++  +  A    
Sbjct: 448 VFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGA 506

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R+ + +H  ++R G   E   + NA++D+Y K G    A A F     KDV+SWN +I 
Sbjct: 507 LRSGKEIHAHVLRCGIEYEG-YLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIA 565

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCL 479
           G+  +G    A+  F  M +  E  P++ T+V++L A S  G + +G ++ H+   K  +
Sbjct: 566 GFVAHGHGDTALSFFNQMVKIGEC-PDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSI 624

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
             ++    C+VD+  + G++ +A +   ++P    +  W A+++   IH
Sbjct: 625 VPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 673



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 198/420 (47%), Gaps = 8/420 (1%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           +   C  G   +AL +L+         D     ++  +C     +  GL    +      
Sbjct: 63  LRALCSHGQLAQALWLLES---SAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHA 119

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
            F L + N +++M  +FG   HA RVF +M ERDV SWN ++  Y +S     A   +  
Sbjct: 120 WFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHR 179

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M  AG++PD+ T   +      + D R  R VH  ++R G F E+V + NA++ MYAK G
Sbjct: 180 MMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG-FGEEVDVLNALMTMYAKCG 238

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            + +A  VF+ + V D ISWN +I G+ +NG  +  +E+F  M   +E+ PN  T  S+ 
Sbjct: 239 DVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLH-DEVQPNLMTITSVT 297

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A   +  +    ++H   +K     DV     L+ MY   G +  A ++F ++    ++
Sbjct: 298 VASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAM 357

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A+IS +  +G  DKAL  +  M    V PD IT  S L AC+  G +  G +  H +
Sbjct: 358 TWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK-LHEL 416

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACRIHGNME 634
            E  G   ++     +++++ ++  +  A    + M  + D   W +++ G C  H N E
Sbjct: 417 AESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEK-DVVSWSSMIAGFCFNHRNFE 475


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/739 (36%), Positives = 428/739 (57%), Gaps = 10/739 (1%)

Query: 83   TKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
            +KLV  Y   GD+  +R  FD + S  NV+ WN ++  Y +     E++  F Q     G
Sbjct: 347  SKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMH-ELG 405

Query: 142  LRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
            + PD +    +LK    L    DG   H  ++KLGF     V  +L+  Y +  + + A 
Sbjct: 406  ITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAV 465

Query: 199  KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
             +FD MP +D+ SWN++ISG   +G   EA+++   M ++G  +D  T+ S+LP CARS 
Sbjct: 466  LVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSH 525

Query: 259  NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
                G ++H Y VK GL     ++N L++MY+         ++F  M +++VVSW ++I 
Sbjct: 526  YWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMIT 585

Query: 319  AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            +Y ++       G    M   GI+PD+  + S+    A     +  +SVHG+ +R G  M
Sbjct: 586  SYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNG--M 643

Query: 379  EDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
            E ++ + NA+++MY     +  A  VF+ +  KD+ISWNTLI GY++N  A+E+  +F  
Sbjct: 644  EKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSD 703

Query: 438  MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
            M    +  PN  T   ILPA + + +L +G +IHA  ++     D + +  LVDMY KCG
Sbjct: 704  M--LLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCG 761

Query: 498  RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
             +  A  LF ++ + + + W  +I+ +G+HG G  A+  F QM   GV PD  +F ++L 
Sbjct: 762  ALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILY 821

Query: 558  ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
            AC HSGL +EG ++F+ M++E+ I+P LKHY C+VDL    G+L  A  FI++MP+ PD+
Sbjct: 822  ACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDS 881

Query: 618  SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            SIW +LL  CRIH +++L    +DR+F+++ EN GYYVL++NIYA   +WE V ++++  
Sbjct: 882  SIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKI 941

Query: 678  RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
              RGL++  G S IEV  KV +F   NR HP++ +I + L ++  +M+  G+ P K + L
Sbjct: 942  GGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSL 1001

Query: 738  QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
                +   +  L  HS +LA+ FG++  P   PI++ KN +VC  CH   KFIS++  RE
Sbjct: 1002 MGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNRE 1061

Query: 798  IIVRDSNRFHHFKDGICSC 816
            II+RDS+RFHHF+ G CSC
Sbjct: 1062 IILRDSSRFHHFEGGRCSC 1080



 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 189/641 (29%), Positives = 309/641 (48%), Gaps = 25/641 (3%)

Query: 60  LHHVKRLHALLVV-SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR--NVYTWNSM 116
           L   +R HAL+   +G I       +LV  Y   GDL  +R  FD +  R  +V  W S+
Sbjct: 110 LEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSL 169

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLG 173
           +S Y + G   E V  F Q     G+ PD +    VLK   +L    +G+ IH  + KLG
Sbjct: 170 MSAYAKAGDFQEGVSLFRQMQ-CCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLG 228

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
                 VA +L+ +Y R G    A ++FD M  RD+ SWN+ ISGY  +G    A+D+  
Sbjct: 229 LGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFS 288

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL---------FVSNN 284
           +M  EG  +  +TV S+LP CA     L G ++H Y +K GL ++L          + + 
Sbjct: 289 KMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSK 348

Query: 285 LINMYAKFGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           L+ MY K G M  A RVFD M  + +V  WN I+  Y ++ +   +   F  M + GI P
Sbjct: 349 LVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITP 408

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D   L  L   +  L+  R+    HG++++ G F     + NA++  YAK  +I++A  V
Sbjct: 409 DEHALSCLLKCITCLSCARDGLVAHGYLVKLG-FGTQCAVCNALISFYAKSNMIDNAVLV 467

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVG 462
           F+ +P +D ISWN++I+G   NGL SEAIE+F +M  + +E++    T +S+LPA +   
Sbjct: 468 FDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDST--TLLSVLPACARSH 525

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
               G  +H   +K  L  +  +A  L+DMY  C        +F  + + + V W A+I+
Sbjct: 526 YWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMIT 585

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +   G  DK     ++M+ +G++PD     S+L   +    + +G +  H      G++
Sbjct: 586 SYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQG-KSVHGYAIRNGME 644

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA-CRIHGNMELGAVASD 641
             L     +++++    ++  A   + +     D   W  L+G   R +   E  ++ SD
Sbjct: 645 KLLPVANALMEMYVNCRNMEEA-RLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSD 703

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
            L +     V    ++  + A++   E   E+ + A  RG 
Sbjct: 704 MLLQFKPNTVTMTCILPAV-ASISSLERGREIHAYALRRGF 743



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 7/269 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     L   K +H   + +G  K +  +  L+  Y N  ++  +R  FDH++ +++ +W
Sbjct: 622 FAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISW 681

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGKKIHCSVL 170
           N++I  Y R    +E+   F    L    +P+  T     P + +  +L  G++IH   L
Sbjct: 682 NTLIGGYSRNNFANESFSLFSDMLLQ--FKPNTVTMTCILPAVASISSLERGREIHAYAL 739

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           + GF  D + + +L+ MY + G   VAR LFD +  ++  SW  MI+GY   G   +A+ 
Sbjct: 740 RRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVA 799

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMY 289
           + ++MR  GV  D  + ++IL  C  S     G      + K + +E  L     ++++ 
Sbjct: 800 LFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLL 859

Query: 290 AKFGMMRHALRVFDQM-MERDVVSWNSII 317
           +  G ++ A    + M +E D   W S++
Sbjct: 860 SHTGNLKEAFEFIESMPIEPDSSIWVSLL 888



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 16/173 (9%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S + L   + +HA  +  G ++  ++S  LV+ Y   G L  +R  FD ++ +N+ +W  
Sbjct: 724 SISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTI 783

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           MI+ Y   G   +AV  F Q    SG+ PD  +F  +L AC +     +G K   ++ K 
Sbjct: 784 MIAGYGMHGCGKDAVALFEQMR-GSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRK- 841

Query: 173 GFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISG 218
               +  +   L H  C        G    A +  + MP+  DS  W +++ G
Sbjct: 842 ----EYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHG 890


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/662 (41%), Positives = 394/662 (59%), Gaps = 12/662 (1%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           + +H   +  GF  D FVA++L  +Y      N ARK+FD +P  D+  WN +++G   S
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202

Query: 223 GNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
               EAL+    M   G V  D  T+AS+LP  A   N   G  +H +  K GL  +  V
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
              LI++YAK G M  A  +FD+M   D+V++N++I+ Y  +    ++   F  +   G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P   TLV+L  + +       +  +H  +++ G    +  +  A+  +Y +   ++SA 
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG-LDANAPVSTALTTLYCRFNDMDSAR 377

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F+ +P K + SWN +I+GYAQNGL   A+ +FQ M+  N + PN  T  S L A + +
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALN-VRPNPLTISSALSACAQL 436

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL  G  +H  +    L  +V+V T L+DMY KCG I +A  +F  +   + V WN +I
Sbjct: 437 GALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMI 496

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +G+HGQG +AL  ++ M+D  + P   TF+S+L ACSH GLV EG   F  M  ++GI
Sbjct: 497 SGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGI 556

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP---VRPDASIWGALLGACRIHGNMELGAV 638
            P ++H  CMVDL GRAG L  A   I   P   V P   IWGALLGAC +H + +L  +
Sbjct: 557 TPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGP--GIWGALLGACMVHKDGDLAKL 614

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           AS +LFE++ EN GYYVL+SN+Y +  ++     VR  A+ R L KTPG + IE+ ++  
Sbjct: 615 ASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPH 674

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
           +F  G+R HP+ + IY  L  LTAKM   GY PD    L DVEE+EKEH++  HSE+LAI
Sbjct: 675 VFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAI 734

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG++++ P + I+I KNLRVC DCHN TK IS++T+R I+VRD++RFHHF+DG+CSCGD
Sbjct: 735 AFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGD 794

Query: 819 YW 820
           YW
Sbjct: 795 YW 796



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 277/551 (50%), Gaps = 23/551 (4%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           ++ LHAL V SG     F ++ L   Y  L   + +R  FD +   +   WN++++    
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG 201

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
               SEA++ F +      +RPD  T   VL A   + +   G+ +H    K G      
Sbjct: 202 ----SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEH 257

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V   L+ +Y + G    AR LFD M   D  ++NA+ISGY  +G    ++++  E+   G
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317

Query: 240 VSMDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +     T+ +++PV +      L+G L H ++VK GL+ N  VS  L  +Y +F  M  A
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCL-HAHVVKAGLDANAPVSTALTTLYCRFNDMDSA 376

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            R FD M E+ + SWN++I+ Y Q+     A   F  MQ   ++P+ LT+ S  S  AQL
Sbjct: 377 RRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQL 436

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + VH  I      + +V +  A++DMY K G I  A  +F+ +  K+V+SWN +
Sbjct: 437 GALSLGKWVHKIIANEKLEL-NVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVM 495

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN- 477
           I+GY  +G  +EA+++++ M + + ++P   T++S+L A SH G +++G  +   +  + 
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAH-LHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDY 554

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP--WNAIISCHGIHGQGDKALN 535
            +   +   TC+VD+ G+ G++ +A  L  + P+S+  P  W A++    +H  GD A  
Sbjct: 555 GITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA-K 613

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH--MMQEEFGIKPHLKHYGCMVD 593
              Q L E + P++  +  LL     S L +  ++Y    ++++E   +  +K  GC + 
Sbjct: 614 LASQKLFE-LEPENTGYYVLL-----SNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLI 667

Query: 594 LFGRAGHLGMA 604
             G   H+ MA
Sbjct: 668 EIGDRPHVFMA 678


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 289/784 (36%), Positives = 445/784 (56%), Gaps = 20/784 (2%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  + ++C +L  +   + +HA +V SG       +  L++ Y + G ++ +   F+ 
Sbjct: 129 VTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFER 188

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           +  R++ +WN+ I+   + G L  A++ F +  L  G+RP   T    L  C  +   + 
Sbjct: 189 ME-RDLVSWNAAIAANAQSGDLDMALELFQRMQL-EGVRPARITLVITLSVCAKIRQARA 246

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  V + G E  + V+ +L   Y R G  + A+++FD    RD  SWNAM+  Y Q G+
Sbjct: 247 IHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGH 306

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EA  +   M  EG+    +T+ +    C+   ++  G +IH   ++ GL+ ++ + N 
Sbjct: 307 MSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNA 363

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L++MY + G    A  +F+ +   + VSWN++IA   Q      A   F  MQ  G+ P 
Sbjct: 364 LLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPV 422

Query: 345 LLTLVSLTSIVA----QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             T ++L   VA    +       R +H  I+  G+  E  I G AVV MYA  G I+ A
Sbjct: 423 RATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI-GTAVVKMYASCGAIDEA 481

Query: 401 CAVFEGLPVKD---VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
            A F+   ++D   V+SWN +I+  +Q+G    A+  F+ M+  + + PNQ T V++L A
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD-LHGVAPNQITCVAVLDA 540

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
            +   AL +G+ +H  +  + +  +VFVAT L  MYG+CG ++ A  +F +V      V 
Sbjct: 541 CAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVI 600

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           +NA+I+ +  +G   +AL  F +M  EG RPD  +FVS+L+ACSH GL  EG   F  M+
Sbjct: 601 FNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMR 660

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           + +GI P   HY C VD+ GRAG L  A   I+ M V+P   +W  LLGACR + +++ G
Sbjct: 661 QSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRG 720

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
            +A+  + E+D  +   YV++SNI A  GKW+   EVR+    RGL+K  G S IE+ ++
Sbjct: 721 RLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSR 780

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F  G+R+HP+ E+IY EL  L A+++ +GYVPD   VL+ V+E EKE +L  HSERL
Sbjct: 781 VHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERL 840

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           AIA G++SS   + +++ KNLRVC DCHN TKFIS+I  +EI+VRD++RFHHF DG CSC
Sbjct: 841 AIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSC 899

Query: 817 GDYW 820
           GDYW
Sbjct: 900 GDYW 903



 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 197/586 (33%), Positives = 297/586 (50%), Gaps = 42/586 (7%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +R+HA +V  G  + +     L+  Y     L      F  +  R+  +W ++I+ 
Sbjct: 45  LSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y   G+   A+  F++     G+R D  TF  VLKAC  L D   G+ IH  +++ G E 
Sbjct: 103 YTEHGQAKRAIWMFHRMQ-QEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEG 161

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
              +A  LLH+Y   G    A  LF+ M  RD  SWNA I+   QSG+   AL++   M+
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQ 220

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           LEGV    IT+   L VCA+   I     IH  + + GLE  L VS  L + YA+ G + 
Sbjct: 221 LEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLD 277

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  VFD+  ERDVVSWN+++ AY Q      A   F  M   GI P  +TLV+ ++  +
Sbjct: 278 QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS 337

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L   R  R +H   + +G    D+++GNA++DMY + G    A  +FEG+P  + +SWN
Sbjct: 338 SL---RFGRMIHACALEKG-LDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWN 392

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS----HVGALRQGIKIHA 472
           T+I G +Q G    A+E+FQ M +   + P + TY+++L A +       A+ +G K+H+
Sbjct: 393 TMIAGSSQKGQMKRALELFQRM-QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHS 451

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP---RSSSVPWNAIISCHGIHGQ 529
           R++      +  + T +V MY  CG ID+A + F +     R   V WNAIIS    HG 
Sbjct: 452 RIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +AL FFR+M   GV P+ IT V++L AC+ +  ++EG            +  HL+H G
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG----------VIVHDHLRHSG 561

Query: 590 ---------CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
                     +  ++GR G L  A    + + V  D  I+ A++ A
Sbjct: 562 MESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/483 (31%), Positives = 256/483 (53%), Gaps = 21/483 (4%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R L  G++IH  ++ LG E ++     LL +Y +        ++F  + VRD  SW  +I
Sbjct: 43  RLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           + Y + G A  A+ +   M+ EGV  D +T  ++L  CAR  ++  G  IH +IV+ GLE
Sbjct: 101 TAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLE 160

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
               ++N L+++Y   G +  A+ +F++ MERD+VSWN+ IAA  QS D   A   F  M
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLFER-MERDLVSWNAAIAANAQSGDLDMALELFQRM 219

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  G++P  +TLV   S+ A++   R +R++H  I+R     + +++  A+   YA+LG 
Sbjct: 220 QLEGVRPARITLVITLSVCAKI---RQARAIHS-IVRESGLEQTLVVSTALASAYARLGH 275

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSIL 455
           ++ A  VF+    +DV+SWN ++  YAQ+G  SEA  +F +M+ E   I P++   V+++
Sbjct: 276 LDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE--GIPPSK---VTLV 330

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A +   +LR G  IHA  ++  L  D+ +   L+DMY +CG  ++A  LF  +P  ++V
Sbjct: 331 NASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAV 389

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS----HSGLVSEGQRY 571
            WN +I+     GQ  +AL  F++M  EG+ P   T+++LL A +     +  ++EG R 
Sbjct: 390 SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEG-RK 448

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN--MPVRPDASIWGALLGACRI 629
            H      G          +V ++   G +  A    Q   M  R D   W A++ +   
Sbjct: 449 LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ 508

Query: 630 HGN 632
           HG+
Sbjct: 509 HGH 511



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 5/185 (2%)

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           V +L A      L QG +IHAR++   L  +  +   L+ +Y KC  + D   +F ++  
Sbjct: 33  VRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVEEVFSRLEV 90

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
                W  II+ +  HGQ  +A+  F +M  EGVR D +TF+++L AC+  G +S+G R 
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG-RS 149

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    E G++        ++ ++G  G +  A    + M    D   W A + A    G
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME--RDLVSWNAAIAANAQSG 207

Query: 632 NMELG 636
           ++++ 
Sbjct: 208 DLDMA 212


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/744 (38%), Positives = 423/744 (56%), Gaps = 35/744 (4%)

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           S   ++  YAN G L+ +R  F     R+  TW+S+IS Y R G   EA++ F++     
Sbjct: 74  SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQY-E 132

Query: 141 GLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G RP+ +T+  VL+ C   V    GK+IH   +K  F+ + FV   L+ MY +      A
Sbjct: 133 GERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEA 192

Query: 198 RKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
             LF+  P  R+   W AM++GY Q+G+  +A++   +MR EG+  +  T  SIL  C  
Sbjct: 193 EYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGS 252

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                 G  +H  IV+ G   N+FV + L++MY+K G + +A R+ + M   D VSWNS+
Sbjct: 253 ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSM 312

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I    +      A   F  M    ++ D  T  S+ +  + + D RN+ SVH  I++ G 
Sbjct: 313 IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTG- 371

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F    ++ NA+VDMYAK G  + A  VFE +  KDVISW +L+TG   NG   EA+ +F 
Sbjct: 372 FEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFC 431

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     I+P+Q    ++L A + +  L  G ++HA  +K+ L   + V   LV MY KC
Sbjct: 432 EMRIMG-IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC 490

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G I+DA  +F  +     + W A+I  +  +G+G                          
Sbjct: 491 GCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR------------------------- 525

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
               H+GLV  G+ YF  M+E +GIKP  +HY CM+DL GR+G L  A   +  M V+PD
Sbjct: 526 ---DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPD 582

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A++W ALL ACR+HGN+ELG  A++ LFE++ +N   YVL+SN+Y+  GKWE   + R L
Sbjct: 583 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 642

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            + RG+ K PG S IE+++KV  F + +R+HP+  +IY ++  +   +K  GYVPD +F 
Sbjct: 643 MKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFA 702

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L D++E+ KE  L  HSE+LA+AFG+++ PP +PI+IFKNLR+CGDCH   K++S +  R
Sbjct: 703 LHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHR 762

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
            +I+RDSN FHHF++G CSC DYW
Sbjct: 763 HVILRDSNCFHHFREGACSCSDYW 786



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 232/467 (49%), Gaps = 36/467 (7%)

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAM-------------------------------ISG 218
           + G  + ARKLFD MP RD  SWN M                               ISG
Sbjct: 53  KCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISG 112

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           YC+ G  VEAL++  EM+ EG   +  T  S+L VC+    +  G  IH + +K   + N
Sbjct: 113 YCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN 172

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            FV   L++MYAK   +  A  +F+   + R+ V W +++  Y Q+ D   A   F  M+
Sbjct: 173 AFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
             GI+ +  T  S+ +    ++ C     VHG I+R G F  +V +G+A+VDMY+K G +
Sbjct: 233 GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSG-FGANVFVGSALVDMYSKCGDL 291

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           ++A  + E + V D +SWN++I G  + GL  EA+ +F++M     +  ++ TY S+L  
Sbjct: 292 SNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIM-HLRHMKIDEFTYPSVLNC 350

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
           +S V  +R  + +H+ ++K        V   LVDMY K G  D A  +F ++     + W
Sbjct: 351 FSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISW 410

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
            ++++    +G  ++AL  F +M   G+ PD I   ++L+AC+   ++  G++  H    
Sbjct: 411 TSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQ-VHANFL 469

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           + G+   L     +V ++ + G +  A+    +M ++ D   W AL+
Sbjct: 470 KSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQ-DVITWTALI 515



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 165/314 (52%), Gaps = 15/314 (4%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  +  F  +  +C  +       ++H  +V SG    VF  + LV+ Y+  GDLS +R 
Sbjct: 237 ECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARR 296

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
             + +   +  +WNSMI   VR G   EA+  F    L   ++ D +T+P VL     ++
Sbjct: 297 MLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRH-MKIDEFTYPSVLNCFSFVM 355

Query: 161 DGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           D +    +H  ++K GFE    V  +L+ MY + G  + A  +F+ M  +D  SW ++++
Sbjct: 356 DMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVT 415

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G   +G+  EAL +  EMR+ G+  D I +A++L  CA    +  G  +H   +K GL  
Sbjct: 416 GCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGS 475

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS-----NDPITAHG- 331
           +L V N+L++MYAK G +  A +VFD M  +DV++W ++I  Y Q+     +  +  HG 
Sbjct: 476 SLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGR 535

Query: 332 -FFTTMQQA-GIQP 343
            +F +M++  GI+P
Sbjct: 536 SYFQSMEEVYGIKP 549



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI------------------------- 419
           N V+   +K G ++ A  +F+ +P +D  SWNT+I                         
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 420 ------TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
                 +GY + G   EA+E+F  M+   E  PNQ T+ S+L   S    L +G +IHA 
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGE-RPNQFTWGSVLRVCSMYVLLEKGKQIHAH 163

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDK 532
            IK     + FV T LVDMY KC  I +A  LF   P + + V W A+++ +  +G G K
Sbjct: 164 AIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCM 591
           A+  FR M  EG+  +  TF S+LTAC        G Q +  +++  FG    +     +
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVG--SAL 281

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           VD++ + G L  A   ++ M V  D   W +++  C   G
Sbjct: 282 VDMYSKCGDLSNARRMLETMEV-DDPVSWNSMIVGCVRQG 320


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 288/760 (37%), Positives = 428/760 (56%), Gaps = 6/760 (0%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            ++LH L++  G     +    LV  Y+    L  +   F  ++ R+  ++NS+IS  V+ 
Sbjct: 281  EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
            G    A++ F +      L+PD  T   +L AC +   L  G ++H   +K G   D+ +
Sbjct: 341  GFSDRALELFTKMQ-RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399

Query: 181  AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              SLL +Y +      A K F      +   WN M+  Y Q  N  ++ +I  +M++EG+
Sbjct: 400  EGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459

Query: 241  SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
              +  T  SIL  C     +  G  IH +++K G + N++V + LI+MYAK+G +  ALR
Sbjct: 460  IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALR 519

Query: 301  VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            +  ++ E DVVSW ++IA Y Q +    A   F  M+  GIQ D +   S  S  A +  
Sbjct: 520  ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579

Query: 361  CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             R  + +H      G F  D+ I NA++ +YA+ G I  A   FE +  K+ ISWN+L++
Sbjct: 580  LRQGQQIHAQSYAAG-FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638

Query: 421  GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            G AQ+G   EA++VF  M    E   N  TY S + A + +  ++QG +IH+ V+K    
Sbjct: 639  GLAQSGYFEEALQVFVRMLR-TEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYD 697

Query: 481  FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             +  V+  L+ +Y K G I DA   F  +   + + WNA+I+ +  HG G +AL  F +M
Sbjct: 698  SEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
               G+ P+H+TFV +L+ACSH GLV EG  YF  M +   + P  +HY C+VDL GRAG 
Sbjct: 758  KVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQ 817

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A  +I+ MP+  DA IW  LL AC IH N+E+G  A+  L E++ E+   YVL+SNI
Sbjct: 818  LDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNI 877

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            YA   +W   D  R L +DRG+KK PG S IEV N V  FY G++ HP   +IY+ + +L
Sbjct: 878  YAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHL 937

Query: 721  TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              +   +GYV D   +L + E+ +K+ I   HSE+LAIAFG++S     PI++ KNLRVC
Sbjct: 938  NRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVC 997

Query: 781  GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             DCHNW K++S+I+ R IIVRD++RFHHF  G+CSC D+W
Sbjct: 998  NDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 173/597 (28%), Positives = 291/597 (48%), Gaps = 15/597 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L    RLH  +  SG          LV+ Y   GD   +   FD  S R+V++WN MI V
Sbjct: 74  LFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHV 133

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-------KKIHCSVLKL 172
           +V   + +  V C ++  L  G+ P+ YTF  VLKAC   V G       K++H      
Sbjct: 134 FV-AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC---VGGDIAFNYVKQVHSRTFYY 189

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF+    VA  L+ +Y + G    A+K+F+ + ++D  +W AMISG  Q+G   EA+ + 
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            +M    +   P  ++S+L    +      G  +H  ++K G     +V N L+ +Y++ 
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  A R+F  M  RD VS+NS+I+   Q      A   FT MQ+  ++PD +T+ SL 
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           S  A +        +H   ++ G    D+I+  +++D+Y+K   + +A   F     +++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAG-MSADIILEGSLLDLYSKCADVETAHKFFLTTETENI 428

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           + WN ++  Y Q    S++ E+F+ M+    I PNQ TY SIL   + +GAL  G +IH 
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGALYLGEQIHT 487

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            VIK     +V+V + L+DMY K G++  A+ +  ++P    V W A+I+ +  H    +
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSE 547

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL  F +M   G++ D+I F S ++AC+    + +GQ+  H      G    L     ++
Sbjct: 548 ALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQSYAAGFGADLSINNALI 606

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            L+ R G +  A+   + +  + + S W +L+      G  E       R+   ++E
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 277/535 (51%), Gaps = 37/535 (6%)

Query: 36  ISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL 92
           + PDC       I    L  +C     LH   +LH+  + +G    +     L++ Y+  
Sbjct: 358 LKPDC-------ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC 410

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
            D+  +   F      N+  WN M+  Y +   LS++ + F Q  +  G+ P+ +T+P +
Sbjct: 411 ADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM-EGMIPNQFTYPSI 469

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L+ C +L     G++IH  V+K GF+ +V+V + L+ MY ++G   +A ++   +P  D 
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AMI+GY Q     EAL + +EM   G+  D I  AS +  CA    +  G  IH  
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
               G   +L ++N LI++YA+ G ++ A   F+++ +++ +SWNS+++   QS     A
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M +   + ++ T  S  S  A L + +  + +H  +++ G+  E   + N+++ 
Sbjct: 650 LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE-VSNSLIS 708

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +YAK G I+ A   F  +  ++VISWN +ITGY+Q+G   EA+ +F+ M+ C  I PN  
Sbjct: 709 LYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCG-IMPNHV 767

Query: 450 TYVSILPAYSHVGALRQGI-------KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           T+V +L A SH+G +++G+       KIH  V K+    + +V  C+VD+ G+ G++D A
Sbjct: 768 TFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS----EHYV--CVVDLLGRAGQLDRA 821

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFV 553
           M    ++P  + ++ W  ++S   IH     G++A +   ++  E    D  T+V
Sbjct: 822 MEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE----DSATYV 872



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 298/603 (49%), Gaps = 16/603 (2%)

Query: 50  FDDLFQSCT----KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  + ++C       ++VK++H+     G   +   +  L++ Y+  G +  ++  F+ I
Sbjct: 162 FAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
             +++ TW +MIS   + G   EA+  F      S + P  Y    VL A   +     G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMH-ASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           +++HC V+K GF  + +V   L+ +Y R      A ++F  M  RD  S+N++ISG  Q 
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G +  AL++  +M+ + +  D ITVAS+L  CA    +  G+ +H + +K G+  ++ + 
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L+++Y+K   +  A + F      ++V WN ++ AY Q ++   +   F  MQ  G+ 
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+  T  S+      L        +H  +++ G F  +V + + ++DMYAK G +  A  
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG-FQLNVYVCSVLIDMYAKYGQLALALR 519

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +   LP  DV+SW  +I GY Q+ + SEA+++F+ ME       N G + S + A + + 
Sbjct: 520 ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIG-FASAISACAGIR 578

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           ALRQG +IHA+        D+ +   L+ +Y +CGRI +A   F ++   +++ WN+++S
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
                G  ++AL  F +ML      +  T+ S ++A +    + +GQ+  H M  + G  
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYD 697

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
              +    ++ L+ ++G +  A     +M  R   S W A++     HG      + + R
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS-WNAMITGYSQHG----CGMEALR 752

Query: 643 LFE 645
           LFE
Sbjct: 753 LFE 755



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 250/499 (50%), Gaps = 16/499 (3%)

Query: 136 FTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           F    G+R ++  +  +L+ C    +L +  ++HC + K GF+ +  +  SL+  Y R G
Sbjct: 48  FMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHG 107

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + A K+FD+   R   SWN MI  +    +  +   +   M  EG++ +  T A +L 
Sbjct: 108 DQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLK 167

Query: 253 VCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            C   D   + +  +H     +G + +  V+N LI++Y+K G +  A +VF+ +  +D+V
Sbjct: 168 ACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +W ++I+   Q+     A   F  M  + I P    L S+ S   ++        +H  +
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G F  +  + N +V +Y++   + SA  +F  +  +D +S+N+LI+G  Q G +  A
Sbjct: 288 IKWG-FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 432 IEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           +E+F +M  +C  + P+  T  S+L A + VGAL +G+++H+  IK  +  D+ +   L+
Sbjct: 347 LELFTKMQRDC--LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLL 404

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           D+Y KC  ++ A   F      + V WN ++  +G       +   FRQM  EG+ P+  
Sbjct: 405 DLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQF 464

Query: 551 TFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGC--MVDLFGRAGHLGMAHNF 607
           T+ S+L  C+  G +  G++ + H+++  F     L  Y C  ++D++ + G L +A   
Sbjct: 465 TYPSILRTCTSLGALYLGEQIHTHVIKTGF----QLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 608 IQNMPVRPDASIWGALLGA 626
           ++ +P   D   W A++  
Sbjct: 521 LRRLP-EDDVVSWTAMIAG 538



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 5/399 (1%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           + +++ M   GV  +      +L  C  S ++   + +H  I K G +    + ++L++ 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y + G    A++VFD+   R V SWN +I  +            F  M   GI P+  T 
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 349 VSLTSIVAQLNDCRN-SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             +       +   N  + VH      G F    ++ N ++D+Y+K G I SA  VF  +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYG-FDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            +KD+++W  +I+G +QNGL  EAI +F  M   +EI P      S+L A + +     G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++H  VIK     + +V   LV +Y +  ++  A  +F  +     V +N++IS     
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G  D+AL  F +M  + ++PD IT  SLL+AC+  G + +G +  H    + G+   +  
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIIL 399

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G ++DL+ +   +  AH F        +  +W  +L A
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVMLVA 437


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 284/810 (35%), Positives = 447/810 (55%), Gaps = 79/810 (9%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN---LGDLSFSRHTFDHIS 106
            D L QSC    H K+L +  +++G I   +++++L+NF ++   L    +S   F+H+ 
Sbjct: 6   LDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLR 65

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
             N +TWN+++  ++            Y+  L S  +PD YT+P +L+ C   V   +G+
Sbjct: 66  NPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGR 125

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +  GF+ DV+V  +L+++Y   G    AR++F++ PV D  SWN +++GY Q+G
Sbjct: 126 QLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAG 185

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EA  + + M                                        E N   SN
Sbjct: 186 EVEEAERVFEGMP---------------------------------------ERNTIASN 206

Query: 284 NLINMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           ++I ++ + G +  A R+F+ +   ERD+VSW+++++ YEQ+     A   F  M+ +G+
Sbjct: 207 SMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGV 266

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGF------------------------------- 370
             D + +VS  S  +++ +    R VHG                                
Sbjct: 267 AVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARR 326

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           I   G  + D+I  N+++  Y + G I  A  +F  +P KDV+SW+ +I+GYAQ+   SE
Sbjct: 327 IFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSE 386

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A+ +FQ M+  + + P++   VS + A +H+  L  G  IHA + +N L  +V ++T L+
Sbjct: 387 ALALFQEMQ-LHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLI 445

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMY KCG +++A+ +FY +       WNA+I    ++G  +++LN F  M   G  P+ I
Sbjct: 446 DMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEI 505

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TF+ +L AC H GLV++G+ YF+ M  E  I+ ++KHYGCMVDL GRAG L  A   I +
Sbjct: 506 TFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDS 565

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP+ PD + WGALLGACR H + E+G     +L ++  ++ G++VL+SNIYA+ G W  V
Sbjct: 566 MPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNV 625

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            E+R +    G+ KTPG S IE N  V  F  G++THP+   I   L  + AK+K  GYV
Sbjct: 626 LEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYV 685

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           P  S V  D++E+EKE  L  HSE+LA+AFG+I+  P +PI++ KNLR+C DCH   K I
Sbjct: 686 PTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCHTVVKLI 745

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+  +R+I+VRD +RFHHFK G CSC D+W
Sbjct: 746 SKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/671 (39%), Positives = 406/671 (60%), Gaps = 9/671 (1%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRDS 209
           L+ C  +   K+IH  +L+     D F A+ ++  +C     G    AR +F+ +P   +
Sbjct: 47  LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIV-AFCALHDSGSLPYARLVFNQIPNPTT 105

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            + N++I GY       +A+     M L+G+  D  T  S+   C     +  G  +H +
Sbjct: 106 FTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV---LCEGKQLHCH 162

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
             K G   + ++ N L+NMY+  G +  A +VFD+M+ + VVSW ++I AY Q + P  A
Sbjct: 163 STKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEA 222

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M+ A ++P+ +TLV++ +  A+  D   ++ VH +I   G     V+  +A++D
Sbjct: 223 IKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLT-SALMD 281

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +Y K G    A  +F  +P K++  WN +I G+ ++    EA+ +F  M+  + +  ++ 
Sbjct: 282 VYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ-LSGVKGDKV 340

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T  S+L A +H+GAL  G  +H  + K  +  DV + T LVDMY KCG I+ AM +F ++
Sbjct: 341 TMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 400

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
           P    + W A+I    + GQG KAL  F +M    V+PD ITFV +L ACSH+GLV+EG 
Sbjct: 401 PEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGI 460

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            YF+ M  ++GI+P ++HYGCMVD+ GRAG +  A + IQNMP+ PD  +   LL ACRI
Sbjct: 461 AYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRI 520

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
           HGN+ +   A+ +L E+D +N G YVL+SNIY+++  WE   ++R L  +R +KK PG S
Sbjct: 521 HGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCS 580

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
           +IEV   V  F  G+ +HP+  +IY+ L ++  ++KS GYVPDKS VL D++E EKE+ L
Sbjct: 581 AIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENEL 640

Query: 750 TSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
           + HSE+LAIAFG++S+ P +PI++ KNLRVC DCH+  KFIS++  REIIVRD NRFHHF
Sbjct: 641 SLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHF 700

Query: 810 KDGICSCGDYW 820
             G CSC D+W
Sbjct: 701 TKGSCSCRDFW 711



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 176/569 (30%), Positives = 290/569 (50%), Gaps = 17/569 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVY 111
            + CT +  +K++HA ++ +      FS++K+V F A  + G L ++R  F+ I     +
Sbjct: 47  LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
           T NS+I  Y       +A+  FYQ  +  GL PD +TFP + K+C  L +GK++HC   K
Sbjct: 107 TCNSIIRGYTNKNLPRQAI-LFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTK 165

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           LGF  D ++  +L++MY   G    ARK+FD M  +   SW  MI  Y Q     EA+ +
Sbjct: 166 LGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKL 225

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
              M +  V  + IT+ ++L  CARS ++ +   +H YI + G+ F+  +++ L+++Y K
Sbjct: 226 FRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCK 285

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G    A  +F++M E+++  WN +I  + + +D   A   F  MQ +G++ D +T+ SL
Sbjct: 286 CGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASL 345

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
                 L      + +H +I +    + DV +G A+VDMYAK G I SA  VF+ +P KD
Sbjct: 346 LIACTHLGALELGKWLHVYIEKEKIEV-DVALGTALVDMYAKCGSIESAMRVFQEMPEKD 404

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-I 470
           V++W  LI G A  G   +A+E+F  M + +E+ P+  T+V +L A SH G + +GI   
Sbjct: 405 VMTWTALIVGLAMCGQGLKALELFHEM-QMSEVKPDAITFVGVLAACSHAGLVNEGIAYF 463

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-VPWNAIISCHGIHGQ 529
           ++   K  +   +    C+VDM G+ GRI +A  L   +P +        ++S   IHG 
Sbjct: 464 NSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGN 523

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
              A    +Q+++  + P +     LL+    S    E  +    +  E  IK   K  G
Sbjct: 524 LVVAERAAQQLIE--LDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK---KPPG 578

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           C     G     G+ H F++     P +S
Sbjct: 579 CSAIEVG-----GVVHEFVKGDVSHPQSS 602



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 207/424 (48%), Gaps = 27/424 (6%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  LF+SC  L   K+LH      G     +    L+N Y+N G L  +R  FD +  ++
Sbjct: 143 FPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 202

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           V +W +MI  Y +     EA+  F +  + S ++P+  T   VL AC   R+L   K++H
Sbjct: 203 VVSWATMIGAYAQWDLPHEAIKLFRRMEIAS-VKPNEITLVNVLTACARSRDLETAKQVH 261

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             + + G  +   + ++L+ +YC+ G   +AR LF+ MP ++   WN MI+G+ +  +  
Sbjct: 262 KYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYE 321

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL + +EM+L GV  D +T+AS+L  C     +  G  +H+YI K  +E ++ +   L+
Sbjct: 322 EALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALV 381

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MYAK G +  A+RVF +M E+DV++W ++I         + A   F  MQ + ++PD +
Sbjct: 382 DMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAI 441

Query: 347 TLVSLTSI----------VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           T V + +           +A  N   N   +   I   G           +VDM  + G 
Sbjct: 442 TFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYG----------CMVDMLGRAGR 491

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSIL 455
           I  A  + + +P+     +  L+   +   +    +   +  ++  E++P N GTYV + 
Sbjct: 492 IAEAEDLIQNMPMAP--DYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 549

Query: 456 PAYS 459
             YS
Sbjct: 550 NIYS 553


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/773 (36%), Positives = 436/773 (56%), Gaps = 36/773 (4%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           +  L+  YA  GDL+ +   F+ +  R+  T+NS+I+      R   A+D      L  G
Sbjct: 99  ANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLL-EG 157

Query: 142 LRPDFYTFPPVLKACRNLVD----GKKIHCSVLKLGF--EWDVFVAASLLHMYCRFGLAN 195
                +T   VL AC +L +    G++ H   LK GF    + F   +LL MY R GL +
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217

Query: 196 VARKLFDDMPVRDSG-----SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            A+ LF  +   DS      +WN M+S   QSG   EA++++ +M   GV  D IT AS 
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277

Query: 251 LPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMM--E 307
           LP C++ + +  G  +H Y++K   L  N FV++ L++MYA    +  A RVFD +    
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           R +  WN+++  Y Q+     A   F  M+ +AG+ P   T+  +    A+        +
Sbjct: 338 RQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEA 397

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VHG++++RG   ++  + NA++D+YA+LG + +A  +F  +  +DV+SWNTLITG    G
Sbjct: 398 VHGYVLKRG-MADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQG 456

Query: 427 LASEAIEVFQMMEECNEIN-----------------PNQGTYVSILPAYSHVGALRQGIK 469
              +A ++ + M++                      PN  T +++LP  + + A  +G +
Sbjct: 457 HIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKE 516

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH   +++ L  D+ V + LVDMY KCG +  + ++F ++P+ + + WN +I  +G+HG 
Sbjct: 517 IHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGL 576

Query: 530 GDKALNFF-RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           GD+A+  F R ++    +P+ +TF++ L ACSHSG+V  G   FH M+   G++P    +
Sbjct: 577 GDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLH 636

Query: 589 GCMVDLFGRAGHLGMAHNFIQNM-PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
            C VD+ GRAG L  A++ I +M P     S W + LGACR+H N+ LG +A++RLF+++
Sbjct: 637 ACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLE 696

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            +   +YVL+ NIY+  G WE   EVR+  R RG+ K PG S IE++  +  F  G   H
Sbjct: 697 PDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAH 756

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+   ++  +  L  +M++ GY PD S VL D+EE EK  IL  HSE+LAIAFG++ +PP
Sbjct: 757 PESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPP 816

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + I++ KNLRVC DCH   KFIS++  REI++RD  RFHHF DG CSCGDYW
Sbjct: 817 GATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/605 (25%), Positives = 272/605 (44%), Gaps = 42/605 (6%)

Query: 145 DFYTFPPVLK---ACRNLVDGKKIHCSVLK--LGFEWDVFVAASLLHMYCRFGLANVARK 199
           D +  PP  K   A R+L+  + IH + L+  L   +   VA +LL  Y R G    A  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR-SD 258
           LF+ MP RD+ ++N++I+  C     + ALD L +M LEG  +   T+ S+L  C+  ++
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 259 NILSGLLIHLYIVKHGL--EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD-----VV 311
           ++  G   H + +K+G       F  N L++MYA+ G++  A  +F  +   D     VV
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +WN++++   QS     A      M   G++PD +T  S     +QL      R +H ++
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYAQNGLAS 429
           ++      +  + +A+VDMYA    +  A  VF+ +P   + +  WN ++ GYAQ G+  
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA+E+F  ME    + P++ T   +LPA +          +H  V+K  +  + FV   L
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNAL 417

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG----- 544
           +D+Y + G ++ A  +F  +     V WN +I+   + G    A    R+M  +G     
Sbjct: 418 MDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDA 477

Query: 545 -------------VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
                        V P+++T ++LL  C+     ++G+   H       +   +     +
Sbjct: 478 TTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKE-IHGYAMRHALDSDIAVGSAL 536

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF---EVDS 648
           VD++ + G L ++      +P R +   W  L+ A  +HG  +      DR+    E   
Sbjct: 537 VDMYAKCGCLALSRAVFDRLPKR-NVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKP 595

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
             V +   ++    +     G++   S+ R+ G++ TP   +      VDI     R   
Sbjct: 596 NEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHAC----AVDILGRAGRLDE 651

Query: 709 KYEKI 713
            Y  I
Sbjct: 652 AYSII 656



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 24/278 (8%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  ++  G     F    L++ YA LGD+  +R  F  I  R+V +WN++I+  V  G 
Sbjct: 398 VHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGH 457

Query: 126 LSEAVDC---------FYQFTLTSGLR--------PDFYTFPPVLKACRNL---VDGKKI 165
           + +A            F   T   G+         P+  T   +L  C  L     GK+I
Sbjct: 458 IHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEI 517

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   ++   + D+ V ++L+ MY + G   ++R +FD +P R+  +WN +I  Y   G  
Sbjct: 518 HGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLG 577

Query: 226 VEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSN 283
            EA+ + D M +      + +T  + L  C+ S  +  G+ L H     HG++    +  
Sbjct: 578 DEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHA 637

Query: 284 NLINMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAA 319
             +++  + G +  A  +   M   E+ V +W+S + A
Sbjct: 638 CAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGA 675



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   +       +   + LV+ YA  G L+ SR  FD +  RNV TWN +I  Y   
Sbjct: 515 KEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMH 574

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
           G   EA+  F +  +++  +P+  TF   L AC
Sbjct: 575 GLGDEAIALFDRMVMSNEAKPNEVTFIAALAAC 607


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/641 (42%), Positives = 385/641 (60%), Gaps = 6/641 (0%)

Query: 184 LLHMYCR----FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           LL+M  R    F   N  R LF  +   +   WN MI G   +    +A++    MR EG
Sbjct: 48  LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              +  T   +L  CAR  ++  G+ IH  +VK G + ++FV  +L+ +YAK G +  A 
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH 167

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VFD + +++VVSW +II+ Y        A   F  + +  + PD  T+V + S   QL 
Sbjct: 168 KVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLG 227

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           D  +   +H  IM  G  + +V +G ++VDMYAK G +  A +VF+G+P KD++SW  +I
Sbjct: 228 DLNSGEWIHKCIMEMG-MVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GYA NGL  EAI++F  M+  N + P+  T V +L A + +GAL  G  +   V +N  
Sbjct: 287 QGYALNGLPKEAIDLFLQMQREN-VKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
            ++  + T L+D+Y KCG +  A  +F  +     V WNAIIS   ++G    +   F Q
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           +   G++PD  TF+ LL  C+H+GLV EG+RYF+ M   F + P ++HYGCMVDL GRAG
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            L  AH  I+NMP+  +A +WGALLGACRIH + +L  +A  +L E++  N G YVL+SN
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSN 525

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           IY+   KW+   +VR    ++ ++K PG S IEV+  V  F  G++ HP  EKIY +L  
Sbjct: 526 IYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDE 585

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           LT KMK  GYVP   FVL D+EE+EKEH L  HSE+LAIAFG+IS+ P + I++ KNLRV
Sbjct: 586 LTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRV 645

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCH   K IS IT REI VRD+NRFH F++G CSC DYW
Sbjct: 646 CGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 249/457 (54%), Gaps = 8/457 (1%)

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
           +  D +++R  F  I   N++ WN+MI   V      +A++ FY    + G  P+ +TFP
Sbjct: 58  DFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE-FYGLMRSEGFLPNNFTFP 116

Query: 151 PVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            VLKAC  L+D   G KIH  V+K GF+ DVFV  SL+ +Y + G    A K+FDD+P +
Sbjct: 117 FVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK 176

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +  SW A+ISGY   G   EA+D+   +    ++ D  T+  +L  C +  ++ SG  IH
Sbjct: 177 NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIH 236

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
             I++ G+  N+FV  +L++MYAK G M  A  VFD M E+D+VSW ++I  Y  +  P 
Sbjct: 237 KCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPK 296

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  MQ+  ++PD  T+V + S  A+L        V G +  R  F+ + ++G A+
Sbjct: 297 EAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV-DRNEFLYNPVLGTAL 355

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +D+YAK G ++ A  VF+G+  KD + WN +I+G A NG    +  +F  +E+   I P+
Sbjct: 356 IDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLG-IKPD 414

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
             T++ +L   +H G + +G +    + +   L   +    C+VD+ G+ G +D+A  L 
Sbjct: 415 GNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLI 474

Query: 507 YQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             +P  ++++ W A++    IH     A    +Q+++
Sbjct: 475 RNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 275/760 (36%), Positives = 425/760 (55%), Gaps = 20/760 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H L+V +G ++ +F    LV+FY   G +S +   FD +  RN+ +WNSMI V+   G 
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD 268

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
                             PD  T   VL  C   R +  GK +H   +KL  + ++ V  
Sbjct: 269 -------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL--EGV 240
           +L+ MY ++G    ++ +F     ++  SWN M+ G+   G+     D+L +M    E V
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDV 375

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D +T+ + +PVC     + S   +H Y +K    ++  ++N  +  YAK G + +A R
Sbjct: 376 KADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQR 435

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  +  + + SWN++I  Y QS+DP  +      M+ +G+ PD  T+ SL S  ++L  
Sbjct: 436 VFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKS 495

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R  + VHGFI+R  W   D+ +  +V+ +Y   G + +   +F+ +    ++SWNT+IT
Sbjct: 496 LRLGKEVHGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVIT 554

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G+ QNG    A+ +F+ M     I P   + +++  A S + +LR G + HA  +K+ L 
Sbjct: 555 GHLQNGFPERALGLFRQMV-LYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLE 613

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            + F+A  ++DMY K G I  +  +F  +   S+  WNA+I  +G+HG+  +A+  F +M
Sbjct: 614 DNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEM 673

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              G  PD +TF+ +LTAC+HSGL+ EG RY   M+  FG+KP+LKHY C++D+ GRAG 
Sbjct: 674 QRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 733

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A      M   PD  IW +LL  CRIH N+E+G   + +LF ++ E    YVL+SN+
Sbjct: 734 LDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNL 793

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA +GKW+ V +VR   ++  L+K  G S IE+N KV  F  G R    +E+I      L
Sbjct: 794 YAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSIL 853

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             K+  +GY PD S V  D+ E+EK   L  HSE+LAI +G+I +   + ++++KNLR+C
Sbjct: 854 EMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRIC 913

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCHN  K IS++ EREI+VRD+ RFHHF  G CSCGDYW
Sbjct: 914 VDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 176/597 (29%), Positives = 307/597 (51%), Gaps = 44/597 (7%)

Query: 64  KRLHALLVVSGKIKTV-FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +++H L+  S ++++     T+++  YA  G    SR  FD +  +N++ WN++IS Y R
Sbjct: 104 RKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSR 163

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
                E ++ F +    + L PD +TFP V+KAC  + D   G  +H  V+K G   D+F
Sbjct: 164 NELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLF 223

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +L+  Y   G  + A KLFD MP R+  SWN+MI  +  +G+             +G
Sbjct: 224 VGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD-------------DG 270

Query: 240 VSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
             M D  TV ++LPVCAR   I  G  +H + VK  L+  L V+N L++MY+K+G +  +
Sbjct: 271 AFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDS 330

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ--AG---IQPDLLTLVSLTS 353
             +F     ++VVSWN+++  +    D    HG F  ++Q  AG   ++ D +T+++   
Sbjct: 331 QMIFKLNNNKNVVSWNTMVGGFSAEGD---IHGTFDLLRQMLAGSEDVKADEVTILNAVP 387

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
           +    +   + + +H + +++  F+ D ++ NA V  YAK G ++ A  VF G+  K + 
Sbjct: 388 VCFDESVLPSLKELHCYSLKQE-FVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLN 446

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SWN LI GYAQ+     +++    M+    + P+  T  S+L A S + +LR G ++H  
Sbjct: 447 SWNALIGGYAQSSDPRLSLDAHLQMKNSGLL-PDNFTVCSLLSACSKLKSLRLGKEVHGF 505

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           +I+N L  D+FV   ++ +Y  CG +     LF  +  +S V WN +I+ H  +G  ++A
Sbjct: 506 IIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERA 565

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACS-----HSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           L  FRQM+  G++P  I+ +++  ACS       G  +      H++++   I   +   
Sbjct: 566 LGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSI--- 622

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
              +D++ + G +  +      +  +  AS W A++    +HG     A  + +LFE
Sbjct: 623 ---IDMYAKNGAITQSSKVFNGLKEKSAAS-WNAMIMGYGMHGR----AKEAIKLFE 671



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 201/402 (50%), Gaps = 16/402 (3%)

Query: 162 GKKIHCSVL-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+KIH  V        D  +   ++ MY   G  + +R  FD +  ++   WNA+IS Y 
Sbjct: 103 GRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYS 162

Query: 221 QSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           ++    E L++  +M  +   + D  T   ++  CA   ++  GL +H  +VK GL  +L
Sbjct: 163 RNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDL 222

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           FV N L++ Y   G +  AL++FD M ER++VSWNS+I  +  + D              
Sbjct: 223 FVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD------------DG 270

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
              PD+ T+V++  + A+  +    + VHG+ ++     +++++ NA++DMY+K G I  
Sbjct: 271 AFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLS-LDKELVVNNALMDMYSKWGCIID 329

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAY 458
           +  +F+    K+V+SWNT++ G++  G      ++  QM+    ++  ++ T ++ +P  
Sbjct: 330 SQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
                L    ++H   +K    +D  +A   V  Y KCG +  A  +F+ +   +   WN
Sbjct: 390 FDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWN 449

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           A+I  +        +L+   QM + G+ PD+ T  SLL+ACS
Sbjct: 450 ALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 183/371 (49%), Gaps = 17/371 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L  +K LH   +    +     +   V  YA  G LS+++  F  I  + + +WN++I  
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGG 454

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           Y +      ++D   Q    SGL PD +T   +L AC   ++L  GK++H  +++   E 
Sbjct: 455 YAQSSDPRLSLDAHLQMK-NSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 513

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+FV  S+L +Y   G     + LFD M      SWN +I+G+ Q+G    AL +  +M 
Sbjct: 514 DLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMV 573

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           L G+    I++ ++   C+   ++  G   H Y +KH LE N F++ ++I+MYAK G + 
Sbjct: 574 LYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAIT 633

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            + +VF+ + E+   SWN++I  Y        A   F  MQ+ G  PD LT + +     
Sbjct: 634 QSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGV----- 688

Query: 357 QLNDCRNSRSVHGFI-----MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK 410
            L  C +S  +H  +     M+  + ++  +   A V+DM  + G +++A  V   +  +
Sbjct: 689 -LTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEE 747

Query: 411 -DVISWNTLIT 420
            DV  WN+L++
Sbjct: 748 PDVGIWNSLLS 758



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 187/422 (44%), Gaps = 28/422 (6%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPI------TVASILPVCARSDNILSGLLIH-L 268
           IS +C++G+  ++  ++ E   +  S   +       +  +L    +  +I  G  IH L
Sbjct: 50  ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
                 L  +  +   +I MYA  G    +   FD +  +++  WN++I++Y ++     
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169

Query: 329 AHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
               F  M  +  + PD  T   +    A ++D     +VHG +++ G  +ED+ +GNA+
Sbjct: 170 VLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTG-LVEDLFVGNAL 228

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           V  Y   G ++ A  +F+ +P ++++SWN++I  ++ NG             +     P+
Sbjct: 229 VSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG-------------DDGAFMPD 275

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T V++LP  +    +  G  +H   +K  L  ++ V   L+DMY K G I D+  +F 
Sbjct: 276 VATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFK 335

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML--DEGVRPDHITFVSLLTAC-SHSGL 564
                + V WN ++      G      +  RQML   E V+ D +T ++ +  C   S L
Sbjct: 336 LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVL 395

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            S  + + + +++EF     L +    V  + + G L  A      +  +   S W AL+
Sbjct: 396 PSLKELHCYSLKQEFVYDELLAN--AFVASYAKCGSLSYAQRVFHGIRSKTLNS-WNALI 452

Query: 625 GA 626
           G 
Sbjct: 453 GG 454



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 18/280 (6%)

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           D    R +H  +        D ++   ++ MYA  G  + + + F+ L  K++  WN +I
Sbjct: 99  DIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVI 158

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y++N L  E +E+F  M     + P+  T+  ++ A + +  +  G+ +H  V+K  L
Sbjct: 159 SSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGL 218

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D+FV   LV  YG  G + DA+ LF  +P  + V WN++I     +G           
Sbjct: 219 VEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD---------- 268

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
             D    PD  T V++L  C+    +  G +  H    +  +   L     ++D++ + G
Sbjct: 269 --DGAFMPDVATVVTVLPVCAREREIGVG-KGVHGWAVKLSLDKELVVNNALMDMYSKWG 325

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACR----IHGNMEL 635
            + +    I  +    +   W  ++G       IHG  +L
Sbjct: 326 CI-IDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDL 364


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 288/832 (34%), Positives = 444/832 (53%), Gaps = 80/832 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + SC  L   +RL   L+       V +   ++N Y  LG LS +   F  +  R+V +W
Sbjct: 49  YLSCGALPDARRL---LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASW 105

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           N+++S Y +  +   +++ F     +    P+ +TF   +K+C  L +     ++   V 
Sbjct: 106 NTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ 165

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLF----------------------------- 201
           K G + D  VAA+L+ M+ R G  ++A +LF                             
Sbjct: 166 KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALE 225

Query: 202 --DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
             D MP RD  SWN M+S   QSG   EALD++ +M+ +GV +D  T  S L  CAR  +
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  +H  ++++    + +V++ L+ +YAK G  + A  VF+ + +R+ V+W  +IA 
Sbjct: 286 LRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAG 345

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           + Q      +   F  M+   +  D   L +L S      D    R +H   ++ G  ++
Sbjct: 346 FLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ-IQ 404

Query: 380 DVIIGNAVVDMYAK-------------------------------LGIINSACAVFEGLP 408
            V++ N+++ MYAK                               +G I  A   F+G+ 
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMS 464

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            K+VI+WN ++  Y Q+G   + + ++ +M    ++ P+  TYV++    + +GA + G 
Sbjct: 465 TKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGD 524

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +I  R +K  L  D  VA  ++ MY KCGRI +A  +F  +     V WNA+I+ +  HG
Sbjct: 525 QIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +A+  F  +L  G +PD+I++V++L+ CSHSGLV EG+ YF MM+    I P L+H+
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF 644

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL GRAGHL  A + I  MP++P A +WGALL AC+IHGN EL  +A+  +FE+DS
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS 704

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            + G Y+LM+ IYA+ GK +   ++R L RD+G+KK PG+S +EVNNKV +F   + +HP
Sbjct: 705 PDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHP 764

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           +   I  +L  L  K+  LGYV   S          +  I   HSE+LA+AFG++S P  
Sbjct: 765 QVIAIRKKLDELMEKIARLGYVRTDS---------PRSEI--HHSEKLAVAFGLMSLPAW 813

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            PI I KNLR+CGDCH   K IS +T RE ++RD+ RFHHF  G CSCGDYW
Sbjct: 814 MPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 284/572 (49%), Gaps = 50/572 (8%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D+F  C  +    RL     V  K  T+F    ++  Y     +  +   FD +  R+V 
Sbjct: 181 DMFVRCGTVDLASRL----FVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVV 236

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +WN M+S   + GR+ EA+D       + G+R D  T+   L AC  L     GK++H  
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQ-SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 295

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           V++     D +VA++L+ +Y + G    A+ +F+ +  R++ +W  +I+G+ Q G   E+
Sbjct: 296 VIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTES 355

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           +++ ++MR E +++D   +A+++  C    ++  G  +H   +K G    + VSN+LI+M
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM------------ 336
           YAK   ++ A  +F  M E+D+VSW S+I A+ Q  +   A  FF  M            
Sbjct: 416 YAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAML 475

Query: 337 --------------------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
                                +  ++PD +T V+L    A L   +    + G  ++ G 
Sbjct: 476 GAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + D  + NAV+ MY+K G I  A  VF+ L VKD++SWN +ITGY+Q+G+  +AIE+F 
Sbjct: 536 IL-DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQG---IKIHARVIKNCLCFDVFVATCLVDMY 493
            + +     P+  +YV++L   SH G +++G     +  RV       + F  +C+VD+ 
Sbjct: 595 DILK-RGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF--SCMVDLL 651

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           G+ G + +A  L  ++P + ++  W A++S   IHG  + A     + + E   PD  ++
Sbjct: 652 GRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSY 710

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           + +    + +G   +  +   +M+++ GIK +
Sbjct: 711 MLMAKIYADAGKSDDSAQIRKLMRDK-GIKKN 741


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/659 (40%), Positives = 393/659 (59%), Gaps = 4/659 (0%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K IH ++L+LG + D ++   +L     FG  N + ++ D     +   +N MI G   +
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               E+++I   MR EG+S D  T   +L  CAR  +   G+ +H  +VK G E + FV 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +LIN+Y K G + +A +VFD + +++  SW + I+ Y        A   F  + + G++
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  +LV + S   +  D R+   +  +I   G  + +V +  A+VD Y K G +  A +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENG-MVRNVFVATALVDFYGKCGNMERARS 265

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 461
           VF+G+  K+++SW+++I GYA NGL  EA+++F +M+ E   + P+    V +L + + +
Sbjct: 266 VFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNE--GLKPDCYAMVGVLCSCARL 323

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL  G      +  N    +  + T L+DMY KCGR+D A  +F  + +   V WNA I
Sbjct: 324 GALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAI 383

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S   + G    AL  F QM   G++PD  TFV LL AC+H+GLV EG+RYF+ M+  F +
Sbjct: 384 SGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTL 443

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P ++HYGCMVDL GRAG L  AH  I++MP+  +A +WGALLG CR+H + +L  V   
Sbjct: 444 TPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLK 503

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           +L  ++  + G YVL+SNIYA   KWE   ++RS+  +RG+KK PG+S IEV+  V  F 
Sbjct: 504 KLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFL 563

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+ +HP  EKIY +L  L   +K+ GYVP    VL D+EE+EKEH +  HSE+LA+AFG
Sbjct: 564 VGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFG 623

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IS+ P   I + KNLRVCGDCH   K IS+I  REIIVRD+NRFH F DG+CSC DYW
Sbjct: 624 LISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/486 (32%), Positives = 260/486 (53%), Gaps = 20/486 (4%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L Q  + L H+K +HA L+  G  +  +   K++ F  N G+ ++S    D     N++ 
Sbjct: 16  LIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFL 75

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           +N+MI   V      E+++ ++      GL PD +TFP VLKAC  ++D   G K+H  V
Sbjct: 76  FNTMIRGLVLNDCFQESIEIYHSMR-KEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV 134

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K G E D FV  SL+++Y + G  + A K+FDD+P ++  SW A ISGY   G   EA+
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAI 194

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+   +   G+  D  ++  +L  C R+ ++ SG  I  YI ++G+  N+FV+  L++ Y
Sbjct: 195 DMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFY 254

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G M  A  VFD M+E+++VSW+S+I  Y  +  P  A   F  M   G++PD   +V
Sbjct: 255 GKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMV 314

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            +    A+L            I     F+++ ++G A++DMYAK G ++ A  VF G+  
Sbjct: 315 GVLCSCARLGALELGDWASNLI-NGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRK 373

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD + WN  I+G A +G   +A+ +F  ME+ + I P++ T+V +L A +H G + +G  
Sbjct: 374 KDRVVWNAAISGLAMSGHVKDALGLFGQMEK-SGIKPDRNTFVGLLCACTHAGLVEEG-- 430

Query: 470 IHARVIKNCLCFDVFVAT-------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
              R   +  C  VF  T       C+VD+ G+ G +D+A  L   +P  ++++ W A++
Sbjct: 431 --RRYFNSMEC--VFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALL 486

Query: 522 SCHGIH 527
               +H
Sbjct: 487 GGCRLH 492


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/748 (37%), Positives = 412/748 (55%), Gaps = 95/748 (12%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + S   +++ Y   G+LS +R  F+ +  ++V +WN+M+S + + G + EA   F Q 
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179

Query: 137 TLTSGLRPD----FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            + + +  +     Y     ++  R L D K           +W++     L+  Y R  
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSK----------MDWEIVSWNCLMGGYVRKK 229

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + AR LFD MPVRD  SWN MI+GY Q+G   EA  + +E+        PI       
Sbjct: 230 RLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL--------PIR------ 275

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
                                    ++F    +++ + + GM+  A R+F++M E++ VS
Sbjct: 276 -------------------------DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++IA Y QS     A   F  M                         RN+ S      
Sbjct: 311 WNAMIAGYVQSQQIEKARELFDQMPS-----------------------RNTSS------ 341

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
              W        N +V  YA+ G I+ A  +F+ +P +D ISW  +I+GYAQ+G + EA+
Sbjct: 342 ---W--------NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEAL 390

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  M+    I  N+      L + + + AL  G ++H R++K            L+ M
Sbjct: 391 HLFIKMKRDGGI-LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAM 449

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           YGKCG I++A  +F  +     V WN +I+ +  HG G +AL  F  M    ++PD +T 
Sbjct: 450 YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTL 508

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           V +L+ACSH+GLV +G  YF+ M + +GI  + KHY CM+DL GRAG L  A N +++MP
Sbjct: 509 VGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
             PDA+ WGALLGA RIHG+ ELG  A++++FE++ +N G YVL+SN+YA  G+W  V E
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           +RS  RD+G+KK PG+S +E+ NK  IF  G+ +HP+ E+IY  L  L  ++K  G+V  
Sbjct: 629 MRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSS 688

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
              VL DVEE+EKEH+L  HSE+LA+AFGI+S PP  PI++ KNLRVC DCHN  K IS+
Sbjct: 689 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISK 748

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IT+R+IIVRDSNRFHHF +G CSCGDYW
Sbjct: 749 ITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 253/546 (46%), Gaps = 66/546 (12%)

Query: 68  ALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           AL V +G + ++  +   +++ Y +      +R  F+ +  R++ +WN M+S YV+ G L
Sbjct: 79  ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNL 138

Query: 127 SEAVDCFYQF---------TLTSGLRPDFYT------FPPVLKACRNLVDGKKIHCSVLK 171
           S A   F Q           + SG   + +       F  +L   +N +    +  + ++
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML--VKNEISWNGLLSAYVQ 196

Query: 172 LG------------FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            G             +W++     L+  Y R    + AR LFD MPVRD  SWN MI+GY
Sbjct: 197 NGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGY 256

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVAS------------ILPVCARSDNILSGLLIH 267
            Q+G   EA  + +E+ +  V      V+             I       + +    +I 
Sbjct: 257 AQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIA 316

Query: 268 LYIVKHGLE-----FNLFVS------NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
            Y+    +E     F+   S      N ++  YA+ G +  A  +FD+M +RD +SW ++
Sbjct: 317 GYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+ Y QS     A   F  M++ G   +   L    S  A++      + +HG +++ G 
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG- 435

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F    I GNA++ MY K G I  A  VFE +  KD++SWNT+I GYA++G   EA+ +F+
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGK 495
            M+    I P+  T V +L A SH G + +G++    + +N  +  +    TC++D+ G+
Sbjct: 496 SMKMT--IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGR 553

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHIT 551
            GR+D+A++L   +P    +  W A++    IHG    G+KA     +M      PD+  
Sbjct: 554 AGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM-----EPDNSG 608

Query: 552 FVSLLT 557
              LL+
Sbjct: 609 MYVLLS 614



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 26/179 (14%)

Query: 54  FQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
             SC ++  +   K+LH  LV +G      +   L+  Y   G +  +   F+ I+ +++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVL 170
            +WN+MI+ Y R G   EA+  F    +T  ++PD  T   VL AC         H  ++
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT--IKPDDVTLVGVLSACS--------HTGLV 521

Query: 171 KLGFEW------DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMI 216
             G E+      +  + A+  H  C      R G  + A  L   MP   D+ +W A++
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/749 (36%), Positives = 418/749 (55%), Gaps = 9/749 (1%)

Query: 50  FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  SCTK       + +HA     G    +F    ++  Y   G    +   F  + 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           +R+  T+N++IS + +CG    A++ F +    SGL PD  T   +L AC +L D   G 
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  + K G   D  +  SLL +Y + G    A  +F+     +   WN M+  + Q  
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ ++  +M+  G+  +  T   IL  C  +  I  G  IH   VK G E +++VS 
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+G +  A RV + + E+DVVSW S+IA Y Q      A   F  MQ+ GI P
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWP 444

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +N  R    +H  I   G +  DV I NA+V++YA+ G I  A + 
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSG-YSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  KD I+WN L++G+AQ+GL  EA++VF  M++   +  N  T+VS L A +++  
Sbjct: 504 FEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANLAE 562

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHARVIK    F+  V   L+ +YGKCG  +DA   F ++   + V WN II+ 
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITS 622

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+G +AL+ F QM  EG++P+ +TF+ +L ACSH GLV EG  YF  M +E+GI+P
Sbjct: 623 CSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRP 682

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C++D+FGRAG L  A  FI+ MP+  DA +W  LL AC++H N+E+G  A+  L
Sbjct: 683 RPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHL 742

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA   KW   D+VR + RDRG++K PG S IEV N V  F+ G
Sbjct: 743 LELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 802

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  E+IY+ L  +  ++  +GY  +K  +  D E++ ++     HSE+LA+ FG++
Sbjct: 803 DRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLM 862

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
           S PP  P+++ KNLRV      +  F+ Q
Sbjct: 863 SLPPCMPLRVIKNLRVEKYTSLYANFLHQ 891



 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 185/651 (28%), Positives = 328/651 (50%), Gaps = 20/651 (3%)

Query: 48  IDFDDLFQSCT----KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +DF    ++C     +   V  +HA  V  G  K       L++ Y+  G +  +R  F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            +S R+  +W +M+S Y + G   EA+  + Q    +G+ P  Y    VL +C       
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH-RAGVVPTPYVLSSVLSSCTKAELFA 160

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+ IH    K GF  ++FV  +++ +Y R G   +A ++F DMP RD+ ++N +ISG+ 
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G+   AL+I +EM+  G+S D +T++S+L  CA   ++  G  +H Y+ K G+  +  
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +  +L+++Y K G +  AL +F+     +VV WN ++ A+ Q ND   +   F  MQ AG
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I+P+  T   +        +      +H   ++ G F  D+ +   ++DMY+K G +  A
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKA 399

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             V E L  KDV+SW ++I GY Q+    +A+  F+ M++C  I P+     S +   + 
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-IWPDNIGLASAISGCAG 458

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A+RQG++IHAR+  +    DV +   LV++Y +CGRI +A S F ++     + WN +
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           +S     G  ++AL  F +M   GV+ +  TFVS L+A ++   + +G++  H    + G
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTG 577

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
                +    ++ L+G+ G    A      M  R + S W  ++ +C  HG    G  A 
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGR---GLEAL 633

Query: 641 DRLFEVDSENVG----YYVLMSNIYANVG-KWEGVDEVRSLARDRGLKKTP 686
           D   ++  E +      ++ +    ++VG   EG+   +S++ + G++  P
Sbjct: 634 DLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/713 (38%), Positives = 409/713 (57%), Gaps = 40/713 (5%)

Query: 146 FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD-DM 204
           F +    L +        K+H  ++ LG    V  +A L+  Y  F     +  +F    
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P  +   WN++I     +G   EAL +  E +   +  D  T  S++  CA   +     
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS- 323
            IH  ++  G   +L++ N LI+MY +F  +  A +VF++M  RDVVSWNS+I+ Y  + 
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 324 --NDPITAH----GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
             N+ +  +      F  M     +PDLLT+ S+      L D    + VH +++  G+ 
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             D    N +++MYAK G + ++  VF G+  KD +SWN++I  Y QNG   ++++VF+ 
Sbjct: 255 C-DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313

Query: 438 M------------------EECN------------EINPNQGTYVSILPAYSHVGALRQG 467
           M                  E+CN             + P+  T +SILP  S + A RQG
Sbjct: 314 MKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 373

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            +IH  + K  L  DV V   L++MY KCG + ++  +F  +     V W A+IS  G++
Sbjct: 374 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 433

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G+G KA+  F +M   G+ PDH+ FV+++ ACSHSGLV EG  YFH M++++ I+P ++H
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y C+VDL  R+  L  A +FI +MP++PD+SIWGALL ACR+ G+ E+    S+R+ E++
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELN 553

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            ++ GYYVL+SNIYA +GKW+ V  +R   + RGLKK PG S +E+ NKV +F TG +  
Sbjct: 554 PDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFF 613

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
            ++E++   L  L   M   GY+ +  FVL D++EDEK  IL  HSERLAIAFG++++ P
Sbjct: 614 EQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKP 673

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +P+Q+ KNLRVC DCH  TK+IS+I +RE++VRD+NRFH FKDG CSCGDYW
Sbjct: 674 GTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/545 (31%), Positives = 278/545 (51%), Gaps = 51/545 (9%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWN 114
           + T+LH   +LH+L++  G   +V  S KL+  YA+  D + S   F   S   NVY WN
Sbjct: 28  TTTQLH---KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWN 84

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLK 171
           S+I      G  SEA+   Y  T    L+PD YTFP V+ AC  L+D    K IH  VL 
Sbjct: 85  SIIRALTHNGLFSEALS-LYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLD 143

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           +GF  D+++  +L+ MYCRF   + ARK+F++MP+RD  SWN++ISGY  +G   EAL+I
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203

Query: 232 LDE---MRLEGVSM---DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
             +   + +E V+    D +T+ SIL  C    ++  G  +H Y++  G E +   SN L
Sbjct: 204 YYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 263

Query: 286 INMYAKF-------------------------------GMMRHALRVFDQMMERDVVSWN 314
           INMYAK                                G M  +L+VF+ M  RD+++WN
Sbjct: 264 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWN 323

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +IIA+   S D        + M+  G+ PD+ T++S+  + + L   R  + +HG I + 
Sbjct: 324 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 383

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G    DV +GN +++MY+K G + ++  VF+ +  KDV++W  LI+     G   +A+  
Sbjct: 384 G-LESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRA 442

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMY 493
           F  ME    I P+   +V+I+ A SH G + +G+    R+ K+  +   +    C+VD+ 
Sbjct: 443 FGEMEAAG-IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLL 501

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
            +   +D A      +P +  S  W A++S   + G  + A     ++++  + PD   +
Sbjct: 502 SRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE--LNPDDTGY 559

Query: 553 VSLLT 557
             L++
Sbjct: 560 YVLVS 564


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/749 (36%), Positives = 418/749 (55%), Gaps = 9/749 (1%)

Query: 50  FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  SCTK       + +HA     G    +F    ++  Y   G    +   F  + 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           +R+  T+N++IS + +CG    A++ F +    SGL PD  T   +L AC +L D   G 
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  + K G   D  +  SLL +Y + G    A  +F+     +   WN M+  + Q  
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ ++  +M+  G+  +  T   IL  C  +  I  G  IH   VK G E +++VS 
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+G +  A RV + + E+DVVSW S+IA Y Q      A   F  MQ+ GI P
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWP 444

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +N  R    +H  I   G +  DV I NA+V++YA+ G I  A + 
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSG-YSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE +  KD I+WN L++G+AQ+GL  EA++VF  M++   +  N  T+VS L A +++  
Sbjct: 504 FEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANLAE 562

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHARVIK    F+  V   L+ +YGKCG  +DA   F ++   + V WN II+ 
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITS 622

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+G +AL+ F QM  EG++P+ +TF+ +L ACSH GLV EG  YF  M +E+GI+P
Sbjct: 623 CSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRP 682

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C++D+FGRAG L  A  FI+ MP+  DA +W  LL AC++H N+E+G  A+  L
Sbjct: 683 RPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHL 742

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA   KW   D+VR + RDRG++K PG S IEV N V  F+ G
Sbjct: 743 LELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 802

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  E+IY+ L  +  ++  +GY  +K  +  D E++ ++     HSE+LA+ FG++
Sbjct: 803 DRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLM 862

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
           S PP  P+++ KNLRV      +  F+ Q
Sbjct: 863 SLPPCMPLRVIKNLRVEKYTSLYANFLHQ 891



 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 185/651 (28%), Positives = 328/651 (50%), Gaps = 20/651 (3%)

Query: 48  IDFDDLFQSCT----KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +DF    ++C     +   V  +HA  V  G  K       L++ Y+  G +  +R  F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            +S R+  +W +M+S Y + G   EA+  + Q    +G+ P  Y    VL +C       
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH-RAGVVPTPYVLSSVLSSCTKAELFA 160

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+ IH    K GF  ++FV  +++ +Y R G   +A ++F DMP RD+ ++N +ISG+ 
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G+   AL+I +EM+  G+S D +T++S+L  CA   ++  G  +H Y+ K G+  +  
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +  +L+++Y K G +  AL +F+     +VV WN ++ A+ Q ND   +   F  MQ AG
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I+P+  T   +        +      +H   ++ G F  D+ +   ++DMY+K G +  A
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKA 399

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             V E L  KDV+SW ++I GY Q+    +A+  F+ M++C  I P+     S +   + 
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-IWPDNIGLASAISGCAG 458

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A+RQG++IHAR+  +    DV +   LV++Y +CGRI +A S F ++     + WN +
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           +S     G  ++AL  F +M   GV+ +  TFVS L+A ++   + +G++  H    + G
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTG 577

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
                +    ++ L+G+ G    A      M  R + S W  ++ +C  HG    G  A 
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGR---GLEAL 633

Query: 641 DRLFEVDSENVG----YYVLMSNIYANVG-KWEGVDEVRSLARDRGLKKTP 686
           D   ++  E +      ++ +    ++VG   EG+   +S++ + G++  P
Sbjct: 634 DLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/760 (37%), Positives = 427/760 (56%), Gaps = 6/760 (0%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            ++LH L++  G     +    LV  Y+    L  +   F  ++ R+  ++NS+IS  V+ 
Sbjct: 281  EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
            G    A++ F +      L+PD  T   +L AC +   L  G ++H   +K G   D+ +
Sbjct: 341  GFSDRALELFTKMQ-RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399

Query: 181  AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              SLL +Y +      A K F      +   WN M+  Y Q  N  ++ +I  +M++EG+
Sbjct: 400  EGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459

Query: 241  SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
              +  T  SIL  C     +  G  IH +++K G + N++V + LI+MYAK+G +  ALR
Sbjct: 460  IPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALR 519

Query: 301  VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            +  ++ E DVVSW ++IA Y Q +    A   F  M+  GIQ D +   S  S  A +  
Sbjct: 520  ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRA 579

Query: 361  CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             R  + +H      G F  D+ I NA++ +YA+ G I  A   FE +  K+ ISWN+L++
Sbjct: 580  LRQGQQIHAQSYAAG-FGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638

Query: 421  GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            G AQ+G   EA++VF  M    E   N  TY S + A + +  ++QG +IH+ V+K    
Sbjct: 639  GLAQSGYFEEALQVFVRMLR-TEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYD 697

Query: 481  FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             +  V+  L+ +Y K G I DA   F  +   + + WNA+I+ +  HG G +AL  F +M
Sbjct: 698  SEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
               G+ P+H+TFV +L+ACSH GLV EG  YF  M +   + P  +HY C+VDL GRAG 
Sbjct: 758  KVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQ 817

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A  +I+ MP+  DA IW  LL AC IH N+E+G  A+  L E++ E+   YVL+SNI
Sbjct: 818  LDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNI 877

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            YA   +W   D  R L +D G+KK PG S IEV N V  FY G++ HP   +IY+ + +L
Sbjct: 878  YAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHL 937

Query: 721  TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              +   +GYV D   +L + E+ +K+ I   HSE+LAIAFG++S     PI++ KNLRVC
Sbjct: 938  NRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVC 997

Query: 781  GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             DCHNW K++S+I+ R IIVRD++RFHHF  G+CSC D+W
Sbjct: 998  NDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 173/597 (28%), Positives = 291/597 (48%), Gaps = 15/597 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L    RLH  +  SG          LV+ Y   GD   +   FD  S R+V++WN MI V
Sbjct: 74  LFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHV 133

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-------KKIHCSVLKL 172
           +V   + +  V C ++  L  G+ P+ YTF  VLKAC   V G       K++H      
Sbjct: 134 FV-AQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC---VGGDIAFNYVKQVHSRTFYY 189

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF+    VA  L+ +Y + G    A+K+F+ + ++D  +W AMISG  Q+G   EA+ + 
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            +M    +   P  ++S+L    +      G  +H  ++K G     +V N L+ +Y++ 
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  A R+F  M  RD VS+NS+I+   Q      A   FT MQ+  ++PD +T+ SL 
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           S  A +        +H   ++ G    D+I+  +++D+Y+K   + +A   F     +++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAG-MSADIILEGSLLDLYSKCADVETAHKFFLXTETENI 428

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           + WN ++  Y Q    S++ E+F+ M+    I PNQ TY SIL   + +GAL  G +IH 
Sbjct: 429 VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGALYLGEQIHT 487

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            VIK     +V+V + L+DMY K G++  A+ +  ++P    V W A+I+ +  H    +
Sbjct: 488 HVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSE 547

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL  F +M   G++ D+I F S ++AC+    + +GQ+  H      G    L     ++
Sbjct: 548 ALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQSYAAGFGADLSINNALI 606

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            L+ R G +  A+   + +  + + S W +L+      G  E       R+   ++E
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 277/535 (51%), Gaps = 37/535 (6%)

Query: 36  ISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL 92
           + PDC       I    L  +C     LH   +LH+  + +G    +     L++ Y+  
Sbjct: 358 LKPDC-------ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKC 410

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
            D+  +   F      N+  WN M+  Y +   LS++ + F Q  +  G+ P+ +T+P +
Sbjct: 411 ADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM-EGMIPNQFTYPSI 469

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L+ C +L     G++IH  V+K GF+ +V+V + L+ MY ++G   +A ++   +P  D 
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AMI+GY Q     EAL + +EM   G+  D I  AS +  CA    +  G  IH  
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
               G   +L ++N LI++YA+ G ++ A   F+++ +++ +SWNS+++   QS     A
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEA 649

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M +   + ++ T  S  S  A L + +  + +H  +++ G+  E   + N+++ 
Sbjct: 650 LQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE-VSNSLIS 708

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +YAK G I+ A   F  +  ++VISWN +ITGY+Q+G   EA+ +F+ M+ C  I PN  
Sbjct: 709 LYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCG-IMPNHV 767

Query: 450 TYVSILPAYSHVGALRQGI-------KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           T+V +L A SH+G +++G+       KIH  V K+    + +V  C+VD+ G+ G++D A
Sbjct: 768 TFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKS----EHYV--CVVDLLGRAGQLDRA 821

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFV 553
           M    ++P  + ++ W  ++S   IH     G++A +   ++  E    D  T+V
Sbjct: 822 MEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE----DSATYV 872



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 298/603 (49%), Gaps = 16/603 (2%)

Query: 50  FDDLFQSCT----KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  + ++C       ++VK++H+     G   +   +  L++ Y+  G +  ++  F+ I
Sbjct: 162 FAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
             +++ TW +MIS   + G   EA+  F      S + P  Y    VL A   +     G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDMH-ASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           +++HC V+K GF  + +V   L+ +Y R      A ++F  M  RD  S+N++ISG  Q 
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G +  AL++  +M+ + +  D ITVAS+L  CA    +  G+ +H + +K G+  ++ + 
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L+++Y+K   +  A + F      ++V WN ++ AY Q ++   +   F  MQ  G+ 
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+  T  S+      L        +H  +++ G F  +V + + ++DMYAK G +  A  
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG-FQLNVYVCSVLIDMYAKYGQLALALR 519

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +   LP  DV+SW  +I GY Q+ + SEA+++F+ ME       N G + S + A + + 
Sbjct: 520 ILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIG-FASAISACAGIR 578

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           ALRQG +IHA+        D+ +   L+ +Y +CGRI +A   F ++   +++ WN+++S
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
                G  ++AL  F +ML      +  T+ S ++A +    + +GQ+  H M  + G  
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYD 697

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
              +    ++ L+ ++G +  A     +M  R   S W A++     HG      + + R
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMSERNVIS-WNAMITGYSQHG----CGMEALR 752

Query: 643 LFE 645
           LFE
Sbjct: 753 LFE 755



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 250/499 (50%), Gaps = 16/499 (3%)

Query: 136 FTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           F    G+R ++  +  +L+ C    +L +  ++HC + K GF+ +  +  SL+  Y R G
Sbjct: 48  FMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHG 107

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + A K+FD+   R   SWN MI  +    +  +   +   M  EG++ +  T A +L 
Sbjct: 108 DQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLK 167

Query: 253 VCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            C   D   + +  +H     +G + +  V+N LI++Y+K G +  A +VF+ +  +D+V
Sbjct: 168 ACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +W ++I+   Q+     A   F  M  + I P    L S+ S   ++        +H  +
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G F  +  + N +V +Y++   + SA  +F  +  +D +S+N+LI+G  Q G +  A
Sbjct: 288 IKWG-FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 432 IEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           +E+F +M  +C  + P+  T  S+L A + VGAL +G+++H+  IK  +  D+ +   L+
Sbjct: 347 LELFTKMQRDC--LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLL 404

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           D+Y KC  ++ A   F      + V WN ++  +G       +   FRQM  EG+ P+  
Sbjct: 405 DLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQF 464

Query: 551 TFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGC--MVDLFGRAGHLGMAHNF 607
           T+ S+L  C+  G +  G++ + H+++  F     L  Y C  ++D++ + G L +A   
Sbjct: 465 TYPSILRTCTSLGALYLGEQIHTHVIKTGF----QLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 608 IQNMPVRPDASIWGALLGA 626
           ++ +P   D   W A++  
Sbjct: 521 LRRLP-EDDVVSWTAMIAG 538



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 5/399 (1%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           + +++ M   GV  +      +L  C  S ++   + +H  I K G +    + ++L++ 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y + G    A++VFD+   R V SWN +I  +            F  M   GI P+  T 
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 349 VSLTSIVAQLNDCRN-SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             +       +   N  + VH      G F    ++ N ++D+Y+K G I SA  VF  +
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYG-FDSSPLVANLLIDLYSKNGYIESAKKVFNCI 221

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            +KD+++W  +I+G +QNGL  EAI +F  M   +EI P      S+L A + +     G
Sbjct: 222 CMKDIVTWVAMISGLSQNGLEEEAILLFCDM-HASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++H  VIK     + +V   LV +Y +  ++  A  +F  +     V +N++IS     
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G  D+AL  F +M  + ++PD IT  SLL+AC+  G + +G +  H    + G+   +  
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKAGMSADIIL 399

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G ++DL+ +   +  AH F        +  +W  +L A
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVMLVA 437


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 278/798 (34%), Positives = 453/798 (56%), Gaps = 25/798 (3%)

Query: 44  ESREIDFD-----DLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKL-----VNFYA 90
           E+REI  +      +  +C+ L  +   KR+H L++    ++       L     +  Y 
Sbjct: 2   EAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYL 61

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
             G    +   FD +  +NV  W S+IS +   G   +A+  F +  L SG+ PD  TF 
Sbjct: 62  RCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLL-SGVSPDRITFT 120

Query: 151 PVLKAC----RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
            +L       RNL +GK++H  +++ G+E D  V   ++ MY + G    A  +FD +  
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
            +  SW  +I+ Y Q+G+ +E L +L  M   GV  D  T  ++L  C     +    ++
Sbjct: 181 PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKIL 240

Query: 267 HLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           H   +   GL+ +  V   LIN+Y K G +  A  VF Q+  +D+VSW+S+IAA+ QS  
Sbjct: 241 HAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQ 300

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
             +A      M   G++P+ +T V++   V  L   +  + +H  I++ G + +DV + +
Sbjct: 301 AKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAG-YSDDVCLTS 359

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+V MY   G + +A ++FE    +DV+SW+++I GY+QN   + A+ +F+ ME  + + 
Sbjct: 360 ALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREME-VDGVQ 418

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN  T+VS + A + VGALR+G ++H RV    L  DV VAT LV++YGKCGR+++A ++
Sbjct: 419 PNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAV 478

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  + + + + W +I   +G +G G ++L     M  +G++PD I FV++L +C+++G +
Sbjct: 479 FLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQM 538

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
           S+G  Y+++M ++FGI P ++H GCMVD+ GRAG L  A   I  M      + W  LL 
Sbjct: 539 SKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLT 597

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           AC+ H +    A A++++F+++ +N   YVL+S+++   G WE  +E R     RG+++ 
Sbjct: 598 ACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRL 657

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKY--EKIYDELRNLTAKMKSLGYVPDKSFV-LQDVEE 742
            G SSIE+ ++V  F   +   P +   +I+  L  L  +M+  GYVPD + V L+DVEE
Sbjct: 658 LGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEE 717

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
             KE+ +  HSE LA+  GIIS+P  +P++I KNLR+C DCH  TKF+S++  R I VRD
Sbjct: 718 GGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRD 777

Query: 803 SNRFHHFKDGICSCGDYW 820
             R HHF++G+CSCGDYW
Sbjct: 778 GRRHHHFENGVCSCGDYW 795



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 139/280 (49%), Gaps = 7/280 (2%)

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM----EDVIIGNAVVDMY 391
           M+   IQ ++    ++ +  + L      + VHG +MR         ++ ++ N V+ MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            + G  + A  VF+ +  ++V++W +LI+ +   G   +A+ +F+ M   + ++P++ T+
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKM-LLSGVSPDRITF 119

Query: 452 VSILPAYS-HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
            SIL  +S     L +G ++H+ +++     D  V   +V+MYGKCG ++ A ++F  + 
Sbjct: 120 TSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQ 179

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
             +   W  II+ +  +G   + L    +M   GV+PD  TF ++L AC+  G + E + 
Sbjct: 180 DPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN-FIQ 609
                    G+         +++L+G+ G L  A   F+Q
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQ 279


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/684 (39%), Positives = 400/684 (58%), Gaps = 77/684 (11%)

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           +L+S    ++  +P +L +C++L    +IH  ++  GF+    +   L+++Y  F   ++
Sbjct: 43  SLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDL 101

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR +FD  P      WN+MI  Y +S    EAL+                          
Sbjct: 102 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALE-------------------------- 135

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                   + +  + K GLE ++F+   L++MY+K G ++ A  VFD+M +RDVV+WN++
Sbjct: 136 --------MYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 187

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IA   QS DP  A   F  M     Q D    VS  +++A            G+    G 
Sbjct: 188 IAGLSQSEDPYVARRVFDQMVD---QDD----VSWGTMMA------------GYA-HNGC 227

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F+E       V++++ K+ + N              ++WN +I  Y QNG A EAI  F 
Sbjct: 228 FVE-------VLELFDKMKLGN--------------VTWNVIIAAYMQNGHAKEAISSFH 266

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M   N  +PN  T+VS+LPA +++ A R+G+  HA +I+     +  V   L+DMY KC
Sbjct: 267 QMRLEN-FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKC 325

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G++D +  LF ++    +V WNA++S + +HG GD+A+  F  M +  V+ D ++FVS+L
Sbjct: 326 GQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVL 385

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +AC H+GLV EG++ FH M +++ IKP L+HY CMVDL GRAG       FI+ MPV PD
Sbjct: 386 SACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD 445

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A +WGALLG+CR+H N++LG VA D L +++  N  ++V++S+IYA  G+W    + RS 
Sbjct: 446 AGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSK 505

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
             D GLKKTPG S +E+ NKV  F  G+++HP+ E ++     L  KM+ +GYVPD+S V
Sbjct: 506 MNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCV 565

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           LQ+VEE++KE  L SHSERLAI F ++++PP S IQI KNLRVC DCH  TKFIS+IT R
Sbjct: 566 LQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTR 625

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
            IIVRD+ RFHHF+DGICSC DYW
Sbjct: 626 RIIVRDATRFHHFEDGICSCNDYW 649



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 187/430 (43%), Gaps = 33/430 (7%)

Query: 21  QAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVF 80
           Q  R   S A  + +         +  + +  L  SC  L+ + ++HA ++VSG  K   
Sbjct: 26  QLRRSFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSG-FKHHH 84

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           S T L+N Y+       +R  FD     +   WNSMI  Y R  + +EA++ +Y      
Sbjct: 85  SITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG 144

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           GL  D +    ++     + D K+      K+  + DV    +++    +     VAR++
Sbjct: 145 GLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAGLSQSEDPYVARRV 203

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILD--------------------------- 233
           FD M  +D  SW  M++GY  +G  VE L++ D                           
Sbjct: 204 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAIS 263

Query: 234 ---EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
              +MRLE    + +T  S+LP  A       G+  H  I++ G   N  V N+LI+MYA
Sbjct: 264 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 323

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G + ++ ++F++M  +D VSWN++++ Y        A   F+ MQ++ +Q D ++ VS
Sbjct: 324 KCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 383

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           + S           R +   +  +     D+     +VD+  + G+ +      + +PV+
Sbjct: 384 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 443

Query: 411 -DVISWNTLI 419
            D   W  L+
Sbjct: 444 PDAGVWGALL 453


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/574 (44%), Positives = 362/574 (63%), Gaps = 3/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + SIL  CA   ++  G  +H   VK  + +     N L++MYAK G++  A+ VFD M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            R VV+W S+IAAY +      A   F  M + G+ PD+ T+ ++    A      N + 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH +I R      ++ + NA++DMYAK G +  A +VF  +PVKD+ISWNT+I GY++N 
Sbjct: 121 VHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           L +EA+ +F  M    E+ P+  T   ILPA + + +L +G ++H  +++N    D  VA
Sbjct: 180 LPNEALSLFGDM--VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
             LVDMY KCG    A  LF  +P    + W  +I+ +G+HG G+ A+  F +M   G+ 
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           PD ++F+S+L ACSHSGL+ EG R+F++MQ+E  +KP L+HY C+VDL  R+G L MA+ 
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
           FI++MP+ PDA+IWGALL  CRIH +++L    ++ +FE++ EN GYYVL++N YA   K
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           WE V ++R     RGLKK PG S IEV +KV IF  GN +HP+ +KI   L+ L +KMK 
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 477

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GY P   + L + +  +KE  L  HSE+LA+AFGI++ PP   I++ KNLRVCGDCH  
Sbjct: 478 EGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEM 537

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KFIS+   REI++RDSNRFHHFKDG+C C  +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 231/444 (52%), Gaps = 13/444 (2%)

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+AC N  D   G+ +H S +K    W      +LL MY + G+ + A  +FD M VR 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             +W ++I+ Y + G + EA+ +  EM  EGVS D  T+ ++L  CA + ++ +G  +H 
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           YI ++ ++ N+FV N L++MYAK G M  A  VF +M  +D++SWN++I  Y +++ P  
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M    ++PD  TL  +    A L      + VHG I+R G+F  D  + NA+V
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFF-SDQQVANALV 241

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMY K G+   A  +F+ +P KD+I+W  +I GY  +G  + AI  F  M +   I P++
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAG-IEPDE 300

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
            +++SIL A SH G L +G +    +   C +   +    C+VD+  + G++  A     
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360

Query: 508 QVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            +P    +  W A++S   IH     A      + +  + P++  +  LL   +++   +
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE--LEPENTGYYVLL---ANTYAEA 415

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGC 590
           E       ++++ G +   K+ GC
Sbjct: 416 EKWEEVKKLRQKIGRRGLKKNPGC 439



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 210/420 (50%), Gaps = 51/420 (12%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           KT F +T L++ YA  G L  +   FD +S R V TW S+I+ Y R G   EA+  F++ 
Sbjct: 32  KTTFCNT-LLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEM 90

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G+ PD +T   VL AC    +L +GK +H  + +   + ++FV  +L+ MY + G 
Sbjct: 91  D-REGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGS 149

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  +F +MPV+D  SWN MI GY ++    EAL +  +M LE +  D  T+A ILP 
Sbjct: 150 MEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPA 208

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           CA   ++  G  +H +I+++G   +  V+N L++MY K G+   A  +FD +  +D+++W
Sbjct: 209 CASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITW 268

Query: 314 NSIIAAYEQ---SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
             +IA Y      N+ IT    F  M+QAGI+PD ++ +S+      L  C      H  
Sbjct: 269 TVMIAGYGMHGFGNNAITT---FNEMRQAGIEPDEVSFISI------LYACS-----HSG 314

Query: 371 IMRRGWFMEDVIIGN-----------AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
           ++  GW   +V+               +VD+ A+ G +  A    + +P++ D   W  L
Sbjct: 315 LLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374

Query: 419 ITG---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYS------HVGALRQGI 468
           ++G   +    LA +  E VF++  E      N G YV +   Y+       V  LRQ I
Sbjct: 375 LSGCRIHHDVKLAEKVAEHVFELEPE------NTGYYVLLANTYAEAEKWEEVKKLRQKI 428



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 24/298 (8%)

Query: 46  REIDFDDLFQSCTKLHHV---------KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           RE    D+F   T LH           K +H  +  +     +F    L++ YA  G + 
Sbjct: 92  REGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSME 151

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +   F  +  +++ +WN+MI  Y +    +EA+  F    L   ++PD  T   +L AC
Sbjct: 152 DANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE--MKPDGTTLACILPAC 209

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
            +L     GK++H  +L+ GF  D  VA +L+ MY + G+  +AR LFD +P +D  +W 
Sbjct: 210 ASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWT 269

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI--- 270
            MI+GY   G    A+   +EMR  G+  D ++  SIL  C+ S  +  G      +   
Sbjct: 270 VMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDE 329

Query: 271 --VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND 325
             VK  LE    +    +++ A+ G +  A +    M +E D   W ++++     +D
Sbjct: 330 CNVKPKLEHYACI----VDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHD 383


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/748 (35%), Positives = 423/748 (56%), Gaps = 7/748 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K +FS+  ++  Y   G+LS +R  FD +  R   TW  +I  Y +  +  EA   F + 
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G+ PD  +   +L       ++ + +++H  V+KLG++  + V+ SLL  YC+   
Sbjct: 190 G-RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
             +A +LF+D+P RDS ++NA+++GY + G   EA+++  +M+  G      T A+IL  
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
             + D+I  G  +H ++VK    +N+FV+N L++ Y+K   +  A ++F +M E D +S+
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N ++  Y  +     +   F  +Q  G         +L SI A   +    R +H   + 
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV 428

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
                E +++GN++VDMYAK G    A  +F  L ++  + W  +I+ Y Q GL  + ++
Sbjct: 429 TDAISE-ILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLK 487

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  M+   +I  +  TY SI+ A + + +L  G ++H+ +I +    +VF  + LVDMY
Sbjct: 488 LFVEMQRA-KIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMY 546

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I DA+ +F ++P  +SV WNA+IS +  +G GD  L  F +M+  G++PD ++ +
Sbjct: 547 AKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLL 606

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L ACSH GLV EG +YF  M   + + P  +HY   +D+  R G    A   +  MP 
Sbjct: 607 SILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPF 666

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDE 672
            PD  +W ++L +C IH N EL   A+++LF +    +   YV MSNIYA  G+W+ V +
Sbjct: 667 EPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGK 726

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V+   R+RG+KK P +S +E+ +K  +F   ++THP+  +I  +L  L  KM   GY PD
Sbjct: 727 VKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPD 786

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            S  L +V+E+ K   L  HSER+AIAF +IS+P  SPI + KNLR C DCH   K IS+
Sbjct: 787 SSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISK 846

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  REI VRDS+RFHHF+DG C+C DYW
Sbjct: 847 IVRREITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 261/517 (50%), Gaps = 12/517 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     ++ V+++H+ ++  G   T+  S  L++ Y     L  +   F+ I  R+  T+
Sbjct: 208 FTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTF 267

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           N++++ Y + G   EA++ F++     G RP  +TF  +L A   L D   G+++H  V+
Sbjct: 268 NALLTGYSKEGFNREAINLFFKMQ-EVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K  F W+VFVA +LL  Y +      A KLF +MP  D  S+N +++ Y  +G   E+L+
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLE 386

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +  E++  G        A++L + A S N+  G  IH   +       + V N+L++MYA
Sbjct: 387 LFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYA 446

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G    A R+F  +  +  V W ++I++Y Q          F  MQ+A I  D  T  S
Sbjct: 447 KCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYAS 506

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +    A L      + +H  I+  G ++ +V  G+A+VDMYAK G I  A  +F+ +PV+
Sbjct: 507 IVRACASLASLTLGKQLHSHIIGSG-YISNVFSGSALVDMYAKCGSIKDALQMFQEMPVR 565

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           + +SWN LI+ YAQNG     + +F+ M     + P+  + +SIL A SH G + +G++ 
Sbjct: 566 NSVSWNALISAYAQNGDGDCTLRLFEEMVRSG-LQPDSVSLLSILCACSHCGLVEEGLQY 624

Query: 471 H---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGI 526
                R+ K     + + +T  +DM  + GR D+A  L  Q+P     + W+++++  GI
Sbjct: 625 FDSMTRIYKLVPKKEHYAST--IDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGI 682

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           H   + A     Q+ +  V  D   +V++    + +G
Sbjct: 683 HKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAG 719



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 262/534 (49%), Gaps = 49/534 (9%)

Query: 152 VLKAC-RNLVD---GKKIH----CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           ++K C RNLV      K H     S++K GF  + + +  L+  + + G  N ARKLFD+
Sbjct: 67  IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILD------------------------------ 233
           MP ++  S N MI GY +SGN  EA  + D                              
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186

Query: 234 -EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            EM   G+  D +++A++L      D++     +H +++K G +  L VSN+L++ Y K 
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  A ++F+ + ERD V++N+++  Y +      A   F  MQ+ G +P   T  ++ 
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL 306

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           +   QL+D    + VHGF+++   F+ +V + NA++D Y+K   +  A  +F  +P  D 
Sbjct: 307 TAGIQLDDIEFGQQVHGFVVKCN-FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDG 365

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           IS+N L+T YA NG   E++E+F+ ++     +     + ++L   +    L  G +IH+
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTG-FDRRNFPFATLLSIAAISLNLDIGRQIHS 424

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
           + I      ++ V   LVDMY KCG   +A  +F  +   SSVPW A+IS +   G  + 
Sbjct: 425 QTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHED 484

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCM 591
            L  F +M    +  D  T+ S++ AC+    ++ G Q + H++    G   ++     +
Sbjct: 485 GLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS--GYISNVFSGSAL 542

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           VD++ + G +  A    Q MPVR   S W AL+ A   +G+ +     + RLFE
Sbjct: 543 VDMYAKCGSIKDALQMFQEMPVRNSVS-WNALISAYAQNGDGD----CTLRLFE 591



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 14/321 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H+  +V+  I  +     LV+ YA  G+   +   F  ++ ++   W +MIS YV+ 
Sbjct: 420 RQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQK 479

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   + +  F +    + +  D  T+  +++AC +L     GK++H  ++  G+  +VF 
Sbjct: 480 GLHEDGLKLFVEMQ-RAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFS 538

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+ MY + G    A ++F +MPVR+S SWNA+IS Y Q+G+    L + +EM   G+
Sbjct: 539 GSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGL 598

Query: 241 SMDPITVASILPVCARSDNILSGL-----LIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
             D +++ SIL  C+    +  GL     +  +Y +    E   + S   I+M  + G  
Sbjct: 599 QPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEH--YAST--IDMLCRGGRF 654

Query: 296 RHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
             A ++  QM  E D + W+S++ +     +   A      +    +  D    V++++I
Sbjct: 655 DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714

Query: 355 VAQLNDCRNSRSVHGFIMRRG 375
            A   +  N   V   +  RG
Sbjct: 715 YAAAGEWDNVGKVKKAMRERG 735



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  + ++C  L  +   K+LH+ ++ SG I  VFS + LV+ YA  G +  +   F  + 
Sbjct: 504 YASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP 563

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RN  +WN++IS Y + G     +  F +  + SGL+PD  +   +L AC         H
Sbjct: 564 VRNSVSWNALISAYAQNGDGDCTLRLFEEM-VRSGLQPDSVSLLSILCACS--------H 614

Query: 167 CSVLKLGFEW-DVFVA-----------ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWN 213
           C +++ G ++ D               AS + M CR G  + A KL   MP   D   W+
Sbjct: 615 CGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWS 674

Query: 214 AMISGYCQSGN---AVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           ++++      N   A +A + L  M++   +   +T+++I       DN+
Sbjct: 675 SVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNV 724


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/761 (37%), Positives = 445/761 (58%), Gaps = 15/761 (1%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           SG +  +F  + LV+ +A  G LS++R  F+ +  RN  T N ++   VR     EA   
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296

Query: 133 FYQFTLTSGLRPDFY-----TFPPV-LKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLL 185
           F        + P+ Y     +FP   L     L  G+++H  V+  G  ++ V +   L+
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           +MY + G    AR++F  M  +DS SWN+MI+G  Q+G  +EA++    MR   +     
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T+ S L  CA       G  IH   +K G++ N+ VSN L+ +YA+ G +    ++F  M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476

Query: 306 MERDVVSWNSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
            E D VSWNSII A  +S   +  A   F   Q+AG + + +T  S+ S V+ L+     
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYA 423
           + +HG  ++     ++    NA++  Y K G ++    +F  +  + D ++WN++I+GY 
Sbjct: 537 KQIHGLALKNN-IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            N L ++A+++   M +  +   +   Y ++L A++ V  L +G+++HA  ++ CL  DV
Sbjct: 596 HNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM-LD 542
            V + LVDMY KCGR+D A+  F  +P  +S  WN++IS +  HGQG++AL  F  M LD
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
               PDH+TFV +L+ACSH+GL+ EG ++F  M + +G+ P ++H+ CM D+ GRAG L 
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774

Query: 603 MAHNFIQNMPVRPDASIWGALLGAC-RIHG-NMELGAVASDRLFEVDSENVGYYVLMSNI 660
              +FI+ MP++P+  IW  +LGAC R +G   ELG  A++ LF+++ EN   YVL+ N+
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA  G+WE + + R   +D  +KK  G+S + + + V +F  G+++HP  + IY +L+ L
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS-PIQIFKNLRV 779
             KM+  GYVP   F L D+E++ KE IL+ HSE+LA+AF + +    + PI+I KNLRV
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 954

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCH+  K+IS+I  R+II+RDSNRFHHF+DG CSC D+W
Sbjct: 955 CGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 299/610 (49%), Gaps = 27/610 (4%)

Query: 45  SREIDFDDLFQSCTKLHHV-----KRLHALLV-VSGKIKTVFSSTKLVNFYANLGDLSFS 98
           S +  F  + ++C ++  V     +++H L+  +S  +  V S+  +  ++  +G + ++
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
              F  I  +N  +WNS+ISVY + G    A   F       G RP  YTF  ++    +
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY-DGSRPTEYTFGSLVTTACS 218

Query: 159 LVDG-----KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
           L +      ++I C++ K G   D+FV + L+  + + G  + ARK+F+ M  R++ + N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDP---ITVASILPVCARSDNI--LSGLLIHL 268
            ++ G  +     EA  +  +M    + + P   + + S  P  + ++ +    G  +H 
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 269 YIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
           +++  GL +F + + N L+NMYAK G +  A RVF  M ++D VSWNS+I   +Q+   I
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   + +M++  I P   TL+S  S  A L   +  + +HG  ++ G  + +V + NA+
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSNAL 456

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA-SEAIEVFQMMEECNEINP 446
           + +YA+ G +N    +F  +P  D +SWN++I   A++  +  EA+  F   +   +   
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KL 515

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+ T+ S+L A S +     G +IH   +KN +  +      L+  YGKCG +D    +F
Sbjct: 516 NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF 575

Query: 507 YQVP-RSSSVPWNAIISCHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
            ++  R  +V WN++IS + IH +   KAL+    ML  G R D   + ++L+A +    
Sbjct: 576 SRMAERRDNVTWNSMISGY-IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVAT 634

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           +  G    H       ++  +     +VD++ + G L  A  F   MPVR   S W +++
Sbjct: 635 LERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMI 692

Query: 625 GACRIHGNME 634
                HG  E
Sbjct: 693 SGYARHGQGE 702



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 281/588 (47%), Gaps = 25/588 (4%)

Query: 55  QSCTKLHHVKRL-HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           QSC       R  H+ L  +   K V+    L+N Y   GD   +R  FD +  RN  +W
Sbjct: 11  QSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSW 70

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-----LVDGKKIHCS 168
             ++S Y R G   EA+  F +  +  G+  + Y F  VL+AC+      ++ G++IH  
Sbjct: 71  ACIVSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129

Query: 169 VLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           + KL +  D  V+  L+ MY +  G    A   F D+ V++S SWN++IS Y Q+G+   
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189

Query: 228 ALDILDEMRLEGVSMDPITVASILPV-CARSDNILSGL-LIHLYIVKHGLEFNLFVSNNL 285
           A  I   M+ +G      T  S++   C+ ++  +  L  I   I K GL  +LFV + L
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPD 344
           ++ +AK G + +A +VF+QM  R+ V+ N ++    +      A   F  M     + P+
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309

Query: 345 LLTLVSLTSI----VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
              ++ L+S     +A+    +  R VHG ++  G     V IGN +V+MYAK G I  A
Sbjct: 310 SYVIL-LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +  KD +SWN++ITG  QNG   EA+E ++ M   ++I P   T +S L + + 
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCAS 427

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +   + G +IH   +K  +  +V V+  L+ +Y + G +++   +F  +P    V WN+I
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487

Query: 521 ISCHGIHGQGDKALN----FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           I   G   + +++L      F      G + + ITF S+L+A S       G++  H + 
Sbjct: 488 I---GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLA 543

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            +  I         ++  +G+ G +         M  R D   W +++
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 238/473 (50%), Gaps = 18/473 (3%)

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  + K   + DV++  +L++ Y   G +  ARK+FD+MP+R+  SW  ++SGY ++G  
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNLFVSN 283
            EAL  L +M  EG+  +     S+L  C    S  IL G  IH  + K     +  VSN
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 284 NLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            LI+MY K  G + +AL  F  +  ++ VSWNSII+ Y Q+ D  +A   F++MQ  G +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 343 PDLLTLVSLTSIVAQLN--DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           P   T  SL +    L   D R    +   I + G  + D+ +G+ +V  +AK G ++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG-LLTDLFVGSGLVSAFAKSGSLSYA 262

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL---PA 457
             VF  +  ++ ++ N L+ G  +     EA ++F  M    +++P   +YV +L   P 
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPE 320

Query: 458 YS---HVGALRQGIKIHARVIKNCLC-FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           YS    VG L++G ++H  VI   L  F V +   LV+MY KCG I DA  +FY +    
Sbjct: 321 YSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
           SV WN++I+    +G   +A+  ++ M    + P   T +S L++C+       GQ+  H
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IH 438

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
               + GI  ++     ++ L+   G+L        +MP     S W +++GA
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F S   L     +HA  V +     V   + LV+ Y+  G L ++   F+ +  RN Y+W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           NSMIS Y R G+  EA+  F    L     PD  TF  VL AC         H  +L+ G
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS--------HAGLLEEG 740

Query: 174 FE 175
           F+
Sbjct: 741 FK 742


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 264/763 (34%), Positives = 440/763 (57%), Gaps = 11/763 (1%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            +++   ++ SG    +     L++ + N+G++ ++ + F+ IS R+  +WNS+++ Y + 
Sbjct: 281  RQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQN 340

Query: 124  GRLSEAVDCF-----YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDV 178
            G + E+   F     +   + S       T   VL    +   G+ IH  V+K+GF+  V
Sbjct: 341  GHIEESSRIFNLMRRFHDEVNS---TTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVV 397

Query: 179  FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
             V  +LL MY   G +  A  +F  MP +D  SWN++++ +   G +++AL IL  M   
Sbjct: 398  CVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRT 457

Query: 239  GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            G S++ +T  S L  C   +    G ++H  +V  GL  N  + N L++MY K G M  +
Sbjct: 458  GKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTS 517

Query: 299  LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             RV  QM  RDVV+WN++I  Y ++ DP  A   F T++  G+  + +T+VS+ S     
Sbjct: 518  RRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVP 577

Query: 359  NDC-RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
             D     + +H +I+  G F  D  + N+++ MYAK G ++S+  +F GL  + +I+WN 
Sbjct: 578  GDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNA 636

Query: 418  LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
            ++   A +G   E +++   M     ++ +Q ++   L A + +  L +G ++H   +K 
Sbjct: 637  ILAANAHHGHGEEVLKLVSKMRSFG-LSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 695

Query: 478  CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
                D F+     DMY KCG I + + +       S   WN +IS  G HG  ++    F
Sbjct: 696  GFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETF 755

Query: 538  RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
             +ML+ G++P H+TFVSLLTACSH GLV +G  Y+ M+ ++FG++P ++H  C++DL GR
Sbjct: 756  HEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGR 815

Query: 598  AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
            +G L  A  FI  MP++P+  +W +LL +C+IH +++ G  A++ L +++ E+   +VL 
Sbjct: 816  SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLS 875

Query: 658  SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
            SN++A  G+WE V+ VR     + +KK    S +++ +KV  F  G+RTHP+  +IY +L
Sbjct: 876  SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 935

Query: 718  RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             ++   +K  GYV D S  LQD +E++KEH L +HSERLA+A+ ++S+P  S ++IFKNL
Sbjct: 936  EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 995

Query: 778  RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            R+C DCH+  KF+S++  R I++RD  RFHHF+ G+CSC DYW
Sbjct: 996  RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 177/587 (30%), Positives = 305/587 (51%), Gaps = 12/587 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F   T+    + LHAL V      +V  +  L+N Y   G +  +R+ FD +  RN  +W
Sbjct: 68  FSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSW 127

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSV 169
           N+M+S  VR G   E ++ F+Q     G++P  +    ++ AC        +G ++H  V
Sbjct: 128 NTMMSGIVRVGLYLEGME-FFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 186

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
            K G   DV+V+ ++LH+Y  +GL + +RK+F++MP R+  SW +++ GY   G   E +
Sbjct: 187 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 246

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           DI   MR EGV  +  +++ ++  C    +   G  I   ++K GLE  L V N+LI+M+
Sbjct: 247 DIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMF 306

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
              G + +A  +F+Q+ ERD +SWNSI+AAY Q+     +   F  M++   + +  T+ 
Sbjct: 307 GNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVS 366

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           +L S++  ++  +  R +HG +++ G F   V + N ++ MYA  G    A  VF+ +P 
Sbjct: 367 TLLSVLGDVDHQKWGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPT 425

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD+ISWN+L+  +  +G + +A+ +   M    + + N  T+ S L A        +G  
Sbjct: 426 KDLISWNSLMASFVNDGRSLDALGILCSMIRTGK-SVNYVTFTSALAACFSPEFFDKGRI 484

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H  V+ + L  +  +   LV MYGK G +  +  +  Q+PR   V WNA+I  +  +  
Sbjct: 485 LHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENED 544

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH--MMQEEFGIKPHLKH 587
            DKAL  F+ +  EGV  ++IT VS+L+AC   G + E  +  H  ++   F    H+K+
Sbjct: 545 PDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKN 604

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
              ++ ++ + G L  + +    +  R   + W A+L A   HG+ E
Sbjct: 605 --SLITMYAKCGDLSSSQDLFNGLDNRSIIT-WNAILAANAHHGHGE 648



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 8/318 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LHA +V +G          L+  YA  GDLS S+  F+ +  R++ TWN++++ 
Sbjct: 581 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAA 640

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
               G   E +    +   + GL  D ++F   L A   L    +G+++H   +KLGFE 
Sbjct: 641 NAHHGHGEEVLKLVSKMR-SFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEL 699

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F+  +   MY + G      K+      R   SWN +IS   + G   E  +   EM 
Sbjct: 700 DCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEML 759

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMM 295
             G+    +T  S+L  C+    +  GL  +  I K  GLE  +     +I++  + G +
Sbjct: 760 EMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRL 819

Query: 296 RHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS--LT 352
             A     +M M+ + + W S++A+ +   D          + +   + D + ++S  + 
Sbjct: 820 AEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMF 879

Query: 353 SIVAQLNDCRNSRSVHGF 370
           +   +  D  N R   GF
Sbjct: 880 ATTGRWEDVENVRKQMGF 897


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/709 (38%), Positives = 408/709 (57%), Gaps = 38/709 (5%)

Query: 148 TFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDM 204
           T P ++  C N    K++H  +L+ G  +D   +A+ L   C        + A K+FD +
Sbjct: 32  TVPILIDKCANKKHLKQLHAHMLRTGLFFDP-PSATKLFTACALSSPSSLDYACKVFDQI 90

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSG 263
           P  +  +WN +I  +  S   ++ L +  +M  E     +  T   ++       ++L+G
Sbjct: 91  PRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAG 150

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             IH  ++K     +LF+SN+LI+ Y+  G +  A  VF +++E+D+VSWNS+I+ + Q 
Sbjct: 151 QAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQG 210

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
             P  A   F  M+    +P+ +T+V + S  A+  D    R    +I R G  + ++I+
Sbjct: 211 GSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI-NLIL 269

Query: 384 GNAVVDMY-------------------------------AKLGIINSACAVFEGLPVKDV 412
            NA++DMY                               AK+G  ++A  VF+ +P +D+
Sbjct: 270 SNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDI 329

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
            +WN LI+ Y QNG   EA+ +F+ ++      PN+ T  S L A + +GA+  G  IH 
Sbjct: 330 TAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHV 389

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            + K  +  +  + T L+DMY KCG ++ A+ +FY V R     W+A+I+   +HG G  
Sbjct: 390 YIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRA 449

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           A++ F +M +  V+P+ +TF +LL ACSHSGLV EG+ +F+ M+  +G+ P  KHY CMV
Sbjct: 450 AIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMV 509

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           D+ GRAG L  A   I+ MP+ P AS+WGALLGACRI+GN+EL  +A  RL E DS N G
Sbjct: 510 DILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHG 569

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
            YVL+SNIYA  GKW+ V  +R   +  GL+K PG SSIEVN  +  F  G+ +HP   +
Sbjct: 570 AYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTE 629

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEED-EKEHILTSHSERLAIAFGIISSPPKSPI 771
           IY +L  + A++KS GYV D+S +LQ VEE+  KEH L  HSE+LAIA+G+I   P  PI
Sbjct: 630 IYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPI 689

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLRVCGDCH+  K IS++  R+I++RD  RFHHF  G CSC DYW
Sbjct: 690 RIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 160/537 (29%), Positives = 272/537 (50%), Gaps = 53/537 (9%)

Query: 42  ENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSR 99
           E +S       L   C    H+K+LHA ++ +G      S+TKL    A  +   L ++ 
Sbjct: 25  EQKSNPSTVPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYAC 84

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--- 156
             FD I   N+YTWN++I  +    +  + +  F Q    S   P+ YTFP V+KA    
Sbjct: 85  KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
            +L+ G+ IH  V+K  F  D+F++ SL+H Y   G  + A  +F  +  +D  SWN+MI
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           SG+ Q G+  EAL +   M++E    + +T+  +L  CA+  ++  G     YI ++G++
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS------------------------ 312
            NL +SN +++MY K G +  A R+FD+M E+D+VS                        
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVM 324

Query: 313 -------WNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNS 364
                  WN++I++Y+Q+  P  A   F  +Q     +P+ +TL S  +  AQL      
Sbjct: 325 PREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG 384

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
             +H +I ++G  + +  I  +++DMY+K G +  A  VF  +  +DV  W+ +I G A 
Sbjct: 385 GWIHVYIKKQGIKL-NFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL--CFD 482
           +G    AI++F  M+E  ++ PN  T+ ++L A SH G + +G     R+  N +   + 
Sbjct: 444 HGHGRAAIDLFSKMQE-TKVKPNAVTFTNLLCACSHSGLVDEG-----RLFFNQMRPVYG 497

Query: 483 VFVAT----CLVDMYGKCGRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKA 533
           V   +    C+VD+ G+ G +++A+ L  ++P   S+SV W A++    I+G  + A
Sbjct: 498 VVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASV-WGALLGACRIYGNVELA 553


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/748 (37%), Positives = 411/748 (54%), Gaps = 95/748 (12%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + S   +++ Y   G+LS +R  F+ +  ++V +WN+M+S + + G + EA   F Q 
Sbjct: 120 RDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM 179

Query: 137 TLTSGLRPD----FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            + + +  +     Y     ++  R L D K           +W++     L+  Y R  
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFDSK----------MDWEIVSWNCLMGGYVRKK 229

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + AR LFD MPVRD  SWN MI+GY Q+G   EA  + +E+        PI       
Sbjct: 230 RLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL--------PIR------ 275

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
                                    ++F    +++ + + GM+  A R+F++M E++ VS
Sbjct: 276 -------------------------DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVS 310

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++IA Y QS     A   F  M                         RN+ S      
Sbjct: 311 WNAMIAGYVQSQQIEKARELFDQMPS-----------------------RNTSS------ 341

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
              W        N +V  YA+ G I+ A  +F+ +P +D ISW  +I+GYAQ+G + EA+
Sbjct: 342 ---W--------NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEAL 390

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  M+    I  N+      L + + + AL  G ++H R++K            L+ M
Sbjct: 391 HLFIKMKRDGGI-LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAM 449

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           YGKCG I++A  +F  +     V WN +I+ +  HG G +AL  F  M    ++PD +T 
Sbjct: 450 YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTL 508

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           V +L+ACSH+G V +G  YF+ M + +GI  + KHY CM+DL GRAG L  A N +++MP
Sbjct: 509 VGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
             PDA+ WGALLGA RIHG+ ELG  A++++FE++ +N G YVL+SN+YA  G+W  V E
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           +RS  RD+G+KK PG+S +E+ NK  IF  G+ +HP+ E+IY  L  L  ++K  G+V  
Sbjct: 629 MRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSS 688

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
              VL DVEE+EKEH+L  HSE+LA+AFGI+S PP  PI++ KNLRVC DCHN  K IS+
Sbjct: 689 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISK 748

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IT+R+IIVRDSNRFHHF +G CSCGDYW
Sbjct: 749 ITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 253/546 (46%), Gaps = 66/546 (12%)

Query: 68  ALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           AL V +G + ++  +   +++ Y +      +R  F+ +  R++ +WN M+S YV+ G L
Sbjct: 79  ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNL 138

Query: 127 SEAVDCFYQF---------TLTSGLRPDFYT------FPPVLKACRNLVDGKKIHCSVLK 171
           S A   F Q           + SG   + +       F  +L   +N +    +  + ++
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML--VKNEISWNGLLSAYVQ 196

Query: 172 LG------------FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            G             +W++     L+  Y R    + AR LFD MPVRD  SWN MI+GY
Sbjct: 197 NGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGY 256

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVAS------------ILPVCARSDNILSGLLIH 267
            Q+G   EA  + +E+ +  V      V+             I       + +    +I 
Sbjct: 257 AQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIA 316

Query: 268 LYIVKHGLE-----FNLFVS------NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
            Y+    +E     F+   S      N ++  YA+ G +  A  +FD+M +RD +SW ++
Sbjct: 317 GYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+ Y QS     A   F  M++ G   +   L    S  A++      + +HG +++ G 
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAG- 435

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F    I GNA++ MY K G I  A  VFE +  KD++SWNT+I GYA++G   EA+ +F+
Sbjct: 436 FQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFE 495

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGK 495
            M+    I P+  T V +L A SH G + +G++    + +N  +  +    TC++D+ G+
Sbjct: 496 SMKMT--IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGR 553

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHIT 551
            GR+D+A++L   +P    +  W A++    IHG    G+KA     +M      PD+  
Sbjct: 554 AGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM-----EPDNSG 608

Query: 552 FVSLLT 557
              LL+
Sbjct: 609 MYVLLS 614



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 26/179 (14%)

Query: 54  FQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
             SC ++  +   K+LH  LV +G      +   L+  Y   G +  +   F+ I+ +++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVL 170
            +WN+MI+ Y R G   EA+  F    +T  ++PD  T   VL AC         H   +
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESMKMT--IKPDDVTLVGVLSACS--------HTGFV 521

Query: 171 KLGFEW------DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMI 216
             G E+      +  + A+  H  C      R G  + A  L   MP   D+ +W A++
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALL 580


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 282/756 (37%), Positives = 419/756 (55%), Gaps = 99/756 (13%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-------------- 207
           GK IH  ++K G    VF+  +L++ Y + G    A ++FD+MPV+              
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 208 -----------------DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
                            DS SW AMI GY Q G    A+ +  EM  + V     T+ ++
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD------- 303
           L  CA  + +  G  +H ++VKHGL   + V+N+L+NMYAK G    A  VFD       
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 304 ------------------------QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQ 338
                                   QM+ERDVVSWN++I+ Y Q      A   F+ M   
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW---------------------- 376
           +  +PD  TL S  S  A L + +  + +H  I+R  +                      
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331

Query: 377 ---FME-------DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
               +E       DVI   A++D Y KLG IN A  +F+ L V+DV++W  +I GY QNG
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391

Query: 427 LASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
              +A+E+F+ M++E  +  PN  T  ++L   S + +L  G +IHA   ++     V V
Sbjct: 392 FNQDAMELFRSMIKEGPK--PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSV 449

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           +  L+ MY K G I+DA  +F  +  +  ++ W ++I     HG G++AL  F +ML+ G
Sbjct: 450 SNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENG 509

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           ++PDHIT+V +L+AC+H GLV +G+ Y+++MQ    I P   HY CM+DLFGRAG L  A
Sbjct: 510 IKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEA 569

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
           H FI+NMP+ PD   WG+LL +C++H N+EL  VA++RL  ++ EN G Y  ++N+Y+  
Sbjct: 570 HAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSAC 629

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G+WE    +R   +D+G+KK  G+S +++ NKV IF   +  HP+ + IY+ +  +  ++
Sbjct: 630 GQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEI 689

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           K +G+VPD   VL D+EE+ KE IL+ HSE+LAIAFG+I +P  + ++I KNLRVC DCH
Sbjct: 690 KKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCH 749

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +  KFIS++  REIIVRD+ RFHHFK+G+CSC DYW
Sbjct: 750 SAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 177/643 (27%), Positives = 279/643 (43%), Gaps = 152/643 (23%)

Query: 46  REIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           R + F D F         K +HA ++ +G    VF    L+NFYA  G +  +   FD +
Sbjct: 22  RSLKFKDPFTG-------KSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEM 74

Query: 106 SYRNVYTWN-------------------------------SMISVYVRCGRLSEAVDCFY 134
             ++V++WN                               +MI  Y + G+   A+  F 
Sbjct: 75  PVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFR 134

Query: 135 QFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR- 190
           +  ++  + P  +T   VL +C     L  G+K+H  V+K G    + VA SLL+MY + 
Sbjct: 135 EM-VSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKS 193

Query: 191 ------------------------------FGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                                          GL ++A+  F+ M  RD  SWNAMISGY 
Sbjct: 194 GDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYN 253

Query: 221 QSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           Q G   EALDI  +M ++  S  D  T+AS L  CA  +N+  G  IH +I++   EF+ 
Sbjct: 254 QHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIR--TEFDT 311

Query: 280 F--VSNNLINMYA---------------------------------KFGMMRHALRVFDQ 304
           F  V N LI+MY+                                 K G +  A R+FD 
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDS 371

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           +  RDVV+W ++I  Y Q+     A   F +M + G +P+  TL ++ S+ + L    + 
Sbjct: 372 LRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHG 431

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYA 423
           R +H    R G     V + NA++ MYAK G IN A  VF  +  K D I+W ++I   A
Sbjct: 432 RQIHASATRSG-NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALA 490

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCF 481
           Q+GL  EA+ +F+ M E N I P+  TYV +L A +HVG + QG + +  +++N   +  
Sbjct: 491 QHGLGEEALTLFERMLE-NGIKPDHITYVGVLSACTHVGLVEQG-RSYYNLMQNAHKIIP 548

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH------------- 527
                 C++D++G+ G + +A +    +P     + W ++++   +H             
Sbjct: 549 TPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERL 608

Query: 528 ---------------------GQGDKALNFFRQMLDEGVRPDH 549
                                GQ + A N  + M D+GV+ D 
Sbjct: 609 LLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQ 651



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/513 (24%), Positives = 211/513 (41%), Gaps = 101/513 (19%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           DP T  S L    +  +  +G  IH  I+K GL   +F+ NNL+N YAK G +  A RVF
Sbjct: 14  DPYT--SFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVF 71

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAH-------------------------------G 331
           D+M  + V SWN I++ Y +      AH                               G
Sbjct: 72  DEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIG 131

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  M    + P   TL ++ +  A +      R VH F+++ G     + + N++++MY
Sbjct: 132 MFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHG-LSSYISVANSLLNMY 190

Query: 392 AK-------------------------------LGIINSACAVFEGLPVKDVISWNTLIT 420
           AK                                G+++ A   FE +  +DV+SWN +I+
Sbjct: 191 AKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMIS 250

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK---- 476
           GY Q+G   EA+++F  M   +   P++ T  S L A +++  L+ G +IHA +I+    
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310

Query: 477 ------NCLC-----------------------FDVFVATCLVDMYGKCGRIDDAMSLFY 507
                 N L                         DV   T L+D Y K G I+ A  +F 
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD 370

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
            +     V W A+I  +  +G    A+  FR M+ EG +P++ T  ++L+  S    +  
Sbjct: 371 SLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDH 430

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G R  H      G    +     ++ ++ ++G +  A      +  + D   W +++ A 
Sbjct: 431 G-RQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIAL 489

Query: 628 RIHGNMELGAVASDRLFE--VDSENVGYYVLMS 658
             HG  E      +R+ E  +  +++ Y  ++S
Sbjct: 490 AQHGLGEEALTLFERMLENGIKPDHITYVGVLS 522


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/704 (38%), Positives = 407/704 (57%), Gaps = 36/704 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLFDDMPVRDS 209
           ++  C      K+IH  +L+ G  +D F A+ L+       F   + A+++FD +P  + 
Sbjct: 41  LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHL 268
            +WN +I  Y  S N  ++L I   M  +     D  T   ++   +  + + +G   H 
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHG 160

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            ++K  L  ++F+ N+LI+ YAK G +    RVF  +  RDVVSWNS+I A+ Q   P  
Sbjct: 161 MVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEE 220

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M+   ++P+ +T+V + S  A+ +D    R VH +I  R    E + + NA++
Sbjct: 221 ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI-ERNRIGESLTLSNAML 279

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA------------------------- 423
           DMY K G +  A  +F+ +P KD++SW T++ GYA                         
Sbjct: 280 DMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNA 339

Query: 424 ------QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
                 Q G   EA+E+F  ++      P++ T VS L A + +GA+  G  IH  + K 
Sbjct: 340 LISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQ 399

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            +  +  + T L+DMY KCG +  A+ +F+ V R     W+A+I+   +HG G  A+  F
Sbjct: 400 GMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALF 459

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +M ++ V+P+ +TF ++L ACSH GLV EG+ +F+ M+  +G+ P +KHY CMVD+ GR
Sbjct: 460 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGR 519

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG L  A   I+ MP+ P AS+WGALLGAC IH N+ L   A  +L E++  N G YVL+
Sbjct: 520 AGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLL 579

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SNIYA  GKW+ V  +R L RD GLKK PG SSIEV+  V  F  G+ +HP  +KIY +L
Sbjct: 580 SNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKL 639

Query: 718 RNLTAKMKSLGYVPDKSFVLQDV-EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
             + A+++++GYVP+KS +LQ V EED KE  L  HSE+LAIAFG+IS+    PI+I KN
Sbjct: 640 DEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKN 699

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH+  K +S++ +REI++RD  RFHHF++G CSC DYW
Sbjct: 700 LRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 266/517 (51%), Gaps = 47/517 (9%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L   C++   +K++HA ++ +G     FS+++L+   A      L +++  FD I + N+
Sbjct: 41  LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
           YTWN++I  Y       +++  F +    S   PD +TFP ++KA   L +   GK  H 
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHG 160

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            V+K+    DVF+  SL+H Y + G   +  ++F ++P RD  SWN+MI+ + Q G   E
Sbjct: 161 MVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEE 220

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL++  EM  + V  + IT+  +L  CA+  +   G  +H YI ++ +  +L +SN +++
Sbjct: 221 ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLD 280

Query: 288 MYAKFGMMRHALRVFDQMMERDVVS-------------------------------WNSI 316
           MY K G +  A R+FD+M E+D+VS                               WN++
Sbjct: 281 MYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNAL 340

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           I+AYEQ   P  A   F  +Q +   +PD +TLVS  S  AQL        +H +I ++G
Sbjct: 341 ISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQG 400

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
             + +  +  +++DMY K G +  A  VF  +  KDV  W+ +I G A +G   +AI +F
Sbjct: 401 MKL-NCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALF 459

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVD 491
             M+E +++ PN  T+ +IL A SHVG + +G     ++    L + V        C+VD
Sbjct: 460 SKMQE-DKVKPNAVTFTNILCACSHVGLVEEGRTFFNQME---LVYGVLPGVKHYACMVD 515

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
           + G+ G +++A+ L  ++P + +   W A++    IH
Sbjct: 516 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIH 552



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 214/471 (45%), Gaps = 52/471 (11%)

Query: 34  LQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYA 90
           L  SPD  +    +  F  L ++ ++L  +   K  H +++       VF    L++FYA
Sbjct: 127 LHQSPDFPD----KFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYA 182

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
             G+L      F +I  R+V +WNSMI+ +V+ G   EA++ F +   T  ++P+  T  
Sbjct: 183 KCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME-TQNVKPNGITMV 241

Query: 151 PVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            VL AC    D   G+ +H  + +      + ++ ++L MY + G    A++LFD MP +
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK 301

Query: 208 -------------------------------DSGSWNAMISGYCQSGNAVEALDILDEMR 236
                                          D  +WNA+IS Y Q G   EAL++  E++
Sbjct: 302 DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQ 361

Query: 237 LEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           L   +  D +T+ S L  CA+   +  G  IH+YI K G++ N  ++ +LI+MY K G +
Sbjct: 362 LSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDL 421

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           + AL VF  +  +DV  W+++IA          A   F+ MQ+  ++P+ +T  ++    
Sbjct: 422 QKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCAC 481

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS- 414
           + +      R+    +      +  V     +VD+  + G++  A  + E +P+    S 
Sbjct: 482 SHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASV 541

Query: 415 WNTLITGYA--QNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           W  L+      +N + +E     Q   +  E+ P N G YV +   Y+  G
Sbjct: 542 WGALLGACTIHENVVLAE-----QACSQLIELEPGNHGAYVLLSNIYAKAG 587


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/644 (41%), Positives = 375/644 (58%), Gaps = 35/644 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D  +A  L+  Y   G  +VAR +FD    ++   +N MI  Y  +   VEAL I   M 
Sbjct: 70  DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
               + D  T   +L  C+  DN+  GL +H  IVK GL+ NLF+ N L+ MY K G +R
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A +V DQM  RDVVSWNS++A Y QS     A      M    +  D  T+ SL+ +V 
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC 249

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                 N + +H                                  +FE +  K++ISWN
Sbjct: 250 -YTSLENVQYIHN---------------------------------MFERMTKKNLISWN 275

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +I  Y  N + +EA+ +F  MEEC  + P+  T  S+LPA   + AL  G ++H  + K
Sbjct: 276 VMIAIYVNNSMPNEAVSLFLQMEECG-MKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             L  ++ +   L+DMY KCG +++A  +F ++     V W +++S +G  GQG  A+  
Sbjct: 335 GNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F +MLD G  PD I FVS+L+ACSH+GL+ +G+ YF MM E++GI P ++H+ CMVDLFG
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFG 454

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG +  A++FI+ MP+ P+  +WGALL ACR+H  M++G VA+D LF++  +  GYYVL
Sbjct: 455 RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVL 514

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  G W+ V  VR   +  G+KK PG S++E+N +V  F  G++ HP+ + IY E
Sbjct: 515 LSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGE 574

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  L  KMK LGY+P     L DVE ++KE  L  HSE+LAI F I+++   +PI+I KN
Sbjct: 575 LDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKN 634

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH   K IS+I  R IIVRD NRFHHF +GICSCGDYW
Sbjct: 635 LRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 255/479 (53%), Gaps = 44/479 (9%)

Query: 63  VKRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           + +LH+ +V++  ++   + + KL+  Y+  G+ S +R+ FD    +NV  +N MI  YV
Sbjct: 54  LNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYV 113

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDV 178
                 EA+  F Q  L+    PD YTFP VLKAC    NL  G ++H +++K+G + ++
Sbjct: 114 NNNLYVEALSIF-QVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNL 172

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           F+  +L+ MY + G    ARK+ D MP RD  SWN+M++GY QSG   +AL+I  EM   
Sbjct: 173 FIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSL 232

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            ++ D  T+AS+ PV                                   Y     +++ 
Sbjct: 233 NLNHDAGTMASLSPVVC---------------------------------YTSLENVQYI 259

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +F++M +++++SWN +IA Y  ++ P  A   F  M++ G++PD +T+ SL      L
Sbjct: 260 HNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDL 319

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +     R +H +I  +G    ++++ NA++DMYAK G +  A  VF+ + ++DV+SW ++
Sbjct: 320 SALFLGRRLHKYI-EKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSM 378

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           ++ Y ++G   +A+ +F  M +  + NP+   +VS+L A SH G L QG + + R++   
Sbjct: 379 MSAYGRSGQGYDAVALFAKMLDSGQ-NPDSIAFVSVLSACSHTGLLDQG-RHYFRMMTEQ 436

Query: 479 LCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
                 +    C+VD++G+ G +++A S   Q+P   +   W A++S   +H + D  L
Sbjct: 437 YGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL 495



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 179/402 (44%), Gaps = 40/402 (9%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSS 82
           L+  A +  Q+   C  N      F  + ++C+ L +++   ++H  +V  G    +F  
Sbjct: 117 LYVEALSIFQVMLSCAFNPD-HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
             LV  Y   G L  +R   D + YR+V +WNSM++ Y + G+  +A             
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA------------- 222

Query: 143 RPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA--RKL 200
                     L+ C+ +            L    D    ASL  + C   L NV     +
Sbjct: 223 ----------LEICKEMDS----------LNLNHDAGTMASLSPVVCYTSLENVQYIHNM 262

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F+ M  ++  SWN MI+ Y  +    EA+ +  +M   G+  D +T+AS+LP C     +
Sbjct: 263 FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSAL 322

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H YI K  L+ NL + N L++MYAK G +  A  VFD+M  RDVVSW S+++AY
Sbjct: 323 FLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAY 382

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            +S     A   F  M  +G  PD +  VS+ S  +        R     +  +   +  
Sbjct: 383 GRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPR 442

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           +     +VD++ + G +  A +  + +P++ +   W  L++ 
Sbjct: 443 IEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 172/357 (48%), Gaps = 37/357 (10%)

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           ++   L  +  ++  L+  Y+  G    A  +FD+ +E++VV +N +I +Y  +N  + A
Sbjct: 62  VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M      PD  T   +    + L++ R    VH  I++ G    ++ IGNA+V 
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG-LDTNLFIGNALVA 180

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MY K G +  A  V + +P +DV+SWN+++ GYAQ+G   +A+E+ + M+  N +N + G
Sbjct: 181 MYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLN-LNHDAG 239

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T  S+ P   +  +L     IH                                ++F ++
Sbjct: 240 TMASLSPVVCYT-SLENVQYIH--------------------------------NMFERM 266

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
            + + + WN +I+ +  +   ++A++ F QM + G++PD +T  SLL AC     +  G+
Sbjct: 267 TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           R  H   E+  ++P+L     ++D++ + G L  A +    M +R D   W +++ A
Sbjct: 327 R-LHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-DVVSWTSMMSA 381



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 29/351 (8%)

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
           I+ Q    +    +H  I+       D  +   ++  Y+  G  + A  +F+    K+V+
Sbjct: 44  ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVV 103

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
            +N +I  Y  N L  EA+ +FQ+M  C   NP+  T+  +L A S +  LR G+++H  
Sbjct: 104 FFNVMIRSYVNNNLYVEALSIFQVMLSC-AFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           ++K  L  ++F+   LV MYGKCG + +A  +  Q+P    V WN++++ +   GQ D A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L   ++M    +  D  T  SL     ++ L  E  +Y H M E    K +L  +  M+ 
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFERM-TKKNLISWNVMIA 279

Query: 594 LFGRAGHLGMAHNFIQNMP---VRPDASIWGALLGAC----------RIHGNMELGAVAS 640
           ++        A +    M    ++PDA    +LL AC          R+H  +E G +  
Sbjct: 280 IYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQP 339

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           + L E           + ++YA  G  E   E R +     L+    W+S+
Sbjct: 340 NLLLE---------NALLDMYAKCGCLE---EARDVFDKMRLRDVVSWTSM 378


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 287/784 (36%), Positives = 424/784 (54%), Gaps = 108/784 (13%)

Query: 144 PDFYTFPPVLKACRNLVD-----------GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           P   +   +L+ C NL+             + +HC V+K G  + V++  +L+++Y + G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 193 LANVARKLFDDMPVR-------------------------------DSGSWNAMISGYCQ 221
            A  ARKLFD+MP+R                               DS SW  MI GY  
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G   +A+ ++ +M  EG+     T+ ++L   A +  + +G  +H +IVK GL  N+ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183

Query: 282 SNNLINMYAK-------------------------------FGMMRHALRVFDQMMERDV 310
           SN+L+NMYAK                                G M  A+  F+QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V+WNS+I+ + Q    + A   F+ M + + + PD  TL S+ S  A L      + +H 
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303

Query: 370 FIMRRGWFMEDVIIG--------------------------------NAVVDMYAKLGII 397
            I+  G+ +  +++                                  A++D Y KLG +
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           N A  +F  L  +DV++W  +I GY Q+G   EAI +F+ M    +  PN  T  ++L  
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSV 422

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
            S + +L  G +IH   +K+   + V V+  L+ MY K G I  A   F  +     +V 
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W ++I     HG  ++AL  F  ML EG+RPDHIT+V + +AC+H+GLV++G++YF MM+
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +   I P L HY CMVDLFGRAG L  A  FI+ MP+ PD   WG+LL ACR+H N++LG
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
            VA++RL  ++ EN G Y  ++N+Y+  GKWE   ++R   +D  +KK  G+S IEV +K
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V +F   + THP+  +IY  ++ +  ++K +GYVPD + VL D+EE+ KE IL  HSE+L
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           AIAFG+IS+P K+ ++I KNLRVC DCH   KFIS++  REIIVRD+ RFHHFKDG CSC
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782

Query: 817 GDYW 820
            DYW
Sbjct: 783 RDYW 786



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 208/479 (43%), Gaps = 77/479 (16%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H+ +V  G    V  S  L+N YA  GD   ++  FD +  R++ +WN+MI+++++ 
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225

Query: 124 GRLS-------------------------------EAVDCFYQFTLTSGLRPDFYTFPPV 152
           G++                                 A+D F +    S L PD +T   V
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD-----DM 204
           L AC NL     GK+IH  ++  GF+    V  +L+ MY R G    AR+L +     D+
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345

Query: 205 PV----------------------------RDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            +                            RD  +W AMI GY Q G+  EA+++   M 
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G   +  T+A++L V +   ++  G  IH   VK G  +++ VSN LI MYAK G + 
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465

Query: 297 HALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
            A R FD +  ERD VSW S+I A  Q      A   F TM   G++PD +T V + S  
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVIS 414
                    R     +      +  +     +VD++ + G++  A    E +P++ DV++
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585

Query: 415 WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           W +L++    +    L   A E   ++E       N G Y ++   YS  G   +  KI
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEP-----ENSGAYSALANLYSACGKWEEAAKI 639



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 13/166 (7%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWNSMISVY 120
           H K++H   V SG+I +V  S  L+  YA  G+++ +   FD I   R+  +W SMI   
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWDV 178
            + G   EA++ F +  L  GLRPD  T+  V  AC +  LV+  + +  ++K   + D 
Sbjct: 491 AQHGHAEEALELF-ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK---DVDK 546

Query: 179 FVA-----ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
            +      A ++ ++ R GL   A++  + MP+  D  +W +++S 
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/683 (40%), Positives = 400/683 (58%), Gaps = 45/683 (6%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDV-FVAASLLHMYCRFGLANVARKLFDD---- 203
           +  +L+ C +L   K IH S+   GF        A L+ +Y + G  + AR LFD     
Sbjct: 28  YDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 204 ----MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
                   +S   N M+  Y  +G + EA+D+   M+  GV ++  T   +L VCA    
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELG 147

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
            + G ++H  +V+ G   +LFV   L++MYAK G +  A  VFD+M+ RDVV W ++I  
Sbjct: 148 AVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITL 207

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           YEQ+  P+ A   F  MQ+ G   D +T +S+ S V QL D R +               
Sbjct: 208 YEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA--------------- 252

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
                            I+ A  VF+ +  ++ ISWN++++GY QNG  ++A+ +F  M+
Sbjct: 253 -----------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 295

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             +E +PN  T + ++ A S++G+   G K+H  VI + +  D  +   ++DMY KCG +
Sbjct: 296 -ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDL 354

Query: 500 DDAMSLFY--QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           D A+ +F   ++       WN +IS +G+HG G +AL  F +M  EGV P+ ITF S+L+
Sbjct: 355 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 414

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSH+GL+ EG++ F  M +   ++P +KHY CMVD+ GRAG L  A   I+ +P RP  
Sbjct: 415 ACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 473

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            +WGALL ACRIHGN ELG +A++ LF+++ E+ GYYVLMSNIYA   KW+ V+ VR   
Sbjct: 474 EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNM 533

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           + RGLKK   +S IE   +V  F+T +++ P Y ++Y ++ +L  +MK +GYVPD S VL
Sbjct: 534 KSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVL 593

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            DVE ++KEH+L  HSE+LA+AFGI+      PIQ+ KNLRVC DCH   KFIS I  R+
Sbjct: 594 HDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRK 653

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           IIVRD NRFHHF+ G CSCGDYW
Sbjct: 654 IIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 162/526 (30%), Positives = 258/526 (49%), Gaps = 57/526 (10%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           +D L Q CT L  +K +H+ L   G  + T     +L+  Y+ LGDL  +R  FDH  + 
Sbjct: 28  YDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 109 --------NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
                   N +  N+M+  Y   GR  EA+D  Y +    G+  + +T+P VLK C +  
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAID-LYIYMQRMGVGVNNFTYPFVLKVCASEL 146

Query: 159 -LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             V G+ +H  V++ GF  D+FV A+L+ MY + G    A ++FD M +RD   W AMI+
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y Q+   ++AL +  +M+ EG   D IT  S+     +  +                  
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD------------------ 248

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
                        +  + R  L VFD+M ER+ +SWNS+++ Y Q+  P  A   F  MQ
Sbjct: 249 ------------GRMAISRARL-VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 295

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            +   P+ +T + + S  + L      R +H F++     + D  + NA++DMY K G +
Sbjct: 296 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDI-DTTLRNAIMDMYMKCGDL 354

Query: 398 NSACAVFEG--LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           ++A  +F    L  +DV SWN LI+GY  +G   EA+E+F  M +   + PN  T+ SIL
Sbjct: 355 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM-QVEGVEPNDITFTSIL 413

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            A SH G + +G K  A + K  +  ++    C+VDM G+ G +++A  L  ++P R S 
Sbjct: 414 SACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 473

Query: 515 VPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLT 557
             W A++    IHG    G+ A N   Q+      P+H  +  L++
Sbjct: 474 EVWGALLLACRIHGNTELGEIAANNLFQL-----EPEHTGYYVLMS 514


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 293/831 (35%), Positives = 441/831 (53%), Gaps = 82/831 (9%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           SC  L   +RL   L    K   V +   ++N YA  G LS +   FD +  R+V +WN+
Sbjct: 51  SCGALSDARRL---LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNT 107

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 175
           ++S Y +  R  + ++ F     +    P+ +TF  V+K+C  L   +++   +L L ++
Sbjct: 108 LMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGAL-GCRELAPQLLGLFWK 166

Query: 176 WDVF----VAASLLHMYCRFGLANVARKLF------------------------------ 201
           +D +    V  +L+ M+ R G  + A +LF                              
Sbjct: 167 FDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEY 226

Query: 202 -DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            +DM  RD  SWN MI+   QSG   EAL ++ EM  +GV +D  T  S L  CAR  ++
Sbjct: 227 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 286

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H  +++   + + +V++ LI +YAK G  + A RVF+ + +R+ VSW  +I   
Sbjct: 287 GWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGS 346

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q      +   F  M+   +  D   L +L S      D    R +H   ++ G     
Sbjct: 347 LQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG-HNRA 405

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +++ N+++ +YAK G + +A  VF  +  +D++SW ++IT Y+Q G   +A E F  M+ 
Sbjct: 406 IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDT 465

Query: 441 CN-------------------------------EINPNQGTYVSILPAYSHVGALRQGIK 469
            N                               ++ P+  TYV++    + +GA + G +
Sbjct: 466 RNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQ 525

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           I    +K  L  +V VA   + MY KCGRI +A  LF  +     V WNA+I+ +  HG 
Sbjct: 526 IIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGM 585

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +A   F  ML +G +PD+I++V++L+ CSHSGLV EG+ YF MM    GI P L+H+ 
Sbjct: 586 GKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFS 645

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GRAGHL  A + I  MP++P A +WGALL AC+IHGN EL  +A+  +FE+DS 
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSP 705

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + G Y+L++ IY++ GK +   +VR L RD+G+KK PG+S +EV NKV +F   + +HP+
Sbjct: 706 DSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQ 765

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
              I ++L  L  K+  LGYV           E  +  I   HSE+LA+AFGI+S P   
Sbjct: 766 VIAIRNKLDELMEKIAHLGYVR---------TESPRSEI--HHSEKLAVAFGIMSLPAWM 814

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PI I KNLR+CGDCH   K IS +T+RE ++RD  RFHHFK G CSCGDYW
Sbjct: 815 PIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 286/577 (49%), Gaps = 50/577 (8%)

Query: 47  EIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           E    D+F  C  +    RL + +    +  T+F    ++  YA L  +  +   F+ ++
Sbjct: 176 ETALVDMFVRCGYVDFASRLFSQI----ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 231

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+V +WN MI+   + GR+ EA+    +     G+R D  T+   L AC  L     GK
Sbjct: 232 ERDVVSWNMMIAALSQSGRVREALGLVVEMH-RKGVRLDSTTYTSSLTACARLFSLGWGK 290

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V++   + D +VA++L+ +Y + G    A+++F+ +  R+S SW  +I G  Q  
Sbjct: 291 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 350

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +++++ ++MR E +++D   +A+++  C    ++  G  +H   +K G    + VSN
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 410

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM------- 336
           +LI++YAK G +++A  VF  M ERD+VSW S+I AY Q  + I A  FF  M       
Sbjct: 411 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAIT 470

Query: 337 -------------------------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
                                     Q  + PD +T V+L    A +   +    + G  
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G  + +V + NA + MY+K G I+ A  +F+ L  KDV+SWN +ITGY+Q+G+  +A
Sbjct: 531 VKAGLIL-NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQA 589

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG---IKIHARVIKNCLCFDVFVATC 488
            + F  M       P+  +YV++L   SH G +++G     +  RV       + F  +C
Sbjct: 590 AKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF--SC 646

Query: 489 LVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
           +VD+ G+ G + +A  L  ++P + ++  W A++S   IHG  D+      + + E   P
Sbjct: 647 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN-DELAELAAKHVFELDSP 705

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           D  +++ L    S +G   +  +   +M+++ GIK +
Sbjct: 706 DSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK-GIKKN 741


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 292/785 (37%), Positives = 449/785 (57%), Gaps = 22/785 (2%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           + F  + ++C +L  +   + +HA +V SG K K+V ++  L++ Y + G ++ +   F+
Sbjct: 129 VTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANL-LLHIYGSCGCVASAMLLFE 187

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            +  R++ +WN+ I+   + G L  A++ F +  L  G+RP   T    L  C  +   +
Sbjct: 188 KME-RDLVSWNAAIAANAQSGDLGIALELFQRMQL-EGVRPARITLVIALTVCATIRQAQ 245

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH  V + G E  + V+ +L   Y R G    A+++FD    RD  SWNAM+  Y Q G
Sbjct: 246 AIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHG 305

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  EA  +   M  EG+S   +T+ +    C+   ++  G +IH   ++ GL+ ++ + N
Sbjct: 306 HMSEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGN 362

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L++MY + G    A  +F ++   + VSWN++IA   Q      A   F  MQ  G+ P
Sbjct: 363 ALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAP 421

Query: 344 DLLTLVSLTSIVA----QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
              T ++L   VA    +       R +H  I+  G+  E  I G AVV MYA  G I+ 
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI-GTAVVKMYASCGAIDE 480

Query: 400 ACAVFEGLPVKD---VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           A A F+   ++D   V+SWN +I+  +Q+G    A+  F+ M+  + + PNQ T V++L 
Sbjct: 481 AAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD-LHGVAPNQITCVAVLD 539

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
           A +   AL +G  +H  +  + +  ++FVAT L  MYG+CG ++ A  +F +V      V
Sbjct: 540 ACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVV 599

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            +NA+I+ +  +G   +AL  F +M  EG RPD  +FVS+L+ACSH GL  EG   F  M
Sbjct: 600 IFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSM 659

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           ++ +GI P   HY C VD+ GRAG L  A   I+ M V+P   +W  LLGACR + +++ 
Sbjct: 660 RQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDR 719

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G +A+  + E+D  +   YV++SNI A  GKW+   EVR+    RGL+K  G S IE+ +
Sbjct: 720 GRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKS 779

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           +V  F  G+R+HP+ E+IY EL  L A+++ +GYVPD   VL+ V+E EKE +L  HSER
Sbjct: 780 RVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSER 839

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAIA G++SS   + +++ KNLRVC DCHN TKFIS+I  +EI+VRD++RFHHF DG CS
Sbjct: 840 LAIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCS 898

Query: 816 CGDYW 820
           CGDYW
Sbjct: 899 CGDYW 903



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 194/577 (33%), Positives = 297/577 (51%), Gaps = 24/577 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +R+HA +V  G  + +     L+  Y     L      F  +  R+  +W ++I+ 
Sbjct: 45  LSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y   G+   A+  F++     G+R D  TF  VLKAC  L D   G+ IH  +++ G + 
Sbjct: 103 YTEHGQAKRAIGMFHRMQ-QEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKG 161

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
              +A  LLH+Y   G    A  LF+ M  RD  SWNA I+   QSG+   AL++   M+
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQ 220

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           LEGV    IT+   L VCA    I     IH  + + GLE  L VS  L + YA+ G + 
Sbjct: 221 LEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLY 277

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  VFD+  ERDVVSWN+++ AY Q      A   F  M   GI P  +TLV+ ++  +
Sbjct: 278 QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS 337

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L   R  R +HG  + +G    D+++GNA++DMY + G    A  +F+ +P  + +SWN
Sbjct: 338 SL---RFGRMIHGCALEKG-LDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWN 392

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS----HVGALRQGIKIHA 472
           T+I G +Q G    A+E+FQ M +   + P + TY+++L A +       A+ +G K+H+
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRM-QLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHS 451

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP---RSSSVPWNAIISCHGIHGQ 529
           R++      +  + T +V MY  CG ID+A + F +     R   V WNAIIS    HG 
Sbjct: 452 RIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +AL FFR+M   GV P+ IT V++L AC+ +  ++EG+   H      G++ +L    
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGE-IVHDHLRHSGMESNLFVAT 570

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            +  ++GR G L  A    + + V  D  I+ A++ A
Sbjct: 571 ALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 150/483 (31%), Positives = 256/483 (53%), Gaps = 21/483 (4%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R L  G++IH  ++ LG E ++     LL +Y +        ++F  + VRD  SW  +I
Sbjct: 43  RLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTII 100

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           + Y + G A  A+ +   M+ EGV  D +T  ++L  CAR  ++  G  IH +IV+ GL+
Sbjct: 101 TAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLK 160

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
               ++N L+++Y   G +  A+ +F++ MERD+VSWN+ IAA  QS D   A   F  M
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLFEK-MERDLVSWNAAIAANAQSGDLGIALELFQRM 219

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  G++P  +TLV   ++ A +   R ++++H FI+R     + +++  A+   YA+LG 
Sbjct: 220 QLEGVRPARITLVIALTVCATI---RQAQAIH-FIVRESGLEQTLVVSTALASAYARLGH 275

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSIL 455
           +  A  VF+    +DV+SWN ++  YAQ+G  SEA  +F +M+ E   I+P++   V+++
Sbjct: 276 LYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE--GISPSK---VTLV 330

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A +   +LR G  IH   ++  L  D+ +   L+DMY +CG  ++A  LF ++P  ++V
Sbjct: 331 NASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAV 389

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS----HSGLVSEGQRY 571
            WN +I+     GQ  +A+  F++M  EG+ P   T+++LL A +     +  ++EG R 
Sbjct: 390 SWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEG-RK 448

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN--MPVRPDASIWGALLGACRI 629
            H      G          +V ++   G +  A    Q   M  R D   W A++ +   
Sbjct: 449 LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQ 508

Query: 630 HGN 632
           HG+
Sbjct: 509 HGH 511



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 5/182 (2%)

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           V +L A      L QG +IHAR++   L  +  +   L+ +Y KC  + D   +F ++  
Sbjct: 33  VRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVEEVFSRLEV 90

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
                W  II+ +  HGQ  +A+  F +M  EGVR D +TF+++L AC+  G +S+G R 
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG-RS 149

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    E G+K        ++ ++G  G +  A    + M    D   W A + A    G
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME--RDLVSWNAAIAANAQSG 207

Query: 632 NM 633
           ++
Sbjct: 208 DL 209


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/643 (41%), Positives = 391/643 (60%), Gaps = 5/643 (0%)

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           F+    ++    FG  N A K F ++   D   WNA+I GY Q       + +  +M++ 
Sbjct: 20  FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V  +  T   +L  C  +     G  IH    K+G   N+FV N+L++MYAKFG + +A
Sbjct: 80  QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VFD++ +R VVSW SII+ Y Q+ DP+ A   F  M+Q  ++PD + LVS+ +    +
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199

Query: 359 NDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            D    +S+HG + + G  F  D++I  ++  MYAK G++  A   F  +   ++I WN 
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 257

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I+GYA NG   EAI++F+ M   N I  +  T  S + A + VG+L     +   + K+
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKN-IRVDSITMRSAVLASAQVGSLELARWLDGYISKS 316

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               D FV T L+DMY KCG I  A  +F +V     V W+ +I  +G+HG G +A+  +
Sbjct: 317 EYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLY 376

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +M   GV P+  TF+ LLTAC +SGLV EG   FH+M +  GI+PH +HY C+VDL GR
Sbjct: 377 NEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH-GIEPHHQHYSCVVDLLGR 435

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG+L  A++FI +MP++P  S+WGALL AC+IH  + LG +A+++LF +D  N G+YV +
Sbjct: 436 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQL 495

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN+YA+   W  V  VR +   +GL K  G SSIE+N  ++ F  G+R+HPK ++I++EL
Sbjct: 496 SNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEEL 555

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L  ++K+ GYVP    VL D+  +E E  L  HSERLA+A+GIIS+ P + ++I KNL
Sbjct: 556 DRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNL 615

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           R C +CH+  K IS++ +REII+RD+ RFHHFKDG+CSCGD+W
Sbjct: 616 RACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 246/470 (52%), Gaps = 7/470 (1%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           H+ +++  L+VSG  K  F   K +N   + GD++++   F  +S  ++  WN++I  Y 
Sbjct: 2   HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYT 61

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDV 178
           +   +   +  +    + S + P+ +TF  VLKAC        GK+IH    K GF  +V
Sbjct: 62  QKNIVDAPIRMYMDMQI-SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV  SL+ MY +FG  + AR +FD +  R   SW ++ISGY Q+G+ +EAL++  EMR  
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 180

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V  D I + S++      +++  G  IH  + K GLEF   +  +L  MYAK G++  A
Sbjct: 181 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 240

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
              F++M + +++ WN++I+ Y  +     A   F  M    I+ D +T+ S     AQ+
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                +R + G+I  +  + +D  +   ++DMYAK G I  A  VF+ +  KDV+ W+ +
Sbjct: 301 GSLELARWLDGYI-SKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVM 359

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I GY  +G   EAI ++  M++   + PN GT++ +L A  + G +++G ++   +  + 
Sbjct: 360 IMGYGLHGHGQEAICLYNEMKQAG-VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHG 418

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
           +       +C+VD+ G+ G ++ A      +P    V  W A++S   IH
Sbjct: 419 IEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/740 (36%), Positives = 420/740 (56%), Gaps = 7/740 (0%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +V+ Y    +L  +R  F+ +  RN  +W  MI  Y +  +  EA + + +    SG++P
Sbjct: 83  MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC-RSGVKP 141

Query: 145 DFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D  TF  +L    +    K   +IH  +++ GF   + V  SL+  YC+    ++A +LF
Sbjct: 142 DHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLF 201

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
            +MP +DS S+N MI+GY + G   EAL +  +MR         T A++L +   S++++
Sbjct: 202 SEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVI 261

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  IH   +K    +++FV+N L++ Y+K   +  A  +FD+M E D VS+N II  Y 
Sbjct: 262 FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYA 321

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            +     +   F  +Q            ++ S+ A   +    R  H   +      E V
Sbjct: 322 WNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE-V 380

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            +GNA+VDMYAK      A  +F  L  ++ + W  +I+ Y Q G   EA+++F+ M   
Sbjct: 381 QVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRE 440

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N ++ +Q T+ S L A +++ ++  G ++H+ VI+  L   VF  + LVDMY  CG + D
Sbjct: 441 N-VHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKD 499

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A+ +F ++P  + V WNA+IS +  +G  +   + F  M++ G+ PD ++F+S+LTACSH
Sbjct: 500 AIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSH 559

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            GLV +   YF+ M + + + P  KHY  M+D+  R+G    A N I  MP  PD  +W 
Sbjct: 560 RGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWS 619

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           ++L +CRIH N +L   A+D+LF++D+  +   YV MSNIYA  GKWE   +V+   R+R
Sbjct: 620 SVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRER 679

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+KK   +S +E++++V +F   +RTHP+ E+I  ++ +L   M   GY PD S  LQ+V
Sbjct: 680 GVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNV 739

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           +E+ K   L  HSERLAIAF +I++P  SPI I KNLR C DCH   K IS+I  REI V
Sbjct: 740 DEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITV 799

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RDS+RFHHF+DG CSCGDYW
Sbjct: 800 RDSSRFHHFRDGSCSCGDYW 819



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 233/501 (46%), Gaps = 35/501 (6%)

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG-------------- 210
           +   ++K GF+ ++      L    R      AR+LFD+MP R++               
Sbjct: 33  VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92

Query: 211 -----------------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
                            SW  MI GY Q+    EA ++  EM   GV  D IT A++L  
Sbjct: 93  LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
              +  +   L IH +I++ G   +L V N+L++ Y K   +  A ++F +M  +D VS+
Sbjct: 153 FDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSF 212

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N +I  Y +      A   F  M+    QP   T  ++  +     D    + +HG  ++
Sbjct: 213 NVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIK 272

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
              ++ D+ + NA++D Y+K   I+ A  +F+ +P  D +S+N +ITGYA NG   ++ +
Sbjct: 273 TS-YVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFD 331

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F+ ++  +  +     + ++L   +    L  G + HA+ +      +V V   LVDMY
Sbjct: 332 LFKRLQGTS-FDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMY 390

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KC + +DA  +F  +   +SVPW AIIS +   G  ++AL  F++M  E V  D  TF 
Sbjct: 391 AKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFA 450

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S L A ++   VS G++  H      G+   +     +VD++   G +  A    + MP 
Sbjct: 451 STLKASANLASVSLGKQ-LHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPD 509

Query: 614 RPDASIWGALLGACRIHGNME 634
           R +   W AL+ A   +G+ E
Sbjct: 510 R-NIVCWNALISAYSQNGDAE 529



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 197/423 (46%), Gaps = 30/423 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H L + +  +  +F +  L++FY+    +  +++ FD +   +  ++N +I+ Y   
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323

Query: 124 GRLSEAVDCFYQFTLTSGLRPD--FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVA 181
           G+  ++ D F +   TS  R +  F T   V     NL  G++ H   +      +V V 
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVG 383

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L+ MY +      A ++F ++  R+S  W A+IS Y Q G   EAL +  EM  E V 
Sbjct: 384 NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVH 443

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D  T AS L   A   ++  G  +H  +++ GL  ++F  + L++MYA  G M+ A+ V
Sbjct: 444 GDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEV 503

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +M +R++V WN++I+AY Q+ D       F  M ++G+ PD ++ +S+      L  C
Sbjct: 504 FKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSV------LTAC 557

Query: 362 RNSRSVHGFIMRRGWFMEDVII----------GNAVVDMYAKLGIINSACAVFEGLPVK- 410
               S  G + +  W+   +               ++D+  + G  N A  +   +P + 
Sbjct: 558 ----SHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEP 613

Query: 411 DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           D + W++++     +    LA +A +    M+   +       YV++   Y+  G     
Sbjct: 614 DEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRD----AAAYVNMSNIYAEAGKWENA 669

Query: 468 IKI 470
            K+
Sbjct: 670 AKV 672



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 143/317 (45%), Gaps = 6/317 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++ HA  VV+  +  V     LV+ YA       +   F +++YRN   W ++IS+YV+ 
Sbjct: 365 RQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQK 424

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   EA+  F +      +  D  TF   LKA  NL     GK++H SV++LG    VF 
Sbjct: 425 GFHEEALKMFKEMN-RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFS 483

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            + L+ MY   G    A ++F +MP R+   WNA+IS Y Q+G+A        +M   G+
Sbjct: 484 GSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGL 543

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHAL 299
             D ++  S+L  C+    +   L     + + + L+        +I++  + G    A 
Sbjct: 544 YPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAE 603

Query: 300 RVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +  +M  E D V W+S++ +     +   A      + +     D    V++++I A+ 
Sbjct: 604 NLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEA 663

Query: 359 NDCRNSRSVHGFIMRRG 375
               N+  V   +  RG
Sbjct: 664 GKWENAAKVKKAMRERG 680


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/644 (41%), Positives = 375/644 (58%), Gaps = 35/644 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D  +A  L+  Y   G  +VAR +FD    ++   +N MI  Y  +   VEAL I   M 
Sbjct: 70  DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
               + D  T   +L  C+  DN+  GL +H  IVK GL+ NLF+ N L+ MY K G +R
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A +V DQM  RDVVSWNS++A Y QS     A      M    +  D  T+ SL+ +V 
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC 249

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                 N + +H                                  +FE +  K++ISWN
Sbjct: 250 -YTSLENVQYIHN---------------------------------MFERMTKKNLISWN 275

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +I  Y  N + +EA+ +F  MEEC  + P+  T  S+LPA   + AL  G ++H  + K
Sbjct: 276 VMIAIYVNNSMPNEAVSLFLQMEECG-MKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             L  ++ +   L+DMY KCG +++A  +F ++     V W +++S +G  GQG  A+  
Sbjct: 335 GNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F +MLD G  PD I FVS+L+ACSH+GL+ +G+ YF MM E++GI P ++H+ CMVDLFG
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFG 454

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG +  A++FI+ MP+ P+  +WGALL ACR+H  M++G VA+D LF++  +  GYYVL
Sbjct: 455 RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVL 514

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  G W+ V  VR   +  G+KK PG S++E+N +V  F  G++ HP+ + IY E
Sbjct: 515 LSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGE 574

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  L  KMK LGY+P     L DVE ++KE  L  HSE+LAI F I+++   +PI+I KN
Sbjct: 575 LDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKN 634

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH   K IS+I  R IIVRD NRFHHF +GICSCGDYW
Sbjct: 635 LRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 255/479 (53%), Gaps = 44/479 (9%)

Query: 63  VKRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           + +LH+ +V++  ++   + + KL+  Y+  G+ S +R+ FD    +NV  +N MI  YV
Sbjct: 54  LNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYV 113

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDV 178
                 EA+  F Q  L+    PD YTFP VLKAC    NL  G ++H +++K+G + ++
Sbjct: 114 NNNLYVEALSIF-QVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNL 172

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           F+  +L+ MY + G    ARK+ D MP RD  SWN+M++GY QSG   +AL+I  EM   
Sbjct: 173 FIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSL 232

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            ++ D  T+AS+ PV                                   Y     +++ 
Sbjct: 233 NLNHDAGTMASLSPVVC---------------------------------YTSLENVQYI 259

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +F++M +++++SWN +IA Y  ++ P  A   F  M++ G++PD +T+ SL      L
Sbjct: 260 HNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDL 319

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +     R +H +I  +G    ++++ NA++DMYAK G +  A  VF+ + ++DV+SW ++
Sbjct: 320 SALFLGRRLHKYI-EKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSM 378

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           ++ Y ++G   +A+ +F  M +  + NP+   +VS+L A SH G L QG + + R++   
Sbjct: 379 MSAYGRSGQGYDAVALFAKMLDSGQ-NPDSIAFVSVLSACSHTGLLDQG-RHYFRMMTEQ 436

Query: 479 LCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
                 +    C+VD++G+ G +++A S   Q+P   +   W A++S   +H + D  L
Sbjct: 437 YGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL 495



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 178/402 (44%), Gaps = 40/402 (9%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSS 82
           L+  A +  Q+   C  N      F  + ++C+ L +++   ++H  +V  G    +F  
Sbjct: 117 LYVEALSIFQVMLSCAFNPD-HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG 175

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
             LV  Y   G L  +R   D + YR+V +WNSM++ Y + G+  +A             
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA------------- 222

Query: 143 RPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA--RKL 200
                     L+ C+ +            L    D    ASL  + C   L NV     +
Sbjct: 223 ----------LEICKEMDS----------LNLNHDAGTMASLSPVVCYTSLENVQYIHNM 262

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F+ M  ++  SWN MI+ Y  +    EA+ +  +M   G+  D +T+AS+LP C     +
Sbjct: 263 FERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSAL 322

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H YI K  L  NL + N L++MYAK G +  A  VFD+M  RDVVSW S+++AY
Sbjct: 323 FLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAY 382

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            +S     A   F  M  +G  PD +  VS+ S  +        R     +  +   +  
Sbjct: 383 GRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPR 442

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           +     +VD++ + G +  A +  + +P++ +   W  L++ 
Sbjct: 443 IEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 157/351 (44%), Gaps = 29/351 (8%)

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
           I+ Q    +    +H  I+       D  +   ++  Y+  G  + A  +F+    K+V+
Sbjct: 44  ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVV 103

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
            +N +I  Y  N L  EA+ +FQ+M  C   NP+  T+  +L A S +  LR G+++H  
Sbjct: 104 FFNVMIRSYVNNNLYVEALSIFQVMLSC-AFNPDHYTFPCVLKACSGLDNLRVGLQVHDA 162

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           ++K  L  ++F+   LV MYGKCG + +A  +  Q+P    V WN++++ +   GQ D A
Sbjct: 163 IVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDA 222

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L   ++M    +  D  T  SL     ++ L  E  +Y H M E    K +L  +  M+ 
Sbjct: 223 LEICKEMDSLNLNHDAGTMASLSPVVCYTSL--ENVQYIHNMFERM-TKKNLISWNVMIA 279

Query: 594 LFGRAGHLGMAHNFIQNMP---VRPDASIWGALLGAC----------RIHGNMELGAVAS 640
           ++        A +    M    ++PDA    +LL AC          R+H  +E G +  
Sbjct: 280 IYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRP 339

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           + L E           + ++YA  G  E   E R +     L+    W+S+
Sbjct: 340 NLLLE---------NALLDMYAKCGCLE---EARDVFDKMRLRDVVSWTSM 378


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/640 (39%), Positives = 389/640 (60%), Gaps = 2/640 (0%)

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A+ ++ +Y    L + A  +F  +      +W ++I  +        AL    EMR  G 
Sbjct: 42  ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGR 101

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D     S+L  C    ++  G  +H +IV+ G++ +L+  N L+NMY+K   +    +
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+ M  +DVVS+N++IA Y QS     A      M  + ++PD  TL S+  I ++  D
Sbjct: 162 VFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + +HG+++R+G    DV IG+++VDMYAK   I  +  VF  L  +D ISWN+L+ 
Sbjct: 222 VLKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY QNG  +EA+ +F+ M    ++ P    + S++PA +H+  L  G ++H  V++    
Sbjct: 281 GYVQNGRYNEALRLFRQMVSA-KVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 339

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            ++F+A+ LVDMY KCG I  A  +F ++     V W AII  H +HG G +A++ F +M
Sbjct: 340 RNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEM 399

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
             +GV+P+ + FV++LTACSH GLV E   YF+ M + +G+   L+HY  + DL GRAG 
Sbjct: 400 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 459

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A++FI  M V P  S+W  LL +C +H N+EL    ++++F +DSEN+G YVLM N+
Sbjct: 460 LEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNM 519

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G+W+ + ++R   R +GL+K P  S IE+ NK   F +G+R+HP  ++I + L+ +
Sbjct: 520 YASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAV 579

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             +M+  GYV D S VL DV+E+ K  +L  HSERLA+AFGII++ P + I++ KN+R+C
Sbjct: 580 MEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRIC 639

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   KFIS+ITEREIIVRD++RFHHF  G CSCGDYW
Sbjct: 640 TDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 256/472 (54%), Gaps = 11/472 (2%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
             K+LHA  + +  +    S++ +++ Y NL  L  +   F  +    V  W S+I  + 
Sbjct: 23  QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
                S A+  F +    SG  PD   FP VLK+C  ++D   G+ +H  +++LG + D+
Sbjct: 82  DQSLFSRALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           +   +L++MY +    +  RK+F+ MP +D  S+N +I+GY QSG   +AL ++ EM   
Sbjct: 141 YTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTS 200

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            +  D  T++S+LP+ +   ++L G  IH Y+++ G++ ++++ ++L++MYAK   +  +
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF  +  RD +SWNS++A Y Q+     A   F  M  A ++P  +   S+    A L
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + +HG+++ RG F  ++ I +A+VDMY+K G I +A  +F+ + + D +SW  +
Sbjct: 321 ATLHLGKQLHGYVL-RGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAI 379

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-N 477
           I G+A +G   EA+ +F+ M+    + PNQ  +V++L A SHVG + +       + K  
Sbjct: 380 IMGHALHGHGHEAVSLFEEMKR-QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 438

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPWNAIISCHGIH 527
            L  ++     + D+ G+ G++++A       +V  + SV W+ ++S   +H
Sbjct: 439 GLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSV-WSTLLSSCSVH 489



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 9/178 (5%)

Query: 48  IDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  +  +C     LH  K+LH  ++  G  + +F ++ LV+ Y+  G++  +R  FD 
Sbjct: 308 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDR 367

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG 162
           ++  +  +W ++I  +   G   EAV  F +     G++P+   F  VL AC +  LVD 
Sbjct: 368 MNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDE 426

Query: 163 K-KIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
                 S+ K+ G   ++   A++  +  R G    A      M V  +GS W+ ++S
Sbjct: 427 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLS 484


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 268/659 (40%), Positives = 395/659 (59%), Gaps = 37/659 (5%)

Query: 163 KKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           KK+H  VL   +  W+  V   L+ +Y   G   +AR +FD++  ++   +N MI  Y  
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    +AL +   M  +G   D  T   +L   +RSD++  GL IH  ++K GL+ NL+V
Sbjct: 98  NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N LI MY K   ++ A +V D++  RDVVSWNS+++ Y Q+     A      M+   +
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNL 217

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P+  T+ SL   V       N+ S            ++V        +Y K        
Sbjct: 218 KPNDCTMASLLPAVT------NTTS------------DNV--------LYVK-------- 243

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F  L  K VISWN +I  Y  N +  EA+ ++  ME  N + P+  + VS+LPAY  +
Sbjct: 244 EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQME-ANGVEPDVVSIVSVLPAYGDL 302

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL  G ++H    +  L  ++ +   L+DMY KCG + DA ++F Q+     V W +II
Sbjct: 303 SALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSII 362

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +G  GQG  A+  F +M + G+ PD I FVS+L ACSH+GL+ +G+ YF++M E  GI
Sbjct: 363 SAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE-CGI 421

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P L+H+ C+VDL GRAG +  A+ FI+ MP+ PD  +WG LL ACR++ NM +G +A+D
Sbjct: 422 TPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAAD 481

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           +L  ++ E+ GYYVL+SNIYA  G+W  V  +RS+   +G+KK PG S++E+N+ V  F 
Sbjct: 482 KLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFL 541

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+ +HP+ +KIY+EL  L  KMK LGY+P+    L DVEE++KE+ L  HSE+LA+AF 
Sbjct: 542 AGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFA 601

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           II++ P +PI++ KNLRVCGDCH   K IS+I EREII+RD++RFHHF++G CSCGDYW
Sbjct: 602 IINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 246/481 (51%), Gaps = 48/481 (9%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL+  YA  G+   +RH FD I+ +NV  +N MI  YV      +A+   Y+   T G  
Sbjct: 59  KLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDAL-LVYKTMYTQGFV 117

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YT+P VLKA     +L  G +IH +VLK+G + +++V   L+ MY +      A+++
Sbjct: 118 PDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQV 177

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR--SD 258
            D++P RD  SWN+M+S Y Q+G   +AL++  EM    +  +  T+AS+LP      SD
Sbjct: 178 LDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSD 237

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           N+L                           Y K         +F ++ ++ V+SWN +IA
Sbjct: 238 NVL---------------------------YVK--------EMFLKLTKKSVISWNVMIA 262

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y  ++ P  A   ++ M+  G++PD++++VS+      L+     R VH F  R+   +
Sbjct: 263 MYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKK-LL 321

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            ++++ NA++DMYAK G +  A AVF  +  +DV+SW ++I+ Y + G   +A+ VF  M
Sbjct: 322 PNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEM 381

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCG 497
                +NP+   +VS+L A SH G L  G + +  ++  C +   +    C+VD+ G+ G
Sbjct: 382 RNSG-LNPDSIAFVSVLAACSHAGLLDDG-RYYFNLMAECGITPKLEHFACVVDLLGRAG 439

Query: 498 RIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           +ID+A     Q+P       W  ++S   ++   +  +    ++L   + P+H  +  LL
Sbjct: 440 KIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLL--MLNPEHSGYYVLL 497

Query: 557 T 557
           +
Sbjct: 498 S 498



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 174/403 (43%), Gaps = 43/403 (10%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  ++  G    ++    L+  Y     L  ++   D I  R+V +WNSM+SVY + G
Sbjct: 141 QIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNG 200

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
           R ++A++   +    + L+P+  T   +L A  N      ++                  
Sbjct: 201 RFNDALELCREMEALN-LKPNDCTMASLLPAVTNTTSDNVLY------------------ 241

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
                        +++F  +  +   SWN MI+ Y  +    EA+ +  +M   GV  D 
Sbjct: 242 ------------VKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDV 289

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +++ S+LP       +  G  +H +  +  L  NL + N LI+MYAK G +R A  VF+Q
Sbjct: 290 VSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQ 349

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M  RDVVSW SII+AY +      A   F  M+ +G+ PD +  VS+ +  +      + 
Sbjct: 350 MQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDG 409

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG-- 421
           R     +   G     +     VVD+  + G I+ A      +P++ D   W  L++   
Sbjct: 410 RYYFNLMAECG-ITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACR 468

Query: 422 -YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
            Y+   +   A +   M+      NP + G YV +   Y+  G
Sbjct: 469 VYSNMNIGILAADKLLML------NPEHSGYYVLLSNIYAKAG 505



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 6/231 (2%)

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           +F T +Q     DL        I+ Q  D    + +HG ++   +   +  +G  ++ +Y
Sbjct: 10  YFATARQLSFTEDLCN-----RILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVY 64

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           A  G    A  +F+ +  K+V+ +N +I  Y  N L  +A+ V++ M     + P+  TY
Sbjct: 65  AACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFV-PDMYTY 123

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
             +L A S   +L  G++IH  V+K  L  +++V   L+ MYGKC  + +A  +  ++P 
Sbjct: 124 PCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPC 183

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
              V WN+++S +  +G+ + AL   R+M    ++P+  T  SLL A +++
Sbjct: 184 RDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT 234



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 5/159 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +R+H        +  +     L++ YA  G L  +R  F+ + +R+V +W S+IS Y +C
Sbjct: 309 RRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKC 368

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G+  +AV  F +    SGL PD   F  VL AC +   L DG+     + + G    +  
Sbjct: 369 GQGRDAVAVFAEMR-NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEH 427

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
            A ++ +  R G  + A      MP+  D   W  ++S 
Sbjct: 428 FACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/643 (41%), Positives = 391/643 (60%), Gaps = 5/643 (0%)

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           F+    ++    FG  N A K F ++   D   WNA+I GY Q       + +  +M++ 
Sbjct: 35  FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 94

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V  +  T   +L  C  +     G  IH    K+G   N+FV N+L++MYAKFG + +A
Sbjct: 95  QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 154

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VFD++ +R VVSW SII+ Y Q+ DP+ A   F  M+Q  ++PD + LVS+ +    +
Sbjct: 155 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 214

Query: 359 NDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            D    +S+HG + + G  F  D++I  ++  MYAK G++  A   F  +   ++I WN 
Sbjct: 215 EDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNA 272

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I+GYA NG   EAI++F+ M   N I  +  T  S + A + VG+L     +   + K+
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKN-IRVDSITMRSAVLASAQVGSLELARWLDGYISKS 331

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               D FV T L+DMY KCG I  A  +F +V     V W+ +I  +G+HG G +A+  +
Sbjct: 332 EYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLY 391

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +M   GV P+  TF+ LLTAC +SGLV EG   FH+M +  GI+PH +HY C+VDL GR
Sbjct: 392 NEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH-GIEPHHQHYSCVVDLLGR 450

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG+L  A++FI +MP++P  S+WGALL AC+IH  + LG +A+++LF +D  N G+YV +
Sbjct: 451 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQL 510

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN+YA+   W  V  VR +   +GL K  G SSIE+N  ++ F  G+R+HPK ++I++EL
Sbjct: 511 SNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEEL 570

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L  ++K+ GYVP    VL D+  +E E  L  HSERLA+A+GIIS+ P + ++I KNL
Sbjct: 571 DRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNL 630

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           R C +CH+  K IS++ +REII+RD+ RFHHFKDG+CSCGD+W
Sbjct: 631 RACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 247/472 (52%), Gaps = 7/472 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H+ +++  L+VSG  K  F   K +N   + GD++++   F  +S  ++  WN++I  
Sbjct: 15  LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
           Y +   +   +  +    + S + P+ +TF  VLKAC        GK+IH    K GF  
Sbjct: 75  YTQKNIVDAPIRMYMDMQI-SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGS 133

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           +VFV  SL+ MY +FG  + AR +FD +  R   SW ++ISGY Q+G+ +EAL++  EMR
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              V  D I + S++      +++  G  IH  + K GLEF   +  +L  MYAK G++ 
Sbjct: 194 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 253

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A   F++M + +++ WN++I+ Y  +     A   F  M    I+ D +T+ S     A
Sbjct: 254 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASA 313

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           Q+     +R + G+I  +  + +D  +   ++DMYAK G I  A  VF+ +  KDV+ W+
Sbjct: 314 QVGSLELARWLDGYI-SKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWS 372

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +I GY  +G   EAI ++  M++   + PN GT++ +L A  + G +++G ++   +  
Sbjct: 373 VMIMGYGLHGHGQEAICLYNEMKQAG-VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPD 431

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
           + +       +C+VD+ G+ G ++ A      +P    V  W A++S   IH
Sbjct: 432 HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 290/832 (34%), Positives = 445/832 (53%), Gaps = 80/832 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + SC  L   +RL   L++      V +   ++N YA LG LS +   F  +  R+V +W
Sbjct: 69  YLSCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASW 125

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVL 170
           N+++S Y +  +   +++ F     +    P+ +T    +K+C  L       ++   V 
Sbjct: 126 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 185

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLF----------------------------- 201
           K   + D  VAA+L+ M+ R G  ++A +LF                             
Sbjct: 186 KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALE 245

Query: 202 --DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
             D MP RD  SWN M+S   QSG   EALD++ +M+ +GV +D  T  S L  CAR  +
Sbjct: 246 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 305

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  +H  ++++    + +V++ L+ +YAK G  + A  VF+ + +R+ V+W  +I+ 
Sbjct: 306 LRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 365

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           + Q      +   F  M+   +  D   L +L S      D    R +H   ++ G  ++
Sbjct: 366 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ-IQ 424

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            V++ N+++ MYAK   + SA A+F  +  KD++SW ++IT Y+Q G  ++A E F  M 
Sbjct: 425 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 484

Query: 440 ECNEIN-------------------------------PNQGTYVSILPAYSHVGALRQGI 468
           E N I                                P+  TYV++    + +GA + G 
Sbjct: 485 EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 544

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +I  R +K  L  D  VA  ++ MY KCGRI +A  +F  +     V WNA+I+ +  HG
Sbjct: 545 QIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 604

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +A+  F  +L  G +PD+I++V++L+ CSHSGLV EG+ YF MM+    I P L+H+
Sbjct: 605 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 664

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL GRAGHL  A + I +MP++P A +WGALL AC+IHGN EL  +A+  +FE+DS
Sbjct: 665 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS 724

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            + G Y+LM+ IYA+ GK +   ++R L RD+G+KK PG+S +EV+NKV +F   + +HP
Sbjct: 725 PDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHP 784

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           +   I  +L  L  K+  LGYV   S          +  I   HSE+LA+AFG+++ P  
Sbjct: 785 QVLAIRKKLDELMEKIARLGYVRTDS---------TRSEI--HHSEKLAVAFGLMTLPTW 833

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            PI I KNLR+CGDCH   K IS +T RE ++RD+ RFHHF  G CSCGDYW
Sbjct: 834 MPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 284/571 (49%), Gaps = 48/571 (8%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D+F  C  +    RL     V  K  T+F    ++  Y     +  +   FD +  R+V 
Sbjct: 201 DMFVRCGAVDLASRL----FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVV 256

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +WN M+S   + GR+ EA+D       + G+R D  T+   L AC  L     GK++H  
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDMQ-SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 315

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           V++     D +VA++L+ +Y + G    A+ +F+ +  R++ +W  +ISG+ Q G   E+
Sbjct: 316 VIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 375

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           +++ ++MR E +++D   +A+++  C    ++  G  +H   +K G    + VSN+LI+M
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 435

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-------- 340
           YAK   ++ A  +F  M E+D+VSW S+I AY Q  +   A  FF  M +          
Sbjct: 436 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 495

Query: 341 ------------------------IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
                                   ++PD +T V+L    A L   +    + G  ++ G 
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 555

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + D  + NAV+ MY+K G I  A  VF+ L VKD++SWN +ITGY+Q+G+  +AIE+F 
Sbjct: 556 II-DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 614

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYG 494
            + +     P+  +YV++L   SH G +++G K +  ++K        +   +C+VD+ G
Sbjct: 615 DILK-RGAKPDYISYVAVLSGCSHSGLVQEG-KFYFDMMKRAHNISPGLEHFSCMVDLLG 672

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
           + G + +A  L   +P + ++  W A++S   IHG  + A     + + E   PD  +++
Sbjct: 673 RAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSYM 731

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
            +    + +G   +  +   +M+++ GIK +
Sbjct: 732 LMAKIYADAGKSDDSAQIRKLMRDK-GIKKN 761


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/731 (36%), Positives = 430/731 (58%), Gaps = 25/731 (3%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RN 158
           FD ++  + + WN MI  +  CG   EAV  FY   + +G++ D +T+P V+K+     +
Sbjct: 87  FDEMNKADAFLWNVMIKGFTSCGLYIEAVQ-FYSRMVFAGVKADTFTYPFVIKSVAGISS 145

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           L +GKKIH  V+KLGF  DV+V  SL+ +Y + G A  A K+F++MP RD  SWN+MISG
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF- 277
           Y   G+   +L +  EM   G   D  +  S L  C+   +   G  IH + V+  +E  
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM- 336
           ++ V  ++++MY+K+G + +A R+F+ M++R++V+WN +I  Y ++     A   F  M 
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           +Q G+QPD++T ++L    A L      R++HG+ MRRG F+  +++  A++DMY + G 
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRG-FLPHMVLETALIDMYGECGQ 380

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           + SA  +F+ +  K+VISWN++I  Y QNG    A+E+FQ + + + + P+  T  SILP
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASILP 439

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           AY+   +L +G +IHA ++K+    +  +   LV MY  CG ++DA   F  +     V 
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN+II  + +HG G  ++  F +M+   V P+  TF SLL ACS SG+V EG  YF  M+
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
            E+GI P ++HYGCM+DL GR G+   A  F++ MP  P A IWG+LL A R H ++ + 
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
             A++++F+++ +N G YVL+ N+YA  G+WE V+ ++ L   +G+ +T   S++E   K
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGK 679

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS----- 751
             +F  G+R+H    KIY E+ ++ ++M     V ++   +  V     E ++ S     
Sbjct: 680 SHVFTNGDRSHVATNKIY-EVLDVVSRM-----VGEEDIYVHCVSRLRPETLVKSRSNSP 733

Query: 752 --HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
             HS RLA  FG+IS+     + +  N R+C  CH + +  S++T REI+V DS  FHHF
Sbjct: 734 RRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHF 793

Query: 810 KDGICSCGDYW 820
            +G CSCG+YW
Sbjct: 794 SNGRCSCGNYW 804



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 242/461 (52%), Gaps = 17/461 (3%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L   K++HA+++  G +  V+    L++ Y  LG    +   F+ +  R++ +WNSMI
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGF 174
           S Y+  G    ++  F +  L  G +PD ++    L AC ++     GK+IHC  ++   
Sbjct: 204 SGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262

Query: 175 EW-DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           E  DV V  S+L MY ++G  + A ++F+ M  R+  +WN MI  Y ++G   +A     
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322

Query: 234 EMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           +M  + G+  D IT  ++LP  A    IL G  IH Y ++ G   ++ +   LI+MY + 
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G ++ A  +FD+M E++V+SWNSIIAAY Q+    +A   F  +  + + PD  T+ S+ 
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438

Query: 353 SIVAQLNDCRNSRSVHGFIMR-RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
              A+       R +H +I++ R W   + II N++V MYA  G +  A   F  + +KD
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V+SWN++I  YA +G    ++ +F  M   + +NPN+ T+ S+L A S  G + +G + +
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEM-IASRVNPNKSTFASLLAACSISGMVDEGWE-Y 554

Query: 472 ARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP 510
              +K     D  +    C++D+ G+ G    A     ++P
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 203/414 (49%), Gaps = 46/414 (11%)

Query: 72  VSGKIKT--VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           V  +I+T  V   T +++ Y+  G++S++   F+ +  RN+  WN MI  Y R GR+++A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
             CF + +  +GL+PD  T   +L A   +++G+ IH   ++ GF   + +  +L+ MY 
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPAS-AILEGRTIHGYAMRRGFLPHMVLETALIDMYG 376

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
             G    A  +FD M  ++  SWN++I+ Y Q+G    AL++  E+    +  D  T+AS
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           ILP  A S ++  G  IH YIVK     N  + N+L++MYA  G +  A + F+ ++ +D
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496

Query: 310 VVSWNSIIAAYEQSNDPITAHGF-------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           VVSWNSII AY         HGF       F+ M  + + P+  T  SL      L  C 
Sbjct: 497 VVSWNSIIMAY-------AVHGFGRISVWLFSEMIASRVNPNKSTFASL------LAAC- 542

Query: 363 NSRSVHGFI---------MRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLP-VKD 411
              S+ G +         M+R + ++  I     ++D+  + G  ++A    E +P V  
Sbjct: 543 ---SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPT 599

Query: 412 VISWNTLITGYAQNG---LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
              W +L+     +    +A  A E    ME     + N G YV +L  Y+  G
Sbjct: 600 ARIWGSLLNASRNHKDITIAEFAAEQIFKME-----HDNTGCYVLLLNMYAEAG 648


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 290/832 (34%), Positives = 445/832 (53%), Gaps = 80/832 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + SC  L   +RL   L++      V +   ++N YA LG LS +   F  +  R+V +W
Sbjct: 49  YLSCGALSDARRL---LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASW 105

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVL 170
           N+++S Y +  +   +++ F     +    P+ +T    +K+C  L       ++   V 
Sbjct: 106 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 165

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLF----------------------------- 201
           K   + D  VAA+L+ M+ R G  ++A +LF                             
Sbjct: 166 KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALE 225

Query: 202 --DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
             D MP RD  SWN M+S   QSG   EALD++ +M+ +GV +D  T  S L  CAR  +
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  +H  ++++    + +V++ L+ +YAK G  + A  VF+ + +R+ V+W  +I+ 
Sbjct: 286 LRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 345

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           + Q      +   F  M+   +  D   L +L S      D    R +H   ++ G  ++
Sbjct: 346 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ-IQ 404

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            V++ N+++ MYAK   + SA A+F  +  KD++SW ++IT Y+Q G  ++A E F  M 
Sbjct: 405 AVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS 464

Query: 440 ECNEIN-------------------------------PNQGTYVSILPAYSHVGALRQGI 468
           E N I                                P+  TYV++    + +GA + G 
Sbjct: 465 EKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 524

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +I  R +K  L  D  VA  ++ MY KCGRI +A  +F  +     V WNA+I+ +  HG
Sbjct: 525 QIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHG 584

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +A+  F  +L  G +PD+I++V++L+ CSHSGLV EG+ YF MM+    I P L+H+
Sbjct: 585 MGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF 644

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL GRAGHL  A + I +MP++P A +WGALL AC+IHGN EL  +A+  +FE+DS
Sbjct: 645 SCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDS 704

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            + G Y+LM+ IYA+ GK +   ++R L RD+G+KK PG+S +EV+NKV +F   + +HP
Sbjct: 705 PDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHP 764

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           +   I  +L  L  K+  LGYV   S          +  I   HSE+LA+AFG+++ P  
Sbjct: 765 QVLAIRKKLDELMEKIARLGYVRTDS---------TRSEI--HHSEKLAVAFGLMTLPTW 813

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            PI I KNLR+CGDCH   K IS +T RE ++RD+ RFHHF  G CSCGDYW
Sbjct: 814 MPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 284/571 (49%), Gaps = 48/571 (8%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D+F  C  +    RL     V  K  T+F    ++  Y     +  +   FD +  R+V 
Sbjct: 181 DMFVRCGAVDLASRL----FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVV 236

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +WN M+S   + GR+ EA+D       + G+R D  T+   L AC  L     GK++H  
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQ-SKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQ 295

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           V++     D +VA++L+ +Y + G    A+ +F+ +  R++ +W  +ISG+ Q G   E+
Sbjct: 296 VIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTES 355

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           +++ ++MR E +++D   +A+++  C    ++  G  +H   +K G    + VSN+LI+M
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-------- 340
           YAK   ++ A  +F  M E+D+VSW S+I AY Q  +   A  FF  M +          
Sbjct: 416 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 475

Query: 341 ------------------------IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
                                   ++PD +T V+L    A L   +    + G  ++ G 
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + D  + NAV+ MY+K G I  A  VF+ L VKD++SWN +ITGY+Q+G+  +AIE+F 
Sbjct: 536 II-DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYG 494
            + +     P+  +YV++L   SH G +++G K +  ++K        +   +C+VD+ G
Sbjct: 595 DILK-RGAKPDYISYVAVLSGCSHSGLVQEG-KFYFDMMKRAHNISPGLEHFSCMVDLLG 652

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
           + G + +A  L   +P + ++  W A++S   IHG  + A     + + E   PD  +++
Sbjct: 653 RAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSYM 711

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
            +    + +G   +  +   +M+++ GIK +
Sbjct: 712 LMAKIYADAGKSDDSAQIRKLMRDK-GIKKN 741


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/709 (36%), Positives = 424/709 (59%), Gaps = 41/709 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV---ARKLFDDMPVRD 208
           +L++C++   G +IH   +  G    +F  + L+  +   G  +    +R LF  +   +
Sbjct: 15  LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPN 74

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIH 267
              WN MI GY +S N  EA+ +   M  +G++  +  T   +L  CAR  ++  G  +H
Sbjct: 75  LFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVH 134

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            +I+KHG E +LFV N LI++Y+ FG +  A  +FD+ + RD+VS+N++I  Y + N P 
Sbjct: 135 SHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPE 194

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNA 386
           +A   F  MQ +GI PD  T V+L S+ + LN+    + +H  + +    ++ ++++ +A
Sbjct: 195 SALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSA 254

Query: 387 VVDMYAKLGIINSACAVFEGLPV--------------------------------KDVIS 414
           +VDMYAK G+IN A  VF  +                                  +DVIS
Sbjct: 255 IVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVIS 314

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W  +I+GY+Q G  SEA+E+F+ ME    I P++ T V++L A + +GA   G +++ + 
Sbjct: 315 WTAMISGYSQAGQCSEALELFKEMEALG-IKPDEVTLVAVLSACARLGAFDLGKRLYHQY 373

Query: 475 IKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS--SSVPWNAIISCHGIHGQGD 531
           I+N     +  +   ++DMY KCG ID A+ +F +V ++  +   +N++I+    HG G+
Sbjct: 374 IENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGE 433

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
            A+  FR+++  G++PD +TFV +L AC HSGL+ EG++ F  M   +GIKP ++HYGCM
Sbjct: 434 TAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCM 493

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GR G L  A++ +Q MP   ++ IW ALL ACR HGN+++G +A  +L E+++++ 
Sbjct: 494 VDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHG 553

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
             YVL+SNI A+  +WE   +VR +  D G++K PGWS IE+   +  F   +++HP+ +
Sbjct: 554 ARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGK 613

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +I   L+++  ++KS GYVP+ + V+ D++E+EKE +++ HSE+LA+AFG++   P   I
Sbjct: 614 EIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTI 673

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLR+C DCH   K +S+I  REI VRD+ RFHHF++G CSC D+W
Sbjct: 674 RIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/526 (30%), Positives = 266/526 (50%), Gaps = 57/526 (10%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD---LSFSRHTFDHISYRN 109
           L +SC       ++HA  +V+G    +FS ++L++F++ LG    L  SR  F  I   N
Sbjct: 15  LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPN 74

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           ++ WN+MI  Y R     EA+  +          P+ +TFP +L +C  L     G ++H
Sbjct: 75  LFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVH 134

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             ++K GFE D+FV  +L+H+Y  FG  N+AR LFD+  VRD  S+N MI GY +     
Sbjct: 135 SHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPE 194

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH--GLEFNLFVSNN 284
            AL +  EM+  G+  D  T  ++  VC+  +    G  IH  + K+   ++ N+ + + 
Sbjct: 195 SALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSA 254

Query: 285 LINMYAKFGMMRHALRV--------------------------------FDQMMERDVVS 312
           +++MYAK G++  A RV                                F+ M ERDV+S
Sbjct: 255 IVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVIS 314

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           W ++I+ Y Q+     A   F  M+  GI+PD +TLV++ S  A+L      + ++   +
Sbjct: 315 WTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYI 374

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE--GLPVKDVISWNTLITGYAQNGLASE 430
             G F ++ I+  AV+DMYAK G I+SA  +F   G  +K    +N++I G AQ+GL   
Sbjct: 375 ENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGET 434

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT--- 487
           AI VF+ +     + P++ T+V +L A  H G + +G K+   +      F+ +      
Sbjct: 435 AITVFRELISTG-LKPDEVTFVGVLCACGHSGLIEEGKKLFESM------FNAYGIKPQM 487

Query: 488 ----CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
               C+VD+ G+ G +++A  L  ++P  ++SV W A++S    HG
Sbjct: 488 EHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 160/343 (46%), Gaps = 27/343 (7%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D++  C  ++  +R+ + +   G  K+  + + +V  YA  G+++ +R  F+H+  R+V 
Sbjct: 257 DMYAKCGLINIAERVFSTM---GTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVI 313

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +W +MIS Y + G+ SEA++ F +     G++PD  T   VL AC  L     GK+++  
Sbjct: 314 SWTAMISGYSQAGQCSEALELFKEME-ALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQ 372

Query: 169 VLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGNA 225
            ++ G F  +  + A+++ MY + G  + A ++F  +   ++    +N+MI+G  Q G  
Sbjct: 373 YIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLG 432

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNN 284
             A+ +  E+   G+  D +T   +L  C  S  I  G  L       +G++  +     
Sbjct: 433 ETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGC 492

Query: 285 LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND----PITAHGFFTTMQQA 339
           ++++  ++G +  A  +  +M  E + V W ++++A     +     I          Q 
Sbjct: 493 MVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQH 552

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSV------HGFIMRRGW 376
           G +      V L++I+A  N    +R V      HG     GW
Sbjct: 553 GAR-----YVLLSNILADANQWEEARQVRKVMEDHGIRKPPGW 590


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/725 (37%), Positives = 411/725 (56%), Gaps = 17/725 (2%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG---LRPDFYTFPPVLKAC---RNLVD 161
           RN  +WNSMI V+   G   E+     +    +G     PD  T   VL  C   R +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK +H   +KL  + ++ +  +L+ MY + G    A+ +F     ++  SWN M+ G+  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 222 SGNAVEALDILDEMRLEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            G+     D+L +M   G  V  D +T+ + +PVC     + S   +H Y +K    +N 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V+N  +  YAK G + +A RVF  +  + V SWN++I  + QSNDP  +      M+ +
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G+ PD  T+ SL S  ++L   R  + VHGFI+R  W   D+ +  +V+ +Y   G + +
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCT 299

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY- 458
             A+F+ +  K ++SWNT+ITGY QNG    A+ VF+ M     +   Q   +S++P + 
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV----LYGIQLCGISMMPVFG 355

Query: 459 --SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
             S + +LR G + HA  +K+ L  D F+A  L+DMY K G I  +  +F  +   S+  
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WNA+I  +GIHG   +A+  F +M   G  PD +TF+ +LTAC+HSGL+ EG RY   M+
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI-QNMPVRPDASIWGALLGACRIHGNMEL 635
             FG+KP+LKHY C++D+ GRAG L  A   + + M    D  IW +LL +CRIH N+E+
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 535

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G   + +LFE++ E    YVL+SN+YA +GKWE V +VR    +  L+K  G S IE+N 
Sbjct: 536 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 595

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           KV  F  G R    +E+I      L  K+  +GY PD   V  D+ E+EK   L  HSE+
Sbjct: 596 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 655

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LA+ +G+I +   + I+++KNLR+C DCHN  K IS++ EREI+VRD+ RFHHFK+G+CS
Sbjct: 656 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 715

Query: 816 CGDYW 820
           CGDYW
Sbjct: 716 CGDYW 720



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 254/491 (51%), Gaps = 12/491 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K +  +  L++ Y+  G ++ ++  F   + +NV +WN+M+  +   G      D   Q 
Sbjct: 75  KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 134

Query: 137 TLTSG--LRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
            L  G  ++ D  T    +  C +   L   K++HC  LK  F ++  VA + +  Y + 
Sbjct: 135 -LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 193

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G  + A+++F  +  +   SWNA+I G+ QS +   +LD   +M++ G+  D  TV S+L
Sbjct: 194 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 253

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C++  ++  G  +H +I+++ LE +LFV  +++++Y   G +     +FD M ++ +V
Sbjct: 254 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 313

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  Y Q+  P  A G F  M   GIQ   ++++ +    + L   R  R  H + 
Sbjct: 314 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 373

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++     +D  I  +++DMYAK G I  +  VF GL  K   SWN +I GY  +GLA EA
Sbjct: 374 LKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 432

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLV 490
           I++F+ M+     NP+  T++ +L A +H G + +G++   ++  +  L  ++    C++
Sbjct: 433 IKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVI 491

Query: 491 DMYGKCGRIDDAMSLFY-QVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLD-EGVRP 547
           DM G+ G++D A+ +   ++   + V  W +++S   IH   +       ++ + E  +P
Sbjct: 492 DMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKP 551

Query: 548 DHITFVSLLTA 558
           ++   +S L A
Sbjct: 552 ENYVLLSNLYA 562



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 204/430 (47%), Gaps = 28/430 (6%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L  +K LH   +    +     +   V  YA  G LS+++  F  I  + V +WN++I  
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 220

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           + +      ++D   Q  + SGL PD +T   +L AC   ++L  GK++H  +++   E 
Sbjct: 221 HAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 279

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+FV  S+L +Y   G     + LFD M  +   SWN +I+GY Q+G    AL +  +M 
Sbjct: 280 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 339

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           L G+ +  I++  +   C+   ++  G   H Y +KH LE + F++ +LI+MYAK G + 
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            + +VF+ + E+   SWN++I  Y        A   F  MQ+ G  PD LT + +     
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV----- 454

Query: 357 QLNDCRNSRSVHGFI-----MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVF--EGLP 408
            L  C +S  +H  +     M+  + ++  +   A V+DM  + G ++ A  V   E   
Sbjct: 455 -LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 513

Query: 409 VKDVISWNTLITG--YAQNGLASE--AIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             DV  W +L++     QN    E  A ++F++  E  E       YV +   Y+ +G  
Sbjct: 514 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE------NYVLLSNLYAGLGKW 567

Query: 465 RQGIKIHARV 474
               K+  R+
Sbjct: 568 EDVRKVRQRM 577



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L  +C+KL  +   K +H  ++ +   + +F    +++ Y + G+L   +  FD +  ++
Sbjct: 252 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 311

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
           + +WN++I+ Y++ G    A+  F Q  L  G++    +  PV  AC    +L  G++ H
Sbjct: 312 LVSWNTVITGYLQNGFPDRALGVFRQMVLY-GIQLCGISMMPVFGACSLLPSLRLGREAH 370

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              LK   E D F+A SL+ MY + G    + K+F+ +  + + SWNAMI GY   G A 
Sbjct: 371 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 430

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNL 285
           EA+ + +EM+  G + D +T   +L  C  S  I  GL  +       GL+ NL     +
Sbjct: 431 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 490

Query: 286 INMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAA 319
           I+M  + G +  ALRV  + M  E DV  W S++++
Sbjct: 491 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 526


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/759 (37%), Positives = 427/759 (56%), Gaps = 17/759 (2%)

Query: 66   LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
            +H L+V +G ++ VF    LV+FY   G ++ +   FD +  RN+ +WNSMI V+   G 
Sbjct: 564  VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 623

Query: 126  LSEAVDCFYQFTLTSG---LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
              E+     +    +G     PD  T   VL  C   R +  GK +H   +KL  + ++ 
Sbjct: 624  SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683

Query: 180  VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
            +  +L+ MY + G    A+ +F     ++  SWN M+ G+   G+     D+L +M   G
Sbjct: 684  LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 743

Query: 240  --VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
              V  D +T+ + +PVC     + S   +H Y +K    +N  V+N  +  YAK G + +
Sbjct: 744  EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 803

Query: 298  ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
            A RVF  +  + V SWN++I  + QSNDP  +      M+ +G+ PD  T+ SL S  ++
Sbjct: 804  AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 863

Query: 358  LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            L   R  + VHGFI+R  W   D+ +  +V+ +Y   G + +  A+F+ +  K ++SWNT
Sbjct: 864  LKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 922

Query: 418  LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY---SHVGALRQGIKIHARV 474
            +ITGY QNG    A+ VF+ M     +   Q   +S++P +   S + +LR G + HA  
Sbjct: 923  VITGYLQNGFPDRALGVFRQMV----LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 978

Query: 475  IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            +K+ L  D F+A  L+DMY K G I  +  +F  +   S+  WNA+I  +GIHG   +A+
Sbjct: 979  LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 1038

Query: 535  NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
              F +M   G  PD +TF+ +LTAC+HSGL+ EG RY   M+  FG+KP+LKHY C++D+
Sbjct: 1039 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 1098

Query: 595  FGRAGHLGMAHNFI-QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
             GRAG L  A   + + M    D  IW +LL +CRIH N+E+G   + +LFE++ E    
Sbjct: 1099 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 1158

Query: 654  YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
            YVL+SN+YA +GKWE V +VR    +  L+K  G S IE+N KV  F  G R    +E+I
Sbjct: 1159 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 1218

Query: 714  YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
                  L  K+  +GY PD   V  D+ E+EK   L  HSE+LA+ +G+I +   + I++
Sbjct: 1219 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 1278

Query: 774  FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
            +KNLR+C DCHN  K IS++ EREI+VRD+ RFHHFK+G
Sbjct: 1279 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 176/586 (30%), Positives = 306/586 (52%), Gaps = 30/586 (5%)

Query: 64   KRLHALLVVSGKIKTV-FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            +++H L+  S +++      T+++  YA  G    SR  FD +  +N++ WN++IS Y R
Sbjct: 459  RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 518

Query: 123  CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
                 E ++ F +   T+ L PD +T+P V+KAC  + D   G  +H  V+K G   DVF
Sbjct: 519  NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 578

Query: 180  VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
            V  +L+  Y   G    A +LFD MP R+  SWN+MI  +  +G + E+  +L EM  E 
Sbjct: 579  VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 638

Query: 239  --GVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
              G  M D  T+ ++LPVCAR   I  G  +H + VK  L+  L ++N L++MY+K G +
Sbjct: 639  GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 698

Query: 296  RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ--AG---IQPDLLTLVS 350
             +A  +F     ++VVSWN+++  +    D    HG F  ++Q  AG   ++ D +T+++
Sbjct: 699  TNAQMIFKMNNNKNVVSWNTMVGGFSAEGD---THGTFDVLRQMLAGGEDVKADEVTILN 755

Query: 351  LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
               +    +   + + +H + +++  F+ + ++ NA V  YAK G ++ A  VF G+  K
Sbjct: 756  AVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 814

Query: 411  DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
             V SWN LI G+AQ+     +++    M + + + P+  T  S+L A S + +LR G ++
Sbjct: 815  TVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEV 873

Query: 471  HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
            H  +I+N L  D+FV   ++ +Y  CG +    +LF  +   S V WN +I+ +  +G  
Sbjct: 874  HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 933

Query: 531  DKALNFFRQMLDEGVRPDHITFVSLLTACS-----HSGLVSEGQRYFHMMQEEFGIKPHL 585
            D+AL  FRQM+  G++   I+ + +  ACS       G  +      H+++++  I   L
Sbjct: 934  DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 993

Query: 586  KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                  +D++ + G +  +      +  +  AS W A++    IHG
Sbjct: 994  ------IDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 1032



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 207/408 (50%), Gaps = 12/408 (2%)

Query: 162 GKKIHCSVL-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+KIH  V        D  +   ++ MY   G  + +R +FD +  ++   WNA+IS Y 
Sbjct: 458 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 517

Query: 221 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           ++    E L+   EM     +  D  T   ++  CA   ++  GL +H  +VK GL  ++
Sbjct: 518 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 577

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF---TTM 336
           FV N L++ Y   G +  AL++FD M ER++VSWNS+I  +  S++  +   F      M
Sbjct: 578 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMM 635

Query: 337 QQAG---IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           ++ G     PD+ TLV++  + A+  +    + VHG+ ++     +++++ NA++DMY+K
Sbjct: 636 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSK 694

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYV 452
            G I +A  +F+    K+V+SWNT++ G++  G      +V  QM+    ++  ++ T +
Sbjct: 695 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 754

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           + +P   H   L    ++H   +K    ++  VA   V  Y KCG +  A  +F+ +   
Sbjct: 755 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 814

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +   WNA+I  H        +L+   QM   G+ PD  T  SLL+ACS
Sbjct: 815 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 202/430 (46%), Gaps = 28/430 (6%)

Query: 60   LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            L  +K LH   +    +     +   V  YA  G LS+++  F  I  + V +WN++I  
Sbjct: 766  LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 825

Query: 120  YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
            + +      ++D   Q  + SGL PD +T   +L AC  L     GK++H  +++   E 
Sbjct: 826  HAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 884

Query: 177  DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
            D+FV  S+L +Y   G     + LFD M  +   SWN +I+GY Q+G    AL +  +M 
Sbjct: 885  DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 944

Query: 237  LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            L G+ +  I++  +   C+   ++  G   H Y +KH LE + F++ +LI+MYAK G + 
Sbjct: 945  LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 1004

Query: 297  HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
             + +VF+ + E+   SWN++I  Y        A   F  MQ+ G  PD LT + +     
Sbjct: 1005 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV----- 1059

Query: 357  QLNDCRNSRSVHGFI-----MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVF--EGLP 408
             L  C +S  +H  +     M+  + ++  +   A V+DM  + G ++ A  V   E   
Sbjct: 1060 -LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 1118

Query: 409  VKDVISWNTLITG--YAQNGLASE--AIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
              DV  W +L++     QN    E  A ++F++  E  E       YV +   Y+ +G  
Sbjct: 1119 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE------NYVLLSNLYAGLGKW 1172

Query: 465  RQGIKIHARV 474
                K+  R+
Sbjct: 1173 EDVRKVRQRM 1182



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 6/278 (2%)

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D    R +H  +        D ++   ++ MYA  G  + +  VF+ L  K++  WN +
Sbjct: 453 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 512

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+ Y++N L  E +E F  M    ++ P+  TY  ++ A + +  +  G+ +H  V+K  
Sbjct: 513 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 572

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L  DVFV   LV  YG  G + DA+ LF  +P  + V WN++I     +G  +++     
Sbjct: 573 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 632

Query: 539 QMLDE----GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           +M++E       PD  T V++L  C+    +  G +  H    +  +   L     ++D+
Sbjct: 633 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDM 691

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           + + G +  A   I  M    +   W  ++G     G+
Sbjct: 692 YSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGD 728


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 292/833 (35%), Positives = 441/833 (52%), Gaps = 82/833 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + SC  L   +RL   L    K   V +   ++N YA  G LS +   FD +  R+V +W
Sbjct: 49  YLSCGALSDARRL---LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASW 105

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           N+++S Y +  R  + ++ F     +    P+ +TF  V+K+C  L   +++   +L L 
Sbjct: 106 NTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGAL-GCRELAPQLLGLF 164

Query: 174 FEWDVF----VAASLLHMYCRFGLANVARKLF---------------------------- 201
           +++D +    V  +L+ M+ R G  + A +LF                            
Sbjct: 165 WKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAI 224

Query: 202 ---DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
              +DM  RD  SWN MI+   QSG   EAL ++ EM  +GV +D  T  S L  CAR  
Sbjct: 225 EYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLF 284

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           ++  G  +H  +++   + + +V++ LI +YAK G  + A RVF+ + +R+ VSW  +I 
Sbjct: 285 SLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIG 344

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
              Q      +   F  M+   +  D   L +L S      D    R +H   ++ G   
Sbjct: 345 GSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG-HN 403

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             +++ N+++ +YAK G + +A  VF  +  +D++SW ++IT Y+Q G   +A E F  M
Sbjct: 404 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM 463

Query: 439 EECN-------------------------------EINPNQGTYVSILPAYSHVGALRQG 467
              N                               ++ P+  TYV++    + +GA + G
Sbjct: 464 ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLG 523

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            +I    +K  L  +V VA   + MY KCGRI +A  LF  +     V WNA+I+ +  H
Sbjct: 524 DQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQH 583

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +A   F  ML +G +PD+I++V++L+ CSHSGLV EG+ YF MM    GI P L+H
Sbjct: 584 GMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEH 643

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           + CMVDL GRAGHL  A + I  MP++P A +WGALL AC+IHGN EL  +A+  +FE+D
Sbjct: 644 FSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELD 703

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
           S + G Y+L++ IY++ GK +   +VR L RD+G+KK PG+S +EV NKV +F   + +H
Sbjct: 704 SPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSH 763

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+   I +++  L  K+  LGYV           E  +  I   HSE+LA+AFGI+S P 
Sbjct: 764 PQVIAIRNKMDELMEKIAHLGYVR---------TESPRSEI--HHSEKLAVAFGIMSLPA 812

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             PI I KNLR+CGDCH   K IS +T+RE ++RD  RFHHFK G CSCGDYW
Sbjct: 813 WMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 286/577 (49%), Gaps = 50/577 (8%)

Query: 47  EIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           E    D+F  C  +    RL + +    +  T+F    ++  YA L  +  +   F+ ++
Sbjct: 176 ETALVDMFVRCGYVDFASRLFSQI----ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 231

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            R+V +WN MI+   + GR+ EA+    +     G+R D  T+   L AC  L     GK
Sbjct: 232 ERDVVSWNMMIAALSQSGRVREALGLVVEMH-RKGVRLDSTTYTSSLTACARLFSLGWGK 290

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V++   + D +VA++L+ +Y + G    A+++F+ +  R+S SW  +I G  Q  
Sbjct: 291 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 350

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +++++ ++MR E +++D   +A+++  C    ++  G  +H   +K G    + VSN
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 410

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM------- 336
           +LI++YAK G +++A  VF  M ERD+VSW S+I AY Q  + I A  FF  M       
Sbjct: 411 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAIT 470

Query: 337 -------------------------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
                                     Q  + PD +T V+L    A +   +    + G  
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G  + +V + NA + MY+K G I+ A  +F+ L  KDV+SWN +ITGY+Q+G+  +A
Sbjct: 531 VKAGLIL-NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQA 589

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG---IKIHARVIKNCLCFDVFVATC 488
            + F  M       P+  +YV++L   SH G +++G     +  RV       + F  +C
Sbjct: 590 AKTFDDMLS-KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF--SC 646

Query: 489 LVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
           +VD+ G+ G + +A  L  ++P + ++  W A++S   IHG  D+      + + E   P
Sbjct: 647 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN-DELAELAAKHVFELDSP 705

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           D  +++ L    S +G   +  +   +M+++ GIK +
Sbjct: 706 DSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK-GIKKN 741


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/749 (36%), Positives = 418/749 (55%), Gaps = 9/749 (1%)

Query: 50  FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
              +  SCTK       + +HA     G    +F    ++  Y   G    +   F  + 
Sbjct: 146 LSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMP 205

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           +R+  T+N++IS + +CG    A++ F +    SGL PD  T   +L AC +L D   G 
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGLSPDCVTISSLLAACASLGDLQKGT 264

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  + K G   D  +  SLL +Y + G    A  +F+     +   WN M+  + Q  
Sbjct: 265 QLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQIN 324

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  ++ ++  +M+  G+  +  T   IL  C  +  I  G  IH   VK G E +++VS 
Sbjct: 325 DLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSG 384

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY+K+G +  A RV + + E+DVVSW S+IA Y Q      A   F  MQ+ GI P
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWP 444

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D + L S  S  A +N  R    +H  I   G +  DV I NA+V++YA+ G I  A + 
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSG-YSGDVSIWNALVNLYARCGRIREAFSS 503

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE + +KD I+ N L++G+AQ+GL  EA++VF  M++   +  N  T+VS L A +++  
Sbjct: 504 FEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANLAE 562

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           ++QG +IHARVIK    F+  V   L+ +YGKCG  +DA   F ++   + V WN II+ 
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITS 622

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+G +AL+ F QM  EG++P+ +TF+ +L ACSH GLV EG  YF  M +E+GI+P
Sbjct: 623 CSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRP 682

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY C++D+FGRAG L  A  FI+ MP+  DA +W  LL AC++H N+E+G  A+  L
Sbjct: 683 RPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHL 742

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            E++  +   YVL+SN YA   KW   D+VR + RDRG++K PG S IEV N V  F+ G
Sbjct: 743 LELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 802

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R HP  E+IY+ L  +  ++  +GY  +K  +  D E++ ++     HSE+LA+ FG++
Sbjct: 803 DRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLM 862

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
           S PP  P+++ KNLRV      +  F+ Q
Sbjct: 863 SLPPCMPLRVIKNLRVEKYTSLYANFLHQ 891



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 184/651 (28%), Positives = 327/651 (50%), Gaps = 20/651 (3%)

Query: 48  IDFDDLFQSCT----KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +DF    ++C     +   V  +HA  V  G  K       L++ Y+  G +  +R  F+
Sbjct: 42  LDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE 101

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LV 160
            +S R+  +W +M+S Y + G   EA+  + Q    +G+ P  Y    VL +C       
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMH-RAGVVPTPYVLSSVLSSCTKAELFA 160

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+ IH    K GF  ++FV  +++ +Y R G   +A ++F DMP RD+ ++N +ISG+ 
Sbjct: 161 QGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA 220

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G+   AL+I +EM+  G+S D +T++S+L  CA   ++  G  +H Y+ K G+  +  
Sbjct: 221 QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYI 280

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +  +L+++Y K G +  AL +F+     +VV WN ++ A+ Q ND   +   F  MQ AG
Sbjct: 281 MEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAG 340

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I+P+  T   +        +      +H   ++ G F  D+ +   ++DMY+K G +  A
Sbjct: 341 IRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKA 399

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             V E L  KDV+SW ++I GY Q+    +A+  F+ M++C  I P+     S +   + 
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG-IWPDNIGLASAISGCAG 458

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + A+RQG++IHAR+  +    DV +   LV++Y +CGRI +A S F ++     +  N +
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGL 518

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           +S     G  ++AL  F +M   GV+ +  TFVS L+A ++   + +G++  H    + G
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ-IHARVIKTG 577

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
                +    ++ L+G+ G    A      M  R + S W  ++ +C  HG    G  A 
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQHGR---GLEAL 633

Query: 641 DRLFEVDSENVG----YYVLMSNIYANVG-KWEGVDEVRSLARDRGLKKTP 686
           D   ++  E +      ++ +    ++VG   EG+   +S++ + G++  P
Sbjct: 634 DLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/780 (35%), Positives = 431/780 (55%), Gaps = 11/780 (1%)

Query: 50  FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++CT    +H  K +H + V  G I  +F    ++  Y   G L  +   FD + 
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACR---NLVDG 162
            +N+ +WNS+I  +   G   EA   F     +  GL PD  T   +L  C    N+  G
Sbjct: 273 EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG 332

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
             IH   +KLG   ++ V  +L+ MY + G  + A  LF  +  +   SWN+MI  Y + 
Sbjct: 333 MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSRE 392

Query: 223 GNAVEALDILDEMRLEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           G   E  D+L +M +E   + ++ +T+ ++LP C     +LS   +H Y ++H  ++   
Sbjct: 393 GFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKEL 452

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           ++N  I  YAK G +  A  VF  M  + V SWN++I  + Q+ DPI A  F+  M + G
Sbjct: 453 INNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG 512

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I PD  ++VSL     +L   +  + +HGF++R G  M +  +  +++ +Y         
Sbjct: 513 ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEM-NSFVAVSLLSLYFHCSKPFYG 571

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
              FE +  K+ + WN +++GY+QN L +EA+ +F+ M   + + P++    SIL A S 
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLS-DGLEPDEIAIASILGACSQ 630

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + AL  G ++H   +KN L  D FVA  L+DMY K G +  +  +F ++       WN +
Sbjct: 631 LSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVM 690

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+  G+HGQG+KA+  F  M     +PD  TF+ +L AC H+GLVSEG  Y   MQ  + 
Sbjct: 691 ITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYK 750

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           ++P L+HY C++D+ GRAG L  A NFI  MP  PDA IW +LL +   + ++E+G   +
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFA 810

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           ++L  +++     Y+L+SN+YA  GKW+ V  VR   +D  L+K  G S IE+  KV  F
Sbjct: 811 EKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G  ++P  ++I      L  ++  +GY PD S VL ++EE EK  IL  HSE++AI F
Sbjct: 871 IAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICF 930

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G +++   + ++I KNLR+C DCHN  K+IS+  +REI++RD+ RFHHFK GICSCGDYW
Sbjct: 931 GFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 184/595 (30%), Positives = 312/595 (52%), Gaps = 23/595 (3%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYR 108
           L Q C +  +V   ++L  +L VS +    F  +T+L+  Y+  G    SR  FD +  +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           N++ WN+++S YVR     EA+  F +    +  +PD +TFP ++KAC    D   GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K+G   D+FV  +++ +Y + G  + A +LFD MP ++  SWN++I G+ ++G  
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 226 VEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +EA      +   G  + P   T+ ++LPVC+   N+  G++IH   VK GL   L V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT--MQQAGI 341
            LI+MY+K G +  A  +F ++  + VVSWNS+I AY +               M++  +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + + +T+++L     + ++  + R++HG+ +R   F    +I NA +  YAK G +  A 
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHS-FQYKELINNAFIAAYAKCGSLVFAE 471

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF G+  K V SWN +I G+AQNG   +A++ +  M     I P+  + VS+L A   +
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG-ILPDDFSIVSLLLACGRL 530

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G L+ G +IH  V++N L  + FVA  L+ +Y  C +     + F  +   +SV WNA++
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAML 590

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +  +   ++AL+ FRQML +G+ PD I   S+L ACS    +  G+         F +
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHC-----FAL 645

Query: 582 KPHLKH---YGC-MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           K  L       C ++D++ ++G LG +      +  +  AS W  ++    +HG 
Sbjct: 646 KNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMITGFGVHGQ 699


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/780 (35%), Positives = 431/780 (55%), Gaps = 11/780 (1%)

Query: 50  FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++CT    +H  K +H + V  G I  +F    ++  Y   G L  +   FD + 
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACR---NLVDG 162
            +N+ +WNS+I  +   G   EA   F     +  GL PD  T   +L  C    N+  G
Sbjct: 273 EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG 332

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
             IH   +KLG   ++ V  +L+ MY + G  + A  LF  +  +   SWN+MI  Y + 
Sbjct: 333 MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSRE 392

Query: 223 GNAVEALDILDEMRLEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           G   E  D+L +M +E   + ++ +T+ ++LP C     +LS   +H Y ++H  ++   
Sbjct: 393 GFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKEL 452

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           ++N  I  YAK G +  A  VF  M  + V SWN++I  + Q+ DPI A  F+  M + G
Sbjct: 453 INNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG 512

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I PD  ++VSL     +L   +  + +HGF++R G  M +  +  +++ +Y         
Sbjct: 513 ILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEM-NSFVAVSLLSLYFHCSKPFYG 571

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
              FE +  K+ + WN +++GY+QN L +EA+ +F+ M   + + P++    SIL A S 
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLS-DGLEPDEIAIASILGACSQ 630

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + AL  G ++H   +KN L  D FVA  L+DMY K G +  +  +F ++       WN +
Sbjct: 631 LSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVM 690

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+  G+HGQG+KA+  F  M     +PD  TF+ +L AC H+GLVSEG  Y   MQ  + 
Sbjct: 691 ITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYK 750

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           ++P L+HY C++D+ GRAG L  A NFI  MP  PDA IW +LL +   + ++E+G   +
Sbjct: 751 LEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFA 810

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           ++L  +++     Y+L+SN+YA  GKW+ V  VR   +D  L+K  G S IE+  KV  F
Sbjct: 811 EKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSF 870

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G  ++P  ++I      L  ++  +GY PD S VL ++EE EK  IL  HSE++AI F
Sbjct: 871 IAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICF 930

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G +++   + ++I KNLR+C DCHN  K+IS+  +REI++RD+ RFHHFK GICSCGDYW
Sbjct: 931 GFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 184/595 (30%), Positives = 313/595 (52%), Gaps = 23/595 (3%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYR 108
           L Q C +  +V   ++L  +L VS +    F  +T+L+  Y+  G    SR  FD +  +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           N++ WN+++S YVR     EA+  F +    +  +PD +TFP ++KAC    D   GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +K+G   D+FV  +++ +Y + G  + A +LFD MP ++  SWN++I G+ ++G  
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 226 VEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +EA      +   G  + P   T+ ++LPVC+   N+  G++IH   VK GL   L V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT--MQQAGI 341
            LI+MY+K G +  A  +F ++  + VVSWNS+I AY +               M++  +
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + + +T+++L     + ++  + R++HG+ +R   F    +I NA +  YAK G +  A 
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGYSLRHS-FQYKELINNAFIAAYAKCGSLVFAE 471

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF G+  K V SWN +I G+AQNG   +A++ +  M     I P+  + VS+L A   +
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG-ILPDDFSIVSLLLACGRL 530

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G L+ G +IH  V++N L  + FVA  L+ +Y  C +     + F ++   +SV WNA++
Sbjct: 531 GLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAML 590

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +  +   ++AL+ FRQML +G+ PD I   S+L ACS    +  G+         F +
Sbjct: 591 SGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHC-----FAL 645

Query: 582 KPHLKH---YGC-MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           K  L       C ++D++ ++G LG +      +  +  AS W  ++    +HG 
Sbjct: 646 KNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS-WNVMITGFGVHGQ 699


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/808 (34%), Positives = 430/808 (53%), Gaps = 79/808 (9%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V +   ++N YA LG LS +   F  +  R+V +WN+++S Y + GR  +A++ F     
Sbjct: 95  VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVL----KLGFEWDVFVAASLLHMYCRFGLA 194
           +    P+ +TF   +K+C  L    ++   +L    K GF+ D  VA  ++ M+ R G  
Sbjct: 155 SGDSLPNAFTFGCAMKSCGAL-GWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAV 213

Query: 195 NVARK-------------------------------LFDDMPVRDSGSWNAMISGYCQSG 223
           + A K                               LF+ MP RD  SWN M+S   QSG
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            A EAL +  +M   GV +D  T  S L  CA+  ++  G  +H  +++     + +V++
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            ++ +YAK G  + A RVF  + +R+ VSW  +I  + Q      +   F  M+   +  
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTV 393

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D   L ++ S  +   D   +R +H   ++ G     V+I N+++ MYAK G + +A ++
Sbjct: 394 DQFALATIISGCSNRMDMCLARQLHSLSLKSG-HTRAVVISNSLISMYAKCGNLQNAESI 452

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN------------------ 445
           F  +  +D++SW  ++T Y+Q G   +A E F  M   N I                   
Sbjct: 453 FSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGL 512

Query: 446 -------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
                        P+  TYV++    + +GA + G +I    +K  L  D  V   ++ M
Sbjct: 513 KMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITM 572

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCGRI +A  +F  + R   V WNA+I+ +  HG G +A+  F  ML +G +PD+I++
Sbjct: 573 YSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISY 632

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           V++L++CSHSGLV EG+ YF M++ +  + P L+H+ CMVDL  RAG+L  A N I  MP
Sbjct: 633 VAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMP 692

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           ++P A +WGALL AC+ HGN EL  +A+  LF++DS + G Y+L++ IYA+ GK     +
Sbjct: 693 MKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQ 752

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           VR L RD+G+KK PG+S +EV NKV +F   + +HP+   I ++L  L  K+  LGYV  
Sbjct: 753 VRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRT 812

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
           +S   +             HSE+LA+AFGI++ P   PI I KNLR+CGDCH   K IS 
Sbjct: 813 ESLRSE-----------IHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLIST 861

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +T RE ++RD+ RFHHFK G CSCGDYW
Sbjct: 862 VTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 277/549 (50%), Gaps = 52/549 (9%)

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           TVF    ++  YA    +  +   F+ +  R+V +WN M+S   + GR  EA+       
Sbjct: 227 TVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMH 286

Query: 138 LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
              G+R D  T+   L AC  L     GK++H  V++     D +VA++++ +Y + G  
Sbjct: 287 -NRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCF 345

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR++F  +  R++ SW  +I G+ Q G   E+L++ ++MR E +++D   +A+I+  C
Sbjct: 346 KEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGC 405

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           +   ++     +H   +K G    + +SN+LI+MYAK G +++A  +F  M ERD+VSW 
Sbjct: 406 SNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWT 465

Query: 315 SIIAAYEQSNDPITAHGFFTTM--------------------QQAGIQ------------ 342
            ++ AY Q  +   A  FF  M                    ++ G++            
Sbjct: 466 GMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVI 525

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD +T V+L    A +   +    + G  ++ G  + D  + NAV+ MY+K G I+ A  
Sbjct: 526 PDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLIL-DTSVMNAVITMYSKCGRISEARK 584

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ L  KD++SWN +ITGY+Q+G+  +AIE+F  M +     P+  +YV++L + SH G
Sbjct: 585 IFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLK-KGAKPDYISYVAVLSSCSHSG 643

Query: 463 ALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
            +++G K +  ++K     D  V+      +C+VD+  + G + +A +L  ++P + ++ 
Sbjct: 644 LVQEG-KFYFDMLKR----DHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE 698

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A++S    HG  + A    + + D    PD   ++ L    + +G   +  +   +M
Sbjct: 699 VWGALLSACKTHGNNELAELAAKHLFDLD-SPDSGGYMLLAKIYADAGKSVDSAQVRKLM 757

Query: 576 QEEFGIKPH 584
           +++ GIK +
Sbjct: 758 RDK-GIKKN 765



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 184/428 (42%), Gaps = 75/428 (17%)

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           E N+   N ++N YAK G +  A  +F +M  RDV SWN++++ Y QS   + A   F +
Sbjct: 92  EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151

Query: 336 MQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           M+++G   P+  T          L     +  + G + + G F  D  +   +VDM+ + 
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFG-FQGDPDVATGIVDMFVRC 210

Query: 395 GI-------------------------------INSACAVFEGLPVKDVISWNTLITGYA 423
           G                                ++ A  +FE +P +DV+SWN +++  +
Sbjct: 211 GAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALS 270

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q+G A EA+ V   M     +  +  TY S L A + + +L  G ++HA+VI++  C D 
Sbjct: 271 QSGRAREALSVAVDMHN-RGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           +VA+ +V++Y KCG   +A  +F  +   ++V W  +I     +G   ++L  F QM  E
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAE 389

Query: 544 GVRPDHITFVSLLTACS-----------HS------------------------GLVSEG 568
            +  D     ++++ CS           HS                        G +   
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNA 449

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
           +  F  M+E       +  +  M+  + + G++G A  F   M  R +   W A+LGA  
Sbjct: 450 ESIFSSMEER-----DIVSWTGMLTAYSQVGNIGKAREFFDGMSTR-NVITWNAMLGAYI 503

Query: 629 IHGNMELG 636
            HG  E G
Sbjct: 504 QHGAEEDG 511



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 208/489 (42%), Gaps = 74/489 (15%)

Query: 30  AANSLQISPDCLENESREID---FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSST 83
           A  +L ++ D + N    +D   +     +C KL  +   K+LHA ++ S      + ++
Sbjct: 275 AREALSVAVD-MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
            +V  YA  G    +R  F  +  RN  +W  +I  +++ G  SE+++ F Q      + 
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMR-AELMT 392

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
            D +    ++  C N +D    +++H   LK G    V ++ SL+ MY + G    A  +
Sbjct: 393 VDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESI 452

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL--------------------EGV 240
           F  M  RD  SW  M++ Y Q GN  +A +  D M                      +G+
Sbjct: 453 FSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGL 512

Query: 241 SM------------DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            M            D +T  ++   CA       G  I  + VK GL  +  V N +I M
Sbjct: 513 KMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITM 572

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y+K G +  A ++FD +  +D+VSWN++I  Y Q      A   F  M + G +PD +  
Sbjct: 573 YSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYI-- 630

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDMYAKLGII 397
               S VA L+ C      H  +++ G F  D++  +            +VD+ A+ G +
Sbjct: 631 ----SYVAVLSSCS-----HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNL 681

Query: 398 NSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
             A  + + +P+K     W  L++    +  N LA  A +    ++     +P+ G Y+ 
Sbjct: 682 IEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLD-----SPDSGGYML 736

Query: 454 ILPAYSHVG 462
           +   Y+  G
Sbjct: 737 LAKIYADAG 745


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/637 (41%), Positives = 387/637 (60%), Gaps = 35/637 (5%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+  Y   G     R +FD++P ++   +N MI  Y  +    +AL +   M   G+  D
Sbjct: 77  LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T   +L   + S+++  G+ IH  +V+ GL+ N+FV N LI+MY K G +  A RV D
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           QM  RDVVSWNS++A   ++     A      M+  G++PD  T+ SL   V   N C +
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT--NTCLD 254

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
           + S                    V +M+ KL               K ++SWN +I  Y 
Sbjct: 255 NVSF-------------------VKEMFMKLA-------------NKSLVSWNVMIAVYM 282

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            N + +EA+++F  ME+ + ++P+  +  S+LPA   + AL  G +IH  V++  L  ++
Sbjct: 283 NNSMPAEAVDIFLQMED-HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNL 341

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            +   L+DMY KCG ++ A  +F Q+     V W ++IS +G++G+G  A++ F +M D 
Sbjct: 342 LLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 401

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           G+ PD I FVS+L+ACSH+GL+ EG+ YF +M EE  I P ++H+ CMVDL GRAG +  
Sbjct: 402 GLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDE 461

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           A+ FI+ MP+ P+  +WGALL ACR++ NM +G +A+D+LF++  E  GYYVL+SNIYA 
Sbjct: 462 AYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAK 521

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
            G+WE V  VRS+ + +G+KK PG S+ E++N+V  F  G+++HP+ ++IY+EL     K
Sbjct: 522 AGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGK 581

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           MK  GYVP+    L DVEE++KE  L  HSE+LAIAF I+++ P SPI+I KNLRVCGDC
Sbjct: 582 MKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDC 641

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H   K IS+I  REI +RD+NRFHHF +G+CSCGDYW
Sbjct: 642 HIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 242/471 (51%), Gaps = 46/471 (9%)

Query: 60  LHHVKRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           + ++K+LH+ + +   + +  S   KL+  YA  G+   +RH FD I  +NV  +N MI 
Sbjct: 51  IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIR 110

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            YV     S+A+  F       G+ PD YT+P VLKA     D   G +IH +V+++G +
Sbjct: 111 SYVNNHLYSDALLVFKNMA-GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 169

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            +VFV   L+ MY + G    A ++ D MP RD  SWN++++G  ++G   +AL++  EM
Sbjct: 170 LNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 229

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            L G+  D  T+AS+LP       + +  L ++  VK                       
Sbjct: 230 ELLGLKPDAGTMASLLPA------VTNTCLDNVSFVK----------------------- 260

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
                +F ++  + +VSWN +IA Y  ++ P  A   F  M+   + PD +++ S+    
Sbjct: 261 ----EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
             L+     R +H +++R+     ++++ NA++DMYAK G +  A  VF+ +  +DV+SW
Sbjct: 317 GDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 375

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG---IKIHA 472
            ++I+ Y  NG   +A+ +F  M++   +NP+   +VS+L A SH G L +G    K+  
Sbjct: 376 TSMISAYGMNGKGRDAVSLFSRMQDLG-LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMT 434

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
              K     + FV  C+VD+ G+ G++D+A     Q+P   +   W A++S
Sbjct: 435 EECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS 483



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 180/402 (44%), Gaps = 40/402 (9%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++HA +V  G    VF    L++ Y   G L  +    D +  R+V +WNS+++   R G
Sbjct: 158 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNG 217

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
           +  +A++   +  L  GL+PD  T   +L A  N                          
Sbjct: 218 QFDDALEVCKEMELL-GLKPDAGTMASLLPAVTNTC------------------------ 252

Query: 185 LHMYCRFGLANVA--RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
                   L NV+  +++F  +  +   SWN MI+ Y  +    EA+DI  +M    V  
Sbjct: 253 --------LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 304

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D I++AS+LP C     +L G  IH Y+V+  L+ NL + N LI+MYAK G + +A  VF
Sbjct: 305 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 364

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           DQM  RDVVSW S+I+AY  +     A   F+ MQ  G+ PD +  VS+ S  +      
Sbjct: 365 DQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLD 424

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
             R     +      +  +     +VD+  + G ++ A    + +P++ +   W  L++ 
Sbjct: 425 EGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484

Query: 422 -YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
               + +    +   Q+ + C E     G YV +   Y+  G
Sbjct: 485 CRVYSNMIIGLLAADQLFQLCPE---QSGYYVLLSNIYAKAG 523


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/637 (41%), Positives = 388/637 (60%), Gaps = 35/637 (5%)

Query: 184  LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
            L+  Y   G     R +FD++P ++   +N MI  Y  +    +AL +   M   G+  D
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125

Query: 244  PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
              T   +L   + S+++  G+ IH  +V+ GL+ N+FV N LI+MY K G +  A RV D
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185

Query: 304  QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            ZM  RDVVSWNS++A   ++     A      M+  G++PD  T+ SL   V   N C +
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT--NTCLD 1243

Query: 364  SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + S                    V +M+ KL               K ++SWN +I  Y 
Sbjct: 1244 NVSF-------------------VKEMFMKLA-------------NKSLVSWNVMIAVYM 1271

Query: 424  QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
             N + +EA+++F  ME+ + ++P+  +  S+LPA   + AL  G +IH  V++  L  ++
Sbjct: 1272 NNSMPAEAVDIFLQMED-HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNL 1330

Query: 484  FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
             +   L+DMY KCG ++ A  +F Q+     V W ++IS +G++G+G  A++ F +M D 
Sbjct: 1331 LLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 1390

Query: 544  GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
            G+ PD I FVS+L+ACSH+GL+ EG+ YF +M EE  I P ++H+ CMVDL GRAG +  
Sbjct: 1391 GLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDE 1450

Query: 604  AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
            A+ FI+ MP+ P+  +WGALL ACR++ NM +G +A+D+LF++  E  GYYVL+SNIYA 
Sbjct: 1451 AYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAK 1510

Query: 664  VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
             G+WE V  VRS+ + +G+KK PG S+ E++N+V  F  G+++HP+ ++IY+EL  L  K
Sbjct: 1511 AGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGK 1570

Query: 724  MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
            MK  GYVP+    L DVEE++KE  L  HSE+LAIAF I+++ P SPI+I KNLRVCGDC
Sbjct: 1571 MKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDC 1630

Query: 784  HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            H   K IS+I  REI +RD+NRFHHF +G+CSCGDYW
Sbjct: 1631 HIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 243/471 (51%), Gaps = 46/471 (9%)

Query: 60   LHHVKRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
            + ++K+LH+ + +   + +  S   KL+  YA  G+   +RH FD I  +NV  +N MI 
Sbjct: 1040 IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIR 1099

Query: 119  VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
             YV     S+A+  F       G+ PD YT+P VLKA     D   G +IH +V+++G +
Sbjct: 1100 SYVNNHLYSDALLVFKNMA-GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 1158

Query: 176  WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
             +VFV   L+ MY + G    A ++ D+MP RD  SWN++++G  ++G   +AL++  EM
Sbjct: 1159 LNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEM 1218

Query: 236  RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
             L G+  D  T+AS+LP       + +  L ++  VK                       
Sbjct: 1219 ELLGLKPDAGTMASLLPA------VTNTCLDNVSFVK----------------------- 1249

Query: 296  RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
                 +F ++  + +VSWN +IA Y  ++ P  A   F  M+   + PD +++ S+    
Sbjct: 1250 ----EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305

Query: 356  AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
              L+     R +H +++R+     ++++ NA++DMYAK G +  A  VF+ +  +DV+SW
Sbjct: 1306 GDLSALLLGRRIHEYVVRKR-LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSW 1364

Query: 416  NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG---IKIHA 472
             ++I+ Y  NG   +A+ +F  M++   +NP+   +VS+L A SH G L +G    K+  
Sbjct: 1365 TSMISAYGMNGKGRDAVSLFSRMQDLG-LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMT 1423

Query: 473  RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
               K     + FV  C+VD+ G+ G++D+A     Q+P   +   W A++S
Sbjct: 1424 EECKIVPRIEHFV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS 1472



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 180/402 (44%), Gaps = 40/402 (9%)

Query: 65   RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
            ++HA +V  G    VF    L++ Y   G L  +    D +  R+V +WNS+++   R G
Sbjct: 1147 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNG 1206

Query: 125  RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
            +  +A++   +  L  GL+PD  T   +L A  N                          
Sbjct: 1207 QFDDALEVCKEMELL-GLKPDAGTMASLLPAVTNTC------------------------ 1241

Query: 185  LHMYCRFGLANVA--RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
                    L NV+  +++F  +  +   SWN MI+ Y  +    EA+DI  +M    V  
Sbjct: 1242 --------LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 1293

Query: 243  DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
            D I++AS+LP C     +L G  IH Y+V+  L+ NL + N LI+MYAK G + +A  VF
Sbjct: 1294 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 1353

Query: 303  DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
            DQM  RDVVSW S+I+AY  +     A   F+ MQ  G+ PD +  VS+ S  +      
Sbjct: 1354 DQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLD 1413

Query: 363  NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
              R     +      +  +     +VD+  + G ++ A    + +P++ +   W  L++ 
Sbjct: 1414 EGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473

Query: 422  -YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
                + +    +   Q+ + C E     G YV +   Y+  G
Sbjct: 1474 CRVYSNMIIGLLAADQLFQLCPE---QSGYYVLLSNIYAKAG 1512


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/756 (36%), Positives = 419/756 (55%), Gaps = 76/756 (10%)

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
           H    + Y   +  N++IS Y + G +  A   F Q        P+ Y++  +L A    
Sbjct: 34  HIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP-----HPNLYSWNTILSA---- 84

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
                                       Y + G  +    LFD MP RD  SWN++ISGY
Sbjct: 85  ----------------------------YSKLGRVSEMEYLFDAMPRRDGVSWNSLISGY 116

Query: 220 CQSG---NAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
              G    +V+A +++  ++ +G  +++ IT +++L + ++   +  G  IH ++VK G 
Sbjct: 117 AGCGLIYQSVKAYNLM--LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGF 174

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQ------------------------------- 304
              +FV + L++MY+K GM+  A +VFD+                               
Sbjct: 175 MSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFE 234

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M ERD +SW S+I  + Q+     A   F  M+   +Q D  T  S+ +    +   +  
Sbjct: 235 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           + VH +I+R   + +++ + +A+VDMY K   I SA AVF+ +  K+V+SW  ++ GY Q
Sbjct: 295 KQVHAYIIRTD-YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ 353

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NG + EA++ F  M++   I P+  T  S++ + +++ +L +G + HAR + + L   + 
Sbjct: 354 NGYSEEAVKTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 412

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V+  LV +YGKCG I+D+  LF ++     V W A++S +   G+ ++ +  F  ML  G
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 472

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           ++PD +TF+ +L+ACS +GLV +G + F  M  E GI P   HY CM+DLF RAG +  A
Sbjct: 473 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEA 532

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
            NFI  MP  PDA  W  LL +CR +GNM++G  A++ L E+D  N   YVL+S++YA  
Sbjct: 533 RNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAK 592

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           GKWE V  +R   RD+GL+K PG S I+  N+V +F   ++++P  ++IY EL  L  KM
Sbjct: 593 GKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKM 652

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
              GYVPD + VL DV + EK  +L  HSE+LAIAFG++  PP  PI++ KNLRVC DCH
Sbjct: 653 IKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCH 712

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           N TK+IS+IT REI+VRD+ RFH FKDG CSCGD+W
Sbjct: 713 NATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 270/552 (48%), Gaps = 77/552 (13%)

Query: 53  LFQSCTKLHH---VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L + C + H+    K LH+ ++ +      F    L++ YA LG + ++   FD + + N
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTSG-----------------LR 143
           +Y+WN+++S Y + GR+SE    F            +L SG                 L+
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134

Query: 144 PD------FYTFPPVL-----KACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            D        TF  +L     + C  L  G++IH  V+K GF   VFV + L+ MY + G
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKL--GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192

Query: 193 LANVARKLFDDMP-------------------------------VRDSGSWNAMISGYCQ 221
           + + ARK+FD++P                                RDS SW +MI+G+ Q
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   +A+DI  EM+LE + MD  T  S+L  C     +  G  +H YI++   + N+FV
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           ++ L++MY K   ++ A  VF +M  ++VVSW +++  Y Q+     A   F+ MQ+ GI
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD  TL S+ S  A L         H   +  G  +  + + NA+V +Y K G I  + 
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSG-LISFITVSNALVTLYGKCGSIEDSH 431

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F  +  KD ++W  L++GYAQ G A+E I +F+ M   + + P++ T++ +L A S  
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESM-LAHGLKPDKVTFIGVLSACSRA 490

Query: 462 GALRQGIKIHARVIKNCLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNA 519
           G + +G +I   +I       +    TC++D++ + GRI++A +   ++P S  ++ W  
Sbjct: 491 GLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWAT 550

Query: 520 IISCHGIHGQGD 531
           ++S    +G  D
Sbjct: 551 LLSSCRFYGNMD 562



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 216/442 (48%), Gaps = 68/442 (15%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           ++L +C  + N      +H +I+K       F+ NNLI+ YAK G + +A +VFDQM   
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 309 DVVSWNSIIAAYEQ---------------SNDPITAHGFFTTMQQAGI------------ 341
           ++ SWN+I++AY +                 D ++ +   +     G+            
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 342 ------QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
                   + +T  +L  + ++    +  R +HG +++ G FM  V +G+ +VDMY+K+G
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFG-FMSYVFVGSPLVDMYSKMG 192

Query: 396 IINSACAVFEGLPVKDV-------------------------------ISWNTLITGYAQ 424
           +I+ A  VF+ LP K+V                               ISW ++ITG+ Q
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NGL  +AI++F+ M+  N +  +Q T+ S+L A   V AL++G ++HA +I+     ++F
Sbjct: 253 NGLDRDAIDIFREMKLEN-LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           VA+ LVDMY KC  I  A ++F ++   + V W A++  +G +G  ++A+  F  M   G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           + PD  T  S++++C++   + EG + FH      G+   +     +V L+G+ G +  +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 605 HNFIQNMPVRPDASIWGALLGA 626
           H     +  + D   W AL+  
Sbjct: 431 HRLFNEISFK-DEVTWTALVSG 451



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 224/483 (46%), Gaps = 54/483 (11%)

Query: 28  SAAANSLQISPDCLENESREIDFDDLF-----QSCTKLHHVKRLHALLVVSGKIKTVFSS 82
           S  A +L +  D   N +R I F  L      + C KL   +++H  +V  G +  VF  
Sbjct: 125 SVKAYNLMLKNDGSFNLNR-ITFSTLLILASKRGCVKLG--RQIHGHVVKFGFMSYVFVG 181

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE-------------- 128
           + LV+ Y+ +G +S +R  FD +  +NV  +N++I   +RCGR+ +              
Sbjct: 182 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 241

Query: 129 -----------------AVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCS 168
                            A+D F +  L + L+ D YTF  VL AC     L +GK++H  
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLEN-LQMDQYTFGSVLTACGGVMALQEGKQVHAY 300

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           +++  ++ ++FVA++L+ MYC+      A  +F  M  ++  SW AM+ GY Q+G + EA
Sbjct: 301 IIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           +    +M+  G+  D  T+ S++  CA   ++  G   H   +  GL   + VSN L+ +
Sbjct: 361 VKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 420

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G +  + R+F+++  +D V+W ++++ Y Q        G F +M   G++PD +T 
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           + + S  ++         +   ++     +        ++D++++ G I  A      +P
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540

Query: 409 VK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGA 463
              D ISW TL++    Y    +   A E         E++P N  +YV +   Y+  G 
Sbjct: 541 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLM------ELDPHNTASYVLLSSVYAAKGK 594

Query: 464 LRQ 466
             +
Sbjct: 595 WEE 597



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 4/130 (3%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y ++L          +   +H+ +IK     + F+   L+  Y K G I  A  +F Q+P
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
             +   WN I+S +   G+    ++    + D   R D +++ SL++  +  GL+ +  +
Sbjct: 72  HPNLYSWNTILSAYSKLGR----VSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127

Query: 571 YFHMMQEEFG 580
            +++M +  G
Sbjct: 128 AYNLMLKNDG 137


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/658 (40%), Positives = 392/658 (59%), Gaps = 36/658 (5%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K +H  V  L F  +  +   L+  Y   G   +AR +FD +P R+   +N MI  Y  +
Sbjct: 52  KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNN 111

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               +AL +  +M   G S D  T   +L  C+ SDN+  GL +H  + K GL+ NLFV 
Sbjct: 112 HLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVG 171

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N LI +Y K G +  A  V D+M  +DVVSWNS++A Y Q+     A      M     +
Sbjct: 172 NGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQK 231

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  T+ SL   V       N+ S            E+V        +Y +         
Sbjct: 232 PDACTMASLLPAVT------NTSS------------ENV--------LYVE--------E 257

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F  L  K ++SWN +I+ Y +N +  ++++++  M +C E+ P+  T  S+L A   + 
Sbjct: 258 MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKC-EVEPDAITCASVLRACGDLS 316

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G +IH  V +  LC ++ +   L+DMY +CG ++DA  +F ++       W ++IS
Sbjct: 317 ALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLIS 376

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+ GQG  A+  F +M + G  PD I FV++L+ACSHSGL++EG+ YF  M +++ I 
Sbjct: 377 AYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKIT 436

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++H+ C+VDL GR+G +  A+N I+ MP++P+  +WGALL +CR++ NM++G +A+D+
Sbjct: 437 PIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADK 496

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L ++  E  GYYVL+SNIYA  G+W  V  +RSL + R ++K PG S++E+NN+V  F  
Sbjct: 497 LLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLA 556

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+  HP+ ++IY+EL  L  KMK LGYVP     L DVEE++KE  L  HSE+LAI F I
Sbjct: 557 GDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAI 616

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +++  +SPI+I KNLRVCGDCH   K IS+I +REI++RD+NRFHHFKDGICSCGDYW
Sbjct: 617 LNT-QESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 230/456 (50%), Gaps = 47/456 (10%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL+  YA  G+   +R+ FD I  RNV  +N MI  Y+      +A+  F    ++ G  
Sbjct: 72  KLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDM-VSGGFS 130

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YT+P VLKAC    NL  G ++H +V K+G + ++FV   L+ +Y + G    AR +
Sbjct: 131 PDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCV 190

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSD 258
            D+M  +D  SWN+M++GY Q+    +ALDI  EM  +GV   P   T+AS+LP    + 
Sbjct: 191 LDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM--DGVRQKPDACTMASLLPAVTNTS 248

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           +                E  L+V    +N+  K                  +VSWN +I+
Sbjct: 249 S----------------ENVLYVEEMFMNLEKK-----------------SLVSWNVMIS 275

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y +++ P  +   +  M +  ++PD +T  S+      L+     R +H ++ R+    
Sbjct: 276 VYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKK-LC 334

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            ++++ N+++DMYA+ G +  A  VF+ +  +DV SW +LI+ Y   G    A+ +F  M
Sbjct: 335 PNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEM 394

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKC 496
           +   + +P+   +V+IL A SH G L +G K + + + +       +    CLVD+ G+ 
Sbjct: 395 QNSGQ-SPDSIAFVAILSACSHSGLLNEG-KFYFKQMTDDYKITPIIEHFACLVDLLGRS 452

Query: 497 GRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           GR+D+A ++  Q+P + +   W A++S   ++   D
Sbjct: 453 GRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMD 488



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 161/360 (44%), Gaps = 38/360 (10%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH  +   G    +F    L+  Y   G L  +R   D +  ++V +WNSM++ Y +  
Sbjct: 154 QLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNM 213

Query: 125 RLSEAVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAA 182
           +  +A+D   +     G+R  PD  T   +L A  N      ++   + +  E    V  
Sbjct: 214 QFDDALDICREM---DGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLV-- 268

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
                                       SWN MIS Y ++    +++D+  +M    V  
Sbjct: 269 ----------------------------SWNVMISVYMKNSMPGKSVDLYLQMGKCEVEP 300

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D IT AS+L  C     +L G  IH Y+ +  L  N+ + N+LI+MYA+ G +  A RVF
Sbjct: 301 DAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVF 360

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D+M  RDV SW S+I+AY  +     A   FT MQ +G  PD +  V++ S  +  +   
Sbjct: 361 DRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSH-SGLL 419

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLIT 420
           N    +   M   + +  +I   A +VD+  + G ++ A  + + +P+K +   W  L++
Sbjct: 420 NEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLS 479



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 9/184 (4%)

Query: 42  ENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           E E   I    + ++C  L  +   +R+H  +        +     L++ YA  G L  +
Sbjct: 297 EVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDA 356

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
           +  FD + +R+V +W S+IS Y   G+   AV  F +    SG  PD   F  +L AC +
Sbjct: 357 KRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQ-NSGQSPDSIAFVAILSACSH 415

Query: 159 --LVDGKKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWN 213
             L++  K +   +   ++    +   A L+ +  R G  + A  +   MP++ +   W 
Sbjct: 416 SGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWG 475

Query: 214 AMIS 217
           A++S
Sbjct: 476 ALLS 479


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/749 (37%), Positives = 423/749 (56%), Gaps = 39/749 (5%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-----G 162
           R+  ++NS+IS      R   A+D      + +      +T   VL AC +L D     G
Sbjct: 116 RDAVSYNSLISALCLFRRWGHALDALRD--MLADHEVSSFTLVSVLLACSHLADQGHRLG 173

Query: 163 KKIHCSVLKLGF---EWDVFVAASLLHMYCRFGLANVARKLF--DDMPVRDSGSWNAMIS 217
           ++ H   LK GF     + F   +LL MY R GL + A++LF      V D  +WN MIS
Sbjct: 174 REAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMIS 233

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LE 276
              Q G   EA+ +L +M   GV  D +T AS LP C+R + +  G  +H +++K   L 
Sbjct: 234 LLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLA 293

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAAYEQSN--DPITAHGF 332
            N FV++ L++MYA    + HA RVFD + E  R +  WN++I  Y Q    D      F
Sbjct: 294 ANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELF 353

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
                +AG  P   T+  +    A+        +VHG++++R     +  + NA++DMYA
Sbjct: 354 SRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRD-MASNRFVQNALMDMYA 412

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME------------- 439
           +LG ++ A  +F  + ++D++SWNTLITG    GL SEA ++ + M+             
Sbjct: 413 RLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLE 472

Query: 440 ------ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
                 +     PN  T +++LP  + + A  +G +IH   +++ L  D+ V + LVDMY
Sbjct: 473 GDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMY 532

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITF 552
            KCG +  A ++F ++PR + + WN +I  +G+HG GD+AL  F +M+  G   P+ +TF
Sbjct: 533 AKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTF 592

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM- 611
           ++ L ACSHSGLV  G   F  M+ ++G +P    + C+VD+ GRAG L  A+  I +M 
Sbjct: 593 IAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMA 652

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P     S W  +LGACR+H N++LG +A++RLFE++ +   +YVL+ NIY+  G WE   
Sbjct: 653 PGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENST 712

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           EVR + R RG+ K PG S IE++  +  F  G   HP+  +++  +  L  +M+  GYVP
Sbjct: 713 EVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVP 772

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D S VL DV+E EK  +L  HSE+LAIAFG++ +PP + I++ KNLRVC DCH   KFIS
Sbjct: 773 DTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFIS 832

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++  REI++RD  RFHHF+DG CSCGDYW
Sbjct: 833 RMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 199/426 (46%), Gaps = 52/426 (12%)

Query: 33  SLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKT-VFSSTKLVNF 88
           +L + PD        + F     +C++L  +   + +HA ++    +    F ++ LV+ 
Sbjct: 253 ALGVRPD-------GVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDM 305

Query: 89  YANLGDLSFSRHTFDHISY--RNVYTWNSMISVYVRCGRL-SEAVDCFYQFTLTSGLRPD 145
           YA+   +S +R  FD +    R +  WN+MI  Y + G +  EA++ F +    +G  P 
Sbjct: 306 YASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPS 365

Query: 146 FYTFPPVLKAC--RNLVDGKK-IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
             T   VL AC    +  GK+ +H  V+K     + FV  +L+ MY R G  + A  +F 
Sbjct: 366 ETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFA 425

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-----EGVSM--------------- 242
            + +RD  SWN +I+G    G   EA  ++ EM+L      G +M               
Sbjct: 426 MIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMP 485

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           + IT+ ++LP CA       G  IH Y V+H LE +L V + L++MYAK G +  A  VF
Sbjct: 486 NNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVF 545

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDC 361
           D++  R+V++WN +I AY        A   F  M   G   P+ +T       +A L  C
Sbjct: 546 DRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTF------IAALAAC 599

Query: 362 RNS----RSVHGFI-MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVKD--VI 413
            +S    R +  F  M+R +  E     +A VVD+  + G ++ A  +   +   +  V 
Sbjct: 600 SHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVS 659

Query: 414 SWNTLI 419
           +W+T++
Sbjct: 660 AWSTML 665



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 23/367 (6%)

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAA---YEQSNDPITAHGFFTT 335
           VSN L+  YA+ G +  AL +F       RD VS+NS+I+A   + +    + A      
Sbjct: 87  VSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDA----LR 142

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDC--RNSRSVHGFIMRRGWFME--DVIIGNAVVDMY 391
              A  +    TLVS+    + L D   R  R  H F ++ G+  +  +    NA++ MY
Sbjct: 143 DMLADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMY 202

Query: 392 AKLGIINSACAVF--EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           A+LG+++ A  +F   G  V D+++WNT+I+   Q G   EA++V   M     + P+  
Sbjct: 203 ARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG-VRPDGV 261

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
           T+ S LPA S +  L  G ++HA V+K + L  + FVA+ LVDMY    ++  A  +F  
Sbjct: 262 TFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDM 321

Query: 509 VPRSSSV--PWNAIISCHGIHGQGD-KALNFFRQMLDE-GVRPDHITFVSLLTACSHSGL 564
           VP        WNA+I  +  HG  D +A+  F +M  E G  P   T   +L AC+ S +
Sbjct: 322 VPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEV 381

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            + G+   H    +  +  +      ++D++ R G +  AH     + +R D   W  L+
Sbjct: 382 FT-GKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLR-DIVSWNTLI 439

Query: 625 GACRIHG 631
             C + G
Sbjct: 440 TGCIVQG 446



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 29/337 (8%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V        F    L++ YA LG +  +   F  I  R++ +WN++I+  +  G 
Sbjct: 388 VHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGL 447

Query: 126 LSEAVDCFYQFTLTS-----------------GLR--PDFYTFPPVLKACRNL---VDGK 163
           +SEA     +  L S                 G R  P+  T   +L  C  L     GK
Sbjct: 448 ISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGK 507

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH   ++   E D+ V ++L+ MY + G   +AR +FD +P R+  +WN +I  Y   G
Sbjct: 508 EIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHG 567

Query: 224 NAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFV 281
              EAL + D M   G  + + +T  + L  C+ S  +  GL L       +G E   ++
Sbjct: 568 LGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYL 627

Query: 282 SNNLINMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
              ++++  + G +  A  +   M   E  V +W++++ A     +     G     +  
Sbjct: 628 HACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRN--VKLGRIAAERLF 685

Query: 340 GIQPDLLT-LVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
            ++PD  +  V L +I +      NS  V G + +RG
Sbjct: 686 ELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRG 722



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 13/306 (4%)

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV-IIGNAVVDMYAKLGIINSACA 402
           D   L       A L D R++R++HG  +RR         + NA++  YA+ G +++A A
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 403 VFEGLP--VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
           +F   P  ++D +S+N+LI+          A++  + M   +E+  +  T VS+L A SH
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEV--SSFTLVSVLLACSH 164

Query: 461 VG--ALRQGIKIHARVIKNCLC---FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS- 514
           +     R G + HA  +K+       + F    L+ MY + G +DDA  LF+        
Sbjct: 165 LADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGD 224

Query: 515 -VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V WN +IS     G+ ++A+     M+  GVRPD +TF S L ACS   L+  G+    
Sbjct: 225 LVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHA 284

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP-DASIWGALLGACRIHGN 632
            + ++  +  +      +VD++     +  A      +P       +W A++     HG 
Sbjct: 285 FVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGG 344

Query: 633 MELGAV 638
           M+  A+
Sbjct: 345 MDEEAI 350



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 7/164 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V       +   + LV+ YA  G L+ +R  FD +  RNV TWN +I  Y   
Sbjct: 507 KEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMH 566

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLK-LGFEWDVF 179
           G   EA+  F +        P+  TF   L AC +  LVD G ++   + +  GFE   +
Sbjct: 567 GLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPY 626

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDS--GSWNAMISGYCQ 221
           + A ++ +  R G  + A  +   M   +    +W+ M+ G C+
Sbjct: 627 LHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTML-GACR 669


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/738 (36%), Positives = 420/738 (56%), Gaps = 68/738 (9%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASL--------------------- 184
           +  +LK C   +N    KK+HC +LK   + + F++ +L                     
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 185 ----------LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
                     L +Y + GL +  +++F+ MP RD  SWN  ISGY   G+  +A+ +   
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 235 M-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           M +   ++++ IT +++L +C++   +  G  I+  I+K G   ++FV + L++MY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 294 MMRHALRVFDQMMERDVV-------------------------------SWNSIIAAYEQ 322
           ++  A R FD+M ER+VV                               SW  +I    Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           +     A   F  M+ AG   D  T  S+ +    L      + +H +++R     ++V 
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD-HKDNVF 306

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G+A+VDMY+K   I SA  VF+ +P K+VISW  ++ GY QNG + EA+++F  M+  N
Sbjct: 307 VGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR-N 365

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + P+  T  S++ + +++ +L +G + H R + + L   + V+  L+ +YGKCG  +++
Sbjct: 366 GVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENS 425

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             LF ++     V W A+++ +   G+ ++ +  F +ML  G++PD +TF+ +L+ACS +
Sbjct: 426 HRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRA 485

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV +G +YF  M +E GI P + H  C++DL GRAG L  A NFI NMP  PD   W  
Sbjct: 486 GLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWAT 545

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LL +CR+HG+ME+G  A+D L  ++ +N   YVL+S++YA+ GKW+ V ++R   RD+ +
Sbjct: 546 LLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRV 605

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           +K PG+S I+   KV +F   +++ P   +IY EL  L  KM   GYVPD S VL DVEE
Sbjct: 606 RKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEE 665

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
            EK  +L  HSE+LAIAFG+I  PP  PI++ KNLRVCGDCHN TKFIS+IT+REI+VRD
Sbjct: 666 SEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRD 725

Query: 803 SNRFHHFKDGICSCGDYW 820
           + RFH FKDG CSCGD+W
Sbjct: 726 AVRFHLFKDGTCSCGDFW 743



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 208/464 (44%), Gaps = 43/464 (9%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I F  +   C+K   V   ++++  ++  G    VF  + LV+ Y  LG +  ++  FD 
Sbjct: 139 ITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDE 198

Query: 105 ISYRNVYTWNSMISVYVRCGRLSE-------------------------------AVDCF 133
           +  RNV   N+MI+  +RCG + E                               A+D F
Sbjct: 199 MPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMF 258

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
            +  L +G   D +TF  VL AC +L+   +GK+IH  V++   + +VFV ++L+ MY +
Sbjct: 259 REMRL-AGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSK 317

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
                 A  +F  MP ++  SW AM+ GY Q+G + EA+ I  EM+  GV  D  T+ S+
Sbjct: 318 CRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSV 377

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           +  CA   ++  G   H   +  GL   + VSN LI +Y K G   ++ R+F +M  RD 
Sbjct: 378 ISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDE 437

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSW +++A Y Q        G F  M   G++PD +T + + S  ++             
Sbjct: 438 VSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFES 497

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLAS 429
           +++    M  V     ++D+  + G +  A      +P   DV+ W TL++    +G   
Sbjct: 498 MIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME 557

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPA----YSHVGALRQGIK 469
                   +      NP     +S L A    +  V  LR+G++
Sbjct: 558 IGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMR 601


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/710 (36%), Positives = 407/710 (57%), Gaps = 35/710 (4%)

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLF 201
           P  +    +L+ C ++   +++HC  +K G   +  +   ++   C   +G    AR+LF
Sbjct: 16  PPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLF 75

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D++P  +   WN MI GY +       + +  EM   GV  D  T   +     R   + 
Sbjct: 76  DEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALE 135

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +H +++KHGL++N+FV   L+ MY   G +  A  VFD   + DV++WN II+AY 
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 195

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +      +   F  M+   + P  +TLV + S  ++L D R  + VH ++ +      ++
Sbjct: 196 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV-KNCKVESNL 254

Query: 382 IIGNAVVDMYAKLGIINSACAVF-------------------------------EGLPVK 410
           ++ NA++DMYA  G ++SA  +F                               + +P K
Sbjct: 255 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 314

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D +SW  +I GY ++    EA+E+F+ M+  N + P++ T VS+L A +H+GAL  G  I
Sbjct: 315 DYVSWTAMIDGYIRSNRFKEALELFRNMQATN-VKPDEFTMVSVLTACAHLGALELGEWI 373

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              + +N +  D+FV   L+DMY KCG +D A S+F ++ +     W A+I    ++G G
Sbjct: 374 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 433

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           +KAL+ F  ML   + PD IT++ +L+AC+H+GLV +G++YF  M  + GI+P++ HYGC
Sbjct: 434 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 493

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           +VDL  RAG L  A+  I+NMP++ ++ +WGALL  CR++   ++  +   ++ E++ +N
Sbjct: 494 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDN 553

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YVL+ NIYA   +W  + E+R +  D+G+KKTPG S IE+N +V  F  G+R+HP+ 
Sbjct: 554 GAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQT 613

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           + I  +L  +T  +K  GY PD S V  D+ E++KE+ +  HSE+LAIAFG+I+SPP   
Sbjct: 614 KNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVT 673

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+I KNLR+C DCHN  K +S++  RE+IVRD  RFHHFK G+CSC DYW
Sbjct: 674 IRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 284/588 (48%), Gaps = 55/588 (9%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNV 110
           L ++C  +  ++++H   +  G         +++ F      GD  ++R  FD I   N+
Sbjct: 24  LLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNL 83

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHC 167
           + WN+MI  Y R       V  + +  L  G++PD YTFP + K       L  G+++H 
Sbjct: 84  FIWNTMIRGYSRLDFPQLGVSLYLEM-LRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHG 142

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            VLK G +++VFV  +L+ MY   G  + AR +FD  P  D  +WN +IS Y + G   E
Sbjct: 143 HVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEE 202

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           +  +   M  + V    +T+  +L  C++  ++ +G  +H Y+    +E NL + N +I+
Sbjct: 203 SRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMID 262

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIA----------------------------- 318
           MYA  G M  AL +F  M  RD++SW +I++                             
Sbjct: 263 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 322

Query: 319 --AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
              Y +SN    A   F  MQ   ++PD  T+VS+ +  A L        +  +I  R  
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI-DRNK 381

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              D+ + NA++DMY K G ++ A ++F  +  +D  +W  +I G A NG   +A+++F 
Sbjct: 382 IKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFS 441

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGK 495
            M + + I P++ TY+ +L A +H G + +G K   R+  ++ +  ++    CLVD+  +
Sbjct: 442 NMLKAS-ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLAR 500

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD----HI 550
            GR+ +A  +   +P +++S+ W A+++   ++ + D A    +Q+L+  + PD    ++
Sbjct: 501 AGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYV 558

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC-MVDLFGR 597
              ++  AC     + E       M  + GIK   K  GC ++++ GR
Sbjct: 559 LLCNIYAACKRWNDLRE----LRQMMMDKGIK---KTPGCSLIEMNGR 599


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/748 (35%), Positives = 423/748 (56%), Gaps = 7/748 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K V S+  ++  Y   G+LS +R  FD +  R+V TW  +I  Y +  R  EA + F   
Sbjct: 71  KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130

Query: 137 TLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G+ PD  T   +L       ++ +  ++H  V+K+G++  + V  SLL  YC+   
Sbjct: 131 C-RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
             +A  LF  M  +D+ ++NA+++GY + G   +A+++  +M+  G      T A++L  
Sbjct: 190 LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
             + D+I  G  +H ++VK    +N+FV+N L++ Y+K   +  A ++F +M E D +S+
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N +I     +     +   F  +Q            +L SI A   +    R +H   + 
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
                E V++GN++VDMYAK      A  +F  L  +  + W  LI+GY Q GL  + ++
Sbjct: 370 TDAISE-VLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLK 428

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  M    +I  +  TY SIL A +++ +L  G ++H+R+I++    +VF  + LVDMY
Sbjct: 429 LFVEMHRA-KIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMY 487

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I +A+ +F ++P  +SV WNA+IS +  +G G  AL  F QM+  G++P+ ++F+
Sbjct: 488 AKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFL 547

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L ACSH GLV EG +YF+ M + + ++P  +HY  MVD+  R+G    A   +  MP 
Sbjct: 548 SILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPF 607

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDE 672
            PD  +W ++L +CRIH N EL   A+D+LF +    +   YV MSNIYA  G+W+ V +
Sbjct: 608 EPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGK 667

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V+   R+RG++K P +S +E+  K  +F   + +HP+ ++I  +L  L  +M+  GY PD
Sbjct: 668 VKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPD 727

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            +  L +V+E+ K   L  HSER+AIAF +IS+P  SPI + KNLR C DCH   K IS+
Sbjct: 728 STCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISK 787

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  REI VRDS+RFHHF DG CSC DYW
Sbjct: 788 IVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 257/510 (50%), Gaps = 14/510 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     ++ V ++H  +V  G   T+     L++ Y     L  + H F H++ ++  T+
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTF 208

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           N++++ Y + G   +A++ F++     G RP  +TF  VL A   + D   G+++H  V+
Sbjct: 209 NALLTGYSKEGFNHDAINLFFKMQ-DLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K  F W+VFVA +LL  Y +      ARKLF +MP  D  S+N +I+    +G   E+L+
Sbjct: 268 KCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +  E++           A++L + A S N+  G  IH   +       + V N+L++MYA
Sbjct: 328 LFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYA 387

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K      A R+F  +  +  V W ++I+ Y Q          F  M +A I  D  T  S
Sbjct: 388 KCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYAS 447

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +    A L      + +H  I+R G  + +V  G+A+VDMYAK G I  A  +F+ +PV+
Sbjct: 448 ILRACANLASLTLGKQLHSRIIRSGC-LSNVFSGSALVDMYAKCGSIKEALQMFQEMPVR 506

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           + +SWN LI+ YAQNG    A+  F+ M     + PN  +++SIL A SH G + +G++ 
Sbjct: 507 NSVSWNALISAYAQNGDGGHALRSFEQMIHSG-LQPNSVSFLSILCACSHCGLVEEGLQY 565

Query: 471 H---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGI 526
                +V K     + + +  +VDM  + GR D+A  L  ++P     + W++I++   I
Sbjct: 566 FNSMTQVYKLEPRREHYAS--MVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRI 623

Query: 527 HGQGDKALNFFRQMLD-EGVRPDHITFVSL 555
           H   + A+    Q+ + +G+R D   +VS+
Sbjct: 624 HKNQELAIKAADQLFNMKGLR-DAAPYVSM 652



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 241/501 (48%), Gaps = 35/501 (6%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           + +  S++K GF+ +       +  + + G    ARKLFD+MP ++  S N MI GY +S
Sbjct: 27  QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86

Query: 223 GNA-------------------------------VEALDILDEMRLEGVSMDPITVASIL 251
           GN                                +EA ++  +M   G+  D IT+A++L
Sbjct: 87  GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
                 +++     +H ++VK G +  L V N+L++ Y K   +  A  +F  M E+D V
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           ++N+++  Y +      A   F  MQ  G +P   T  ++ +   Q++D    + VH F+
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++   F+ +V + NA++D Y+K   I  A  +F  +P  D IS+N LIT  A NG   E+
Sbjct: 267 VKCN-FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEES 325

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           +E+F+ + +    +  Q  + ++L   ++   L  G +IH++ I      +V V   LVD
Sbjct: 326 LELFREL-QFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVD 384

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KC +  +A  +F  +   SSVPW A+IS +   G  +  L  F +M    +  D  T
Sbjct: 385 MYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSAT 444

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           + S+L AC++   ++ G++  H      G   ++     +VD++ + G +  A    Q M
Sbjct: 445 YASILRACANLASLTLGKQ-LHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEM 503

Query: 612 PVRPDASIWGALLGACRIHGN 632
           PVR   S W AL+ A   +G+
Sbjct: 504 PVRNSVS-WNALISAYAQNGD 523



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 28/206 (13%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  + ++C  L  +   K+LH+ ++ SG +  VFS + LV+ YA  G +  +   F  + 
Sbjct: 445 YASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMP 504

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RN  +WN++IS Y + G    A+  F Q  + SGL+P+  +F  +L AC         H
Sbjct: 505 VRNSVSWNALISAYAQNGDGGHALRSFEQM-IHSGLQPNSVSFLSILCACS--------H 555

Query: 167 CSVLKLGFEW-----DVFVA-------ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWN 213
           C +++ G ++      V+         AS++ M CR G  + A KL   MP   D   W+
Sbjct: 556 CGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWS 615

Query: 214 AMISGYCQSGN---AVEALDILDEMR 236
           ++++      N   A++A D L  M+
Sbjct: 616 SILNSCRIHKNQELAIKAADQLFNMK 641


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/678 (38%), Positives = 412/678 (60%), Gaps = 8/678 (1%)

Query: 148 TFPPVLKACRNLVDGKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
           T    L   ++L    ++H  V   G    + ++A  L   Y   G    A+ +FD + +
Sbjct: 27  TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS--GL 264
           ++S  WN+MI GY  + +   AL +  +M   G   D  T   +L  C   D +L   G 
Sbjct: 87  KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACG--DLLLREMGR 144

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H  +V  GLE +++V N++++MY KFG +  A  VFD+M+ RD+ SWN++++ + ++ 
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME--DVI 382
           +   A   F  M++ G   D  TL++L S    + D +  + +HG+++R G      +  
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + N+++DMY     ++ A  +FEGL VKDV+SWN+LI+GY + G A +A+E+F  M    
Sbjct: 265 LMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVG 324

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + P++ T +S+L A + + ALR G  + + V+K     +V V T L+ MY  CG +  A
Sbjct: 325 AV-PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCA 383

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F ++P  +      +++  GIHG+G +A++ F +ML +GV PD   F ++L+ACSHS
Sbjct: 384 CRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHS 443

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV EG+  F+ M  ++ ++P   HY C+VDL GRAG+L  A+  I+NM ++P+  +W A
Sbjct: 444 GLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTA 503

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LL ACR+H N++L  +++ +LFE++ + V  YV +SNIYA   +WE V+ VR+L   R L
Sbjct: 504 LLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRL 563

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           +K P +S +E+N  V  F+ G+ +H + + IY +L++L  ++K  GY PD S VL DVEE
Sbjct: 564 RKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEE 623

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
           + KE +L  HSERLA+AF +I++ P + I+I KNLRVCGDCH   K IS++T REII+RD
Sbjct: 624 EIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRD 683

Query: 803 SNRFHHFKDGICSCGDYW 820
             RFHHF+DG+CSCG YW
Sbjct: 684 ICRFHHFRDGLCSCGGYW 701



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/492 (32%), Positives = 269/492 (54%), Gaps = 25/492 (5%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L QS T    L    +LHA +   G ++   + +TKL   YA  G + +++H FD I  +
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKI 165
           N + WNSMI  Y  C          Y   L  G +PD +T+P VLKAC +L+    G+K+
Sbjct: 88  NSFLWNSMIRGYA-CNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  V+  G E DV+V  S+L MY +FG    AR +FD M VRD  SWN M+SG+ ++G A
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE---FNLFVS 282
             A ++  +MR +G   D  T+ ++L  C    ++  G  IH Y+V++G      N F+ 
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLM 266

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N++I+MY     +  A ++F+ +  +DVVSWNS+I+ YE+  D   A   F  M   G  
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV 326

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD +T++S+ +   Q++  R   +V  ++++RG+ + +V++G A++ MYA  G +  AC 
Sbjct: 327 PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV-NVVVGTALIGMYANCGSLVCACR 385

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF+ +P K++ +   ++TG+  +G   EAI +F  M     + P++G + ++L A SH G
Sbjct: 386 VFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLG-KGVTPDEGIFTAVLSACSHSG 444

Query: 463 ALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
            + +G +I  ++ +     D  V       +CLVD+ G+ G +D+A ++   +  + +  
Sbjct: 445 LVDEGKEIFYKMTR-----DYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNED 499

Query: 516 PWNAIISCHGIH 527
            W A++S   +H
Sbjct: 500 VWTALLSACRLH 511


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 273/780 (35%), Positives = 441/780 (56%), Gaps = 16/780 (2%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-- 107
           L ++C +   L   K LH  L+ SG          L+  Y+  GD   +   F ++ +  
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG--LRPDFYTFPPVLKACRN---LVDG 162
           R++ +W+++IS +      S A+  F      S   + P+ Y F  +L++C N      G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 163 KKIHCSVLKLG-FEWDVFVAASLLHMYCRFGL-ANVARKLFDDMPVRDSGSWNAMISGYC 220
             I   +LK G F+  V V  +L+ M+ + GL    AR +FD M  ++  +W  MI+ Y 
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G   +A+D+   + +   + D  T+ S+L  C   +    G  +H ++++ GL  ++F
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V   L++MYAK   + ++ ++F+ M+  +V+SW ++I+ Y QS     A   F  M    
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           + P+  T  S+    A L D    + +HG  ++ G    + + GN++++MYA+ G +  A
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCV-GNSLINMYARSGTMECA 403

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
              F  L  K++IS+NT       N  A ++ E F    E   +  +  TY  +L   + 
Sbjct: 404 RKAFNILFEKNLISYNTAADA---NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAAC 460

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +G + +G +IHA ++K+    ++ +   L+ MY KCG  + A+ +F  +   + + W +I
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSI 520

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS    HG   KAL  F +ML+ GV+P+ +T++++L+ACSH GL+ E  ++F+ M     
Sbjct: 521 ISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHS 580

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I P ++HY CMVDL GR+G L  A  FI +MP   DA +W   LG+CR+H N +LG  A+
Sbjct: 581 ISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAA 640

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
            ++ E +  +   Y+L+SN+YA+ G+W+ V  +R   + + L K  G+S IEV+N+V  F
Sbjct: 641 KKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKF 700

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
           + G+ +HP+  KIYDEL  L  K+K+LGY+P+  FVL DVE+++KE  L  HSE++A+A+
Sbjct: 701 HVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAY 760

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +IS+P   PI++FKNLRVCGDCH   K+IS +T REI+VRD+NRFHH KDG CSC DYW
Sbjct: 761 ALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 180/338 (53%), Gaps = 20/338 (5%)

Query: 236 RLEGVSMDPITVASIL-PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           RL+  +  P+  +S+L   C RS N+  G L+H  ++  GL  +  + N+LI +Y+K G 
Sbjct: 30  RLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGD 89

Query: 295 MRHALRVFDQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG---IQPDLLTLV 349
             +AL +F  M   +RD+VSW++II+ +  ++    A   F  M Q     I P+     
Sbjct: 90  WENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFT 149

Query: 350 SLTSIVAQLNDCRN------SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI-INSACA 402
           +L      L  C N        ++  F+++ G+F   V +G A++DM+ K G+ I SA  
Sbjct: 150 AL------LRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARM 203

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF+ +  K++++W  +IT Y+Q GL  +A+++F  +   +E  P++ T  S+L A   + 
Sbjct: 204 VFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRL-LVSEYTPDKFTLTSLLSACVELE 262

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
               G ++H+ VI++ L  DVFV   LVDMY K   ++++  +F  +   + + W A+IS
Sbjct: 263 FFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALIS 322

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            +    Q  +A+  F  ML   V P+  TF S+L AC+
Sbjct: 323 GYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACA 360


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 285/841 (33%), Positives = 445/841 (52%), Gaps = 98/841 (11%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL +SC+ +     +HA L+ +  I     +++++ F  ++ +L  +     +       
Sbjct: 40  DLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESI 99

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
            WN+++   ++ G   E ++C+Y   +T G+  D  TF  ++ AC    D   G ++H  
Sbjct: 100 IWNTLLENKLKEGCPQEVLECYYHM-VTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           +LK GF  +  +  +L+ +Y + G      +LF+ M  RD  SWN MIS Y   G   EA
Sbjct: 159 ILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREA 218

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           LD+ DEM + GV  D IT+ S++  CA+  ++  G  +HLYIV + L     + N L++M
Sbjct: 219 LDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDM 278

Query: 289 YAKFGMMRHA---------------------------------LRVFDQMMERDVVSWNS 315
           Y+K G M  A                                  ++FD+M ER +VSW +
Sbjct: 279 YSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTT 338

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +++ Y Q      +   F  M+   + PD + LV++ S    L D    RSVH FI+  G
Sbjct: 339 MMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYG 398

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK------------------------- 410
             + D  +GNA++D+YAK G ++ A   FE LP K                         
Sbjct: 399 MLV-DGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFF 457

Query: 411 ------DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
                 D++SWNT++  Y ++ L +E+ E+F  M+  N + P++ T +S+L + + VGAL
Sbjct: 458 NKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSN-VKPDKTTLISLLSSCAKVGAL 516

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             GI ++  + KN +  D  + T L+DMYGKCG ++ A  +F Q+   +   W A+++ +
Sbjct: 517 NHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAY 576

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
            + GQ  +A++ + +M + GV+PDH+TF++LL ACSH GLV EG +YF+ ++  + I P 
Sbjct: 577 AMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPT 636

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           + HYGCMVDL GR GHL     FI+ MP+ PD SIW +L+ ACR H N+EL   A  +L 
Sbjct: 637 IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLI 696

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           E+D  N G +VL+SNIYA+ G+W+ V +VR+   + G+ K PG++ IE N  V  F   N
Sbjct: 697 EIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE-----EDEKEHILTSHSERLAIA 759
                                      D   +LQD+E     + E     + HSERLA+A
Sbjct: 757 LVS-----------------------ADILCMLQDIERRLLVKQELSDTTSQHSERLAVA 793

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG+I++   SPI++  ++R+C DCH+  K ISQ  +REI++RD+ RFH F DG CSC DY
Sbjct: 794 FGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDY 853

Query: 820 W 820
           W
Sbjct: 854 W 854



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 268/569 (47%), Gaps = 83/569 (14%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L  +C K   VK    +H  ++  G  +    +  L+  Y+  G L      F+ ++
Sbjct: 136 FHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMT 195

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
           +R+V +WN+MIS YV  G   EA+D F +  L SG+ PD  T   ++  C  L D   GK
Sbjct: 196 HRDVISWNTMISCYVLKGMYREALDLFDEM-LVSGVLPDEITMVSLVSTCAKLKDLEMGK 254

Query: 164 KIHCSVL-------------------KLG--------------FEWDVFVAASLLHMYCR 190
           ++H  ++                   K G               E DV +  +L+  Y +
Sbjct: 255 RLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVK 314

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
               + AR+LFD M  R   SW  M+SGY Q G   E+L++  +MR E V  D + + ++
Sbjct: 315 SNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTV 374

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM----- 305
           L  C   ++   G  +H +IV +G+  + F+ N L+++YAK G +  ALR F+Q+     
Sbjct: 375 LSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSA 434

Query: 306 --------------------------MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
                                      E+D+VSWN+++ AY + +    +   F  MQ +
Sbjct: 435 ASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSS 494

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            ++PD  TL+SL S  A++    +   V+ +I +    + D ++G A++DMY K G +  
Sbjct: 495 NVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGI-DAMLGTALIDMYGKCGCVEM 553

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  +F  +  K+V  W  ++  YA  G A EAI+++  MEE   + P+  T++++L A S
Sbjct: 554 AYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEE-RGVKPDHVTFIALLAACS 612

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVAT-----CLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           H G + +G K   ++      F   + T     C+VD+ G+ G +++ +    ++P    
Sbjct: 613 HGGLVDEGYKYFNKLRS----FYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPD 668

Query: 515 VP-WNAIISCHGIHGQGDKALNFFRQMLD 542
           V  W++++     H   + A   F+Q+++
Sbjct: 669 VSIWSSLMRACRSHHNVELAEQAFKQLIE 697


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 255/710 (35%), Positives = 406/710 (57%), Gaps = 35/710 (4%)

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLF 201
           P  +    +L+ C ++   +++HC  +K G   +  +   ++   C   +G    AR+LF
Sbjct: 37  PPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLF 96

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D++P  +   WN MI GY +       + +  EM   GV  D  T   +     R   + 
Sbjct: 97  DEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALE 156

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +H +++KHGL++N+FV   L+ MY   G +  A  VFD   + DV++WN II+AY 
Sbjct: 157 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYN 216

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +      +   F  M+   + P  +TLV + S  ++L D R  + VH ++ +      ++
Sbjct: 217 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV-KNCKVESNL 275

Query: 382 IIGNAVVDMYAKLGIINSACAVF-------------------------------EGLPVK 410
           ++ NA++DMYA  G ++SA  +F                               + +P K
Sbjct: 276 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D +SW  +I GY ++    EA+E+F+ M+  N + P++ T VS+L A +H+GAL  G  I
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATN-VKPDEFTMVSVLTACAHLGALELGEWI 394

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              + +N +  D+FV   L+DMY KCG +D A S+F ++ +     W A+I    ++G G
Sbjct: 395 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 454

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           +KAL+ F  ML   + PD IT++ +L+AC+H+GLV +G++YF  M  + GI+P++ HYGC
Sbjct: 455 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 514

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           +VDL  RAG L  A+  I+NMP++ ++ +WGALL  CR++   ++  +   ++ E++ +N
Sbjct: 515 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDN 574

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YVL+ NIYA   +W  + E+R +  D+G+KK PG S IE+N +V  F  G+R+HP+ 
Sbjct: 575 GAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQT 634

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           + I  +L  +T  +K  GY PD S V  D+ E++KE+ +  HSE+LAIAFG+I+SPP   
Sbjct: 635 KNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVT 694

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+I KNLR+C DCHN  K +S++  RE+IVRD  RFHHFK G+CSC DYW
Sbjct: 695 IRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 284/588 (48%), Gaps = 55/588 (9%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNV 110
           L ++C  +  ++++H   +  G         +++ F      GD  ++R  FD I   N+
Sbjct: 45  LLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNL 104

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHC 167
           + WN+MI  Y R       V  + +  L  G++PD YTFP + K       L  G+++H 
Sbjct: 105 FIWNTMIRGYSRLDFPQLGVSLYLEM-LRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHG 163

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            VLK G +++VFV  +L+ MY   G  + AR +FD  P  D  +WN +IS Y + G   E
Sbjct: 164 HVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEE 223

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           +  +   M  + V    +T+  +L  C++  ++ +G  +H Y+    +E NL + N +I+
Sbjct: 224 SRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMID 283

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIA----------------------------- 318
           MYA  G M  AL +F  M  RD++SW +I++                             
Sbjct: 284 MYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAM 343

Query: 319 --AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
              Y +SN    A   F  MQ   ++PD  T+VS+ +  A L        +  +I  R  
Sbjct: 344 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI-DRNK 402

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              D+ + NA++DMY K G ++ A ++F  +  +D  +W  +I G A NG   +A+++F 
Sbjct: 403 IKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFS 462

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGK 495
            M + + I P++ TY+ +L A +H G + +G K   R+  ++ +  ++    CLVD+  +
Sbjct: 463 NMLKAS-ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLAR 521

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD----HI 550
            GR+ +A  +   +P +++S+ W A+++   ++ + D A    +Q+L+  + PD    ++
Sbjct: 522 AGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYV 579

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC-MVDLFGR 597
              ++  AC     + E       M  + GIK   K  GC ++++ GR
Sbjct: 580 LLCNIYAACKRWNDLRE----LRQMMMDKGIK---KXPGCSLIEMNGR 620


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 286/775 (36%), Positives = 441/775 (56%), Gaps = 22/775 (2%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT---WNSMIS 118
           H  R      ++ K K  +S   +    A+L   + +R T   +S+ N  T   ++S+  
Sbjct: 15  HHSRTTVFYRITRKSKNKYSLHSIFTPIASLSLSAQTRQT-KSLSFANSSTNRQFSSLHE 73

Query: 119 VYVRC--GRLSEAVDCFYQ-----FTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +   C  G L EA+D F Q       L S  R +      +L+AC    D   G+++H  
Sbjct: 74  IKKLCESGNLKEALD-FLQRESDDVVLDSAQRSE--AMGVLLQACGQRKDIEVGRRLHEM 130

Query: 169 V-LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           V     F  D  +   ++ MY   G  + +R +FD +  ++   WNA++S Y ++    +
Sbjct: 131 VSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFED 190

Query: 228 ALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           A+ I  E+  +     D  T+  ++  CA   ++  G +IH    K  L  ++FV N LI
Sbjct: 191 AMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALI 250

Query: 287 NMYAKFGMMRHAL-RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
            MY K G++  A+ RVFD M  + V SWN+++  Y Q++DP  A   +  M  +G+ PD 
Sbjct: 251 AMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDW 310

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ SL    +++        +HGF +R G  + D  IG +++ +Y   G   +A  +F+
Sbjct: 311 FTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV-DPFIGISLLSLYICCGKPFAAQVLFD 369

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           G+  + ++SWN +I GY+QNGL  EAI +F+ M   + I P +   + +  A S + ALR
Sbjct: 370 GMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCVCGACSQLSALR 428

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G ++H   +K  L  D+FV++ ++DMY K G I  +  +F ++       WN II+ +G
Sbjct: 429 LGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG 488

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           IHG+G +AL  F +ML  G++PD  TF  +L ACSH+GLV +G  YF+ M     I+P L
Sbjct: 489 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 548

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HY C+VD+ GRAG +  A   I+ MP  PD+ IW +LL +CRIHGN+ LG   +++L E
Sbjct: 549 EHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLE 608

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           ++ E    YVL+SN++A  GKW+ V  VR   +D GL+K  G S IEV  KV  F  G+ 
Sbjct: 609 LEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDE 668

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
             P+ E++ +  R L  K+ S+GY PD   VL D+EE++K  IL  HSE+LAI+FG++++
Sbjct: 669 MLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNT 728

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
               P++++KNLR+CGDCHN  KFIS++  R+I+VRD+ RFHHF+DGICSCGDYW
Sbjct: 729 AKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 143/275 (52%), Gaps = 9/275 (3%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L  +C++   LH+ + +H   + +G     F    L++ Y   G    ++  FD + +R+
Sbjct: 316 LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRS 375

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           + +WN MI+ Y + G   EA++ F Q  L+ G++P       V  AC  L     GK++H
Sbjct: 376 LVSWNVMIAGYSQNGLPDEAINLFRQM-LSDGIQPYEIAIMCVCGACSQLSALRLGKELH 434

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
           C  LK     D+FV++S++ MY + G   +++++FD +  +D  SWN +I+GY   G   
Sbjct: 435 CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGK 494

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNL 285
           EAL++ ++M   G+  D  T   IL  C+ +  +  GL   +  +  H +E  L     +
Sbjct: 495 EALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCV 554

Query: 286 INMYAKFGMMRHALRVFDQMM-ERDVVSWNSIIAA 319
           ++M  + G +  ALR+ ++M  + D   W+S++++
Sbjct: 555 VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/735 (36%), Positives = 417/735 (56%), Gaps = 68/735 (9%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--- 205
           +  +LK CR   D KKIHC ++K     ++F+  +L+  Y +F     AR++FD MP   
Sbjct: 18  YCELLKHCR---DTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRN 74

Query: 206 ----------------------------VRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
                                        RD  SWN++IS Y   G  ++++   + M  
Sbjct: 75  LYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLY 134

Query: 238 EG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            G  +++ I ++++L + ++   +  GL +H ++VK G +  +FV + L++MY+K G++ 
Sbjct: 135 NGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVF 194

Query: 297 HALRVFDQMMERDVV-------------------------------SWNSIIAAYEQSND 325
            A + FD+M E++VV                               SW ++IA + Q+  
Sbjct: 195 CARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGL 254

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  M+   ++ D  T  S+ +    +   +  + VH +I+R   + +++ +G+
Sbjct: 255 DREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YQDNIFVGS 313

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+VDMY K   I SA  VF  +  K+V+SW  ++ GY QNG + EA+++F  M+  N I 
Sbjct: 314 ALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQN-NGIE 372

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P+  T  S++ + +++ +L +G + H R + + L   + V+  LV +YGKCG I+D+  L
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++     V W A++S +   G+ ++ L  F  ML  G +PD +TF+ +L+ACS +GLV
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            +G + F  M +E  I P   HY CM+DLF RAG L  A  FI  MP  PDA  W +LL 
Sbjct: 493 QKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           +CR H NME+G  A++ L +++  N   Y+L+S+IYA  GKWE V  +R   RD+GL+K 
Sbjct: 553 SCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKE 612

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PG S I+  N+V IF   ++++P  ++IY EL  L  KM   GYVPD + VL DV++ EK
Sbjct: 613 PGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEK 672

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
             +L  HSE+LAIAFG+I  PP  PI++ KNLRVCGDCHN TK+IS+IT+REI+VRD+ R
Sbjct: 673 IKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAAR 732

Query: 806 FHHFKDGICSCGDYW 820
           FH FKDG CSCGD+W
Sbjct: 733 FHLFKDGRCSCGDFW 747



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 254/543 (46%), Gaps = 76/543 (13%)

Query: 57  CTKLHH---VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           C  L H    K++H  ++ + +   +F    LV+ YA    ++++R  FD +  RN+Y+W
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 114 N-------------------------------SMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           N                               S+IS Y   G L ++V  +         
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 143 RPDFYTFPPVL-----KACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
             +      +L     + C +L  G ++H  V+K GF+  VFV + L+ MY + GL   A
Sbjct: 139 NLNRIALSTMLILASKQGCVHL--GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCA 196

Query: 198 RKLFDDMP-------------------------------VRDSGSWNAMISGYCQSGNAV 226
           R+ FD+MP                                +DS SW AMI+G+ Q+G   
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA+D+  EMRLE + MD  T  S+L  C     +  G  +H YI++   + N+FV + L+
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MY K   ++ A  VF +M  ++VVSW +++  Y Q+     A   F  MQ  GI+PD  
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           TL S+ S  A L         H   +  G  +  + + NA+V +Y K G I  +  +F  
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSG-LISFITVSNALVTLYGKCGSIEDSHRLFSE 435

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +   D +SW  L++GYAQ G A+E + +F+ M   +   P++ T++ +L A S  G +++
Sbjct: 436 MSYVDEVSWTALVSGYAQFGKANETLRLFESM-LAHGFKPDKVTFIGVLSACSRAGLVQK 494

Query: 467 GIKIHARVIKNCLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCH 524
           G +I   +IK      +    TC++D++ + GR+++A     ++P S  ++ W +++S  
Sbjct: 495 GNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSC 554

Query: 525 GIH 527
             H
Sbjct: 555 RFH 557



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 187/401 (46%), Gaps = 38/401 (9%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           Q C  +H   ++H  +V  G    VF  + LV+ Y+  G +  +R  FD +  +NV  +N
Sbjct: 155 QGC--VHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYN 212

Query: 115 SMISVYVRCGRLS-------------------------------EAVDCFYQFTLTSGLR 143
           ++I+  +RC R+                                EA+D F +  L + L 
Sbjct: 213 TLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLEN-LE 271

Query: 144 PDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
            D YTF  VL AC     L +GK++H  +++  ++ ++FV ++L+ MYC+      A  +
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  M  ++  SW AM+ GY Q+G + EA+ I  +M+  G+  D  T+ S++  CA   ++
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G   H   +  GL   + VSN L+ +Y K G +  + R+F +M   D VSW ++++ Y
Sbjct: 392 EEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGY 451

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q          F +M   G +PD +T + + S  ++    +    +   +++    +  
Sbjct: 452 AQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPI 511

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLIT 420
                 ++D++++ G +  A      +P   D I W +L++
Sbjct: 512 EDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 16/291 (5%)

Query: 41  LEN-ESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           LEN E  +  F  +  +C     L   K++HA ++ +     +F  + LV+ Y     + 
Sbjct: 267 LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIK 326

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +   F  ++ +NV +W +M+  Y + G   EAV  F      +G+ PD +T   V+ +C
Sbjct: 327 SAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQ-NNGIEPDDFTLGSVISSC 385

Query: 157 RNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
            NL    +G + HC  L  G    + V+ +L+ +Y + G    + +LF +M   D  SW 
Sbjct: 386 ANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWT 445

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           A++SGY Q G A E L + + M   G   D +T   +L  C+R+  +  G  I   ++K 
Sbjct: 446 ALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK- 504

Query: 274 GLEFNLFVSNN----LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             E  +    +    +I+++++ G +  A +  ++M    D + W S++++
Sbjct: 505 --EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSS 553


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/739 (37%), Positives = 417/739 (56%), Gaps = 59/739 (7%)

Query: 138 LTSGLRPDFYTFPP----------------VLKACRNLVDGKKIHCSVLKLGFEWDVFVA 181
           + S L P F  F P                +L  C ++   K+IH  ++K G    +F  
Sbjct: 1   MVSCLSPPFVHFLPSSDPPYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQ 60

Query: 182 ASLLHMYCRFGLA---NVARKLFDDMPVRDSGS--WNAMISGYCQSGNAVEALDILDEMR 236
           + L+  +C    +   + A  LF  +  +      WN +I  +  +     +L +  +M 
Sbjct: 61  SKLIE-FCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQML 119

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G+  +  T  S+   CA+S        +H + +K  L  +  V  +LI+MY++ G +R
Sbjct: 120 HSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELR 179

Query: 297 HAL-------------------------------RVFDQMMERDVVSWNSIIAAYEQSND 325
           HA                                R+FD++  +DVVSWN++IA Y QS  
Sbjct: 180 HARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGR 239

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   FT MQ+A + P+  T+VS+ S    L      + +  ++  RG F +++ + N
Sbjct: 240 FEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRG-FGKNLQLVN 298

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+VDMY+K G I +A  +F+G+  KDVI WNT+I GY    L  EA+ +F++M   N + 
Sbjct: 299 ALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLREN-VT 357

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL----CFDVFVATCLVDMYGKCGRIDD 501
           PN  T++++LPA + +GAL  G  +HA + KN        +V + T ++ MY KCG ++ 
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F  +   S   WNA+IS   ++G  ++AL  F +M++EG +PD ITFV +L+AC+ 
Sbjct: 418 AEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQ 477

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +G V  G RYF  M +++GI P L+HYGCM+DL  R+G    A   + NM + PD +IWG
Sbjct: 478 AGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWG 537

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           +LL ACRIHG +E G   ++RLFE++ EN G YVL+SNIYA  G+W+ V ++R+   D+G
Sbjct: 538 SLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKG 597

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +KK PG +SIE++  V  F  G++ HP+ E I+  L  +   ++  G+VPD S VL D++
Sbjct: 598 MKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMD 657

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E+ KE  LT HSE+LAIAFG+IS+ P S I+I KNLRVC +CH+ TK IS+I  REII R
Sbjct: 658 EEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIAR 717

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D NRFHHFKDG CSC D W
Sbjct: 718 DRNRFHHFKDGFCSCNDRW 736



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 256/522 (49%), Gaps = 47/522 (9%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYR- 108
           +L   C  +  +K++H+L++ SG   T+F+ +KL+ F A     DLS++   F  I ++ 
Sbjct: 30  NLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQP 89

Query: 109 -NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKK 164
            N++ WN++I  +      + ++  F Q  L SGL P+ +TFP + K+C   +   + K+
Sbjct: 90  PNIFIWNTLIRAHSLTPTPTSSLHLFSQM-LHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGL------------------------------- 193
           +H   LKL       V  SL+HMY + G                                
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            + AR+LFD++P +D  SWNAMI+GY QSG   EAL     M+   VS +  T+ S+L  
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C    ++  G  I  ++   G   NL + N L++MY+K G +  A ++FD M ++DV+ W
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW 328

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-- 371
           N++I  Y   +    A   F  M +  + P+ +T +++    A L      + VH +I  
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDK 388

Query: 372 -MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
            ++    + +V +  +++ MYAK G +  A  VF  +  + + SWN +I+G A NG A  
Sbjct: 389 NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAER 448

Query: 431 AIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATC 488
           A+ +F+ M   NE   P+  T+V +L A +  G +  G +  + + K+  +   +    C
Sbjct: 449 ALGLFEEM--INEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGC 506

Query: 489 LVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
           ++D+  + G+ D+A  L   +        W ++++   IHGQ
Sbjct: 507 MIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQ 548



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 206/469 (43%), Gaps = 49/469 (10%)

Query: 50  FDDLFQSCTK---LHHVKRLHA-------------------------------LLVVSGK 75
           F  LF+SC K    H  K+LHA                               L+     
Sbjct: 130 FPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKST 189

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++   S T L+  Y + G +  +R  FD I  ++V +WN+MI+ YV+ GR  EA+ CF +
Sbjct: 190 LRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTR 249

Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
               + + P+  T   VL AC   R+L  GK I   V   GF  ++ +  +L+ MY + G
Sbjct: 250 MQ-EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG 308

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               ARKLFD M  +D   WN MI GYC      EAL + + M  E V+ + +T  ++LP
Sbjct: 309 EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLP 368

Query: 253 VCARSDNILSGLLIHLYIVKH----GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
            CA    +  G  +H YI K+    G   N+ +  ++I MYAK G +  A +VF  M  R
Sbjct: 369 ACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR 428

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
            + SWN++I+    +     A G F  M   G QPD +T V + S   Q           
Sbjct: 429 SLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYF 488

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGL 427
             + +       +     ++D+ A+ G  + A  +   + ++ D   W +L+     +G 
Sbjct: 489 SSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG- 547

Query: 428 ASEAIEVFQ-MMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARV 474
               +E  + + E   E+ P N G YV +   Y+  G      KI  ++
Sbjct: 548 ---QVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKL 593


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/757 (36%), Positives = 441/757 (58%), Gaps = 43/757 (5%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
           IS+++ + WNS+I+      +  +    F+       +  + +TFP +LKAC   R L+ 
Sbjct: 13  ISHKDTFHWNSLIAKNAT--QNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR--DSGSWNAMISGY 219
             ++H  + +LG   D F AA+L+  Y + G A  A ++FD+MP    D  SW A+IS Y
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 220 CQSGNAVEALDILDEMRL-------EGVSMDPITVASILPVCA---RSDNILSGLLIHLY 269
             +G   EA      MR        E   +D +++ +++  CA    S+ +  G  +H  
Sbjct: 131 SSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSIIAAYEQSNDPI 327
           +VK+G   +  + N++++MY+    +  A RVF+   + +RDVVSWNS+I+ +  + +  
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAE 250

Query: 328 TAHGFFTTMQQAG---IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM---EDV 381
            A   F  M   G   ++P+ +T+++L    A+L     S  VH +I  R   +   +DV
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEE 440
           ++  A++DM+A+ G +  A  +F+G+  K+V+ W+ +I GY Q     EA+ +F QM+ E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 441 CN----EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            N    E+ PN  T VS++ A S +GA R    IH   +   L  D  +A+ L+DM  KC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 497 GRIDDAMSLFYQVPRSSS--VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           G I+    +F ++  S+   V W+++I   GIHG+G +AL  F +M   G  P+ IT++S
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +L+ACSH+GLV +G+  F+ M++++G+ P  KHY C+VDL GRAGHL  AHN I NMP++
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
            D ++WG+LL AC +HGN +LG +   ++  +DS +VG++VL++N+Y + G+W+ V  +R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDK 733
              R  GL+K PG S IE+ N+V  F   +R+HP+ E IY EL  L  ++ K+  YV + 
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTET 670

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGII----------SSPPKSPIQIFKNLRVCGDC 783
              ++D +          HSERLAIAFG+I          S    +PI+I KNLRVC DC
Sbjct: 671 GLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDC 730

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H +TK +S++ +RE+IVRD++RFHHF+DG CSCGDYW
Sbjct: 731 HAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 254/526 (48%), Gaps = 48/526 (9%)

Query: 45  SREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101
           S    F  L ++C  L  +    ++HA L   G     FS+  LV+ Y   G   ++   
Sbjct: 50  SNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQV 109

Query: 102 FDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP------DFYTFPPVL 153
           FD +     +V +W ++IS Y   G + EA   F +     G         D  +   ++
Sbjct: 110 FDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALV 169

Query: 154 KAC------RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV- 206
            AC        L  G  +H  V+K GF     +  S++HMY        A ++F+ +P+ 
Sbjct: 170 SACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE 229

Query: 207 -RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDP--ITVASILPVCARSDNILS 262
            RD  SWN++ISG+  +G A  AL   ++M  EG S ++P  +TV ++L  CA    + +
Sbjct: 230 QRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVET 289

Query: 263 GLLIHLYI-VKHG---LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
              +H YI  +H    +  ++ V   L++M+A+ G +  A  +FD +  ++VV W+++IA
Sbjct: 290 SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIA 349

Query: 319 AYEQSNDPITAHGFFTTMQQAG------IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
            YEQ + P  A   F  M   G      ++P+ +TLVS+ +  ++L   R++  +H + +
Sbjct: 350 GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAV 409

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL--PVKDVISWNTLITGYAQNGLASE 430
             G   +D  I +A++DM AK G I     VF  +    + V+SW+++I     +G    
Sbjct: 410 ATG-LDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKR 468

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA---- 486
           A+E+F  M       PN+ TY+S+L A SH G + QG     +   N +  D  ++    
Sbjct: 469 ALELFSEMRT-GGYEPNEITYISVLSACSHAGLVEQG-----KSCFNSMEKDYGMSPTGK 522

Query: 487 --TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
              CLVD+ G+ G +D+A ++   +P  + +  W ++++   +HG 
Sbjct: 523 HYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGN 568


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/757 (36%), Positives = 441/757 (58%), Gaps = 43/757 (5%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
           IS+++ + WNS+I+      +  +    F+       +  + +TFP +LKAC   R L+ 
Sbjct: 13  ISHKDTFHWNSLIAKNAT--QNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGY 219
             ++H  + +LG   D F AA+L+  Y + G A  A ++FD+MP    D  SW A+IS Y
Sbjct: 71  TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130

Query: 220 CQSGNAVEALDILDEMRL-------EGVSMDPITVASILPVCA---RSDNILSGLLIHLY 269
             +G   EA      MR        E   +D +++ +++  CA    S+ +  G  +H  
Sbjct: 131 SSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGL 190

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSIIAAYEQSNDPI 327
           +VK+G   +  + N++++MY+    +  A RVF+   + +RDVVSWNS+I+ +  + +  
Sbjct: 191 VVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAE 250

Query: 328 TAHGFFTTMQQAG---IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM---EDV 381
            A   F  M   G   ++P+ +T+++L    A+L     S  VH +I  R   +   +DV
Sbjct: 251 RALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDV 310

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEE 440
           ++  A++DM+A+ G +  A  +F+G+  K+V+ W+ +I GY Q     EA+ +F QM+ E
Sbjct: 311 VVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 441 CN----EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            N    E+ PN  T VS++ A S +GA R    IH   +   L  D  +A+ L+DM  KC
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 497 GRIDDAMSLFYQVPRSSS--VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           G I+    +F ++  S+   V W+++I   GIHG+G +AL  F +M   G  P+ IT++S
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +L+ACSH+GLV +G+  F+ M++++G+ P  KHY C+VDL GRAGHL  AHN I NMP++
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
            D ++WG+LL AC +HGN +LG +   ++  +DS +VG++VL++N+Y + G+W+ V  +R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDK 733
              R  GL+K PG S IE+ N+V  F   +R+HP+ E IY EL  L  ++ K+  YV + 
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTET 670

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGII----------SSPPKSPIQIFKNLRVCGDC 783
              ++D +          HSERLAIAFG+I          S    +PI+I KNLRVC DC
Sbjct: 671 GLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDC 730

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H +TK +S++ +RE+IVRD++RFHHF+DG CSCGDYW
Sbjct: 731 HAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 254/526 (48%), Gaps = 48/526 (9%)

Query: 45  SREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101
           S    F  L ++C  L  +    ++HA L   G     FS+  LV+ Y   G   ++   
Sbjct: 50  SNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQV 109

Query: 102 FDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP------DFYTFPPVL 153
           FD +     +V +W ++IS Y   G + EA   F +     G         D  +   ++
Sbjct: 110 FDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALV 169

Query: 154 KAC------RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV- 206
            AC        L  G  +H  V+K GF     +  S++HMY        A ++F+ +P+ 
Sbjct: 170 SACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIE 229

Query: 207 -RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDP--ITVASILPVCARSDNILS 262
            RD  SWN++ISG+  +G A  AL   ++M  EG S ++P  +TV ++L  CA    + +
Sbjct: 230 QRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVET 289

Query: 263 GLLIHLYI-VKHG---LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
              +H YI  +H    +  ++ V   L++M+A+ G +  A  +FD +  ++VV W+++IA
Sbjct: 290 SSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIA 349

Query: 319 AYEQSNDPITAHGFFTTMQQAG------IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
            YEQ + P  A   F  M   G      ++P+ +TLVS+ +  ++L   R++  +H + +
Sbjct: 350 GYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAV 409

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL--PVKDVISWNTLITGYAQNGLASE 430
             G   +D  I +A++DM AK G I     VF  +    + V+SW+++I     +G    
Sbjct: 410 ATG-LDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKR 468

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA---- 486
           A+E+F  M       PN+ TY+S+L A SH G + QG     +   N +  D  ++    
Sbjct: 469 ALELFSEMRT-GGYEPNEITYISVLSACSHAGLVEQG-----KSCFNSMEKDYGMSPTGK 522

Query: 487 --TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
              CLVD+ G+ G +D+A ++   +P  + +  W ++++   +HG 
Sbjct: 523 HYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGN 568


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/717 (37%), Positives = 401/717 (55%), Gaps = 73/717 (10%)

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K  F W+     ++L  Y + G    A ++FD +PVRDS SW  +I GY Q G   +A+
Sbjct: 38  VKTTFSWN-----TILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAI 92

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            I  +M  + V     T+ ++L  CA + +   G  +H ++VK GL   + V+N+L+NMY
Sbjct: 93  KIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMY 152

Query: 290 AKFGMMRHALRVFDQMM-------------------------------ERDVVSWNSIIA 318
           AK G ++ A  VFD+M                                ERD+VSWNS+IA
Sbjct: 153 AKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIA 212

Query: 319 AYEQSNDPITAHGFFTT-MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
              Q      A  FF++ ++   ++PD  +L S  S  A L      + +HG+I+R   F
Sbjct: 213 GCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRT-MF 271

Query: 378 MEDVIIGNAVVDMYA---------------------------------KLGIINSACAVF 404
                +GNA++ MYA                                 KLG I  A  +F
Sbjct: 272 DASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIF 331

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             L   DV++W  +I GY QNGL ++AIEVF+ M       PN  T  ++L A S V +L
Sbjct: 332 NSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGP-RPNSFTLAAMLSASSSVTSL 390

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISC 523
             G +IHA  I++       V   L  MY K G I+ A  +F  + ++  +V W ++I  
Sbjct: 391 NHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMA 450

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG G++A+  F QML  G++PDHIT+V +L+AC+H GLV +G+ YF +M+    I P
Sbjct: 451 LAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDP 510

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            L HY CMVDLFGRAG L  A+ F++NMP+ PD   WG+LL +C+++ N++L  VA++RL
Sbjct: 511 TLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERL 570

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
             ++  N G Y  ++N+Y++ GKW+   ++R L + RG+KK  G S +++ NK  +F   
Sbjct: 571 LLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVE 630

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +  HP+ ++IY  +  +  ++K +G+ PD   VL D+E + K+ IL  HSE+LAIAFGII
Sbjct: 631 DGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGII 690

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+P  + ++I KNLRVC DCHN  KFIS++ +REIIVRD+ RFHHFKDG CSC DYW
Sbjct: 691 STPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/567 (27%), Positives = 249/567 (43%), Gaps = 107/567 (18%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           +V  G   +V+    L+N YA  G    +   F+ +  +  ++WN+++S Y + G+L +A
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 130 VDCF------------------------------YQFTLTSGLRPDFYTFPPVLKACRNL 159
              F                              +   +   + P  +T   VL +C   
Sbjct: 61  HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 160 VD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
                GKK+H  V+KLG    V VA SLL+MY + G   +A+ +FD M +R++ SWNAMI
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180

Query: 217 S-------------------------------GYCQSGNAVEALDILDEMRLEGVSMDP- 244
           S                               G  Q G   EAL     + L+  S+ P 
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSI-LKDTSLKPD 239

Query: 245 -ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR--- 300
             ++AS L  CA  + +  G  IH YIV+   + +  V N LI+MYAK G +  A R   
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIE 299

Query: 301 ------------------------------VFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
                                         +F+ + + DVV+W ++I  Y Q+     A 
Sbjct: 300 QSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAI 359

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F TM   G +P+  TL ++ S  + +    + + +H   +R G  +    +GNA+  M
Sbjct: 360 EVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPS-VGNALTTM 418

Query: 391 YAKLGIINSACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           YAK G IN A  VF  L   +D +SW ++I   AQ+GL  EAIE+F+ M     I P+  
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG-IKPDHI 477

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFY 507
           TYV +L A +H G + QG + +  ++KN    D  ++   C+VD++G+ G + +A     
Sbjct: 478 TYVGVLSACTHGGLVEQG-RSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVE 536

Query: 508 QVPRSSSV-PWNAIISCHGIHGQGDKA 533
            +P    V  W +++S   ++   D A
Sbjct: 537 NMPMEPDVIAWGSLLSSCKVYKNVDLA 563



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 207/481 (43%), Gaps = 81/481 (16%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H+ +V  G    V  +  L+N YA  GDL  ++  FD +  RN  +WN+MIS+++ C
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNC 186

Query: 124 GRL-------------------------------SEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GR+                               +EA+  F      + L+PD ++    
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR----------- 198
           L AC NL     GK+IH  +++  F+    V  +L+ MY + G   +AR           
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306

Query: 199 -------------KLFDDMPVR---------DSGSWNAMISGYCQSGNAVEALDILDEMR 236
                        KL D  P R         D  +W AMI GY Q+G   +A+++   M 
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            EG   +  T+A++L   +   ++  G  IH   ++ G   +  V N L  MYAK G + 
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSIN 426

Query: 297 HALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
            A +VF+ + + RD VSW S+I A  Q      A   F  M   GI+PD +T V + S  
Sbjct: 427 GARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC 486

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKLGIINSACAVFEGLPVK-DV 412
                    RS   F + +     D  + +   +VD++ + G++  A    E +P++ DV
Sbjct: 487 THGGLVEQGRSY--FDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDV 544

Query: 413 ISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           I+W +L++    Y    LA  A E   ++E       N G Y ++   YS  G      K
Sbjct: 545 IAWGSLLSSCKVYKNVDLAKVAAERLLLIEP-----NNSGAYSALANVYSSCGKWDDAAK 599

Query: 470 I 470
           I
Sbjct: 600 I 600



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 7/168 (4%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-RNVYTWN 114
           S T L+H K++HA  + SG+  +      L   YA  G ++ +R  F+ +   R+  +W 
Sbjct: 386 SVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWT 445

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKL 172
           SMI    + G   EA++ F Q  LT G++PD  T+  VL AC +  LV+  + +  ++K 
Sbjct: 446 SMIMALAQHGLGEEAIELFEQM-LTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKN 504

Query: 173 GFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMIS 217
             + D  ++  A ++ ++ R GL   A K  ++MP+  D  +W +++S
Sbjct: 505 VHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/744 (37%), Positives = 425/744 (57%), Gaps = 9/744 (1%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF-YQFTLTS 140
           +  L++ +   G +  + + F  +   +  +WNSMI+ Y+R G   E++ CF + F +  
Sbjct: 169 ANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK 228

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
            +     T   +L  C    NL  G+ IH  VLK G+  +V  + +L+ MY   G    A
Sbjct: 229 EINST--TLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDA 286

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
             +F  M  +D  SWN+M++ Y Q GN ++AL +L  M       + +T  S L  C+  
Sbjct: 287 ELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDP 346

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           +    G ++H  ++  GL  N+ V N L+ +YAK G+M  A +VF  M +RD V+WN++I
Sbjct: 347 EFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALI 406

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC-RNSRSVHGFIMRRGW 376
             +  S +P  A   F  M++ G+  + +T+ ++       ND   +   +H FI+  G 
Sbjct: 407 GGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTG- 465

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F  D  + N+++ MYAK G +NS+  +F+ L  K+  +WN ++   A +G   EA++   
Sbjct: 466 FQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLL 525

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     +N ++ ++   L A + +  L +G ++H   +K     + FVA+  +DMYGKC
Sbjct: 526 EMRRAG-VNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKC 584

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G IDD + +  +    S + WN + S    HG  +KA   F +M++ GV+PDH+TFVSLL
Sbjct: 585 GEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLL 644

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +ACSH G+V EG  Y+  M +EFGI   + H  C++DL GR+G    A  FI+ MPV P 
Sbjct: 645 SACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPT 704

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
             +W +LL AC+ HGN+ELG  A + L ++D  +   YVL SNI A  GKWE V+++R  
Sbjct: 705 DHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQ 764

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
                +KK P  S +++ NK+ +F  G+ +HP+  +IY +L  L   +K  GY+PD S+ 
Sbjct: 765 MGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYA 824

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           LQD +E++KEH L +HSERLA+A+G+ISSP  S ++IFKNLRVCGDCH+  KF S I  R
Sbjct: 825 LQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGR 884

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           +I++RD  RFH F  G CSC DYW
Sbjct: 885 KIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 272/522 (52%), Gaps = 8/522 (1%)

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKL 172
           +S +VR G   E++  F+      G++P       ++ AC      L++G ++H  ++K+
Sbjct: 1   MSGFVRAGSYRESMR-FFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKV 59

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G   DVFV  SL+H+Y  +GLA  A K+F +M  ++  SW A++  Y   G     ++I 
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             MR EG+S +  T++S++  C   +N L G  +  +++K+GLE N+ V+N+LI+M+  F
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A  VF  M E D +SWNS+IAAY ++     +   F+ M +   + +  TL ++ 
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           +    +++ +  R +H  +++ GW   +V   N ++ MY+  G    A  VF+G+  KD+
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGW-NSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDM 298

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ISWN+++  YAQ+G   +A+++   M        N  T+ S L A S      +G  +HA
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMFYMRR-GANYVTFTSALAACSDPEFATEGKILHA 357

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            VI   L  +V V   LV +Y K G + +A  +F  +P+   V WNA+I  H    + D+
Sbjct: 358 LVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDE 417

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL  F+ M +EGV  ++IT  ++L AC     + E     H      G +        ++
Sbjct: 418 ALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLI 477

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            ++ + G L  ++N    +  + +AS W A++ A   HG+ME
Sbjct: 478 TMYAKCGDLNSSNNIFDRLTSK-NASAWNAMMAANAHHGHME 518



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/625 (27%), Positives = 299/625 (47%), Gaps = 54/625 (8%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  +V  G +  VF  T LV+ Y N G  + +   F  + Y+NV +W +++  YV  G
Sbjct: 51  QVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYG 110

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
             S  ++  Y+   + G+  +  T   V+  C +L +   G ++   V+K G E +V VA
Sbjct: 111 EPSMVMN-IYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVA 169

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ M+  FG    A  +F  M   D+ SWN+MI+ Y ++G   E+L     M      
Sbjct: 170 NSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKE 229

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           ++  T++++L  C   DN+  G  IH  ++K G   N+  SN LI MY+  G    A  V
Sbjct: 230 INSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELV 289

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F  M+E+D++SWNS++A Y Q  + + A     TM       + +T  S  +  +     
Sbjct: 290 FQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFA 349

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              + +H  ++  G   E+VI+GNA+V +YAK G++  A  VF+ +P +D ++WN LI G
Sbjct: 350 TEGKILHALVIHVG-LHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG 408

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-------LRQGIKIHARV 474
           +A +    EA++ F++M E       +G  ++ +   + +GA       L  G+ IHA +
Sbjct: 409 HADSEEPDEALKAFKLMRE-------EGVPINYITISNVLGACLAPNDLLEHGMPIHAFI 461

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           I      D +V   L+ MY KCG ++ + ++F ++   ++  WNA+++ +  HG  ++AL
Sbjct: 462 ILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEAL 521

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
            F  +M   GV  D  +F   L A +   ++ EGQ+  H +  + G   +       +D+
Sbjct: 522 KFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQ-LHGLAVKLGCDSNPFVASATMDM 580

Query: 595 FGRAGHLG------------------------MAHNFIQ----------NMPVRPDASIW 620
           +G+ G +                           H F +          N+ V+PD   +
Sbjct: 581 YGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTF 640

Query: 621 GALLGACRIHGNMELGAVASDRLFE 645
            +LL AC   G +E G    D + +
Sbjct: 641 VSLLSACSHGGMVEEGLAYYDSMIK 665



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 177/389 (45%), Gaps = 31/389 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHAL++  G  + V     LV  YA  G +  ++  F  +  R+  TWN++I  +   
Sbjct: 353 KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADS 412

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVF 179
               EA+  F +     G+  ++ T   VL AC      L  G  IH  ++  GF+ D +
Sbjct: 413 EEPDEALKAF-KLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEY 471

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SL+ MY + G  N +  +FD +  +++ +WNAM++     G+  EAL  L EMR  G
Sbjct: 472 VQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAG 531

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V++D  + +  L   A+   +  G  +H   VK G + N FV++  ++MY K G +   L
Sbjct: 532 VNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVL 591

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           R+  + + R  +SWN + +++ +      A   F  M   G++PD +T VSL S  +   
Sbjct: 592 RIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACS--- 648

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDMYAKLGIINSACAVFEGLP 408
                   HG ++  G    D +I              ++D+  + G    A    + +P
Sbjct: 649 --------HGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMP 700

Query: 409 VKDVIS-WNTLITGYAQNG---LASEAIE 433
           V      W +L+     +G   L  +A+E
Sbjct: 701 VSPTDHVWRSLLAACKTHGNLELGRKAVE 729



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 8/266 (3%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H   +HA ++++G     +    L+  YA  GDL+ S + FD ++ +N   WN+M++ 
Sbjct: 451 LEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAA 510

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
               G + EA+    +    +G+  D ++F   L A   L    +G+++H   +KLG + 
Sbjct: 511 NAHHGHMEEALKFLLEMR-RAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDS 569

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           + FVA++ + MY + G  +   ++      R   SWN + S + + G   +A +   EM 
Sbjct: 570 NPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMI 629

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMM 295
             GV  D +T  S+L  C+    +  GL  +  ++K  G+   +     +I++  + G  
Sbjct: 630 NLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRF 689

Query: 296 RHALRVFDQM--MERDVVSWNSIIAA 319
             A     +M     D V W S++AA
Sbjct: 690 AEAETFIKEMPVSPTDHV-WRSLLAA 714


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/658 (38%), Positives = 393/658 (59%), Gaps = 2/658 (0%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K IH  +L+L  + D ++   +L     FG  N ++ +F  +   +   WN MI G    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               +A+ +   MR  G   +  T+  +L  CAR  ++  GL IH  +VK G + ++FV 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L+++Y K      AL+VFD + +++VVSW +II  Y  S     A G F  + + G++
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  +LV + +  A+L DC +   +  +I   G    +V +  +++DMY K G +  A  
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSG-MGRNVFVATSLLDMYVKCGNLERANL 271

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F  +P KD++SW+T+I GYA NGL  +A+++F  M+  N + P+  T V +L A + +G
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN-LKPDCYTMVGVLSACATLG 330

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  GI   + + +N    +  + T L+DMY KCG +  A  +F  + R   V WNA++ 
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMV 390

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
              ++G      + F  +   G+RPD  TF+ LL  C+H G V+EG+++F+ M+  F + 
Sbjct: 391 GLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT 450

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HYGCMVDL GRAG L  AH  I NMP++P+A +WGALLG C++H +  L      +
Sbjct: 451 PSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKK 510

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E++  N G YV +SNIY+   +WE  +++RS  +++ ++K    S IE++  V  F  
Sbjct: 511 LIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLV 570

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+++H   EKIY +L  L  ++K++G+VP   FVL D+EE+EKEH L  HSE+LA+AFG+
Sbjct: 571 GDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGL 630

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+SPP   I++ KNLRVCGDCH+  K IS+IT+REII+RD+NRFH F DG CSC DYW
Sbjct: 631 IASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 240/463 (51%), Gaps = 20/463 (4%)

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
           + G  ++S+  F  +   N++ WN+MI   V      +A+   Y      G  P+ +T P
Sbjct: 60  DFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIH-LYGSMRGGGFLPNNFTIP 118

Query: 151 PVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            VLKAC   +D   G KIH  ++K G++ DVFV  SLL +Y +    + A K+FDD+P +
Sbjct: 119 FVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +  SW A+I+GY  SG+  EA+    ++   G+  D  ++  +L  CAR  +  SG  I 
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID 238

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            YI   G+  N+FV+ +L++MY K G +  A  +F  M E+D+VSW+++I  Y  +  P 
Sbjct: 239 RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ 298

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  MQ   ++PD  T+V + S  A L            +M R  F+ + ++G A+
Sbjct: 299 QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASS-LMDRNEFLSNPVLGTAL 357

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMY+K G +  A  +F  +  KD + WN ++ G + NG A     +F ++E+ + I P+
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK-HGIRPD 416

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT-------CLVDMYGKCGRID 500
           + T++ +L   +H G + +G +    + +      VF  T       C+VD+ G+ G ++
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKR------VFSLTPSIEHYGCMVDLLGRAGLLN 470

Query: 501 DAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           +A  L   +P + ++V W A++    +H     A    +++++
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/760 (34%), Positives = 435/760 (57%), Gaps = 11/760 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++   +V SG    +     L++   ++G++ ++ + FD +S R+  +WNS+ + Y + 
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222

Query: 124 GRLSEAVDCFYQFTLTSGLRPDF-----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDV 178
           G + E+   F  F+L      +       T   VL    +   G+ IH  V+K+GF+  V
Sbjct: 223 GHIEES---FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 279

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V  +LL MY   G +  A  +F  MP +D  SWN++++ +   G +++AL +L  M   
Sbjct: 280 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 339

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G S++ +T  S L  C   D    G ++H  +V  GL +N  + N L++MY K G M  +
Sbjct: 340 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 399

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RV  QM  RDVV+WN++I  Y +  DP  A   F TM+  G+  + +T+VS+ S     
Sbjct: 400 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 459

Query: 359 NDC-RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            D     + +H +I+  G F  D  + N+++ MYAK G ++S+  +F GL  +++I+WN 
Sbjct: 460 GDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 518

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           ++   A +G   E +++   M     ++ +Q ++   L A + +  L +G ++H   +K 
Sbjct: 519 MLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 577

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               D F+     DMY KCG I + + +       S   WN +IS  G HG  ++    F
Sbjct: 578 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 637

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +ML+ G++P H+TFVSLLTACSH GLV +G  Y+ M+  +FG++P ++H  C++DL GR
Sbjct: 638 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 697

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           +G L  A  FI  MP++P+  +W +LL +C+IHGN++ G  A++ L +++ E+   YVL 
Sbjct: 698 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN++A  G+WE V+ VR     + +KK    S +++ +KV  F  G+RTHP+  +IY +L
Sbjct: 758 SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
            ++   +K  GYV D S  LQD +E++KEH L +HSERLA+A+ ++S+P  S ++IFKNL
Sbjct: 818 EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 877

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           R+C DCH+  KF+S++  R I++RD  RFHHF+ G+   G
Sbjct: 878 RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 287/547 (52%), Gaps = 14/547 (2%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGK 163
           RN  +WN+M+S  VR G   E ++ F++     G++P  +    ++ AC        +G 
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGME-FFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV 62

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V K G   DV+V+ ++LH+Y  +GL + +RK+F++MP R+  SW +++ GY   G
Sbjct: 63  QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              E +DI   MR EGV  +  +++ ++  C    +   G  I   +VK GLE  L V N
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+M    G + +A  +FDQM ERD +SWNSI AAY Q+     +   F+ M++   + 
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           +  T+ +L S++  ++  +  R +HG +++ G F   V + N ++ MYA  G    A  V
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGAGRSVEANLV 301

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +P KD+ISWN+L+  +  +G + +A+ +   M    + + N  T+ S L A      
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDF 360

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
             +G  +H  V+ + L ++  +   LV MYGK G + ++  +  Q+PR   V WNA+I  
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH--MMQEEFGI 581
           +      DKAL  F+ M  EGV  ++IT VS+L+AC   G + E  +  H  ++   F  
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVA 639
             H+K+   ++ ++ + G L  + +    +  R +   W A+L A   HG+ E  L  V+
Sbjct: 481 DEHVKN--SLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGEEVLKLVS 537

Query: 640 SDRLFEV 646
             R F V
Sbjct: 538 KMRSFGV 544



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 170/576 (29%), Positives = 285/576 (49%), Gaps = 13/576 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  +  SG +  V+ ST +++ Y   G +S SR  F+ +  RNV +W S++  Y   G
Sbjct: 63  QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
              E +D  Y+     G+  +  +   V+ +C  L D   G++I   V+K G E  + V 
Sbjct: 123 EPEEVID-IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ M    G  + A  +FD M  RD+ SWN++ + Y Q+G+  E+  I   MR     
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           ++  TV+++L V    D+   G  IH  +VK G +  + V N L+ MYA  G    A  V
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F QM  +D++SWNS++A++      + A G   +M  +G   + +T  S  +     +  
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              R +HG ++  G F    IIGNA+V MY K+G ++ +  V   +P +DV++WN LI G
Sbjct: 362 EKGRILHGLVVVSGLFYNQ-IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG-ALRQGIKIHARVIKNCLC 480
           YA++    +A+  FQ M     ++ N  T VS+L A    G  L +G  +HA ++     
Sbjct: 421 YAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  V   L+ MY KCG +  +  LF  +   + + WNA+++ +  HG G++ L    +M
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              GV  D  +F   L+A +   ++ EGQ+  H +  + G +     +    D++ + G 
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAVKLGFEHDSFIFNAAADMYSKCGE 598

Query: 601 LGMAHNFIQNMPVRPDASI--WGALLGACRIHGNME 634
           +G     ++ +P   + S+  W  L+ A   HG  E
Sbjct: 599 IG---EVVKMLPPSVNRSLPSWNILISALGRHGYFE 631



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 213/426 (50%), Gaps = 9/426 (2%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL-S 262
           MPVR+  SWN M+SG  + G  +E ++   +M   G+      +AS++  C RS ++   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G+ +H ++ K GL  +++VS  ++++Y  +G++  + +VF++M +R+VVSW S++  Y  
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
             +P      +  M+  G+  +  ++  + S    L D    R + G +++ G     + 
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG-LESKLA 179

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + N+++ M   +G ++ A  +F+ +  +D ISWN++   YAQNG   E+  +F +M   +
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC--LVDMYGKCGRID 500
           +   N  T  ++L    HV   + G  IH  V+K  + FD  V  C  L+ MY   GR  
Sbjct: 240 D-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK--MGFDSVVCVCNTLLRMYAGAGRSV 296

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +A  +F Q+P    + WN++++     G+   AL     M+  G   +++TF S L AC 
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
                 +G R  H +    G+  +      +V ++G+ G +  +   +  MP R D   W
Sbjct: 357 TPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAW 414

Query: 621 GALLGA 626
            AL+G 
Sbjct: 415 NALIGG 420



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 6/265 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LHA +V +G          L+  YA  GDLS S+  F+ +  RN+ TWN+M++ 
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW 176
               G   E +    +   + G+  D ++F   L A   L    +G+++H   +KLGFE 
Sbjct: 523 NAHHGHGEEVLKLVSKMR-SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F+  +   MY + G      K+      R   SWN +IS   + G   E      EM 
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMM 295
             G+    +T  S+L  C+    +  GL  +  I +  GLE  +     +I++  + G +
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701

Query: 296 RHALRVFDQM-MERDVVSWNSIIAA 319
             A     +M M+ + + W S++A+
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLAS 726


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 292/793 (36%), Positives = 446/793 (56%), Gaps = 25/793 (3%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD- 103
           + F  L +SC +       K +HA L+             L++ Y+  GD + +   F+ 
Sbjct: 63  VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122

Query: 104 --HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
                 R+V +W++M++ Y   GR  +A+  F +F L  GL P+ Y +  V++AC N   
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDF 181

Query: 159 LVDGKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLA-NVARKLFDDMPVRDSGSWNAMI 216
           +  G+     ++K G FE DV V  SL+ M+ +   +   A K+FD M   +  +W  MI
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +   Q G   EA+    +M L G   D  T++S+   CA  +N+  G  +H + ++ GL 
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301

Query: 277 FNLFVSNNLINMYAKF---GMMRHALRVFDQMMERDVVSWNSIIAAY-EQSNDPITAHGF 332
            +  V  +L++MYAK    G +    +VFD+M +  V+SW ++I  Y +  N    A   
Sbjct: 302 DD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359

Query: 333 FTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           F+ M  Q  ++P+  T  S       L+D R  + V G   +RG    +  + N+V+ M+
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMF 418

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K   +  A   FE L  K+++S+NT + G  +N    +A ++   + E  E+  +  T+
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTF 477

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+L   ++VG++R+G +IH++V+K  L  +  V   L+ MY KCG ID A  +F  +  
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
            + + W ++I+    HG   + L  F QM++EGV+P+ +T+V++L+ACSH GLVSEG R+
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F+ M E+  IKP ++HY CMVDL  RAG L  A  FI  MP + D  +W   LGACR+H 
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           N ELG +A+ ++ E+D      Y+ +SNIYA  GKWE   E+R   ++R L K  G S I
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV----EEDEKEH 747
           EV +K+  FY G+  HP   +IYDEL  L  ++K  GYVPD   VL  +    +E EKE 
Sbjct: 718 EVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKER 777

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           +L  HSE++A+AFG+IS+    P+++FKNLRVCGDCHN  K+IS ++ REI++RD NRFH
Sbjct: 778 LLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFH 837

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSC DYW
Sbjct: 838 HFKDGKCSCNDYW 850



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 235/485 (48%), Gaps = 28/485 (5%)

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           +I  +  +G+   A+  LD M  +G+  MD +T +S+L  C R+ +   G L+H  +++ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM---ERDVVSWNSIIAAYEQSNDPITAH 330
            +E +  + N+LI++Y+K G    A  VF+ M    +RDVVSW++++A Y  +   + A 
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F    + G+ P+     ++    +  +     R   GF+M+ G F  DV +G +++DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211

Query: 391 YAK-LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           + K      +A  VF+ +   +V++W  +IT   Q G   EAI  F  M   +    ++ 
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKF 270

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLF 506
           T  S+  A + +  L  G ++H+  I++ L  D  V   LVDMY KC   G +DD   +F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328

Query: 507 YQVPRSSSVPWNAIISCHGIH-GQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGL 564
            ++   S + W A+I+ +  +     +A+N F +M+ +G V P+H TF S   AC   G 
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC---GN 385

Query: 565 VSEGQRYFHMMQEEF--GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           +S+ +    ++ + F  G+  +      ++ +F ++  +  A    +++  +   S    
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVG-----YYVLMSNIYANVGKWEGVDEVRSLA 677
           L G CR + N E    A   L E+    +G     +  L+S + ANVG     +++ S  
Sbjct: 446 LDGTCR-NLNFEQ---AFKLLSEITERELGVSAFTFASLLSGV-ANVGSIRKGEQIHSQV 500

Query: 678 RDRGL 682
              GL
Sbjct: 501 VKLGL 505


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/763 (35%), Positives = 428/763 (56%), Gaps = 36/763 (4%)

Query: 85  LVNFYANLGDLSFSRHTFDHI---SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           L++ Y+  G L  ++  FD +   S R+V TWN+MIS ++R G   EA+  F        
Sbjct: 48  LISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGA 107

Query: 142 LRPDFYTFPPVLKAC-----RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
             P+  TF  VL +C      +L D + IH  ++  G E + FV  +L+  Y + G  + 
Sbjct: 108 PPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDD 167

Query: 197 ARKLF----DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           A ++F    D+ P     + +AMIS   Q+G   E+L +   M LEG     +T+ S+L 
Sbjct: 168 AWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLN 227

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNN-----LINMYAKFGMMRHALRVFDQMME 307
            C    ++L       ++++  +E      +N     L+  YA+   +  A   FD +  
Sbjct: 228 AC----SMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQS 283

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNS-- 364
            DVVSWN++ AAY Q + P  A   F  M   G++P + T ++ LT+  A      ++  
Sbjct: 284 PDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIG 343

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL-PVK-DVISWNTLITGY 422
           + +   +   G    D  + NA ++MYAK G +  A AVFE + P + D I+WN+++  Y
Sbjct: 344 KRIQSLLEEAG-LEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAY 402

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
             +GL  EA E+FQ ME    + PN+ T+V++L A +   ++ QG +IHARV+ N    D
Sbjct: 403 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESD 462

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-----VPWNAIISCHGIHGQGDKALNFF 537
             +   L++MY KCG +DDA ++F    +SSS     + W ++++ +  +GQ ++AL  F
Sbjct: 463 TVIQNALLNMYAKCGSLDDAQAIF---DKSSSNQEDVIAWTSLVAGYAQYGQAERALKLF 519

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
             M  +GVRP+HITF+S LTAC+H G + +G      M  + GI P  KH+ C+VDL GR
Sbjct: 520 WTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGR 579

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
            G L  A   ++    + D   W ALL AC+    +E G   ++R+ ++D E    Y+++
Sbjct: 580 CGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVL 638

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           +++YA  G+W     +R    D+G++  PG S++EVN ++  F  G+++HPK E+IY EL
Sbjct: 639 ASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLEL 698

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L   +K+ GYV D   VL DV ++ KE +L  HSE+LAIAFG++S+P  SP+++ KNL
Sbjct: 699 ERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNL 758

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCH  TK IS++T R+I++RDS+R+HHF  G CSCGDYW
Sbjct: 759 RVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 192/403 (47%), Gaps = 28/403 (6%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM--- 305
           +++  C+   N+ +G  IH  I     E N  + N LI+MY+K G +  A + FD++   
Sbjct: 12  ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRA 71

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI-QPDLLTLVSL--TSIVAQLNDCR 362
            +RDVV+WN++I+A+ ++     A   F  M   G   P+ +T VS+  + + A L    
Sbjct: 72  SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLE 131

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF----EGLPVKDVISWNTL 418
           + R++HG I+  G    +  +  A+VD Y KLG ++ A  VF    +  P   +++ + +
Sbjct: 132 DVRAIHGRIVGAG-IEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH--VGA-----LRQGIKIH 471
           I+   QNG   E++ +F  M       P+  T VS+L A S   VG+     L Q +++ 
Sbjct: 191 ISACWQNGWPQESLRLFYAM-NLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVV 249

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           +    N L       T L+  Y +   +  A + F  +     V WNA+ + +  H +  
Sbjct: 250 SATRDNVL------GTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPR 303

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSH--SGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           +AL  F +ML EGVRP   TF++ LTAC+       S   +    + EE G++       
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVAN 363

Query: 590 CMVDLFGRAGHLGMAHNFIQNM-PVRPDASIWGALLGACRIHG 631
             ++++ + G L  A    + + P R D   W ++L A   HG
Sbjct: 364 ATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG 406



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           E+ PN    ++++ A S +G L  G +IH+++       +  +   L+ MY KCG + DA
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 503 MSLFYQVPRSSS---VPWNAIISCHGIHGQGDKALNFFRQMLDEGV-RPDHITFVSLLTA 558
              F ++PR+S    V WNA+IS    +G   +AL  FR M  +G   P+ +TFVS+L +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 559 CSHSGLVS-EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN-FIQNMPVRPD 616
           C  +GL+S E  R  H      GI+        +VD +G+ G L  A   F++     P 
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 617 ASI--WGALLGACRIHG 631
            S+    A++ AC  +G
Sbjct: 182 TSLVTCSAMISACWQNG 198



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 16/186 (8%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS--YRN 109
           D   S T +   + +HA +V +G          L+N YA  G L  ++  FD  S    +
Sbjct: 436 DASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQED 495

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH--C 167
           V  W S+++ Y + G+   A+  F+      G+RP+  TF   L AC +   G K+   C
Sbjct: 496 VIAWTSLVAGYAQYGQAERALKLFWTMQ-QQGVRPNHITFISALTACNH---GGKLEQGC 551

Query: 168 SVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            +L  G   D  +  +  H  C      R G  + A KL +     D  +W A++   C+
Sbjct: 552 ELLS-GMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDA-CK 609

Query: 222 SGNAVE 227
           +   +E
Sbjct: 610 NSKELE 615


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/662 (38%), Positives = 395/662 (59%), Gaps = 5/662 (0%)

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           +DG  +H  ++K GF     V  +L+  Y +      A  +FD+MP RD  SWN++I G 
Sbjct: 1   MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
             +G   +A+++   M LEG  +D  T+ S++P C +S     G ++H Y V+ GL    
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            + N L++MY+     R   ++F  M +++VVSW ++I +Y ++       G F  M   
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIIN 398
           GI+PD+  + S     A     ++ +SVHG+ +R G  +E+V+ + NA+++MY K G + 
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNG--IEEVLPVANALMEMYVKCGYME 238

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  +F+ +  KD ISWNTLI GY+++ LA+EA  +F  M    ++ PN  T   ILPA 
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEM--LLQLRPNAVTMACILPAA 296

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + + +L +G ++HA  ++     D FVA  LVDMY KCG +  A  LF  +   + + W 
Sbjct: 297 ASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWT 356

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +I+ +G+HG+G  A+  F QM   G++PD  +F ++L ACSHSGL  EG R+F+ M+ E
Sbjct: 357 IMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNE 416

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
             I+P LKHY CMVDL    G+L  A+ FI+ MP+ PD+SIW +LL  CRIH N++L   
Sbjct: 417 HRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEK 476

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            ++ +FE++ EN GYYVL++NIYA   +WE V ++++    RGL++  G S IEV  K  
Sbjct: 477 VAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAH 536

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
           IF+  NR HP+  +I + L ++  +M+  G+ P K + L   ++   +  L  HS +LA+
Sbjct: 537 IFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAV 596

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+++     PI++ KN RVC  CH   KFIS++  REII+RDSNRFHHF++G CSC  
Sbjct: 597 AFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRG 656

Query: 819 YW 820
           YW
Sbjct: 657 YW 658



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 272/555 (49%), Gaps = 22/555 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  LV  G          L++FYA    +  +   FD +  R++ +WNS+I      G 
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAA 182
             +AV+ F +  L  G   D  T   V+ AC        G  +H   ++ G   +  +  
Sbjct: 66  YDKAVELFVRMWL-EGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGN 124

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +LL MY          K+F +M  ++  SW AMI+ Y ++G+  +   +  EM LEG+  
Sbjct: 125 ALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRP 184

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D   + S L   A ++++  G  +H Y +++G+E  L V+N L+ MY K G M  A  +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D + ++D +SWN++I  Y +SN    A   F  M    ++P+ +T+  +    A L+   
Sbjct: 245 DHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLE 303

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             R +H + +RRG ++ED  + NA+VDMY K G +  A  +F+ L  K++ISW  +I GY
Sbjct: 304 RGREMHAYAVRRG-YLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGY 362

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCF 481
             +G   +AI +F+ M+    I P+ G++ +IL A SH G   +G +  +A   ++ +  
Sbjct: 363 GMHGRGRDAIALFEQMKGSG-IQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            +    C+VD+    G + +A      +P    S  W +++    IH +  K      +M
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH-RNVKLAEKVAEM 480

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRY--FHMMQEEFGIKPHLKHYGC-MVDLFGR 597
           + E + P++  +  LL     + + +E +R+     ++ + G +   ++ GC  +++ G+
Sbjct: 481 VFE-LEPENTGYYVLL-----ANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGK 534

Query: 598 AGHLGMAHNFIQNMP 612
           A H+  A N  +N P
Sbjct: 535 A-HIFFAEN--RNHP 546



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 202/440 (45%), Gaps = 38/440 (8%)

Query: 44  ESREIDFDDLFQ---SCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           E +E+D   L     +C + H+      +H   V +G I        L++ Y+N  D   
Sbjct: 79  EGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRS 138

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC- 156
           +   F ++  +NV +W +MI+ Y R G   +    F +  L  G+RPD +     L A  
Sbjct: 139 TNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL-EGIRPDVFAITSALDAFA 197

Query: 157 --RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
              +L  GK +H   ++ G E  + VA +L+ MY + G    AR +FD +  +D+ SWN 
Sbjct: 198 GNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNT 257

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +I GY +S  A EA  + +EM L+ +  + +T+A ILP  A   ++  G  +H Y V+ G
Sbjct: 258 LIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRG 316

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
              + FV+N L++MY K G +  A R+FD +  ++++SW  +IA Y        A   F 
Sbjct: 317 YLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFE 376

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--------- 385
            M+ +GIQPD        S  A L  C      H  +   GW   + +            
Sbjct: 377 QMKGSGIQPD------AGSFSAILYACS-----HSGLRDEGWRFFNAMRNEHRIEPKLKH 425

Query: 386 --AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
              +VD+    G +  A    E +P++ D   W +L+ G   +     A +V +M+    
Sbjct: 426 YACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV---F 482

Query: 443 EINP-NQGTYVSILPAYSHV 461
           E+ P N G YV +   Y+  
Sbjct: 483 ELEPENTGYYVLLANIYAEA 502


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/744 (36%), Positives = 425/744 (57%), Gaps = 43/744 (5%)

Query: 114 NSMISVYVRCGRLSEAVDCF------------------------------YQFTLTSGLR 143
            S+I  +V  GR+ EA D F                              Y+  L +G R
Sbjct: 58  KSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGAR 117

Query: 144 PDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD +TFP VLK C     L +G+  H +V+KLG   DV+ A SL+ +Y + GL   A ++
Sbjct: 118 PDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVCARSDN 259
           FD MP RD  SWN M+ GY  +G    AL    EM     V  D + V + L  C     
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  IH Y ++HGLE ++ V  +L++MY K G +  A  VF +M  R VV+WN +I  
Sbjct: 238 LALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGG 297

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           Y  +  P+ A   F  M+  G Q +++T ++L +  AQ       RSVH +++RR  F+ 
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRR-HFLP 356

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
            V++  A+++MY K+G + S+  +F  +  K ++SWN +I  Y    +  EAI +F  +E
Sbjct: 357 HVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALF--LE 414

Query: 440 ECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
             N+ + P+  T  +++PA+  +G++RQ  ++H+ ++K        +   ++ MY +CG 
Sbjct: 415 LLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGN 474

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           I  +  +F ++P    + WN II  + IHGQG  AL  F +M   G+ P+  TFVS+LTA
Sbjct: 475 IVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTA 534

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS SGL +EG + F+ MQ+E+G+ P ++HYGCM DL GRAG L     FI+NMP+ P + 
Sbjct: 535 CSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSR 594

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWG+LL A R   ++++   A++R+F+++  N G YV++S++YA+ G+WE V+ +RSL +
Sbjct: 595 IWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMK 654

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
           ++GL++T   S +E+NNK   F  G+ +HP+ EKI+ E  ++ +  +++G   D S  L+
Sbjct: 655 EKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIH-EFSDILS--RNIGEDLDSSSNLR 711

Query: 739 DVE--EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           D +        +   HS RLA+AFG+ISS   SP+ + KN+RVC  CH+  K IS+ + R
Sbjct: 712 DSDPFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYSGR 771

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           +I+V D+  +H F DG C CGDYW
Sbjct: 772 KIVVGDTKIYHIFSDGSCCCGDYW 795



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 263/516 (50%), Gaps = 24/516 (4%)

Query: 17  LPL--LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLV 71
           LPL  L A+R +  A A      PD          F  + + C +   L   +  HA ++
Sbjct: 100 LPLDALAAYRAMLDAGAR-----PD-------RFTFPVVLKCCARAGALGEGRAAHAAVI 147

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
             G    V+++  LV  YA LG +  +   FD +  R++ +WN+M+  YV  G  + A+ 
Sbjct: 148 KLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALA 207

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMY 188
           CF +      +  D       L AC     L  G++IH   ++ G E DV V  SL+ MY
Sbjct: 208 CFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMY 267

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
           C+ G    A  +F  MP+R   +WN MI GY  +   V+A D   +MR++G  ++ +T  
Sbjct: 268 CKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAI 327

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           ++L  CA++++ L G  +H Y+V+     ++ +   L+ MY K G +  + ++F Q+ ++
Sbjct: 328 NLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDK 387

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
            +VSWN++IAAY        A   F  +    + PD  T+ ++      L   R  + +H
Sbjct: 388 TLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMH 447

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            +I++ G + +  +I NAV+ MYA+ G I ++  +F+ +P KDVISWNT+I GYA +G  
Sbjct: 448 SYIVKLG-YGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQG 506

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVAT 487
             A+E+F  M +C+ + PN+ T+VS+L A S  G   +G K  ++   +  +   +    
Sbjct: 507 KIALEMFDEM-KCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYG 565

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
           C+ D+ G+ G + + +     +P   +S  W ++++
Sbjct: 566 CMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLT 601



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 180/408 (44%), Gaps = 17/408 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H   +  G  + V   T LV+ Y   G++ F+ + F  +  R V TWN MI  Y   
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
            R  +A DCF Q  +  G + +  T   +L AC        G+ +H  V++  F   V +
Sbjct: 302 ERPVDAFDCFMQMRV-DGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +LL MY + G    + K+F  +  +   SWN MI+ Y       EA+ +  E+  + +
Sbjct: 361 ETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPL 420

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T+ +++P      +I     +H YIVK G   +  + N +++MYA+ G +  +  
Sbjct: 421 YPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASRE 480

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLN 359
           +FD+M  +DV+SWN+II  Y        A   F  M+ +G++P+  T VS LT+      
Sbjct: 481 IFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGL 540

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 418
           +    +  +      G   +    G  + D+  + G +       E +P+      W +L
Sbjct: 541 EAEGWKEFNSMQQEYGMIPQIEHYG-CMTDLLGRAGELREVLRFIENMPIAPTSRIWGSL 599

Query: 419 ITGYAQNG---LASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +T         +A  A E +FQ+         N G YV +   Y+  G
Sbjct: 600 LTASRNKNDIDIAEYAAERIFQLEHN------NTGCYVVLSSMYADAG 641


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/554 (44%), Positives = 353/554 (63%), Gaps = 2/554 (0%)

Query: 267  HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
            H  I  +GL+++  +      MY  F  +  A  VF+ +       WN +I  +      
Sbjct: 740  HAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRF 799

Query: 327  ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
            +++   ++ M + G++PD           A L+D +  + +H  ++  G    D+ +  A
Sbjct: 800  LSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGC-SNDLFVDAA 858

Query: 387  VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
            +VDMYAK G I +A  VF+ + V+D++SW ++I+GYA NG  SE +  F +M     I P
Sbjct: 859  LVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI-P 917

Query: 447  NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
            N+ + +S+L A  ++GALR+G   H+ VI+    FD+ VAT ++DMY KCG +D A  LF
Sbjct: 918  NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977

Query: 507  YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +      V W+A+I+ +GIHG G KA++ F QM+  GVRP H+TF  +L+ACSHSGL+ 
Sbjct: 978  DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037

Query: 567  EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            EG+ YF +M EEF I   L +Y CMVDL GRAG L  A + I+NMPV PDASIWG+LLGA
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097

Query: 627  CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
            CRIH N++L    +D LF +D  + GY+VL+SNIYA   +W  V++VR +   RG  K  
Sbjct: 1098 CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQ 1157

Query: 687  GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
            G+S +E +N+V  F  G+R+HP++EK+Y +L  L A MK LGYVP   FVL D+EE+ KE
Sbjct: 1158 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKE 1217

Query: 747  HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
              L+ HSERLAIAFG+I++ P + ++I KNLR+CGDCHN  K IS+I  R I+VRD +RF
Sbjct: 1218 AALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRF 1277

Query: 807  HHFKDGICSCGDYW 820
            H F+DG+CSCGDYW
Sbjct: 1278 HRFEDGVCSCGDYW 1291



 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/697 (37%), Positives = 411/697 (58%), Gaps = 12/697 (1%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DLFQ+C     V +LH+ +  +G +   F +TKL + YA    L  +R  FD   + NV+
Sbjct: 9   DLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVH 68

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCS 168
            WNS +  Y R  +  E +  F+    T+G  PD +T P  LKAC   R L  GK IH  
Sbjct: 69  LWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF 128

Query: 169 VLK---LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
             K   +G   D+FV ++L+ +Y + G    A K+F++    D+  W +M++GY Q+ + 
Sbjct: 129 AKKNDEIGS--DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186

Query: 226 VEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
            EAL +  +M  ++ V +DP+T+ S++  CA+  N+ +G  +H  +++   + +L + N+
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+N+YAK G  + A  +F +M E+DV+SW+++IA Y  +     A   F  M +   +P+
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T+VS     A   +    + +H   + +G F  D  +  A++DMY K    + A  +F
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKG-FELDFSVSTALIDMYMKCSCPDEAVDLF 365

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + LP KDV+SW  L++GYAQNG+A +++ VF+ M   + I P+    V IL A S +G  
Sbjct: 366 QRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS-DGIQPDAVAVVKILAASSELGIF 424

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           +Q + +H  V+++    +VFV   L+++Y KCG + DA+ LF  +     V W+++I+ +
Sbjct: 425 QQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY 484

Query: 525 GIHGQGDKALNFFRQML-DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           GIHG+G +AL  F QM+ +  VRP+++TF+S+L+ACSH+GLV EG + F  M  ++ ++P
Sbjct: 485 GIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRP 544

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
             +H+G MVDL GR G LG A + I  MP+     +WGALLGACRIH N+E+G  A+  L
Sbjct: 545 DSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNL 604

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
           F +D  + GYY+L+SNIYA  GKW+ V E+R+  ++RGLKK  G S +EV   V  F   
Sbjct: 605 FWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLAS 664

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           +R HP  +KIY+ LR L A+M    Y+PD  F+L D 
Sbjct: 665 DRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDT 701



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 181/374 (48%), Gaps = 22/374 (5%)

Query: 56   SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
            SC K  H K     L    +I T F+       Y +   +  +   F+ I     + WN 
Sbjct: 734  SCLKKTHAKIFAYGLQYDSRILTKFAI-----MYVSFNRIDAASIVFEDIPNPCSFLWNV 788

Query: 116  MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
            MI  +   GR   +++  Y   +  GL+PD + FP  LK+C  L D   GK IH  ++  
Sbjct: 789  MIRGFATDGRFLSSLE-LYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCC 847

Query: 173  GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
            G   D+FV A+L+ MY + G    AR +FD M VRD  SW +MISGY  +G   E L   
Sbjct: 848  GCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFF 907

Query: 233  DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            D MR  GV  + +++ S+L  C     +  G   H Y+++ G EF++ V+  +++MY+K 
Sbjct: 908  DLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKC 967

Query: 293  GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
            G +  A  +FD+   +D+V W+++IA+Y        A   F  M +AG++P  +T   + 
Sbjct: 968  GSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCV- 1026

Query: 353  SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV------VDMYAKLGIINSACAVFEG 406
                 L+ C +S  +    M      E+ +I   +      VD+  + G ++ A  + E 
Sbjct: 1027 -----LSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIEN 1081

Query: 407  LPVK-DVISWNTLI 419
            +PV+ D   W +L+
Sbjct: 1082 MPVEPDASIWGSLL 1095



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 20/335 (5%)

Query: 54   FQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
             +SC  L  ++R   +H  LV  G    +F    LV+ YA  GD+  +R  FD ++ R++
Sbjct: 825  LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884

Query: 111  YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHC 167
             +W SMIS Y   G  SE +  F+    +SG+ P+  +   VL AC N   L  G+  H 
Sbjct: 885  VSWTSMISGYAHNGYNSETLG-FFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHS 943

Query: 168  SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             V++ GFE+D+ VA +++ MY + G  ++AR LFD+   +D   W+AMI+ Y   G+  +
Sbjct: 944  YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003

Query: 228  ALDILDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLI 286
            A+D+ D+M   GV    +T   +L  C+ S  +  G +   L   +  +   L     ++
Sbjct: 1004 AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMV 1063

Query: 287  NMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSN-----DPITAHGFFTTMQQAG 340
            ++  + G +  A+ + + M +E D   W S++ A    N     + I  H F      AG
Sbjct: 1064 DLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAG 1123

Query: 341  IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
                    V L++I A  +       V   + RRG
Sbjct: 1124 YH------VLLSNIYAAKSRWNEVEKVRKMMARRG 1152



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 152/662 (22%), Positives = 272/662 (41%), Gaps = 71/662 (10%)

Query: 29  AAANSLQISPDCLEN--ESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSST 83
           AA  +L +  + +E   E   +      Q+C     L   K++H + V  G       ST
Sbjct: 287 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST 346

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
            L++ Y        +   F  +  ++V +W +++S Y + G   +++  F    L+ G++
Sbjct: 347 ALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNM-LSDGIQ 405

Query: 144 PDFYTFPPVLKACRNLVDGKK---IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD      +L A   L   ++   +H  V++ GF  +VFV ASL+ +Y + G    A KL
Sbjct: 406 PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKL 465

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDN 259
           F  M VRD   W++MI+ Y   G   EAL+I D+M +   V  + +T  SIL  C+ +  
Sbjct: 466 FKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGL 525

Query: 260 ILSGL-----LIHLYIVKHGLE-FNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVS 312
           +  GL     ++H Y ++   E F +     ++++  + G +  A+ + ++M +      
Sbjct: 526 VEEGLKIFDRMVHDYQLRPDSEHFGI-----MVDLLGRIGQLGKAMDIINRMPIPAGPHV 580

Query: 313 WNSIIAAYE-----QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           W +++ A       +  +    + F+     AG        + L++I A      N   +
Sbjct: 581 WGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGY------YILLSNIYAVDGKWDNVAEL 634

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG- 426
              I  RG      + G ++V++    G ++S  A     P    I +  L    AQ G 
Sbjct: 635 RTRIKERGL---KKMFGQSMVEVR---GGVHSFLASDRFHPDSQKI-YELLRKLEAQMGK 687

Query: 427 ---------LASEAIEVFQMMEECNEINPNQGTYVSI--LPAYSHVGALRQGIKIHARVI 475
                    L  +   V Q  +    I   +  Y +I   P    +       K HA++ 
Sbjct: 688 EVYIPDLDFLLHDTGAVLQFWQR---IKATESKYKTIGSAPGTDTISCFSCLKKTHAKIF 744

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
              L +D  + T    MY    RID A  +F  +P   S  WN +I      G+   +L 
Sbjct: 745 AYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLE 804

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            + +M+++G++PD   F   L +C+    +  G +  H      G    L     +VD++
Sbjct: 805 LYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRG-KVIHQHLVCCGCSNDLFVDAALVDMY 863

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
            + G +  A      M VR D   W +++     +G               +SE +G++ 
Sbjct: 864 AKCGDIEAARLVFDKMAVR-DLVSWTSMISGYAHNG--------------YNSETLGFFD 908

Query: 656 LM 657
           LM
Sbjct: 909 LM 910


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/760 (35%), Positives = 424/760 (55%), Gaps = 6/760 (0%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LH  ++  G    +F+   L+NFY     L  +   FD +   N  ++ ++   Y R 
Sbjct: 55  KHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRD 114

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFV 180
            +  +A+  F       G   + + F  +LK   ++        +H  V KLG   D FV
Sbjct: 115 HQFHQALH-FILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+  Y   G  +VAR +FDD+  +D  SW  M++ Y ++    E+L + ++MR+ G 
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +  T++  L  C   +    G  +H   +K   + +LFV   L+ +YAK G +  A R
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F++M + D++ W+ +IA Y QS+    A   F  M+Q  + P+  T  S+    A    
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + +H  +++ G    +V + NA++D+YAK G I ++  +FE LP ++ ++WNT+I 
Sbjct: 354 LDLGKQIHSCVLKFG-LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY Q G    A+ +F  M E +++ P + TY S+L A + + AL  G++IH+  IK    
Sbjct: 413 GYVQLGDGERAMNLFTHMLE-HDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  VA  L+DMY KCGRI+DA   F ++ +   V WNA+I  + +HG   +ALN F  M
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
                +P+ +TFV +L+ACS++GL+ +GQ +F  M +++ IKP ++HY CMV L GR G 
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGR 591

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
              A   I  +  +P   +W ALLGAC IH  ++LG V +  + E++  +   +VL+SN+
Sbjct: 592 FDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNM 651

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA  G+W+ V  VR   + + ++K PG S +E    V  F  G+ +HP  + I   L  L
Sbjct: 652 YATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWL 711

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             K +  GYVPD + VL DV++DEKE  L  HSERLA+A+G+I +P    I+I KNLR+C
Sbjct: 712 NKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRIC 771

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCH   K IS++ +REI++RD NRFHHF+ G+CSCGDYW
Sbjct: 772 IDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 240/472 (50%), Gaps = 4/472 (0%)

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           + GK +HC +LK G   D+F    LL+ Y +      A KLFD+MP  ++ S+  +  GY
Sbjct: 52  IAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGY 111

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            +     +AL  +  +  EG  ++P    ++L +    D       +H  + K G   + 
Sbjct: 112 SRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADA 171

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           FV   LI+ Y+  G +  A  VFD +  +D+VSW  ++A Y ++     +   F  M+  
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G +P+  T+         L      +SVHG  + +G +  D+ +G A++++YAK G I  
Sbjct: 232 GYKPNNFTISGALKSCLGLEAFNVGKSVHGCAL-KGCYDHDLFVGIALLELYAKSGEIID 290

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  +FE +P  D+I W+ +I  YAQ+  + EA+++F  M +   + PN  T+ S+L A +
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQ-TSVVPNNFTFASVLQACA 349

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
              +L  G +IH+ V+K  L  +VFV+  ++D+Y KCG I+++M LF ++P  + V WN 
Sbjct: 350 SSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNT 409

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           II  +   G G++A+N F  ML+  ++P  +T+ S+L A +    +  G +  H +  + 
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ-IHSLTIKT 468

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                      ++D++ + G +  A      M  R + S W A++    +HG
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVS-WNAMICGYSMHG 519


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/705 (39%), Positives = 397/705 (56%), Gaps = 38/705 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC---RFGLANVARKLFDDMPVRD 208
           +L  C+ L   + IH  ++K G     +  + LL +      F     A  +F+ +   +
Sbjct: 39  LLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPN 98

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN M  G+  S + V AL +   M   G+  +  T   +L  CA+S     G  IH 
Sbjct: 99  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHG 158

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS---------------- 312
           +++K G + +LFV  +LI++Y + G +  A +VFD+   RDVVS                
Sbjct: 159 HVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIES 218

Query: 313 ---------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
                          WN++I+ Y ++ +   A   F  M +  I+PD  T+V++ S  AQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ 278

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                  R VH +I   G F  ++ I N+++D+Y+K G + +AC +FEGL  KDVISWNT
Sbjct: 279 SGSIELGRQVHSWIDDHG-FGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNT 337

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK- 476
           LI GY    L  EA+ +FQ M    E  PN  T +SILPA +H+GA+  G  IH  + K 
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGE-RPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396

Query: 477 -NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
                    + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ D A +
Sbjct: 397 LKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFD 456

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M   G+ PD ITFV LL+ACS SG++  G+  F  M +++ I P L+HYGCM+DL 
Sbjct: 457 IFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLL 516

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           G +G    A   I NM + PD  IW +LL AC+I GN+ELG   +  L +++ EN G YV
Sbjct: 517 GHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYV 576

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SNIYA  G+W  V ++R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY 
Sbjct: 577 LLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 636

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
            L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I K
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 696

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLRVC +CH  TK IS+I +REII RD  RFHHF+DG+CSC DYW
Sbjct: 697 NLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 9/402 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G +  ++  FD I  ++V +WN+MIS Y   G   EA++ F + 
Sbjct: 198 RDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEM 257

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   V+ AC    ++  G+++H  +   GF  ++ +  SL+ +Y + G 
Sbjct: 258 -MKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGE 316

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +  +D  SWN +I GY       EAL +  EM   G   + +T+ SILP 
Sbjct: 317 LETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPA 376

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVS--NNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K         S   +LI+MYAK G +  A +VF+ ++ + + 
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        A   F+ M++ GI+PD +T V L S  ++       R +   +
Sbjct: 437 SWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            +       +     ++D+    G+   A  +   + ++ D + W +L+      G    
Sbjct: 497 TQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVEL 556

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
                Q + +    NP  G YV +   Y+  G   +  KI A
Sbjct: 557 GESFAQNLIKIEPENP--GCYVLLSNIYATAGRWNEVAKIRA 596


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/658 (38%), Positives = 393/658 (59%), Gaps = 2/658 (0%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K IH  +L+L  + D ++   +L     FG  N ++ +F  +   +   WN MI G    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               +A+ +   MR  G   +  T+  +L  CAR  ++  GL IH  +VK G + ++FV 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L+++Y K      AL+VFD + +++VVSW +II  Y  S     A G F  + + G++
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  +LV + +  A+L DC +   +  +I   G    +V +  +++DMY K G +  A  
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSG-MGRNVFVATSLLDMYVKCGNLERANL 271

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F  +P KD++SW+T+I GYA NGL  +A+++F  M+  N + P+  T V +L A + +G
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN-LKPDCYTMVGVLSACATLG 330

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  GI   + + +N    +  + T L+DMY KCG +  A  +F  + +   V WNA++ 
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMV 390

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
              ++G      + F  +   G+RPD  TF+ LL  C+H G V+EG+++F+ M+  F + 
Sbjct: 391 GLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT 450

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HYGCMVDL GRAG L  AH  I NMP++P+A +WGALLG C++H +  L      +
Sbjct: 451 PSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKK 510

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E++  N G YV +SNIY+   +WE  +++RS  +++ ++K    S IE++  V  F  
Sbjct: 511 LIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLV 570

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+++H   EKIY +L  L  ++K++G+VP   FVL D+EE+EKEH L  HSE+LA+AFG+
Sbjct: 571 GDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGL 630

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+SPP   I++ KNLRVCGDCH+  K IS+IT+REII+RD+NRFH F DG CSC DYW
Sbjct: 631 IASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 240/463 (51%), Gaps = 20/463 (4%)

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
           + G  ++S+  F  +   N++ WN+MI   V      +A+   Y      G  P+ +T P
Sbjct: 60  DFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIH-LYGSMRGGGFLPNNFTIP 118

Query: 151 PVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            VLKAC   +D   G KIH  ++K G++ DVFV  SLL +Y +    + A K+FDD+P +
Sbjct: 119 FVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDK 178

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +  SW A+I+GY  SG+  EA+    ++   G+  D  ++  +L  CAR  +  SG  I 
Sbjct: 179 NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID 238

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            YI   G+  N+FV+ +L++MY K G +  A  +F  M E+D+VSW+++I  Y  +  P 
Sbjct: 239 RYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQ 298

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  MQ   ++PD  T+V + S  A L            +M R  F+ + ++G A+
Sbjct: 299 QALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASS-LMDRNEFLSNPVLGTAL 357

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMY+K G +  A  +F  +  KD + WN ++ G + NG A     +F ++E+ + I P+
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEK-HGIRPD 416

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT-------CLVDMYGKCGRID 500
           + T++ +L   +H G + +G +    + +      VF  T       C+VD+ G+ G ++
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKR------VFSLTPSIEHYGCMVDLLGRAGLLN 470

Query: 501 DAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           +A  L   +P + ++V W A++    +H     A    +++++
Sbjct: 471 EAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/723 (36%), Positives = 409/723 (56%), Gaps = 6/723 (0%)

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD +  RN  ++ ++I  Y +  +  EA + F +     G   + + F  VLK   ++ 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLH-GEGHELNPFVFTTVLKLLVSME 60

Query: 161 ---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G+ +H  VLK+G+  + F+  +L+  Y   G  ++AR++FD++  +D  SW  MI+
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y ++    EAL+   +MR+ G   +  T A +L  C    N  +G  +H  ++K   E 
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +L+V   L+ +Y + G    A R F  M + DV+ W+ +I+ + QS     A   F  M+
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           +A + P+  T  S+    A +     S+++HG  ++ G    DV + NA++  YAK G I
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAG-LSTDVFVSNALMACYAKCGCI 299

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             +  +FE L  ++ +SWNT+I  Y Q G    A+ +F  M    ++   + TY SIL A
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLR-YQVQATEVTYSSILRA 358

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + + AL  G+++H    K     DV V   L+DMY KCG I DA  +F  +     V W
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           NAII  + +HG G +A+  F  M +   +PD +TFV +L+ACS++G + EG++YF  M++
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           ++GI+P ++HY CMV L GR+G+L  A  FI+++P  P   IW ALLGAC IH ++ELG 
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
           +++ R+ E++  +   +VL+SNIYA   +W  V  VR   + +G+KK PG S IE    V
Sbjct: 539 ISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNV 598

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F   + +H   + I   L  L  K +  GY P  + VL DVE+DEKE +L  HSERLA
Sbjct: 599 HCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLA 658

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +AFG++  P   PI+I KNLR+C DCH+  K IS+I  R+IIVRD NRFHHF++G CSC 
Sbjct: 659 LAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCA 718

Query: 818 DYW 820
           DYW
Sbjct: 719 DYW 721



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/469 (34%), Positives = 260/469 (55%), Gaps = 12/469 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  ++  G     F  T L++ Y+  G +S +R  FD IS +++ +W  MI+ Y     
Sbjct: 68  VHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDC 127

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
            SEA++ F Q  + +G +P+ +TF  VLKAC   +N   GK +HCSVLK  +E D++V  
Sbjct: 128 FSEALEFFSQMRV-AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGV 186

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
            LL +Y R G  + A + F DMP  D   W+ MIS + QSG + +AL+I  +MR   V  
Sbjct: 187 GLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIP 246

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           +  T +S+L   A  +++     IH + +K GL  ++FVSN L+  YAK G +  ++ +F
Sbjct: 247 NQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELF 306

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           + + +R+ VSWN+II +Y Q  D   A   F+ M +  +Q   +T  S+    A L    
Sbjct: 307 EALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALE 366

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               VH  +  +  + +DV +GNA++DMYAK G I  A  +F+ L ++D +SWN +I GY
Sbjct: 367 LGLQVH-CLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGY 425

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC---L 479
           + +GL  EAI++F +M+E  +  P++ T+V +L A S+ G L +G +    + ++     
Sbjct: 426 SMHGLGVEAIKMFNLMKE-TKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEP 484

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
           C + +  TC+V + G+ G +D A+     +P   SV  W A++    IH
Sbjct: 485 CMEHY--TCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 178/379 (46%), Gaps = 12/379 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  L +    K +H  ++ +   + ++    L+  Y   GD   +   F  + 
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
             +V  W+ MIS + + G+  +A++ F Q    + + P+ +TF  VL+A  ++      K
Sbjct: 210 KNDVIPWSFMISRFAQSGQSEKALEIFCQMR-RAFVIPNQFTFSSVLQASADIESLDLSK 268

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH   LK G   DVFV+ +L+  Y + G    + +LF+ +  R+  SWN +I  Y Q G
Sbjct: 269 TIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLG 328

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +   AL +   M    V    +T +SIL  CA    +  GL +H    K     ++ V N
Sbjct: 329 DGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN 388

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G ++ A  +FD +  RD VSWN+II  Y      + A   F  M++   +P
Sbjct: 389 ALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKP 448

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFI-MRRGWFMEDVIIG-NAVVDMYAKLGIINSAC 401
           D LT V + S  +  N  R       F  M++ + +E  +     +V +  + G ++ A 
Sbjct: 449 DELTFVGVLSACS--NTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAV 506

Query: 402 AVFEGLPVK-DVISWNTLI 419
              E +P +  V+ W  L+
Sbjct: 507 KFIEDIPFEPSVMIWRALL 525



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 155/338 (45%), Gaps = 12/338 (3%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  + Q+   +  +   K +H   + +G    VF S  L+  YA  G +  S   F+
Sbjct: 248 QFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFE 307

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +S RN  +WN++I  YV+ G    A+  F    L   ++    T+  +L+AC  L    
Sbjct: 308 ALSDRNDVSWNTIIVSYVQLGDGERALSLFSNM-LRYQVQATEVTYSSILRACATLAALE 366

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G ++HC   K  +  DV V  +L+ MY + G    AR +FD + +RD  SWNA+I GY 
Sbjct: 367 LGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYS 426

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNL 279
             G  VEA+ + + M+      D +T   +L  C+ +  +  G      + + +G+E  +
Sbjct: 427 MHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCM 486

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
                ++ +  + G +  A++  + +  E  V+ W +++ A    ND     G  +  + 
Sbjct: 487 EHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHND--VELGRISAQRV 544

Query: 339 AGIQP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
             ++P D  + V L++I A+     N   V   + R+G
Sbjct: 545 LELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKG 582


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/628 (39%), Positives = 390/628 (62%), Gaps = 6/628 (0%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A K+FD MP R+  +W  MI+ + Q G A +A+D+  +M L G   D  T +S+L  C  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF---GMMRHALRVFDQMMERDVVSW 313
              +  G  +H  +++ GL  ++ V  +L++MYAK    G +  + +VF+QM E +V+SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 314 NSIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
            +II AY QS +    A   F  M    I+P+  +  S+      L+D      V+ + +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           + G    + + GN+++ MYA+ G +  A   F+ L  K+++S+N ++ GYA+N  + EA 
Sbjct: 184 KLGIASVNCV-GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  + +   I  +  T+ S+L   + +GA+ +G +IH R++K     +  +   L+ M
Sbjct: 243 LLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y +CG I+ A  +F ++   + + W ++I+    HG   +AL  F +ML+ G +P+ IT+
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           V++L+ACSH G++SEGQ++F+ M +E GI P ++HY CMVDL GR+G L  A  FI +MP
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           +  DA +W  LLGACR+HGN ELG  A++ + E + ++   Y+L+SN++A+ G+W+ V +
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           +R   ++R L K  G S IEV N+V  F+ G  +HP+  +IY EL  L +K+K +GY+PD
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 541

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
             FVL D+EE++KE  L  HSE++A+AFG+IS+    PI+IFKNLRVCGDCH   K+IS 
Sbjct: 542 TDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISM 601

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
            T REI+VRDSNRFHH K+G+CSC DYW
Sbjct: 602 ATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 244/456 (53%), Gaps = 14/456 (3%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
           FD +  RN+ TW  MI+ + + G   +A+D F    L SG  PD +T+  VL AC     
Sbjct: 8   FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL-SGYVPDRFTYSSVLSACTELGL 66

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRDSGSWNAM 215
           L  GK++H  V++LG   DV V  SL+ MY +    G  + +RK+F+ MP  +  SW A+
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 216 ISGYCQSGNA-VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           I+ Y QSG    EA+++  +M    +  +  + +S+L  C    +  +G  ++ Y VK G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           +     V N+LI+MYA+ G M  A + FD + E+++VS+N+I+  Y ++     A   F 
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            +   GI     T  SL S  A +        +HG +++ G +  +  I NA++ MY++ 
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG-YKSNQCICNALISMYSRC 305

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I +A  VF  +  ++VISW ++ITG+A++G A+ A+E+F  M E     PN+ TYV++
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAV 364

Query: 455 LPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RS 512
           L A SHVG + +G K  ++   ++ +   +    C+VD+ G+ G + +AM     +P  +
Sbjct: 365 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMA 424

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
            ++ W  ++    +HG  +   +    +L++   PD
Sbjct: 425 DALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 458



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 212/439 (48%), Gaps = 28/439 (6%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANL---GDLSFSRHTFD 103
           +  +  +CT+L  +   K+LH+ ++  G    V     LV+ YA     G +  SR  F+
Sbjct: 54  YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 113

Query: 104 HISYRNVYTWNSMISVYVRCGRL-SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD- 161
            +   NV +W ++I+ Y + G    EA++ F +  ++  +RP+ ++F  VLKAC NL D 
Sbjct: 114 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDP 172

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G++++   +KLG      V  SL+ MY R G    ARK FD +  ++  S+NA++ GY
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 232

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            ++  + EA  + +E+   G+ +   T AS+L   A    +  G  IH  ++K G + N 
Sbjct: 233 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            + N LI+MY++ G +  A +VF++M +R+V+SW S+I  + +      A   F  M + 
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 352

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSR-------SVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           G +P+ +T V++ S  + +      +         HG + R   +         +VD+  
Sbjct: 353 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA-------CMVDLLG 405

Query: 393 KLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           + G++  A      +P+  D + W TL+     +G         +M+ E    +P    Y
Sbjct: 406 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDP--AAY 463

Query: 452 VSILPAYSHVGALRQGIKI 470
           + +   ++  G  +  +KI
Sbjct: 464 ILLSNLHASAGQWKDVVKI 482


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/628 (39%), Positives = 390/628 (62%), Gaps = 6/628 (0%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A K+FD MP R+  +W  MI+ + Q G A +A+D+  +M L G   D  T +S+L  C  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF---GMMRHALRVFDQMMERDVVSW 313
              +  G  +H  +++ GL  ++ V  +L++MYAK    G +  + +VF+QM E +V+SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 314 NSIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
            +II AY QS +    A   F  M    I+P+  +  S+      L+D      V+ + +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           + G    + + GN+++ MYA+ G +  A   F+ L  K+++S+N ++ GYA+N  + EA 
Sbjct: 189 KLGIASVNCV-GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  + +   I  +  T+ S+L   + +GA+ +G +IH R++K     +  +   L+ M
Sbjct: 248 LLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y +CG I+ A  +F ++   + + W ++I+    HG   +AL  F +ML+ G +P+ IT+
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           V++L+ACSH G++SEGQ++F+ M +E GI P ++HY CMVDL GR+G L  A  FI +MP
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           +  DA +W  LLGACR+HGN ELG  A++ + E + ++   Y+L+SN++A+ G+W+ V +
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           +R   ++R L K  G S IEV N+V  F+ G  +HP+  +IY EL  L +K+K +GY+PD
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 546

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
             FVL D+EE++KE  L  HSE++A+AFG+IS+    PI+IFKNLRVCGDCH   K+IS 
Sbjct: 547 TDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISM 606

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
            T REI+VRDSNRFHH K+G+CSC DYW
Sbjct: 607 ATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 244/456 (53%), Gaps = 14/456 (3%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
           FD +  RN+ TW  MI+ + + G   +A+D F    L SG  PD +T+  VL AC     
Sbjct: 13  FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL-SGYVPDRFTYSSVLSACTELGL 71

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRDSGSWNAM 215
           L  GK++H  V++LG   DV V  SL+ MY +    G  + +RK+F+ MP  +  SW A+
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 216 ISGYCQSGNA-VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           I+ Y QSG    EA+++  +M    +  +  + +S+L  C    +  +G  ++ Y VK G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           +     V N+LI+MYA+ G M  A + FD + E+++VS+N+I+  Y ++     A   F 
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            +   GI     T  SL S  A +        +HG +++ G +  +  I NA++ MY++ 
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGG-YKSNQCICNALISMYSRC 310

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I +A  VF  +  ++VISW ++ITG+A++G A+ A+E+F  M E     PN+ TYV++
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAV 369

Query: 455 LPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RS 512
           L A SHVG + +G K  ++   ++ +   +    C+VD+ G+ G + +AM     +P  +
Sbjct: 370 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMA 429

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
            ++ W  ++    +HG  +   +    +L++   PD
Sbjct: 430 DALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 463



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 212/439 (48%), Gaps = 28/439 (6%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANL---GDLSFSRHTFD 103
           +  +  +CT+L  +   K+LH+ ++  G    V     LV+ YA     G +  SR  F+
Sbjct: 59  YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 118

Query: 104 HISYRNVYTWNSMISVYVRCGRL-SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD- 161
            +   NV +W ++I+ Y + G    EA++ F +  ++  +RP+ ++F  VLKAC NL D 
Sbjct: 119 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDP 177

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G++++   +KLG      V  SL+ MY R G    ARK FD +  ++  S+NA++ GY
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 237

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            ++  + EA  + +E+   G+ +   T AS+L   A    +  G  IH  ++K G + N 
Sbjct: 238 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            + N LI+MY++ G +  A +VF++M +R+V+SW S+I  + +      A   F  M + 
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 357

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSR-------SVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           G +P+ +T V++ S  + +      +         HG + R   +         +VD+  
Sbjct: 358 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA-------CMVDLLG 410

Query: 393 KLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           + G++  A      +P+  D + W TL+     +G         +M+ E    +P    Y
Sbjct: 411 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDP--AAY 468

Query: 452 VSILPAYSHVGALRQGIKI 470
           + +   ++  G  +  +KI
Sbjct: 469 ILLSNLHASAGQWKDVVKI 487


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 279/763 (36%), Positives = 433/763 (56%), Gaps = 13/763 (1%)

Query: 64  KRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           ++LH L V  G  +  V + T LV+ Y   G +      F+ +  +NV TW S+++    
Sbjct: 119 EQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAH 178

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
               SE +  F++     G+ P+ +TF  VL A  +   L  G+++H   +K G    VF
Sbjct: 179 AQMHSEVMALFFRMR-AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVF 237

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SL++MY + GL   A+ +F+ M  RD  SWN +++G   +   +EAL +  E R   
Sbjct: 238 VCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATM 297

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             M   T A+++ +CA    +     +H  ++KHG      V   L + Y+K G +  AL
Sbjct: 298 GKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADAL 357

Query: 300 RVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +F      R+VVSW +II+   Q+ D   A   F+ M++  + P+  T  ++  + A L
Sbjct: 358 NIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM--LKASL 415

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +       +H  +++   +     +G A++  Y+K G    A ++F+ +  KDV++W+ +
Sbjct: 416 SIL--PPQIHAQVIKTN-YQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHARVIKN 477
           ++ +AQ G    A  +F  M     I PN+ T  S++ A +   A + QG + HA  IK 
Sbjct: 473 LSCHAQAGDCEGATYLFNKMA-IQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKY 531

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
                + V++ LV MY + G ID A  +F +      V WN++IS +  HG   KA+  F
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETF 591

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           RQM   G++ D +TF++++  C+H+GLV EGQ+YF  M  +  I P ++HY CMVDL+ R
Sbjct: 592 RQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSR 651

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG L    + I++MP    A +W  LLGACR+H N+ELG  ++D+L  ++  +   YVL+
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLL 711

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SNIYA  GKW+  DEVR L   R +KK  G S I++ NKV  F   +++HP  ++IY +L
Sbjct: 712 SNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
           + +  ++K  GY P+ SFVL D+ ED+KE +L +HSERLA+AFG+I++PP +P+QI KNL
Sbjct: 772 KVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNL 831

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVCGDCH   K +S I +REII+RD +RFHHF  G CSCGD+W
Sbjct: 832 RVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 166/605 (27%), Positives = 293/605 (48%), Gaps = 22/605 (3%)

Query: 92  LGDLSFSRHTFDHISYRNVYTW-NSMISVYVRCGRLSEAVDCFYQFTLT--SGLRPDFYT 148
           L D   +R+  D I  R+     N ++  Y R G + E +D   QF++    G+  D  T
Sbjct: 45  LRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLD---QFSVARRGGVLVDSAT 101

Query: 149 FPPVLKACRNLVD---GKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARKLFDDM 204
              VLKACR++ D   G+++HC  +K G +  +V    SL+ MY + G      ++F+ M
Sbjct: 102 LSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM 161

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P ++  +W ++++G   +    E + +   MR EG+  +P T AS+L   A    +  G 
Sbjct: 162 PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ 221

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H   VK G   ++FV N+L+NMYAK G++  A  VF+ M  RD+VSWN+++A  + + 
Sbjct: 222 RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNE 281

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             + A   F   +    +    T  ++  + A L     +R +H  +++ G+ +   ++ 
Sbjct: 282 CELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM- 340

Query: 385 NAVVDMYAKLGIINSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            A+ D Y+K G +  A  +F      ++V+SW  +I+G  QNG    A+ +F  M E + 
Sbjct: 341 TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE-DR 399

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN+ TY ++L A   +       +IHA+VIK       FV T L+  Y K G  +DA+
Sbjct: 400 VMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDAL 455

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           S+F  + +   V W+A++SCH   G  + A   F +M  +G++P+  T  S++ AC+   
Sbjct: 456 SIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPS 515

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
              +  R FH +  ++     +     +V ++ R G++  A    +    R D   W ++
Sbjct: 516 AGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDR-DLVSWNSM 574

Query: 624 LGACRIHGNMELGAVASDRLFE---VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           +     HG   + A+ + R  E   +  + V +  ++     N    EG     S+ RD 
Sbjct: 575 ISGYAQHG-YSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDH 633

Query: 681 GLKKT 685
            +  T
Sbjct: 634 KINPT 638


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/789 (35%), Positives = 437/789 (55%), Gaps = 25/789 (3%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  +  V+    +H L+V +  ++ VF S  LV+FY   G +S +   F  + 
Sbjct: 187 FPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMP 246

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS------GLRPDFYTFPPVLKAC---R 157
            RN+ +WNSMI V+   G LSE  +CF                PD  T   VL  C   R
Sbjct: 247 ERNLVSWNSMIRVFSDNG-LSE--ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDR 303

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
            +  GK +H   +KL  + +V V  +L+ MY + G  N A+ +F     ++  SWN M+ 
Sbjct: 304 EIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVG 363

Query: 218 GYCQSGNAVEALDILDEMRLEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           G+  +G+  +  D+L +M   G  +  D +T+ + +PVC     + +   +H Y +K   
Sbjct: 364 GFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQ-- 421

Query: 276 EF---NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
           EF   N  V+N  +  YAK G + +A RVF  +  + V SWN++I  Y QS+DP  +   
Sbjct: 422 EFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDA 481

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M+ +G+ PDL T+ SL S  +Q+   +  + VHG I+R      D  +  +++ +Y 
Sbjct: 482 YFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIR-NRLERDSFVYISLLSLYI 540

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
             G +++A  +F+ +  K ++SWNT++ GY QNG    A+ +F+ M     + P + + +
Sbjct: 541 HCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMV-LYGVQPCEISMM 599

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+  A S + +LR G + H   +K  L  + F+A  ++DMY K G + ++  +F  +   
Sbjct: 600 SVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKER 659

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
           S   WNA++  +GIHG+  +A+  F +M   G  PD +TF+ +LTAC+HSGLV EG  Y 
Sbjct: 660 SVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYL 719

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF-IQNMPVRPDASIWGALLGACRIHG 631
             M+  FG+ P LKHY C++D+  RAG L  A     + M   P   IW  LL +CRIH 
Sbjct: 720 DQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHK 779

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           N+E+G   + +LF  + E    YVL+SN+YA  GKW+ V +VR   ++  L+K  G S I
Sbjct: 780 NLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWI 839

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           E+N KV  F  G  +   +E+I      L  ++  +GY PD S V  D+ E+EK   L  
Sbjct: 840 ELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRG 899

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE+LAI +G+I +   + ++++KNLR+C DCHN  K IS++ EREI+VRD+ RFHHFK+
Sbjct: 900 HSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKN 959

Query: 812 GICSCGDYW 820
           G CSCGDYW
Sbjct: 960 GFCSCGDYW 968



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/592 (28%), Positives = 302/592 (51%), Gaps = 17/592 (2%)

Query: 64  KRLHALLVVSGKIKTV-FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +++H L+  S ++       T+++  Y+  G    SR  FD +  +N++ WN++IS Y R
Sbjct: 101 RKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSR 160

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
                  ++ F +    SGL PD +TFP V+KAC  + +   G  +H  V+K     DVF
Sbjct: 161 NELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVF 220

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
           V+ +L+  Y   G  + A ++F  MP R+  SWN+MI  +  +G + E   +L +M  + 
Sbjct: 221 VSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKD 280

Query: 239 ---GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
                + D  T+A++LPVCAR   I  G  +H   +K  L+  + V+N L++MY+K G +
Sbjct: 281 DEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCI 340

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG--IQPDLLTLVSLTS 353
             A  +F     ++VVSWN+++  +  + D          M   G  ++ D +T+++   
Sbjct: 341 NDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVP 400

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
           +  + +   N + +H + +++ +   + ++ NA V  YAK G ++ A  VF  +  K V 
Sbjct: 401 VCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVN 460

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SWN LI GY+Q+     +++ +  M+    + P+  T  S+L A S + +L+ G ++H  
Sbjct: 461 SWNALIGGYSQSSDPRLSLDAYFQMKSSGLL-PDLFTVCSLLSACSQIKSLKLGKEVHGL 519

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           +I+N L  D FV   L+ +Y  CG +  A  LF  +   + V WN +++ +  +G  ++A
Sbjct: 520 IIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERA 579

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L+ FRQM+  GV+P  I+ +S+  ACS    +  G R  H    +  ++ +      ++D
Sbjct: 580 LSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLG-REAHGYALKCLLEDNAFIACSVID 638

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           ++ + G +  +      +  R  AS W A++    IHG     A  + +LFE
Sbjct: 639 MYAKNGSVMESFKVFNGLKERSVAS-WNAMVMGYGIHGR----AKEAIKLFE 685



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 223/464 (48%), Gaps = 22/464 (4%)

Query: 162 GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+KIH  V +      D  +   ++ MY   G  + +R +FD +  ++   WNA+IS Y 
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159

Query: 221 QSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           ++      L++  +M  E G+  D  T   ++  CA    +  GL +H  +VK  L  ++
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-- 337
           FVSN L++ Y   G +  ALRVF  M ER++VSWNS+I  +  S++ ++   F    Q  
Sbjct: 220 FVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVF--SDNGLSEECFLLLGQMM 277

Query: 338 ----QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
               +    PD+ TL ++  + A+  +    + VHG  M+     ++V++ NA++DMY+K
Sbjct: 278 EKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLS-LDKEVVVNNALMDMYSK 336

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYV 452
            G IN A  +F+    K+V+SWNT++ G++  G   +  ++  QM+    ++  ++ T +
Sbjct: 337 CGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTIL 396

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           + +P       L    ++H   +K      +  VA   V  Y KCG +  A  +F  +  
Sbjct: 397 NAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRS 456

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
            +   WNA+I  +        +L+ + QM   G+ PD  T  SLL+ACS    +  G+  
Sbjct: 457 KTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEV 516

Query: 572 FHMMQEEFGIKPHLKH----YGCMVDLFGRAGHLGMAHNFIQNM 611
             ++     I+  L+     Y  ++ L+   G L  AH     M
Sbjct: 517 HGLI-----IRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAM 555



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 6/278 (2%)

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           D +  R +H  +        D ++   V+ MY+  G  + + +VF+ L  K++  WN +I
Sbjct: 96  DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y++N L    +E+F  M   + + P+  T+  ++ A + V  ++ G+ +H  V+K  L
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DVFV+  LV  YG  G + DA+ +F  +P  + V WN++I     +G  ++      Q
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275

Query: 540 MLDE----GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
           M+++       PD  T  ++L  C+    +  G +  H +  +  +   +     ++D++
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVG-KGVHGLAMKLSLDKEVVVNNALMDMY 334

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            + G +  A   I  +    +   W  ++G     G++
Sbjct: 335 SKCGCINDAQ-VIFKLNNNKNVVSWNTMVGGFSAAGDI 371


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/773 (36%), Positives = 412/773 (53%), Gaps = 86/773 (11%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V    + +  +   G +  +   F  +  R+  T+N+M++ Y   GRL +A+  F     
Sbjct: 107 VIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP- 165

Query: 139 TSGLRPDFYTFPPVLKA---------CRNLVDGKKIHCSV-------------------- 169
               RPD +++  +L A          R L D   +  SV                    
Sbjct: 166 ----RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARH 221

Query: 170 -LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
              L  E D      +L  Y R G    AR+LFD     D+ SWNA+++GY Q     EA
Sbjct: 222 YFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEA 281

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLIN 287
             + ++M       D ++  +++   AR  ++     L  +  ++     ++F    +++
Sbjct: 282 QKMFNKM----PQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIR-----DVFTWTAIVS 332

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
            YA+ GM+  A RVFD M +++ VSWN+++AAY Q      A   F  M           
Sbjct: 333 GYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMP---------- 382

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
                        CRN  S         W        N ++  YA+ G+++ A A+F  +
Sbjct: 383 -------------CRNVAS---------W--------NTMLTGYAQAGMLDEARAIFGMM 412

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P KD +SW  ++  Y+Q G + E +++F+ M  C E   N+  +  +L   + + AL  G
Sbjct: 413 PQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEW-VNRSAFACVLSTCADIAALECG 471

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
           +++H+R+IK       FV   L+ MY KCG +++A S F ++     V WN +I+ +  H
Sbjct: 472 MQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARH 531

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +AL  F  M     +PD IT V +L ACSHSGLV +G  YF+ M  +FG+    +H
Sbjct: 532 GFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEH 591

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y CM+DL GRAG L  A N +++MP  PD+++WGALLGA RIH N ELG  A++++FE++
Sbjct: 592 YTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELE 651

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            EN G YVL+SNIYA+ GKW  VD++R +  +RG+KK PG+S IEV NKV  F  G+  H
Sbjct: 652 PENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVH 711

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ E IY  L +L  +MK  GYV     VL DVEE+EKEH+L  HSE+LA+A+GI+  PP
Sbjct: 712 PEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPP 771

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             PI++ KNLRVC DCH   K IS I  R II+RDSNRFHHF+DG CSCGDYW
Sbjct: 772 GRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 258/555 (46%), Gaps = 47/555 (8%)

Query: 46  REIDFDDLFQSCTKLHHVKRLHALLVVSG-----KIKTVFSSTKLVNFYANLGDLSFSRH 100
           R I   D F   T LH +    +L  V        +K   S   +++ +AN G +S +RH
Sbjct: 162 RSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARH 221

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD    ++  +WN M++ YVR GR+ EA + F   T    +  +      V ++   + 
Sbjct: 222 YFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRS--QIE 279

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           + +K+   + +     DV    +++  Y R G    AR+LFD  P+RD  +W A++SGY 
Sbjct: 280 EAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYA 335

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF--- 277
           Q+G   EA  + D M  +                A S N +    +   +++   E    
Sbjct: 336 QNGMLEEAKRVFDAMPDKN---------------AVSWNAMMAAYVQRRMMEEAKELFDA 380

Query: 278 ----NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
               N+   N ++  YA+ GM+  A  +F  M ++D VSW +++AAY Q          F
Sbjct: 381 MPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLF 440

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M + G   +      + S  A +        +H  +++ G+ +    +GNA++ MY K
Sbjct: 441 KEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV-GCFVGNALLAMYFK 499

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G +  A + FE +  +DV+SWNT+I GYA++G   EA+EVF  M + +   P+  T V 
Sbjct: 500 CGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTS-TKPDDITLVG 558

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQV 509
           +L A SH G + +GI     + ++   F V       TC++D+ G+ GR+D+A++L   +
Sbjct: 559 VLAACSHSGLVEKGISYFYSMHRD---FGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM 615

Query: 510 P-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC-SHSGLVSE 567
           P    S  W A++    IH   +   N   ++ +  + P++     LL+   + SG   +
Sbjct: 616 PFEPDSTMWGALLGASRIHRNSELGRNAAEKIFE--LEPENAGMYVLLSNIYASSGKWRD 673

Query: 568 GQRYFHMMQEEFGIK 582
             +  H+M E  G+K
Sbjct: 674 VDKMRHIMHER-GVK 687



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 198/476 (41%), Gaps = 83/476 (17%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S   ++  Y   G +  +R  FD  +  +  +WN++++ YV+  ++ EA   F + 
Sbjct: 229 KDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKM 288

Query: 137 ---------TLTSG---------------LRP--DFYTFPPVLKACRN---LVDGKKIHC 167
                    T+ SG               + P  D +T+  ++        L + K++  
Sbjct: 289 PQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFD 348

Query: 168 SVL-KLGFEWDVFVAA--------------------------SLLHMYCRFGLANVARKL 200
           ++  K    W+  +AA                          ++L  Y + G+ + AR +
Sbjct: 349 AMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAI 408

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  MP +D+ SW AM++ Y Q G + E L +  EM   G  ++    A +L  CA    +
Sbjct: 409 FGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAAL 468

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G+ +H  ++K G     FV N L+ MY K G M  A   F++M ERDVVSWN++IA Y
Sbjct: 469 ECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGY 528

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            +      A   F TM++   +PD +TLV +      L  C +S  V   I        D
Sbjct: 529 ARHGFGKEALEVFDTMRKTSTKPDDITLVGV------LAACSHSGLVEKGISYFYSMHRD 582

Query: 381 VIIGNA------VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASE 430
             +         ++D+  + G ++ A  + + +P + D   W  L+     +  + L   
Sbjct: 583 FGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRN 642

Query: 431 AIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK----IHARVIKNCLCF 481
           A E +F++  E      N G YV +   Y+  G  R   K    +H R +K    F
Sbjct: 643 AAEKIFELEPE------NAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGF 692



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 124/282 (43%), Gaps = 27/282 (9%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           +VI  N  +  + + G +  A  +F  +P +   ++NT++ GYA NG   +A+  F+ + 
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGR 498
                 P+  +Y ++L A     +L     +   + +K+ + ++V +++     +   G 
Sbjct: 166 -----RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISS-----HANHGL 215

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +  A   F   P   +V WN +++ +  +G+  +A    R++ D     D I++ +L+  
Sbjct: 216 VSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEA----RELFDSRTEWDAISWNALMAG 271

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
                 + E Q+ F+ M +       +  +  MV  + R G +  A       P+R D  
Sbjct: 272 YVQRSQIEEAQKMFNKMPQR-----DVVSWNTMVSGYARRGDMAEARRLFDVAPIR-DVF 325

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEV--DSENVGYYVLMS 658
            W A++     +G +E     + R+F+   D   V +  +M+
Sbjct: 326 TWTAIVSGYAQNGMLE----EAKRVFDAMPDKNAVSWNAMMA 363


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/763 (35%), Positives = 427/763 (55%), Gaps = 36/763 (4%)

Query: 85  LVNFYANLGDLSFSRHTFDHI---SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           L++ Y+  G L  ++  FD +   S R+V TWN+MIS ++R G   EA+  F        
Sbjct: 182 LISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGA 241

Query: 142 LRPDFYTFPPVLKAC-----RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
             P+  TF  VL +C      +L D + IH  ++  G E + FV  +L+  Y + G  + 
Sbjct: 242 PPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDD 301

Query: 197 ARKLF----DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           A ++F    D+ P     + +AMIS   Q+G   E+L +   M LEG     +T+ S+L 
Sbjct: 302 AWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLN 361

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNN-----LINMYAKFGMMRHALRVFDQMME 307
            C    ++L       ++++  +E      +N     L+  YA+   +  A   FD +  
Sbjct: 362 AC----SMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQS 417

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNS-- 364
            DVVSWN++ AAY Q +    A   F  M   G++P + T ++ LT+  A      ++  
Sbjct: 418 PDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIG 477

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL-PVK-DVISWNTLITGY 422
           + +   +   G    D  + NA ++MYAK G +  A AVFE + P + D I+WN+++  Y
Sbjct: 478 KRIQSLLEEAG-LEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAY 536

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
             +GL  EA E+FQ ME    + PN+ T+V++L A +   ++ QG +IHARV+ N    D
Sbjct: 537 GHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESD 596

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-----VPWNAIISCHGIHGQGDKALNFF 537
             +   L++MY KCG +DDA ++F    +SSS     + W ++I+ +  +GQ ++AL  F
Sbjct: 597 TVIQNALLNMYAKCGSLDDAQAIF---DKSSSNQEDVIAWTSLIAGYAQYGQAERALKLF 653

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
             M  +GVRP+H+TF+S LTAC+H G + +G      M  + GI P  KH+ C+VDL GR
Sbjct: 654 WTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGR 713

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
            G L  A   ++    + D   W ALL AC+    +E G   ++R+ ++D E    Y+++
Sbjct: 714 CGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVL 772

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           +++YA  G+W     +R    D+G++  PG S++EVN ++  F  G+++HPK E+IY EL
Sbjct: 773 ASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLEL 832

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L   +K+ GYV D   VL DV ++ KE +L  HSE+LAIAFG++S+P  SP+++ KNL
Sbjct: 833 ERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNL 892

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCH  TK IS++T R+I++RDS+R+HHF  G CSCGDYW
Sbjct: 893 RVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 241/509 (47%), Gaps = 38/509 (7%)

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVL--KLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
           T+  +L+AC   R L  G+++H  +L  ++      F+A+ L+ M+ + G    A  L D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
                   S  AMI  + + G   +A+++ D M    V  +   + +++  C+   N+ +
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALVNACSCLGNLAA 159

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM---MERDVVSWNSIIAA 319
           G  IH  I     E N  + N LI+MY+K G +  A + FD++    +RDVV+WN++I+A
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219

Query: 320 YEQSNDPITAHGFFTTMQQAGI-QPDLLTLVSL--TSIVAQLNDCRNSRSVHGFIMRRGW 376
           + ++     A   F  M + G   P+ +T VS+  + + A L    + R++HG I+  G 
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG- 278

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVF----EGLPVKDVISWNTLITGYAQNGLASEAI 432
              +  +  A+VD Y KLG ++ A  VF    +  P   +++ + +I+   QNG   E++
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESL 338

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYS--HVGA-----LRQGIKIHARVIKNCLCFDVFV 485
            +F  M       P+  T VS+L A S   VG+     L Q +++ +    N L      
Sbjct: 339 RLFFAM-NLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVL------ 391

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            T L+  Y +   +  A + F  +     V WNA+ + +  H +  +AL  F +ML EGV
Sbjct: 392 GTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGV 451

Query: 546 RPDHITFVSLLTACSH--SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           RP   TF++ LTAC+       S   +    + EE G++         ++++ + G L  
Sbjct: 452 RPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511

Query: 604 AHNFIQNM-PVRPDASIWGALLGACRIHG 631
           A    + + P R D   W ++L A   HG
Sbjct: 512 ARAVFERISPARRDCITWNSMLAAYGHHG 540



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 16/186 (8%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS--YRN 109
           D   S T +   + +HA +V +G          L+N YA  G L  ++  FD  S    +
Sbjct: 570 DASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQED 629

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH--C 167
           V  W S+I+ Y + G+   A+  F+      G+RP+  TF   L AC +   G K+   C
Sbjct: 630 VIAWTSLIAGYAQYGQAERALKLFWTMQ-QQGVRPNHVTFISALTACNH---GGKLEQGC 685

Query: 168 SVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            +L  G   D  +  +  H  C      R G  + A KL +     D  +W A++   C+
Sbjct: 686 ELLS-GMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDA-CK 743

Query: 222 SGNAVE 227
           +   +E
Sbjct: 744 NSKELE 749


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 279/763 (36%), Positives = 433/763 (56%), Gaps = 13/763 (1%)

Query: 64  KRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           ++LH L V  G  +  V + T LV+ Y   G +      F+ +  +NV TW S+++    
Sbjct: 119 EQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAH 178

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
               SE +  F++     G+ P+ +TF  VL A  +   L  G+++H   +K G    VF
Sbjct: 179 AQMHSEVMALFFRMR-AEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVF 237

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SL++MY + GL   A+ +F+ M  RD  SWN +++G   +   +EAL +  E R   
Sbjct: 238 VCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATM 297

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             M   T A+++ +CA    +     +H  ++KHG      V   L + Y+K G +  AL
Sbjct: 298 GKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADAL 357

Query: 300 RVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +F      R+VVSW +II+   Q+ D   A   F+ M++  + P+  T  ++  + A L
Sbjct: 358 NIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM--LKASL 415

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +       +H  +++   +     +G A++  Y+K G    A ++F+ +  KDV++W+ +
Sbjct: 416 SIL--PPQIHAQVIKTN-YQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHARVIKN 477
           ++ +AQ G    A  +F  M     I PN+ T  S++ A +   A + QG + HA  IK 
Sbjct: 473 LSCHAQAGDCEGATYLFNKMA-IQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKY 531

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
                + V++ LV MY + G ID A  +F +      V WN++IS +  HG   KA+  F
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETF 591

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           RQM   G++ D +TF++++  C+H+GLV EGQ+YF  M  +  I P ++HY CMVDL+ R
Sbjct: 592 RQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSR 651

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG L    + I++MP    A +W  LLGACR+H N+ELG  ++D+L  ++  +   YVL+
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLL 711

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SNIYA  GKW+  DEVR L   R +KK  G S I++ NKV  F   +++HP  ++IY +L
Sbjct: 712 SNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
           + +  ++K  GY P+ SFVL D+ ED+KE +L +HSERLA+AFG+I++PP +P+QI KNL
Sbjct: 772 KVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNL 831

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVCGDCH   K +S I +REII+RD +RFHHF  G CSCGD+W
Sbjct: 832 RVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 292/605 (48%), Gaps = 22/605 (3%)

Query: 92  LGDLSFSRHTFDHISYRNVYTW-NSMISVYVRCGRLSEAVDCFYQFTLT--SGLRPDFYT 148
           L D   +R+  D I  R+     N ++  Y R G + E +D   QF++    G+  D  T
Sbjct: 45  LRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLD---QFSVARRGGVLVDSAT 101

Query: 149 FPPVLKACRNLVD---GKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARKLFDDM 204
              VLKACR++ D   G+++HC  +K G +  +V    SL+ MY + G      ++F+ M
Sbjct: 102 LSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM 161

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P ++  +W ++++G   +    E + +   MR EG+  +P T AS+L   A    +  G 
Sbjct: 162 PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQ 221

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H   VK G   ++FV N+L+NMYAK G++  A  VF+ M  RD+VSWN+++A  + + 
Sbjct: 222 RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNE 281

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             + A   F   +    +    T  ++  + A L     +R +H  +++ G+ +   ++ 
Sbjct: 282 CELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM- 340

Query: 385 NAVVDMYAKLGIINSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            A+ D Y+K G +  A  +F      ++V+SW  +I+G  QNG    A+ +F  M E + 
Sbjct: 341 TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE-DR 399

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN+ TY ++L A   +       +IHA+VIK        V T L+  Y K G  +DA+
Sbjct: 400 VMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDAL 455

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           S+F  + +   V W+A++SCH   G  + A   F +M  +G++P+  T  S++ AC+   
Sbjct: 456 SIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPS 515

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
              +  R FH +  ++     +     +V ++ R G++  A    +    R D   W ++
Sbjct: 516 AGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDR-DLVSWNSM 574

Query: 624 LGACRIHGNMELGAVASDRLFE---VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           +     HG   + A+ + R  E   +  + V +  ++     N    EG     S+ RD 
Sbjct: 575 ISGYAQHG-YSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDH 633

Query: 681 GLKKT 685
            +  T
Sbjct: 634 KINPT 638


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/674 (39%), Positives = 405/674 (60%), Gaps = 8/674 (1%)

Query: 153 LKACRNLVD---GKKIHCS-VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           L++C    D   G+ +H   VL        F+A  L+ MY        A +LFD MP  +
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW  ++SG  Q+    +AL     M   G+      ++S     A      +G  +H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             V+ G +  LFV++NL +MY+K G++  A RVFDQM ++D V+W ++I  Y ++ +   
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 329 AHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
           A   F  M++ G +  D   L S+ S    L D   +R++H  +M+ G F ++V + NA+
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSG-FEQEVAVRNAL 262

Query: 388 VDMYAKLGIINSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
            DMYAK   +++A  V +      +V+S  +LI GY +     +A+ +F  +     + P
Sbjct: 263 TDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRR-QGVEP 321

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+ T+ S++   +    L QG ++HA VIK  L  D FV++ L+DMYGKCG I  ++ LF
Sbjct: 322 NEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLF 381

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            ++   + + WNA I+    HG G +A+  F +M   G+RP+HITFVSLLTACSH+GLV 
Sbjct: 382 KEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVD 441

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG +YF+ M++  GI+P  +HY C++D++GRAG L  A  FI  MPV+P+A  W +LLGA
Sbjct: 442 EGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGA 501

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR+ GN ELG +A+D + +++ +N G +V +S IYA++G+WE V  VR L RD  +KK P
Sbjct: 502 CRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLP 561

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G+S ++ N K  +F + + +HP+ EKIY++L  L  ++K  GYVPD  F+  ++E+  K+
Sbjct: 562 GFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQ 621

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
            IL  HSER+A+AF +IS P   PI + KNLR+C DCH+  KFIS++  R+IIVRD++RF
Sbjct: 622 RILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRF 681

Query: 807 HHFKDGICSCGDYW 820
           HHF  G CSCGDYW
Sbjct: 682 HHFVKGGCSCGDYW 695



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 243/490 (49%), Gaps = 16/490 (3%)

Query: 54  FQSCTK---LHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
            QSC +   L   + LHA LV+SG    + F +  L+  Y++  D+  +   FD +   N
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY---TFPPVLKACRNLVDGKKIH 166
           + +W +++S   +     +A+  F      +GL P  +   +      A      G ++H
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMC-RAGLVPTQFALSSAARAAAALAARHAGAQLH 142

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
           C  ++LGF+ ++FVA++L  MY + GL   A ++FD MP +D+ +W AMI GY ++GN  
Sbjct: 143 CVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLE 202

Query: 227 EALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            A+    +MR EG V  D   + S+L       +      IH  ++K G E  + V N L
Sbjct: 203 AAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNAL 262

Query: 286 INMYAKFGMMRHALRV--FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            +MYAK   M +A RV   DQ    +VVS  S+I  Y +++    A   F  +++ G++P
Sbjct: 263 TDMYAKAADMDNAARVVKIDQ-GSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEP 321

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           +  T  S+    A          +H  +++    + D  + + ++DMY K G+I+ +  +
Sbjct: 322 NEFTFSSMIKGCAMQALLEQGAQLHAEVIKTS-LISDSFVSSTLLDMYGKCGLISLSIQL 380

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +     I+WN  I   AQ+G   EAI  F  M     I PN  T+VS+L A SH G 
Sbjct: 381 FKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSG-IRPNHITFVSLLTACSHAGL 439

Query: 464 LRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
           + +G+K  ++    + +       +C++DMYG+ GR+D+A     ++P + ++  W +++
Sbjct: 440 VDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499

Query: 522 SCHGIHGQGD 531
               + G  +
Sbjct: 500 GACRMRGNKE 509



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 188/412 (45%), Gaps = 25/412 (6%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH + V  G    +F ++ L + Y+  G L  +   FD +  ++   W +MI  Y + G
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVA 181
            L  AV  F        +  D +    VL A   L DG   + IH  V+K GFE +V V 
Sbjct: 200 NLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVR 259

Query: 182 ASLLHMYCRFG-LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +L  MY +   + N AR +  D    +  S  ++I GY ++    +AL +  E+R +GV
Sbjct: 260 NALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGV 319

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +  T +S++  CA    +  G  +H  ++K  L  + FVS+ L++MY K G++  +++
Sbjct: 320 EPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQ 379

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ--- 357
           +F ++     ++WN+ I    Q      A   F  M  +GI+P+ +T VSL +  +    
Sbjct: 380 LFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGL 439

Query: 358 ----LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DV 412
               L    + +  HG   +   +       + ++DMY + G ++ A      +PVK + 
Sbjct: 440 VDEGLKYFYSMKDHHGIEPKGEHY-------SCIIDMYGRAGRLDEAEKFIGEMPVKPNA 492

Query: 413 ISWNTLITGYAQNGLASEA-IEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
             W +L+      G      I    MM    ++ P N G +VS+   Y+ +G
Sbjct: 493 YGWCSLLGACRMRGNKELGEIAADNMM----KLEPDNTGVHVSLSGIYASLG 540



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 7/267 (2%)

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           L L +      +  D R  R +H  ++  G       + N ++ MY+    + SA  +F+
Sbjct: 18  LRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFD 77

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P  +++SW TL++G  QN +  +A+  F  M     + P Q    S   A + + A  
Sbjct: 78  AMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLV-PTQFALSSAARAAAALAARH 136

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G ++H   ++     ++FVA+ L DMY K G + +A  +F Q+P+  +V W A+I  + 
Sbjct: 137 AGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYA 196

Query: 526 IHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEG--QRYFHMMQEEFGIK 582
            +G  + A+  FR M  EG V  D     S+L+A   SG + +G   R  H    + G +
Sbjct: 197 KNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA---SGGLKDGWLARAIHSCVMKSGFE 253

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
             +     + D++ +A  +  A   ++
Sbjct: 254 QEVAVRNALTDMYAKAADMDNAARVVK 280



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 22/210 (10%)

Query: 36  ISPDCLEN-------------ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTV 79
           I  DC+E              E  E  F  + + C     L    +LHA ++ +  I   
Sbjct: 299 IETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDS 358

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F S+ L++ Y   G +S S   F  I Y     WN+ I+V  + G   EA+  F + T +
Sbjct: 359 FVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMT-S 417

Query: 140 SGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK--LGFEWDVFVAASLLHMYCRFGLAN 195
           SG+RP+  TF  +L AC +  LVD    +   +K   G E      + ++ MY R G  +
Sbjct: 418 SGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLD 477

Query: 196 VARKLFDDMPVRDSG-SWNAMISGYCQSGN 224
            A K   +MPV+ +   W +++      GN
Sbjct: 478 EAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/733 (36%), Positives = 402/733 (54%), Gaps = 72/733 (9%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L   ++ H  +LK G   D  +A  LL  Y        A  + D +P  +  S++ +I 
Sbjct: 28  SLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIY 87

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            + +      AL    +M   G+  D   + S +  CA    +     +H      G + 
Sbjct: 88  AFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDS 147

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           + FV ++L++MY K   +R A RVFD+M E DVVSW++++AAY +      A   F+ M 
Sbjct: 148 DSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMG 207

Query: 338 QAGIQPDLL-----------------------------------TLVSLTSIVAQLNDCR 362
            +G+QP+L+                                   T+ S+   V  L D  
Sbjct: 208 DSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLV 267

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL--------------- 407
               +HG+++++G  + D  + +A++DMY K    +    VF+ +               
Sbjct: 268 MGILIHGYVIKQG-LVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGL 326

Query: 408 --------------PVKD------VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
                          +KD      V+SW ++I   +QNG   EA+E+F+ M+    + PN
Sbjct: 327 SRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAG-VKPN 385

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T   +LPA  ++ AL  G   H   ++  +  DV+V + L+DMY KCGRI  +   F 
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
            +P  + V WNA+I+ + +HG+  +A+  F  M   G +PD I+F  +L+ACS SGL  E
Sbjct: 446 GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEE 505

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G  YF+ M  ++GI+  ++HY CMV L  RAG L  A+  I+ MPV PDA +WGALL +C
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           R+H N+ LG VA+++LFE++  N G Y+L+SNIYA+ G W  V+ VR + +++GL+K PG
Sbjct: 566 RVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPG 625

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
            S IEV NKV +   G+++HP+  +I ++L  L+ +MK LGY P+ +FVLQDVEE +KE 
Sbjct: 626 CSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQ 685

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           IL  HSE+LA+ FG++++PP  P+Q+ KNLR+CGDCH   KFIS    REI VRD+NRFH
Sbjct: 686 ILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFH 745

Query: 808 HFKDGICSCGDYW 820
           HFK+G CSCGDYW
Sbjct: 746 HFKEGACSCGDYW 758


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 280/731 (38%), Positives = 389/731 (53%), Gaps = 94/731 (12%)

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD----FYTF 149
           +L  +R  FD +  R+V +WN+M+S Y + G + EA + F +    + +  +     Y  
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQ 104

Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
              ++  R L + K           +W++     ++  Y +      AR +FD MP RD 
Sbjct: 105 NGRIEDARRLFESKA----------DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 154

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SWN MISGY Q+G  +EA  + +E         P+                        
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEE--------SPVR----------------------- 183

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
                   ++F    +++ Y + GM+  A RVFD M E++ VSWN+IIA Y Q      A
Sbjct: 184 --------DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQA 235

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M                        C+N  S         W        N ++ 
Sbjct: 236 RELFEAMP-----------------------CQNVSS---------W--------NTMIT 255

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
            YA+ G I  A   F+ +P +D ISW  +I GYAQ+G   EA+ +F  M+   E   N+ 
Sbjct: 256 GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE-RLNRS 314

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+ S L   + + AL  G ++H RV+K  L    +V   L+ MY KCG IDDA  +F  +
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
                V WN +I+ +  HG G +AL  F  M   G+ PD +T V +L+ACSH+GLV +G 
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            YF+ M +++GI  + KHY CM+DL GRAG L  A N ++NMP  PDA+ WGALLGA RI
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
           HGN ELG  A+  +FE++ +N G YVL+SN+YA  G+W  V  +R   RDRG+KK PG+S
Sbjct: 495 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
            +EV NK+  F  G+  HP+ ++IY  L  L  KMK  GYV     VL DVEE+EK H+L
Sbjct: 555 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 614

Query: 750 TSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
             HSE+LA+AFGI++ P   PI++ KNLRVC DCHN  K IS+I  R II+RDS+RFHHF
Sbjct: 615 KYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHF 674

Query: 810 KDGICSCGDYW 820
             G CSCGDYW
Sbjct: 675 NGGQCSCGDYW 685



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 158/532 (29%), Positives = 258/532 (48%), Gaps = 37/532 (6%)

Query: 37  SPDCLENESREIDFDDL--FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           SP    + S E DF +    + C +  ++ R   LL      + V S   +++ YA  G 
Sbjct: 18  SPPLQLHASPEFDFLERHDLRGCVRYRNL-RAARLLFDQMPERDVVSWNAMLSGYAQNGY 76

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +  ++  FD +  +N  +WN M++ YV+ GR+ +A   F      S    +  ++  ++ 
Sbjct: 77  VKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF-----ESKADWELISWNCMMG 131

Query: 155 AC--RN-LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
               RN LVD + I   +     E D     +++  Y + G    A++LF++ PVRD  +
Sbjct: 132 GYVKRNRLVDARGIFDRMP----ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFT 187

Query: 212 WNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           W AM+SGY Q+G   EA  + D M     VS + I    +   C R D      L     
Sbjct: 188 WTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQ--CKRMDQARE--LFEAMP 243

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
            +     N+   N +I  YA+ G +  A   FD+M +RD +SW +IIA Y QS     A 
Sbjct: 244 CQ-----NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEAL 298

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M++ G + +  T  S  S  A++      + VHG +++ G       +GNA++ M
Sbjct: 299 HLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAG-LESGCYVGNALLVM 357

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           Y K G I+ A  VFEG+  K+V+SWNT+I GYA++G   EA+ +F+ M++   I P+  T
Sbjct: 358 YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG-ILPDDVT 416

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
            V +L A SH G + +G +    + ++  +  +    TC++D+ G+ GR+DDA +L   +
Sbjct: 417 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 476

Query: 510 P-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLT 557
           P    +  W A++    IHG    G+KA     +M      PD+     LL+
Sbjct: 477 PFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM-----EPDNSGMYVLLS 523



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 178/389 (45%), Gaps = 42/389 (10%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++ VF+ T +V+ Y   G L  +R  FD +  +N  +WN++I+ YV+C R+ +A      
Sbjct: 182 VRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQA------ 235

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                  R  F   P     C+N+                W+  +       Y + G   
Sbjct: 236 -------RELFEAMP-----CQNVSS--------------WNTMITG-----YAQNGDIA 264

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR  FD MP RDS SW A+I+GY QSG   EAL +  EM+ +G  ++  T  S L  CA
Sbjct: 265 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 324

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  +H  +VK GLE   +V N L+ MY K G +  A  VF+ + E++VVSWN+
Sbjct: 325 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 384

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +IA Y +      A   F +M++ GI PD +T+V + S  +              + +  
Sbjct: 385 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 444

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEV 434
               +      ++D+  + G ++ A  + + +P + D  +W  L+     +G      + 
Sbjct: 445 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 504

Query: 435 FQMMEECNEINP-NQGTYVSILPAYSHVG 462
            +M+    E+ P N G YV +   Y+  G
Sbjct: 505 AKMI---FEMEPDNSGMYVLLSNLYAASG 530



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 42/322 (13%)

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS------------ 323
           EF+ F+  + +    ++  +R A  +FDQM ERDVVSWN++++ Y Q+            
Sbjct: 28  EFD-FLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 86

Query: 324 ---NDPITAHGFFTTMQQAGIQPD------------LLTLVSLTSIVAQLNDCRNSRSVH 368
               + I+ +G      Q G   D            L++   +     + N   ++R + 
Sbjct: 87  MPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIF 146

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             +  R     D +  N ++  YA+ G +  A  +FE  PV+DV +W  +++GY QNG+ 
Sbjct: 147 DRMPER-----DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGML 201

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            EA  VF  M E N ++ N     +I+  Y     + Q  ++     +   C +V     
Sbjct: 202 DEARRVFDGMPEKNSVSWN-----AIIAGYVQCKRMDQAREL----FEAMPCQNVSSWNT 252

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           ++  Y + G I  A + F ++P+  S+ W AII+ +   G G++AL+ F +M  +G R +
Sbjct: 253 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 312

Query: 549 HITFVSLLTACSHSGLVSEGQR 570
             TF S L+ C+    +  G++
Sbjct: 313 RSTFTSTLSTCAEIAALELGKQ 334


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 280/769 (36%), Positives = 432/769 (56%), Gaps = 22/769 (2%)

Query: 12  RLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHA 68
           + C++  L  A + L  +  + L+++  C            + Q C +L  +   KR+H+
Sbjct: 33  KFCEMGDLRNAMKLLSRSQRSELELNTYC-----------SVLQLCAELKSLEDGKRVHS 81

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
           ++  +G         KLV  Y N GDL   R  FD I    ++ WN ++S Y + G   E
Sbjct: 82  IISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRE 141

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
           +V  F +     G+R D YTF  VLK   A   + + K++H  VLKLGF     V  SL+
Sbjct: 142 SVGLFEKMQ-ELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLI 200

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
             Y + G    AR LFD++  RD  SWN+MISG   +G +   L+   +M   GV +D  
Sbjct: 201 AAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSA 260

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T+ ++L  CA   N+  G  +H Y VK G    +  +N L++MY+K G +  A  VF +M
Sbjct: 261 TLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKM 320

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            E  +VSW SIIAA+ +      A G F  MQ  G++PD+  + S+    A  N     R
Sbjct: 321 GETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGR 380

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VH  I ++     ++ + NA+++MYAK G +  A  +F  LPVK+++SWNT+I GY+QN
Sbjct: 381 EVHNHI-KKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQN 439

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
            L +EA+++F  M++  ++ P+  T   +LPA + + AL +G +IH  +++     D+ V
Sbjct: 440 SLPNEALQLFLDMQK--QLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHV 497

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
           A  LVDMY KCG +  A  LF  +P+   + W  +I+ +G+HG G +A++ F +M   G+
Sbjct: 498 ACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGI 557

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            P+  +F S+L AC+HSGL+ EG + F  M+ E  I+P L+HY CMVDL  R+G+L  A+
Sbjct: 558 EPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAY 617

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
            FI+ MP++PDA+IWGALL  CRIH ++EL    ++ +FE++ EN  YYVL++N+YA   
Sbjct: 618 KFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAE 677

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           KWE V +++      GLK   G S IEV  K +IF+ G+ +HP+ + I   LR LT KM 
Sbjct: 678 KWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMN 737

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             GY     + L + ++  KE +L +HSE+LA+   + ++P    +  F
Sbjct: 738 RGGYSNKIKYALINADDRLKEVLLCAHSEKLAM-LQVDATPHTKKVTCF 785


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/666 (38%), Positives = 399/666 (59%), Gaps = 8/666 (1%)

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G ++H + + +GF +D+ +   L+ MY +    ++A  +FD M  R+  SW A++ GY 
Sbjct: 22  QGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYL 81

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q GNA  +L +L EM   GV  +  T ++ L  C     + +G+ IH   VK G E+   
Sbjct: 82  QEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSV 141

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V N  I+MY+K G +  A +VF++M  R++VSWN++IA +    +   +   F  MQ  G
Sbjct: 142 VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQG 201

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINS 399
             PD  T  S       L   R    +H  ++ RG+ +    II +A+VD+YAK G +  
Sbjct: 202 EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFE 261

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL-PAY 458
           A  VF+ +  K++ISW+ LI G+AQ G   EA+++F+ + E   ++   G  +SI+   +
Sbjct: 262 AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRE--SVSNVDGFVLSIMMGVF 319

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +  + QG ++H  ++K     D+ VA  ++DMY KCG  ++A  LF ++   + V W 
Sbjct: 320 ADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWT 379

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +I+ +G HG G+KA++ F +M  +G+  D + +++LL+ACSHSGL+ E Q YF  +   
Sbjct: 380 VMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNN 439

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
             +KP+++HY CMVD+ GRAG L  A N I+NM ++P+  IW  LL ACR+HGN+E+G  
Sbjct: 440 HQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGRE 499

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
             + LF +D++N   YV+MSNIYA  G W+  + VR L + +GLKK  G S +E+N ++ 
Sbjct: 500 VGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIH 559

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
            FY G+ THP  EKI++ L+ +  ++K  +GY     F L DVEE+ KE  L  HSE+LA
Sbjct: 560 FFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLA 619

Query: 758 IAFGIISSPPKSP---IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           I   ++    +     I++FKNLRVCGDCH + K +S+I ++  +VRD+NRFH F+DG+C
Sbjct: 620 IGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLC 679

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 680 SCGDYW 685



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 255/486 (52%), Gaps = 13/486 (2%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L ++C+K        ++HA  V  G    +  +  L++ Y     +  +   FD +  RN
Sbjct: 10  LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIH 166
           V +W +++  Y++ G    ++    +    SG++P+ +TF   LKAC  L    +G +IH
Sbjct: 70  VVSWTALMCGYLQEGNAKGSLALLCEMGY-SGVKPNEFTFSTSLKACGALGVVENGMQIH 128

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K GFEW   V  + + MY + G   +A ++F+ MP R+  SWNAMI+G+   GN  
Sbjct: 129 GMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGR 188

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL--FVSNN 284
           ++L +   M+ +G   D  T  S L  C     I  G  IH  ++  G   ++   +++ 
Sbjct: 189 KSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASA 248

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           ++++YAK G +  A +VFD++ +++++SW+++I  + Q  + + A   F  ++++    D
Sbjct: 249 IVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVD 308

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
              L  +  + A L      + +H +I++    + D+ + N+++DMY K G+   A  +F
Sbjct: 309 GFVLSIMMGVFADLALVEQGKQMHCYILKVPSGL-DISVANSIIDMYLKCGLTEEAERLF 367

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             + V++V+SW  +ITGY ++GL  +AI +F  M + + I  ++  Y+++L A SH G +
Sbjct: 368 SEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRM-QLDGIELDEVAYLALLSACSHSGLI 426

Query: 465 RQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
           R+  +  +R+  N  +  ++    C+VD+ G+ G++ +A +L   +  + +   W  ++S
Sbjct: 427 RESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLS 486

Query: 523 CHGIHG 528
              +HG
Sbjct: 487 ACRVHG 492



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 211/417 (50%), Gaps = 10/417 (2%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A +L  C+++     GL +H   V  G  F+L ++N+LI+MY K   +  A  VFD+M+
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ER+VVSW +++  Y Q  +   +      M  +G++P+  T  +       L    N   
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG  ++ G F    ++GNA +DMY+K G I  A  VF  +P ++++SWN +I G+   G
Sbjct: 127 IHGMCVKSG-FEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEG 185

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV--F 484
              +++ +FQ M+   E+ P++ T+ S L A   +GA+R G +IHA +I       +   
Sbjct: 186 NGRKSLVLFQRMQGQGEV-PDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           +A+ +VD+Y KCG + +A  +F ++ + + + W+A+I      G   +A++ FRQ+ +  
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESV 304

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
              D      ++   +   LV +G Q + ++++   G+   + +   ++D++ + G    
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVAN--SIIDMYLKCGLTEE 362

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR--LFEVDSENVGYYVLMS 658
           A      M VR   S W  ++     HG  E      +R  L  ++ + V Y  L+S
Sbjct: 363 AERLFSEMQVRNVVS-WTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLS 418


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/747 (35%), Positives = 434/747 (58%), Gaps = 16/747 (2%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T+ +  +A+ G +  +   FD ++  + + WN MI  +  CG   EA+  + +    SG+
Sbjct: 64  TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVF-SGV 122

Query: 143 RPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           + D +T+P V+K+     +L +GKKIH  V+KL F  DV+V  SL+ +Y + G +  A K
Sbjct: 123 KADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEK 182

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +F++MP RD  SWN+MISGY    +   +L +  EM   G   D  +  S L  C+   +
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYS 242

Query: 260 ILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
              G  +H + V+  +E  ++ V  ++++MY+K+G + +A R+F  +++R++V+WN +I 
Sbjct: 243 PNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIG 302

Query: 319 AYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            Y +++    A   F  M +Q G+QPD++TL++L    A L      R++HG+ MRRG F
Sbjct: 303 CYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRG-F 357

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           +  +++  A++DMY + G + SA  +F+ +  K++ISWN++I  Y QNG    A+E+FQ 
Sbjct: 358 LPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQK 417

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           + + + + P+  T  SILPAY+   +L +G +IHA ++K+    +  +   LV MY  CG
Sbjct: 418 LWD-SSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCG 476

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            ++DA   F  V     V WN+II  + +HG G  ++  F +M+   V P+  TF SLL 
Sbjct: 477 DLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLA 536

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACS SG+V EG  YF  M+ E+GI P ++HYG M+DL GR G+   A  FI+ MP  P A
Sbjct: 537 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTA 596

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            IWG+LL A R H ++ +   A++++F+++ +N G YVL+ N+YA   +WE V+ ++ L 
Sbjct: 597 RIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLM 656

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL----RNLTAKMKSLGYVPDK 733
             +G+ +T   S++E  +K  +   G+R+H +  KIY+ L    R +  + +   YV   
Sbjct: 657 ESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYV 716

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
           S + ++     + +    HS RLA  FG+IS+     + +  N R+C  CH + +  S++
Sbjct: 717 SKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKM 776

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T REI+V DS  FHHF +G CSCG+YW
Sbjct: 777 TRREIVVGDSKIFHHFSNGRCSCGNYW 803



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 240/460 (52%), Gaps = 15/460 (3%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L   K++HA+++    +  V+    L++ Y  LG    +   F+ +  R++ +WNSMI
Sbjct: 140 SSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMI 199

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGF 174
           S Y+       ++  F +  L  G +PD ++    L AC ++     GK++HC  ++   
Sbjct: 200 SGYLALEDGFRSLMLFKEM-LKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRI 258

Query: 175 EW-DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           E  DV V  S+L MY ++G  + A ++F  +  R+  +WN +I  Y ++    +A     
Sbjct: 259 ETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQ 318

Query: 234 EMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           +M  + G+  D IT+ ++LP CA    IL G  IH Y ++ G   ++ +   LI+MY ++
Sbjct: 319 KMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEW 374

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G ++ A  +FD++ E++++SWNSIIAAY Q+    +A   F  +  + + PD  T+ S+ 
Sbjct: 375 GQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASIL 434

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A+       R +H +I+ +  +  + II N++V MYA  G +  A   F  + +KDV
Sbjct: 435 PAYAESLSLSEGRQIHAYIV-KSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDV 493

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +SWN++I  YA +G    ++ +F  M   ++++PN+ T+ S+L A S  G + +G + + 
Sbjct: 494 VSWNSIIMAYAVHGFGRISVCLFSEM-IASKVDPNKSTFASLLAACSISGMVDEGWE-YF 551

Query: 473 RVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP 510
             +K     D  +     ++D+ G+ G    A     ++P
Sbjct: 552 ESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 39/292 (13%)

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P  L L     +  QLND   +R++ GF                     A  G++  A 
Sbjct: 42  KPVRLVLRDRYKVTKQLNDPALTRALRGF---------------------ADSGLMEDAL 80

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+ +   D   WN +I G+   GL  EA++++  M   + +  +  TY  ++ + + +
Sbjct: 81  QLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRM-VFSGVKADSFTYPFVIKSVTGI 139

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +L +G KIHA VIK     DV+V   L+ +Y K G   DA  +F ++P    V WN++I
Sbjct: 140 SSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMI 199

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF-- 579
           S +     G ++L  F++ML  G +PD  + +S L ACSH         Y   M +E   
Sbjct: 200 SGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHV--------YSPNMGKELHC 251

Query: 580 -GIKPHLKHYGCMV-----DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
             ++  ++    MV     D++ + G +  A    + + ++ +   W  L+G
Sbjct: 252 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCI-IQRNIVAWNVLIG 302


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 291/743 (39%), Positives = 403/743 (54%), Gaps = 72/743 (9%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F+ +  R+  +WN+MIS     G LS   D FY        R  F   P      R+LV 
Sbjct: 72  FNSMPRRSSISWNAMIS-----GCLSN--DKFYL------ARQLFEKMP-----TRDLVS 113

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
                         W+V ++  +     R+     AR LFD MP RD  SWNAM+SGY Q
Sbjct: 114 --------------WNVMISGCV-----RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQ 154

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   EA +I DEM  +    + I+   +L    ++  I         + +   ++ L  
Sbjct: 155 NGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDAR----RLFESKADWELIS 206

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF-------- 333
            N ++  Y K   +  A  +FD+M ERD VSWN++I+ Y Q+ + + A   F        
Sbjct: 207 WNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV 266

Query: 334 ---TTMQQAGIQPDLL-------------TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
              T M    +Q  +L               VS  +I+A    C+  R      +     
Sbjct: 267 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCK--RMDQARELFEAMP 324

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
            ++V   N ++  YA+ G I  A   F+ +P +D ISW  +I GYAQ+G   EA+ +F  
Sbjct: 325 CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVE 384

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M+   E   N+ T+ S L   + + AL  G ++H RV+K  L    +V   L+ MY KCG
Sbjct: 385 MKRDGE-RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            IDDA  +F  +     V WN +I+ +  HG G +AL  F  M   G+ PD +T V +L+
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLS 503

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSH+GLV +G  YF+ M +++GI  + KHY CM+DL GRAG L  A N ++NMP  PDA
Sbjct: 504 ACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA 563

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
           + WGALLGA RIHGN ELG  A+  +FE++ +N G YVL+SN+YA  G+W  V  +R   
Sbjct: 564 ATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRM 623

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           RDRG+KK PG+S +EV NK+  F  G+  HP+ ++IY  L  L  KMK  GYV     VL
Sbjct: 624 RDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVL 683

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            DVEE+EK H+L  HSE+LA+AFGI++ P   PI++ KNLRVC DCHN  K IS+I  R 
Sbjct: 684 HDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRL 743

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RDS+RFHHF  G CSCGDYW
Sbjct: 744 IILRDSHRFHHFNGGQCSCGDYW 766



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 237/496 (47%), Gaps = 49/496 (9%)

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD----FYTF 149
           +L  +R  FD +  R+V +WN+M+S Y + G + EA + F +    + +  +     Y  
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQ 185

Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
              ++  R L + K           +W++     ++  Y +      AR +FD MP RD 
Sbjct: 186 NGRIEDARRLFESKA----------DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 235

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP--VCARSDNILSGL--- 264
            SWN MISGY Q+G  +EA  + +E  +  V      V+  +   +   +  +  G+   
Sbjct: 236 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK 295

Query: 265 -------LIHLYI----VKHGLEF-------NLFVSNNLINMYAKFGMMRHALRVFDQMM 306
                  +I  Y+    +    E        N+   N +I  YA+ G +  A   FD+M 
Sbjct: 296 NSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP 355

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           +RD +SW +IIA Y QS     A   F  M++ G + +  T  S  S  A++      + 
Sbjct: 356 QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 415

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VHG +++ G       +GNA++ MY K G I+ A  VFEG+  K+V+SWNT+I GYA++G
Sbjct: 416 VHGRVVKAG-LESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 474

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFV 485
              EA+ +F+ M++   I P+  T V +L A SH G + +G +    + ++  +  +   
Sbjct: 475 FGKEALMLFESMKKTG-ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKH 533

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQML 541
            TC++D+ G+ GR+DDA +L   +P    +  W A++    IHG    G+KA     +M 
Sbjct: 534 YTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM- 592

Query: 542 DEGVRPDHITFVSLLT 557
                PD+     LL+
Sbjct: 593 ----EPDNSGMYVLLS 604



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 178/389 (45%), Gaps = 42/389 (10%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++ VF+ T +V+ Y   G L  +R  FD +  +N  +WN++I+ YV+C R+ +A      
Sbjct: 263 VRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQA------ 316

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                  R  F   P     C+N+                W+  +       Y + G   
Sbjct: 317 -------RELFEAMP-----CQNVSS--------------WNTMITG-----YAQNGDIA 345

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR  FD MP RDS SW A+I+GY QSG   EAL +  EM+ +G  ++  T  S L  CA
Sbjct: 346 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 405

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  +H  +VK GLE   +V N L+ MY K G +  A  VF+ + E++VVSWN+
Sbjct: 406 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 465

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +IA Y +      A   F +M++ GI PD +T+V + S  +              + +  
Sbjct: 466 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 525

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEV 434
               +      ++D+  + G ++ A  + + +P + D  +W  L+     +G      + 
Sbjct: 526 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKA 585

Query: 435 FQMMEECNEINP-NQGTYVSILPAYSHVG 462
            +M+    E+ P N G YV +   Y+  G
Sbjct: 586 AKMI---FEMEPDNSGMYVLLSNLYAASG 611



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 193/396 (48%), Gaps = 31/396 (7%)

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           +W++ +     HM  R G  + A +LF+ MP R S SWNAMISG   +     A  + ++
Sbjct: 51  KWNIAITN---HM--RNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M     + D ++   ++  C R  N+ +  L    +     E ++   N +++ YA+ G 
Sbjct: 106 M----PTRDLVSWNVMISGCVRYRNLRAARL----LFDQMPERDVVSWNAMLSGYAQNGY 157

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           ++ A  +FD+M  ++ +SWN ++AAY Q+     A   F    ++    +L++   +   
Sbjct: 158 VKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF----ESKADWELISWNCMMGG 213

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
             + N   ++R +   +  R     D +  N ++  YA+ G +  A  +FE  PV+DV +
Sbjct: 214 YVKRNRLVDARGIFDRMPER-----DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFT 268

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W  +++GY QNG+  EA  VF  M E N ++ N     +I+  Y     + Q  ++    
Sbjct: 269 WTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWN-----AIIAGYVQCKRMDQAREL---- 319

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            +   C +V     ++  Y + G I  A + F ++P+  S+ W AII+ +   G G++AL
Sbjct: 320 FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEAL 379

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
           + F +M  +G R +  TF S L+ C+    +  G++
Sbjct: 380 HLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 415



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 61/444 (13%)

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S+   T A+  P         S L     IVK    +N+ ++N++ N     G    ALR
Sbjct: 20  SLQTTTTANRKPSTRNQPKTTSSLATDADIVK----WNIAITNHMRN-----GQCDSALR 70

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F+ M  R  +SWN++I+    ++    A   F  M       DL++   + S   +  +
Sbjct: 71  LFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR----DLVSWNVMISGCVRYRN 126

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R +R +   +  R     DV+  NA++  YA+ G +  A  +F+ +P K+ ISWN ++ 
Sbjct: 127 LRAARLLFDQMPER-----DVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLA 181

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPN--QGTYV------------------------SI 454
            Y QNG   +A  +F+   +   I+ N   G YV                        ++
Sbjct: 182 AYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM 241

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           +  Y+  G L +      R+ +     DVF  T +V  Y + G +D+A  +F  +P  +S
Sbjct: 242 ISGYAQNGELLEA----QRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNS 297

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V WNAII+ +    + D+A   F  M  + V     ++ +++T  + +G +++ + +F  
Sbjct: 298 VSWNAIIAGYVQCKRMDQARELFEAMPCQNVS----SWNTMITGYAQNGDIAQARNFFDR 353

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP---VRPDASIWGALLGACRIHG 631
           M +   I      +  ++  + ++G+   A +    M     R + S + + L  C    
Sbjct: 354 MPQRDSIS-----WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIA 408

Query: 632 NMELGAVASDRLFEVDSENVGYYV 655
            +ELG     R+ +   E+ G YV
Sbjct: 409 ALELGKQVHGRVVKAGLES-GCYV 431



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 10/271 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           +  C ++   + L   +      + V S   ++  YA  GD++ +R+ FD +  R+  +W
Sbjct: 307 YVQCKRMDQARELFEAM----PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISW 362

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
            ++I+ Y + G   EA+  F +     G R +  TF   L  C  +     GK++H  V+
Sbjct: 363 AAIIAGYAQSGYGEEALHLFVEMK-RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 421

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G E   +V  +LL MYC+ G  + A  +F+ +  ++  SWN MI+GY + G   EAL 
Sbjct: 422 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 481

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMY 289
           + + M+  G+  D +T+  +L  C+ +  +  G      + + +G+  N      +I++ 
Sbjct: 482 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 541

Query: 290 AKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            + G +  A  +   M  E D  +W +++ A
Sbjct: 542 GRAGRLDDAQNLMKNMPFEPDAATWGALLGA 572



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 25/192 (13%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F     +C ++  +   K++H  +V +G     +    L+  Y   G++  +   F+ I 
Sbjct: 397 FTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE 456

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            + V +WN+MI+ Y R G   EA+  F     T G+ PD  T   VL AC         H
Sbjct: 457 EKEVVSWNTMIAGYARHGFGKEALMLFESMKKT-GILPDDVTMVGVLSACS--------H 507

Query: 167 CSVLKLGFEW------DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWN 213
             ++  G E+      D  + A+  H  C      R G  + A+ L  +MP   D+ +W 
Sbjct: 508 TGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWG 567

Query: 214 AMISGYCQSGNA 225
           A++      GN 
Sbjct: 568 ALLGASRIHGNT 579


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 299/832 (35%), Positives = 461/832 (55%), Gaps = 96/832 (11%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--------- 105
           Q C  L   K LH   +++G          L+N Y N+ +L ++  + + I         
Sbjct: 32  QQCKTLTQAKLLHQQYIINGH---------LLNSYTNVTNLIYTYISSNSITNAILLLEK 82

Query: 106 ----SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RN 158
               S+ +VY WN +I   +     + A+  F +   T    PD YTFP V KAC    N
Sbjct: 83  NVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMK-TLHWTPDHYTFPFVFKACGEISN 141

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR---DSGSWNAM 215
              G  IH  V++LGFE +VFV  +++ MY +      ARK+FD++  R   DS +WN++
Sbjct: 142 FELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSI 201

Query: 216 ISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +S Y        A+ +  EM +  G+  D + V +ILPVC      L G  +H + V+ G
Sbjct: 202 VSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSG 261

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           L  ++FV N L++MYAK G M  A +VF++M  +DVV+WN+++  Y Q+     A   F 
Sbjct: 262 LVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFG 321

Query: 335 TMQQAGIQ-----------------------------------PDLLTLVSLTSIVAQLN 359
            M++  I+                                   P+++TL+SL S  A + 
Sbjct: 322 KMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVG 381

Query: 360 DCRNSRSVHGFIMR---RGWF---MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD-- 411
              + +  H + ++   +G      +D+ + NA++DMYAK   +  A A+F+ +  KD  
Sbjct: 382 ALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRD 441

Query: 412 VISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           V++W  +I GYAQ+G A+ A+++F +M +  N I PN  T   +L A + + AL+ G +I
Sbjct: 442 VVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQI 501

Query: 471 HARVIKNC-LCFDV-FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           HA V++   +  DV FVA CL+DMY K G +D A  +F  + + ++V W ++++ +G+HG
Sbjct: 502 HAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHG 561

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           + + A   F +M  E +  D ITF+ +L ACSHSG+             +FG+ P ++HY
Sbjct: 562 RSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHY 608

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL GRAG LG A   I +MP+ P   +W ALL ACRIH N EL   A+ +L E+ +
Sbjct: 609 ACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKA 668

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           +N G Y L+SNIYAN  +W+ V  +  L +  G+KK PGWS ++    ++ FY G+RTH 
Sbjct: 669 DNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHL 728

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           + +KIY+ L +L  ++K+       +F L DV+++EK   L+ HSE+LA+A+ I++ PP 
Sbjct: 729 QSQKIYETLADLIKRIKA-------NFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPG 781

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +PI+I KNLR+CGD H+   +IS I E EII+RDS+RFH FK+G CSC  YW
Sbjct: 782 APIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 279/749 (37%), Positives = 422/749 (56%), Gaps = 37/749 (4%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV--DGKKI 165
           R+  ++NS+IS      +   A+D               +T   VL AC +L   DG+++
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190

Query: 166 ----HCSVLKLGF---EWDVFVAASLLHMYCRFGLANVARKLFDDMPVR------DSGSW 212
               H   LK GF     + F   +LL MY R GL + A+ LF            D  +W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N MIS   Q G   EA+++L +M   GV  D +T AS LP C+R + +  G  +H  ++K
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310

Query: 273 HG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--RDVVSWNSIIAAYEQSNDPITA 329
              L  N FV++ L++MYA    +  A RVFD + E  R +  WN++I  Y Q+     A
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370

Query: 330 HGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
              F+ M+ +AG  P   T+  +    A+        ++HG++++RG    +  + NA++
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRG-MAGNRFVQNALM 429

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME--------- 439
           DMYA+LG ++ A  +F  +  +DV+SWNTLITG    G A+EA ++   M+         
Sbjct: 430 DMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSS 489

Query: 440 ------ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
                 E +   PN  T +++LP  + + A  +G +IH   +++ L  D+ V + LVDMY
Sbjct: 490 STTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMY 549

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITF 552
            KCG +  + ++F ++PR + + WN +I  +G+HG GD+A+  F +M   G   P+ +TF
Sbjct: 550 AKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTF 609

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM- 611
           ++ L ACSHSGLV  G   FH M+ + G+KP    + C+VD+ GRAG L  A++ I +M 
Sbjct: 610 IAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSME 669

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P     S W +LLGACR+H N+ELG VA++RLFE++     +YVL+ NIY+  G W+   
Sbjct: 670 PGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSV 729

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            VR   R +G+ K PG S IE++  +  F  G  +HP   +++  +  L  +M+  GY P
Sbjct: 730 AVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAP 789

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D S VL DV+EDEK  +L  HSE+LAIAFG++ +PP + I++ KNLRVC DCH   KF+S
Sbjct: 790 DTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMS 849

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++  R+I++RD  RFHHF+DG CSCGDYW
Sbjct: 850 KMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 126/276 (45%), Gaps = 22/276 (7%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V  G     F    L++ YA LG++  +R  F  I  R+V +WN++I+  V  G 
Sbjct: 409 MHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGH 468

Query: 126 LSEAVDCFYQFTLTSGLR---------------PDFYTFPPVLKACRNL---VDGKKIHC 167
            +EA     +  L S                  P+  T   +L  C  L     GK+IH 
Sbjct: 469 AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHG 528

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             ++   E D+ V ++L+ MY + G    +R +FD +P R+  +WN +I  Y   G   E
Sbjct: 529 YAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDE 588

Query: 228 ALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNL 285
           A+ + DEM   G  + + +T  + L  C+ S  +  GL L H     HG++    +   +
Sbjct: 589 AVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACV 648

Query: 286 INMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAA 319
           +++  + G +  A  +   M   E+ V +W+S++ A
Sbjct: 649 VDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 15/262 (5%)

Query: 366 SVHGFIMRRGWFME-DVIIGNAVVDMYAKLG--IINSACAVFEGLPVKDVISWNTLITGY 422
           S+H   +RR         +GNA++  YA+ G      A        ++D +S+N+LI+  
Sbjct: 84  SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV---GALRQGIKIHARVIKNCL 479
                   A++  + M      + +  T VS+L A SH+      R G + HA  +K   
Sbjct: 144 CLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF 203

Query: 480 C---FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS------VPWNAIISCHGIHGQG 530
                + F    L+ MY + G +DDA SLF     + S      V WN +IS     G+ 
Sbjct: 204 LDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRC 263

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            +A+     M+  GVRPD +TF S L ACS   +++ G+    ++ ++  +  +      
Sbjct: 264 AEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASA 323

Query: 591 MVDLFGRAGHLGMAHNFIQNMP 612
           +VD++     +  A      +P
Sbjct: 324 LVDMYAGNEKVASARRVFDMVP 345



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 8/127 (6%)

Query: 40  CLENESREIDFDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C+ N    I    L   C  L      K +H   V       +   + LV+ YA  G L+
Sbjct: 500 CMPNN---ITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLA 556

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            SR  FD +  RNV TWN +I  Y   G   EAV  F +        P+  TF   L AC
Sbjct: 557 ASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAAC 616

Query: 157 RN--LVD 161
            +  LVD
Sbjct: 617 SHSGLVD 623


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/713 (38%), Positives = 403/713 (56%), Gaps = 27/713 (3%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSV 169
           +N +IS Y        + +C+           D +  P +LKAC     G   +++H   
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
            K GF  DVFV  +L++MY + G    AR +FD MP RD  SW  M+  Y +S    EAL
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS--NNLIN 287
            ++ EM+  GV +  + + S++ V     ++ SG  +H YIV++  +  + VS    LI+
Sbjct: 175 RLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALID 234

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MY K G +  A R+FD++ +R VVSW  +IA   +S         F  M +  + P+ +T
Sbjct: 235 MYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEIT 294

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           L+SL +    +      +  H +++R G+ M   ++  A++DMY K G +  A A+F G+
Sbjct: 295 LLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALV-TALIDMYGKCGQVGYARALFNGV 353

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             KDV  W+ LI+ YA      +   +F  M   N++ PN  T VS+L   +  GAL  G
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLN-NDVKPNNVTMVSLLSLCAEAGALDLG 412

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
              HA + ++ L  DV + T L++MY KCG +  A SLF +  +     WN +++   +H
Sbjct: 413 KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMH 472

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +AL  F +M   GV P+ ITFVS+  ACSHSGL                    ++H
Sbjct: 473 GCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------------MEH 512

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           YGC+VDL GRAGHL  AHN I+NMP+RP+  IWGALL AC++H N+ LG VA+ ++ E+D
Sbjct: 513 YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELD 572

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            +N GY VL SNIYA+  +W  V  VR      G+KK PG S IEV+  V  F +G++  
Sbjct: 573 PQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKAC 632

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
            +  K+Y+ +  +  K++  GY P+ + VL +++E+EKE  L+ HSE+LA AFG+IS+ P
Sbjct: 633 TQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAP 692

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +PI+I KNLR+C DCH  TK +S+I  R IIVRD NRFHHF +G CSC  YW
Sbjct: 693 GTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 233/470 (49%), Gaps = 28/470 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LH     +G    VF    L+N Y   G L  +R  FD +  R+V +W +M+  YVR 
Sbjct: 108 RELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRS 167

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLK-LGFE-WDV 178
               EA+    +     G++        ++    NL+D   G+ +H  +++ +G E  +V
Sbjct: 168 KAFGEALRLVREMQFV-GVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEV 226

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            +  +L+ MYC+ G    A++LFD +  R   SW  MI+G  +S    E     + M  E
Sbjct: 227 SMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEE 286

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            +  + IT+ S++  C     +  G   H Y++++G   +L +   LI+MY K G + +A
Sbjct: 287 KLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYA 346

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +F+ + ++DV  W+ +I+AY   +        F  M    ++P+ +T+VSL S+ A+ 
Sbjct: 347 RALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEA 406

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 +  H +I R G  + DVI+  A+++MYAK G +  A ++F     +D+  WNT+
Sbjct: 407 GALDLGKWTHAYINRHGLEV-DVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTM 465

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           + G++ +G   EA+E+F  ME  + + PN  T+VSI  A SH G +              
Sbjct: 466 MAGFSMHGCGKEALELFSEMES-HGVEPNDITFVSIFHACSHSGLMEH------------ 512

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
                    CLVD+ G+ G +D+A ++   +P R +++ W A+++   +H
Sbjct: 513 -------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/607 (41%), Positives = 375/607 (61%), Gaps = 3/607 (0%)

Query: 215 MISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           MISG+ ++    +++ +  +M L  G   D  TV ++LP  A    +  G+ I    +K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G   ++ +   LI++++K G +  A  +F ++ ++D++S N++I+ +  + +   +   F
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             +  +G +    T+V L  + +          +HGF ++ G  +    +  A+  +Y +
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLG-IVSHSSVSTALTTVYCR 179

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
           L  +  A  +F+    K + SWN +I+G  QNGL   AI +FQ M++ N +NPN  T  S
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQK-NNVNPNPVTVTS 238

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           IL A + +GAL  G  +H+ +  N    +V+V+T L+DMY KCG I  A  LF  +P  +
Sbjct: 239 ILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKN 298

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V WNA+IS +G+HG G +AL  F  ML   V+P  +TF+S+L ACSH+GLV EG   FH
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            M  +FG +P  +HY CMVD+ GRAG L  A  FI+ MPV P   +WGALLGAC IH + 
Sbjct: 359 TMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDT 418

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
            L  VAS++LFE+D EN+GYYVLMSNIY+   K+     VR +A+ + L KTPG + IE+
Sbjct: 419 NLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEI 478

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
                +F +G+++HP+ + IY EL  LT KM   G+  + + VL D+EE+EKE  +  HS
Sbjct: 479 GQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHS 538

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LAIAFG+IS+ P + I+I KNLRVC DCHNWTKF+S+IT+R I+VRD+NRFHHFKDG+
Sbjct: 539 EKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGL 598

Query: 814 CSCGDYW 820
           CSCGDYW
Sbjct: 599 CSCGDYW 605



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 225/448 (50%), Gaps = 11/448 (2%)

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           MIS +V+     +++  F    L +G R D  T   VL A   L +   G +I C  +K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF   V +   L+ ++ + G   +AR LF ++  +D  S NAMISG+  +G   +++ + 
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            E+   G  +   T+  ++PV +   +      IH + VK G+  +  VS  L  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             M  A ++FD+  E+ + SWN++I+   Q+     A   F TMQ+  + P+ +T+ S+ 
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           S  AQ+        VH  I +   F  +V +  A++DMYAK G I  A  +F+ +P K+ 
Sbjct: 241 SACAQIGALSLGEWVHSLI-KSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNE 299

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++WN +I+GY  +G   EA+++F  M   + + P   T++S+L A SH G +++G  I  
Sbjct: 300 VTWNAMISGYGLHGHGQEALKLFYDMLS-SSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 473 RVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
            ++ +   F+       C+VD+ G+ G++  A+     +P     P W A++    IH  
Sbjct: 359 TMVHD-FGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKD 417

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLT 557
            + A     ++ +  + P++I +  L++
Sbjct: 418 TNLAHVASEKLFE--LDPENIGYYVLMS 443



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 183/401 (45%), Gaps = 21/401 (5%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T L++ ++  G++  +R  F  I  +++ + N+MIS +   G   ++V  F +  L+SG 
Sbjct: 70  TGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKEL-LSSGE 128

Query: 143 RPDFYT---FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           R    T     PV     +      IH   +KLG      V+ +L  +YCR      AR+
Sbjct: 129 RVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQ 188

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           LFD+   +   SWNAMISG  Q+G    A+ +   M+   V+ +P+TV SIL  CA+   
Sbjct: 189 LFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGA 248

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +  G  +H  I  +  E N++VS  LI+MYAK G +  A  +FD M E++ V+WN++I+ 
Sbjct: 249 LSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISG 308

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           Y        A   F  M  + ++P  LT +S+    +     +    +   ++    F  
Sbjct: 309 YGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEP 368

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIEVF 435
                  +VD+  + G +  A    + +PV+     W  L+     +    LA  A    
Sbjct: 369 LAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVA---- 424

Query: 436 QMMEECNEINP-NQGTYV------SILPAYSHVGALRQGIK 469
              E+  E++P N G YV      S+   Y    ++RQ  K
Sbjct: 425 --SEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAK 463



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 6/270 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H   V  G +     ST L   Y  L ++ F+R  FD  + + + +WN+MIS   + G 
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNG- 212

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAA 182
           L++A    +Q    + + P+  T   +L AC     L  G+ +H  +    FE +V+V+ 
Sbjct: 213 LTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVST 272

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+ MY + G   VAR+LFD MP ++  +WNAMISGY   G+  EAL +  +M    V  
Sbjct: 273 ALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKP 332

Query: 243 DPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
             +T  S+L  C+ +  +  G  + H  +   G E        ++++  + G ++ AL  
Sbjct: 333 TGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEF 392

Query: 302 FDQM-MERDVVSWNSIIAAYEQSNDPITAH 330
              M +E     W +++ A     D   AH
Sbjct: 393 IKAMPVEPGPPVWGALLGACMIHKDTNLAH 422


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/750 (36%), Positives = 416/750 (55%), Gaps = 45/750 (6%)

Query: 114 NSMISVYVRCGRLSE-------AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
           ++++ V V+C  LS        A++C        G   +       +  C N +  K+IH
Sbjct: 33  STLLRVSVKCSALSTPLSLGQIAMNCTEAVKGEKGNEVESTNILEFIDQCTNTMQLKQIH 92

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYCQSGN 224
             +L+     D + A+ LL  Y     + +  A+ +F+ +P  +   WN +I GY  S +
Sbjct: 93  AHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSD 152

Query: 225 AVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
             ++  I   M L   S  P   T   +    +R   +  G ++H  ++K  L  +LF+ 
Sbjct: 153 PTQSFLIFLHM-LHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFIL 211

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N+LIN Y   G    A RVF  M  +DVVSWN++I A+     P  A   F  M+   ++
Sbjct: 212 NSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVK 271

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+++T+VS+ S  A+  D    R +  +I   G F E +I+ NA++DMY K G IN A  
Sbjct: 272 PNVITMVSVLSACAKKIDLEFGRWICSYIENNG-FTEHLILNNAMLDMYVKCGCINDAKD 330

Query: 403 VFEGLPVKDVISW-------------------------------NTLITGYAQNGLASEA 431
           +F  +  KD++SW                               N LI+ Y QNG    A
Sbjct: 331 LFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVA 390

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           + +F  M+   +  P++ T +  L A + +GA+  G  IH  + K+ +  +  +AT L+D
Sbjct: 391 LSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLD 450

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KCG ++ AM +F+ V R     W+A+I    ++GQG  AL+ F  ML+  ++P+ +T
Sbjct: 451 MYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVT 510

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F ++L AC+H+GLV+EG++ F  M+  +GI P ++HY C+VD+FGRAG L  A +FI+ M
Sbjct: 511 FTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKM 570

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P+ P A++WGALLGAC  HGN+EL  +A   L E++  N G +VL+SNIYA  G WE V 
Sbjct: 571 PIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVS 630

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +R L RD  +KK P  SSI+VN  V  F  G+ +HP  +KIY +L  ++ K K +GY P
Sbjct: 631 NLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYKP 690

Query: 732 DKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           D S +LQ  EED   E  L  HSE+LAIAFG+IS+    PI+I KN+R+CGDCH + K +
Sbjct: 691 DMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIRIVKNIRICGDCHAFAKLV 750

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           SQ+ +R+I++RD  RFHHF+ G CSC DYW
Sbjct: 751 SQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 279/576 (48%), Gaps = 51/576 (8%)

Query: 35  QISPDCLE-------NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVN 87
           QI+ +C E       NE    +  +    CT    +K++HA ++ + +    ++++KL+ 
Sbjct: 53  QIAMNCTEAVKGEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLT 112

Query: 88  FYA--NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
            YA  +   L ++++ F+ I   N+Y WN++I  Y      +++   F     +    P+
Sbjct: 113 AYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPN 172

Query: 146 FYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
            +TFP + KA   L     G  +H  V+K     D+F+  SL++ Y   G  ++A ++F 
Sbjct: 173 KFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFT 232

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
           +MP +D  SWNAMI+ +   G   +AL +  EM ++ V  + IT+ S+L  CA+  ++  
Sbjct: 233 NMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEF 292

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS---------- 312
           G  I  YI  +G   +L ++N +++MY K G +  A  +F++M E+D+VS          
Sbjct: 293 GRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAK 352

Query: 313 ---------------------WNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVS 350
                                WN++I+AYEQ+  P  A   F  MQ     +PD +TL+ 
Sbjct: 353 LGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLIC 412

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
                AQL        +H +I +    + +  +  +++DMYAK G +N A  VF  +  K
Sbjct: 413 ALCASAQLGAIDFGHWIHVYIKKHDINL-NCHLATSLLDMYAKCGNLNKAMEVFHAVERK 471

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           DV  W+ +I   A  G    A+++F  M E   I PN  T+ +IL A +H G + +G ++
Sbjct: 472 DVYVWSAMIGALAMYGQGKAALDLFSSMLEA-YIKPNAVTFTNILCACNHAGLVNEGEQL 530

Query: 471 HARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
             ++     +   +    C+VD++G+ G ++ A S   ++P   ++  W A++     HG
Sbjct: 531 FEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590

Query: 529 QGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSG 563
             + A   ++ +L+  + P +H  FV L    + +G
Sbjct: 591 NVELAELAYQNLLE--LEPCNHGAFVLLSNIYAKAG 624


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 283/740 (38%), Positives = 416/740 (56%), Gaps = 49/740 (6%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF----YTFPPVLKACRNLVDGKK 164
           ++  WN  IS Y+R GR SEA+  F +    S +  +     Y      +  R L D   
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
               V      W+V +       Y R      AR+LF+ MP RD  SWN ++SGY Q+G 
Sbjct: 118 ERDLV-----SWNVMIKG-----YVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167

Query: 225 AVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
             +A  + D M     VS + +  A +         +L G   +  +V           N
Sbjct: 168 VDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSW---------N 218

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF---------- 333
            L+  + K   +  A + FD M  RDVVSWN+II  Y Q+ +   A   F          
Sbjct: 219 CLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFT 278

Query: 334 -TTMQQAGIQPDLLTLV-SLTSIVAQLNDCRNSRSVHGFI------MRRGWF----MEDV 381
            T M    IQ  ++     L   + + N+   +  + G++      M +  F      +V
Sbjct: 279 WTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV 338

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME-E 440
              N ++  YA+ G I+ A  +F+ +P +D +SW  +I GY+Q+G + EA+ +F +ME E
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMERE 398

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              +N  + ++ S L   + V AL  G ++H R++K       FV   L+ MY KCG I+
Sbjct: 399 GGRLN--RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 456

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +A  LF ++     V WN +I+ +  HG G++AL FF  M  EG++PD  T V++L+ACS
Sbjct: 457 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACS 516

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H+GLV +G++YFH M +++G++P+ +HY CMVDL GRAG L  AHN ++NMP  PDA+IW
Sbjct: 517 HTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIW 576

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           G LLGA R+HGN EL   A+D++F ++ EN G YVL+SN+YA+ G+W  V ++R   RD+
Sbjct: 577 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 636

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+KK PG+S IE+ NK   F  G+  HP+ ++I+  L +L  +MK  GYV   S VL DV
Sbjct: 637 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDV 696

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           EE+EKE ++  HSERLA+A+GI+      PI++ KNLRVC DCHN  K+++++T R II+
Sbjct: 697 EEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIIL 756

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD+NRFHHFKDG CSCGDYW
Sbjct: 757 RDNNRFHHFKDGSCSCGDYW 776



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 227/465 (48%), Gaps = 30/465 (6%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF--- 133
           + V S   +++ YA  G +  +R  FD +  +N  +WN+++S YV+  +L EA   F   
Sbjct: 150 RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSR 209

Query: 134 --YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
             +     + L   F     +++A R   D  K+           DV    +++  Y + 
Sbjct: 210 ENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMKVR----------DVVSWNTIITGYAQN 258

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G  + AR+LFD+ PV D  +W AM+SGY Q+    EA ++ D M       + ++  ++L
Sbjct: 259 GEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNEVSWNAML 314

Query: 252 PVCARSDNI-LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
               + + + ++  L  +   +     N+   N +I  YA+ G +  A  +FD+M +RD 
Sbjct: 315 AGYVQGERVEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 369

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSW ++IA Y QS     A   F  M++ G + +  +  S  S  A +      + +HG 
Sbjct: 370 VSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 429

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           +++ G +     +GNA++ MY K G I  A  +F+ +  KD++SWNT+I GY+++G   E
Sbjct: 430 LVKGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEE 488

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCL 489
           A+  F+ M+    + P+  T V++L A SH G + +G +  H       +  +     C+
Sbjct: 489 ALRFFESMKR-EGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACM 547

Query: 490 VDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
           VD+ G+ G +++A +L   +P    +  W  ++    +HG  + A
Sbjct: 548 VDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 592



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 192/411 (46%), Gaps = 25/411 (6%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           S K++ V S   ++  YA  G++  +R  FD     +V+TW +M+S Y++   + EA + 
Sbjct: 239 SMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEAREL 298

Query: 133 FYQFTLTSGLRPDF----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMY 188
           F +    + +  +     Y     ++  + L D   + C  +     W+  +       Y
Sbjct: 299 FDRMPERNEVSWNAMLAGYVQGERVEMAKELFD--VMPCRNVST---WNTMITG-----Y 348

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
            + G  + A+ LFD MP RD  SW AMI+GY QSG++ EAL +   M  EG  ++  + +
Sbjct: 349 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFS 408

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S L  CA    +  G  +H  +VK G E   FV N L+ MY K G +  A  +F +M  +
Sbjct: 409 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 468

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           D+VSWN++IA Y +      A  FF +M++ G++PD  T+V++ S  +        R   
Sbjct: 469 DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 528

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG- 426
             + +      +      +VD+  + G++  A  + + +P + D   W TL+     +G 
Sbjct: 529 HTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGN 588

Query: 427 --LASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
             LA  A + +F M  E      N G YV +   Y+  G      K+  R+
Sbjct: 589 TELAETAADKIFAMEPE------NSGMYVLLSNLYASSGRWGDVGKLRVRM 633



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 10/186 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+LH  LV  G     F    L+  Y   G +  +   F  ++ +++ +WN+MI+ Y R 
Sbjct: 424 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 483

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKK--IHCSVLKLGFEWDVF 179
           G   EA+  F++     GL+PD  T   VL AC +  LVD  +   H      G   +  
Sbjct: 484 GFGEEALR-FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQ 542

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
             A ++ +  R GL   A  L  +MP   D+  W  ++      GN   A    D++   
Sbjct: 543 HYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI--- 599

Query: 239 GVSMDP 244
             +M+P
Sbjct: 600 -FAMEP 604


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/662 (39%), Positives = 398/662 (60%), Gaps = 10/662 (1%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRDSGSWNAMISGY 219
           K+IH  +L+ G  +D F A+ ++  +C     G    AR +F  +P   S + N++I G 
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIV-AFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGC 63

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
                  EAL    EM ++G+  D  T  S+   C  S     G  IH +  K G   + 
Sbjct: 64  TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDT 120

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           +  N L+NMY+  G +  A +VFD+M ++ VVSW ++I  + Q + P  A   F  M ++
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180

Query: 340 -GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             ++P+ +TLV++ +  A+  D    + +H +I   G F   V++   ++D+Y K G + 
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHG-FGRHVVLNTVLMDVYCKCGCVQ 239

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  +F+    K++ SWN +I G+ ++    EA+ +F+ M+    I  ++ T  S+L A 
Sbjct: 240 LARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQ-TKGIKGDKVTMASLLLAC 298

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +H+GAL  G  +HA + K  +  DV + T LVDMY KCG I+ A+ +F+++P    + W 
Sbjct: 299 THLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWT 358

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           A+I    + GQ + AL +F +M  +GV+PD ITFV +L ACSH+G V EG  +F+ M + 
Sbjct: 359 ALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDT 418

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GI+P ++HYG +VD+ GRAG +  A   I++MP+ PD  + G LLGACRIHGN+E    
Sbjct: 419 YGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAER 478

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A+ +L E+D  + G YVL+SNIY +  KWE     R L  +RG++K PG S IEV+  V 
Sbjct: 479 AAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVH 538

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+ +H +  +I + L ++ +K+K+ GYVPDKS VL D+ E+EKE  L+ HSE+LAI
Sbjct: 539 EFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAI 598

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG++S+   +PI++ KNLR+C DCH+ TK IS++  REIIVRD NRFHHFKDG CSC  
Sbjct: 599 AFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRG 658

Query: 819 YW 820
           +W
Sbjct: 659 FW 660



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 170/531 (32%), Positives = 270/531 (50%), Gaps = 13/531 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMI 117
           +  +K++HA ++ +G     F+++K+V F +    G L ++R  F  I     YT NS+I
Sbjct: 1   MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWD 177
                     EA+  FYQ  +  GL PD YTFP + K+CRN  +GK+IHC   KLGF  D
Sbjct: 61  RGCTDKNLHQEAL-LFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASD 119

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE-MR 236
            +   +L++MY   G    ARK+FD M  +   SW  MI  + Q     EA+ + D  M+
Sbjct: 120 TYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            E V  + +T+ ++L  CAR+ ++     IH YI +HG   ++ ++  L+++Y K G ++
Sbjct: 180 SENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQ 239

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  +FD+  E+++ SWN +I  + + ++   A   F  MQ  GI+ D +T+ SL     
Sbjct: 240 LARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACT 299

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L      + +H +I ++   + DV +G A+VDMYAK G I +A  VF  +P KDV++W 
Sbjct: 300 HLGALELGKWLHAYIKKQRIDV-DVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWT 358

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            LI G A  G A  A++ F  M     + P+  T+V +L A SH G + +GI  H   + 
Sbjct: 359 ALILGLAMCGQAENALQYFDEM-HIKGVKPDAITFVGVLAACSHAGFVDEGIS-HFNSMS 416

Query: 477 NCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHGQGDKA 533
           +       +     LVD+ G+ GRI +A  L   +P +        ++    IHG  + A
Sbjct: 417 DTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAA 476

Query: 534 LNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
               +Q+L+  + P H  T+V L      S    E +R   +M E    KP
Sbjct: 477 ERAAKQLLE--IDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKP 525



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 205/424 (48%), Gaps = 28/424 (6%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  LF+SC      K++H      G     ++   L+N Y+N G L  +R  FD +  + 
Sbjct: 91  FPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKT 150

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           V +W +MI V+ +  + +EAV  F +   +  ++P+  T   VL AC   R+L   K+IH
Sbjct: 151 VVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIH 210

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             + + GF   V +   L+ +YC+ G   +AR LFD    ++  SWN MI+G+ +  N  
Sbjct: 211 EYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYE 270

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  EM+ +G+  D +T+AS+L  C     +  G  +H YI K  ++ ++ +   L+
Sbjct: 271 EALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALV 330

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MYAK G +  A++VF +M E+DV++W ++I           A  +F  M   G++PD +
Sbjct: 331 DMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAI 390

Query: 347 TLVSLTSI----------VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           T V + +           ++  N   ++  +   I   G           +VD+  + G 
Sbjct: 391 TFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYG----------GLVDILGRAGR 440

Query: 397 INSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSI 454
           I  A  + + +P+  D      L+     +G   EA E  +  ++  EI+P + GTYV +
Sbjct: 441 IAEAEELIKSMPMAPDQFVLGGLLGACRIHG-NLEAAE--RAAKQLLEIDPYHSGTYVLL 497

Query: 455 LPAY 458
              Y
Sbjct: 498 SNIY 501


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 285/818 (34%), Positives = 435/818 (53%), Gaps = 78/818 (9%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + SC  L   +RL   L    K   V +   ++N YA  G LS +   FD +  R+V +W
Sbjct: 65  YLSCGALSDARRL---LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASW 121

Query: 114 NSMIS-------VYVRCGRLS------EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
           N+++S        ++ CG L       + +  F++F        DF+  P V  A  ++ 
Sbjct: 122 NTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKF--------DFWGDPDVETALVDMF 173

Query: 161 DGKKIHCSVLKLGFEW-------DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
               + C  +              +F   S+L  Y +    + A + F+DM  RD  SWN
Sbjct: 174 ----VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 229

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
            MI+   QSG   EAL ++ EM  +GV +D  T  S L  CAR  ++  G  +H  +++ 
Sbjct: 230 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 289

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
             + + +V++ LI +YAK G  + A RVF+ + +R+ VSW  +I    Q      +   F
Sbjct: 290 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 349

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M+   +  D   L +L S      D    R +H   ++ G     +++ N+++ +YAK
Sbjct: 350 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSG-HNRAIVVSNSLISLYAK 408

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQ-----------NGLAS------------- 429
            G + +A  VF  +  +D++SW ++IT Y+Q           +G+A+             
Sbjct: 409 CGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAY 468

Query: 430 -------EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
                  + ++++  M    ++ P+  TYV++    + +GA + G +I    +K  L  +
Sbjct: 469 IQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILN 528

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V VA   + MY KCGRI +A  LF  +     V WNA+I+ +  HG G +A   F  ML 
Sbjct: 529 VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLS 588

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           +G +PD+I++V++L+ CSHSGLV EG+ YF MM    GI P L+H+ CMVDL GRAGHL 
Sbjct: 589 KGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLT 648

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A + I  MP++P A +WGALL AC+IHGN EL  +A+  +FE+DS + G Y+L++ IY+
Sbjct: 649 EAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYS 708

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
           + GK +   +VR L RD+G+KK PG+S +EV NKV +F   + +HP+   I +++  L  
Sbjct: 709 DAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELME 768

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           K+  LGYV           E  +  I   HSE+LA+AFGI+S P   PI I KNLR+CGD
Sbjct: 769 KIAHLGYVR---------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGD 817

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH   K IS +T+RE ++RD  RFHHFK G CSCGDYW
Sbjct: 818 CHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/552 (43%), Positives = 363/552 (65%), Gaps = 33/552 (5%)

Query: 301 VFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +F++ +++ +V SWNS+IA   +S D + A   F++M++  ++P+  T        + L 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII---------------------- 397
           D  + R  H   +  G F  D+ + +A+VDMY+K G +                      
Sbjct: 91  DLHSGRQAHQQALIFG-FEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149

Query: 398 ---------NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
                    + A  VF+G+  +DVISWN++I  YAQNG+++E++E+F  M +  EIN N 
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T  ++L A +H G+ R G  IH +VIK  L  +VFV T ++DMY KCG+++ A   F +
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +   +   W+A+++ +G+HG   +AL  F +M   GV+P++ITFVS+L ACSH+GL+ EG
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
             +F  M  EF ++P ++HYGCMVDL GRAG+L  A + I+ M +RPD  +WGALLGACR
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           +H N++LG +++ +LFE+D +N GYYVL+SNIYA+ G+WE V+ +R L ++ GL K PG+
Sbjct: 390 MHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGF 449

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI 748
           S +++  +V +F  G+R HP++EKIY+ L  L+ K++ +GYVPD + VL DV  +EKE +
Sbjct: 450 SLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMV 509

Query: 749 LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
           L  HSE+LA+AFGI+++ P + I I KNLRVCGDCH   KFIS+I +REI+VRDS RFHH
Sbjct: 510 LRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHH 569

Query: 809 FKDGICSCGDYW 820
           F+DG+CSCGDYW
Sbjct: 570 FRDGLCSCGDYW 581



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 59/363 (16%)

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
           ++   NV++WNS+I+   R G   EA+  F      S L+P+  TFP  +K+C  L+D  
Sbjct: 35  YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKSCSALLDLH 93

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD----------------- 203
            G++ H   L  GFE D+FV+++L+ MY + G    AR LFD+                 
Sbjct: 94  SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153

Query: 204 --------------MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVA 248
                         M  RD  SWN++I+ Y Q+G + E+++I   M  +G ++ + +T++
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           ++L  CA S +   G  IH  ++K GLE N+FV  ++I+MY K G +  A + FD+M E+
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           +V SW++++A Y        A   F  M  AG++P+ +T VS+ +  +           H
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS-----------H 322

Query: 369 GFIMRRGWFM-------EDVIIG----NAVVDMYAKLGIINSACAVFEGLPVK-DVISWN 416
             ++  GW          DV  G      +VD+  + G +  A  + +G+ ++ D + W 
Sbjct: 323 AGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWG 382

Query: 417 TLI 419
            L+
Sbjct: 383 ALL 385



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 45/411 (10%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SWN++I+   +SG++VEAL     MR   +  +  T    +  C+   ++ SG   H   
Sbjct: 43  SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 102

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  G E +LFVS+ L++MY+K G +R A  +FD++  R++VSW S+I  Y Q++D   A 
Sbjct: 103 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 162

Query: 331 GFFTTM---------------QQAGIQPDLLTL--------------VSLTSIV---AQL 358
             F  M                Q G+  + + +              V+L++++   A  
Sbjct: 163 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 222

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
              R  + +H  +++ G    +V +G +++DMY K G +  A   F+ +  K+V SW+ +
Sbjct: 223 GSQRLGKCIHDQVIKMG-LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 281

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           + GY  +G A EA+EVF  M     + PN  T+VS+L A SH G L +G      +    
Sbjct: 282 VAGYGMHGHAKEALEVFYEMNMAG-VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHE- 339

Query: 479 LCFDVFVAT----CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
             FDV        C+VD+ G+ G + +A  L   +  R   V W A++    +H   D  
Sbjct: 340 --FDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTAC-SHSGLVSEGQRYFHMMQEEFGIKP 583
               R++ +  + P +  +  LL+   + +G   + +R   +M+    +KP
Sbjct: 398 EISARKLFE--LDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP 446



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 47/308 (15%)

Query: 55  QSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN-- 109
           +SC+ L   H  ++ H   ++ G    +F S+ LV+ Y+  G+L  +R  FD IS+RN  
Sbjct: 84  KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIV 143

Query: 110 -----------------------------VYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
                                        V +WNS+I+VY + G  +E+++ F++     
Sbjct: 144 SWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDG 203

Query: 141 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
            +  +  T   VL AC +      GK IH  V+K+G E +VFV  S++ MYC+ G   +A
Sbjct: 204 EINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMA 263

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           RK FD M  ++  SW+AM++GY   G+A EAL++  EM + GV  + IT  S+L  C+ +
Sbjct: 264 RKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHA 323

Query: 258 DNILSG-----LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DVV 311
             +  G      + H + V+ G+E        ++++  + G ++ A  +   M  R D V
Sbjct: 324 GLLEEGWHWFKAMSHEFDVEPGVEH----YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV 379

Query: 312 SWNSIIAA 319
            W +++ A
Sbjct: 380 VWGALLGA 387


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/758 (36%), Positives = 409/758 (53%), Gaps = 103/758 (13%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+ +HC ++K G    V++  +L+  Y + G    A  +FD+MP++ + SWN +ISGY +
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 222 SGNAVEALDILDEMR-------------------------------LEGVSMDPITVASI 250
            GN   +  +L EM                                 E V     TV+++
Sbjct: 89  QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM---- 306
           L  CA +  +  G  IH ++VK GL   + V+ +L+NMYAK G    A  VFD+M     
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 307 ---------------------------ERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQ 338
                                      +RD+VSWNS+I+ Y Q    + A   F+ M  +
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK----- 393
             ++PD  TL S+ S  A L      + +H +I+R        + GNA++ MYAK     
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV-GNALISMYAKSGGVE 327

Query: 394 ----------------------------LGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
                                       LG +  A  +F  L  +DV++W  +I GY QN
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 426 GLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           GL ++A+E+F++M   NE   PN  T  ++L   S +  L  G +IHA  IK        
Sbjct: 388 GLWNDALELFRLM--VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V   L+ MY K G I+ A  +F  +P  +   V W ++I     HG G +A+N F +ML 
Sbjct: 446 VTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G++PDHIT+V +L+AC+H GLV +G++Y++MM E   I+P L HY CM+DL+GRAG L 
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+ FI++MP+ PD   WG+LL +C+IH N +L  VA++RL  +D  N G Y+ ++N+Y+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             GKWE   + R L +DRG++K  G S I + N+V  F   +  HP+ ++IY  +  +  
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWE 684

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           ++K +G++PD   VL D+EE+ KE IL  HSE+LAIAFG++++P  + ++I KNLRVC D
Sbjct: 685 EIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCND 744

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  KFIS++  REIIVRD+ RFHHFKDG CSC DYW
Sbjct: 745 CHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 172/600 (28%), Positives = 276/600 (46%), Gaps = 107/600 (17%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H  ++  G    V+    L+ FYA  G L F+ H FD +  ++ ++WN++IS Y + 
Sbjct: 30  RSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQ 89

Query: 124 GR-------LSEAVDC-----------FYQFTL------------TSGLRPDFYTFPPVL 153
           G        L E  DC           + QF L            +  + P  +T   VL
Sbjct: 90  GNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149

Query: 154 KAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD-------- 202
            +C   + L  G+KIH  V+KLG    V VA SLL+MY + G   +A+ +FD        
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIS 209

Query: 203 -----------------------DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
                                   MP RD  SWN+MISGY Q G  +EAL I  +M  E 
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEP 269

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA-------- 290
            +  D  T+ASIL  CA  + +  G  IH YI++   E +  V N LI+MYA        
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329

Query: 291 -------------------------KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                                    K G ++ A  +F+++ +RDVV+W ++I  Y Q+  
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  M   G +P+  TL ++ S+ + L    + + +H   ++ G      +  N
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT-N 448

Query: 386 AVVDMYAKLGIINSACAVFEGLP--VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           A++ MYAK G IN A  VF+ LP   K+++SW ++I   AQ+GL  EAI +F+ M     
Sbjct: 449 ALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG- 506

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDA 502
           + P+  TYV +L A +HVG + QG K +  + + + +   +    C++D+YG+ G + +A
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML--DEGVRPDHITFVSLLTAC 559
                 +P    ++ W ++++   IH   D A     ++L  D G    ++   ++ +AC
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 192/429 (44%), Gaps = 48/429 (11%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K + +   L++ Y   G    +   F+ +  R++ +WNSMIS Y + G   EA+  F +
Sbjct: 205 VKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSK 264

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                 L+PD +T   +L AC NL     GK+IH  +L+   E    V  +L+ MY + G
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324

Query: 193 -------------------------------LANV--ARKLFDDMPVRDSGSWNAMISGY 219
                                          L NV  AR++F+ +  RD  +W AMI GY
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q+G   +AL++   M  EG   +  T+A++L V +    +  G  IH   +K G     
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444

Query: 280 FVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            V+N LI MYAK G +  A RVFD    ++++VSW S+I A  Q      A   F  M  
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G++PD +T V + S    +      R  +  +         +     ++D+Y + G++ 
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564

Query: 399 SACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVS 453
            A    E +P++ D I+W +L+     +    LA  A E   +      I+P N G Y++
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL------IDPGNSGAYLA 618

Query: 454 ILPAYSHVG 462
           +   YS  G
Sbjct: 619 LANVYSACG 627



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 198/478 (41%), Gaps = 95/478 (19%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A IL    R  +  +G  +H  I+K GL   +++ NNL+  YAK G +R A  VFD+M  
Sbjct: 14  AHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPL 73

Query: 308 RDVVSWNSIIAAY-EQSN--------------DPIT----------------AHGFFTTM 336
           +   SWN++I+ Y +Q N              DP++                A   F  M
Sbjct: 74  KSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKM 133

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG--------------------- 375
               + P   T+ ++ S  A        R +H F+++ G                     
Sbjct: 134 ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDP 193

Query: 376 ---------WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
                      ++++   NA++ +Y + G    A + FE +P +D++SWN++I+GY+Q G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK---------- 476
              EA+ +F  M     + P+  T  SIL A +++  L  G +IHA +++          
Sbjct: 254 YNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313

Query: 477 NCLC-----------------------FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           N L                         ++   T L+D Y K G +  A  +F ++    
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V W A+I  +  +G  + AL  FR M++EG  P+  T  ++L+  S   ++  G++  H
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ-IH 432

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               + G          ++ ++ + G++ +A         + +   W +++ A   HG
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 107/213 (50%), Gaps = 11/213 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWN 114
           S T L H K++HA  + +G+  T   +  L+  YA  G+++ ++  FD  +  + + +W 
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKL 172
           SMI    + G   EA++ F +  L+ G++PD  T+  VL AC +  LV+  + + +++  
Sbjct: 481 SMIMALAQHGLGKEAINLFERM-LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTE 539

Query: 173 GFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEAL 229
             E +  ++  A ++ +Y R GL   A    + MP+  D+ +W ++++  C+     +  
Sbjct: 540 VHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLAS-CKIHKNADLA 598

Query: 230 DILDEMRL---EGVSMDPITVASILPVCARSDN 259
            +  E  L    G S   + +A++   C + +N
Sbjct: 599 KVAAERLLLIDPGNSGAYLALANVYSACGKWEN 631


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/640 (39%), Positives = 383/640 (59%), Gaps = 6/640 (0%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDS--GSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           SL   Y R G  + A       P   S   +WNA+++   ++G+   AL +   +     
Sbjct: 49  SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALP-SSA 107

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T    L  CAR  ++ +   + +     G   ++FV + L+++Y++ G M  A+R
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  +D V+W++++A +  +  P+ A G ++ M++ G+  D + +V +        +
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGN 227

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R   SVHG  +R G  M DV+I  ++VDMYAK G  + A  VF  +P ++ +SWN LI+
Sbjct: 228 TRMGASVHGRFLRHGMRM-DVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALIS 286

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G+AQNG A EA+++F+ M     + P+ G  VS L A + VG L+ G  IH  +++  L 
Sbjct: 287 GFAQNGHADEALDLFREMSTSG-LQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LE 344

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
           F   + T ++DMY KCG ++ A  LF ++     V WNA+I+C G HG G  AL  F+++
Sbjct: 345 FQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQEL 404

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            + G++PDH TF SLL+A SHSGLV EG+ +F  M  EFGI+P  KH  C+VDL  R+G 
Sbjct: 405 NETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGL 464

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           +  A+  + +M   P   IW ALL  C  +  +ELG   + ++ E   E++G   L+SN+
Sbjct: 465 VEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNL 524

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA   KW+ V E+R L +D G KK PG+S IEV+     F   +++HP++++I   +  L
Sbjct: 525 YAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKL 584

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
           + +M+ +GYVP   FV  D++ED KE +L+ HSERLAIAFG++++ P + + I KNLRVC
Sbjct: 585 SFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVC 644

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GDCH+  K+IS+I +REI+VRD+ RFHHFKDG CSCGDYW
Sbjct: 645 GDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 247/480 (51%), Gaps = 31/480 (6%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF--DHISYRNVYTWNS 115
           T +  + RLHALLVVS   + +F S  L   YA +G L  +  T      S   +  WN+
Sbjct: 26  TTVAALTRLHALLVVSSS-QNLFPS--LAAAYARVGALDAAESTLAASPSSRSCIPAWNA 82

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           +++   R G    A+  F    L S  RPD  TF   L AC  L D    + +       
Sbjct: 83  LLAARSRAGSPGAALRVFR--ALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAA 140

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G+  DVFV ++LLH+Y R G    A ++FD MP +D  +W+ M++G+  +G  VEAL + 
Sbjct: 141 GYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMY 200

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             MR  GV+ D + +  ++  C  + N   G  +H   ++HG+  ++ ++ +L++MYAK 
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G    A +VF  M  R+ VSWN++I+ + Q+     A   F  M  +G+QPD   LVS  
Sbjct: 261 GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A +   +  +S+HGFI+RR  F    I+G AV+DMY+K G + SA  +F  L  +D+
Sbjct: 321 LACADVGFLKLGKSIHGFILRRLEF--QCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 378

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           + WN +I     +G   +A+ +FQ + E   I P+  T+ S+L A SH G + +G     
Sbjct: 379 VLWNAMIACCGTHGCGHDALALFQELNETG-IKPDHATFASLLSALSHSGLVEEGKFWFD 437

Query: 473 RVI---------KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
           R+I         K+C+        C+VD+  + G +++A  +   +    ++P W A++S
Sbjct: 438 RMITEFGIEPTEKHCV--------CVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLS 489


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/764 (36%), Positives = 436/764 (57%), Gaps = 15/764 (1%)

Query: 64  KRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           ++LH L V  G  +  V   T LV+ Y   G +   R  F+ +  RNV TW S+++ YV+
Sbjct: 119 EQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQ 178

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVD-GKKIHCSVLKLGFEWDVF 179
               S+ +  F++     G+ P+ +TF  VL A   +  VD G+++H   +K G    VF
Sbjct: 179 GRACSDVMALFFRMR-AEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVF 237

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SL++MY + GL   A+ +F  M  RD  SWN +++G   + + +EAL +  + R   
Sbjct: 238 VCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASM 297

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             +   T ++++ +CA    +     +H  ++KHG   +  V   +++ Y+K G +  A 
Sbjct: 298 AKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAF 357

Query: 300 RVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQ 357
            +F  M   ++VVSW ++I    Q+ D   A   F+ M++  ++P+  T  + LT+ +  
Sbjct: 358 NIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI 417

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L        +H  I++   +     +G A++  Y+KLG    A ++F+ +  KDV++W+ 
Sbjct: 418 LLP-----QIHAQIIKTN-YQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSA 471

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHARVIK 476
           +++ Y+Q G    A  VF  M     + PN+ T  S + A  S    + QG + HA  IK
Sbjct: 472 MLSCYSQAGDCDGATNVFIKMS-MQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIK 530

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
                 + V + LV MY + G ID A  +F +      V WN++IS +  HG   +AL+ 
Sbjct: 531 YRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDT 590

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           FRQM   G+  D  TF++++  C+H+GLV EGQ+YF  M  +  I P ++HY CMVDL+ 
Sbjct: 591 FRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYS 650

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG L    N I+ MP    A +W  LLGACR+H N+ELG +A+ +L  ++ ++   YVL
Sbjct: 651 RAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVL 710

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  G+W+  DEVR L   + +KK  G S I++ NKV  F   +++HP  E+IY +
Sbjct: 711 LSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAK 770

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L+ +T ++K  GY P+ S VL D+ E++KE +L  HSERLA+AFG+I++PP++P+QI KN
Sbjct: 771 LKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKN 830

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH   K +S I +REII+RD +RFHHF  G CSCGD+W
Sbjct: 831 LRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 271/566 (47%), Gaps = 19/566 (3%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS----MISVYVRCGR-LSEAV 130
           +  + S+ +L +  A+  +   +R   D +  R+    +S     I  Y R G+   EA+
Sbjct: 26  LSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEAL 85

Query: 131 DCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFE-WDVFVAASLLH 186
           D F         R        VLK C    + V G+++HC  +K GF+  +V V  +L+ 
Sbjct: 86  DHFVDVHRCG--RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVD 143

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY + G     R +F+ MP R+  +W ++++GY Q     + + +   MR EGV  +P T
Sbjct: 144 MYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFT 203

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
             S+L   A    +  G  +H   VK G    +FV N+LINMY+K G++  A  VF QM 
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME 263

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            RD+VSWN+++A    +   + A   F   + +  +    T  ++  + A L     +R 
Sbjct: 264 TRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQ 323

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQN 425
           +H  +++ G F  D  +  A++D Y+K G ++ A  +F  +P  ++V+SW  +I G  QN
Sbjct: 324 LHSCVLKHG-FHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQN 382

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
                A  +F  M E N + PN+ TY ++L A   +  L Q   IHA++IK        V
Sbjct: 383 ADIPLAAALFSRMREDN-VKPNEFTYSTVLTASIPI-LLPQ---IHAQIIKTNYQHAPSV 437

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            T L+  Y K G  ++A+S+F  +     V W+A++SC+   G  D A N F +M  +G+
Sbjct: 438 GTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGM 497

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +P+  T  S + AC+      +  R FH +  ++  +  +     +V ++ R G +  A 
Sbjct: 498 KPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSAR 557

Query: 606 NFIQNMPVRPDASIWGALLGACRIHG 631
              +    R D   W +++     HG
Sbjct: 558 IVFERQTDR-DLVSWNSMISGYAQHG 582



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 2/283 (0%)

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           +   +H   ++ G+   +V +G A+VDMY K G +     VFEG+P ++V++W +L+TGY
Sbjct: 117 SGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGY 176

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            Q    S+ + +F  M     + PN  T+ S+L A +  GA+  G ++HA+ +K      
Sbjct: 177 VQGRACSDVMALFFRMRA-EGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST 235

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           VFV   L++MY KCG +++A ++F Q+     V WN +++   ++    +AL  F     
Sbjct: 236 VFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRA 295

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
              +    T+ +++  C++   ++   R  H    + G          ++D + + G L 
Sbjct: 296 SMAKLSQSTYSTVIKLCANLKQLALA-RQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELD 354

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
            A N    MP   +   W A++G C  + ++ L A    R+ E
Sbjct: 355 DAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/644 (41%), Positives = 378/644 (58%), Gaps = 39/644 (6%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN M+ GY  S + V AL +   M   G+  +  T   +L  CA+S     G  IH +++
Sbjct: 34  WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS------------------- 312
           K G E +L+V  +LI+MYA+ G +  A +VFD+   RDVVS                   
Sbjct: 94  KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153

Query: 313 ------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
                       WN++I+ Y ++     A   F  M +  ++PD  T+V++ S  AQ   
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R VH +I   G F  ++ I NA++D+Y+K G + +AC +FEGL  KDV+SWNTLI 
Sbjct: 214 VELGRQVHSWIDDHG-FGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIG 272

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY    L  EA+ +FQ M    E +PN  T VSILPA +H+GA+  G  IH  + K    
Sbjct: 273 GYTHMNLYKEALLLFQEMLRSGE-SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLK- 330

Query: 481 FDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
            DV  A    T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ +   + 
Sbjct: 331 -DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDL 389

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F +M   G+ PD ITFV LL+ACSHSG +  G+  F  M +++ I P L+HYGCM+DL G
Sbjct: 390 FSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLG 449

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
            +G    A   I+ MP+ PD  IW +LL ACR HGN+EL    +  L +V+ EN G YVL
Sbjct: 450 HSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVL 509

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  G+W+ V +VR+L   +G+KK PG SSIE++++V  F  G++ HP+  +IY  
Sbjct: 510 LSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGM 569

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  + A ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I KN
Sbjct: 570 LEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 629

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVC +CH  TK +S+I +REII RD  RFHHF+DG+CSC D+W
Sbjct: 630 LRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 253/499 (50%), Gaps = 53/499 (10%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RN 158
           F  I   N   WN+M+  Y        A+   Y   ++ GL P+ YTFP +LK+C   + 
Sbjct: 23  FATIQEPNQLIWNTMLRGYALSSDPVSALK-LYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL------------------------- 193
             +G++IH  VLKLG+E D++V  SL+ MY + G                          
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 194 ----ANV--ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 247
                N+  A+++FD++PV+D  SWNAMISGY ++G+  EAL++  EM    V  D  T+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
            ++L  CA+S ++  G  +H +I  HG   NL + N LI++Y+K G +  A  +F+ +  
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           +DVVSWN++I  Y   N    A   F  M ++G  P+ +T+VS+    A L      R +
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321

Query: 368 HGFIMRRGWFMEDVI----IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
           H +I ++   ++DV     +  +++DMYAK G I +A  VF  +  K + SWN +I G+A
Sbjct: 322 HVYIDKK---LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 378

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            +G A+   ++F  M + N I P+  T+V +L A SH G L  G  I   + ++   +D+
Sbjct: 379 MHGRANAGFDLFSRMRK-NGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQD---YDI 434

Query: 484 FVAT----CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFR 538
                   C++D+ G  G   +A  +   +P     V W +++     HG  + A +F R
Sbjct: 435 TPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFAR 494

Query: 539 QMLDEGVRPDHITFVSLLT 557
            ++   V P++     LL+
Sbjct: 495 NLMK--VEPENPGSYVLLS 511



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 186/379 (49%), Gaps = 39/379 (10%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F    +A+ VF  + E + + WN+++  Y  S+DP++A   +  M   G+ P+  T   L
Sbjct: 13  FDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFL 72

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFME------------------------------DV 381
               A+       + +HG +++ G+  +                              DV
Sbjct: 73  LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A++  YA  G I SA  +F+ +PVKDV+SWN +I+GYA+ G   EA+E+F+ M + 
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N + P++GT V++L A +   ++  G ++H+ +  +    ++ +   L+D+Y KCG+++ 
Sbjct: 193 N-VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  +     V WN +I  +       +AL  F++ML  G  P+ +T VS+L AC+H
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311

Query: 562 SGLVSEGQRYFHMM----QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
            G +  G R+ H+      ++    P L+    ++D++ + G +  AH    +M +    
Sbjct: 312 LGAIDIG-RWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSL 367

Query: 618 SIWGALLGACRIHGNMELG 636
           S W A++    +HG    G
Sbjct: 368 SSWNAMIFGFAMHGRANAG 386



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 196/402 (48%), Gaps = 9/402 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G++  ++  FD I  ++V +WN+MIS Y   G   EA++ F + 
Sbjct: 130 RDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEM 189

Query: 137 TLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   VL AC   R++  G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 190 -MKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQ 248

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +  +D  SWN +I GY       EAL +  EM   G S + +T+ SILP 
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPA 308

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVS--NNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   +     S   +LI+MYAK G +  A +VF+ M+ + + 
Sbjct: 309 CAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 368

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +            F+ M++ GI+PD +T V L S  +        R +   +
Sbjct: 369 SWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSM 428

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            +       +     ++D+    G+   A  + + +P++ D + W +L+    ++G    
Sbjct: 429 TQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLEL 488

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           A    + + +    NP  G+YV +   Y+  G   +  K+ A
Sbjct: 489 AESFARNLMKVEPENP--GSYVLLSNIYATAGEWDEVAKVRA 528


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/712 (36%), Positives = 420/712 (58%), Gaps = 17/712 (2%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVL 170
           ++++S   + G+++ A+D      L      D      V+++C  L    +G++IH  + 
Sbjct: 7   STLLSKRQQLGQIAAAID-----ALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIR 61

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           ++G   DV+V+  L+ MY + G    AR +F+  P ++  SW  +I+   Q G + EAL 
Sbjct: 62  RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALA 121

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNIL-SGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +  EM  +G+    ++  + +  C+     L +G  +H  + ++G +  +  + +L++MY
Sbjct: 122 LFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMY 181

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  +++ F+ M E + VSWN++IAA+ +    + A      M   GI+   +T +
Sbjct: 182 SKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYI 241

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           +L S   Q +  +++R +H  I+R G F +DV+  N +++MY K G +  A A+F+ +  
Sbjct: 242 TLMSAYDQPSQLKSARYIHDCILRTG-FDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQ 298

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            DVI+WNT+I  Y+Q+G  SEA+  +++M+E   + P+  TYVS++ A + +G +  G +
Sbjct: 299 PDVIAWNTMIAAYSQHGHTSEALRFYELMQE-EGVVPDDYTYVSVIDACATLGDMEVGKQ 357

Query: 470 IHARVIKNCLCFDVF-VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +H R+      F V  +A  LV+MYGKCG +D A S+F +  + S V WNA+I  +  H 
Sbjct: 358 VHRRLGDRA--FQVTELANSLVNMYGKCGILDVARSIFDKTAKGS-VTWNAMIGAYAQHS 414

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
              +A   F  M  +G  P +ITF+S+L+AC+++GL  E   YF  MQ++ G++P   HY
Sbjct: 415 HEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHY 474

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
           GCMV+  G+AG L  A   IQ MP  PD   W + L  CR HG+M+ G  A+     +D 
Sbjct: 475 GCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDP 534

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           E    YV ++ I+A+ G ++    +R L  DRG++K  G S I++   V  F  G++++P
Sbjct: 535 EASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNP 594

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           + ++I+DEL+ L  +MK  GY PD + V  DVE  +KE +L +HSERLAIAFGIIS+   
Sbjct: 595 RSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQG 654

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +P++I KNLRVCGDCH  TK  S+IT REIIVRDSNRFHHFK+G CSC D+W
Sbjct: 655 TPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/532 (30%), Positives = 264/532 (49%), Gaps = 32/532 (6%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLH 67
           RRL  LL   Q      +AA ++LQ   D    E   +      QSC +L  +   +R+H
Sbjct: 4   RRLSTLLSKRQ-QLGQIAAAIDALQKRKDADLKECVRV-----IQSCARLGALAEGRRIH 57

Query: 68  ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
            L+   G    V+ S  LV  Y   G L  +R  F+    +NV++W  +I+V  + GR  
Sbjct: 58  QLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQ 117

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFVAAS 183
           EA+  FY+  L  G++P   +F   + AC      L  G+ +H  + + GF+  V    S
Sbjct: 118 EALALFYEM-LKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTS 176

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+ MY + G    + K F+ M   ++ SWNAMI+ + +    +EAL  L +M LEG+   
Sbjct: 177 LVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRAC 236

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            +T  +++    +   + S   IH  I++ G  F+  V N ++NMY K G ++ A  +F 
Sbjct: 237 SVTYITLMSAYDQPSQLKSARYIHDCILRTG--FDQDVVNVILNMYGKCGCLQDAEAMFK 294

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            M + DV++WN++IAAY Q      A  F+  MQ+ G+ PD  T VS+    A L D   
Sbjct: 295 SMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEV 354

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + VH  +  R + + +  + N++V+MY K GI++ A ++F+    K  ++WN +I  YA
Sbjct: 355 GKQVHRRLGDRAFQVTE--LANSLVNMYGKCGILDVARSIFDK-TAKGSVTWNAMIGAYA 411

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q+    +A E+F +M    E  P+  T++S+L A ++ G   +    H+  +  C+  D 
Sbjct: 412 QHSHEQQAFELFLLMRLDGE-EPSYITFMSVLSACANAGLPEEA---HSYFV--CMQQDH 465

Query: 484 FVAT------CLVDMYGKCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHG 528
            V        C+V+  GK GR+ DA +L   +P    V  W + ++    HG
Sbjct: 466 GVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHG 517


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/615 (41%), Positives = 369/615 (60%), Gaps = 24/615 (3%)

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL+    MR   + +D   + S+L  C++      G  IH + VK+GL  ++FV N L+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSII----------------------AAYEQSND 325
           MY++ G +  A  +FD+M ERDVVSW+++I                      A Y + ND
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
                  F  M +  + P+ +T++SL      +   +  + +H +I+R G+ M  + +  
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM-SLALAT 271

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+VDMY K G I SA A+F+ +  KDV++W  +I+ YAQ      A ++F  M + N + 
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD-NGVR 330

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN+ T VS+L   +  GAL  G   HA + K  +  DV + T L+DMY KCG I  A  L
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F +        WN +++ +G+HG G+KAL  F +M   GV+P+ ITF+  L ACSH+GLV
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG+  F  M  +FG+ P ++HYGCMVDL GRAG L  A+  I++MPV P+ +IWGA+L 
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           AC+IH N  +G +A+  L  ++ +N GY VLMSNIYA   +W  V  +R   +D G+KK 
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE 570

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PG SSIEVN  V  F  G+  HP  EKI + L  ++ K+K  GY+PD S VL +++E+EK
Sbjct: 571 PGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEK 630

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           E  L  HSE+LA+AFG+IS+ P +PI++ KNLR+C DCH  TK +S+I +R IIVRD NR
Sbjct: 631 ETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNR 690

Query: 806 FHHFKDGICSCGDYW 820
           FHHF++G CSCG YW
Sbjct: 691 FHHFREGSCSCGGYW 705



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 227/451 (50%), Gaps = 31/451 (6%)

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           Y +     +  D +  P VLKAC  +     GK+IH   +K G   DVFV  +L+ MY  
Sbjct: 97  YTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSE 156

Query: 191 FGLANVARKLFDDMPVRDSGSWN----------------------AMISGYCQSGNAVEA 228
            G    AR LFD M  RD  SW+                      AMI+GY +  +  E 
Sbjct: 157 CGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEG 216

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
             +   M  E V  + IT+ S++  C     +  G  +H YI+++G   +L ++  L++M
Sbjct: 217 ERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDM 276

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G +R A  +FD M  +DV++W ++I+AY Q+N    A   F  M+  G++P+ LT+
Sbjct: 277 YGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTM 336

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           VSL S+ A        +  H +I ++G  + DVI+  A++DMYAK G I+ A  +F    
Sbjct: 337 VSLLSLCAVNGALDMGKWFHAYIDKQGVEV-DVILKTALIDMYAKCGDISGAQRLFSEAI 395

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            +D+ +WN ++ GY  +G   +A+++F  ME    + PN  T++  L A SH G + +G 
Sbjct: 396 DRDICTWNVMMAGYGMHGYGEKALKLFTEMETLG-VKPNDITFIGALHACSHAGLVVEGK 454

Query: 469 KIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGI 526
            +  ++I +  L   V    C+VD+ G+ G +D+A  +   +P + ++  W A+++   I
Sbjct: 455 GLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKI 514

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           H   +      R++L   + P +  +  L++
Sbjct: 515 HKNSNMGELAARELL--ALEPQNCGYKVLMS 543



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 181/384 (47%), Gaps = 27/384 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV-- 121
           K +H   V +G +  VF    L+  Y+  G L  +R  FD +S R+V +W++MI  Y+  
Sbjct: 129 KEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITL 188

Query: 122 --------------------RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---N 158
                               RC  L E    F +  +   + P+  T   ++ +C     
Sbjct: 189 FYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRM-IEENVFPNDITMLSLIISCGFVGA 247

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           +  GK++H  +L+ GF   + +A +L+ MY + G    AR +FD M  +D  +W AMIS 
Sbjct: 248 VQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISA 307

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y Q+     A  +  +MR  GV  + +T+ S+L +CA +  +  G   H YI K G+E +
Sbjct: 308 YAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVD 367

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           + +   LI+MYAK G +  A R+F + ++RD+ +WN ++A Y        A   FT M+ 
Sbjct: 368 VILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMET 427

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G++P+ +T +      +        + +   ++     +  V     +VD+  + G+++
Sbjct: 428 LGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLD 487

Query: 399 SACAVFEGLPVKDVIS-WNTLITG 421
            A  + E +PV   I+ W  ++  
Sbjct: 488 EAYKMIESMPVTPNIAIWGAMLAA 511


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 274/686 (39%), Positives = 409/686 (59%), Gaps = 11/686 (1%)

Query: 144 PDFYT---FPPVLKACRNLVD---GKKIHCS-VLKLGFEWDVFVAASLLHMYCRFGLANV 196
           PD  T      +L++C    D   G+ +H   VL        F+A  L+ MY        
Sbjct: 15  PDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLAS 74

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A +LF  MP R++ SW  ++SG  Q+    +AL     MR  GV+     ++S     A 
Sbjct: 75  ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 134

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
               L G  +H   V+ G +  LFV++NL +MY+K G++  A RVFDQM ++D V+W ++
Sbjct: 135 LGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAM 194

Query: 317 IAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           I  Y ++     A   F  M++ G +  D     S+ S    L D   S+S+H  + + G
Sbjct: 195 IDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAG 254

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEV 434
           + +E V + NA++DMYAK   + SA  V +  P   +V+S  ++I GY +     EA+ +
Sbjct: 255 FELE-VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 313

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           +  +     + PN+ T+ S++   +    L QG ++HA+VIK  L  D FV + LVDMYG
Sbjct: 314 YVELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYG 372

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           KCG I  +M LF ++   + + WNA+I+    HG G +A+  F +M+  G+RP+HI FVS
Sbjct: 373 KCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVS 432

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           LLTACSH+GLV EG +YF+ M+E  GI+P  +HY C++D +GRAG L  A+ FI  MP++
Sbjct: 433 LLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIK 492

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P+A  W +LLGACR+ G+ ELG VA+  L +++  N G +V +S IYA++G+WE V  VR
Sbjct: 493 PNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVR 552

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
            L RD  +KK PG+S ++ N K  +F + + +HP+ + IY++L  LT ++K  GY+PD S
Sbjct: 553 KLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTS 612

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
           F+  ++E+  KE IL  HSER+A+AF +IS P   PI + KNLR+C DCH   KFI ++ 
Sbjct: 613 FLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVE 672

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
            R+IIVRD++RFHHF +G CSCGDYW
Sbjct: 673 RRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 247/498 (49%), Gaps = 20/498 (4%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFD 103
           +    L QSC +   ++R   LHA LV+SG    + F +  L+  Y++  DL+ +   F 
Sbjct: 21  VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY---TFPPVLKACRNLV 160
            +  RN  +W +++S   +   +       +     +G+ P  +   +      A    +
Sbjct: 81  AMPRRNAVSWTTLVSGLSQ-NLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPL 139

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G ++HC  ++LGF+ ++FVA++L  MY + GL + A ++FD MP +D+ +W AMI GY 
Sbjct: 140 PGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYA 199

Query: 221 QSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLL---IHLYIVKHGLE 276
           ++G+   A+    +M+ EG V  D     S+L     S  +  G L   IH  + K G E
Sbjct: 200 KNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFE 256

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             + V N LI+MYAK   +  A RV        +VVS  S+I  Y +++    A   +  
Sbjct: 257 LEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVE 316

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           +++ G++P+  T  S+    A          +H  +++    + D  +G+ +VDMY K G
Sbjct: 317 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD-LIRDSFVGSTLVDMYGKCG 375

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           +I+ +  +F  +  +  I+WN +I  +AQ+G   EAI+ F  M     I PN   +VS+L
Sbjct: 376 LISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG-IRPNHIAFVSLL 434

Query: 456 PAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSS 513
            A SH G + +G+K  ++    + +       +C++D YG+ GR+D+A     ++P + +
Sbjct: 435 TACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPN 494

Query: 514 SVPWNAIISCHGIHGQGD 531
           +  W +++    + G  +
Sbjct: 495 AYGWCSLLGACRMRGSKE 512



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 31/415 (7%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH + V  G    +F ++ L + Y+  G LS +   FD +  ++   W +MI  Y + G
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVA 181
            L  AV  F        +  D + F  VL A   L DG   K IHC V K GFE +V V 
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 262

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWN-----AMISGYCQSGNAVEALDILDEMR 236
            +L+ MY +      A ++       D G WN     +MI GY ++    EAL I  E+R
Sbjct: 263 NALIDMYAKSMDVESASRVLKI----DPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 318

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            +GV  +  T +S++  CA    +  G  +H  ++K  L  + FV + L++MY K G++ 
Sbjct: 319 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 378

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            ++++F+++  R  ++WN++I  + Q      A   F  M  +GI+P+ +  VSL +  +
Sbjct: 379 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 438

Query: 357 Q-------LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                   L    + +  HG   +   +       + ++D Y + G ++ A      +P+
Sbjct: 439 HAGLVDEGLKYFYSMKEAHGIEPKEEHY-------SCIIDTYGRAGRLDEAYKFISEMPI 491

Query: 410 K-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           K +   W +L+      G + E  EV    +   ++ P N G +VS+   Y+ +G
Sbjct: 492 KPNAYGWCSLLGACRMRG-SKELGEV--AAQNLMKLEPGNTGIHVSLSGIYASLG 543



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)

Query: 36  ISPDCLEN-------------ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTV 79
           I  DC+E              E  E  F  + + C     L    +LHA ++ +  I+  
Sbjct: 302 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 361

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F  + LV+ Y   G +S S   F+ I YR    WN++I+V+ + G   EA+  F +  + 
Sbjct: 362 FVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM-IY 420

Query: 140 SGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLAN 195
           SG+RP+   F  +L AC +  LVD G K   S+ +  G E      + ++  Y R G  +
Sbjct: 421 SGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLD 480

Query: 196 VARKLFDDMPVRDSG-SWNAMISGYCQSGNAVEALDILDE--MRLE 238
            A K   +MP++ +   W +++ G C+   + E  ++  +  M+LE
Sbjct: 481 EAYKFISEMPIKPNAYGWCSLL-GACRMRGSKELGEVAAQNLMKLE 525


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/646 (39%), Positives = 378/646 (58%), Gaps = 38/646 (5%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           +W ++I  +       +AL    EMR  G   D     S+L  C    ++  G  +H +I
Sbjct: 72  AWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHAL------------------------------- 299
           V+ G++ +L+  N L+NMYAK   M   +                               
Sbjct: 132 VRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG 191

Query: 300 -----RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
                RVF+ M  +DVVS+N+IIA Y QS     A      M    ++PD  TL S+  I
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            ++  D    + +HG+++R+G    DV IG+++VDMYAK   I  +  VF  L  +D IS
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN+L+ GY QNG  +EA+ +F+ M    ++ P    + S++PA +H+  L  G ++H  V
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           ++     ++F+A+ LVDMY KCG I  A  +F ++     V W AII  H +HG G +A+
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F +M  +GV+P+ + FV++LTACSH GLV E   YF+ M + +G+   L+HY  + DL
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A+NFI  M V P  S+W  LL +C +H N+EL    ++++F VDSEN+G Y
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VLM N+YA+ G+W+ + ++R   R +GL+K P  S IE+ NK   F +G+R+HP  +KI 
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 609

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
           + L+ +  +M+  GYV D S VL DV+E+ K  +L  HSERLA+AFGII++ P + I++ 
Sbjct: 610 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 669

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KN+R+C DCH   KFIS+ITEREIIVRD++RFHHF  G CSCGDYW
Sbjct: 670 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 263/509 (51%), Gaps = 49/509 (9%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
             K+LHA  + +  +    S++ +++ Y NL  L  +   F  +    V  W S+I  + 
Sbjct: 23  QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
                S+A+  F +    SG  PD   FP VLK+C  ++D   G+ +H  +++LG + D+
Sbjct: 82  DQSLFSKALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 179 FVAASLLHMYCR-------------------------------------FGLANVARKLF 201
           +   +L++MY +                                     FG+ +V R++F
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV-RRVF 199

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           + MP +D  S+N +I+GY QSG   +AL ++ EM    +  D  T++S+LP+ +   +++
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  IH Y+++ G++ ++++ ++L++MYAK   +  + RVF ++  RD +SWNS++A Y 
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q+     A   F  M  A ++P  +   S+    A L      + +HG+++ RG F  ++
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL-RGGFGSNI 378

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            I +A+VDMY+K G I +A  +F+ + V D +SW  +I G+A +G   EA+ +F+ M+  
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR- 437

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRID 500
             + PNQ  +V++L A SHVG + +       + K   L  ++     + D+ G+ G+++
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497

Query: 501 DAMSLFYQ--VPRSSSVPWNAIISCHGIH 527
           +A +   +  V  + SV W+ ++S   +H
Sbjct: 498 EAYNFISKMCVEPTGSV-WSTLLSSCSVH 525



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 194/389 (49%), Gaps = 15/389 (3%)

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
           R  F+ +  ++V ++N++I+ Y + G   +A+    +   T+ L+PD +T   VL     
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG-TTDLKPDSFTLSSVLPIFSE 254

Query: 159 LVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
            VD   GK+IH  V++ G + DV++ +SL+ MY +      + ++F  +  RD  SWN++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           ++GY Q+G   EAL +  +M    V    +  +S++P CA    +  G  +H Y+++ G 
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             N+F+++ L++MY+K G ++ A ++FD+M   D VSW +II  +        A   F  
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M++ G++P+ +  V++ +  + +     +      + +     +++    AV D+  + G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494

Query: 396 IINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQGT 450
            +  A      + V+   S W+TL++    +    LA +  E +F +  E      N G 
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE------NMGA 548

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCL 479
           YV +   Y+  G  ++  K+  R+ K  L
Sbjct: 549 YVLMCNMYASNGRWKEMAKLRLRMRKKGL 577



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 9/178 (5%)

Query: 48  IDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  +  +C     LH  K+LH  ++  G    +F ++ LV+ Y+  G++  +R  FD 
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG 162
           ++  +  +W ++I  +   G   EAV  F +     G++P+   F  VL AC +  LVD 
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDE 462

Query: 163 K-KIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
                 S+ K+ G   ++   A++  +  R G    A      M V  +GS W+ ++S
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 413/748 (55%), Gaps = 7/748 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S   +++ +   G LS +R  FD +  R   +W  +I  Y++  +  EA    Y  
Sbjct: 72  KNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFR-LYAD 130

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G+ PD+ T   +L     L       +IH  V+KLG+E+++ V  SL+  YC+   
Sbjct: 131 MRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
             +A +LF  M  +D+ ++N++++GY   G   EA+++  E+   G+     T A++L  
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               D+   G  +H +++K    +N+FV N L++ Y+K   +    ++F +M E D +S+
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISY 310

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N +I +Y  +     +   F  +Q            +L SI     + R  R +H   + 
Sbjct: 311 NVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAIT 370

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G   E  +  NA+VDMYAK      A  +F+ +  K  + W  +I+ Y Q G   E I 
Sbjct: 371 VGANFESRV-ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGIN 429

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           VF  M     +  +Q T+ SIL A +++ ++  G ++H+ +I++    +V+  + L+D Y
Sbjct: 430 VFSDMRRTG-VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTY 488

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG + DA+  F ++P  +SV WNA+IS +  +G  D  LN F+QM+  G +PD ++F+
Sbjct: 489 AKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFL 548

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L+ACSH G V E   +F+ M + + + P  +HY  MVD+  R G    A   +  MP 
Sbjct: 549 SVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPF 608

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEV-DSENVGYYVLMSNIYANVGKWEGVDE 672
            P   +W ++L +CRIH N EL   A+DRLF + D  +   Y+ MSNIYA  G+W+ V +
Sbjct: 609 EPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAK 668

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V+   RDRG++K P +S +E+ ++  +F   +++HP+ +KI  ++  L+ +M+  GY PD
Sbjct: 669 VKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPD 728

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            +  L DV+E  K   L  HSER AIAF ++++P  SPI + KNLR C DCH   K ISQ
Sbjct: 729 TTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQ 788

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I EREIIVRDS+RFHHFKDG+CSCGDYW
Sbjct: 789 IVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 240/501 (47%), Gaps = 35/501 (6%)

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD--------SG------ 210
           I   ++K GF  +   +   ++ +   G    A ++FD MP ++        SG      
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 211 -----------------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
                            SW  +I GY QS  + EA  +  +MR  G+  D +T+ ++L  
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               +     + IH +++K G E+NL V N+L++ Y K   +  A ++F  M+ +D V++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           NS++  Y        A   F  +  +GI+P   T  +L S    L+D +  + VHGF+++
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
              F+ +V +GNA++D Y+K   ++    +F  +P  D IS+N +IT YA NG   E+ +
Sbjct: 270 TN-FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFD 328

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F+ + +    +  Q  + ++L   +    LR G +IH + I     F+  V   LVDMY
Sbjct: 329 LFRKL-QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMY 387

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KC    +A  +F  +   S+VPW A+IS +   G+ ++ +N F  M   GV  D  TF 
Sbjct: 388 AKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFA 447

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L AC++   +S G R  H +    G   ++     ++D + + G +  A      MP 
Sbjct: 448 SILRACANLASISLG-RQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506

Query: 614 RPDASIWGALLGACRIHGNME 634
           R   S W AL+ A   +GN++
Sbjct: 507 RNSVS-WNALISAYAQNGNVD 526



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 239/491 (48%), Gaps = 17/491 (3%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           + ++H  ++  G    +     LV+ Y     L  +   F H+  ++  T+NS+++ Y  
Sbjct: 159 IVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSN 218

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
            G   EA++ F +    SG++P  +TF  +L A   L D   G+++H  VLK  F W+VF
Sbjct: 219 EGLNEEAIELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +LL  Y +    +   KLF +MP  D  S+N +I+ Y  +G   E+ D+  +++   
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTR 337

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
                   A++L +   S N+  G  IH   +  G  F   V N L++MYAK    + A 
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           ++FD +  +  V W ++I+AY Q          F+ M++ G+  D  T  S+    A L 
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                R +H  ++R G FM +V  G+A++D YAK G +  A   F  +P ++ +SWN LI
Sbjct: 458 SISLGRQLHSLLIRSG-FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALI 516

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + YAQNG     +  FQ M +     P+  +++S+L A SH G + + +     + +   
Sbjct: 517 SAYAQNGNVDGTLNSFQQMIQSG-YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ--- 572

Query: 480 CFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII-SC--HGIHGQGD 531
            ++V       T +VD+  + GR D+A  L  ++P   S + W++++ SC  H  H    
Sbjct: 573 IYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAK 632

Query: 532 KALNFFRQMLD 542
           KA +    M D
Sbjct: 633 KAADRLFNMED 643



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 187/406 (46%), Gaps = 35/406 (8%)

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ----------------- 304
           S  LI  +IVK G   N   SN  +N + + G + HA +VFDQ                 
Sbjct: 26  SNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHL 85

Query: 305 --------------MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
                         M+ER  VSW  +I  Y QSN    A   +  M++ GI+PD +TLV+
Sbjct: 86  KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           L S   +L        +H  +++ G +  ++++ N++VD Y K   +  A  +F+ +  K
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLG-YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D +++N+L+TGY+  GL  EAIE+F  +     I P+  T+ ++L A   +   + G ++
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSG-IKPSDFTFAALLSAAVGLDDTKFGQQV 263

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H  V+K    ++VFV   L+D Y K  ++D+   LF ++P    + +N +I+ +  +GQ 
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQF 323

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            ++ + FR++           F +LL+  + S  +  G R  H      G     +    
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMG-RQIHCQAITVGANFESRVENA 382

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +VD++ +      A     N+  +     W A++ A    G  E G
Sbjct: 383 LVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISAYVQKGKHEEG 427



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 54/319 (16%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  + ++C  L  +   ++LH+LL+ SG +  V+S + L++ YA  G ++ +  +F 
Sbjct: 443 QATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFG 502

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            +  RN  +WN++IS Y + G +   ++ F Q  + SG +PD  +F  VL AC       
Sbjct: 503 EMPERNSVSWNALISAYAQNGNVDGTLNSFQQM-IQSGYKPDSVSFLSVLSACS------ 555

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
             HC           FV  +L H        N   ++++  P R+   + +M+   C++G
Sbjct: 556 --HCG----------FVEEALWHF-------NSMTQIYEVTPKRE--HYTSMVDVLCRNG 594

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCA--RSDNILSGLLIHLYIVKHGLEFNLFV 281
              EA  ++ EM  E      I  +S+L  C   ++  +       L+ ++   +   ++
Sbjct: 595 RFDEAEKLMTEMPFEP---SEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDV-----VSW------NSIIAAYEQSNDPITA- 329
             N+ N+YA  G   +  +V   M +R V      SW        + +A ++S+  +   
Sbjct: 652 --NMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKI 709

Query: 330 ----HGFFTTMQQAGIQPD 344
               +     M++ G +PD
Sbjct: 710 LRKINALSKEMEKKGYKPD 728


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/654 (39%), Positives = 378/654 (57%), Gaps = 35/654 (5%)

Query: 201 FDDMP--VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
            +D P  +  S  WN +I+ Y +      AL++  ++R     +D     S+L  C +  
Sbjct: 79  LNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVS 138

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
               G  IH +++K GL+ ++FV N L+ MY +   + +A  VFD+MMERDVVSW+++I 
Sbjct: 139 WTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIR 198

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
           +  ++ +   A      M    ++P  + +VS+ ++ A   + R  +++H +++R     
Sbjct: 199 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 258

Query: 379 E-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG---------------- 421
              V    A++DMYAK G +  A  +F GL  K V+SW  +I G                
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318

Query: 422 ---------------YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
                          YAQ     +A  +F  M     + P + T VS+L   +  GAL  
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG-VRPTKVTIVSLLSLCAVAGALDL 377

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  +H+ + K  +  D  + T LVDMY KCG I+ A  LF +        WNAII+   +
Sbjct: 378 GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAM 437

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG G++AL+ F +M  +GV+P+ ITF+ LL ACSH+GLV+EG++ F  M   FG+ P ++
Sbjct: 438 HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE 497

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HYGCMVDL GRAG L  AH  I++MP++P+  +WGAL+ ACR+H N +LG +A+ +L E+
Sbjct: 498 HYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEI 557

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           + EN GY VLMSNIYA   +W     VR   +  G+KK PG S IEVN  V  F  G+++
Sbjct: 558 EPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQS 617

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP+  +I + L  +  K+   GYVPD S VL +++E+EKE  LT HSE+LA+AFG+IS+ 
Sbjct: 618 HPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTA 677

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P +PI+I KNLRVC DCH  TK +S+I  R IIVRD NRFHHF++G CSCGDYW
Sbjct: 678 PSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 183/698 (26%), Positives = 309/698 (44%), Gaps = 95/698 (13%)

Query: 1   MFRLAPSCKDRRLCKLLPL----LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQS 56
           M  +  S K +    LLPL    LQ H        ++L+ +P  L+         DL   
Sbjct: 3   MMTMMVSTKPQLTPSLLPLTIQQLQHH------PHSTLKFNPTPLQTPPTSPSQHDL--- 53

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
            + L   K++HA +     IKT F     +        LS S              WN +
Sbjct: 54  -STLEQTKQIHAHI-----IKTHFHHALQIPLNDFPSGLSPSAQ------------WNFV 95

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLG 173
           I+ Y +  +   A++ + Q         D +  P VLKAC  +     GK+IH  VLK G
Sbjct: 96  ITSYTKRNQPRNALNVYAQLR-KMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            + DVFV  +L+ MY        AR +FD M  RD  SW+ MI    ++     AL+++ 
Sbjct: 155 LDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIR 214

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV--SNNLINMYAK 291
           EM    V    + + S++ + A + N+  G  +H Y++++    ++ V  +  L++MYAK
Sbjct: 215 EMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK 274

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIA-------------------------------AY 320
            G +  A ++F+ + ++ VVSW ++IA                               AY
Sbjct: 275 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAY 334

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q+N    A   F  M+ +G++P  +T+VSL S+ A        + VH +I +    + D
Sbjct: 335 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV-D 393

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
            I+  A+VDMYAK G IN+A  +F     +D+  WN +ITG+A +G   EA+++F  ME 
Sbjct: 394 CILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMER 453

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRI 499
              + PN  T++ +L A SH G + +G K+  +++    L   +    C+VD+ G+ G +
Sbjct: 454 -QGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLL 512

Query: 500 DDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           D+A  +   +P + +++ W A+++   +H           Q+L+  + P++  +  L+  
Sbjct: 513 DEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE--IEPENCGYNVLM-- 568

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL-----GMAHNFIQNMPV 613
              S + +   R+     +  G++  +K  G    +    GH      G  H F+     
Sbjct: 569 ---SNIYAAANRW----SDAAGVRKTMKTVG----MKKEPGHSVIEVNGTVHEFLMGDQS 617

Query: 614 RPDASIWGALLGACRIHGNMELGAV--ASDRLFEVDSE 649
            P       +L   R   N E G V   S  L  +D E
Sbjct: 618 HPQIRRINEMLAEMRRKLN-EAGYVPDTSTVLLNIDEE 654


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/619 (41%), Positives = 376/619 (60%), Gaps = 5/619 (0%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           MP R+  SW AMISG  Q+    EA+     MR+ G        +S +  CA   +I  G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +H   +K G+   LFV +NL +MY+K G M  A +VF++M  +D VSW ++I  Y + 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            +   A   F  M    +  D   L S       L  C+  RSVH  +++ G F  D+ +
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFV 179

Query: 384 GNAVVDMYAKLGIINSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           GNA+ DMY+K G + SA  VF G+    ++V+S+  LI GY +     + + VF  +   
Sbjct: 180 GNALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR- 237

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             I PN+ T+ S++ A ++  AL QG ++HA+V+K     D FV++ LVDMYGKCG ++ 
Sbjct: 238 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 297

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A+  F ++   + + WN+++S  G HG G  A+  F +M+D GV+P+ ITF+SLLT CSH
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +GLV EG  YF+ M + +G+ P  +HY C++DL GRAG L  A  FI  MP  P+A  W 
Sbjct: 358 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 417

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           + LGACRIHG+ E+G +A+++L +++ +N G  VL+SNIYAN  +WE V  VR   RD  
Sbjct: 418 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 477

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +KK PG+S ++V  K  +F   + +HP+   IY++L  L  ++K+ GYVP    V  D++
Sbjct: 478 VKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMD 537

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           +  KE +L  HSER+A+AF +IS P   PI + KNLRVC DCH+  KFIS++T R+IIVR
Sbjct: 538 DSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVR 597

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D++RFHHF DG CSCGDYW
Sbjct: 598 DNSRFHHFTDGSCSCGDYW 616



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 218/430 (50%), Gaps = 15/430 (3%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKK 164
           RN+ +W +MIS   +  + SEA+  F    +  G  P  + F   ++AC +L     GK+
Sbjct: 4   RNLVSWTAMISGLSQNSKFSEAIRTFCGMRIC-GEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +HC  LK G   ++FV ++L  MY + G    A K+F++MP +D  SW AMI GY + G 
Sbjct: 63  MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EAL    +M  E V++D   + S L  C        G  +H  +VK G E ++FV N 
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182

Query: 285 LINMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           L +MY+K G M  A  VF    E R+VVS+  +I  Y ++         F  +++ GI+P
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 242

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           +  T  SL    A          +H  +M+   F ED  + + +VDMY K G++  A   
Sbjct: 243 NEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEQAIQA 301

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +     I+WN+L++ + Q+GL  +AI++F+ M +   + PN  T++S+L   SH G 
Sbjct: 302 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD-RGVKPNAITFISLLTGCSHAGL 360

Query: 464 LRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
           + +G+     + K    + V       +C++D+ G+ GR+ +A     ++P   ++  W 
Sbjct: 361 VEEGLDYFYSMDKT---YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 417

Query: 519 AIISCHGIHG 528
           + +    IHG
Sbjct: 418 SFLGACRIHG 427



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 44  ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  E  F  L ++C     L    +LHA ++     +  F S+ LV+ Y   G L  +  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            FD I       WNS++SV+ + G   +A+  F +  +  G++P+  TF  +L  C
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERM-VDRGVKPNAITFISLLTGC 355


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/741 (38%), Positives = 414/741 (55%), Gaps = 51/741 (6%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD----FYTFPPVLKACRNLVDGKK 164
           ++  WN  IS Y+R GR +EA+  F +    S +  +     Y      +  R L D   
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
               V      W+V +       Y R      AR+LF+ MP RD  SWN M+SGY Q+G 
Sbjct: 123 ERDLV-----SWNVMIKG-----YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             +A  + D M       + ++  ++L    ++  +    +    + K    + L   N 
Sbjct: 173 VDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACM----LFKSRENWALVSWNC 224

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF----------- 333
           L+  + K   +  A + FD M  RDVVSWN+II  Y QS     A   F           
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284

Query: 334 TTMQQAGIQPDLLTLV-SLTSIVAQLNDCRNSRSVHGFIMRRGWFME------------D 380
           T M    IQ  ++     L   + + N+   +  + G++  +G  ME            +
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV--QGERMEMAKELFDVMPCRN 342

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMME 439
           V   N ++  YA+ G I+ A  +F+ +P +D +SW  +I GY+Q+G + EA+ +F QM  
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           E   +  N+ ++ S L   + V AL  G ++H R++K       FV   L+ MY KCG I
Sbjct: 403 EGGRL--NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           ++A  LF ++     V WN +I+ +  HG G+ AL FF  M  EG++PD  T V++L+AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH+GLV +G++YF+ M +++G+ P+ +HY CMVDL GRAG L  AHN ++NMP  PDA+I
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WG LLGA R+HGN EL   A+D++F ++ EN G YVL+SN+YA+ G+W  V ++R   RD
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           +G+KK PG+S IE+ NK   F  G+  HP+ ++I+  L  L  +MK  GYV   S VL D
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           VEE+EKE ++  HSERLA+A+GI+      PI++ KNLRVC DCHN  K++++IT R II
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           +RD+NRFHHFKDG CSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 230/468 (49%), Gaps = 36/468 (7%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF--- 133
           + V S   +++ YA  G +  +R  FD +  +N  +WN+++S YV+  ++ EA   F   
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214

Query: 134 --YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
             +     + L   F     +++A R   D   +           DV    +++  Y + 
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMNVR----------DVVSWNTIITGYAQS 263

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G  + AR+LFD+ PV+D  +W AM+SGY Q+    EA ++ D+M       + ++  ++L
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAML 319

Query: 252 PVCARSDNI-LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
               + + + ++  L  +   +     N+   N +I  YA+ G +  A  +FD+M +RD 
Sbjct: 320 AGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSW ++IA Y QS     A   F  M++ G + +  +  S  S  A +      + +HG 
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           +++ G +     +GNA++ MY K G I  A  +F+ +  KD++SWNT+I GY+++G    
Sbjct: 435 LVKGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT--- 487
           A+  F+ M+    + P+  T V++L A SH G + +G +    + ++   + V   +   
Sbjct: 494 ALRFFESMKR-EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD---YGVMPNSQHY 549

Query: 488 -CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
            C+VD+ G+ G ++DA +L   +P    +  W  ++    +HG  + A
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 211/462 (45%), Gaps = 30/462 (6%)

Query: 26  LFSAAANSLQISPDCLENESRE----IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFS 81
           L SA   + ++   C+  +SRE    + ++ L     K   +         S  ++ V S
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD-SMNVRDVVS 252

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
              ++  YA  G +  +R  FD    ++V+TW +M+S Y++   + EA + F +    + 
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE 312

Query: 142 LRPDF----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           +  +     Y     ++  + L D   + C  +     W+  +       Y + G  + A
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFD--VMPCRNVST---WNTMITG-----YAQCGKISEA 362

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           + LFD MP RD  SW AMI+GY QSG++ EAL +  +M  EG  ++  + +S L  CA  
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  +H  +VK G E   FV N L+ MY K G +  A  +F +M  +D+VSWN++I
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y +      A  FF +M++ G++PD  T+V++ S  +        R     + +    
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIE 433
           M +      +VD+  + G++  A  + + +P + D   W TL+     +G   LA  A +
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602

Query: 434 -VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
            +F M  E      N G YV +   Y+  G      K+  R+
Sbjct: 603 KIFAMEPE------NSGMYVLLSNLYASSGRWGDVGKLRVRM 638



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 47/277 (16%)

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           K   + +  C   D+      +  Y + GR ++A+ +F ++PR SSV +N +IS +  +G
Sbjct: 50  KSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG 109

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           + + A    R++ DE    D +++  ++     +  + + +  F +M E       +  +
Sbjct: 110 EFELA----RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-----DVCSW 160

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL------------- 635
             M+  + + G +  A +    MP + D S W ALL A   +  ME              
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVS-WNALLSAYVQNSKMEEACMLFKSRENWAL 219

Query: 636 --------GAVASDRLFEV----DSENVGYYVLMSNI---YANVGKWEGVDEVRSLARDR 680
                   G V   ++ E     DS NV   V  + I   YA  GK   +DE R L  + 
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK---IDEARQLFDES 276

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
            ++    W+++         Y  NR   +  +++D++
Sbjct: 277 PVQDVFTWTAMVSG------YIQNRMVEEARELFDKM 307


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/677 (37%), Positives = 390/677 (57%), Gaps = 38/677 (5%)

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           +A   + +Y   G    AR LFD +P  D  +W  +IS   + G ++EA+   ++ R + 
Sbjct: 13  LALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKN 72

Query: 240 -VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V  D + + S+   CA   ++++   +H   ++ G   ++ + N LI+MY K      A
Sbjct: 73  CVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGA 132

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VF+ M  RDV+SW S+ + Y        A G F  M   G +P+ +T+ S+      L
Sbjct: 133 RLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDL 192

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D ++ R VHGF++R G    +V + +A+V+MYA    I  A  VF+ +  +D +SWN L
Sbjct: 193 KDLKSGREVHGFVVRNG-MGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251

Query: 419 ITGY-----------------------------------AQNGLASEAIEVFQMMEECNE 443
           IT Y                                    QNG   +A+EV   M+    
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG- 310

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
             PNQ T  S+LPA +++ +LR G +IH  + ++    D+   T LV MY KCG ++ + 
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F  + +  +V WN +I    +HG G++AL  FR+M+D GVRP+ +TF  +L+ CSHS 
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV EG   F  M  +  ++P   H+ CMVD+  RAG L  A+ FI+ MP+ P A  WGAL
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           LG CR++ N+ELG +A++RLFE++S+N G YVL+SNI  +   W    E R L RDRG+ 
Sbjct: 491 LGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVT 550

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K PG S I+V N+V  F  G++++ + ++IY  L  +  KM+  GY+P+  FVLQDV+++
Sbjct: 551 KNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQE 610

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EKE +L +HSE+LA+AFG+++   +S I++FKNLR+CGDCHN  KF+++I   +IIVRDS
Sbjct: 611 EKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDS 670

Query: 804 NRFHHFKDGICSCGDYW 820
            RFHHF+DG+CSC D+W
Sbjct: 671 LRFHHFRDGLCSCQDFW 687



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 239/478 (50%), Gaps = 42/478 (8%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           K +  Y+N GDL  +RH FD I   ++ TW  +IS   + GR  EA+  +  F   + + 
Sbjct: 16  KFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75

Query: 144 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD      V KAC   R++++ K++H   ++ GF  DV +  +L+ MY +   +  AR +
Sbjct: 76  PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLV 135

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F+ MP RD  SW +M S Y   G   EAL    +M L G   + +TV+SILP C    ++
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
            SG  +H ++V++G+  N+FVS+ L+NMYA    +R A  VFD M  RD VSWN +I AY
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255

Query: 321 -----------------------------------EQSNDPITAHGFFTTMQQAGIQPDL 345
                                               Q+     A    + MQ +G +P+ 
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T+ S+      L   R  + +HG+I R  WF +D+    A+V MYAK G +  +  VF 
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGYIFRH-WFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  +D +SWNT+I   + +G   EA+ +F+ M +   + PN  T+  +L   SH   + 
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSG-VRPNSVTFTGVLSGCSHSRLVD 433

Query: 466 QGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
           +G+ I   + ++  +  D    +C+VD+  + GR+++A     ++P   ++  W A++
Sbjct: 434 EGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALL 491



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 196/415 (47%), Gaps = 55/415 (13%)

Query: 55  QSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           ++C  L  V   KR+H   +  G    V     L++ Y        +R  F+ + +R+V 
Sbjct: 86  KACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVI 145

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +W SM S YV CG L EA+  F +  L +G RP+  T   +L AC +L D   G+++H  
Sbjct: 146 SWTSMASCYVNCGLLREALGAFRKMGL-NGERPNSVTVSSILPACTDLKDLKSGREVHGF 204

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS------------------- 209
           V++ G   +VFV+++L++MY        A+ +FD M  RD+                   
Sbjct: 205 VVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKG 264

Query: 210 ----------------GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
                            SWNA+I G  Q+G   +AL++L  M+  G   + IT+ S+LP 
Sbjct: 265 LSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPA 324

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C   +++  G  IH YI +H    +L  +  L+ MYAK G +  + RVF  M +RD VSW
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSW 384

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFI- 371
           N++I A     +   A   F  M  +G++P+ +T   +      L+ C +SR V  G + 
Sbjct: 385 NTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGV------LSGCSHSRLVDEGLLI 438

Query: 372 ---MRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI-SWNTLITG 421
              M R   +E D    + +VD+ ++ G +  A    + +P++    +W  L+ G
Sbjct: 439 FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 10/189 (5%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I    +  +CT L  +   K++H  +      + + ++T LV  YA  GDL  SR  F 
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD 161
            ++ R+  +WN+MI      G   EA+  F +  + SG+RP+  TF  VL  C +  LVD
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREM-VDSGVRPNSVTFTGVLSGCSHSRLVD 433

Query: 162 -GKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
            G  I  S+ +    E D    + ++ +  R G    A +    MP+   +G+W A++ G
Sbjct: 434 EGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493

Query: 219 YCQSGNAVE 227
            C+    VE
Sbjct: 494 -CRVYKNVE 501


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/758 (36%), Positives = 409/758 (53%), Gaps = 103/758 (13%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+ +HC ++K G    V++  +L+  Y + G    A  +FD+MP++ + SWN +ISGY +
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 222 SGNAVEALDILDEMR-------------------------------LEGVSMDPITVASI 250
            GN   +  +L EM                                 E V     TV+++
Sbjct: 89  QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM---- 306
           L  CA +  +  G  IH ++VK GL   + V+ +L+NMYAK G    A  VFD+M     
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 307 ---------------------------ERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQ 338
                                      +RD+VSWNS+I+ Y Q    + A   F+ M  +
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK----- 393
             ++PD  TL S+ S  A L      + +H +I+R        + GNA++ MYAK     
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV-GNALISMYAKSGGVE 327

Query: 394 ----------------------------LGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
                                       LG +  A  +F  L  +DV++W  +I GY QN
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 426 GLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           GL ++A+E+F++M   NE   PN  T  ++L   S +  L  G +IHA  IK        
Sbjct: 388 GLWNDALELFRLM--VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V   L+ MY K G I+ A  +F  +P  +   V W ++I     HG G +A+N F +ML 
Sbjct: 446 VTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G++PDHIT+V +L+AC+H GLV +G++Y++MM E   I+P L HY CM+DL+GRAG L 
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+ FI++MP+ PD   WG+LL +C+IH N +L  VA++RL  +D  N G Y+ ++N+Y+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             GKWE   + R L +DRG++K  G S I + N+V  F   +  HP+ ++IY  +  +  
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWE 684

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           ++K +G++PD   VL D+EE+ KE IL  HSE+LAIAFG++++P  + ++I KNLRVC D
Sbjct: 685 EIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCND 744

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  KFIS++  REIIVRD+ RFHHFKDG CSC DYW
Sbjct: 745 CHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 172/600 (28%), Positives = 276/600 (46%), Gaps = 107/600 (17%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H  ++  G    V+    L+ FYA  G L F+ H FD +  ++ ++WN++IS Y + 
Sbjct: 30  RSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQ 89

Query: 124 GR-------LSEAVDC-----------FYQFTL------------TSGLRPDFYTFPPVL 153
           G        L E  DC           + QF L            +  + P  +T   VL
Sbjct: 90  GNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149

Query: 154 KAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD-------- 202
            +C   + L  G+KIH  V+KLG    V VA SLL+MY + G   +A+ +FD        
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIS 209

Query: 203 -----------------------DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
                                   MP RD  SWN+MISGY Q G  +EAL I  +M  E 
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEP 269

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA-------- 290
            +  D  T+ASIL  CA  + +  G  IH YI++   E +  V N LI+MYA        
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329

Query: 291 -------------------------KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                                    K G ++ A  +F+++ +RDVV+W ++I  Y Q+  
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  M   G +P+  TL ++ S+ + L    + + +H   ++ G      +  N
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT-N 448

Query: 386 AVVDMYAKLGIINSACAVFEGLP--VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           A++ MYAK G IN A  VF+ LP   K+++SW ++I   AQ+GL  EAI +F+ M     
Sbjct: 449 ALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG- 506

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDA 502
           + P+  TYV +L A +HVG + QG K +  + + + +   +    C++D+YG+ G + +A
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML--DEGVRPDHITFVSLLTAC 559
                 +P    ++ W ++++   IH   D A     ++L  D G    ++   ++ +AC
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 192/429 (44%), Gaps = 48/429 (11%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K + +   L++ Y   G    +   F+ +  R++ +WNSMIS Y + G   EA+  F +
Sbjct: 205 VKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSK 264

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                 L+PD +T   +L AC NL     GK+IH  +L+   E    V  +L+ MY + G
Sbjct: 265 MLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSG 324

Query: 193 -------------------------------LANV--ARKLFDDMPVRDSGSWNAMISGY 219
                                          L NV  AR++F+ +  RD  +W AMI GY
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q+G   +AL++   M  EG   +  T+A++L V +    +  G  IH   +K G     
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444

Query: 280 FVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            V+N LI MYAK G +  A RVFD    ++++VSW S+I A  Q      A   F  M  
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G++PD +T V + S    +      R  +  +         +     ++D+Y + G++ 
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564

Query: 399 SACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVS 453
            A    E +P++ D I+W +L+     +    LA  A E   +      I+P N G Y++
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLL------IDPGNSGAYLA 618

Query: 454 ILPAYSHVG 462
           +   YS  G
Sbjct: 619 LANVYSACG 627



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 198/478 (41%), Gaps = 95/478 (19%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A IL    R  +  +G  +H  I+K GL   +++ NNL+  YAK G +R A  VFD+M  
Sbjct: 14  AHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPL 73

Query: 308 RDVVSWNSIIAAY-EQSN--------------DPIT----------------AHGFFTTM 336
           +   SWN++I+ Y +Q N              DP++                A   F  M
Sbjct: 74  KSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKM 133

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG--------------------- 375
               + P   T+ ++ S  A        R +H F+++ G                     
Sbjct: 134 ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDP 193

Query: 376 ---------WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
                      ++++   NA++ +Y + G    A + FE +P +D++SWN++I+GY+Q G
Sbjct: 194 VIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQG 253

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK---------- 476
              EA+ +F  M     + P+  T  SIL A +++  L  G +IHA +++          
Sbjct: 254 YNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVG 313

Query: 477 NCLC-----------------------FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           N L                         ++   T L+D Y K G +  A  +F ++    
Sbjct: 314 NALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V W A+I  +  +G  + AL  FR M++EG  P+  T  ++L+  S   ++  G++  H
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ-IH 432

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               + G          ++ ++ + G++ +A         + +   W +++ A   HG
Sbjct: 433 ASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHG 490



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 107/213 (50%), Gaps = 11/213 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWN 114
           S T L H K++HA  + +G+  T   +  L+  YA  G+++ ++  FD  +  + + +W 
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKL 172
           SMI    + G   EA++ F +  L+ G++PD  T+  VL AC +  LV+  + + +++  
Sbjct: 481 SMIMALAQHGLGKEAINLFERM-LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTE 539

Query: 173 GFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEAL 229
             E +  ++  A ++ +Y R GL   A    + MP+  D+ +W ++++  C+     +  
Sbjct: 540 VHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLAS-CKIHKNADLA 598

Query: 230 DILDEMRL---EGVSMDPITVASILPVCARSDN 259
            +  E  L    G S   + +A++   C + +N
Sbjct: 599 KVAAERLLLIDPGNSGAYLALANVYSACGKWEN 631


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 289/760 (38%), Positives = 411/760 (54%), Gaps = 68/760 (8%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           TK ++ +   G    +   FD +  RN  ++N+MIS Y+R  + S A D F         
Sbjct: 37  TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLF--------- 87

Query: 143 RPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
                               K  H  +    F W++ +       Y R      AR LFD
Sbjct: 88  -------------------DKMPHKDL----FSWNLMLTG-----YARNRRLRDARMLFD 119

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            MP +D  SWNAM+SGY +SG+  EA D+ D M  +    + I+   +L    RS  +  
Sbjct: 120 SMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEE 175

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
                  + +   ++ L   N L+  Y K  M+  A ++FDQ+  RD++SWN++I+ Y Q
Sbjct: 176 AR----RLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQ 231

Query: 323 SNDPITAHGFF-----------TTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGF 370
             D   A   F           T M  A +Q  +L     +   + Q  +   +  + G+
Sbjct: 232 DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGY 291

Query: 371 I------MRRGWFME----DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
                  M R  F E    ++   N ++  Y + G +  A  +F+ +P +D +SW  +I 
Sbjct: 292 AQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIA 351

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GYAQNGL  EA+ +   M+   E + N+ T+   L A + + AL  G ++H +V++    
Sbjct: 352 GYAQNGLYEEAMNMLVEMKRDGE-SLNRSTFCCALSACADIAALELGKQVHGQVVRTGYE 410

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
               V   LV MY KCG ID+A  +F  V     V WN +++ +  HG G +AL  F  M
Sbjct: 411 KGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESM 470

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +  GV+PD IT V +L+ACSH+GL   G  YFH M +++GI P+ KHY CM+DL GRAG 
Sbjct: 471 ITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGC 530

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A N I+NMP  PDA+ WGALLGA RIHGNMELG  A++ +F+++  N G YVL+SN+
Sbjct: 531 LEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNL 590

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA  G+W  V ++R   R  G++KTPG+S +EV NK+  F  G+  HP+  +IY  L  L
Sbjct: 591 YAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEEL 650

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             KMK  GYV     VL DVEE+EK+H+L  HSE+LA+AFGI++ P   PI++ KNLRVC
Sbjct: 651 DLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVC 710

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            DCHN  K IS+I  R IIVRDS+R+HHF +GICSC DYW
Sbjct: 711 EDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 234/496 (47%), Gaps = 44/496 (8%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K +FS   ++  YA    L  +R  FD +  ++V +WN+M+S YVR G + EA D F + 
Sbjct: 93  KDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152

Query: 137 TLTSGLRPD----FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
              + +  +     Y     L+  R L + K           +W++     L+  Y +  
Sbjct: 153 PHKNSISWNGLLAAYVRSGRLEEARRLFESKS----------DWELISCNCLMGGYVKRN 202

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV----SMDPITVA 248
           +   AR+LFD +PVRD  SWN MISGY Q G+  +A  + +E  +  V    +M    V 
Sbjct: 203 MLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQ 262

Query: 249 SILPVCAR------------SDNILSGLLIHLYIVKHGLEF-------NLFVSNNLINMY 289
             +   AR            S N++         +  G E        N+   N +I+ Y
Sbjct: 263 DGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGY 322

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            + G +  A  +FD M +RD VSW +IIA Y Q+     A      M++ G   +  T  
Sbjct: 323 CQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
              S  A +      + VHG ++R G + +  ++GNA+V MY K G I+ A  VF+G+  
Sbjct: 383 CALSACADIAALELGKQVHGQVVRTG-YEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQH 441

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD++SWNT++ GYA++G   +A+ VF+ M     + P++ T V +L A SH G   +G +
Sbjct: 442 KDIVSWNTMLAGYARHGFGRQALTVFESMITAG-VKPDEITMVGVLSACSHTGLTDRGTE 500

Query: 470 -IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
             H+      +  +     C++D+ G+ G +++A +L   +P    +  W A++    IH
Sbjct: 501 YFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIH 560

Query: 528 GQ---GDKALNFFRQM 540
           G    G++A     +M
Sbjct: 561 GNMELGEQAAEMVFKM 576



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 187/410 (45%), Gaps = 53/410 (12%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++ + S   +++ YA  GDLS +R  F+    R+V+TW +M+  YV+ G L EA      
Sbjct: 216 VRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEA------ 269

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE------------WDVFVAAS 183
                  R  F   P   +   N++         + +G E            W++ ++  
Sbjct: 270 -------RRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG- 321

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
               YC+ G    AR LFD MP RDS SW A+I+GY Q+G   EA+++L EM+ +G S++
Sbjct: 322 ----YCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLN 377

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T    L  CA    +  G  +H  +V+ G E    V N L+ MY K G +  A  VF 
Sbjct: 378 RSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQ 437

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ--LNDC 361
            +  +D+VSWN+++A Y +      A   F +M  AG++PD +T+V + S  +   L D 
Sbjct: 438 GVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTD- 496

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNA-----VVDMYAKLGIINSACAVFEGLPVK-DVISW 415
           R +   H      G      I  N+     ++D+  + G +  A  +   +P + D  +W
Sbjct: 497 RGTEYFHSMNKDYG------ITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATW 550

Query: 416 NTLITGYAQNG---LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
             L+     +G   L  +A E+   ME       N G YV +   Y+  G
Sbjct: 551 GALLGASRIHGNMELGEQAAEMVFKMEP-----HNSGMYVLLSNLYAASG 595



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 6/166 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H  +V +G  K       LV  Y   G +  +   F  + ++++ +WN+M++ Y R 
Sbjct: 398 KQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARH 457

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD--GKKIHCSVLKLGFEWDVF 179
           G   +A+  F +  +T+G++PD  T   VL AC +  L D   +  H      G   +  
Sbjct: 458 GFGRQALTVF-ESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSK 516

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGN 224
             A ++ +  R G    A+ L  +MP   D+ +W A++      GN
Sbjct: 517 HYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGN 562


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 286/758 (37%), Positives = 423/758 (55%), Gaps = 19/758 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + +F +T L++ Y   G +  +   F  I   ++  WN+ I          +      + 
Sbjct: 168 RDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRR 227

Query: 137 TLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               GL P+  +F  +L +C    +L   + IH  V +LGF  DV VA +L+ MY R G 
Sbjct: 228 MWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGS 287

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT-VASILP 252
            + +  +F+ M VR+  SWNAMI+ + Q G+   A  I   M+ EG   + IT V ++  
Sbjct: 288 VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKA 347

Query: 253 VCARSDNIL-SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            C+ S   L     +H +I   GLE ++ V   L+ MY   G +  A   FD +  +++V
Sbjct: 348 ACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 407

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN+++ AY  +     A   F  M++  + P+    VS  +++    D   +RS+H  +
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK---VSYLAVLGCCEDVSEARSIHAEV 464

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           +  G F ++  I N VV M+A+ G +  A A F+   VKD +SWNT +   +       A
Sbjct: 465 VGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGA 524

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLV 490
           I  F  M+      P++ T VS++   + +G L  G  I  ++     +  DV VA+ ++
Sbjct: 525 ITAFYTMQH-EGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVM 583

Query: 491 DMYGKCGR-IDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VR 546
           +M  KCG  +D+   LF ++P  R   V WN +I+ +  HG G KAL  FR M     VR
Sbjct: 584 NMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVR 643

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH-LKHYGCMVDLFGRAGHLGMAH 605
           PD  TFVS+L+ CSH+GLV +G   F + +E  GI+   ++HY C+VD+ GR G+L  A 
Sbjct: 644 PDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAE 703

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV-DSENVGYYVLMSNIYANV 664
           +FI+ MP+  D+ +W +LLGAC  +G++E G  A+    E+  S++VGY VL SNIYA  
Sbjct: 704 DFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVL-SNIYAAA 762

Query: 665 GKWEGVDEVRS-LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
           G+WE    VR  +A  R  K+ PG SSI V N+V  F+  +R+HP+ + IY EL  L   
Sbjct: 763 GRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGL 822

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           ++  GYVPD   VL DVEE++KE +L  HSE+LAIAFG+IS P +  I++ KNLRVC DC
Sbjct: 823 IREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDC 882

Query: 784 HNWTKFISQITEREIIVRDSNRFHHF-KDGICSCGDYW 820
           H  TKFI+++T+REI VRD NRFHHF KDG CSCGDYW
Sbjct: 883 HTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/546 (28%), Positives = 273/546 (50%), Gaps = 26/546 (4%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  SC   + L   + +HA +   G +  V  +T LV  Y   G +  S   F+ ++
Sbjct: 240 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 299

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC-----RNLVD 161
            RN  +WN+MI+ + +CG  S A   +++     G RP+  TF   LKA      ++L +
Sbjct: 300 VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ-QEGFRPNKITFVTALKAACSSSSQDLGE 358

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
              +H  +   G E DV V  +L+ MY   G  + AR  FD +P ++  SWNAM++ Y  
Sbjct: 359 SAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGD 418

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL-EFNLF 280
           +G A EA+++   M+ + ++ + ++  ++L  C   +++     IH  +V +GL      
Sbjct: 419 NGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESS 475

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           ++N ++ M+A+ G +  A+  FD  + +D VSWN+ +AA     D   A   F TMQ  G
Sbjct: 476 IANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEG 535

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            +PD  TLVS+  + A L      RS+   +        DV++ +AV++M AK G     
Sbjct: 536 FRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDE 595

Query: 401 CA-VFEGLP--VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           C  +F  +P   KD+++WNT+I  YAQ+G   +A+++F++M++ + + P+  T+VS+L  
Sbjct: 596 CERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSG 655

Query: 458 YSHVGALRQGIKIH--ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            SH G +  GI     AR +       V    CLVD+ G+ G + +A     ++P  + S
Sbjct: 656 CSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADS 715

Query: 515 VPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
           V W +++     +G    G++A   F ++     R D + +V L    + +G   +  R 
Sbjct: 716 VVWTSLLGACSSYGDLEGGERAARAFIELY----RSDSVGYVVLSNIYAAAGRWEDSIRV 771

Query: 572 FHMMQE 577
              M E
Sbjct: 772 REDMAE 777



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 269/595 (45%), Gaps = 31/595 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   ++LH  +V  G  +       LV  Y+    L  +   F  +  R + TWN++I+ 
Sbjct: 40  LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA 99

Query: 120 YVRCGRLSEAVDCFYQFTLTSGL--RPDFYTFPPVLKA-------------CRNLVDGKK 164
                  +   D + +  L      RP+  T   VL A               ++   + 
Sbjct: 100 Q---SSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARI 156

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H  +     E D+FVA +LL  Y + G    A ++F  + V D   WNA I   C   +
Sbjct: 157 VHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMA-CAGND 215

Query: 225 AV--EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
                AL ++  M LEG+  +  +  +IL  C    ++     IH  + + G   ++ V+
Sbjct: 216 ERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVA 275

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             L+ MY + G +  ++ VF+ M  R+ VSWN++IAA+ Q      A   +  MQQ G +
Sbjct: 276 TALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFR 335

Query: 343 PDLLTLVSL--TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           P+ +T V+    +  +   D   S ++HG+I   G    DV++G A+V MY   G I+ A
Sbjct: 336 PNKITFVTALKAACSSSSQDLGESAALHGWIACAG-LEGDVMVGTALVTMYGSTGAIDRA 394

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
            A F+ +P K+++SWN ++T Y  NG A EA+E+F  M+    + PN+ +Y+++L     
Sbjct: 395 RAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR-QSLAPNKVSYLAVLGCCED 453

Query: 461 VGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
           V   R    IHA V+ N L   +  +A  +V M+ + G +++A++ F       SV WN 
Sbjct: 454 VSEAR---SIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNT 510

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
            ++          A+  F  M  EG RPD  T VS++  C+  G +  G+     +    
Sbjct: 511 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 570

Query: 580 GIKPHLKHYGCMVDLFGRAG-HLGMAHNFIQNMP-VRPDASIWGALLGACRIHGN 632
            ++  +     ++++  + G  +         MP  R D   W  ++ A   HG+
Sbjct: 571 EVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGH 625



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 215/431 (49%), Gaps = 24/431 (5%)

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T   +L+ C    +L  G+++H  ++K G   +  +   L+ MY +    + A   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM---DPITVASILPVCA------ 255
             R   +WN +I+   QS  A    D+   M+LE  +    + +T+ ++L   A      
Sbjct: 86  RSRGIATWNTLIAA--QSSPAA-VFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 256 ----RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
               R+ +I    ++H  I    LE +LFV+  L++ Y K G +  AL VF ++   D++
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 202

Query: 312 SWNSIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
            WN+ I A   +++ P  A      M   G+ P+  + V++ S     +    +RS+H  
Sbjct: 203 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 262

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           +   G F+ DV++  A+V MY + G ++ + AVFE + V++ +SWN +I  +AQ G  S 
Sbjct: 263 VEELG-FLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSA 321

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAY--SHVGALRQGIKIHARVIKNCLCFDVFVATC 488
           A  ++  M++     PN+ T+V+ L A   S    L +   +H  +    L  DV V T 
Sbjct: 322 AFAIYWRMQQ-EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTA 380

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LV MYG  G ID A + F  +P  + V WNA+++ +G +G+  +A+  F  M  + + P+
Sbjct: 381 LVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPN 440

Query: 549 HITFVSLLTAC 559
            ++++++L  C
Sbjct: 441 KVSYLAVLGCC 451



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 207/453 (45%), Gaps = 35/453 (7%)

Query: 244 PI-TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           PI T+A +L  C    ++  G  +H  IVK GL  N  + N L+ MY+K   +  A   F
Sbjct: 23  PIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAF 82

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM---QQAGIQPDLLTLVSLTSIVA--- 356
             +  R + +WN++IAA    + P      +T M   ++A  +P+ LT++++   +A   
Sbjct: 83  SALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGD 139

Query: 357 -------QLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLP 408
                  +      +R VH  I  RG  +E D+ +  A++D Y K G + SA  VF  + 
Sbjct: 140 PSSSSSSRAPSIAQARIVHDDI--RGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQ 197

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           V D+I WN  I   A N    +   +         + PN+ ++V+IL +     +L    
Sbjct: 198 VPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLAR 257

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
            IHARV +     DV VAT LV MYG+CG +D+++++F  +   + V WNA+I+     G
Sbjct: 258 SIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCG 317

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLL-TACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
               A   + +M  EG RP+ ITFV+ L  ACS S          H      G++  +  
Sbjct: 318 HRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMV 377

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA----CRIHGNMELGAVASDRL 643
              +V ++G  G +  A      +P +   S W A+L A     R    MEL   A+ + 
Sbjct: 378 GTALVTMYGSTGAIDRARAAFDAIPAKNIVS-WNAMLTAYGDNGRAREAMEL--FAAMKR 434

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
             +    V Y  ++       G  E V E RS+
Sbjct: 435 QSLAPNKVSYLAVL-------GCCEDVSEARSI 460


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 275/706 (38%), Positives = 402/706 (56%), Gaps = 40/706 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVR 207
           +L  C+ L   + IH  ++K+G     +  + L+  +C     F     A  +F  +   
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKTIQEP 97

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +   WN M  G+  S + V AL +   M   G+  +  T   +L  CA+S     G  IH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--------------- 312
            +++K G + +L+V  +LI+MY + G +  A +VFD+   RDVVS               
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 313 ----------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
                           WN++I+ Y ++ +   A   F  M +  ++PD  T+V++ S  A
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           Q       R VH +I   G F  ++ I NA++D+Y+K G + +AC +FE LP KDVISWN
Sbjct: 278 QSGSIELGRQVHLWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           TLI GY    L  EA+ +FQ M    E  PN  T +SILPA +H+GA+  G  IH  + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 477 NC--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
               +     + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ D + 
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F +M   G++PD ITFV LL+ACSHSG++  G+  F  M +++ + P L+HYGCM+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            G +G    A   I  M + PD  IW +LL AC++HGN+ELG   ++ L +++ EN G Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA+ G+W  V + R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I 
Sbjct: 636 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 695

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC +CH  TK IS+I +REII RD  RFHHF+DG+CSC DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 246/484 (50%), Gaps = 41/484 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRN 109
           L  +C  L  ++ +HA ++  G   T ++ +KL+ F     +   L ++   F  I   N
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +  WN+M   +        A+   Y   ++ GL P+ YTFP VLK+C   +   +G++IH
Sbjct: 99  LLIWNTMFRGHALSSDPVSALK-LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 167 CSVLKLGFEWDVFVAASLLHMYCR-------------------------------FGLAN 195
             VLKLG + D++V  SL+ MY +                                G   
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            A+KLFD++PV+D  SWNAMISGY ++GN  EAL++  +M    V  D  T+ +++  CA
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +S +I  G  +HL+I  HG   NL + N LI++Y+K G +  A  +F+++  +DV+SWN+
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  Y   N    A   F  M ++G  P+ +T++S+    A L      R +H +I +R 
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397

Query: 376 WFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
             + +   +  +++DMYAK G I +A  VF  +  K + SWN +I G+A +G A  + ++
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMY 493
           F  M +   I P+  T+V +L A SH G L  G  I   + ++  +   +    C++D+ 
Sbjct: 458 FSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516

Query: 494 GKCG 497
           G  G
Sbjct: 517 GHSG 520


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 259/666 (38%), Positives = 386/666 (57%), Gaps = 34/666 (5%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           +Y    L + + +LF+ +    + +W ++I  Y   G   ++L     M   G+  D   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR------ 300
             S+L  CA   ++  G  +H YI++ GL+F+L+  N L+NMY+K   +  + R      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 301 -VFDQMMER-------------------------DVVSWNSIIAAYEQSNDPITAHGFFT 334
            VFD+M ER                         D+VSWN+IIA   ++           
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M  A ++PD  TL S+  ++A+  D    + +HG  +R+G    D+ + ++++DMYAK 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQG-LDADIYVASSLIDMYAKC 287

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
             +  +C VF  L  +D ISWN++I G  QNGL  E +  F+ M    +I P   ++ SI
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMA-KIKPKSYSFSSI 346

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           +PA +H+  L  G ++H  + +N    ++F+A+ LVDMY KCG I  A  +F ++     
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W A+I    +HGQ   A+  F QM  EG++P+H+ F+++LTACSH GLV E  +YF+ 
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNS 466

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M  +FGI P ++HY  + DL GRAG L  A++FI  M + P  SIW  LL ACR+H N++
Sbjct: 467 MTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNID 526

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +    ++R+ EVD  N G Y+L++NIY+   +W+   + R+  R  G++KTP  S IEV 
Sbjct: 527 MAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVK 586

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
           NKV  F  G+ +HP YEKI + +  L   M+  GYVPD S V  DVEE++K++++ SHSE
Sbjct: 587 NKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSE 646

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           RLAI FGII++P    I++ KNLRVC DCH  TKFIS+I  REI+VRD++RFHHFK+G C
Sbjct: 647 RLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTC 706

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 707 SCGDYW 712



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 251/498 (50%), Gaps = 52/498 (10%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y+++  L  S   F+ I +     W S+I  Y   G   +++  F    L SGL PD  
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGM-LASGLYPDHN 107

Query: 148 TFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYC-----------RFGL 193
            FP VLK+C  L+D   G+ +H  ++++G ++D++   +L++MY            R G 
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167

Query: 194 ANV---------------------ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
             V                      RK+F+ MP +D  SWN +I+G  ++G   E L ++
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            EM    +  D  T++S+LP+ A + +I  G  IH   ++ GL+ +++V+++LI+MYAK 
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  + RVF  + ERD +SWNSIIA   Q+        FF  M  A I+P   +  S+ 
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A L      + +HG+I R G F E++ I +++VDMYAK G I +A  +F+ + ++D+
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNG-FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +SW  +I G A +G A +AIE+F+ M E   I PN   ++++L A SH G + +  K   
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQM-ETEGIKPNHVAFMAVLTACSHGGLVDEAWKYF- 464

Query: 473 RVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPWNAIISCH 524
               N +  D  +A        + D+ G+ GR+++A        +  + S+ W  ++S  
Sbjct: 465 ----NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSI-WATLLSAC 519

Query: 525 GIHGQGDKALNFFRQMLD 542
            +H   D A     ++L+
Sbjct: 520 RVHXNIDMAEKVANRILE 537



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 190/393 (48%), Gaps = 37/393 (9%)

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
           R  F+ +  +++ +WN++I+   R G   E +    +    + L+PD +T   VL     
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMG-GANLKPDSFTLSSVLPLIAE 251

Query: 159 LVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
            VD   GK+IH   ++ G + D++VA+SL+ MY +      + ++F  +  RD  SWN++
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           I+G  Q+G   E L    +M +  +     + +SI+P CA    +  G  +H YI ++G 
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII---AAYEQSNDPITAHGF 332
           + N+F++++L++MYAK G +R A ++FD+M  RD+VSW ++I   A + Q+ D I     
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIE---L 428

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-----FMEDVIIG--- 384
           F  M+  GI+P+ +      + +A L  C      HG ++   W        D  I    
Sbjct: 429 FEQMETEGIKPNHV------AFMAVLTACS-----HGGLVDEAWKYFNSMTRDFGIAPGV 477

Query: 385 ---NAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEE 440
               AV D+  + G +  A     G+ +    S W TL++    +     A +V   +  
Sbjct: 478 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRIL- 536

Query: 441 CNEINPNQ-GTYVSILPAYSHVGALRQGIKIHA 472
             E++PN  G Y+ +   YS     ++  K  A
Sbjct: 537 --EVDPNNTGAYILLANIYSAARRWKEAAKWRA 567



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 109/195 (55%), Gaps = 4/195 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   +  G    ++ ++ L++ YA    ++ S   F  ++ R+  +WNS+I+  V+ 
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   E +  F Q  L + ++P  Y+F  ++ AC +L     GK++H  + + GF+ ++F+
Sbjct: 319 GLFDEGLRFFRQM-LMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A+SL+ MY + G    A+++FD M +RD  SW AMI G    G A +A+++ ++M  EG+
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437

Query: 241 SMDPITVASILPVCA 255
             + +   ++L  C+
Sbjct: 438 KPNHVAFMAVLTACS 452



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 9/183 (4%)

Query: 44  ESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           + +   F  +  +C   T LH  K+LH  +  +G  + +F ++ LV+ YA  G++  ++ 
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            FD +  R++ +W +MI      G+  +A++ F Q   T G++P+   F  VL AC +  
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQME-TEGIKPNHVAFMAVLTACSHGG 455

Query: 159 LVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAM 215
           LVD   K  +      G    V   A++  +  R G    A      M +  +GS W  +
Sbjct: 456 LVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATL 515

Query: 216 ISG 218
           +S 
Sbjct: 516 LSA 518


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 413/748 (55%), Gaps = 7/748 (0%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S   +++ +   G LS +R  FD +  R   +W  +I  Y++  +  EA    Y  
Sbjct: 72  KNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFR-LYAD 130

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G+ PD+ T   +L     L       +IH  V+KLG+E+++ V  SL+  YC+   
Sbjct: 131 MRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC 190

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
             +A +LF  M  +D+ ++N++++GY   G   EA+++  E+   G+     T A++L  
Sbjct: 191 LYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               D+   G  +H +++K    +N+FV N L++ Y+K   +    ++F +M E D +S+
Sbjct: 251 AVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISY 310

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N +I +Y  +     +   F  +Q            +L SI     + R  R +H   + 
Sbjct: 311 NVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAIT 370

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G   E  +  NA+VDMYAK      A  +F+ +  K  + W  +I+ Y Q G   E I 
Sbjct: 371 VGANFESRV-ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGIN 429

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           VF  M     +  +Q T+ SIL A +++ ++  G ++H+ +I++    +V+  + L+D Y
Sbjct: 430 VFSDMRRTG-VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTY 488

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG + DA+  F ++P  +SV WNA+IS +  +G  D  LN F+QM+  G +PD ++F+
Sbjct: 489 AKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFL 548

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L+ACSH G V E   +F+ M + + + P  +HY  MVD+  R G    A   +  MP 
Sbjct: 549 SVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPF 608

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEV-DSENVGYYVLMSNIYANVGKWEGVDE 672
            P   +W ++L +CRIH N EL   A+DRLF + D  +   Y+ MSNIYA  G+W+ V +
Sbjct: 609 EPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAK 668

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V+   RDRG++K P +S +E+ ++  +F   +++HP+ +KI  ++  L+ +M+  GY PD
Sbjct: 669 VKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPD 728

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            +  L DV+E  K   L  HSER AIAF ++++P  SPI + KNLR C DCH   K ISQ
Sbjct: 729 TTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQ 788

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I EREIIVRDS+RFHHFKDG+CSCGDYW
Sbjct: 789 IVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 240/501 (47%), Gaps = 35/501 (6%)

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD--------SG------ 210
           I   ++K GF  +   +   ++ +   G    A ++FD MP ++        SG      
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 211 -----------------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
                            SW  +I GY QS  + EA  +  +MR  G+  D +T+ ++L  
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               +     + IH +++K G E+NL V N+L++ Y K   +  A ++F  M+ +D V++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           NS++  Y        A   F  +  +GI+P   T  +L S    L+D +  + VHGF+++
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
              F+ +V +GNA++D Y+K   ++    +F  +P  D IS+N +IT YA NG   E+ +
Sbjct: 270 TN-FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFD 328

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F+ + +    +  Q  + ++L   +    LR G +IH + I     F+  V   LVDMY
Sbjct: 329 LFRKL-QFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMY 387

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KC    +A  +F  +   S+VPW A+IS +   G+ ++ +N F  M   GV  D  TF 
Sbjct: 388 AKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFA 447

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L AC++   +S G R  H +    G   ++     ++D + + G +  A      MP 
Sbjct: 448 SILRACANLASISLG-RQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPE 506

Query: 614 RPDASIWGALLGACRIHGNME 634
           R   S W AL+ A   +GN++
Sbjct: 507 RNSVS-WNALISAYAQNGNVD 526



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 239/491 (48%), Gaps = 17/491 (3%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           + ++H  ++  G    +     LV+ Y     L  +   F H+  ++  T+NS+++ Y  
Sbjct: 159 IVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSN 218

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
            G   EA++ F +    SG++P  +TF  +L A   L D   G+++H  VLK  F W+VF
Sbjct: 219 EGLNEEAIELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +LL  Y +    +   KLF +MP  D  S+N +I+ Y  +G   E+ D+  +++   
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTR 337

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
                   A++L +   S N+  G  IH   +  G  F   V N L++MYAK    + A 
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           ++FD +  +  V W ++I+AY Q          F+ M++ G+  D  T  S+    A L 
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                R +H  ++R G FM +V  G+A++D YAK G +  A   F  +P ++ +SWN LI
Sbjct: 458 SISLGRQLHSLLIRSG-FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALI 516

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + YAQNG     +  FQ M +     P+  +++S+L A SH G + + +     + +   
Sbjct: 517 SAYAQNGNVDGTLNSFQQMIQSG-YKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQ--- 572

Query: 480 CFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII-SC--HGIHGQGD 531
            ++V       T +VD+  + GR D+A  L  ++P   S + W++++ SC  H  H    
Sbjct: 573 IYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAK 632

Query: 532 KALNFFRQMLD 542
           KA +    M D
Sbjct: 633 KAADRLFNMED 643



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 35/406 (8%)

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ----------------- 304
           S  LI  +IVK G   N   SN  +N + + G + HA +VFDQ                 
Sbjct: 26  SNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHL 85

Query: 305 --------------MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
                         M+ER  VSW  +I  Y QSN    A   +  M++ GI+PD +TLV+
Sbjct: 86  KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           L S   +L        +H  +++ G +  ++++ N++VD Y K   +  A  +F+ +  K
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLG-YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK 204

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D +++N+L+TGY+  GL  EAIE+F  +     I P+  T+ ++L A   +   + G ++
Sbjct: 205 DTVTFNSLMTGYSNEGLNEEAIELFLELHNSG-IKPSDFTFAALLSAAVGLDDTKFGQQV 263

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H  V+K    ++VFV   L+D Y K  ++D+   LFY++P    + +N +I+ +  +GQ 
Sbjct: 264 HGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQF 323

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            ++ + FR++           F +LL+  + S  +  G R  H      G     +    
Sbjct: 324 KESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMG-RQIHCQAITVGANFESRVENA 382

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +VD++ +      A     N+  +     W A++ A    G  E G
Sbjct: 383 LVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISAYVQKGKHEEG 427



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 54/319 (16%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  + ++C  L  +   ++LH+LL+ SG +  V+S + L++ YA  G ++ +  +F 
Sbjct: 443 QATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFG 502

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            +  RN  +WN++IS Y + G +   ++ F Q  + SG +PD  +F  VL AC       
Sbjct: 503 EMPERNSVSWNALISAYAQNGNVDGTLNSFQQM-IQSGYKPDSVSFLSVLSACS------ 555

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
             HC           FV  +L H        N   ++++  P R+   + +M+   C++G
Sbjct: 556 --HCG----------FVEEALWHF-------NSMTQIYEVTPKRE--HYTSMVDVLCRNG 594

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCA--RSDNILSGLLIHLYIVKHGLEFNLFV 281
              EA  ++ EM  E      I  +S+L  C   ++  +       L+ ++   +   ++
Sbjct: 595 RFDEAEKLMTEMPFEP---SEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDV-----VSW------NSIIAAYEQSNDPITA- 329
             N+ N+YA  G   +  +V   M +R V      SW        + +A ++S+  +   
Sbjct: 652 --NMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKI 709

Query: 330 ----HGFFTTMQQAGIQPD 344
               +     M++ G +PD
Sbjct: 710 LRKINALSKEMEKKGYKPD 728


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/706 (38%), Positives = 398/706 (56%), Gaps = 40/706 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVR 207
           +L  C+ L   + IH  ++K G     +  + L+  +C     F     A  +F+ +   
Sbjct: 8   LLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEP 66

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +   WN M  G+  S + V AL +   M   G+  +  T   +L  CA+S     G  IH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIH 126

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--------------- 312
            +++K G + +L+V  +LI+MY + G +  A +VFDQ   RDVVS               
Sbjct: 127 GHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIA 186

Query: 313 ----------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
                           WN++I+ Y ++ +   A   F  M +  ++PD  T+VS+ S  A
Sbjct: 187 SAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 246

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           Q       R VH +I   G F  ++ I NA++D+Y K G + +AC +FEGL  KDVISWN
Sbjct: 247 QSASIELGRQVHSWIDDHG-FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           TLI GY    L  EA+ +FQ M    E +PN  T +SILPA +H+GA+  G  IH  + K
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364

Query: 477 NCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
                    +  T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A 
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F +M    + PD ITFV LL+ACSHSG++  G+  F  M+E++ I P L+HYGCM+DL
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDL 484

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            G +G    A   I  M + PD  IW +LL AC+++ N+ELG   +  L +++ +N G Y
Sbjct: 485 LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSY 544

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA  G+W  V ++R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY
Sbjct: 545 VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I 
Sbjct: 605 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 664

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC +CH  TK IS+I +REII RD  RFHHF+DG+CSC DYW
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 188/405 (46%), Gaps = 15/405 (3%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G ++ ++  FD I  ++V +WN+MIS Y   G   EA++ F + 
Sbjct: 167 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 226

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   V+ AC        G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 227 -MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +  +D  SWN +I GY       EAL +  EM   G S + +T+ SILP 
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 345

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+        +LI+MYAK G +  A +VFD ++ R + 
Sbjct: 346 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 405

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        A   F+ M++  I+PD +T V L S  +        R +   +
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGL 427
                    +     ++D+    G+   A  +   + ++ D + W +L+     YA   L
Sbjct: 466 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVEL 525

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
                +    +E       N G+YV +   Y+  G   +  KI A
Sbjct: 526 GESYAQNLIKIEP-----KNPGSYVLLSNIYATAGRWNEVAKIRA 565


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/644 (39%), Positives = 381/644 (59%), Gaps = 28/644 (4%)

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P R + SW   +    +S +  EA+    EM + G   D     ++L   +   ++ +G 
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 265 LIHLYIVKHG---------------------LEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            IH   VK G                     +    F +N L+ MYAK G +  +  +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
             ++RD+VSWN++I+++ QS+    A  FF  M   G++ D +T+ S+    + L     
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + +H +++R    +E+  +G+A+VDMY     + S   VF+ +  + +  WN +I+GYA
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH-VGALRQGIKIHARVIKNCLCFD 482
           +NGL  +A+ +F  M +   + PN  T  S++PA  H + A+ +G +IHA  I+N L  D
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           + V + LVDMY KCG ++ +  +F ++P  + + WN +I   G+HG+G++AL  F+ M+ 
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 543 EGVR-----PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           E  R     P+ +TF+++  ACSHSGL+SEG   F+ M+ + G++P   HY C+VDL GR
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 472

Query: 598 AGHLGMAHNFIQNMPVRPD-ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           AG L  A+  +  MP   D    W +LLGACRIH N+ELG VA+  L  ++     +YVL
Sbjct: 473 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVL 532

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIY++ G W    EVR   R  G+KK PG S IE  ++V  F  G+ +HP+ E+++  
Sbjct: 533 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGF 592

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  L+ KM+  GYVPD S VL +V+EDEKE++L  HSE+LAIAFGI+++PP + I++ KN
Sbjct: 593 LETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKN 652

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVC DCH  TKFIS+I EREIIVRD  RFHHFK+G CSCGDYW
Sbjct: 653 LRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 230/456 (50%), Gaps = 40/456 (8%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKK 164
           R+  +W   +    R     EA+  + + T+ SG RPD + FP VLKA   L D   G++
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTV-SGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 165 IHCSVLKLGFEWD---------------------VFVAASLLHMYCRFGLANVARKLFDD 203
           IH + +K G+                         F   +L+ MY + G  + ++ LF+ 
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFES 173

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
              RD  SWN MIS + QS    EAL     M LEGV +D +T+AS+LP C+  + +  G
Sbjct: 174 FVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 264 LLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
             IH Y++++  L  N FV + L++MY     +    RVFD ++ R +  WN++I+ Y +
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 293

Query: 323 SN-DPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
           +  D      F   ++ AG+ P+  T+ S + + V  L      + +H + + R     D
Sbjct: 294 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAI-RNMLASD 352

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ-MME 439
           + +G+A+VDMYAK G +N +  VF  +P K+VI+WN LI     +G   EA+E+F+ M+ 
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 440 EC---NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC---LCFDVFVATCLVDMY 493
           E     E  PN+ T++++  A SH G + +G+ +  R+  +       D +   C+VD+ 
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA--CVVDLL 470

Query: 494 GKCGRIDDAMSLFYQVPRS--SSVPWNAIISCHGIH 527
           G+ G++++A  L   +P        W++++    IH
Sbjct: 471 GRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 181/361 (50%), Gaps = 28/361 (7%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
            F++  L+  YA LG +  S+  F+    R++ +WN+MIS + +  R SEA+  F++  +
Sbjct: 148 TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL-AFFRLMV 206

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLA 194
             G+  D  T   VL AC +L     GK+IH  VL+      + FV ++L+ MYC     
Sbjct: 207 LEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQV 266

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPV 253
              R++FD +  R    WNAMISGY ++G   +AL +  EM ++ G+  +  T+AS++P 
Sbjct: 267 ESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 326

Query: 254 CARS-DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           C  S   I  G  IH Y +++ L  ++ V + L++MYAK G +  + RVF++M  ++V++
Sbjct: 327 CVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT 386

Query: 313 WNSIIAAYEQSNDPITAHGFFTTM-QQAG----IQPDLLTLVSLTS-------IVAQLND 360
           WN +I A         A   F  M  +AG     +P+ +T +++ +       I   LN 
Sbjct: 387 WNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL 446

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTL 418
               +  HG       +         VVD+  + G +  A  +   +P +   V +W++L
Sbjct: 447 FYRMKHDHGVEPTSDHYA-------CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSL 499

Query: 419 I 419
           +
Sbjct: 500 L 500



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 16/288 (5%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGK-IKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +    +  +C+ L  +   K +HA ++ +   I+  F  + LV+ Y N   +   R  FD
Sbjct: 215 VTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD 274

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----L 159
           HI  R +  WN+MIS Y R G   +A+  F +    +GL P+  T   V+ AC +    +
Sbjct: 275 HILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAI 334

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             GK+IH   ++     D+ V ++L+ MY + G  N++R++F++MP ++  +WN +I   
Sbjct: 335 AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC 394

Query: 220 CQSGNAVEALDILDEMRLE---GVSMDP--ITVASILPVCARSDNILSGL-LIHLYIVKH 273
              G   EAL++   M  E   G    P  +T  ++   C+ S  I  GL L +     H
Sbjct: 395 GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 454

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVV-SWNSIIAA 319
           G+E        ++++  + G +  A  + + M  E D V +W+S++ A
Sbjct: 455 GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 502


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/802 (33%), Positives = 435/802 (54%), Gaps = 64/802 (7%)

Query: 81   SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY-VRCGRLSEAVDCFYQFTLT 139
            ++  L++ Y   GD   +   F     RN   WNS +  +    G L   ++ F +    
Sbjct: 609  AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELH-G 667

Query: 140  SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
             G+  D   +   LK C  ++D   G +IH  ++K GF+ DV++  +L++ Y R      
Sbjct: 668  KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 727

Query: 197  ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
            A ++F +MP  ++  WN  I    QS    + +++  +M+   +  +  T+  +L  C +
Sbjct: 728  ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787

Query: 257  SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
               + +   IH Y+ + GL+ ++ + N LI+MY+K G +  A RVFD M  R+  SWNS+
Sbjct: 788  MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 847

Query: 317  IAAY----------------EQSN---DPIT---------AHGF-------FTTMQQAGI 341
            I++Y                E S+   D +T          HG+          MQ  G 
Sbjct: 848  ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF 907

Query: 342  QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
            +P+  ++ S+   +++L      +  HG+++R G F  DV +G +++DMY K   + SA 
Sbjct: 908  KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNG-FDCDVYVGTSLIDMYVKNHSLXSAQ 966

Query: 402  AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE--------------------- 440
            AVF+ +  +++ +WN+L++GY+  G+  +A+ +   ME+                     
Sbjct: 967  AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026

Query: 441  C--NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
            C      PN  +   +L A + +  L++G +IH   I+N    DVFVAT L+DMY K   
Sbjct: 1027 CARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSS 1086

Query: 499  IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
            + +A  +F ++   +   WN +I    I G G +A++ F +M   GV PD ITF +LL+A
Sbjct: 1087 LKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSA 1146

Query: 559  CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
            C +SGL+ EG +YF  M  ++ I P L+HY CMVDL GRAG+L  A + I  MP++PDA+
Sbjct: 1147 CKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDAT 1206

Query: 619  IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
            IWGALLG+CRIH N+     A+  LF+++  N   Y+LM N+Y+   +WE +D +R L  
Sbjct: 1207 IWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMG 1266

Query: 679  DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
              G++    WS I++N +V +F +  + HP   KIY EL  L ++MK LGYVPD + V Q
Sbjct: 1267 AAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQ 1326

Query: 739  DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
            +++E EK+ IL SH+E+LAI +G+I      PI++ KN R+C DCH+  K+IS +  RE+
Sbjct: 1327 NMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKAREL 1386

Query: 799  IVRDSNRFHHFKDGICSCGDYW 820
             +RD  RFHHF++G CSC D+W
Sbjct: 1387 FLRDGVRFHHFREGKCSCNDFW 1408



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 257/574 (44%), Gaps = 76/574 (13%)

Query: 27   FSAAANSLQISPDCL-ENESREIDFDD-----LFQSCTKLHHV---KRLHALLVVSGKIK 77
            F ++A SL I  +   E   + + FD        ++CT++  +     +H  L+  G   
Sbjct: 648  FKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDL 707

Query: 78   TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
             V+    L+NFY     L  +   F  +       WN  I + ++  +L + V+ F +  
Sbjct: 708  DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ 767

Query: 138  LTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
              S L+ +  T   VL+AC     L   K+IH  V + G + DV +   L+ MY + G  
Sbjct: 768  F-SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKL 826

Query: 195  NVARKLFDDMPVRDSGSWNAMISGYCQ--------------------------------- 221
             +AR++FD M  R++ SWN+MIS Y                                   
Sbjct: 827  ELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGH 886

Query: 222  --SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
               G   E L+IL  M+ EG   +  ++ S+L   +    +  G   H Y++++G + ++
Sbjct: 887  FLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDV 946

Query: 280  FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            +V  +LI+MY K   +  A  VFD M  R++ +WNS+++ Y        A      M++ 
Sbjct: 947  YVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 1006

Query: 340  GIQPDLLT------------------------LVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
            GI+PDL+T                        +  L    A L+  +  + +H   +R G
Sbjct: 1007 GIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG 1066

Query: 376  WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
             F+EDV +  A++DMY+K   + +A  VF  +  K + SWN +I G+A  GL  EAI VF
Sbjct: 1067 -FIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVF 1125

Query: 436  QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV-ATCLVDMYG 494
              M++   + P+  T+ ++L A  + G + +G K    +I +           C+VD+ G
Sbjct: 1126 NEMQKVG-VGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 1184

Query: 495  KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            + G +D+A  L + +P +  +  W A++    IH
Sbjct: 1185 RAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/695 (39%), Positives = 394/695 (56%), Gaps = 40/695 (5%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVRDSGSWNAMISG 218
           + IH  ++K G     +  + L+  +C     F     A  +F+ +   +   WN M  G
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIE-FCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           +  S + V AL +   M   G+  +  T   +L  CA+S     G  IH +++K G + +
Sbjct: 63  HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS-------------------------- 312
           L+V  +LI+MY + G +  A +VFDQ   RDVVS                          
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182

Query: 313 -----WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
                WN++I+ Y ++ +   A   F  M +  ++PD  T+VS+ S  AQ       R V
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H +I   G F  ++ I NA++D+Y K G + +AC +FEGL  KDVISWNTLI GY    L
Sbjct: 243 HSWIDDHG-FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA- 486
             EA+ +FQ M    E +PN  T +SILPA +H+GA+  G  IH  + K         + 
Sbjct: 302 YKEALLLFQEMLRSGE-SPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH 360

Query: 487 -TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A + F +M    +
Sbjct: 361 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 420

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            PD ITFV LL+ACSHSG++  G+  F  M+E++ I P L+HYGCM+DL G +G    A 
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 480

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
             I  M + PD  IW +LL AC++HGN+ELG   +  L +++ +N G YVL+SNIYA  G
Sbjct: 481 EMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 540

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           +W  V ++R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY  L  +   ++
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 600

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I KNLRVC +CH 
Sbjct: 601 EAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 660

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            TK IS+I +REII RD  RFHHF+DG+CSC DYW
Sbjct: 661 ATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 188/402 (46%), Gaps = 9/402 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G ++ ++  FD I  ++V +WN+MIS Y   G   EA++ F + 
Sbjct: 152 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 211

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   V+ AC        G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 212 -MKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 270

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +  +D  SWN +I GY       EAL +  EM   G S + +T+ SILP 
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 330

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+        +LI+MYAK G +  A +VFD ++ R + 
Sbjct: 331 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 390

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        A   F+ M++  I+PD +T V L S  +        R +   +
Sbjct: 391 SWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 450

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
                    +     ++D+    G+   A  +   + ++ D + W +L+     +G    
Sbjct: 451 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 510

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
                Q + +    NP  G+YV +   Y+  G   +  KI A
Sbjct: 511 GESYAQNLIKIEPKNP--GSYVLLSNIYATAGRWNEVAKIRA 550


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/808 (34%), Positives = 427/808 (52%), Gaps = 79/808 (9%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V +   ++N YA LG LS +   F  +  R+V +WN+++S Y + G+   A+D F     
Sbjct: 92  VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVF----VAASLLHMYCRFGLA 194
           T    P+ +TF  V+K+C  L    ++   +L L  ++D      V  +L+ M  R G  
Sbjct: 152 TGDSLPNAFTFGCVMKSCGAL-GWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAM 210

Query: 195 NVARK-------------------------------LFDDMPVRDSGSWNAMISGYCQSG 223
           + A K                               +F  MP RD  SWN +IS   +SG
Sbjct: 211 DFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSG 270

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EALD++ +M  +GV  D  T  S L  CAR  ++  G  +H+ ++++    + +V++
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            ++ +YAK G  + A RVF  + +R+ VSW  +I  + Q      +   F  M+   +  
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV 390

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D   L +L S      D      +H   ++ G     V++ N+++ MYAK G + +A  +
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSG-HTRAVVVSNSLISMYAKCGNLQNAELI 449

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN------------------ 445
           F  +  +D++SW  +IT Y+Q G  ++A E F  M   N I                   
Sbjct: 450 FNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGL 509

Query: 446 -------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
                        P+  TYV++    + +GA + G +I    +K  L  D  V   ++ M
Sbjct: 510 KMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITM 569

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCGRI +A   F  + R   V WNA+I+ +  HG G +A+  F  +L++G +PD+I++
Sbjct: 570 YSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISY 629

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           V++L+ CSHSGLV EG+ YF MM+ +  I P L+H+ CMVDL GRAGHL  A N I  MP
Sbjct: 630 VAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMP 689

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           ++P A +WGALL AC+ HGN +L  +A+  LF++DS   G Y+L++ +YA+ GK +   +
Sbjct: 690 MKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQ 749

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           VR L RD+G+KK+PG+S +EVNN+V +F   + +HP+   I ++L  L  K+  LGYV  
Sbjct: 750 VRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR- 808

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
                    E  +  I   HSE+LA+AFGI+S P   PI I KNLR+C DCH   K IS 
Sbjct: 809 --------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLIST 858

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +T+RE ++RD  RFHHFK G CSC DYW
Sbjct: 859 VTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 260/506 (51%), Gaps = 42/506 (8%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           K  T+     ++  YA    +  +   F  +  R+V +WN +IS   + GR+ EA+D   
Sbjct: 221 KNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVV 280

Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
                 G+RPD  T+   L AC  L     GK++H  V++     D +VA++++ +Y + 
Sbjct: 281 DMH-GKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKC 339

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    A+++F  +  R+S SW  +I G+ Q G   E++++ ++MR E +++D   +A+++
Sbjct: 340 GCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLI 399

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C  + +I  G  +H   +K G    + VSN+LI+MYAK G +++A  +F+ M ERD+V
Sbjct: 400 SGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIV 459

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTM--------------------QQAGIQ--------- 342
           SW  +I AY Q  +   A  FF  M                    ++ G++         
Sbjct: 460 SWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEK 519

Query: 343 ---PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
              PD +T V+L    A +   +    + G  ++ G  ++  ++ NAV+ MY+K G I+ 
Sbjct: 520 DVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVV-NAVITMYSKCGRISE 578

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A   F+ L  KD++SWN +ITGY+Q+G+  +AIE+F  +       P+  +YV++L   S
Sbjct: 579 ARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILN-KGAKPDYISYVAVLSGCS 637

Query: 460 HVGALRQGIKIHARVIK--NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
           H G + +G K +  ++K  + +   +   +C+VD+ G+ G + +A +L  ++P + ++  
Sbjct: 638 HSGLVEEG-KFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEV 696

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLD 542
           W A++S    HG  D A    + + D
Sbjct: 697 WGALLSACKTHGNNDLAELAAKHLFD 722



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 194/434 (44%), Gaps = 64/434 (14%)

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           E N+   N ++N YAK G +  A+ +F +M  RDV SWN+I++ Y QS   + A   F +
Sbjct: 89  EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148

Query: 336 MQQAGIQ-PDLLT-------------------LVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           M+Q G   P+  T                   L+ L S     +D     ++   ++R G
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208

Query: 376 WF-----------MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
                           +I  N+++  YAK   ++ A  +F+ +P +DV+SWN +I+  ++
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           +G   EA+++   M     + P+  TY S L A + + +L  G ++H +VI+N    D +
Sbjct: 269 SGRVREALDMVVDMHG-KGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           VA+ +V++Y KCG   +A  +F  +   +SV W  +I     +G   +++  F QM  E 
Sbjct: 328 VASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387

Query: 545 VRPDHITFVSLLTACSHS--------------------------GLVSEGQRYFHMMQEE 578
           +  D     +L++ C ++                           L+S   +  ++   E
Sbjct: 388 MAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAE 447

Query: 579 ----FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
               F  +  +  +  M+  + + G++  A  F  +M  R +   W A+LGA   HG  E
Sbjct: 448 LIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR-NVITWNAMLGAYIQHGAEE 506

Query: 635 LG-AVASDRLFEVD 647
            G  + SD L E D
Sbjct: 507 DGLKMYSDMLTEKD 520



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 44/302 (14%)

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L+D RN       ++R      +VI  N +++ YAKLG ++ A  +F  +P +DV SWNT
Sbjct: 76  LSDARN-------LLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNT 128

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +++GY Q+G    A+++F  M +  +  PN  T+  ++ +   +G     +++   + K 
Sbjct: 129 IMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKF 188

Query: 478 CLCFDVFVATCLVDMYGKCGR-------------------------------IDDAMSLF 506
               D  V T LVDM  +CG                                +D A+ +F
Sbjct: 189 DSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIF 248

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +P    V WN +IS     G+  +AL+    M  +GVRPD  T+ S LTAC+    + 
Sbjct: 249 KSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLE 308

Query: 567 EGQRYFHMMQEEFGIKPHLKHY--GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            G++    +       PH+  Y    MV+L+ + G    A     ++  R   S W  L+
Sbjct: 309 WGKQLHVQVIRNL---PHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVS-WTVLI 364

Query: 625 GA 626
           G 
Sbjct: 365 GG 366



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 36/291 (12%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH+L + SG  + V  S  L++ YA  G+L  +   F+ ++ R++ +W  MI+ Y + G
Sbjct: 413 QLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVG 472

Query: 125 RLSEAVDCFYQFTLTS-------------------GLR------------PDFYTFPPVL 153
            +++A + F   +  +                   GL+            PD+ T+  + 
Sbjct: 473 NIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLF 532

Query: 154 KACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
           + C ++     G +I    +K+G   D  V  +++ MY + G  + ARK FD +  +D  
Sbjct: 533 RGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLV 592

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLY 269
           SWNAMI+GY Q G   +A++I D++  +G   D I+  ++L  C+ S  +  G     + 
Sbjct: 593 SWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMM 652

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              H +   L   + ++++  + G +  A  + D+M M+     W ++++A
Sbjct: 653 KRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSA 703


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/758 (37%), Positives = 423/758 (55%), Gaps = 19/758 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + +F +T L++ Y   G +  +   F  I   ++  WN+ I          +      + 
Sbjct: 164 RDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRR 223

Query: 137 TLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               GL P+  +F  +L +C    +L   + IH  V +LGF  DV VA +L+ MY R G 
Sbjct: 224 MWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGS 283

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT-VASILP 252
            + +  +F+ M VR+  SWNAMI+ + Q G+   A  I   M+ EG   + IT V ++  
Sbjct: 284 VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKA 343

Query: 253 VCARSDNIL-SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
            C+ S   L     +H +I   GLE ++ V   L+ MY   G +  A   FD +  +++V
Sbjct: 344 ACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 403

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN+++ AY  +     A   F  M++  + P+    VS  +++    D   +RS+H  +
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK---VSYLAVLGCCEDVSEARSIHAEV 460

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           +  G F ++  I N VV M+A+ G +  A A F+   VKD +SWNT +   +       A
Sbjct: 461 VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGA 520

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLV 490
           I  F  M+      P++ T VS++   + +G L  G  I  ++     +  DV V + ++
Sbjct: 521 ITAFYTMQH-EGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVM 579

Query: 491 DMYGKCGR-IDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VR 546
           +M  KCG  +D+   LF ++P  R   V WN +I+ +  HG G KAL  FR M     VR
Sbjct: 580 NMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVR 639

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH-LKHYGCMVDLFGRAGHLGMAH 605
           PD  TFVS+L+ CSH+GLV +G   F + +E  GI+   ++HY C+VD+ GR G+L  A 
Sbjct: 640 PDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAE 699

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV-DSENVGYYVLMSNIYANV 664
           +FI+ MP+  D+ +W +LLGAC  +G++E G  A+    E+  S++VGY VL SNIYA  
Sbjct: 700 DFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVL-SNIYAAA 758

Query: 665 GKWEGVDEVRS-LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
           G+WE    VR  +A  R  K+ PG SSI V N+V  F+  +R+HP+ ++IY EL  L   
Sbjct: 759 GRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGL 818

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           ++  GYVPD   VL DVEE++KE +L  HSE+LAIAFG+IS P +  I++ KNLRVC DC
Sbjct: 819 IREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDC 878

Query: 784 HNWTKFISQITEREIIVRDSNRFHHF-KDGICSCGDYW 820
           H  TKFI+++T+REI VRD NRFHHF KDG CSCGDYW
Sbjct: 879 HTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/546 (28%), Positives = 273/546 (50%), Gaps = 26/546 (4%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  SC   + L   + +HA +   G +  V  +T LV  Y   G +  S   F+ ++
Sbjct: 236 FVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMA 295

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC-----RNLVD 161
            RN  +WN+MI+ + +CG  S A   +++     G RP+  TF   LKA      ++L +
Sbjct: 296 VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ-QEGFRPNKITFVTALKAACSSSSQDLGE 354

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
              +H  +   G E DV V  +L+ MY   G  + AR  FD +P ++  SWNAM++ Y  
Sbjct: 355 SAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGD 414

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL-EFNLF 280
           +G A EA+++   M+ + ++ + ++  ++L  C   +++     IH  +V +GL      
Sbjct: 415 NGRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESS 471

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           ++N ++ M+A+ G +  A+  FD  + +D VSWN+ +AA     D   A   F TMQ  G
Sbjct: 472 IANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEG 531

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            +PD  TLVS+  + A L      RS+   +        DV++ +AV++M AK G     
Sbjct: 532 FRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDE 591

Query: 401 CA-VFEGLP--VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           C  +F  +P   KD+++WNT+I  YAQ+G   +A+++F++M++ + + P+  T+VS+L  
Sbjct: 592 CERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSG 651

Query: 458 YSHVGALRQGIKIH--ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
            SH G +  GI     AR +       V    CLVD+ G+ G + +A     ++P  + S
Sbjct: 652 CSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADS 711

Query: 515 VPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
           V W +++     +G    G++A   F ++     R D + +V L    + +G   +  R 
Sbjct: 712 VVWTSLLGACSSYGDLEGGERAARAFIELY----RSDSVGYVVLSNIYAAAGRWEDSIRV 767

Query: 572 FHMMQE 577
              M E
Sbjct: 768 REDMAE 773



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 172/666 (25%), Positives = 291/666 (43%), Gaps = 72/666 (10%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   ++LH  +V  G  +       LV  Y+    L  +   F  +  R + TWN++I+ 
Sbjct: 40  LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA 99

Query: 120 YVRCGRLSEAVDCFYQFTLTSGL--RPDFYTFPPVLKACRN---------LVDGKKIHCS 168
                  +   D + +  L      RP+  T   VL A  +             + +H  
Sbjct: 100 Q---SSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDD 156

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV-- 226
           +     E D+FVA +LL  Y + G    A ++F  + V D   WNA I   C   +    
Sbjct: 157 IRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMA-CAGNDERPD 215

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            AL ++  M LEG+  +  +  +IL  C    ++     IH  + + G   ++ V+  L+
Sbjct: 216 RALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALV 275

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY + G +  ++ VF+ M  R+ VSWN++IAA+ Q      A   +  MQQ G +P+ +
Sbjct: 276 TMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKI 335

Query: 347 TLVSL--TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           T V+    +  +   D   S ++HG+I   G    DV++G A+V MY   G I+ A A F
Sbjct: 336 TFVTALKAACSSSSQDLGESAALHGWIACAG-LEGDVMVGTALVTMYGSTGAIDRARAAF 394

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +P K+++SWN ++T Y  NG A EA+E+F  M+    + PN+ +Y+++L     V   
Sbjct: 395 DAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR-QSLAPNKVSYLAVLGCCEDVSEA 453

Query: 465 RQGIKIHARVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           R    IHA V+ N L   +  +A  +V M+ + G +++AM+ F       SV WN  ++ 
Sbjct: 454 R---SIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAA 510

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL------------------- 564
                    A+  F  M  EG RPD  T VS++  C+  G                    
Sbjct: 511 LSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVER 570

Query: 565 ------------------VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH----LG 602
                             V E +R F  M ++   +  L  +  M+  + + GH    L 
Sbjct: 571 DVVVESAVMNMVAKCGSSVDECERLFARMPDD---RKDLVAWNTMIAAYAQHGHGRKALK 627

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA---VASDRLFEVDSENVGYYVLMSN 659
           +     Q   VRPD+S + ++L  C   G +E G      +  +  ++ + V +Y  + +
Sbjct: 628 LFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVD 687

Query: 660 IYANVG 665
           +   +G
Sbjct: 688 VLGRMG 693



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 212/427 (49%), Gaps = 20/427 (4%)

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           T   +L+ C    +L  G+++H  ++K G   +  +   L+ MY +    + A   F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM---DPITVASILPVCARSDNIL 261
             R   +WN +I+   QS  A    D+   M+LE  +    + +T+ ++L   A  D   
Sbjct: 86  RSRGIATWNTLIAA--QSSPAA-VFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 262 ------SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
                    ++H  I    LE +LFV+  L++ Y K G +  AL VF ++   D++ WN+
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 202

Query: 316 IIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
            I A   +++ P  A      M   G+ P+  + V++ S     +    +RS+H  +   
Sbjct: 203 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEEL 262

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G F+ DV++  A+V MY + G ++ + AVFE + V++ +SWN +I  +AQ G  S A  +
Sbjct: 263 G-FLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAI 321

Query: 435 FQMMEECNEINPNQGTYVSILPAY--SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           +  M++     PN+ T+V+ L A   S    L +   +H  +    L  DV V T LV M
Sbjct: 322 YWRMQQ-EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTM 380

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           YG  G ID A + F  +P  + V WNA+++ +G +G+  +A+  F  M  + + P+ +++
Sbjct: 381 YGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSY 440

Query: 553 VSLLTAC 559
           +++L  C
Sbjct: 441 LAVLGCC 447



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 188/395 (47%), Gaps = 18/395 (4%)

Query: 244 PI-TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           PI T+A +L  C    ++  G  +H  IVK GL  N  + N L+ MY+K   +  A   F
Sbjct: 23  PIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAF 82

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM---QQAGIQPDLLTLVSLTSIVAQLN 359
             +  R + +WN++IAA    + P      +T M   ++A  +P+ LT++++   +A  +
Sbjct: 83  SALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGD 139

Query: 360 DCR------NSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                     +R VH  I  RG  +E D+ +  A++D Y K G + SA  VF  + V D+
Sbjct: 140 PSSSSSSRAQARIVHDDI--RGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDL 197

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           I WN  I   A N    +   +         + PN+ ++V+IL +     +L     IHA
Sbjct: 198 ICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHA 257

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
           RV +     DV VAT LV MYG+CG +D+++++F  +   + V WNA+I+     G    
Sbjct: 258 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSA 317

Query: 533 ALNFFRQMLDEGVRPDHITFVSLL-TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           A   + +M  EG RP+ ITFV+ L  ACS S          H      G++  +     +
Sbjct: 318 AFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTAL 377

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           V ++G  G +  A      +P +   S W A+L A
Sbjct: 378 VTMYGSTGAIDRARAAFDAIPAKNIVS-WNAMLTA 411


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/645 (40%), Positives = 371/645 (57%), Gaps = 37/645 (5%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN M+ G+  S + V AL++   M   G   +  +   +L  CA+S     G  IH  ++
Sbjct: 32  WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91

Query: 272 KHGLEFNLFVSNNLINMYAKFGMM-------------------------------RHALR 300
           K G   + +V  +LI+MYA+ G +                               R A +
Sbjct: 92  KLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARK 151

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD++ ERDVVSWN++I  Y ++     A   F  M +  ++PD  TLVS+ S  AQ   
Sbjct: 152 VFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGS 211

Query: 361 CRNSRSVHGFIMRRGW---FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
               R VH ++        F   + I NA++D+Y+K G + +A  +FEGL  KDV+SWNT
Sbjct: 212 IELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNT 271

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           LI GY    L  EA+ +FQ M    E  PN  T +S+LPA +H+GA+  G  IH  + K 
Sbjct: 272 LIGGYTHTNLYKEALLLFQEMLRSGEC-PNDVTLLSVLPACAHLGAIDIGRWIHVYIDKK 330

Query: 478 C--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
              +  +  + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A +
Sbjct: 331 LKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFD 390

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M    V PD ITFV LL+ACSHSGL+  G++ F  M +++ + P L+HYGCM+DL 
Sbjct: 391 LFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLL 450

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           G +G    A   I  MP+ PD  IW +LL AC+ HGN+EL    + +L +++ EN G YV
Sbjct: 451 GHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV 510

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SNIYA  G+WE V  VR +   +G+KK PG SSIEV++ V  F  G++ HP+  +IY 
Sbjct: 511 LLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYH 570

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
            L  +  +++  G+ PD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I K
Sbjct: 571 MLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 630

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLRVC +CH  TK IS+I +REI+ RD  RFHHF+DG+CSC DYW
Sbjct: 631 NLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 253/504 (50%), Gaps = 45/504 (8%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L ++   F+ I   N+  WN+M+  +        A++ + +  ++ G  P+ Y+FP +LK
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRM-VSLGHLPNSYSFPFLLK 72

Query: 155 AC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-FGLANV-------------- 196
           +C   +   +G++IH  VLKLG   D +V  SL+ MY R  GL +               
Sbjct: 73  SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132

Query: 197 ----------------ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
                           ARK+FD++  RD  SWNAMI+GY ++G   EAL++  EM    V
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYI----VKHGLEFNLFVSNNLINMYAKFGMMR 296
             D  T+ S++  CA+S +I  G  +H ++      HG   +L + N LI++Y+K G + 
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  +F+ +  +DVVSWN++I  Y  +N    A   F  M ++G  P+ +TL+S+    A
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312

Query: 357 QLNDCRNSRSVHGFIMRR-GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
            L      R +H +I ++      +  +  +++DMYAK G I +A  VF  +  + + SW
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSW 372

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N +I G+A +G A+ A ++F  M   N + P+  T+V +L A SH G L  G +I   + 
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRG-NRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMT 431

Query: 476 KNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
           ++  L   +    C++D+ G  G   +A  + + +P     V W +++     HG  + A
Sbjct: 432 QDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELA 491

Query: 534 LNFFRQMLDEGVRPDHITFVSLLT 557
            +F ++++   + P++     LL+
Sbjct: 492 ESFAQKLIK--IEPENSGSYVLLS 513



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 194/397 (48%), Gaps = 15/397 (3%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ GD   +R  FD I+ R+V +WN+MI+ YV  GR  EA++ F + 
Sbjct: 128 RDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEM 187

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL----GFEWDVFVAASLLHMYC 189
             T+ +RPD  T   V+ AC    ++  G+++H  V       GF   + +  +L+ +Y 
Sbjct: 188 MRTN-VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYS 246

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G    A  LF+ +  +D  SWN +I GY  +    EAL +  EM   G   + +T+ S
Sbjct: 247 KCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLS 306

Query: 250 ILPVCARSDNILSGLLIHLYIVK--HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           +LP CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VF+ M+ 
Sbjct: 307 VLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLY 366

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R + SWN++I  +        A   F+ M+   ++PD +T V L S  +        R +
Sbjct: 367 RSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG 426
              + +       +     ++D+    G+   A  +   +P++ D + W +L+    ++G
Sbjct: 427 FKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486

Query: 427 LASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
              E  E F   ++  +I P N G+YV +   Y+  G
Sbjct: 487 -NLELAESFA--QKLIKIEPENSGSYVLLSNIYATAG 520



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 193/405 (47%), Gaps = 41/405 (10%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  + +A+ VF+ + E +++ WN+++  +  S+DP++A   +  M   G  P+  +   L
Sbjct: 11  FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFME------------------------------DV 381
               A+       R +H  +++ G  ++                              DV
Sbjct: 71  LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A++  YA  G   SA  VF+ +  +DV+SWN +ITGY +NG   EA+E+F+ M   
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARV----IKNCLCFDVFVATCLVDMYGKCG 497
           N + P++GT VS++ A +  G++  G ++H+ V      +     + +   L+D+Y KCG
Sbjct: 191 N-VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            ++ A  LF  +     V WN +I  +       +AL  F++ML  G  P+ +T +S+L 
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309

Query: 558 ACSHSGLVSEGQRYFHMM--QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           AC+H G +  G R+ H+   ++  G+         ++D++ + G +  AH    +M  R 
Sbjct: 310 ACAHLGAIDIG-RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRS 368

Query: 616 DASIWGALLGACRIHG--NMELGAVASDRLFEVDSENVGYYVLMS 658
            +S W A++    +HG  N      +  R   V+ +++ +  L+S
Sbjct: 369 LSS-WNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLS 412


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/784 (35%), Positives = 433/784 (55%), Gaps = 18/784 (2%)

Query: 53  LFQSC--TKLHHV-KRLHALLVVSGKIKTVFSSTKLVNFYANLGD--LSFSRHTFDHISY 107
           L + C  TK  H+ K LH  L  S           L+  Y+   D   +FS       S 
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKK 164
           R+V +++S+IS +       +AV+ F Q  L  G+ P+ Y F  V++AC        G  
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177

Query: 165 IHCSVLKLG-FEWDVFVAASLLHMY---CRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           +   VLK G F+  V V   L+ M+   C       ARK+FD M  ++  +W  MI+   
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237

Query: 221 QSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           Q G   EA+D+  EM +  G   D  T+  ++ VCA    +  G  +H ++++ GL  +L
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG---FFTTM 336
            V  +L++MYAK G+++ A +VFD M E +V+SW +++  Y +            F   +
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            Q G+ P+  T   +    A L D      VHG  ++ G    D + GN +V +YAK G 
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCV-GNGLVSVYAKSGR 416

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           + SA   F+ L  K+++S   +     ++   +   ++ + +E       +  TY S+L 
Sbjct: 417 MESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGS-GVSSFTYASLLS 475

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
             + +G + +G +IHA V+K     D+ V   L+ MY KCG  + A+ +F  +   + + 
Sbjct: 476 GAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVIT 535

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W +II+    HG   KAL  F  ML+ GV+P+ +T++++L+ACSH GL+ E  ++F  M+
Sbjct: 536 WTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMR 595

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +  GI P ++HY CMVDL GR+G L  A  FI +MP   DA +W   LG+CR+H N +LG
Sbjct: 596 DNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLG 655

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
             A+  + E +  +   Y+L+SN+YA  G+WE V  +R   + + + K  G S IEV N+
Sbjct: 656 EHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQ 715

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F+ G+  HPK ++IY++L  L  K+K++GYVP+  FVL DVE+++KE  L  HSE+L
Sbjct: 716 VHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKL 775

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           A+AF +IS+P   PI++FKNLRVCGDCH   K+IS ++ REI+VRD+NRFHH KDG CSC
Sbjct: 776 AVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSC 835

Query: 817 GDYW 820
            DYW
Sbjct: 836 NDYW 839



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 167/325 (51%), Gaps = 9/325 (2%)

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           IT + +L  C R+ N   G L+H  +    L  +  + N+LI +Y+K      A  +F  
Sbjct: 53  ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112

Query: 305 M--MERDVVSWNSIIAAYEQSNDPITAHGFFTT-MQQAGIQPDLLTLVSLTSIVAQLNDC 361
           M   +RDVVS++SII+ +  + + + A   F   + Q G+ P+     ++     +    
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK---LGIINSACAVFEGLPVKDVISWNTL 418
           +    + GF+++ G+F   V +G  ++DM+ K   L  + SA  VF+ +  K+V++W  +
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           IT  AQ G   EAI++F  M   +   P++ T   ++   + +  L  G ++H+ VI++ 
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH--GIHGQGDKALNF 536
           L  D+ V   LVDMY KCG + +A  +F  +   + + W A+++ +  G  G   +A+  
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRM 352

Query: 537 FRQMLDE-GVRPDHITFVSLLTACS 560
           F  ML + GV P+  TF  +L AC+
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKACA 377


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/665 (37%), Positives = 391/665 (58%), Gaps = 3/665 (0%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           + L  GK++H  +++ G   + F++   L++Y + G  +   KLFD M  R+  SW ++I
Sbjct: 89  KELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSII 148

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +G+  +    EAL    +MR+EG       ++S+L  C     I  G  +H  +VK G  
Sbjct: 149 TGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFG 208

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             LFV +NL +MY+K G +  A + F++M  +D V W S+I  + ++ D   A   +  M
Sbjct: 209 CELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKM 268

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
               +  D   L S  S  + L      +S+H  I++ G F  +  IGNA+ DMY+K G 
Sbjct: 269 VTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLG-FEYETFIGNALTDMYSKSGD 327

Query: 397 INSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           + SA  VF+       ++S   +I GY +     +A+  F  +     I PN+ T+ S++
Sbjct: 328 MVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR-RGIEPNEFTFTSLI 386

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A ++   L  G ++H +V+K     D FV++ LVDMYGKCG  D ++ LF ++     +
Sbjct: 387 KACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEI 446

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN ++     HG G  A+  F  M+  G++P+ +TFV+LL  CSH+G+V +G  YF  M
Sbjct: 447 AWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSM 506

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           ++ +G+ P  +HY C++DL GRAG L  A +FI NMP  P+   W + LGAC+IHG+ME 
Sbjct: 507 EKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMER 566

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
              A+D+L +++ EN G +VL+SNIYA   +WE V  +R + +D  + K PG+S +++ N
Sbjct: 567 AKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRN 626

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           K  +F   + +HP+ ++IY++L NL  ++K +GYVP    VL D++++ KE +L  HSER
Sbjct: 627 KTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSER 686

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           +A+AF +++ P   PI + KNLRVC DCH+  KFIS++TER IIVRD +RFHHF +G CS
Sbjct: 687 IAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCS 746

Query: 816 CGDYW 820
           CGDYW
Sbjct: 747 CGDYW 751



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 247/484 (51%), Gaps = 15/484 (3%)

Query: 59  KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           +L+  K+LHA+L+  G +   F S   +N Y+  G+L ++   FD +S RN+ +W S+I+
Sbjct: 90  ELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIIT 149

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            +    R  EA+  F Q  +   +   F     VL+AC +L     G ++HC V+K GF 
Sbjct: 150 GFAHNSRFQEALSSFCQMRIEGEIATQF-ALSSVLQACTSLGAIQFGTQVHCLVVKCGFG 208

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            ++FV ++L  MY + G  + A K F++MP +D+  W +MI G+ ++G+  +AL    +M
Sbjct: 209 CELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKM 268

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
             + V +D   + S L  C+       G  +H  I+K G E+  F+ N L +MY+K G M
Sbjct: 269 VTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDM 328

Query: 296 RHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
             A  VF    +   +VS  +II  Y + +    A   F  +++ GI+P+  T  SL   
Sbjct: 329 VSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKA 388

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A      +   +HG +++   F  D  + + +VDMY K G+ + +  +F+ +   D I+
Sbjct: 389 CANQAKLEHGSQLHGQVVKFN-FKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIA 447

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WNTL+  ++Q+GL   AIE F  M     + PN  T+V++L   SH G +  G+   + +
Sbjct: 448 WNTLVGVFSQHGLGRNAIETFNGMIH-RGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSM 506

Query: 475 IKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQ 529
            K    + V       +C++D+ G+ G++ +A      +P   +V  W + +    IHG 
Sbjct: 507 EK---IYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGD 563

Query: 530 GDKA 533
            ++A
Sbjct: 564 MERA 567



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 193/391 (49%), Gaps = 7/391 (1%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  TVA ++   AR+  +  G  +H  +++ G   N F+SN+ +N+Y+K G + + +++F
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D+M +R++VSW SII  +  ++    A   F  M+  G       L S+      L   +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               VH  +++ G+  E + +G+ + DMY+K G ++ AC  FE +P KD + W ++I G+
Sbjct: 194 FGTQVHCLVVKCGFGCE-LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+  +  M   +++  +Q    S L A S + A   G  +HA ++K    ++
Sbjct: 253 VKNGDFKKALTAYMKMVT-DDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE 311

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRS--SSVPWNAIISCHGIHGQGDKALNFFRQM 540
            F+   L DMY K G +  A ++F Q+     S V   AII  +    Q +KAL+ F  +
Sbjct: 312 TFIGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDL 370

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              G+ P+  TF SL+ AC++   +  G +  H    +F  K        +VD++G+ G 
Sbjct: 371 RRRGIEPNEFTFTSLIKACANQAKLEHGSQ-LHGQVVKFNFKRDPFVSSTLVDMYGKCGL 429

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
              +      +   PD   W  L+G    HG
Sbjct: 430 FDHSIQLFDEIE-NPDEIAWNTLVGVFSQHG 459


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/818 (33%), Positives = 429/818 (52%), Gaps = 73/818 (8%)

Query: 38  PDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLS 96
           P+ L+N +       L     +L+ V  + A +V +G    T  S+ ++ NF  N G+LS
Sbjct: 6   PNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKN-GELS 64

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF---------------------YQ 135
            +R  F+ + ++N  + N MIS YV+ G L EA   F                      Q
Sbjct: 65  QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ 124

Query: 136 FTLT---------SGLRPDFYTFPPVLKACRNLVDGKKI---HCSVLKLGFEWDVFVAAS 183
           F             G  PD+ TF  +L  C     G +I      ++KLG++  + V  +
Sbjct: 125 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNT 184

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+  YC+    ++A +LF +MP                                    +D
Sbjct: 185 LVDSYCKSNRLDLACQLFKEMP-----------------------------------EID 209

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T A++L      D+I+ G  IH +++K    +N+FVSN L++ Y+K   +  A ++FD
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           +M E+D VS+N II+ Y        A   F  +Q            ++ SI +   D   
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R +H   +      E +++GN++VDMYAK G    A  +F  L  +  + W  +I+ Y 
Sbjct: 330 GRQIHAQTIVTTADSE-ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYV 388

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q G   E +++F  M + + I  +Q T+ S+L A + + +L  G ++H+ +IK+    +V
Sbjct: 389 QKGFYEEGLQLFNKMRQASVI-ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNV 447

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           F  + L+D+Y KCG I DA+  F ++P  + V WNA+IS +  +G+ +  L  F++M+  
Sbjct: 448 FSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLS 507

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           G++PD ++F+ +L+ACSHSGLV EG  +F+ M + + + P  +HY  +VD+  R+G    
Sbjct: 508 GLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNE 567

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYA 662
           A   +  MP+ PD  +W ++L ACRIH N EL   A+D+LF ++   +   YV MSNIYA
Sbjct: 568 AEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYA 627

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             G+WE V +V    RDRG+KK P +S +E+ ++  +F   +R HP+ E+I  ++  LT 
Sbjct: 628 AAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTK 687

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
            M+ LGY PD S  L + +E  K   L  HSERLAIAF +IS+P  SPI + KNLR C D
Sbjct: 688 TMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACID 747

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH   K IS+I  REI VRDS RFHHF+DG CSCGD+W
Sbjct: 748 CHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/669 (39%), Positives = 374/669 (55%), Gaps = 38/669 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           VL    +L   + +H  ++     ++  +   L+  Y        ARK+FD++P R+   
Sbjct: 49  VLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVII 108

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
            N MI  Y  +G   E + +   M    V  D  T   +L  C+ S NI+ G  IH    
Sbjct: 109 INVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSAT 168

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K GL   LFV N L++MY K G +  A  V D+M  RDVVSWNS++A Y Q+     A  
Sbjct: 169 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALE 228

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
               M+   I  D  T+ SL   V+                      E+V+    V DM+
Sbjct: 229 VCREMESVKISHDAGTMASLLPAVSNTT------------------TENVMY---VKDMF 267

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K+G              K ++SWN +I  Y +N +  EA+E++  ME  +   P+  + 
Sbjct: 268 FKMG-------------KKSLVSWNVMIGVYMKNAMPVEAVELYSGME-ADGFEPDAVSI 313

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+LPA     AL  G KIH  + +  L  ++ +   L+DMY KCG +D A  +F  +  
Sbjct: 314 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKS 373

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V W A+IS +G  G+G  A+  F +M D G+ PD I FV+ L ACSH+GL+ EG+  
Sbjct: 374 RDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 433

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F +M + + I P L+H  CMVDL GRAG +  A+ FIQ MP+ P+  +WGALLGACR+H 
Sbjct: 434 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHS 493

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           N ++G +A+D+LF++  E  GYYVL+SNIYA  G+WE V  +R++ + +GLKK PG S++
Sbjct: 494 NTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNV 553

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           EVN  +  F  G+R+HP+  +IY EL  L  KMK LGYVPD    L DVEE++KE  L  
Sbjct: 554 EVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAV 613

Query: 752 HSERLAIAFGIISSPPK---SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
           HSE+LAI F ++++  +   + I+I KNLR+CGDCH   K ISQIT REII+RD+NRFH 
Sbjct: 614 HSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHV 673

Query: 809 FKDGICSCG 817
           F+ G+CSC 
Sbjct: 674 FRFGVCSCA 682



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 235/464 (50%), Gaps = 57/464 (12%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL+  YA+L D++ +R  FD I  RNV   N MI  YV  G   E +  F     +  ++
Sbjct: 80  KLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMC-SCHVK 138

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YTFP VLKAC    N+V GKKIH S  K+G    +FV   L+ MY + G  + AR +
Sbjct: 139 PDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 198

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            D+M  RD  SWN++++GY Q+    +AL++  EM    +S D  T+AS+LP  + +   
Sbjct: 199 LDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--- 255

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                                + N+  MY K         +F +M ++ +VSWN +I  Y
Sbjct: 256 --------------------TTENV--MYVK--------DMFFKMGKKSLVSWNVMIGVY 285

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            ++  P+ A   ++ M+  G +PD +++ S+       +     + +HG+I R+   + +
Sbjct: 286 MKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK-LIPN 344

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +++ NA++DMYAK G ++ A  VFE +  +DV+SW  +I+ Y  +G   +A+ +F  M++
Sbjct: 345 LLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQD 404

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVAT-------CLVD 491
              + P+   +V+ L A SH G L +G        ++C  L  D +  T       C+VD
Sbjct: 405 SGLV-PDSIAFVTTLAACSHAGLLEEG--------RSCFKLMTDHYKITPRLEHLACMVD 455

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
           + G+ G++ +A     ++P   +   W A++    +H   D  L
Sbjct: 456 LLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGL 499



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 35/349 (10%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H      G   T+F    LV+ Y   G LS +R   D +S R+V +WNS+++ Y + 
Sbjct: 161 KKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQN 220

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
            R  +A                       L+ CR +   K  H          D    AS
Sbjct: 221 QRFDDA-----------------------LEVCREMESVKISH----------DAGTMAS 247

Query: 184 LLHMYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
           LL         NV   + +F  M  +   SWN MI  Y ++   VEA+++   M  +G  
Sbjct: 248 LLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFE 307

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D +++ S+LP C  +  +  G  IH YI +  L  NL + N LI+MYAK G +  A  V
Sbjct: 308 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDV 367

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F+ M  RDVVSW ++I+AY  S     A   F+ MQ +G+ PD +  V+  +  +     
Sbjct: 368 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLL 427

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
              RS    +         +     +VD+  + G +  A    + +P++
Sbjct: 428 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPME 476


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 278/765 (36%), Positives = 417/765 (54%), Gaps = 17/765 (2%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYV 121
             +  H  +  SG ++ V     +++ YA  G  S +   F  I ++ +V +WN+M+    
Sbjct: 354  ARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASE 413

Query: 122  RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW-D 177
                  + V+ F+   L +G+ P+  +F  +L AC N   L  G+KIH  +L    ++ +
Sbjct: 414  DRKSFGKVVNTFHHMLL-AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 178  VFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEM 235
              VA  L+ MY + G  + A  +F +MP+  R   +WN M+  Y Q+  + EA   L EM
Sbjct: 473  SSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 236  RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
               GV  D ++  S+L  C  S       ++ + I++ G   +  +   LI+M+ +   +
Sbjct: 533  LQGGVLPDALSFTSVLSSCYCSQE---AQVLRMCILESGYR-SACLETALISMHGRCREL 588

Query: 296  RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
              A  VF++M   DVVSW ++++A  ++ D    H  F  MQ  G+ PD  TL +     
Sbjct: 589  EQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 356  AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
                     + +H  +   G    D+ + NA+++MY+  G    A + FE +  +D++SW
Sbjct: 649  LASTTLGLGKVIHACVTEIG-LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSW 707

Query: 416  NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            N +   YAQ GLA EA+ +F+ M+    + P++ T+ + L        +  G   HA   
Sbjct: 708  NIMSAAYAQAGLAKEAVLLFRQMQ-LEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAA 766

Query: 476  KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
            ++ L  DV VAT LV +Y KCG++D+AMSLF      + V  NAII     HG  ++A+ 
Sbjct: 767  ESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVK 826

Query: 536  FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
             F +M  EGVRPD  T VS+++AC H+G+V EG   F  M+E FGI P L+HY C VDL 
Sbjct: 827  MFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLL 886

Query: 596  GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
            GRAG L  A   I+ MP   +  +W +LLG C++ G+ ELG   + R+ E+D  N   +V
Sbjct: 887  GRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHV 946

Query: 656  LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
            ++SNIY   GKW+  D  R    D  +K  PG S  E+  +V  F  G+R+HPK ++IY 
Sbjct: 947  VLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYV 1006

Query: 716  ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
             L  L   M+  GY  DK     DVE++ KE  L  HSER+AIAFG+I++PP++ ++I K
Sbjct: 1007 VLDKLELLMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVK 1063

Query: 776  NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            NLRVCGDCH  TK+IS +  REIIVRDS RFHHF +G CSC D W
Sbjct: 1064 NLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 199/668 (29%), Positives = 310/668 (46%), Gaps = 54/668 (8%)

Query: 49  DFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           ++  L QSC     L   K  H L+  +G  + +F    L+N Y   G L  +   F  +
Sbjct: 27  EYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKM 86

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             RNV +W ++IS   +CG  + A   F    L S   P+ YT   +L AC   R+L  G
Sbjct: 87  EERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIG 146

Query: 163 KKIHCSVLKLGFE----WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           + IH  + +LG E        V  ++++MY + G    A  +F  +P +D  SW AM   
Sbjct: 147 RSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGA 206

Query: 219 YCQSGNAV-EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           Y Q      +AL I  EM L+ ++ + IT  + L  C    ++  G  +H  + +  L F
Sbjct: 207 YAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEASLGF 263

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMER---DVVSWNSIIAAYEQSNDPITAHGFFT 334
           +   SN LINMY K G    A  VF  M  R   D+VSWN++I+A  ++     A   F 
Sbjct: 264 DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 335 TMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
            ++  G++P+ +TL++ L ++ A   D   +R  HG I   G ++ DV+IGNA++ MYAK
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESG-YLRDVVIGNAIISMYAK 382

Query: 394 LGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
            G  ++A AVF  +  K DVISWNT++          + +  F  M     I+PN+ +++
Sbjct: 383 CGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG-IDPNKVSFI 441

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQ--V 509
           +IL A S+  AL  G KIH+ ++     + +  VAT LV MYGKCG I +A  +F +  +
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPL 501

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL------------- 556
           P  S V WN ++  +  + +  +A     +ML  GV PD ++F S+L             
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLR 561

Query: 557 ---------TACSHSGLVSEGQRYFHMMQEE--FGIKPH--LKHYGCMVDLFGRAGHLGM 603
                    +AC  + L+S   R   + Q    F    H  +  +  MV           
Sbjct: 562 MCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKE 621

Query: 604 AHNFIQNMPVR---PDASIWGALLGACRIHGNMELGAVASDRLFEVDSE-NVGYYVLMSN 659
            HN  + M +    PD       L  C     + LG V    + E+  E ++     + N
Sbjct: 622 VHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLN 681

Query: 660 IYANVGKW 667
           +Y+N G W
Sbjct: 682 MYSNCGDW 689



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 16/285 (5%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D   + T L   K +HA +   G    +     L+N Y+N GD   +   F+ +  R++ 
Sbjct: 646 DTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLV 705

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCS 168
           +WN M + Y + G   EAV  F Q  L  G++PD  TF   L        + DGK  H  
Sbjct: 706 SWNIMSAAYAQAGLAKEAVLLFRQMQL-EGVKPDKLTFSTTLNVSGGSALVSDGKLFHAL 764

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW-----NAMISGYCQSG 223
             + G + DV VA  L+ +Y + G  + A  LF     R +  W     NA+I    Q G
Sbjct: 765 AAESGLDSDVSVATGLVKLYAKCGKLDEAMSLF-----RGACDWTVVLLNAIIGALAQHG 819

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVS 282
            + EA+ +  +M+ EGV  D  T+ SI+  C  +  +  G    L + ++ G+   L   
Sbjct: 820 FSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHY 879

Query: 283 NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDP 326
              +++  + G + HA ++  +M  E + + W S++   +   D 
Sbjct: 880 ACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDA 924


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/721 (37%), Positives = 397/721 (55%), Gaps = 78/721 (10%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGNAVEALDILDE 234
           D+    +L+  +   G +N+AR++F   P  +RD+  +NAMI+GY  + +   A+++  +
Sbjct: 80  DIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRD 139

Query: 235 MRLEGVSMDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           +   G   D  T  S+L   A   ++      IH  +VK G  F   V N L++++ K  
Sbjct: 140 LLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCA 199

Query: 294 M---------MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA--------------- 329
                     M  A ++FD+M ERD +SW ++IA Y ++ +   A               
Sbjct: 200 SSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAW 259

Query: 330 ---------HGFF-------TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
                    HGFF         M   GIQ D  T  S+ S  A      + + VH +I+R
Sbjct: 260 NAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILR 319

Query: 374 ---RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY-------- 422
              R      + + NA+  +Y K G ++ A  VF  +PVKD++SWN +++GY        
Sbjct: 320 TEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDE 379

Query: 423 -----------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
                                  AQNG   E++++F  M+      P    +   + A +
Sbjct: 380 AKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKS-EGFEPCDYAFAGAIIACA 438

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            + AL  G ++HA++++      +     L+ MY KCG ++ A  LF  +P   SV WNA
Sbjct: 439 WLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNA 498

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+  G HG G +AL  F  ML E + PD ITF+++L+ CSH+GLV EG RYF  M   +
Sbjct: 499 MIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLY 558

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P   HY  M+DL  RAG    A + I+ MPV P   IW ALL  CRIHGNM+LG  A
Sbjct: 559 GICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQA 618

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           ++RLFE+  ++ G YVL+SN+YA VG+W+ V +VR L RD+G+KK PG S IEV NKV +
Sbjct: 619 AERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHV 678

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F   +  HP+ + +Y+ L  L  KM+ LGY+PD  FVL D+E ++KE++L++HSE+LA+ 
Sbjct: 679 FLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVG 738

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++  P  + +++FKNLR+CGDCHN  KF+S++ EREI+VRD  RFHHFK+G CSCG+Y
Sbjct: 739 FGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNY 798

Query: 820 W 820
           W
Sbjct: 799 W 799



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 159/598 (26%), Positives = 273/598 (45%), Gaps = 97/598 (16%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTF--DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + T L+  +++ G+ + +R  F    +  R+   +N+MI+ Y        A++ F   
Sbjct: 81  IVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDL 140

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            L +G RPD +TF  VL A   +V+ +K    IHC+V+K G  +   V  +LL ++ +  
Sbjct: 141 -LRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCA 199

Query: 193 LAN---------VARKLFDDMPVRDSGSW------------------------------- 212
            +           ARKLFD+M  RD  SW                               
Sbjct: 200 SSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAW 259

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NAMISGY   G  +EAL++  +M L G+  D  T  S+L  CA +   L G  +H YI++
Sbjct: 260 NAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILR 319

Query: 273 H----GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
                 L+F+L V+N L  +Y K G +  A +VF+QM  +D+VSWN+I++ Y  +     
Sbjct: 320 TEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDE 379

Query: 329 AHGF-------------------------------FTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A  F                               F  M+  G +P            A 
Sbjct: 380 AKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAW 439

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L    + R +H  ++R G F   +  GNA++ MYAK G++ +A  +F  +P  D +SWN 
Sbjct: 440 LAALMHGRQLHAQLVRLG-FDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNA 498

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG---IKIHARV 474
           +I    Q+G  ++A+E+F++M +  +I P++ T++++L   SH G + +G    K  + +
Sbjct: 499 MIAALGQHGHGAQALELFELMLK-EDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGL 557

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKA 533
              C   D +    ++D+  + G+  +A  +   +P     P W A+++   IHG  D  
Sbjct: 558 YGICPGEDHYAR--MIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLG 615

Query: 534 LNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           +    ++ +  + P H  T+V L    +  G   +  +   +M+++ G+K   K  GC
Sbjct: 616 IQAAERLFE--LMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDK-GVK---KEPGC 667



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 8/214 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L+  C K+   +++   +     +K + S   +++ Y N G +  ++  F+ +  RN+ T
Sbjct: 339 LYWKCGKVDEARQVFNQM----PVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLT 394

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           W  MIS   + G   E++  F +   + G  P  Y F   + AC     L+ G+++H  +
Sbjct: 395 WTVMISGLAQNGFGEESLKLFNRMK-SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++LGF+  +    +L+ MY + G+   A  LF  MP  DS SWNAMI+   Q G+  +AL
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQAL 513

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           ++ + M  E +  D IT  ++L  C+ +  +  G
Sbjct: 514 ELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG 547


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/746 (36%), Positives = 422/746 (56%), Gaps = 36/746 (4%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y+++  L  S   F+ + +     W S+I  Y   G   +++  F    L SGL PD  
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGM-LASGLYPDHN 109

Query: 148 TFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV-------A 197
            FP VLKAC  L+D   G+ +H  ++++G ++D++   +L++MY +             A
Sbjct: 110 VFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGA 169

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            ++ D+M  R      A +      GN  +   + D   +E  + D         V  RS
Sbjct: 170 SQVLDEMTERTRSVRTASV----LVGN--QGRKVSD---IEAFNYD---------VSCRS 211

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNL---INMYAKFGMMRHALRVFDQMMERDVVSWN 314
               + +L   Y  K   E+    + NL   I   +    +    ++F+ M E+D+VSWN
Sbjct: 212 REFEAQVLEIDY--KPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWN 269

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +IIA   ++            M  A ++PD  TL S+  ++A+  D    + +HG  +R+
Sbjct: 270 TIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQ 329

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G   E V + ++++DMYAK   +  +  VF  L  +D ISWN++I G  QNGL  E ++ 
Sbjct: 330 GLDAE-VYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKF 388

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F+ M    +I P   ++ SI+PA +H+  L  G ++H  + +N    ++F+A+ LVDMY 
Sbjct: 389 FRQMLMA-KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 447

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           KCG I  A  +F ++     V W A+I    +HG    A+  F QM  EG+ P+++ F++
Sbjct: 448 KCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMA 507

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +LTACSH+GLV E  +YF+ M  +FGI P ++HY  + DL GRAG L  A++FI  MP+ 
Sbjct: 508 VLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIG 567

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P  S+W  LL ACR+H N+++    ++R+ EVD +N G Y+L++NIY+   +W+   + R
Sbjct: 568 PTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKWR 627

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
           +  R  G++KTP  S IEV NKV  F  G+ +HP YEKI + +  L   M+  GYVPD S
Sbjct: 628 ASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDTS 687

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
            V  DVEE++K++++ SHSERLAI FGII++P  + I++ KNLRVC DCH  TKFIS+I 
Sbjct: 688 EVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKIV 747

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
            REI+VRD++RFHHFK+G CSCGDYW
Sbjct: 748 GREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 197/415 (47%), Gaps = 15/415 (3%)

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFS------RHTFDHISYRNVYTWNSMISVYVR 122
           +L +  K ++ +   +  N    + D+S S      R  F+ +  +++ +WN++I+   R
Sbjct: 218 VLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNAR 277

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
            G   E +    +    + L+PD +T   VL      VD   GK+IH   ++ G + +V+
Sbjct: 278 NGLYGETLTMVREMG-GANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVY 336

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           VA+SL+ MY +      + ++F  +  RD  SWN++I+G  Q+G   E L    +M +  
Sbjct: 337 VASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK 396

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +     + +SI+P CA    +  G  +H YI ++G + N+F++++L++MYAK G +R A 
Sbjct: 397 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAR 456

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           ++FD+M  RD+VSW ++I         + A   F  M+  GI+P+ +  +++ +  +   
Sbjct: 457 QIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAG 516

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 418
               +      +         V    AV D+  + G +  A     G+P+    S W TL
Sbjct: 517 LVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATL 576

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHA 472
           ++    +     A +V   +    E++P N G Y+ +   YS     ++  K  A
Sbjct: 577 LSACRVHKNVDMAEKVANRIL---EVDPKNTGAYILLANIYSAARRWKEAAKWRA 628



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 112/197 (56%), Gaps = 4/197 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   +  G    V+ ++ L++ YA    +  S   F  ++ R+  +WNS+I+  V+ 
Sbjct: 320 KEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQN 379

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   E +  F Q  L + ++P  Y+F  ++ AC +L     GK++H  + + GF+ ++F+
Sbjct: 380 GLFDEGLKFFRQM-LMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 438

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A+SL+ MY + G    AR++FD M +RD  SW AMI G    G+A++A+++ ++M+ EG+
Sbjct: 439 ASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGI 498

Query: 241 SMDPITVASILPVCARS 257
             + +   ++L  C+ +
Sbjct: 499 EPNYVAFMAVLTACSHA 515



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 9/183 (4%)

Query: 44  ESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           + +   F  +  +C   T LH  K+LH  +  +G  + +F ++ LV+ YA  G++  +R 
Sbjct: 398 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQ 457

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            FD +  R++ +W +MI      G   +A++ F Q   T G+ P++  F  VL AC +  
Sbjct: 458 IFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMK-TEGIEPNYVAFMAVLTACSHAG 516

Query: 159 LVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAM 215
           LVD   K  +   L  G    V   A++  +  R G    A      MP+  +GS W  +
Sbjct: 517 LVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATL 576

Query: 216 ISG 218
           +S 
Sbjct: 577 LSA 579



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           Q  ++HA+V+K      +   + L+ +Y     + D++ LF  +    ++ W ++I C+ 
Sbjct: 26  QAQQLHAQVLK-FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYT 84

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            HG   K+L  F  ML  G+ PDH  F S+L AC+
Sbjct: 85  SHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/644 (38%), Positives = 385/644 (59%), Gaps = 6/644 (0%)

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSG--SWNAMISGYCQSGNAVEALDILDEMR 236
            +++ L   Y R G    A       P   S   +WNA+++ + +  +  EAL +   + 
Sbjct: 37  ILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALP 96

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
                 D  T    L  CAR  ++ +G ++       G   ++FV ++++N+YAK G M 
Sbjct: 97  -PAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMD 155

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A++VFD+M +RD V+W++++  +  +  P+ A   +  M++ G++ D + +V +    A
Sbjct: 156 DAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACA 215

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
              D R   SVHG+++R    M DV+I  ++VDMYAK G+ + A  VFE +P ++ +SW+
Sbjct: 216 ATGDARMGASVHGYLLRHAMQM-DVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWS 274

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            LI+  AQ G A EA+ +F+MM+  + ++PN G  V  L A S +G L+ G  IH  +++
Sbjct: 275 ALISQLAQYGNADEALGLFRMMQ-VSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILR 333

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             L  D  V T ++DMY KCG +  A  LF +V     + WN +I+C G HG+G  AL+ 
Sbjct: 334 T-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSL 392

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F++M    VRPDH TF SLL+A SHSGLV EG+ +F+ M  E+GI+P  KH  C+VDL  
Sbjct: 393 FQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLA 452

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           R+G +  A+  + ++  +P  SI  ALL  C  +  +ELG   ++++ E+   +VG   L
Sbjct: 453 RSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLAL 512

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SN+YA    W  V EVR L +D G KK PG SSIE+   +  F   +++HP++ +I   
Sbjct: 513 VSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQM 572

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           +  L ++M+ +GY+P   FV  D+EE  KE +L+ HSERLA AFG++++ P + + + KN
Sbjct: 573 VMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKN 632

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH+  K++S+I +REI+VRD+ RFHHFKDG CSCGDYW
Sbjct: 633 LRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 250/466 (53%), Gaps = 24/466 (5%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKT--VFSSTKLVNFYANLGDLSFSRHTFDH--ISYR 108
           L  SC  L  + RLHALL+VS       + SS  L   YA  GDL+ +  T      S  
Sbjct: 9   LLSSCAALRTLTRLHALLIVSSSASCHHILSSC-LATAYARAGDLAAAESTLATAPTSPS 67

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           ++  WN++++ + R     EA+  F    L    RPD  TF   L AC  L D   G+ +
Sbjct: 68  SIPAWNALLAAHSRGASPHEALRVFR--ALPPAARPDSTTFTLALSACARLGDLATGEVV 125

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
                  G+  D+FV +S+L++Y + G  + A K+FD M  RD  +W+ M++G+  +G  
Sbjct: 126 TDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQP 185

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           V+A+++   MR +G+  D + +  ++  CA + +   G  +H Y+++H ++ ++ +S +L
Sbjct: 186 VQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSL 245

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MYAK G+   A RVF+ M  R+ VSW+++I+   Q  +   A G F  MQ +G+ P+ 
Sbjct: 246 VDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNS 305

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
             +V      + L   +  +S+HGFI+R      D ++G AV+DMY+K G ++SA  +F+
Sbjct: 306 GPVVGALLACSDLGLLKLGKSIHGFILRT--LELDRMVGTAVIDMYSKCGSLSSAQMLFD 363

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  +D+ISWN +I     +G   +A+ +FQ M+  NE+ P+  T+ S+L A SH G + 
Sbjct: 364 KVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKR-NEVRPDHATFASLLSALSHSGLVE 422

Query: 466 QGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSL 505
           +G     +   NC+  +  +        C+VD+  + G +++A  L
Sbjct: 423 EG-----KFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGL 463


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/642 (40%), Positives = 364/642 (56%), Gaps = 34/642 (5%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN M+ G   S + V  L++   M   G   +  T   +L  CA+S     G  IH  ++
Sbjct: 51  WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110

Query: 272 KHGLEFNLFVSNNLINMYAKFGMM-------------------------------RHALR 300
           K G E + +   +LI+MYA+ G +                               R A +
Sbjct: 111 KLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARK 170

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD + ERDVVSWN++I  Y ++     A   F  M +  ++PD  TLVS+ S  AQ   
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H  +     F   + I NA + +Y+K G +  A  +FEGL  KDV+SWNTLI 
Sbjct: 231 IELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIG 290

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-- 478
           GY    L  EA+ +FQ M    E +PN  T +S+LPA +H+GA+  G  IH  + K    
Sbjct: 291 GYTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKG 349

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +     + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A + F 
Sbjct: 350 VTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFS 409

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M   G+ PD IT V LL+ACSHSGL+  G+  F  + +++ I P L+HYGCM+DL G A
Sbjct: 410 RMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHA 469

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G    A   I  MP+ PD  IW +LL AC++HGN+EL    + +L E++ EN G YVL+S
Sbjct: 470 GLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLS 529

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           NIYA  G+WE V  +R +   +G+KK PG SSIE+++ V  F  G++ HP+  +IY  L 
Sbjct: 530 NIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLE 589

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + + KNLR
Sbjct: 590 EMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLR 649

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           VC +CH  TK IS+I +REI+ RD  RFHHF+DG+CSC DYW
Sbjct: 650 VCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 261/535 (48%), Gaps = 51/535 (9%)

Query: 67  HALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           HA +V +G   T ++ +KL+       +   L ++   F+     N+  WN+M+      
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
             L   ++ + +  ++ G  P+ YTFP +LK+C   +   +G++IH  V+KLG E D + 
Sbjct: 62  SDLVSPLEMYVRM-VSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 181 AASLLHMYCRFGL-------------------------------ANVARKLFDDMPVRDS 209
             SL+ MY R G                                   ARK+FD +  RD 
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SWNAMI+GY ++    EAL++  EM    V  D  T+ S+L  CA+S +I  G  IH  
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240

Query: 270 IVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           +   HG   +L + N  I +Y+K G +  A  +F+ +  +DVVSWN++I  Y   N    
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA-- 386
           A   F  M ++G  P+ +T++S+    A L      R +H +I +R   ++ V  G+A  
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKR---LKGVTNGSALR 357

Query: 387 --VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
             ++DMYAK G I +A  VF  +  K + SWN +I G+A +G A+ A ++F  M + N I
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK-NGI 416

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAM 503
            P+  T V +L A SH G L  G  I   V ++  +   +    C++D+ G  G   +A 
Sbjct: 417 EPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAE 476

Query: 504 SLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            + + +P     V W +++    +HG  + A +F +++++  + P++     LL+
Sbjct: 477 EIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLME--IEPENSGSYVLLS 529



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 195/394 (49%), Gaps = 12/394 (3%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ GD+  +R  FD I+ R+V +WN+MI+ YV      EA++ F + 
Sbjct: 147 RDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEM 206

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFG 192
             T+ +RPD  T   VL AC    ++  G++IH  V    GF   + +  + + +Y + G
Sbjct: 207 MRTN-VRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
              +A  LF+ +  +D  SWN +I GY       EAL +  EM   G S + +T+ S+LP
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 325

Query: 253 VCARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
            CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VF+ MM + +
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
            SWN++I  +        A   F+ M++ GI+PD +TLV L S  +        R +   
Sbjct: 386 SSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS 445

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLAS 429
           + +       +     ++D+    G+   A  +   +P++ D + W +L+     +G   
Sbjct: 446 VTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG-NL 504

Query: 430 EAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           E  E F   ++  EI P N G+YV +   Y+  G
Sbjct: 505 ELAESFA--QKLMEIEPENSGSYVLLSNIYATAG 536


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/704 (37%), Positives = 401/704 (56%), Gaps = 36/704 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 209
           +++ C +L   K+ H  +++ G   D + A+ L  M      A++  ARK+FD++P  +S
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95

Query: 210 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
            +WN +I  Y    + V ++   LD +       +  T   ++   A   ++  G  +H 
Sbjct: 96  FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             VK  +  ++FV+N+LI+ Y   G +  A +VF  + E+DVVSWNS+I  + Q   P  
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M+   ++   +T+V + S  A++ +    R V  +I        ++ + NA++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAML 274

Query: 389 DMYAKLGIINSACAVFEGL-------------------------------PVKDVISWNT 417
           DMY K G I  A  +F+ +                               P KD+++WN 
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           LI+ Y QNG  +EA+ VF  ++    +  NQ T VS L A + VGAL  G  IH+ + K+
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            +  +  V + L+ MY KCG ++ +  +F  V +     W+A+I    +HG G++A++ F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +M +  V+P+ +TF ++  ACSH+GLV E +  FH M+  +GI P  KHY C+VD+ GR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           +G+L  A  FI+ MP+ P  S+WGALLGAC+IH N+ L  +A  RL E++  N G +VL+
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SNIYA +GKWE V E+R   R  GLKK PG SSIE++  +  F +G+  HP  EK+Y +L
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
             +  K+KS GY P+ S VLQ +EE+E KE  L  HSE+LAI +G+IS+     I++ KN
Sbjct: 635 HEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKN 694

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH+  K ISQ+ +REIIVRD  RFHHF++G CSC D+W
Sbjct: 695 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 181/652 (27%), Positives = 305/652 (46%), Gaps = 72/652 (11%)

Query: 18  PLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIK 77
           PL     P FS   N  Q  P      SR I    L + C  L  +K+ H  ++ +G   
Sbjct: 9   PLSLPRHPNFS---NPNQ--PTTNNERSRHIS---LIERCVSLRQLKQTHGHMIRTGTFS 60

Query: 78  TVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
             +S++KL    A  +   L ++R  FD I   N + WN++I  Y        ++  F  
Sbjct: 61  DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120

Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
               S   P+ YTFP ++KA     +L  G+ +H   +K     DVFVA SL+H Y   G
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + A K+F  +  +D  SWN+MI+G+ Q G+  +AL++  +M  E V    +T+  +L 
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME----- 307
            CA+  N+  G  +  YI ++ +  NL ++N +++MY K G +  A R+FD M E     
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300

Query: 308 --------------------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAG 340
                                     +D+V+WN++I+AYEQ+  P  A   F  +Q Q  
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++ + +TLVS  S  AQ+      R +H +I + G  M +  + +A++ MY+K G +  +
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM-NFHVTSALIHMYSKCGDLEKS 419

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +  +DV  W+ +I G A +G  +EA+++F  M+E N + PN  T+ ++  A SH
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN-VKPNGVTFTNVFCACSH 478

Query: 461 VGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPW 517
            G + +   +  ++  N  +  +     C+VD+ G+ G ++ A+       +P S+SV W
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV-W 537

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPD--HITFVSLLTACSHSGLVSEGQRYFHMM 575
            A++    IH   + A     ++L+   R D  H+   ++         VSE +++  + 
Sbjct: 538 GALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597

Query: 576 QEEFGIKPHLKHYGCM---VDLFGRAGHLGMAHNFIQNMPVRP-DASIWGAL 623
               G+K   K  GC    +D        GM H F+      P    ++G L
Sbjct: 598 ----GLK---KEPGCSSIEID--------GMIHEFLSGDNAHPMSEKVYGKL 634


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/591 (41%), Positives = 369/591 (62%), Gaps = 7/591 (1%)

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV-KHGLEFNLFV 281
           G  + ALD++    L     D    + +L  C R   +  G ++H ++V  H L+ +L +
Sbjct: 69  GTGLYALDLIQRGSL---VPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N ++NMYAK G +  A R+FD+M  +D+V+W ++IA + Q+N P  A   F  M + G 
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGF 185

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           QP+  TL SL       +       +H F ++ G +   V +G+A+VDMYA+ G +++A 
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG-YQSSVYVGSALVDMYARCGHMDAAQ 244

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F+G+P K  +SWN LI+G+A+ G    A+ +   M+  N   P   TY S+L A + +
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN-FQPTHFTYSSVLSACASI 303

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL QG  +HA +IK+ L    F+   L+DMY K G IDDA  +F ++ +   V WN ++
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           +    HG G + L+ F QML  G+ P+ I+F+ +LTACSHSGL+ EG  YF +M++ + +
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKV 422

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P + HY   VDL GR G L  A  FI+ MP+ P A++WGALLGACR+H NMELG  A++
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAE 482

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           R FE+D  + G  +L+SNIYA+ G+W  V +VR + ++ G+KK P  S +E+ N V +F 
Sbjct: 483 RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFV 542

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
             + THP+ ++I  +   ++ K+K +GYVPD S VL  V++ E+E  L  HSE+LA+AF 
Sbjct: 543 ANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFA 602

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           ++++P  SPI+I KN+RVCGDCH   KF+S++ +REIIVRD+NRFH F+DG
Sbjct: 603 LLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 199/383 (51%), Gaps = 20/383 (5%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHI 105
           +  L + CT+L  V++   +HA LV S  +   +     +VN YA  G L  +R  FD +
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             +++ TW ++I+ + +  R  +A+  F Q  L  G +P+ +T   +LKA      L  G
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQM-LRLGFQPNHFTLSSLLKASGSEHGLDPG 208

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            ++H   LK G++  V+V ++L+ MY R G  + A+  FD MP +   SWNA+ISG+ + 
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G    AL +L +M+ +       T +S+L  CA    +  G  +H +++K GL+   F+ 
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++MYAK G +  A RVFD++++ DVVSWN+++    Q          F  M + GI+
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388

Query: 343 PDLLTLVSLTSIVAQLNDCRNS----RSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGII 397
           P+ ++ + +      L  C +S      ++ F + + + +E DV      VD+  ++G++
Sbjct: 389 PNEISFLCV------LTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442

Query: 398 NSACAVFEGLPVKDVIS-WNTLI 419
           + A      +P++   + W  L+
Sbjct: 443 DRAERFIREMPIEPTAAVWGALL 465



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 6/176 (3%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   K +HA ++ SG     F    L++ YA  G +  ++  FD +   +V +WN+
Sbjct: 302 SIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNT 361

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK-L 172
           M++   + G   E +D F Q  L  G+ P+  +F  VL AC +  L+D    +  ++K  
Sbjct: 362 MLTGCAQHGLGKETLDRFEQM-LRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKY 420

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVE 227
             E DV    + + +  R GL + A +   +MP+  + + W A++ G C+    +E
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL-GACRMHKNME 475


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/769 (35%), Positives = 425/769 (55%), Gaps = 22/769 (2%)

Query: 64  KRLHALLVVSGKIKTV--FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           + +HA +V  G +  +  F +  L+N YA LG L+ +R  FD +  RN+ ++ +++  Y 
Sbjct: 67  RAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYA 126

Query: 122 RCGRLSEAVDCFYQ----------FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
             G   EA   F +          F LT+ L+       P L  C        IH    K
Sbjct: 127 LRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCC--------IHACACK 178

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           LG + + FV +SL+  Y   G  + AR +FD +  +D+ +W AM+S Y ++    +AL+ 
Sbjct: 179 LGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNT 238

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +MR+ G   +P  + S+L       + + G  IH   VK   +    V   L++MYAK
Sbjct: 239 FSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAK 298

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A  VF+ +   DV+ W+ +I+ Y QS     A   F  M ++ + P+  +L  +
Sbjct: 299 CGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGV 358

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
               A +      + +H  +++ G+  E + +GNA++D+YAK   + ++  +F  L   +
Sbjct: 359 LQACANVAFLDLGQQIHNLVIKLGYESE-LFVGNALMDVYAKCRNMENSLEIFRSLRDAN 417

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWNT+I GY Q+G A +A+ VFQ M   + ++  Q T+ S+L A ++  +++  ++IH
Sbjct: 418 EVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLS-TQVTFSSVLRACANTASIKHTVQIH 476

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           + + K+    D  V   L+D Y KCG I DA+ +F  + +   V WNAIIS + +HG+  
Sbjct: 477 SLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRAT 536

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
            AL  F +M     +P+ +TFV+LL+ C  +GLV++G   F+ M  +  IKP + HY C+
Sbjct: 537 DALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCI 596

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           V L GRAG L  A  FI ++P  P   +W ALL +C +H N+ LG  +++++ E++ ++ 
Sbjct: 597 VRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDE 656

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
             YVL+SN+YA  G  + V  +R   R+ G+KK  G S +E+  +V  F  G+  HP   
Sbjct: 657 TTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMR 716

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            I   L  L  K    GYVPD + VL DV+E+EK  +L  HSERLA+A+G+  +PP  PI
Sbjct: 717 IINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPI 776

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLR C DCH   K IS+I +REI+VRD NRFHHF +GICSCGDYW
Sbjct: 777 RIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 138/269 (51%), Gaps = 10/269 (3%)

Query: 360 DCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           D R  R+VH  +++RG   + D    N ++++YAKLG + +A  +F+G+P ++++S+ TL
Sbjct: 62  DARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTL 121

Query: 419 ITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           + GYA  G   EA  +F+ ++ E +E+  N     +IL     + A      IHA   K 
Sbjct: 122 VQGYALRGGFEEAAGLFRRLQREGHEV--NHFVLTTILKVLVAMDAPGLTCCIHACACKL 179

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               + FV + L+D Y  CG +  A  +F  +    +V W A++SC+  +   + ALN F
Sbjct: 180 GHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTF 239

Query: 538 RQMLDEGVRPDHITFVSLLTA--CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            +M   G +P+     S+L A  C  S ++ +G  +   ++     +PH+   G ++D++
Sbjct: 240 SKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGI-HGCAVKTLCDTEPHVG--GALLDMY 296

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            + G++  A    + +P   D  +W  L+
Sbjct: 297 AKCGYIEDARTVFEIIP-HDDVILWSFLI 324



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 13/183 (7%)

Query: 45  SREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101
           S ++ F  + ++C     + H  ++H+L+  S           L++ YA  G +  +   
Sbjct: 451 STQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKV 510

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F+ I   +V +WN++IS Y   GR ++A++ F +    S  +P+  TF  +L  C +   
Sbjct: 511 FESIIQCDVVSWNAIISGYALHGRATDALELFNRMN-KSDTKPNDVTFVALLSVCGS--T 567

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVRDSG-SWNA 214
           G       L      D  +  S+ H  C      R G  N A K   D+P   S   W A
Sbjct: 568 GLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRA 627

Query: 215 MIS 217
           ++S
Sbjct: 628 LLS 630


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/674 (38%), Positives = 390/674 (57%), Gaps = 8/674 (1%)

Query: 153 LKAC-----RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
           LK C     ++L   K+ HC +L+LG   D ++   LL     F     A  +F   P  
Sbjct: 5   LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHP 64

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS-GLLI 266
           +   +N +I G   +    +A+ +   MR  G + D  T   +L  C R  +    GL +
Sbjct: 65  NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H  ++K G ++++FV   L+ +Y+K G +  A +VFD++ E++VVSW +II  Y +S   
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A G F  + + G++PD  TLV +    +++ D  + R + G+ MR    + +V +  +
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGY-MRESGSVGNVFVATS 243

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           +VDMYAK G +  A  VF+G+  KDV+ W+ LI GYA NG+  EA++VF  M+  N + P
Sbjct: 244 LVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQREN-VRP 302

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           +    V +  A S +GAL  G      +  +    +  + T L+D Y KCG +  A  +F
Sbjct: 303 DCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVF 362

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             + R   V +NA+IS   + G    A   F QM+  G++PD  TFV LL  C+H+GLV 
Sbjct: 363 KGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVD 422

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G RYF  M   F + P ++HYGCMVDL  RAG L  A + I++MP+  ++ +WGALLG 
Sbjct: 423 DGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGG 482

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR+H + +L      +L E++  N G+YVL+SNIY+   +W+  +++RS    +G++K P
Sbjct: 483 CRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLP 542

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S +EV+  V  F  G+ +HP   KIY++L +L   ++  GY P   FVL DVEE+EKE
Sbjct: 543 GCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKE 602

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
           + L  HSE+LA+AF +IS+  K  I++ KNLRVCGDCH   K +S++T REIIVRD+NRF
Sbjct: 603 YFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRF 662

Query: 807 HHFKDGICSCGDYW 820
           HHF +G CSC DYW
Sbjct: 663 HHFTEGSCSCRDYW 676



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 157/515 (30%), Positives = 257/515 (49%), Gaps = 22/515 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           LH  K+ H LL+  G  +  +    L+    +     ++   F    + N++ +N++I  
Sbjct: 16  LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD----GKKIHCSVLKLGFE 175
            V      +AV   Y      G  PD +TFP VLKAC  L      G  +H  V+K GF+
Sbjct: 76  MVSNDAFRDAVS-VYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFD 134

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
           WDVFV   L+ +Y + G    ARK+FD++P ++  SW A+I GY +SG   EAL +   +
Sbjct: 135 WDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGL 194

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
              G+  D  T+  IL  C+R  ++ SG  I  Y+ + G   N+FV+ +L++MYAK G M
Sbjct: 195 LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSM 254

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             A RVFD M+E+DVV W+++I  Y  +  P  A   F  MQ+  ++PD   +V + S  
Sbjct: 255 EEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSAC 314

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           ++L          G +M    F+ + ++G A++D YAK G +  A  VF+G+  KD + +
Sbjct: 315 SRLGALELGNWARG-LMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVF 373

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N +I+G A  G    A  VF  M +   + P+  T+V +L   +H G +  G +  + + 
Sbjct: 374 NAVISGLAMCGHVGAAFGVFGQMVKVG-MQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMS 432

Query: 476 KNCLCFDVFVAT-------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
                  VF  T       C+VD+  + G + +A  L   +P  ++S+ W A++    +H
Sbjct: 433 S------VFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLH 486

Query: 528 GQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSH 561
                A +  +Q+++ E     H   +S + + SH
Sbjct: 487 KDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASH 521



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 201/429 (46%), Gaps = 33/429 (7%)

Query: 50  FDDLFQSCTKLHHV----KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F  + ++CT+L H       LH+L++ +G    VF  T LV  Y+  G L+ +R  FD I
Sbjct: 104 FPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEI 163

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDG 162
             +NV +W ++I  Y+  G   EA+  F    L  GLRPD +T   +L AC    +L  G
Sbjct: 164 PEKNVVSWTAIICGYIESGCFGEALGLFRGL-LEMGLRPDSFTLVRILYACSRVGDLASG 222

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           + I   + + G   +VFVA SL+ MY + G    AR++FD M  +D   W+A+I GY  +
Sbjct: 223 RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASN 282

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCAR-----SDNILSGLLIHLYIVKHGLEF 277
           G   EALD+  EM+ E V  D   +  +   C+R       N   GL+        G EF
Sbjct: 283 GMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLM-------DGDEF 335

Query: 278 --NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             N  +   LI+ YAK G +  A  VF  M  +D V +N++I+          A G F  
Sbjct: 336 LSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQ 395

Query: 336 MQQAGIQPDLLTLVSL---TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           M + G+QPD  T V L    +    ++D     S    +      +E       +VD+ A
Sbjct: 396 MVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHY---GCMVDLQA 452

Query: 393 KLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGT 450
           + G++  A  +   +P++ + I W  L+ G     L  +      ++++  E+ P N G 
Sbjct: 453 RAGLLVEAQDLIRSMPMEANSIVWGALLGGCR---LHKDTQLAEHVLKQLIELEPWNSGH 509

Query: 451 YVSILPAYS 459
           YV +   YS
Sbjct: 510 YVLLSNIYS 518


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/705 (37%), Positives = 398/705 (56%), Gaps = 37/705 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 209
           ++  C +L   K+ H  +++ G   D + A+ L  +      A++  ARK+FD++P  +S
Sbjct: 37  LIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNS 96

Query: 210 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIH 267
            +WN +I  Y    + V ++   LD +  E     +  T   ++   A   ++  G  +H
Sbjct: 97  FTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 156

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
              +K  +  ++FV+N+LI+ Y   G +  A +VF  + E+DVVSWNS+I  + Q   P 
Sbjct: 157 GMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 216

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  M+   ++   +T+V + S  A++ D    R V  +I        ++ + NA+
Sbjct: 217 KALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYI-EENRVNVNLTLANAM 275

Query: 388 VDMYAKLGIINSACAVFEGL-------------------------------PVKDVISWN 416
           +DMY K G I  A  +F+ +                               P KD+++WN
Sbjct: 276 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWN 335

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            LI+ Y QNG  +EA+ VF  ++    I  NQ T VS L A + VGAL  G  IH+ + K
Sbjct: 336 ALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKK 395

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
           N +  + +V + L+ MY KCG ++ A  +F  V +     W+A+I    +HG G +A++ 
Sbjct: 396 NGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDM 455

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F +M +  V+P+ +TF ++  ACSH+GLV E +  F+ M+  +GI P  KHY C+VD+ G
Sbjct: 456 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLG 515

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           R+G+L  A  FI+ MP+ P  S+WGALLGAC+IH N+ L  +A  RL E++  N G +VL
Sbjct: 516 RSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVL 575

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  GKW+ V E+R   R  GLKK PG SSIE++  +  F +G+  HP  EK+Y +
Sbjct: 576 LSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 635

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
           L  +  K+KS GY P+ S VLQ +EE+E KE  L  HSE+LAI +G+IS+     I++ K
Sbjct: 636 LHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIK 695

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLR+CGDCH   K ISQ+  REIIVRD  RFHHF++G CSC D+W
Sbjct: 696 NLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 177/629 (28%), Positives = 299/629 (47%), Gaps = 67/629 (10%)

Query: 43  NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRH 100
           N  R      L   C+ L  +K+ HA ++ +G     +S++KL    A  +   L ++R 
Sbjct: 27  NNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARK 86

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKAC--- 156
            FD I   N +TWN++I  Y        ++  F     + S   P+ YTFP ++KA    
Sbjct: 87  VFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEV 146

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
            +L  G+ +H   +K     DVFVA SL+H Y   G  + A K+F  +  +D  SWN+MI
Sbjct: 147 SSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 206

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +G+ Q G+  +AL++  +M  E V    +T+  +L  CA+  ++  G  +  YI ++ + 
Sbjct: 207 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVN 266

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMME----------------------------- 307
            NL ++N +++MY K G +  A R+FD M E                             
Sbjct: 267 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAM 326

Query: 308 --RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNS 364
             +D+V+WN++I+AYEQ+  P  A   F  +Q Q  I+ + +TLVS  S  AQ+      
Sbjct: 327 PKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELG 386

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +H +I + G  M +  + +A++ MY+K G +  A  VF  +  +DV  W+ +I G A 
Sbjct: 387 RWIHSYIKKNGIKM-NFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAM 445

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN--CLCFD 482
           +G  SEA+++F  M+E N + PN  T+ ++  A SH G + +   +  ++  +   +  D
Sbjct: 446 HGCGSEAVDMFYKMQEAN-VKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPED 504

Query: 483 VFVATCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
              A C+VD+ G+ G ++ A+       +P S+SV W A++    IH     A     ++
Sbjct: 505 KHYA-CIVDVLGRSGYLEKAVKFIEAMPIPPSTSV-WGALLGACKIHANLSLAEMACTRL 562

Query: 541 LDEGVRPD--HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM---VDLF 595
           L+   R D  H+   ++         VSE +++  +     G+K   K  GC    +D  
Sbjct: 563 LELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVT----GLK---KEPGCSSIEID-- 613

Query: 596 GRAGHLGMAHNFIQNMPVRP-DASIWGAL 623
                 GM H F+      P    ++G L
Sbjct: 614 ------GMIHEFLSGDNAHPMSEKVYGKL 636


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 274/701 (39%), Positives = 394/701 (56%), Gaps = 38/701 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH---MYCRFGLANVARKLFDDMPVRD 208
           +L  C+ L   + IH  ++K G     +  + L+    +   F     A  +FD +   +
Sbjct: 8   LLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPN 67

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN M  G+  S + V AL +   M   G+  +  T   +L  CA+S     G  IH 
Sbjct: 68  LLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHG 127

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS---------------- 312
           +++K G + +L+V  +LI MY K G    A +VFDQ   RDVVS                
Sbjct: 128 HVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXS 187

Query: 313 ---------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
                          WN++I+ Y ++ +   A   F  M +  ++PD  T+V++ S  AQ
Sbjct: 188 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQ 247

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                  R VH +I   G F  ++ I NA++D+Y K G + +A  +FEGL  KDVISWNT
Sbjct: 248 SASIELGRQVHSWIDDHG-FGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNT 306

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           LI GY    L  EA+ +FQ M    E +PN+ T +SILPA +H+GA+  G  IH  + K 
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGE-SPNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365

Query: 478 C--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
              +     + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A +
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFD 425

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M  +G+ PD ITFV LL+ACSHSG++  G+  F  M E++ I P L+HYGCM+DL 
Sbjct: 426 IFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLL 485

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           G +G    A   I +M + PD  IW +LL AC++HGN+ELG   +  L +++ +N G YV
Sbjct: 486 GHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYV 545

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SNIYA  G+W  V + R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY 
Sbjct: 546 LLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYG 605

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
            L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I K
Sbjct: 606 MLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 665

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           NLRVC +CH  TK IS+I +REII RD  RFHHF DG+CSC
Sbjct: 666 NLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 269/531 (50%), Gaps = 46/531 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA---NLGDLSFSRHTFDHISYRN 109
           L  +C  L  ++ +HA ++ +G   T ++ +KL+ F     +   L+++   FD I   N
Sbjct: 8   LLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPN 67

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKAC---RNLVDGKK 164
           +  WN+M   +      S+ V   Y +   ++ GL P+ YTFP +LKAC   +   +G++
Sbjct: 68  LLIWNTMFRGHALS---SDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR-------------------------- 198
           IH  VLKLG + D++V  SL+ MY + G    AR                          
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184

Query: 199 -----KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
                K+FD++PV+D  SWNA+ISGY ++GN  EAL++  EM    V  D  T+ ++L  
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           CA+S +I  G  +H +I  HG   NL + N LI++Y K G +  A  +F+ +  +DV+SW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N++I  Y   N    A   F  M ++G  P+ +T++S+    A L      R +H +I +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364

Query: 374 RGWFMED-VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           R   + +   +  +++DMYAK G I +A  VF+ +  + + SWN +I G+A +G A+ A 
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAF 424

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVD 491
           ++F  M + + I P+  T+V +L A SH G L  G  I   + ++  +   +    C++D
Sbjct: 425 DIFSRMRK-DGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMID 483

Query: 492 MYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHGQGDKALNFFRQML 541
           + G  G   +A  +   +      V W +++    +HG  +   +F + ++
Sbjct: 484 LLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLI 534



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 187/393 (47%), Gaps = 11/393 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G +  ++  FD I  ++V +WN++IS Y   G   EA++ F + 
Sbjct: 167 RDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEM 226

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + ++PD  T   VL AC        G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 227 -MKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 285

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +  +D  SWN +I GY       EAL +  EM   G S + +T+ SILP 
Sbjct: 286 VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPA 345

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VFD M+ R + 
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        A   F+ M++ GI+PD +T V L S  +        R +   +
Sbjct: 406 SWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
                    +     ++D+    G+   A  +   + +  D + W +L+     +G   E
Sbjct: 466 TEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG-NVE 524

Query: 431 AIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
             E F   +   +I P N G+YV +   Y+  G
Sbjct: 525 LGESFA--QNLIKIEPKNSGSYVLLSNIYATAG 555


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/663 (39%), Positives = 372/663 (56%), Gaps = 40/663 (6%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           + +H  ++      +  +   L+  Y        ARK+FD++P R+    N MI  Y  +
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G   E + +   M    V  D  T   +L  C+ S  I+ G  IH    K GL   LFV 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++MY K G +  A  V D+M  RDVVSWNS++  Y Q+     A      M+   I 
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D  T+ SL   V+                      E+V+    V DM+ K+G       
Sbjct: 239 HDAGTMASLLPAVSNTT------------------TENVMY---VKDMFFKMG------- 270

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
                  K ++SWN +I  Y +N +  EA+E++  ME  +   P+  +  S+LPA     
Sbjct: 271 ------KKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSITSVLPACGDTS 323

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G KIH  + +  L  ++ +   L+DMY KCG ++ A  +F  +     V W A+IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G  G+G  A+  F ++ D G+ PD I FV+ L ACSH+GL+ EG+  F +M + + I 
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P L+H  CMVDL GRAG +  A+ FIQ+M + P+  +WGALLGACR+H + ++G +A+D+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LF++  E  GYYVL+SNIYA  G+WE V  +R++ + +GLKK PG S++EVN  +  F  
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+R+HP+ ++IY EL  L  KMK LGYVPD    L DVEE++KE  L  HSE+LAI F +
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFAL 623

Query: 763 ISSPPK-----SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +++  +     + I+I KNLR+CGDCH   K ISQIT REII+RD+NRFH F+ G+CSCG
Sbjct: 624 MNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCG 683

Query: 818 DYW 820
           DYW
Sbjct: 684 DYW 686



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 229/464 (49%), Gaps = 57/464 (12%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL+  YA+L D++ +R  FD I  RNV   N MI  YV  G   E V  F        +R
Sbjct: 79  KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVR 137

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YTFP VLKAC     +V G+KIH S  K+G    +FV   L+ MY + G  + AR +
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            D+M  RD  SWN+++ GY Q+    +AL++  EM    +S D  T+AS+LP  + +   
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--- 254

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                                + N+  MY K         +F +M ++ +VSWN +I  Y
Sbjct: 255 --------------------TTENV--MYVK--------DMFFKMGKKSLVSWNVMIGVY 284

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            ++  P+ A   ++ M+  G +PD +++ S+       +     + +HG+I R+   + +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK-LIPN 343

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +++ NA++DMYAK G +  A  VFE +  +DV+SW  +I+ Y  +G   +A+ +F  +++
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVAT-------CLVD 491
              + P+   +V+ L A SH G L +G        ++C  L  D +  T       C+VD
Sbjct: 404 SGLV-PDSIAFVTTLAACSHAGLLEEG--------RSCFKLMTDHYKITPRLEHLACMVD 454

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
           + G+ G++ +A      +    +   W A++    +H   D  L
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/696 (38%), Positives = 397/696 (57%), Gaps = 49/696 (7%)

Query: 136 FTLTSG---LRPDFYTFPPVLKACRNLVDG-------KKIHCSVL-KLGFEWDVFVAASL 184
           F+LT+    L P F      L  C  ++D        KK+H  +L       +  +   L
Sbjct: 20  FSLTTQKPQLSPKFTALTEDL--CNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKL 77

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           +  Y   G     R +FD++  ++   +N MI  Y  +G   +AL +   M  +G   D 
Sbjct: 78  MRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDN 137

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
            T   +L  C+ S N+  GL IH  +VK GL+ NL++ N L++MY K   +  A RV D+
Sbjct: 138 YTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDE 197

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M  RD+VSWNS++A Y Q+     A      M+   ++PD  T+ SL   V     C N 
Sbjct: 198 MPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN-TSCDNV 256

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
             V                     DM+ K             L  K +ISWN +I  Y  
Sbjct: 257 LYVK--------------------DMFVK-------------LKEKSLISWNVMIAVYVN 283

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           N + +EA++++  M + + + P+  +  S+LPA   + A   G +IH  V +  L  ++ 
Sbjct: 284 NAMPNEAVDLYLQM-QVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLL 342

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           +   L+DMY KCG + +A ++F Q+     V W ++IS +G+ GQG  A+  F++M D G
Sbjct: 343 LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
             PD I FVS+L ACSH+GLV EG+  F++M  E+GI P ++HY CMVDL GRAG +  A
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEA 461

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
           ++  + MP+ P+  +WG+LL ACR++ +M +  +A+D LF++  E  GYYVL+SNIYA  
Sbjct: 462 YHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKA 521

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G+W+ V+ VRS+   +G+KK PG S++E+N+ V  F  G+++H + ++IY  L  L  +M
Sbjct: 522 GRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRM 581

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           K LGY+P+    L DVEE++KE  L  HSE+LAI F I+++ P S I+I KN+RVCGDCH
Sbjct: 582 KELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCH 641

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             TK IS+I EREII+RD++RFHHF+DG+CSCGDYW
Sbjct: 642 VATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 246/479 (51%), Gaps = 45/479 (9%)

Query: 63  VKRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           +K+LH+ +++   +    S   KL+  YA  G+  ++RH FD I+ +NV  +N MI  YV
Sbjct: 54  LKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYV 113

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDV 178
             G   +A+  F       G  PD YT+P VLKAC    NL  G +IH +V+KLG + ++
Sbjct: 114 NNGLYQDALLVFKTMA-NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNL 172

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           ++   L+ MY +    + AR++ D+MP RD  SWN+M++GY Q+G   +AL +  EM   
Sbjct: 173 YIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDL 232

Query: 239 GVSMDPITVASILPVCARS--DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            +  D  T+ S+LP    +  DN+L                           Y K     
Sbjct: 233 KLKPDAGTMGSLLPAVTNTSCDNVL---------------------------YVK----- 260

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
               +F ++ E+ ++SWN +IA Y  +  P  A   +  MQ  G++PD +++ S+     
Sbjct: 261 ---DMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACG 317

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L+     R +H ++ R+     ++++ NA++DMYAK G +  A AVF+ +  +DV+SW 
Sbjct: 318 DLSAAVLGRRIHEYVERKK-LRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           ++I+ Y  +G   +A+ +F+ M +     P+   +VS+L A SH G + +G      + +
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSG-FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE 435

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
             +   +    C+VD+ G+ G+ID+A  L  Q+P   +   W +++S   ++   + AL
Sbjct: 436 YGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIAL 494


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 270/721 (37%), Positives = 409/721 (56%), Gaps = 52/721 (7%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           + Y  N  I +Y +CGRL+ A   F   +      P+ ++F  ++ A             
Sbjct: 42  STYFSNHFILLYSKCGRLAWARKAFQDIS-----DPNVFSFNAIIAA------------- 83

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
                              Y +     +A +LFD +P  D  S+N +IS Y   G    A
Sbjct: 84  -------------------YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +   MR  G+ MD  T+++++  C     ++  L  H   V  G +  + V+N L+  
Sbjct: 125 LGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQL--HSVAVSSGFDSYVSVNNALLTY 182

Query: 289 YAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           Y K G +  A RVF  M   RD VSWNS+I AY Q  +   A G F  M + G+  D+ T
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFT 242

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC-AVFEG 406
           L S+ +    L D       HG +++ G F ++  +G+ ++D+Y+K G   S C  VFE 
Sbjct: 243 LASVLTAFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301

Query: 407 LPVKDVISWNTLITGYAQNG-LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +   D++ WNT+++GY+QN     +A+E F+ M+      PN  ++V ++ A S++ +  
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG-YRPNDCSFVCVISACSNLSSPS 360

Query: 466 QGIKIHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           QG +IH+  +K+ +  + + V   L+ MY KCG + DA  LF ++   ++V  N++I+ +
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             HG   ++L+ F+ ML+  + P  ITF+S+L+AC+H+G V EG  YF+MM+E+F I+P 
Sbjct: 421 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPE 480

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
            +HY CM+DL GRAG L  A N I  MP  P +  W +LLGACR HGN+EL   A++++ 
Sbjct: 481 AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           +++  N   YV++SN+YA+ G+WE V  VR   RDRG+KK PG S IEV  ++ +F   +
Sbjct: 541 QLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED 600

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED-----EKEHILTSHSERLAIA 759
            +HP  ++IY+ L  ++ KMK  GYVPD  + L  V++D     EKE  L  HSE+LA+A
Sbjct: 601 SSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVA 658

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG+IS+    P+ + KNLR+CGDCHN  KFIS I  REI VRD++RFH FK+G CSCGDY
Sbjct: 659 FGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDY 718

Query: 820 W 820
           W
Sbjct: 719 W 719



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 243/470 (51%), Gaps = 10/470 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           VFS   ++  YA       +   FD I   ++ ++N++IS Y  CG  + A+  F     
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR- 132

Query: 139 TSGLRPDFYTFPPVLKACRNLVDG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
             GL  D +T   V+ AC + V    ++H   +  GF+  V V  +LL  Y + G  + A
Sbjct: 133 EMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192

Query: 198 RKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           +++F  M  +RD  SWN+MI  Y Q     +AL +  EM   G+++D  T+AS+L     
Sbjct: 193 KRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC 252

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF-GMMRHALRVFDQMMERDVVSWNS 315
            +++  GL  H  ++K G   N  V + LI++Y+K  G M    +VF+++ E D+V WN+
Sbjct: 253 LEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNT 312

Query: 316 IIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +++ Y Q+ + +  A   F  MQ  G +P+  + V + S  + L+     + +H   ++ 
Sbjct: 313 MVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKS 372

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                 + + NA++ MY+K G +  A  +F+ +   + +S N++I GYAQ+G+  E++ +
Sbjct: 373 DIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHL 432

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDM 492
           FQ M E  +I P   T++S+L A +H G + +G   +  ++K     +      +C++D+
Sbjct: 433 FQWMLE-RQIAPTSITFISVLSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            G+ G++ +A +L  ++P    S+ W +++     HG  + A+    Q+L
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 197/416 (47%), Gaps = 39/416 (9%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  C    ++ +G  +H   +K  +  + + SN+ I +Y+K G +  A + F  + + +
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 310 VVSWNSIIAAYEQSNDPITAH-------------------------------GFFTTMQQ 338
           V S+N+IIAAY + + P+ AH                               G F+ M++
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G+  D  TL ++  I A  +D      +H   +  G F   V + NA++  Y K G ++
Sbjct: 134 MGLDMDXFTLSAV--ITACCDDVGLIGQLHSVAVSSG-FDSYVSVNNALLTYYGKNGDLD 190

Query: 399 SACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
            A  VF G+  ++D +SWN++I  Y Q+   S+A+ +FQ M     +N +  T  S+L A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR-RGLNVDMFTLASVLTA 249

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC-GRIDDAMSLFYQVPRSSSVP 516
           ++ +  L  G++ H ++IK     +  V + L+D+Y KC G + D   +F ++     V 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 517 WNAIISCHGIHGQG-DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           WN ++S +  + +  + AL  FRQM   G RP+  +FV +++ACS+    S+G++   + 
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +       +     ++ ++ + G+L  A      M      S+   + G  + HG
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQ-HG 424



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 213/464 (45%), Gaps = 24/464 (5%)

Query: 18  PLLQAHRPLFSAAANSLQISPDC-LENESREIDFD-DLFQ-------SCTKLHHVKRLHA 68
           P L ++  L SA A+  + +P   L +  RE+  D D F         C  +  + +LH+
Sbjct: 103 PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHS 162

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLS 127
           + V SG    V  +  L+ +Y   GDL  ++  F  +   R+  +WNSMI  Y +    S
Sbjct: 163 VAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
           +A+  F Q  +  GL  D +T   VL A     +L  G + H  ++K GF  +  V + L
Sbjct: 223 KALGLF-QEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGL 281

Query: 185 LHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEMRLEGVS 241
           + +Y  C  G+++  RK+F+++   D   WN M+SGY Q+   +E AL+   +M+  G  
Sbjct: 282 IDLYSKCGGGMSD-CRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYR 340

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLINMYAKFGMMRHALR 300
            +  +   ++  C+   +   G  IH   +K  +  N + V N LI MY+K G ++ A R
Sbjct: 341 PNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD+M E + VS NS+IA Y Q    + +   F  M +  I P  +T +S+ S  A    
Sbjct: 401 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 460

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
                +    +  +     +    + ++D+  + G ++ A  +   +P     I W +L+
Sbjct: 461 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 520

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
                +G    A++      +  ++ P N   YV +   Y+  G
Sbjct: 521 GACRTHGNIELAVKA---ANQVLQLEPSNAAPYVVLSNMYASAG 561


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/765 (36%), Positives = 417/765 (54%), Gaps = 17/765 (2%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYV 121
             ++ H  +  SG ++ V     +++ YA  G  S +   F  I ++ +V +WN+M+    
Sbjct: 354  ARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASE 413

Query: 122  RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW-D 177
                  + V+ F+   L +G+ P+  +F  +L AC N   L  G+KIH  +L    ++ +
Sbjct: 414  DRKSFGKVVNTFHHMLL-AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 178  VFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEM 235
              VA  L+ MY + G    A  +F +MP+  R   +WN M+  Y Q+  + EA   L EM
Sbjct: 473  SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 236  RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
               GV  D ++  S+L  C  S       ++ + I++ G   +  +   LI+M+ +   +
Sbjct: 533  LQGGVLPDALSFTSVLSSCYCSQE---AQVLRMCILESGYR-SACLETALISMHGRCREL 588

Query: 296  RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
              A  VFD+M   DVVSW ++++A  ++ D    H  F  MQ  G+ PD  TL +     
Sbjct: 589  EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 356  AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
                     + +H  +   G    D+ + NA+++MY+  G    A + FE +  +D++SW
Sbjct: 649  LDSTTLGLGKIIHACVTEIG-LEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSW 707

Query: 416  NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            N +   YAQ GLA EA+ +F+ M+    + P++ T+ + L        +  G   H    
Sbjct: 708  NIMSAAYAQAGLAKEAVLLFRHMQ-LEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAA 766

Query: 476  KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
            ++ L  DV VAT LV +Y KCG++D+A+SLF    + + V  NAII     HG  ++A+ 
Sbjct: 767  ESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVK 826

Query: 536  FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
             F +M  EGVRPD  T VS+++AC H+G+V EG   F  M+E FGI P L+HY C VDL 
Sbjct: 827  MFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLL 886

Query: 596  GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
            GRAG L  A   I+ MP   +  +W +LLG C++ G+ ELG   + R+ E+D  N   +V
Sbjct: 887  GRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHV 946

Query: 656  LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
            ++SNIY   GKW+  D  R    D+ +K  PG S +E+  +V  F  G+R+HP+ ++IY 
Sbjct: 947  VLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYV 1006

Query: 716  ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
             L  L   M+  GY  DK     D E++ KE  L  HSER+AIAFG+I++PP + ++I K
Sbjct: 1007 VLDKLELLMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVK 1063

Query: 776  NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            NLRVCGDCH  TK+IS I  REIIVRDS RFHHF +G CSC D W
Sbjct: 1064 NLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 184/597 (30%), Positives = 292/597 (48%), Gaps = 30/597 (5%)

Query: 49  DFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           ++  L QSC     L   KR H L+  +G  + +F    L+N Y   G L  +   F  +
Sbjct: 27  EYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKM 86

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             RNV +W ++IS   + G  + A   F    L S   P+ YT   +L AC   R+L  G
Sbjct: 87  EERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIG 146

Query: 163 KKIHCSVLKLGFEWD----VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           + IH  + +LG E +      V  ++++MY + G    A  +F  +P +D  SW AM   
Sbjct: 147 RSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGA 206

Query: 219 YCQSGNAV-EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           Y Q      +AL I  EM L+ ++ + IT  + L  C    ++  G  +H  + + GL F
Sbjct: 207 YAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEAGLGF 263

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMER---DVVSWNSIIAAYEQSNDPITAHGFFT 334
           +    N LINMY K G    A  VF  M  R   D+VSWN++I+A  ++     A   F 
Sbjct: 264 DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 335 TMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
            ++  G++P+ +TL++ L ++ A   D   +R  HG I   G ++ DV++GNA++ MYAK
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESG-YLRDVVVGNAIISMYAK 382

Query: 394 LGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
            G  ++A  VF  +  K DVISWNT++          + +  F  M     I+PN+ +++
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG-IDPNKVSFI 441

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQ--V 509
           +IL A S+  AL  G KIH+ ++     + +  VAT LV MYGKCG I +A  +F +  +
Sbjct: 442 AILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPL 501

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
           P  S V WN ++  +  + +  +A     +ML  GV PD ++F S+L++C      S+  
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC----YCSQEA 557

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +   M   E G +        ++ + GR   L  A +    M    D   W A++ A
Sbjct: 558 QVLRMCILESGYRSACLETA-LISMHGRCRELEQARSVFDEMD-HGDVVSWTAMVSA 612



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 281/598 (46%), Gaps = 20/598 (3%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY 107
           I F     +CT L     LH+LL  +G      +   L+N Y   GD   +   F  ++ 
Sbjct: 234 ITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMAS 293

Query: 108 R---NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRNLVD-- 161
           R   ++ +WN+MIS  V  GR  +A+  F +  L  G+RP+  T   +L A   + VD  
Sbjct: 294 RQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL-EGMRPNSVTLITILNALAASGVDFG 352

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGY 219
             +K H  + + G+  DV V  +++ MY + G  + A  +F  +  + D  SWN M+   
Sbjct: 353 AARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGAS 412

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-N 278
               +  + ++    M L G+  + ++  +IL  C+ S+ +  G  IH  I+    ++  
Sbjct: 413 EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             V+  L++MY K G +  A  VF +M    R +V+WN ++ AY Q++    A G    M
Sbjct: 473 SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            Q G+ PD L   S TS+++     + ++ +   I+  G+      +  A++ M+ +   
Sbjct: 533 LQGGVLPDAL---SFTSVLSSCYCSQEAQVLRMCILESGY--RSACLETALISMHGRCRE 587

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A +VF+ +   DV+SW  +++  A+N    E   +F+ M +   + P++ T  + L 
Sbjct: 588 LEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRM-QLEGVIPDKFTLATTLD 646

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
                  L  G  IHA V +  L  D+ V   L++MY  CG   +A+S F  +     V 
Sbjct: 647 TCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVS 706

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN + + +   G   +A+  FR M  EGV+PD +TF + L     S LVS+G + FH + 
Sbjct: 707 WNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLA 765

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            E G+   +     +V L+ + G L  A +  +    +    +  A++GA   HG  E
Sbjct: 766 AESGLDSDVSVATGLVKLYAKCGKLDEAISLFRG-ACQWTVVLLNAIIGALAQHGFSE 822


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 270/721 (37%), Positives = 409/721 (56%), Gaps = 52/721 (7%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           + Y  N  I +Y +CGRL+ A   F   +      P+ ++F  ++ A             
Sbjct: 42  STYFSNHFILLYSKCGRLAWARKAFQDIS-----DPNVFSFNAIIAA------------- 83

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
                              Y +     +A +LFD +P  D  S+N +IS Y   G    A
Sbjct: 84  -------------------YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPA 124

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +   MR  G+ MD  T+++++  C     ++  L  H   V  G +  + V+N L+  
Sbjct: 125 LGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQL--HSVAVSSGFDSYVSVNNALLTY 182

Query: 289 YAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           Y K G +  A RVF  M   RD VSWNS+I AY Q  +   A G F  M + G+  D+ T
Sbjct: 183 YGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFT 242

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC-AVFEG 406
           L S+ +    L D       HG +++ G F ++  +G+ ++D+Y+K G   S C  VFE 
Sbjct: 243 LASVLTAFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301

Query: 407 LPVKDVISWNTLITGYAQNG-LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +   D++ WNT+++GY+QN     +A+E F+ M+      PN  ++V ++ A S++ +  
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG-YRPNDCSFVCVISACSNLSSPS 360

Query: 466 QGIKIHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           QG +IH+  +K+ +  + + V   L+ MY KCG + DA  LF ++   ++V  N++I+ +
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             HG   ++L+ F+ ML+  + P  ITF+S+L+AC+H+G V EG  YF+MM+E+F I+P 
Sbjct: 421 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPE 480

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
            +HY CM+DL GRAG L  A N I  MP  P +  W +LLGACR HGN+EL   A++++ 
Sbjct: 481 AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           +++  N   YV++SN+YA+ G+WE V  VR   RDRG+KK PG S IEV  ++ +F   +
Sbjct: 541 QLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAED 600

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED-----EKEHILTSHSERLAIA 759
            +HP  ++IY+ L  ++ KMK  GYVPD  + L  V++D     EKE  L  HSE+LA+A
Sbjct: 601 SSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVA 658

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG+IS+    P+ + KNLR+CGDCHN  KFIS I  REI VRD++RFH FK+G CSCGDY
Sbjct: 659 FGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDY 718

Query: 820 W 820
           W
Sbjct: 719 W 719



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 243/470 (51%), Gaps = 10/470 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           VFS   ++  YA       +   FD I   ++ ++N++IS Y  CG  + A+  F     
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR- 132

Query: 139 TSGLRPDFYTFPPVLKACRNLVDG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
             GL  D +T   V+ AC + V    ++H   +  GF+  V V  +LL  Y + G  + A
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192

Query: 198 RKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           +++F  M  +RD  SWN+MI  Y Q     +AL +  EM   G+++D  T+AS+L     
Sbjct: 193 KRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTC 252

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF-GMMRHALRVFDQMMERDVVSWNS 315
            +++  GL  H  ++K G   N  V + LI++Y+K  G M    +VF+++ E D+V WN+
Sbjct: 253 LEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNT 312

Query: 316 IIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +++ Y Q+ + +  A   F  MQ  G +P+  + V + S  + L+     + +H   ++ 
Sbjct: 313 MVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKS 372

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                 + + NA++ MY+K G +  A  +F+ +   + +S N++I GYAQ+G+  E++ +
Sbjct: 373 DIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHL 432

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDM 492
           FQ M E  +I P   T++S+L A +H G + +G   +  ++K     +      +C++D+
Sbjct: 433 FQWMLE-RQIAPTSITFISVLSACAHTGRVEEGWN-YFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            G+ G++ +A +L  ++P    S+ W +++     HG  + A+    Q+L
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 197/416 (47%), Gaps = 39/416 (9%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  C    ++ +G  +H   +K  +  + + SN+ I +Y+K G +  A + F  + + +
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 310 VVSWNSIIAAYEQSNDPITAH-------------------------------GFFTTMQQ 338
           V S+N+IIAAY + + P+ AH                               G F+ M++
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G+  D  TL ++  I A  +D      +H   +  G F   V + NA++  Y K G ++
Sbjct: 134 MGLDMDGFTLSAV--ITACCDDVGLIGQLHSVAVSSG-FDSYVSVNNALLTYYGKNGDLD 190

Query: 399 SACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
            A  VF G+  ++D +SWN++I  Y Q+   S+A+ +FQ M     +N +  T  S+L A
Sbjct: 191 DAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVR-RGLNVDMFTLASVLTA 249

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC-GRIDDAMSLFYQVPRSSSVP 516
           ++ +  L  G++ H ++IK     +  V + L+D+Y KC G + D   +F ++     V 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 517 WNAIISCHGIHGQG-DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           WN ++S +  + +  + AL  FRQM   G RP+  +FV +++ACS+    S+G++   + 
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +       +     ++ ++ + G+L  A      M      S+   + G  + HG
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQ-HG 424



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 213/464 (45%), Gaps = 24/464 (5%)

Query: 18  PLLQAHRPLFSAAANSLQISPDC-LENESREIDFD-DLFQ-------SCTKLHHVKRLHA 68
           P L ++  L SA A+  + +P   L +  RE+  D D F         C  +  + +LH+
Sbjct: 103 PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHS 162

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLS 127
           + V SG    V  +  L+ +Y   GDL  ++  F  +   R+  +WNSMI  Y +    S
Sbjct: 163 VAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
           +A+  F Q  +  GL  D +T   VL A     +L  G + H  ++K GF  +  V + L
Sbjct: 223 KALGLF-QEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGL 281

Query: 185 LHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEMRLEGVS 241
           + +Y  C  G+++  RK+F+++   D   WN M+SGY Q+   +E AL+   +M+  G  
Sbjct: 282 IDLYSKCGGGMSD-CRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYR 340

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLINMYAKFGMMRHALR 300
            +  +   ++  C+   +   G  IH   +K  +  N + V N LI MY+K G ++ A R
Sbjct: 341 PNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARR 400

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD+M E + VS NS+IA Y Q    + +   F  M +  I P  +T +S+ S  A    
Sbjct: 401 LFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGR 460

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
                +    +  +     +    + ++D+  + G ++ A  +   +P     I W +L+
Sbjct: 461 VEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL 520

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
                +G    A++      +  ++ P N   YV +   Y+  G
Sbjct: 521 GACRTHGNIELAVKA---ANQVLQLEPSNAAPYVVLSNMYASAG 561


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/654 (39%), Positives = 393/654 (60%), Gaps = 12/654 (1%)

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           E +VF   +L+  Y +  L +VA  LFD +P  D  S+N +I+ Y   G+ + AL +  E
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           MR  G+ MD  T + ++  C     ++  L  H      G +  + V N+L+  Y+K G+
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLIRQL--HSLAFSSGFDSYVSVKNSLLTYYSKNGI 188

Query: 295 MRHALRVFDQMME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           +  A  VF+ M E  RD VSWNS+I AY Q    + A   +  M   G + D+ TL S+ 
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI-INSACAVFEGLPVKD 411
           +  + + D       H   ++ G F ++  +G+ ++DMYAK G  ++ +  VFE +   D
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTG-FNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307

Query: 412 VISWNTLITGYAQNG-LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           ++ WNT+I+GY+QN  L+ EA+E F+ M+      P+  ++V  + A S++ +  QG + 
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYW-PDDCSFVCAISACSNLSSPSQGKQF 366

Query: 471 HARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           HA  +K+ +  + + V   LV MY KCG + DA  LF ++P+ ++V  N+II+ +  HG 
Sbjct: 367 HALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGI 426

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G ++LN F QML   + P  IT VS+L+AC+H+G V EG++YF+MM++ FGI+P  +HY 
Sbjct: 427 GTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYS 486

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CM+DL GRAG L  A   I  MP  P ++ W ALLGACR +GNMEL   A+++  +++  
Sbjct: 487 CMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPT 546

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           N   Y++++++Y+   KWE    +R L RDRG++K PG S IE+N +V +F   + +HP+
Sbjct: 547 NAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPR 606

Query: 710 YEKIYDELRNLTAKMKSLGYVPDK--SFVLQD-VEEDEKEHILTSHSERLAIAFGIISSP 766
            ++I+  L  +  KMK  GYVPD   +FV  D   E EKE +L  HSE+LA+AFG++ + 
Sbjct: 607 IKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTK 666

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              P+ + KNLR+CGDCHN  KF+S I  R+I VRD+ RFH F+DG CSCGDYW
Sbjct: 667 HGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 266/553 (48%), Gaps = 47/553 (8%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC     L   K LH + + S    + + S   +  Y+    L+ + H F+   
Sbjct: 11  FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQF--------------------TLTS------ 140
             NV+++N++I+ Y +   +  A   F Q                     TL++      
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130

Query: 141 ----GLRPDFYTFPPVLKACRNLVDG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
               GL  D +TF  V+ AC N V   +++H      GF+  V V  SLL  Y + G+  
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILE 190

Query: 196 VARKLFDDM--PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            A  +F+ M   VRD  SWN+MI  Y Q    ++AL +  +M   G  +D  T+AS+L  
Sbjct: 191 EAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTT 250

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM-MRHALRVFDQMMERDVVS 312
            +  +++  GL  H   +K G   N  V + LI+MYAK G  M  + +VF+++   D+V 
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310

Query: 313 WNSIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           WN++I+ Y Q+ +  + A   F  MQ+AG  PD  + V   S  + L+     +  H   
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           M+       + + NA+V MY+K G +  A  +F+ +P  + ++ N++I GYAQ+G+ +E+
Sbjct: 371 MKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTES 430

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCL 489
           + +F+ M   + I P   T VSIL A +H G + +G K +  ++K+    +      +C+
Sbjct: 431 LNLFEQMLAAS-IAPTSITLVSILSACAHTGRVEEG-KKYFNMMKDIFGIEPEAEHYSCM 488

Query: 490 VDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGV 545
           +D+ G+ G++ +A  L   +P S  S  W A++     +G     +KA N F Q+     
Sbjct: 489 IDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNA 548

Query: 546 RPDHITFVSLLTA 558
            P +I   S+ +A
Sbjct: 549 VP-YIMLASMYSA 560



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 194/400 (48%), Gaps = 43/400 (10%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           IL  C  + ++L+G  +H   +K  +  + ++SN+ I +Y+K  ++  A   F+Q  E +
Sbjct: 14  ILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPN 73

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V S+N++IAAY + +    AH  F  +     QPDL++  +L +  A   D  ++ S+ G
Sbjct: 74  VFSFNALIAAYAKESLIHVAHHLFDQIP----QPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 370 FIMRRGWFMED--------------------------------VIIGNAVVDMYAKLGII 397
            +   G  M+                                 V + N+++  Y+K GI+
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 398 NSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSI 454
             A  VF G+   V+D +SWN++I  Y Q+    +A+ +++ M+    EI  +  T  S+
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI--DMFTLASV 247

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR-IDDAMSLFYQVPRSS 513
           L  +S V  L  G++ HA+ IK     +  V + L+DMY KCG  + ++  +F ++  S 
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307

Query: 514 SVPWNAIISCHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
            V WN +IS +  + +   +AL  FRQM   G  PD  +FV  ++ACS+    S+G+++ 
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFH 367

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            +  +       +     +V ++ + G+L  A    Q MP
Sbjct: 368 ALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 188/426 (44%), Gaps = 18/426 (4%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWN 114
           C  +  +++LH+L   SG    V     L+ +Y+  G L  +   F+ +    R+  +WN
Sbjct: 151 CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWN 210

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLK 171
           SMI  Y +  R  +A+   Y+  +  G   D +T   VL       +L  G + H   +K
Sbjct: 211 SMIVAYGQHKRGLKAL-ALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIK 269

Query: 172 LGFEWDVFVAASLLHMYCRFGLA-NVARKLFDDMPVRDSGSWNAMISGYCQSGN-AVEAL 229
            GF  +  V + L+ MY + G   + +RK+F+++   D   WN MISGY Q+   +VEAL
Sbjct: 270 TGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEAL 329

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLINM 288
           +   +M+  G   D  +    +  C+   +   G   H   +K  +  N + V+N L+ M
Sbjct: 330 ECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTM 389

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y+K G ++ A ++F +M + + V+ NSIIA Y Q      +   F  M  A I P  +TL
Sbjct: 390 YSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITL 449

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           VS+ S  A        +     +        +    + ++D+  + G ++ A  + + +P
Sbjct: 450 VSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMP 509

Query: 409 VK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
                 +W  L+     Y    LA +A   F  +E  N +      Y+ +   YS     
Sbjct: 510 FSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAV-----PYIMLASMYSAARKW 564

Query: 465 RQGIKI 470
            +  +I
Sbjct: 565 EEAARI 570


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/675 (39%), Positives = 385/675 (57%), Gaps = 49/675 (7%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+AC   ++L + KKIH   LK     D  V   L  +Y       +AR+LFD++P   
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN +I  Y  +G    A+D+   M   GV  +  T   +L  C+    I  G+ IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA---YEQSND 325
           +    GLE ++FV   L++ YAK G++  A R+F  M  RDVV+WN++IA    Y   +D
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
            +        MQ+ GI P+  T+V +      L                           
Sbjct: 194 AVQ---LIMQMQEEGICPNSSTIVGVLPTCQCL--------------------------- 223

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
               +YA+         +F+ + V++ +SW+ +I GY  +    EA+++F+MM+  + I+
Sbjct: 224 ----LYAR--------KIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQ-LSGID 270

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P+  T + +LPA SH+ AL+ G   H  +I      D  +   L+DMY KCG+I  A  +
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 330

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++ R   V WNA+I  +GIHG G +AL  F  +L  G++PD ITF+ LL++CSHSGLV
Sbjct: 331 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 390

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG+ +F  M  +F I P ++H  CMVD+ GRAG +  AH+FI+NMP  PD  IW ALL 
Sbjct: 391 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           ACRIH N+ELG   S ++  +  E+ G +VL+SNIY+  G+W+    +R   +D GLKK 
Sbjct: 451 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 510

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PG S IE+N  V  F  G+++H +  +I  +L  L  +MK LGY  + SFV QDVEE+EK
Sbjct: 511 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEK 570

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           E IL  HSE+LAIAFGI++     PI + KNLRVCGDCH   KF++ IT+REI VRD+NR
Sbjct: 571 EQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANR 630

Query: 806 FHHFKDGICSCGDYW 820
           FHHFK+G C+CGD+W
Sbjct: 631 FHHFKNGTCNCGDFW 645



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 261/569 (45%), Gaps = 73/569 (12%)

Query: 25  PL-FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSST 83
           PL F    N L +   C++++S             K+H     H L   S    +V    
Sbjct: 2   PLRFEVKNNYLHLLEACIQSKS--------LTEAKKIHQ----HFLKNTSNADSSVLH-- 47

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL   Y +   +  +R  FD I   +V  WN +I  Y   G    A+D  Y   L  G+R
Sbjct: 48  KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAID-LYHSMLHLGVR 106

Query: 144 PDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+ YT+P VLKAC  L+   DG +IH      G E DVFV  +L+  Y + G+   A++L
Sbjct: 107 PNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRL 166

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  M  RD  +WNAMI+G    G   +A+ ++ +M+ EG+  +  T+  +LP C      
Sbjct: 167 FSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ----- 221

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                                             + +A ++FD M  R+ VSW+++I  Y
Sbjct: 222 ---------------------------------CLLYARKIFDVMGVRNEVSWSAMIGGY 248

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             S+    A   F  MQ +GI PDL T++ +    + L   ++    HG+++ RG F  D
Sbjct: 249 VASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG-FATD 307

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
            +I NA++DMY+K G I+ A  VF  +   D++SWN +I GY  +GL  EA+ +F  +  
Sbjct: 308 TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA 367

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYG 494
              + P+  T++ +L + SH G + +G     R+  + +  D  +        C+VD+ G
Sbjct: 368 LG-LKPDDITFICLLSSCSHSGLVMEG-----RLWFDAMSRDFSIVPRMEHCICMVDILG 421

Query: 495 KCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
           + G ID+A      +P    V  W+A++S   IH   +      +++   G  P+     
Sbjct: 422 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG--PESTGNF 479

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            LL+    +    +   +  + Q+++G+K
Sbjct: 480 VLLSNIYSAAGRWDDAAHIRITQKDWGLK 508



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 2/184 (1%)

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
           +  Y+ +L A     +L +  KIH   +KN    D  V   L  +Y  C ++  A  LF 
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           ++P  S + WN II  +  +G  D A++ +  ML  GVRP+  T+  +L ACS    + +
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G    H   + FG++  +     +VD + + G L  A     +M  R D   W A++  C
Sbjct: 128 GVE-IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGC 185

Query: 628 RIHG 631
            ++G
Sbjct: 186 SLYG 189


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/700 (38%), Positives = 403/700 (57%), Gaps = 44/700 (6%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           LK  RN+ D    H     L F W+     +LL  Y + G     +++FD MP  D  SW
Sbjct: 56  LKNARNVFD----HIPQPNL-FSWN-----TLLSAYSKLGYLQDMQRVFDSMPNHDVVSW 105

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           N+++SGY  +G   E++ + + M  +G V+++ IT +++L + +    +  G  IH  I 
Sbjct: 106 NSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIF 165

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVF----------------------------- 302
           K G +  LFV + L++MYAK G +  A R+F                             
Sbjct: 166 KFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQ 225

Query: 303 --DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
             D M E+D +SW +II    Q+     A   F  M   G   D  T  S+ +       
Sbjct: 226 LFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLA 285

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + +H +I+R   + +++ +G+A++DMY K   +  A AVF  +  K+VISW  ++ 
Sbjct: 286 LDEGKQIHAYIIRTD-YQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLV 344

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY QNG + EA+ +F  M+  NEI+P+  T  S++ + +++ +L +G + H + + + L 
Sbjct: 345 GYGQNGYSEEAVRIFCDMQR-NEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLI 403

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             V V+  L+ +YGKCG ++ A  LF+++     V W A++S +   G+ ++ ++ F  M
Sbjct: 404 CFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETM 463

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           L  G+ PD +TFV +L+ACS +GLV +G  YF  M +E  I P   HY CM+DL  RAG 
Sbjct: 464 LAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGR 523

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A NFI  MP  PDA  W  LL +CR++GN+E+G  A++ L +++ +N   Y+L+S+I
Sbjct: 524 LEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSI 583

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA  GKW+ V ++R   R+ G+KK PG S I+  NKV IF   +R+ P  ++IY +L +L
Sbjct: 584 YAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESL 643

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
             KM   GYVPD SFVL DVE+ EK  +L  HSE+LAIAFG++  P    I++ KNLRVC
Sbjct: 644 YLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVC 703

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GDCHN TK+IS+IT+REI+VRD+ RFH FKDG+CSCGD+W
Sbjct: 704 GDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 252/534 (47%), Gaps = 69/534 (12%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN------- 114
            VK+LH  ++ +      F    L+N Y  LGDL  +R+ FDHI   N+++WN       
Sbjct: 23  QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYS 82

Query: 115 ------------------------SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
                                   S++S Y   G +SE+V  +        +  +  TF 
Sbjct: 83  KLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFS 142

Query: 151 P--VLKACRNLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN------------ 195
              +L + R  VD G++IH  + K G++  +FV + L+ MY + G  N            
Sbjct: 143 TMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEK 202

Query: 196 -------------------VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
                               A +LFD+MP +DS SW  +I+G  Q+G   EA+D   EM 
Sbjct: 203 NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMG 262

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           +EG  MD  T  S+L  C     +  G  IH YI++   + N+FV + L++MY K   ++
Sbjct: 263 IEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVK 322

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
           +A  VF +M  ++V+SW +++  Y Q+     A   F  MQ+  I PD  TL S+ S  A
Sbjct: 323 YAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCA 382

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L         HG  +  G  +  V + NA++ +Y K G +  A  +F  + ++D +SW 
Sbjct: 383 NLASLEEGAQFHGQALASG-LICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWT 441

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            L++GYAQ G A+E I +F+ M   + I P+  T+V +L A S  G + +G      ++K
Sbjct: 442 ALVSGYAQFGKANETISLFETM-LAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK 500

Query: 477 NCLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHG 528
                 +    TC++D+  + GR+++A +   Q+P S  ++ W  ++S   ++G
Sbjct: 501 EHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNG 554



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 197/442 (44%), Gaps = 67/442 (15%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA--------- 298
            + L  C  + N      +H  I++       F+ NNLIN Y K G +++A         
Sbjct: 9   TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68

Query: 299 ----------------------LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
                                  RVFD M   DVVSWNS+++ Y  +     +   +  M
Sbjct: 69  PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMM 128

Query: 337 QQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
            + G +  + +T  ++  + +        R +HG I + G +   + +G+ +VDMYAK G
Sbjct: 129 LKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFG-YQSYLFVGSPLVDMYAKTG 187

Query: 396 IINSACAVFE-------------------------------GLPVKDVISWNTLITGYAQ 424
            IN A  +FE                                +P KD ISW T+ITG  Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NGL  EA++ F+ M        +Q T+ S+L A     AL +G +IHA +I+     ++F
Sbjct: 248 NGLFKEAVDKFKEM-GIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIF 306

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V + L+DMY KC  +  A ++F ++   + + W A++  +G +G  ++A+  F  M    
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           + PD  T  S++++C++   + EG + FH      G+   +     ++ L+G+ G L  A
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHA 425

Query: 605 HNFIQNMPVRPDASIWGALLGA 626
           H     M +R + S W AL+  
Sbjct: 426 HQLFHEMKIRDEVS-WTALVSG 446



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 203/449 (45%), Gaps = 48/449 (10%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H  +   G    +F  + LV+ YA  G ++ +   F+ I  +N+  +N+MI+  +RC
Sbjct: 158 RQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRC 217

Query: 124 -------------------------------GRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
                                          G   EAVD F +  +  G   D +TF  V
Sbjct: 218 RFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGI-EGFCMDQFTFGSV 276

Query: 153 LKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L AC   +   +GK+IH  +++  ++ ++FV ++LL MYC+      A  +F  M  ++ 
Sbjct: 277 LTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNV 336

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AM+ GY Q+G + EA+ I  +M+   +  D  T+ S++  CA   ++  G   H  
Sbjct: 337 ISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQ 396

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            +  GL   + VSN LI +Y K G + HA ++F +M  RD VSW ++++ Y Q       
Sbjct: 397 ALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANET 456

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F TM   GI PD +T V + S  ++             +++             ++D
Sbjct: 457 ISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMID 516

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINP- 446
           + ++ G +  A      +P   D I W TL++    NG     +E+ +   E  +++ P 
Sbjct: 517 LLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNG----NLEIGKWAAESLHKLEPQ 572

Query: 447 NQGTYVSILPAYS------HVGALRQGIK 469
           N  +Y+ +   Y+       V  LR+G++
Sbjct: 573 NPASYILLSSIYAAKGKWDDVAKLRKGMR 601



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 48/247 (19%)

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH---- 524
           K+H R+I+     + F+   L++ YGK G + +A ++F  +P+ +   WN ++S +    
Sbjct: 26  KLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLG 85

Query: 525 -------------------------GIHGQG--DKALNFFRQMLDEG-VRPDHITFVSLL 556
                                    G  G G   +++  +  ML +G V  + ITF ++L
Sbjct: 86  YLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTML 145

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP---- 612
              S+ G V  G R  H    +FG + +L     +VD++ + G +  A+   + +P    
Sbjct: 146 ILSSNRGFVDLG-RQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNI 204

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKWEGV 670
           V  +  I G L   CR         V +++LF+   + +++ +  +++ +  N    E V
Sbjct: 205 VVYNTMITGLL--RCRF-------IVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAV 255

Query: 671 DEVRSLA 677
           D+ + + 
Sbjct: 256 DKFKEMG 262


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/685 (37%), Positives = 413/685 (60%), Gaps = 12/685 (1%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFS-----STKLVNFYANLGDLSFSRHTFDHISYR 108
            +S   LH  + LHALL+V G  +         +++LVN Y N G L  +  TF  + ++
Sbjct: 37  LKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHK 96

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
            +  WN+++   V  G  ++A+  FY   L  G+ PD YT+P VLKAC +L     G+ +
Sbjct: 97  PIIAWNAILRGLVAVGHFTKAIH-FYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWV 155

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +    + +V+V  +++ M+ + G    AR++F++MP RD  SW A+I G   +G  
Sbjct: 156 H-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGEC 214

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           +EAL +  +MR EG+  D + VASILP C R + +  G+ + +  V+ G E +L+VSN +
Sbjct: 215 LEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAV 274

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I+MY K G    A RVF  M+  DVVSW+++IA Y Q+     ++  +  M   G+  + 
Sbjct: 275 IDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNA 334

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +   S+   + +L   +  + +H F+++ G  M DV++G+A++ MYA  G I  A ++FE
Sbjct: 335 IVATSVLPALGKLELLKQGKEMHNFVLKEG-LMSDVVVGSALIVMYANCGSIKEAESIFE 393

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
               KD++ WN++I GY   G    A   F+ +    E  PN  T VSILP  + +GALR
Sbjct: 394 CTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGA-EHRPNFITVVSILPICTQMGALR 452

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           QG +IH  V K+ L  +V V   L+DMY KCG ++    +F Q+   +   +N +IS  G
Sbjct: 453 QGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACG 512

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HGQG+K L F+ QM +EG RP+ +TF+SLL+ACSH+GL+  G   ++ M  ++GI+P++
Sbjct: 513 SHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNM 572

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HY CMVDL GRAG L  A+ FI  MP+ PDA+++G+LLGACR+H  +EL  + ++R+ +
Sbjct: 573 EHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQ 632

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           + +++ G+YVL+SN+YA+  +WE + +VRS+ +D+GL+K PG S I+V + + +F+  + 
Sbjct: 633 LKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSA 692

Query: 706 THPKYEKIYDELRNLTAKMKSLGYV 730
            HP + KI + L +L   MKS  Y+
Sbjct: 693 FHPAFAKIEETLNSLLLVMKSEDYM 717


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 281/770 (36%), Positives = 436/770 (56%), Gaps = 15/770 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +R+H +L  +      + ST L++ Y     +  +R  FD I ++ V  WN+MI+ 
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE---- 175
           Y +     +A+  FY   L  G++ +  TF  VL AC  L D +     ++KL  E    
Sbjct: 176 YAQQDHHEQAIQVFYAMLL-EGVKAERITFIGVLDACSKLKDLEV--AKLVKLCVEEREH 232

Query: 176 ---WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
               D   A +L++ Y   G    A + F    + +     AMI+ Y Q     EAL++ 
Sbjct: 233 DHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRL-ELILATAMITQYTQRERWDEALELF 291

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             M LEGV +D I   ++L  C+    +  G +IH ++ +   + ++   N LINMY K 
Sbjct: 292 KVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKC 351

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A+ VF  M  RDV+SWN+IIAA+ Q +    A      MQ  G++ D ++ V+  
Sbjct: 352 GSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNAL 411

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
            + A        R +H +I+  G    DV++ NA++DMY      + A  VF  + V+D 
Sbjct: 412 PLCATSEALAKGRMIHSWIVESG-IKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQ 470

Query: 413 ISWNTLITGYA-QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +SWN +IT YA Q  L+SEA+ +FQ M+  +   P+  ++V+ L A +   +L +G  +H
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQ-LHGFMPDVISFVAALSACAAQASLAEGKLLH 529

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            R+ +  L  ++ VA  +++MY K G +  A  +F ++P    + WN +IS    HG  D
Sbjct: 530 DRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHAD 589

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF-GIKPHLKHYGC 590
           + L FFR+M  EG  P+ +TFVS+++ACSH GLV +G + F  +  +F  I P  +HY C
Sbjct: 590 QVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYC 649

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVDL  RAG L  A  FI   P++PD  I   +LGA ++H ++E    +++ L E+  + 
Sbjct: 650 MVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDR 709

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YV++SN+Y  VGK +   ++R L  ++ ++K P +SSI V  +V  F+TG+ T+ + 
Sbjct: 710 SAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNART 769

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
            +I +EL  L+ +M   GY PD + +L DV +++K+ +L+ HSE+LAIAFG+IS+ P + 
Sbjct: 770 PEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTS 829

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++I KNLRVCGDCH  TKFIS+IT REI+VRDS+RFHHF +G CSCGDYW
Sbjct: 830 LRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 165/593 (27%), Positives = 288/593 (48%), Gaps = 13/593 (2%)

Query: 49  DFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           D  D+      L   K +HA +  S   +  F    LV  Y + G L  ++  FD +  +
Sbjct: 3   DLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQ 62

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKK 164
           +  TW  +I  + + G   +A+  F    L  G+ P    F  VL AC      L +G++
Sbjct: 63  DALTWARLIRAHGQIGDSEQALHLFRSMQL-EGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  +     E D +V+ +LLHMY +      ARK+FD +  +    WNAMI+ Y Q  +
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV--KHGLEFNLFVS 282
             +A+ +   M LEGV  + IT   +L  C++  ++    L+ L +   +H    +   +
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             L+N Y   G +  A R F +    +++   ++I  Y Q      A   F  M   G++
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D +  +++ +  +        R +HGF MR   F   V  GNA+++MY K G +  A  
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGF-MREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF  +  +DVISWNT+I  + Q+    EA+ +  +M + + +  ++ ++V+ LP  +   
Sbjct: 360 VFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLM-QLDGVKADKISFVNALPLCATSE 418

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL +G  IH+ ++++ +  DV +   ++DMYG C   DDA  +F  +     V WNA+I+
Sbjct: 419 ALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMIT 478

Query: 523 CHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
            +    +   +AL  F+QM   G  PD I+FV+ L+AC+    ++EG +  H    E G+
Sbjct: 479 AYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG-KLLHDRIRETGL 537

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           + ++     +++++ ++G L +A      MP+ PD   W  ++ A   HG+ +
Sbjct: 538 ESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-PDVISWNGMISAFAQHGHAD 589



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 195/420 (46%), Gaps = 30/420 (7%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A +L V A S ++  G  +H  I K  ++   F+ + L+ MY   G +  A   FD+M  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRS 366
           +D ++W  +I A+ Q  D   A   F +MQ  G+ P     V+ L +  A        R 
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 367 VHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
           +HG +  RG  ME D  +   ++ MY K   +  A  VF+G+  K V+ WN +IT YAQ 
Sbjct: 122 IHGVL--RGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQ 179

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL------ 479
               +AI+VF  M     +   + T++ +L A S +  L       A+++K C+      
Sbjct: 180 DHHEQAIQVFYAM-LLEGVKAERITFIGVLDACSKLKDLEV-----AKLVKLCVEEREHD 233

Query: 480 -CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              D   AT LV+ YG CG ++ A   F +  R   +   A+I+ +    + D+AL  F+
Sbjct: 234 HLHDSSFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFK 292

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            ML EGV+ D I  +++L ACS    + EG R  H    E     H+     +++++G+ 
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSGPRGLEEG-RIIHGFMREIRFDRHVNAGNALINMYGKC 351

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN----------MELGAVASDRLFEVDS 648
           G L  A    ++M  R D   W  ++ A   H            M+L  V +D++  V++
Sbjct: 352 GSLEEAVEVFRSMQHR-DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNA 410



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y  +L   +   +L  G ++HAR+ K+ +    F+   LV MY  CG + DA + F ++P
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS-GLVSEGQ 569
              ++ W  +I  HG  G  ++AL+ FR M  EGV P +  FV++L ACS    L+ EG+
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 570 R 570
           R
Sbjct: 121 R 121


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 284/816 (34%), Positives = 456/816 (55%), Gaps = 38/816 (4%)

Query: 24  RPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKI--KTVFS 81
           +PL + AA    + P      S              +H  + L   L+ +G +       
Sbjct: 33  KPLTTTAAGQAALQP------SEAAALLTAAARARDIHLGRALQGHLLRTGSLLETDAVV 86

Query: 82  STKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           +  L+  Y+    ++ +R  FD   +  R++ +W +M S   R G  +EA+  F + TL 
Sbjct: 87  ANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGE-TLE 145

Query: 140 SGLRPDFYTFPPVLKACRNL----VDGKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGL 193
            GL P+ +T     +AC       + G  +   V KLGF W  DV V  +L+ M+ + G 
Sbjct: 146 EGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF-WGTDVSVGCALIDMFAKNGD 204

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
               R++FD +  R    W  +I+ Y QSG + EA+++  +M   G   D  T++S+L  
Sbjct: 205 LVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSA 264

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF--GMMRHALR-VFDQMMERDV 310
           C    +   G  +H   ++ GLE +  VS  L++MYAK   G   H  R VF++M + +V
Sbjct: 265 CTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNV 324

Query: 311 VSWNSIIAAY----EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ++W ++++ Y     Q N  +     F  M   GI+P+ +T  S+    A L D  + R 
Sbjct: 325 MAWTALLSGYVQRGSQDNQVMI---LFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQ 381

Query: 367 VHGFIMRRGWFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
           +H   ++    + D+ ++GNA+V MYA+ G I  A   F+ L  K+++S++  + G  + 
Sbjct: 382 IHTHCVKSN--LADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGR- 438

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
              S   + +Q+  E  E+  +  T+ S++ A + VG L +G ++HA  +K     D  +
Sbjct: 439 ---SNTYQDYQI--ERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAI 493

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              LV MY +CG + DA  +F ++   + + W ++IS    HG   +AL  F  M+  GV
Sbjct: 494 GNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGV 553

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +P+ +T++++L+ACSH+GLV EG+ +F MMQ+  G+ P ++HY CMVDL GR+G +  A 
Sbjct: 554 KPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDAL 613

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
           +FI  MP + DA +W  LLGAC+ H NM++G +A++ + +++ ++   YVL+SN+YA  G
Sbjct: 614 DFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAG 673

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
            W+ V  +RSL RD+ L K  G S + V+N +  F  G+ +HP+ E+IY +L  L  ++K
Sbjct: 674 LWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIK 733

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS-SPPKSPIQIFKNLRVCGDCH 784
            +GYVPD S VL D+ ++ KE  L  HSE++A+AFG+IS +    PI+IFKNLRVC DCH
Sbjct: 734 VMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVCVDCH 793

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +  K++S+ T REII+RDSNRFH  KDG CSCG+YW
Sbjct: 794 SALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/744 (36%), Positives = 390/744 (52%), Gaps = 117/744 (15%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K V S   L++ YA  G +  +R  FD++  +N  +WN +++ YV  GR+ EA       
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEA------- 192

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
                                         C + +   +WD+     L+  + R      
Sbjct: 193 ------------------------------CLLFESKSDWDLISWNCLMGGFVRKKKLGD 222

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR LFD MPVRD+ SWN MISGY Q G   +A  + DE         P            
Sbjct: 223 ARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE--------SPTR---------- 264

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                                ++F    +++ Y + GM+  A   FD+M E++ VS+N++
Sbjct: 265 ---------------------DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAM 303

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           IA Y Q+     A   F +M                        CRN  S         W
Sbjct: 304 IAGYVQTKKMDIARELFESMP-----------------------CRNISS---------W 331

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
                   N ++  Y ++G I  A   F+ +P +D +SW  +I GYAQ+G   EA+ +F 
Sbjct: 332 --------NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFV 383

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            +++  E + N+ T+   L   + + AL  G +IH + +K       FV   L+ MY KC
Sbjct: 384 EIKQDGE-SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G ID+A   F  +     V WN +++ +  HG G +AL  F  M   GV+PD IT V +L
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +ACSH+GL+  G  YF+ M +++G+ P  KHY CM+DL GRAG L  A + I+NMP +P 
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A+ WGALLGA RIHGN ELG  A++ +F+++ +N G YVL+SN+YA  G+W   D++RS 
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            RD G++K PG+S +EV NK+  F  G+ +HP+ E+IY  L  L  KM+  GYV     V
Sbjct: 623 MRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLV 682

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L DVEE+EKEH+L  HSE+LA+AFGI++ P   PI++ KNLRVC DCH+  K IS+I  R
Sbjct: 683 LHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGR 742

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
            II+RDS+RFHHF +G CSCGDYW
Sbjct: 743 LIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 231/497 (46%), Gaps = 46/497 (9%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + +FS   ++  Y     L  +R  FD +  ++V +WNS++S Y + G + EA + F   
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIH--CSVLKLGFEWDVFVAASLLHMYCRFGLA 194
              + +     ++  +L A    V   +I   C + +   +WD+     L+  + R    
Sbjct: 169 PEKNSI-----SWNGLLAA---YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKL 220

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA------ 248
             AR LFD MPVRD+ SWN MISGY Q G   +A  + DE     V      V+      
Sbjct: 221 GDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNG 280

Query: 249 ------SILPVCARSDNILSGLLIHLYIVKHGLEF--NLFVS---------NNLINMYAK 291
                 +        + +    +I  Y+    ++    LF S         N +I  Y +
Sbjct: 281 MLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQ 340

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A + FD M +RD VSW +IIA Y QS     A   F  ++Q G   +  T    
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            S  A +      + +HG  ++ G +     +GNA++ MY K G I+ A   FEG+  KD
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMG-YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V+SWNT++ GYA++G   +A+ VF+ M+    + P++ T V +L A SH G L +G +  
Sbjct: 460 VVSWNTMLAGYARHGFGRQALTVFESMKTAG-VKPDEITMVGVLSACSHTGLLDRGTEYF 518

Query: 472 ARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGI 526
             + K+   + V       TC++D+ G+ GR+++A  L   +P +  +  W A++    I
Sbjct: 519 YSMTKD---YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRI 575

Query: 527 HGQ---GDKALNFFRQM 540
           HG    G+KA     +M
Sbjct: 576 HGNTELGEKAAEMVFKM 592



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 205/461 (44%), Gaps = 28/461 (6%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLH----ALLVVSGKIKTVFS 81
           L +A  ++ +I   CL  ES+  D+D +  +C     V++        L     ++   S
Sbjct: 179 LLAAYVHNGRIEEACLLFESKS-DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS 237

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
              +++ YA  G LS +R  FD    R+V+TW +M+S YV+ G L EA   F +    + 
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE 297

Query: 142 LRPDF----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           +  +     Y     +   R L +   + C  +     W+  +       Y + G    A
Sbjct: 298 VSYNAMIAGYVQTKKMDIARELFE--SMPCRNIS---SWNTMITG-----YGQIGDIAQA 347

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           RK FD MP RD  SW A+I+GY QSG+  EAL++  E++ +G S++  T    L  CA  
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  IH   VK G     FV N L+ MY K G +  A   F+ + E+DVVSWN+++
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y +      A   F +M+ AG++PD +T+V + S  +              + +    
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIE 433
           +        ++D+  + G +  A  +   +P +    SW  L+     +G   L  +A E
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           +   ME       N G YV +   Y+  G      K+ +++
Sbjct: 588 MVFKMEP-----QNSGMYVLLSNLYAASGRWVDADKMRSKM 623



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 203/455 (44%), Gaps = 28/455 (6%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+      +  + R G  + A  +F+ MP R S S+NAMISGY ++     A ++ D+M 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              +    + +   +  C   D   +  L  L   K  + +     N+L++ YA+ G + 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGD---ARRLFDLMPEKDVVSW-----NSLLSGYAQNGYVD 159

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  VFD M E++ +SWN ++AAY  +     A   F +        DL++   L     
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFV 215

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           +     ++R +   +  R     D I  N ++  YA+ G ++ A  +F+  P +DV +W 
Sbjct: 216 RKKKLGDARWLFDKMPVR-----DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +++GY QNG+  EA   F  M E NE+     +Y +++  Y       + + I   + +
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQT----KKMDIARELFE 321

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
           +  C ++     ++  YG+ G I  A   F  +P+   V W AII+ +   G  ++ALN 
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F ++  +G   +  TF   L+ C+    +  G++  H    + G          ++ ++ 
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAALELGKQ-IHGQAVKMGYGTGCFVGNALLAMYF 440

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           + G +  A++  + +  + D   W  +L     HG
Sbjct: 441 KCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARHG 474



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 126/261 (48%), Gaps = 57/261 (21%)

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           ++GL+  G  YF+ M EE+ + P  KHY CM+DL GR   L                   
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           GALLGA RIHGN ELG  A+   F++  +N G                      S  RD 
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G++K PG+S  EV NK+  F  G                L+ + +++G++ +    ++  
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG--------------LFLSRERENIGFLEELDLKMR-E 902

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN-LRVCGDCHNWTKFISQITEREII 799
            E+EKE  L   SE LA A GI++ P   P ++ K  + VC DC +  K +S+I  R I 
Sbjct: 903 REEEKERTLKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           +RDS   H F + ICSCG+YW
Sbjct: 963 LRDS---HRFNESICSCGEYW 980



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 76/368 (20%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N  I+ + + G    AL VF+ M  R  VS+N++I+ Y +++    A   F  M +    
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE---- 108

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
                                                D+   N ++  Y +   +  A  
Sbjct: 109 ------------------------------------RDLFSWNVMLTGYVRNCRLGDARR 132

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ +P KDV+SWN+L++GYAQNG   EA EVF  M E N I+ N      +L AY H G
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWN-----GLLAAYVHNG 187

Query: 463 ALRQGIKIHARVIKNCLCF------DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
                     R+ + CL F      D+    CL+  + +  ++ DA  LF ++P   ++ 
Sbjct: 188 ----------RIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS 237

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN +IS +   G     L+  R++ DE    D  T+ ++++    +G++ E + +F  M 
Sbjct: 238 WNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           E+  +      Y  M+  + +   + +A    ++MP R + S W  +     I G  ++G
Sbjct: 294 EKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTM-----ITGYGQIG 342

Query: 637 AVASDRLF 644
            +A  R F
Sbjct: 343 DIAQARKF 350


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/800 (33%), Positives = 428/800 (53%), Gaps = 78/800 (9%)

Query: 65  RLHALLVVSGKIKTVF--SSTKLVN----FYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           R   L +  G IK     S T++V+    FY     L F+   FD +  R+   WN ++ 
Sbjct: 3   RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFE 175
           V +R G   +AV+ F +    SG +    T   +L+ C N     +G++IH  VL+LG E
Sbjct: 63  VNLRSGNWEKAVELFREMQF-SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            +V +  SL+ MY R G   ++RK+F+ M  R+  SWN+++S Y + G   +A+ +LDEM
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181

Query: 236 RLEGVSMDPIT-----------------------------------VASILPVCARSDNI 260
            + G+  D +T                                   ++S+L   A   ++
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  IH YI+++ L ++++V   LI+MY K G + +A  VFD M  +++V+WNS+++  
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             +     A      M++ GI+PD +T  SL S  A L     +  V G +  +G     
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG----- 356

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
                                         +V+SW  + +G ++NG    A++VF  M+E
Sbjct: 357 ---------------------------VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              + PN  T  ++L     +  L  G ++H   ++  L  D +VAT LVDMYGK G + 
Sbjct: 390 -EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A+ +F+ +   S   WN ++  + + G+G++ +  F  ML+ G+ PD ITF S+L+ C 
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           +SGLV EG +YF +M+  +GI P ++H  CMVDL GR+G+L  A +FIQ M ++PDA+IW
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           GA L +C+IH ++EL  +A  RL  ++  N   Y++M N+Y+N+ +WE V+ +R+L R+ 
Sbjct: 569 GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
            ++    WS I+++  V IFY   +THP    IY EL  L ++MK  GYVPD S + QD+
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDI 688

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
            + EKE +L  H+E+LA+ +G+I     +PI++ KN  +C D H   K++S +  REI++
Sbjct: 689 SDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVL 748

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           ++  R HHF+DG CSC D W
Sbjct: 749 QEGARVHHFRDGKCSCNDSW 768



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 231/530 (43%), Gaps = 101/530 (19%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L Q C+        +++H  ++  G    V     L+  Y+  G L  SR  F+ +  RN
Sbjct: 95  LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD------ 161
           + +WNS++S Y + G + +A+    +  +  GL+PD  T+  +L   A + L        
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEIC-GLKPDIVTWNSLLSGYASKGLSKDAIAVL 213

Query: 162 ------------------------------GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
                                         GK IH  +L+    +DV+V  +L+ MY + 
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    AR +FD M  ++  +WN+++SG   +    +A  ++  M  EG+  D IT     
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW---- 329

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER--- 308
                                          N+L + YA  G    AL V  +M E+   
Sbjct: 330 -------------------------------NSLASGYATLGKPEKALDVIGKMKEKGVA 358

Query: 309 -DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
            +VVSW +I +   ++ +   A   F  MQ+ G+ P+  T+ +L  I+  L+   + + V
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HGF +R+   + D  +  A+VDMY K G + SA  +F G+  K + SWN ++ GYA  G 
Sbjct: 419 HGFCLRKN-LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK----IHAR-----VIKNC 478
             E I  F +M E   + P+  T+ S+L    + G +++G K    + +R      I++C
Sbjct: 478 GEEGIAAFSVMLEAG-MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
                   +C+VD+ G+ G +D+A      +  +  +  W A +S   IH
Sbjct: 537 --------SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/761 (35%), Positives = 425/761 (55%), Gaps = 7/761 (0%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LH  ++  G    +F+   L+N Y + G L  +   FD +   N  ++ ++   + R 
Sbjct: 23  KSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS 82

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVDG-KKIHCSVLKLGFEWDVFV 180
            +  +            G   + + F  +LK     +L D    +H  V KLG + D FV
Sbjct: 83  HQF-QRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+  Y   G  + AR++FD +  +D  SW  M++ Y ++    ++L +  +MR+ G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +  T+++ L  C   +    G  +H   +K   + +L+V   L+ +Y K G +  A +
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ-PDLLTLVSLTSIVAQLN 359
            F++M + D++ W+ +I+ Y QS+    A   F  M+Q+ +  P+  T  S+    A L 
Sbjct: 262 FFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLV 321

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                  +H  +++ G    +V + NA++D+YAK G I ++  +F G   K+ ++WNT+I
Sbjct: 322 LLNLGNQIHSCVLKVG-LDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY Q G   +A+ +F  M    +I P + TY S+L A + + AL  G +IH+  IK   
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGL-DIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMY 439

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D  VA  L+DMY KCGRIDDA   F ++ +   V WNA+I  + IHG G +ALN F  
Sbjct: 440 NKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDM 499

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M     +P+ +TFV +L+ACS++GL+ +G+ +F  M +++GI+P ++HY CMV L GR+G
Sbjct: 500 MQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSG 559

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
               A   I  +P +P   +W ALLGAC IH N++LG V + R+ E++ ++   +VL+SN
Sbjct: 560 QFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSN 619

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           +YA   +W+ V  VR   + + +KK PG S +E    V  F  G+ +HP  + I+  L  
Sbjct: 620 MYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEW 679

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           L  K +  GYVPD S VL DVE+DEKE +L  HSERLA+AFG+I  P    I+I KNLR+
Sbjct: 680 LYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRI 739

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           C DCH   K +S+I +REI++RD NRFHHF+ G+CSCGDYW
Sbjct: 740 CVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 243/470 (51%), Gaps = 3/470 (0%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK +HC +LK G   D+F    LL+ Y  FG    A KLFD+MP+ ++ S+  +  G+ +
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           S     A  +L  +  EG  ++     ++L +    D   + L +H Y+ K G + + FV
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
              LI+ Y+  G +  A +VFD +  +D+VSW  ++A Y ++     +   F  M+  G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P+  T+ +       L   +  +SVHG  ++   +  D+ +G A++++Y K G I  A 
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVC-YDRDLYVGIALLELYTKSGEIAEAQ 260

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             FE +P  D+I W+ +I+ YAQ+  + EA+E+F  M + + + PN  T+ S+L A + +
Sbjct: 261 QFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
             L  G +IH+ V+K  L  +VFV+  L+D+Y KCG I++++ LF      + V WN II
Sbjct: 321 VLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
             +   G G+KALN F  ML   ++P  +T+ S+L A S S +  E  R  H +  +   
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRA-SASLVALEPGRQIHSLTIKTMY 439

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                    ++D++ + G +  A      M  + + S W AL+    IHG
Sbjct: 440 NKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS-WNALICGYSIHG 488



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 185/361 (51%), Gaps = 4/361 (1%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           MD  + A++L    R+ +  +G  +H +I+KHG   +LF  N L+N Y  FG +  A ++
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M   + VS+ ++   + +S+    A      + + G + +     +L  ++  ++  
Sbjct: 61  FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
               SVH ++ + G    D  +G A++D Y+  G +++A  VF+G+  KD++SW  ++  
Sbjct: 121 DTCLSVHAYVYKLG-HQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVAC 179

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           YA+N    +++ +F  M       PN  T  + L + + + A + G  +H   +K C   
Sbjct: 180 YAENYCHEDSLLLFCQMRIMG-YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDR 238

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D++V   L+++Y K G I +A   F ++P+   +PW+ +IS +    +  +AL  F +M 
Sbjct: 239 DLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMR 298

Query: 542 DEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
               V P++ TF S+L AC+   L++ G +  H    + G+  ++     ++D++ + G 
Sbjct: 299 QSSVVVPNNFTFASVLQACASLVLLNLGNQ-IHSCVLKVGLDSNVFVSNALMDVYAKCGE 357

Query: 601 L 601
           +
Sbjct: 358 I 358



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 13/231 (5%)

Query: 41  LENESREIDFDDLFQ---SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           L+ +  E+ +  + +   S   L   +++H+L + +   K    +  L++ YA  G +  
Sbjct: 402 LDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDD 461

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           +R TFD +  ++  +WN++I  Y   G   EA++ F      S  +P+  TF  VL AC 
Sbjct: 462 ARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLF-DMMQQSNSKPNKLTFVGVLSACS 520

Query: 158 N--LVDGKKIHCSVL--KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS-GSW 212
           N  L+D  + H   +    G E  +     ++ +  R G  + A KL  ++P + S   W
Sbjct: 521 NAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVW 580

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT---VASILPVCARSDNI 260
            A++ G C     ++   +  +  LE    D  T   ++++     R DN+
Sbjct: 581 RALL-GACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNV 630


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/706 (38%), Positives = 397/706 (56%), Gaps = 40/706 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVR 207
           +L  C+ L   + IH  ++K G     +  + LL  +C     F     A  +F+ +   
Sbjct: 8   LLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLE-FCILSPNFDGLPYAISVFETIQEP 66

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +   WN M  G+  S + V A+ +   M   G+  +  T   +L  CA+      G  IH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIH 126

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD------------------------ 303
            +++K G E +L+V  +LI+MY K G  + A +VFD                        
Sbjct: 127 GHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIE 186

Query: 304 -------QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
                  ++  +DVVSWN+II+ Y  + +   A   F  M +  ++PD  T+V++ S  A
Sbjct: 187 SAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACA 246

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           Q    +  R VH +I   G    ++ I NA++D+Y+K G + +AC +F+GL  KDVISWN
Sbjct: 247 QSGSIQLGRQVHSWIDDHG-LGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           T+I GY    L  EA+ +FQ M    E NPN  T +SILPA + +GA+  G  IH  + K
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGE-NPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364

Query: 477 NC--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
               +     + T L+DMY KCG I+ A  +F  +   +    NA+I    +HG+ + A 
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAF 424

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F +M   G+ PD ITFV LL+ACSHSG++  G+R F  M + + I P L+HYGCM+DL
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDL 484

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            G  G    A   I  M + PD  IW +LL AC++HGN+ELG   + +L +++ EN G Y
Sbjct: 485 LGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSY 544

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SNIYA  G+W  V  +R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY
Sbjct: 545 VLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  +   ++  G+VPD S VLQ++EE+ K+  L  HSE+LAIAFG+IS+ P + + I 
Sbjct: 605 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIV 664

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC +CH  TK IS+I +REII RD  RFHHF+DG+CSC DYW
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 268/529 (50%), Gaps = 42/529 (7%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRN 109
           L  +C  L  ++ +HA ++ +G   T ++ ++L+ F     N   L ++   F+ I   N
Sbjct: 8   LLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPN 67

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIH 166
           +  WN+M   +        A+   Y   ++ GL P+ YTFP +LK+C  L    +G++IH
Sbjct: 68  LLIWNTMFRGHALSSDPVSAIK-LYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIH 126

Query: 167 CSVLKLGFEWDVFVAASLLHMYCR-------------------------------FGLAN 195
             VLKLG+E D++V  SL+ MY +                                G   
Sbjct: 127 GHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIE 186

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            A+K+FD++PV+D  SWNA+ISGY  +GN  EALD+  EM    V  D  T+ +++  CA
Sbjct: 187 SAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACA 246

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +S +I  G  +H +I  HGL  NL + N LI++Y+K G +  A  +F  +  +DV+SWN+
Sbjct: 247 QSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNT 306

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  Y   N    A   F  M ++G  P+ +T++S+    AQL      R +H +I +R 
Sbjct: 307 MIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRI 366

Query: 376 WFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
             + +   +  +++DMYAK G I +A  VF  +  + + + N +I G+A +G A+ A ++
Sbjct: 367 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDI 426

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMY 493
           F  M + N I P+  T+V +L A SH G L  G +I   + +N  +   +    C++D+ 
Sbjct: 427 FSRMRK-NGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLL 485

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           G  G   +A  +   +      V W +++    +HG  +   +F ++++
Sbjct: 486 GHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLI 534



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 189/402 (47%), Gaps = 9/402 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G +  ++  FD I  ++V +WN++IS Y   G   EA+D F + 
Sbjct: 167 RDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEM 226

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + ++PD  T   V+ AC    ++  G+++H  +   G   ++ +  +L+ +Y + G 
Sbjct: 227 -MKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGE 285

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF  +  +D  SWN MI GY       EAL +  EM   G + + +T+ SILP 
Sbjct: 286 VETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPA 345

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA+   I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VF+ M  R + 
Sbjct: 346 CAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLS 405

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           + N++I  +        A   F+ M++ GI+PD +T V L S  +        R +   +
Sbjct: 406 ACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM 465

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            +       +     ++D+   LG+   A  +   + ++ D + W +L+     +G    
Sbjct: 466 TQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVEL 525

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
                Q + +    NP  G+YV +   Y+  G   +   I A
Sbjct: 526 GESFAQKLIKIEPENP--GSYVLLSNIYATAGRWNEVANIRA 565


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/770 (36%), Positives = 435/770 (56%), Gaps = 15/770 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +R+H +L  +      + ST L++ Y     +  +R  FD I ++ V  WN+MI+ 
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITA 175

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE---- 175
           Y +     +A+  FY   L  G++ +  TF  VL AC  L D +     ++KL  E    
Sbjct: 176 YAQQDHHEQAIQVFYAMLL-EGVKAERITFIGVLDACSKLKDLEV--AKLVKLCVEEREH 232

Query: 176 ---WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
               D   A +L++ Y   G    A + F    + +     AMI+ Y Q     EAL++ 
Sbjct: 233 DHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRL-ELILATAMITQYTQRERWDEALELF 291

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             M LEGV +D I   ++L  C+    +  G +IH ++ +   + ++   N LINMY K 
Sbjct: 292 KVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKC 351

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A+ VF  M  RDV+SWN+IIAA+ Q +    A      MQ  G++ D ++ V+  
Sbjct: 352 GSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNAL 411

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
            + A        R +H +I+  G    DV++ NA++DMY      + A  VF  +  +D 
Sbjct: 412 PLCAASEALAKGRMIHSWIVESG-IKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQ 470

Query: 413 ISWNTLITGYA-QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +SWN +IT YA Q  L+SEA+ +FQ M+  +   P+  ++V+ L A +   +L +G  +H
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQ-LHGFMPDVISFVAALSACAAQASLAEGKLLH 529

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            R+ +  L  ++ VA  +++MY K G +  A  +F ++P    + WN +IS    HG  D
Sbjct: 530 DRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHAD 589

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF-GIKPHLKHYGC 590
           + L FFR+M  EG  P+ +TFVS+++ACSH GLV +G + F  +  +F  I P  +HY C
Sbjct: 590 QVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYC 649

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVDL  RAG L  A  FI   P++PD  I   +LGA ++H ++E    +++ L E+  + 
Sbjct: 650 MVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDR 709

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YV++SN+Y  VGK +   ++R L  ++ ++K P +SSI V  +V  F+TG+ T+ + 
Sbjct: 710 SAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNART 769

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
            +I +EL  L+ +M   GY PD + +L DV +++K+ +L+ HSE+LAIAFG+IS+ P + 
Sbjct: 770 PEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTS 829

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++I KNLRVCGDCH  TKFIS+IT REI+VRDS+RFHHF +G CSCGDYW
Sbjct: 830 LRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/593 (27%), Positives = 288/593 (48%), Gaps = 13/593 (2%)

Query: 49  DFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           D  D+      L   K +HA +  S   +  F    LV  Y + G L  ++  FD +  +
Sbjct: 3   DLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQ 62

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKK 164
           +  TW  +I  + + G   +A+  F    L  G+ P    F  VL AC      L +G++
Sbjct: 63  DALTWARLIRAHGQIGDSEQALHLFRSMQL-EGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  +     E D +V+ +LLHMY +      ARK+FD +  +    WNAMI+ Y Q  +
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV--KHGLEFNLFVS 282
             +A+ +   M LEGV  + IT   +L  C++  ++    L+ L +   +H    +   +
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             L+N Y   G +  A R F +    +++   ++I  Y Q      A   F  M   G++
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D +  +++ +  +        R +HGF MR   F   V  GNA+++MY K G +  A  
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGF-MREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF  +  +DVISWNT+I  + Q+    EA+ +  +M + + +  ++ ++V+ LP  +   
Sbjct: 360 VFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLM-QLDGVKADKISFVNALPLCAASE 418

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL +G  IH+ ++++ +  DV +   ++DMYG C   DDA  +F  +     V WNA+I+
Sbjct: 419 ALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMIT 478

Query: 523 CHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
            +    +   +AL  F+QM   G  PD I+FV+ L+AC+    ++EG +  H    E G+
Sbjct: 479 AYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG-KLLHDRIRETGL 537

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           + ++     +++++ ++G L +A      MP+ PD   W  ++ A   HG+ +
Sbjct: 538 ESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISWNGMISAFAQHGHAD 589



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 195/420 (46%), Gaps = 30/420 (7%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A +L V A S ++  G  +H  I K  ++   F+ + L+ MY   G +  A   FD+M  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRS 366
           +D ++W  +I A+ Q  D   A   F +MQ  G+ P     V+ L +  A        R 
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 367 VHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
           +HG +  RG  ME D  +   ++ MY K   +  A  VF+G+  K V+ WN +IT YAQ 
Sbjct: 122 IHGVL--RGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQ 179

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL------ 479
               +AI+VF  M     +   + T++ +L A S +  L       A+++K C+      
Sbjct: 180 DHHEQAIQVFYAM-LLEGVKAERITFIGVLDACSKLKDLEV-----AKLVKLCVEEREHD 233

Query: 480 -CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              D   AT LV+ YG CG ++ A   F +  R   +   A+I+ +    + D+AL  F+
Sbjct: 234 HLHDSSFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFK 292

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            ML EGV+ D I  +++L ACS    + EG R  H    E     H+     +++++G+ 
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSGPRGLEEG-RMIHGFMREIRFDRHVNAGNALINMYGKC 351

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN----------MELGAVASDRLFEVDS 648
           G L  A    ++M  R D   W  ++ A   H            M+L  V +D++  V++
Sbjct: 352 GSLEEAVEVFRSMQHR-DVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNA 410



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y  +L   +   +L  G ++HAR+ K+ +    F+   LV MY  CG + DA + F ++P
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS-GLVSEGQ 569
              ++ W  +I  HG  G  ++AL+ FR M  EGV P +  FV++L ACS    L+ EG+
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 570 R 570
           R
Sbjct: 121 R 121


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/754 (35%), Positives = 425/754 (56%), Gaps = 33/754 (4%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           +  L+  Y+  G ++ +R+ FD +   R++ +W +M S   R G   E++    +  L S
Sbjct: 87  ANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM-LES 145

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVL--------KLGFEW--DVFVAASLLHMYCR 190
           GL P+ YT   V  AC       +++C V         K+G  W  D+ V ++L+ M  R
Sbjct: 146 GLLPNAYTLCAVAHACFP----HELYCLVGGVVLGLVHKMGL-WGTDIAVGSALIDMLAR 200

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            G    ARK+FD +  +    W  +IS Y Q   A EA++I  +   +G   D  T++S+
Sbjct: 201 NGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSM 260

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM---MRHALRVFDQMME 307
           +  C    ++  GL +H   ++ G   +  VS  L++MYAK  +   M +A +VF++M +
Sbjct: 261 ISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRK 320

Query: 308 RDVVSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            DV+SW ++I+ Y QS          F  M    I+P+ +T  S+    A ++D  + R 
Sbjct: 321 NDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQ 380

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH  +++         +GNA+V MYA+ G +  A  VF  L  + +IS  T      +  
Sbjct: 381 VHAHVIKSNQAAAHT-VGNALVSMYAESGCMEEARRVFNQLYERSMISCIT------EGR 433

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
            A     + +M     ++  +  T+ S++ A + VG L +G ++HA  +K     D FV+
Sbjct: 434 DAPLDHRIGRM-----DMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVS 488

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
             LV MY +CG ++DA   F ++   + + W ++IS    HG  ++AL+ F  M+  GV+
Sbjct: 489 NSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVK 548

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +T++++L+ACSH GLV EG+ YF  MQ + G+ P ++HY CMVDL  R+G +  A  
Sbjct: 549 PNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALE 608

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
           FI  MP++ DA +W  LLGACR H N+E+G +A+  + E++  +   YVL+SN+YA+ G 
Sbjct: 609 FINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGL 668

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V  +RS  RD  L K  G S +EV N    F  G+ +HP+ + IY +L  L  ++K 
Sbjct: 669 WDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKG 728

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
           +GYVPD S VL D+ ++ KE  L  HSE++A+AFG+I++    PI+IFKNLRVC DCH+ 
Sbjct: 729 MGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSA 788

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            K++S+ T REII+RDSNRFH  KDG CSCG+YW
Sbjct: 789 IKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 255/533 (47%), Gaps = 28/533 (5%)

Query: 162 GKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGY 219
           G+ +H  +L+    + D  VA SLL +Y R G    AR +FD M  +RD  SW AM S  
Sbjct: 67  GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-- 277
            ++G   E+L ++ EM   G+  +  T+ ++   C   + +   +   +  + H +    
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHE-LYCLVGGVVLGLVHKMGLWG 185

Query: 278 -NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++ V + LI+M A+ G +  A +VFD ++E+ VV W  +I+ Y Q      A   F   
Sbjct: 186 TDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDF 245

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            + G +PD  T+ S+ S   +L   R    +H   +R G F  D  +   +VDMYAK  I
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMG-FASDACVSCGLVDMYAKSNI 304

Query: 397 ---INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF--QMMEECNEINPNQGTY 451
              ++ A  VFE +   DVISW  LI+GY Q+G+    + V   +M+ E   I PN  TY
Sbjct: 305 EQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNE--SIKPNHITY 362

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            SIL A +++     G ++HA VIK+       V   LV MY + G +++A  +F Q+  
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
            S      +ISC  I    D  L+     +D G+     TF SL++A +  G++++GQ+ 
Sbjct: 423 RS------MISC--ITEGRDAPLDHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQ- 471

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H M  + G          +V ++ R G+L  A      +  R   S W +++     HG
Sbjct: 472 LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-WTSMISGLAKHG 530

Query: 632 NMELG-AVASDRLFEVDSENVGYYVLMSNIYANVG-KWEGVDEVRSLARDRGL 682
             E   ++  D +      N   Y+ + +  ++VG   EG +  RS+ RD GL
Sbjct: 531 YAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL 583



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 189/402 (47%), Gaps = 22/402 (5%)

Query: 30  AANSLQISPDCLEN--ESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTK 84
           A  +++I  D LE+  E        +  +CT+L  V+   +LH+L +  G       S  
Sbjct: 235 AEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCG 294

Query: 85  LVNFYANLG---DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           LV+ YA       + ++   F+ +   +V +W ++IS YV+ G     V   +   L   
Sbjct: 295 LVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNES 354

Query: 142 LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           ++P+  T+  +LKAC N+ D   G+++H  V+K        V  +L+ MY   G    AR
Sbjct: 355 IKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEAR 414

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++F+ +  R      +MIS   +  +A   LD        G+S    T AS++   A   
Sbjct: 415 RVFNQLYER------SMISCITEGRDA--PLDHRIGRMDMGISSS--TFASLISAAASVG 464

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  +H   +K G   + FVSN+L++MY++ G +  A R F+++ +R+V+SW S+I+
Sbjct: 465 MLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMIS 524

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
              +      A   F  M   G++P+ +T +++ S  + +   R  +     + R    +
Sbjct: 525 GLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLI 584

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
             +     +VD+ A+ G++  A      +P+K D + W TL+
Sbjct: 585 PRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLL 626



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 155/311 (49%), Gaps = 44/311 (14%)

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           + G   H   +   +++RD V  NS++  Y +     +A   F  M+  G++ D+++  +
Sbjct: 65  RLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMR--GLR-DIVSWTA 121

Query: 351 LTSIVAQLNDCRNSRSVHGFIM------------------------------------RR 374
           + S +A+    R S  + G ++                                    + 
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G +  D+ +G+A++DM A+ G + SA  VF+GL  K V+ W  LI+ Y Q   A EA+E+
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEI 241

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F    E +   P++ T  S++ A + +G++R G+++H+  ++     D  V+  LVDMY 
Sbjct: 242 FLDFLE-DGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYA 300

Query: 495 KCG---RIDDAMSLFYQVPRSSSVPWNAIISCHGIHG-QGDKALNFFRQMLDEGVRPDHI 550
           K      +D A  +F ++ ++  + W A+IS +   G Q +K +  F +ML+E ++P+HI
Sbjct: 301 KSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHI 360

Query: 551 TFVSLLTACSH 561
           T+ S+L AC++
Sbjct: 361 TYSSILKACAN 371



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 37/289 (12%)

Query: 48  IDFDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I +  + ++C  +      +++HA ++ S +         LV+ YA  G +  +R  F+ 
Sbjct: 360 ITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQ 419

Query: 105 ISYRNVYTWNSMISVYV---------RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
           +  R      SMIS            R GR+   +                 TF  ++ A
Sbjct: 420 LYER------SMISCITEGRDAPLDHRIGRMDMGISS--------------STFASLISA 459

Query: 156 CRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
             +   L  G+++H   LK GF  D FV+ SL+ MY R G    A + F+++  R+  SW
Sbjct: 460 AASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISW 519

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
            +MISG  + G A  AL +  +M L GV  + +T  ++L  C+    +  G      + +
Sbjct: 520 TSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQR 579

Query: 273 -HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            HGL   +     ++++ A+ G+++ AL   ++M ++ D + W +++ A
Sbjct: 580 DHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGA 628


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/762 (36%), Positives = 397/762 (52%), Gaps = 121/762 (15%)

Query: 59  KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           +L   +RL  L+      K V S   L++ YA  G +  +R  FD++  +N  +WN +++
Sbjct: 126 RLGDARRLFDLM----PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLA 181

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDV 178
            YV  GR+ EA                                     C + +   +WD+
Sbjct: 182 AYVHNGRIEEA-------------------------------------CLLFESKSDWDL 204

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
                L+  + R      AR LFD MPVRD+ SWN MISGY Q G   +A  + DE    
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE---- 260

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
                P                                 ++F    +++ Y + GM+  A
Sbjct: 261 ----SPTR-------------------------------DVFTWTAMVSGYVQNGMLDEA 285

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
              FD+M E++ VS+N++IA Y Q+     A   F +M                      
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP--------------------- 324

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
             CRN  S         W        N ++  Y ++G I  A   F+ +P +D +SW  +
Sbjct: 325 --CRNISS---------W--------NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I GYAQ+G   EA+ +F  +++  E + N+ T+   L   + + AL  G +IH + +K  
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGE-SLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
                FV   L+ MY KCG ID+A   F  +     V WN +++ +  HG G +AL  F 
Sbjct: 425 YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFE 484

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M   GV+PD IT V +L+ACSH+GL+  G  YF+ M +++G+ P  KHY CM+DL GRA
Sbjct: 485 SMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A + I+NMP +P A+ WGALLGA RIHGN ELG  A++ +F+++ +N G YVL+S
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLS 604

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+YA  G+W   D++RS  RD G++K PG+S +EV NK+  F  G+ +HP+ E+IY  L 
Sbjct: 605 NLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLE 664

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            L  KM+  GYV     VL DVEE+EKEH+L  HSE+LA+AFGI++ P   PI++ KNLR
Sbjct: 665 ELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLR 724

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           VC DCH+  K IS+I  R II+RDS+RFHHF +G CSCGDYW
Sbjct: 725 VCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 231/497 (46%), Gaps = 46/497 (9%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + +FS   ++  Y     L  +R  FD +  ++V +WNS++S Y + G + EA + F   
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIH--CSVLKLGFEWDVFVAASLLHMYCRFGLA 194
              + +     ++  +L A    V   +I   C + +   +WD+     L+  + R    
Sbjct: 169 PEKNSI-----SWNGLLAA---YVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKL 220

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA------ 248
             AR LFD MPVRD+ SWN MISGY Q G   +A  + DE     V      V+      
Sbjct: 221 GDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNG 280

Query: 249 ------SILPVCARSDNILSGLLIHLYIVKHGLEF--NLFVS---------NNLINMYAK 291
                 +        + +    +I  Y+    ++    LF S         N +I  Y +
Sbjct: 281 MLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQ 340

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A + FD M +RD VSW +IIA Y QS     A   F  ++Q G   +  T    
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            S  A +      + +HG  ++ G +     +GNA++ MY K G I+ A   FEG+  KD
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMG-YGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V+SWNT++ GYA++G   +A+ VF+ M+    + P++ T V +L A SH G L +G +  
Sbjct: 460 VVSWNTMLAGYARHGFGRQALTVFESMKTAG-VKPDEITMVGVLSACSHTGLLDRGTEYF 518

Query: 472 ARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGI 526
             + K+   + V       TC++D+ G+ GR+++A  L   +P +  +  W A++    I
Sbjct: 519 YSMTKD---YGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRI 575

Query: 527 HGQ---GDKALNFFRQM 540
           HG    G+KA     +M
Sbjct: 576 HGNTELGEKAAEMVFKM 592



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 205/461 (44%), Gaps = 28/461 (6%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLH----ALLVVSGKIKTVFS 81
           L +A  ++ +I   CL  ES+  D+D +  +C     V++        L     ++   S
Sbjct: 179 LLAAYVHNGRIEEACLLFESKS-DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS 237

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
              +++ YA  G LS +R  FD    R+V+TW +M+S YV+ G L EA   F +    + 
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE 297

Query: 142 LRPDF----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           +  +     Y     +   R L +   + C  +     W+  +       Y + G    A
Sbjct: 298 VSYNAMIAGYVQTKKMDIARELFE--SMPCRNIS---SWNTMITG-----YGQIGDIAQA 347

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           RK FD MP RD  SW A+I+GY QSG+  EAL++  E++ +G S++  T    L  CA  
Sbjct: 348 RKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADI 407

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  IH   VK G     FV N L+ MY K G +  A   F+ + E+DVVSWN+++
Sbjct: 408 AALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTML 467

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y +      A   F +M+ AG++PD +T+V + S  +              + +    
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIE 433
           +        ++D+  + G +  A  +   +P +    SW  L+     +G   L  +A E
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           +   ME       N G YV +   Y+  G      K+ +++
Sbjct: 588 MVFKMEP-----QNSGMYVLLSNLYAASGRWVDADKMRSKM 623



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 203/455 (44%), Gaps = 28/455 (6%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+      +  + R G  + A  +F+ MP R S S+NAMISGY ++     A ++ D+M 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              +    + +   +  C   D   +  L  L   K  + +     N+L++ YA+ G + 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGD---ARRLFDLMPEKDVVSW-----NSLLSGYAQNGYVD 159

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  VFD M E++ +SWN ++AAY  +     A   F +        DL++   L     
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFV 215

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           +     ++R +   +  R     D I  N ++  YA+ G ++ A  +F+  P +DV +W 
Sbjct: 216 RKKKLGDARWLFDKMPVR-----DAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +++GY QNG+  EA   F  M E NE+     +Y +++  Y       + + I   + +
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQT----KKMDIARELFE 321

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
           +  C ++     ++  YG+ G I  A   F  +P+   V W AII+ +   G  ++ALN 
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F ++  +G   +  TF   L+ C+    +  G++  H    + G          ++ ++ 
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAALELGKQ-IHGQAVKMGYGTGCFVGNALLAMYF 440

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           + G +  A++  + +  + D   W  +L     HG
Sbjct: 441 KCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARHG 474



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 76/368 (20%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N  I+ + + G    AL VF+ M  R  VS+N++I+ Y +++    A   F  M +    
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE---- 108

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
                                                D+   N ++  Y +   +  A  
Sbjct: 109 ------------------------------------RDLFSWNVMLTGYVRNCRLGDARR 132

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ +P KDV+SWN+L++GYAQNG   EA EVF  M E N I+ N      +L AY H G
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWN-----GLLAAYVHNG 187

Query: 463 ALRQGIKIHARVIKNCLCF------DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
                     R+ + CL F      D+    CL+  + +  ++ DA  LF ++P   ++ 
Sbjct: 188 ----------RIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAIS 237

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN +IS +   G     L+  R++ DE    D  T+ ++++    +G++ E + +F  M 
Sbjct: 238 WNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP 293

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           E+  +      Y  M+  + +   + +A    ++MP R + S W  +     I G  ++G
Sbjct: 294 EKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTM-----ITGYGQIG 342

Query: 637 AVASDRLF 644
            +A  R F
Sbjct: 343 DIAQARKF 350


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/678 (39%), Positives = 399/678 (58%), Gaps = 30/678 (4%)

Query: 158 NLVDGKKIHCS-VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           +L  G+ +H   VL        F+A  L+ MY        A +LF  MP R++ SW  ++
Sbjct: 185 DLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLV 244

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV------------CARSDNILSGL 264
           SG  Q+    +AL     MR  GV+     ++S                C  S ++    
Sbjct: 245 SGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASV---- 300

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
                    G +  LFV++NL +MY+K G++  A RVFDQM ++D V+W ++I  Y ++ 
Sbjct: 301 ---------GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 351

Query: 325 DPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
               A   F  M++ G +  D     S+ S    L D   S+S+H  + + G+ +E V +
Sbjct: 352 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE-VAV 410

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
            NA++DMYAK   + SA  V +  P   +V+S  ++I GY +     EA+ ++  +    
Sbjct: 411 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR-Q 469

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + PN+ T+ S++   +    L QG ++HA+VIK  L  D FV + LVDMYGKCG I  +
Sbjct: 470 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 529

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
           M LF ++   + + WNA+I+    HG G +A+  F +M+  G+RP+HI FVSLLTACSH+
Sbjct: 530 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 589

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV EG +YF+ M+E  GI+P  +HY C++D +GRAG L  A+ FI  MP++P+A  W +
Sbjct: 590 GLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCS 649

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LLGACR+ G+ ELG VA+  L +++  N G +V +S IYA++G+WE V  VR L RD  +
Sbjct: 650 LLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRI 709

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK PG+S ++ N K  +F + + +HP+ + IY++L  LT ++K  GY+PD SF+  ++E+
Sbjct: 710 KKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLED 769

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
             KE IL  HSER+A+AF +IS P   PI + KNLR+C DCH   KFI ++  R+IIVRD
Sbjct: 770 IAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRD 829

Query: 803 SNRFHHFKDGICSCGDYW 820
           ++RFHHF +G CSCGDYW
Sbjct: 830 NSRFHHFVNGRCSCGDYW 847



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 241/497 (48%), Gaps = 19/497 (3%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFD 103
           +    L QSC +   ++R   LHA LV+SG    + F +  L+  Y++  DL+ +   F 
Sbjct: 171 VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 230

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD-FYTFPPVLKACRNLVDG 162
            +  RN  +W +++S   +   +       +     +G+ P  F        A       
Sbjct: 231 AMPRRNAVSWTTLVSGLSQ-NLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPL 289

Query: 163 KKIHCSV-LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           +   C+    +GF+ ++FVA++L  MY + GL + A ++FD MP +D+ +W AMI GY +
Sbjct: 290 RARSCTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 349

Query: 222 SGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLL---IHLYIVKHGLEF 277
           +G+   A+    +M+ EG V  D     S+L     S  +  G L   IH  + K G E 
Sbjct: 350 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFEL 406

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            + V N LI+MYAK   +  A RV        +VVS  S+I  Y +++    A   +  +
Sbjct: 407 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 466

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           ++ G++P+  T  S+    A          +H  +++    + D  +G+ +VDMY K G+
Sbjct: 467 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD-LIRDSFVGSTLVDMYGKCGL 525

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I+ +  +F  +  +  I+WN +I  +AQ+G   EAI+ F  M     I PN   +VS+L 
Sbjct: 526 ISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG-IRPNHIAFVSLLT 584

Query: 457 AYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
           A SH G + +G+K  ++    + +       +C++D YG+ GR+D+A     ++P + ++
Sbjct: 585 ACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNA 644

Query: 515 VPWNAIISCHGIHGQGD 531
             W +++    + G  +
Sbjct: 645 YGWCSLLGACRMRGSKE 661



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 234/551 (42%), Gaps = 81/551 (14%)

Query: 158 NLVDGKKIHCS-VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           +L  G+ +H   VL        F+A  L+ MY        A +LF  MP R++ SW  ++
Sbjct: 35  DLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLV 94

Query: 217 SGYCQSGNAVEALDILDEMRLEGV-------------SMDP------------------- 244
           SG  Q+    +AL     MR  GV             ++ P                   
Sbjct: 95  SGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKY 154

Query: 245 ----------------ITVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLIN 287
                           + +AS+L  C R+ ++  G L+H  +V  G    + F++N+LI 
Sbjct: 155 WGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLIT 214

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL- 346
           MY+    +  ALR+F  M  R+ VSW ++++   Q+     A   F  M++AG+ P    
Sbjct: 215 MYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFA 274

Query: 347 -----TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
                   +      +   C  S SV         F  ++ + + + DMY+K G+++ AC
Sbjct: 275 LSSAARAAAALGAPLRARSCTASASVG--------FDTELFVASNLADMYSKCGLLSEAC 326

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+ +P KD ++W  +I GYA+NG    A+  F+ M+    +  +Q  + S+L A    
Sbjct: 327 RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA---S 383

Query: 462 GALRQG---IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           G L+ G     IH  V K     +V V   L+DMY K   ++ A  +    P      WN
Sbjct: 384 GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGG----WN 439

Query: 519 AIISCHGIHGQ-----GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            +     I G       ++AL  + ++  +GV P+  TF S++  C+   L+ +G +   
Sbjct: 440 VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 499

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            + +   I+        +VD++G+ G + ++      +  R D + W A++     HG+ 
Sbjct: 500 QVIKTDLIRDSFVG-STLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHG 557

Query: 634 ELGAVASDRLF 644
                A DR+ 
Sbjct: 558 REAIQAFDRMI 568



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 187/401 (46%), Gaps = 31/401 (7%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           +F ++ L + Y+  G LS +   FD +  ++   W +MI  Y + G L  AV  F     
Sbjct: 306 LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKR 365

Query: 139 TSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
              +  D + F  VL A   L DG   K IHC V K GFE +V V  +L+ MY +     
Sbjct: 366 EGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVE 425

Query: 196 VARKLFDDMPVRDSGSWN-----AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            A ++       D G WN     +MI GY ++    EAL I  E+R +GV  +  T +S+
Sbjct: 426 SASRVLKI----DPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSM 481

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           +  CA    +  G  +H  ++K  L  + FV + L++MY K G++  ++++F+++  R  
Sbjct: 482 IKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD 541

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ-------LNDCRN 363
           ++WN++I  + Q      A   F  M  +GI+P+ +  VSL +  +        L    +
Sbjct: 542 IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYS 601

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGY 422
            +  HG   +   +       + ++D Y + G ++ A      +P+K +   W +L+   
Sbjct: 602 MKEAHGIEPKEEHY-------SCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGAC 654

Query: 423 AQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
              G + E  EV    +   ++ P N G +VS+   Y+ +G
Sbjct: 655 RMRG-SKELGEV--AAQNLMKLEPGNTGIHVSLSGIYASLG 692



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 198/462 (42%), Gaps = 66/462 (14%)

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFD 303
           + +AS+L  C R+ ++  G L+H  +V  G    + F++N+LI MY+    +  ALR+F 
Sbjct: 21  VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT---------------- 347
            M  R+ VSW ++++   Q+     A   F  M++AG+ P  L                 
Sbjct: 81  AMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLA 140

Query: 348 --------------------------------LVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
                                           L SL     +  D R  R +H  ++  G
Sbjct: 141 ASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSG 200

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
                  + N ++ MY+    + SA  +F  +P ++ +SW TL++G +QN + ++A+  F
Sbjct: 201 AAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAF 260

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVDMY 493
             M     + P   T  ++  A     AL   ++  +      + FD  +FVA+ L DMY
Sbjct: 261 AAMRRAG-VAP---TRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMY 316

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITF 552
            KCG + +A  +F Q+P+  +V W A+I  +  +G  + A+  FR M  EG V  D   F
Sbjct: 317 SKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVF 376

Query: 553 VSLLTACSHSGLVSEG--QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
            S+L+A   SG + +G   +  H    + G +  +     ++D++ ++  +  A   +  
Sbjct: 377 CSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL-- 431

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
              + D   W  + G   I G +E   V    +  V+    G
Sbjct: 432 ---KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 470



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)

Query: 36  ISPDCLEN-------------ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTV 79
           I  DC+E              E  E  F  + + C     L    +LHA ++ +  I+  
Sbjct: 451 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 510

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F  + LV+ Y   G +S S   F+ I YR    WN++I+V+ + G   EA+  F +  + 
Sbjct: 511 FVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM-IY 569

Query: 140 SGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLAN 195
           SG+RP+   F  +L AC +  LVD G K   S+ +  G E      + ++  Y R G  +
Sbjct: 570 SGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLD 629

Query: 196 VARKLFDDMPVRDSG-SWNAMISGYCQSGNAVEALDILDE--MRLE 238
            A K   +MP++ +   W +++ G C+   + E  ++  +  M+LE
Sbjct: 630 EAYKFISEMPIKPNAYGWCSLL-GACRMRGSKELGEVAAQNLMKLE 674


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 278/787 (35%), Positives = 423/787 (53%), Gaps = 18/787 (2%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + +  L Q  T+   L H K  H  ++ +     +F    L+  Y   G+   ++  FD 
Sbjct: 20  VTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDR 79

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD--- 161
           +  RNV +WNS+IS Y + G   E ++ F +  + S LR D +TF   L  C   +D   
Sbjct: 80  MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFSNALSVCGRTLDLRL 138

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+ IH  +   G    V +  SL+ MYC+ G  + AR +F+     DS SWN++I+GY +
Sbjct: 139 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 198

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNL 279
            G+  E L +L +M   G++++   + S L  C    S +I  G ++H   VK GL+ ++
Sbjct: 199 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 258

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPIT--AHGFFT 334
            V   L++ YAK G +  A ++F  M + +VV +N++IA +   E   D     A   F 
Sbjct: 259 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 318

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            MQ  G++P   T  S+    + +      + +H  I +      D  IGNA+V++Y+  
Sbjct: 319 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYN-LQSDEFIGNALVELYSLS 377

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I      F   P  DV+SW +LI G+ QNG     + +F  +       P++ T   +
Sbjct: 378 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR-KPDEFTISIM 436

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A +++ A++ G +IHA  IK  +     +    + MY KCG ID A   F +      
Sbjct: 437 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDI 496

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W+ +IS +  HG   +A++ F  M   G+ P+HITF+ +L ACSH GLV EG RYF +
Sbjct: 497 VSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEI 556

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M+++ GI P++KH  C+VDL GRAG L  A +FI +     D  +W +LL ACR+H   +
Sbjct: 557 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 616

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
            G   ++R+ E++ E    YVL+ NIY + G      E+R+L +DRG+KK PG S IEV 
Sbjct: 617 TGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVG 676

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS-HS 753
           N V  F  G+R+HP  + IY +L  +  ++K L Y+ D+  V    E   K++ + S HS
Sbjct: 677 NVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHS 735

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LA+ FGIIS P  +P+++ KNLR C  CH   K  S++  REII+RD  RFH F+DG 
Sbjct: 736 EKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGS 795

Query: 814 CSCGDYW 820
           CSCGDYW
Sbjct: 796 CSCGDYW 802



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 215/452 (47%), Gaps = 12/452 (2%)

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G+ +D +T   ++    R+ +++ G L H++++K   +  LF+ NNL+ MY K G    A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            ++FD+M +R+VVSWNS+I+ Y Q          F   + + ++ D  T  +  S+  + 
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D R  R +H  I   G     V++ N+++DMY K G I+ A  VFE     D +SWN+L
Sbjct: 134 LDLRLGRLIHALITVSG-LGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA--YSHVGALRQGIKIHARVIK 476
           I GY + G   E + +   M   + +N N     S L A   +   ++  G  +H   +K
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLR-HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVK 251

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH-GIHGQGD---- 531
             L  DV V T L+D Y K G ++DA  +F  +P  + V +NA+I+    +    D    
Sbjct: 252 LGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFAN 311

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +M   G++P   TF S+L ACS       G++  H    ++ ++        +
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQ-IHAQIFKYNLQSDEFIGNAL 370

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG-AVASDRLFEVDSEN 650
           V+L+  +G +        + P + D   W +L+     +G  E G  +  + LF     +
Sbjct: 371 VELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
                +M +  AN+   +  +++ + A   G+
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGI 461


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/572 (40%), Positives = 354/572 (61%), Gaps = 3/572 (0%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S + +  R  N+     +H ++V +G   +L ++N L+  YA+   +  A  +FD +  R
Sbjct: 5   SCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMR 64

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           D  +W+ ++  + ++ D    +  F  + + G+ PD  TL  +        D +  R +H
Sbjct: 65  DSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIH 124

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             +++ G  + D  +  ++VDMYAK  ++  A  +FE +  KD+++W  +I  YA    A
Sbjct: 125 DVVLKHG-LLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-A 182

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            E++ +F  M E   + P++   V+++ A + +GA+ +    +  +++N    DV + T 
Sbjct: 183 YESLVLFDRMRE-EGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTA 241

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           ++DMY KCG ++ A  +F ++   + + W+A+I+ +G HG+G  A++ F  ML   + P+
Sbjct: 242 MIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPN 301

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            +TFVSLL ACSH+GL+ EG R+F+ M EE  ++P +KHY CMVDL GRAG L  A   I
Sbjct: 302 RVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLI 361

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           + M V  D  +W ALLGACRIH  MEL   A++ L E+  +N G+YVL+SNIYA  GKWE
Sbjct: 362 EAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWE 421

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V + R +   R LKK PGW+ IEV+NK   F  G+R+HP+ ++IY+ L +L  K++  G
Sbjct: 422 KVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAG 481

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVPD  FVLQDVEE+ K+ +L +HSE+LAIAFG+I+ P   PI+I KNLRVCGDCH ++K
Sbjct: 482 YVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSK 541

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +S I  R IIVRD+NRFHHF DG CSCGDYW
Sbjct: 542 MVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 231/412 (56%), Gaps = 10/412 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           +L  CRN+   +++H  V+  G   D+ +A  LL+ Y +    + A  LFD + +RDS +
Sbjct: 9   LLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKT 68

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           W+ M+ G+ ++G+         E+   GV+ D  T+  ++  C    ++  G +IH  ++
Sbjct: 69  WSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVL 128

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           KHGL  + FV  +L++MYAK  ++  A R+F++M+ +D+V+W  +I AY   N    +  
Sbjct: 129 KHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYESLV 187

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  M++ G+ PD + +V++ +  A+L     +R  + +I+R G F  DVI+G A++DMY
Sbjct: 188 LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNG-FSLDVILGTAMIDMY 246

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G + SA  VF+ +  K+VISW+ +I  Y  +G   +AI++F MM  C  I PN+ T+
Sbjct: 247 AKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSC-AILPNRVTF 305

Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           VS+L A SH G + +G++  ++   ++ +  DV   TC+VD+ G+ GR+D+A+ L   + 
Sbjct: 306 VSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMT 365

Query: 511 -RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTA 558
                  W+A++    IH +    +KA N   ++  +   P H   +S + A
Sbjct: 366 VEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQN--PGHYVLLSNIYA 415



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 205/421 (48%), Gaps = 20/421 (4%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL   C  + H++++HA +V +G ++ +  + KL+  YA    +  +   FD ++ R+  
Sbjct: 8   DLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSK 67

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           TW+ M+  + + G   +   C+  F   L  G+ PD YT P V++ CR+  D   G+ IH
Sbjct: 68  TWSVMVGGFAKAG---DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIH 124

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             VLK G   D FV ASL+ MY +  +   A++LF+ M  +D  +W  MI  Y    NA 
Sbjct: 125 DVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC-NAY 183

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           E+L + D MR EGV  D + + +++  CA+   +      + YIV++G   ++ +   +I
Sbjct: 184 ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMI 243

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MYAK G +  A  VFD+M E++V+SW+++IAAY        A   F  M    I P+ +
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T VSL    +              +        DV     +VD+  + G ++ A  + E 
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEA 363

Query: 407 LPV-KDVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHV 461
           + V KD   W+ L+     +++  LA +A           E+ P N G YV +   Y+  
Sbjct: 364 MTVEKDERLWSALLGACRIHSKMELAEKAANSLL------ELQPQNPGHYVLLSNIYAKA 417

Query: 462 G 462
           G
Sbjct: 418 G 418


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 285/778 (36%), Positives = 425/778 (54%), Gaps = 17/778 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKI-KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           L + C  +   K LH+ +  S  + +  + ++ LV  Y   G L  +   F  I+++++ 
Sbjct: 35  LVRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIV 94

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCS 168
            W  +IS YV  G  + A+  F++  L  G+  D   F  VL AC +   L  G+ IH  
Sbjct: 95  LWTVLISAYVSRGHSAAAIALFHRI-LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRC 153

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVE 227
            ++ G      VA++L+ MY R G    A  LF  +    D   WNAMI+   Q+G+  E
Sbjct: 154 AVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPRE 213

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNL 285
           AL+I   M   G+  D +T  S+   C+ S ++ +  +   H  + + GL  ++ V+  L
Sbjct: 214 ALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATAL 273

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +N YA+ G +  A + F +M ER+ VSW S+IAA+ Q    +    F   + + G+ P  
Sbjct: 274 VNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLLAVETFHAMLLE-GVVP-- 330

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T  +L + +    D R +R V       G  + DV I   +V  YA+      A  VF 
Sbjct: 331 -TRSTLFAALEGCEDLRVARLVEAIAQEIG-VVTDVAIVTDLVMAYARCDGQEDAIRVFS 388

Query: 406 GLPVK--DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
                  D      +I  YAQ        +++    E   I+P++  Y++ L A + + A
Sbjct: 389 AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIE-RGISPDRILYITALDACASLAA 447

Query: 464 LRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           L +G +IHA V  +  L  DV +   +V MYG+CG + DA   F  +P    + WNA++S
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
               HG+ +   + FR ML EG   + I F++LL+AC+H+GLV  G  +F  M  + G+ 
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVV 567

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HYGCMVDL GR G L  AH  +Q MPV PDA+ W AL+GACRI+G+ E G  A++R
Sbjct: 568 PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAER 627

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + E+ +++   YV + NIY+  G+W+    VR +  D GL+K PG SSIE+ +KV  F  
Sbjct: 628 VLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVV 687

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
            +R+HP+ E IY EL  +   ++  GY      VL DVEE++KE +L  HSE+LAIAFG+
Sbjct: 688 RDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGM 747

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S+P  S +++ KNLRVC DCHN +KFIS++  REI+VRD  RFHHFKDG CSCGDYW
Sbjct: 748 MSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 375/593 (63%), Gaps = 4/593 (0%)

Query: 230  DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            + L EM ++G+ ++     S+L  C     I  G  +H +++K   E  +++   LI +Y
Sbjct: 463  EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522

Query: 290  AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
             K   +  A RV D+M ER+VVSW ++I+ Y Q      A   F  M  +G  P+  T  
Sbjct: 523  NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582

Query: 350  SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            ++ +     +  +  R +H  +++   F   + +G++++DMYAK G I  A  VF+GLP 
Sbjct: 583  TVLTSCTSSSGFQLGRQIHSLVIKTS-FESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641

Query: 410  KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            +DV+S   +I+GYAQ GL  EA+++F+ ++    +  N  TY S+L A S + AL  G +
Sbjct: 642  RDVVSCTAIISGYAQLGLDEEALDLFRRLQR-EGMRSNYVTYASVLTALSGLAALDHGRQ 700

Query: 470  IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
            +H+ V++  L F V +   L+DMY KCG +  +  +F  +P  + + WNA++  +  HG 
Sbjct: 701  VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760

Query: 530  GDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKH 587
            G +A+  F+ M +E  V+PD +TF+++L+ CSH G+   G + ++ M+ ++ G +P ++H
Sbjct: 761  GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 820

Query: 588  YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
            YGC+VDLFGRAG +  A  FI+ MP  P A+IWG+LLGACR+H N+ +G   + RL E++
Sbjct: 821  YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 880

Query: 648  SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            SEN G YV++SN+YA+ G+W+ V  VR L +++ + K PG S IE++  +  F+  +R+H
Sbjct: 881  SENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSH 940

Query: 708  PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
            P+ E+++ ++R L+ K+K  GYVP+ S VL DV++++KE IL  HSE+LA+AFG+I +P 
Sbjct: 941  PRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPG 1000

Query: 768  KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             +P++I KNLR+C DCHN+ KF+S++  RE+ +RD NRFHH   G CSCGDYW
Sbjct: 1001 GTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 225/393 (57%), Gaps = 7/393 (1%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           GL  +F  +  VL  C     + +G+++H  ++K  +E  V++   L+ +Y +      A
Sbjct: 472 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 531

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++ D+MP R+  SW AMISGY Q G A EAL +  EM + G + +  T A++L  C  S
Sbjct: 532 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 591

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
                G  IH  ++K   E ++FV ++L++MYAK G +  A RVFD + ERDVVS  +II
Sbjct: 592 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 651

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           + Y Q      A   F  +Q+ G++ + +T  S+ + ++ L    + R VH  ++R    
Sbjct: 652 SGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 711

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
              V++ N+++DMY+K G +  +  +F+ +P + VISWN ++ GY+++GL  EA+E+F++
Sbjct: 712 FY-VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 770

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGK 495
           M+E N++ P+  T++++L   SH G   +G++I   ++     F+  +    C+VD++G+
Sbjct: 771 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 830

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            GR+++A     ++P   ++  W +++    +H
Sbjct: 831 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 234/464 (50%), Gaps = 23/464 (4%)

Query: 16  LLPLLQAHRPLFSAAANSLQISPDCLEN--ESREIDF---DDLFQSC---TKLHHVKRLH 67
           LL    A+ P      ++ Q+    LE   +  E++F   D +   C   T +   +R+H
Sbjct: 441 LLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVH 500

Query: 68  ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           A ++ +     V+  T+L+  Y     L  +R   D +  RNV +W +MIS Y + G  S
Sbjct: 501 AHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYAS 560

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASL 184
           EA+  F +  L SG  P+ +TF  VL +C +      G++IH  V+K  FE  +FV +SL
Sbjct: 561 EALHLFVEM-LMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSL 619

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           L MY + G    AR++FD +P RD  S  A+ISGY Q G   EALD+   ++ EG+  + 
Sbjct: 620 LDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 679

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +T AS+L   +    +  G  +H ++++  L F + + N+LI+MY+K G + ++ R+FD 
Sbjct: 680 VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDS 739

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQ--LNDC 361
           M ER V+SWN+++  Y +      A   F  M++   ++PD +T +++ S  +   + D 
Sbjct: 740 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMED- 798

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLIT 420
           R     +  + ++  F  ++     VVD++ + G +  A    + +P +   + W +L+ 
Sbjct: 799 RGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 858

Query: 421 G--YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
                QN    E +   +++E  +E   N G YV +   Y+  G
Sbjct: 859 ACRVHQNVHIGEFV-ARRLLEIESE---NAGNYVILSNLYASAG 898


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/619 (41%), Positives = 383/619 (61%), Gaps = 4/619 (0%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           MP R++ SW  ++SG  Q+    +AL     MR  GV+     ++S     A     L G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +H   V+ G +  LFV++NL +MY+K G++  A RVFDQM ++D V+W ++I  Y ++
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 324 NDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                A   F  M++ G +  D     S+ S    L D   S+S+H  + + G+ +E V 
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE-VA 179

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           + NA++DMYAK   + SA  V +  P   +V+S  ++I GY +     EA+ ++  +   
Sbjct: 180 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR- 238

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN+ T+ S++   +    L QG ++HA+VIK  L  D FV + LVDMYGKCG I  
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 298

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           +M LF ++   + + WNA+I+    HG G +A+  F +M+  G+RP+HI FVSLLTACSH
Sbjct: 299 SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSH 358

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +GLV EG +YF+ M+E  GI+P  +HY C++D +GRAG L  A+ FI  MP++P+A  W 
Sbjct: 359 AGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWC 418

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           +LLGACR+ G+ ELG VA+  L +++  N G +V +S IYA++G+WE V  VR L RD  
Sbjct: 419 SLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSR 478

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +KK PG+S ++ N K  +F + + +HP+ + IY++L  LT ++K  GY+PD SF+  ++E
Sbjct: 479 IKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLE 538

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           +  KE IL  HSER+A+AF +IS P   PI + KNLR+C DCH   KFI ++  R+IIVR
Sbjct: 539 DIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVR 598

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D++RFHHF +G CSCGDYW
Sbjct: 599 DNSRFHHFVNGRCSCGDYW 617



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 196/375 (52%), Gaps = 12/375 (3%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++HC  ++LGF+ ++FVA++L  MY + GL + A ++FD MP +D+ +W AMI GY ++G
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 224 NAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLL---IHLYIVKHGLEFNL 279
           +   A+    +M+ EG V  D     S+L     S  +  G L   IH  + K G E  +
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEV 178

Query: 280 FVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            V N LI+MYAK   +  A RV        +VVS  S+I  Y +++    A   +  +++
Sbjct: 179 AVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 238

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G++P+  T  S+    A          +H  +++    + D  +G+ +VDMY K G+I+
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD-LIRDSFVGSTLVDMYGKCGLIS 297

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            +  +F  +  +  I+WN +I  +AQ+G   EAI+ F  M     I PN   +VS+L A 
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG-IRPNHIAFVSLLTAC 356

Query: 459 SHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
           SH G + +G+K  ++    + +       +C++D YG+ GR+D+A     ++P + ++  
Sbjct: 357 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 416

Query: 517 WNAIISCHGIHGQGD 531
           W +++    + G  +
Sbjct: 417 WCSLLGACRMRGSKE 431



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 31/415 (7%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH + V  G    +F ++ L + Y+  G LS +   FD +  ++   W +MI  Y + G
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVA 181
            L  AV  F        +  D + F  VL A   L DG   K IHC V K GFE +V V 
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 181

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWN-----AMISGYCQSGNAVEALDILDEMR 236
            +L+ MY +      A ++       D G WN     +MI GY ++    EAL I  E+R
Sbjct: 182 NALIDMYAKSMDVESASRVLKI----DPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 237

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            +GV  +  T +S++  CA    +  G  +H  ++K  L  + FV + L++MY K G++ 
Sbjct: 238 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            ++++F+++  R  ++WN++I  + Q      A   F  M  +GI+P+ +  VSL +  +
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 357

Query: 357 Q-------LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                   L    + +  HG   +   +       + ++D Y + G ++ A      +P+
Sbjct: 358 HAGLVDEGLKYFYSMKEAHGIEPKEEHY-------SCIIDTYGRAGRLDEAYKFISEMPI 410

Query: 410 K-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           K +   W +L+      G + E  EV    +   ++ P N G +VS+   Y+ +G
Sbjct: 411 KPNAYGWCSLLGACRMRG-SKELGEV--AAQNLMKLEPGNTGIHVSLSGIYASLG 462



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 25/226 (11%)

Query: 36  ISPDCLEN-------------ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTV 79
           I  DC+E              E  E  F  + + C     L    +LHA ++ +  I+  
Sbjct: 221 IETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 280

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F  + LV+ Y   G +S S   F+ I YR    WN++I+V+ + G   EA+  F +  + 
Sbjct: 281 FVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM-IY 339

Query: 140 SGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLAN 195
           SG+RP+   F  +L AC +  LVD G K   S+ +  G E      + ++  Y R G  +
Sbjct: 340 SGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLD 399

Query: 196 VARKLFDDMPVRDSG-SWNAMISGYCQSGNAVEALDILDE--MRLE 238
            A K   +MP++ +   W +++ G C+   + E  ++  +  M+LE
Sbjct: 400 EAYKFISEMPIKPNAYGWCSLL-GACRMRGSKELGEVAAQNLMKLE 444


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/615 (40%), Positives = 367/615 (59%), Gaps = 10/615 (1%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           S N +I   C+ G   +AL +L +      S    T   ++  C    ++  GL +H +I
Sbjct: 48  SNNQLIQSLCKEGKLKQALRVLSQES----SPSQQTYELLILCCGHRSSLSDGLRVHRHI 103

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           + +G + + F++  LI MY+  G + +A +VFD+  +R +  WN++  A   +       
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163

Query: 331 GFFTTMQQAGIQPDLLTLV-SLTSIVAQ---LNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
           G +  M + G++ D  T    L + VA     +     + +H  + RRG +   V I   
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRG-YNSHVYIMTT 222

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEIN 445
           +VDMYA+ G ++ A  VF G+PV++V+SW+ +I  YA+NG A EA+  F +MM E  + +
Sbjct: 223 LVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS 282

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN  T VS+L A + + AL QG  IH  +++  L   + V + LV MYG+CG++D    +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRV 342

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++     V WN++IS +G+HG G KA+  F +ML  G  P  +TFVS+L ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG+R F  M  + GIKP ++HY CMVDL GRA  L  A   +Q+M   P   +WG+LLG
Sbjct: 403 EEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           +CRIHGN+EL   AS RLF ++ +N G YVL+++IYA    W+ V  V+ L   RGL+K 
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PG   +EV  K+  F + +  +P  E+I+  L  L   MK  GY+P    VL ++E +EK
Sbjct: 523 PGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           E I+  HSE+LA+AFG+I++    PI+I KNLR+C DCH +TKFIS+  E+EI+VRD NR
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNR 642

Query: 806 FHHFKDGICSCGDYW 820
           FH FK+G+CSCGDYW
Sbjct: 643 FHRFKNGVCSCGDYW 657



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 227/441 (51%), Gaps = 22/441 (4%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           N +I    + G+L +A+    Q +      P   T+  ++  C    +L DG ++H  +L
Sbjct: 50  NQLIQSLCKEGKLKQALRVLSQES-----SPSQQTYELLILCCGHRSSLSDGLRVHRHIL 104

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
             G + D F+A  L+ MY   G  + ARK+FD    R    WNA+      +G+  E L 
Sbjct: 105 DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164

Query: 231 ILDEMRLEGVSMDPITVASILPVCARS----DNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +  +M   GV  D  T   +L  C  S    D++  G  IH ++ + G   ++++   L+
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLV 224

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPD 344
           +MYA+FG + +A  VF+ M  R+VVSW+++IA Y ++     A   F  M  +     P+
Sbjct: 225 DMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPN 284

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAV 403
            +T+VS+    A L      R +HG+I+RRG  ++ ++ + +A+V MY + G ++    V
Sbjct: 285 SVTMVSVLQACASLAALEQGRLIHGYILRRG--LDSILPVISALVTMYGRCGKLDVGQRV 342

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +  +DV+SWN+LI+ Y  +G   +AI++F+ M   N  +P   T+VS+L A SH G 
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEM-LANGASPTPVTFVSVLGACSHEGL 401

Query: 464 LRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP--WNAI 520
           + +G ++   + ++  +   V    C+VD+ G+  R+D+A  +  Q  R+   P  W ++
Sbjct: 402 VEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMV-QDMRTEPGPKVWGSL 460

Query: 521 ISCHGIHGQGDKALNFFRQML 541
           +    IHG  + A    R++ 
Sbjct: 461 LGSCRIHGNVELAERASRRLF 481



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 178/351 (50%), Gaps = 26/351 (7%)

Query: 13  LCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSC---TKLHHVKRLHAL 69
           LCK   L QA R L   ++ S Q              ++ L   C   + L    R+H  
Sbjct: 56  LCKEGKLKQALRVLSQESSPSQQT-------------YELLILCCGHRSSLSDGLRVHRH 102

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           ++ +G  +  F +TKL+  Y++LG + ++R  FD    R +Y WN++       G   E 
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKAC-------RNLVDGKKIHCSVLKLGFEWDVFVAA 182
           +  +++     G+  D +T+  VLKAC        +L  GK+IH  + + G+   V++  
Sbjct: 163 LGLYWKMNRI-GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMT 221

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+ MY RFG  + A  +F+ MPVR+  SW+AMI+ Y ++G A EAL    EM  E    
Sbjct: 222 TLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDS 281

Query: 243 DP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            P  +T+ S+L  CA    +  G LIH YI++ GL+  L V + L+ MY + G +    R
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQR 341

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           VFD+M +RDVVSWNS+I++Y        A   F  M   G  P  +T VS+
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSV 392



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 8/271 (2%)

Query: 57  CTKLHHVK--RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           CT  H  K   +HA L   G    V+  T LV+ YA  G + ++ + F+ +  RNV +W+
Sbjct: 193 CTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWS 252

Query: 115 SMISVYVRCGRLSEAVDCFYQF-TLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVL 170
           +MI+ Y + G+  EA+  F +  T T    P+  T   VL+AC +L     G+ IH  +L
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYIL 312

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           + G +  + V ++L+ MY R G  +V +++FD M  RD  SWN++IS Y   G   +A+ 
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQ 372

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMY 289
           I +EM   G S  P+T  S+L  C+    +  G  L       HG++  +     ++++ 
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLL 432

Query: 290 AKFGMMRHALR-VFDQMMERDVVSWNSIIAA 319
            +   +  A + V D   E     W S++ +
Sbjct: 433 GRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 10/209 (4%)

Query: 27  FSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSST 83
           F A     ++  +  ++    +    + Q+C  L  +++   +H  ++  G    +   +
Sbjct: 265 FEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVIS 324

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
            LV  Y   G L   +  FD +  R+V +WNS+IS Y   G   +A+  F +  L +G  
Sbjct: 325 ALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEM-LANGAS 383

Query: 144 PDFYTFPPVLKACRN---LVDGKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARK 199
           P   TF  VL AC +   + +GK++  S+ +  G +  V   A ++ +  R    + A K
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAK 443

Query: 200 LFDDMPVRDSGS-WNAMISGYCQSGNAVE 227
           +  DM        W +++ G C+    VE
Sbjct: 444 MVQDMRTEPGPKVWGSLL-GSCRIHGNVE 471


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/753 (35%), Positives = 426/753 (56%), Gaps = 15/753 (1%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAV-DCFYQFTL 138
           F    LV+ Y   G +  +   F+ ++ RN+ +WN++++      R  E   DC      
Sbjct: 100 FVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGG 159

Query: 139 TSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
           T+   PD  T   VL  C  L     G+ +H   +K G++    V+  L+ MY + G   
Sbjct: 160 TAA--PDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMA 217

Query: 196 VARKLFDDMPV---RDSGSWNAMISGYCQSGNAVEALDILDEMRLE--GVSMDPITVASI 250
            A   F + P    R+  SWN M+ GY ++G A  A  +L EM++E  GV  D IT+ S+
Sbjct: 218 DAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSV 277

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNL-FVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           LPVC+    +     +H ++V+ GL      V N LI  Y + G + HA RVFD +  + 
Sbjct: 278 LPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKM 337

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           V SWN++I A+ Q+ +   A   F  M  A G +PD  ++ SL      L    + ++ H
Sbjct: 338 VSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAH 397

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
           GFI+R G   +D  I  +++ +Y + G  + A  +F+ +  KD +SWNT+I GY+QNGL 
Sbjct: 398 GFILRNG-LEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLP 456

Query: 429 SEAIEVFQMMEECNEIN-PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
            E++++F+ M+     + P+     S L A S + A+R G ++H   +K  LC D F+++
Sbjct: 457 GESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSS 516

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            ++DMY KCG +DDA   F ++    +V W  +I+ + ++G+G +A+  + +M  EG+ P
Sbjct: 517 SIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEP 576

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           D  T++ LL AC H+G++ +G  +F  M+    I+  L+HY C++ +  RAG    A   
Sbjct: 577 DGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVAL 636

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           ++ MP  PDA I  ++L AC +HG +ELG   +D+L E++     +YVL SN+YA   +W
Sbjct: 637 MEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQW 696

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           + + +VR + RD G+ K PG S I++  KV  F  G  + P+  K+     +L  K+++ 
Sbjct: 697 DEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAA 756

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GY PD + +L ++EE+EK   L  HSE+ AIAFG++ +   + +++FKN+R+C DCHN  
Sbjct: 757 GYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAA 816

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K IS++ +REI+VRD  RFHHF+DG+CSCGDYW
Sbjct: 817 KLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 172/559 (30%), Positives = 277/559 (49%), Gaps = 24/559 (4%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
           WN +++   R GR ++A+    +    S G+ PD +T PP LK+CR   DG+++H    K
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG-DDGRQVHAVAAK 91

Query: 172 LGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL- 229
           LG  + D FV  SL+ MY R G  + A K+F+ M  R+  SWNA+++        +E   
Sbjct: 92  LGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFR 151

Query: 230 DILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           D L++  L G +  D  T+ ++LP+CA      +G  +H   VK G +    VSN L++M
Sbjct: 152 DCLED--LGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDM 209

Query: 289 YAKFGMMRHALRVFDQM---MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ--QAGIQP 343
           YAK G M  A   F +      R+VVSWN ++  Y ++ +   A G    MQ  + G+  
Sbjct: 210 YAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPA 269

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T++S+  + + L +    R +H F++RRG  +   ++ NA++  Y + G +  AC V
Sbjct: 270 DEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRV 329

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+G+  K V SWN LI  +AQNG AS AIE+F+ M       P+  +  S+L A  ++  
Sbjct: 330 FDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKH 389

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G   H  +++N L  D F+   L+ +Y +CGR   A  LF  V     V WN +I+ 
Sbjct: 390 LLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAG 449

Query: 524 HGIHGQGDKALNFFRQMLDE--GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           +  +G   ++L  FR+M  +  G  P  +   S L ACS    V  G+   H     F +
Sbjct: 450 YSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKE-MHC----FAL 504

Query: 582 KPHLKH----YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           K  L         ++D++ + G +  A  F   +  + DA  W  ++    ++G  +   
Sbjct: 505 KADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAK-DAVSWTVMITGYAVNGRGKEAV 563

Query: 638 VASDRLFEVDSENVGYYVL 656
              D++     E  G+  L
Sbjct: 564 GLYDKMGREGMEPDGFTYL 582



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 167/614 (27%), Positives = 283/614 (46%), Gaps = 38/614 (6%)

Query: 26  LFSAAAN---SLQISPDCLEN-----ESREIDFDDLFQSCTKL---HHVKRLHALLVVSG 74
           L +A A+    L++  DCLE+        E     +   C  L      + +H L V SG
Sbjct: 136 LMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSG 195

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI---SYRNVYTWNSMISVYVRCGRLSEAVD 131
                  S  LV+ YA  G+++ +   F      + RNV +WN M+  Y R G    A  
Sbjct: 196 WDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFG 255

Query: 132 CFYQFTLTS-GLRPDFYTFPPVLKACRNLVDGKK---IHCSVLKLGFEWDV-FVAASLLH 186
              +  +   G+  D  T   VL  C  L +  K   +H  V++ G       V  +L+ 
Sbjct: 256 LLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIA 315

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPI 245
            Y R G    A ++FD +  +   SWNA+I  + Q+G A  A+++  EM    G   D  
Sbjct: 316 AYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWF 375

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           ++ S+L  C    ++L G   H +I+++GLE + F+  +L+++Y + G    A  +FD +
Sbjct: 376 SIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAV 435

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ--QAGIQPDLLTLVSLTSIVAQLNDCRN 363
            E+D VSWN++IA Y Q+  P  +   F  MQ  + G  P LL   S     ++L   R 
Sbjct: 436 EEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRL 495

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + +H F ++     ED  + ++++DMY+K G ++ A   F+ L  KD +SW  +ITGYA
Sbjct: 496 GKEMHCFALKAD-LCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYA 554

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            NG   EA+ ++  M     + P+  TY+ +L A  H G L  G+    + ++N    + 
Sbjct: 555 VNGRGKEAVGLYDKMGR-EGMEPDGFTYLGLLMACGHAGMLEDGLCFF-QEMRNLPKIEA 612

Query: 484 FVA--TCLVDMYGKCGRIDDAMSLFYQVPRS--SSVPWNAIISCHGIHGQGDKALNFFRQ 539
            +    C++ M  + GR  DA++L   +P    + +  + + +CH +HG+ +       +
Sbjct: 613 KLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACH-MHGEVELGKKVADK 671

Query: 540 MLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC-MVDLFGR 597
           +L+ E  + +H    S + A S      +  R    M  + G+    K  GC  +D+ G+
Sbjct: 672 LLELEPHKAEHYVLASNMYAGSRQ---WDEMRKVRKMLRDAGVA---KEPGCSWIDIAGK 725

Query: 598 AGHLGMAHNFIQNM 611
                   N +  M
Sbjct: 726 VYSFVAGENSLPEM 739


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 270/705 (38%), Positives = 392/705 (55%), Gaps = 38/705 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH---MYCRFGLANVARKLFDDMPVRD 208
           +L  C+ L   + IH  ++K G     +  + LL    +   F     A  +FD +    
Sbjct: 8   LLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPX 67

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN M  G+  S + V AL +   M   G+  +  T   +L  CA+S     G  +H 
Sbjct: 68  LLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHG 127

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV--------------------------- 301
            ++K G + +L++  +LI+MY + G +  A +V                           
Sbjct: 128 QVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIES 187

Query: 302 ----FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
               FD++  +DVVSWN+ I+ Y ++ +   A   F  M +  ++PD  T+V++ S  AQ
Sbjct: 188 AHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQ 247

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                  R VH +I   G F  ++ I NA++D+Y+K G + +AC +F+GL  KDVISWNT
Sbjct: 248 SGSIELGRQVHSWINDHG-FGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNT 306

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           LI GY    L  EA+ +FQ M    E  PN  T +SIL A +H+GA+  G  IH  + K 
Sbjct: 307 LIGGYTHMNLYKEALLLFQDMLRSGE-KPNDVTMLSILSACAHLGAIDIGRWIHVYIDKR 365

Query: 478 C--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
              +     + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A +
Sbjct: 366 LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M   G+ PD ITFV LL+ACSHSG++  G+  F  M  ++ + P L+HYGCM+DL 
Sbjct: 426 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLX 485

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           G +G    A   I  M + PD  IW +LL AC++HGN+ELG   +  L +++ EN G YV
Sbjct: 486 GHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYV 545

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+SNIYA   +W  V + R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY 
Sbjct: 546 LLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 605

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
            L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I K
Sbjct: 606 MLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 665

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLRVC +CH  TK IS+I +REII RD  RFHHF+DG CSC DYW
Sbjct: 666 NLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 183/389 (47%), Gaps = 9/389 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G +  +   FD I  ++V +WN+ IS Y   G   EA++ F + 
Sbjct: 167 RDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKM 226

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   VL AC    ++  G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 227 -MKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGE 285

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF  +  +D  SWN +I GY       EAL +  +M   G   + +T+ SIL  
Sbjct: 286 LETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSA 345

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VFD M+ R + 
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        A   F+ M++ GI+PD +T V L S  +        R +   +
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            R    M  +     ++D+    G+   A  +   + ++ D + W +L+     +G    
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVEL 525

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYS 459
                Q + +    NP  G+YV +   Y+
Sbjct: 526 GESYAQNLIKIEPENP--GSYVLLSNIYA 552


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/778 (34%), Positives = 429/778 (55%), Gaps = 73/778 (9%)

Query: 55   QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
            + C     + +LHA L ++G  +   +STKL+  YA +G    S+  FD     + + W 
Sbjct: 356  KRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWG 415

Query: 115  SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF 174
             +I  YV  G   EAV  +++       +   + FP VLKAC                  
Sbjct: 416  VLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSG---------------- 459

Query: 175  EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
                                      F D+ V   G  N           A E LD+  +
Sbjct: 460  --------------------------FGDLSV---GGKNG---------QASEGLDMFSQ 481

Query: 235  MRLEGVSMDPITVASILPVCA--------RSDNILSGLLIHLYIVKHGLEFNL-FVSNNL 285
            M  E V  D +T+ S+   C+        R   +  G  +H ++++  ++  L F+   L
Sbjct: 482  MISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPAL 541

Query: 286  INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
            + +YA  G +R   +VF+ + E+ ++SWN++I+ + ++  P  A   F  MQ  G+ PD 
Sbjct: 542  MELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDS 601

Query: 346  LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
             +L S  S    ++  +    +HG+I++ G F +   + NA++DMYAK G ++SA  +FE
Sbjct: 602  YSLASSLSACGTISFSQLGAQIHGYIIKTGNFND--FVQNALIDMYAKCGFVHSANKMFE 659

Query: 406  GLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +  K +++WN++I G++QNG + EAI +F QM   C  +  ++ T++S++ A SH+G L
Sbjct: 660  KIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNC--VKMDKLTFLSVIQACSHLGYL 717

Query: 465  RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             +G  +H ++I   L  D ++ T L DMY KCG +  A  +F ++   S V W+ +I+ +
Sbjct: 718  EKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGY 777

Query: 525  GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
            G+HGQ +  ++ F QML  G++P+ ITF+ +L+ACSH+G V EG+ YF+ M  EFG++P 
Sbjct: 778  GMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPK 836

Query: 585  LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
              H+ CMVDL  RAG L  A+  I ++P   ++SIWGALL  CRIH  +++       L 
Sbjct: 837  HDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLL 896

Query: 645  EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
            +VD+ + GYY L+SNIYA  G W+   +VRS+ + +GL+K PG+S+IE++ K+  F  G+
Sbjct: 897  DVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGD 956

Query: 705  RTHPKYEKIYDELRNLTAKMKSLGY--VPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
             +H + + IY  L N  + + +  Y   PD S V     +  KE+ + SHSE+LAIAFGI
Sbjct: 957  TSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIAFGI 1014

Query: 763  ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I++ P + ++I KNLRVC DCH++ K  S+IT REII+RD NRFH F++G CSC DYW
Sbjct: 1015 INTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 101/191 (52%), Gaps = 10/191 (5%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
           Q+  +C++ +  ++ F  + Q+C+ L ++++   +H  L++ G  K  +  T L + Y+ 
Sbjct: 691 QMYMNCVKMD--KLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSK 748

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            G+L  +   FD +S R++ +W+ MI+ Y   G+++  +  F Q  L SG++P+  TF  
Sbjct: 749 CGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQM-LGSGIKPNDITFMH 807

Query: 152 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-R 207
           +L AC +   + +GK    S+ + G E      A ++ +  R G  N A ++   +P   
Sbjct: 808 ILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPA 867

Query: 208 DSGSWNAMISG 218
           +S  W A+++G
Sbjct: 868 NSSIWGALLNG 878


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 267/721 (37%), Positives = 399/721 (55%), Gaps = 78/721 (10%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDE 234
           D     +L+  YC  G   + R++F+  P+  RDS  +NAMI+GY  +G+   AL++   
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 235 MRLEGVSMDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLE-FNLFVSNNLINMYAK- 291
           MR +    D  T  S+L        N      +H  +VK G+   +  V N L+++Y K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 292 ---FGM----MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-------- 336
               G+    M  A ++FD+M +RD ++W ++I  Y +++D   A   F  M        
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 337 -------------QQA----------GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
                        Q+A          GIQ D +T  ++ S  A +   +  + VH +I++
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK 317

Query: 374 RGWFMED---VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY-------- 422
                     + + NA++ +Y K   ++ A  +F  +PV+++I+WN +++GY        
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377

Query: 423 -----------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
                                  AQNG   E +++F+ M   +   P    +   L A S
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR-LDGFEPCDFAFAGALTACS 436

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +GAL  G ++HA+++       + V   ++ MY KCG ++ A S+F  +P    V WN+
Sbjct: 437 VLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNS 496

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+  G HG G KA+  F QML EGV PD ITF+++LTACSH+GLV +G+ YF+ M E +
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P   HY  MVDLF RAG    A   I +MP +P A +W ALL  CRIHGNM+LG  A
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           +++LF++  +N G YVL+SNIYA+VG+W  V +VR L RD+ ++K P  S IEV NKV +
Sbjct: 617 AEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHV 676

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F   +  HP+   +Y  L  L  +MK LGY+PD  FVL D+E ++KEH L++HSE+LA+ 
Sbjct: 677 FMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVG 736

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FGI+  PP + +++FKN+R+CGDCHN  KF+S++  REIIVRD  RFHHFK+G CSC DY
Sbjct: 737 FGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDY 796

Query: 820 W 820
           W
Sbjct: 797 W 797



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 35/273 (12%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ------ 135
           S  L+  Y     +  +R  F  +  RN+ TWN+++S YV  GR+ EA   F +      
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390

Query: 136 FTLT------------------------SGLRPDFYTFPPVLKACR---NLVDGKKIHCS 168
            TLT                         G  P  + F   L AC     L +G+++H  
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           ++ LG+E  + V  +++ MY + G+   A  +F  MP  D  SWN+MI+   Q G+ V+A
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKA 510

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLIN 287
           +++ D+M  EGV  D IT  ++L  C+ +  +  G    +  +  +G+         +++
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVD 570

Query: 288 MYAKFGMMRHALRVFDQMMERDVVS-WNSIIAA 319
           ++ + GM  +A  V D M  +     W +++A 
Sbjct: 571 LFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG 603



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 142/350 (40%), Gaps = 84/350 (24%)

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL----- 418
           +R+VH  ++  G+      + N +++MY K   +  A  +FE +P  D I+  TL     
Sbjct: 32  ARAVHAHMIASGFKPRGHFL-NRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 419 ----------------------------ITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
                                       ITGYA NG    A+E+F+ M   ++  P+  T
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRR-DDFRPDDFT 149

Query: 451 YVSILPAYS-HVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGK--------CGRID 500
           + S+L A    VG  +Q  ++H  V+K  + C    V   L+ +Y K        C  + 
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMV 209

Query: 501 DAMSLFYQVPRSSSV-------------------------------PWNAIISCHGIHGQ 529
            A  LF ++P+   +                                WNA+IS +   G 
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPH---- 584
             +AL   R+M   G++ D IT+ ++++AC++ G    G Q + ++++ E  + P+    
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNE--LNPNHSFC 327

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           L     ++ L+ +   +  A      MPVR +   W A+L      G ME
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRME 376



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 9/181 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L + ++LHA LV  G   ++     +++ YA  G +  +   F  +   ++ +WNSMI+ 
Sbjct: 441 LENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAA 500

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLK-LGFE 175
             + G   +A++ F Q  L  G+ PD  TF  VL AC +  LV+ G+    S+L+  G  
Sbjct: 501 LGQHGHGVKAIELFDQM-LKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGN---AVEALDI 231
                 A ++ ++CR G+ + AR + D MP +     W A+++G    GN    +EA + 
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619

Query: 232 L 232
           L
Sbjct: 620 L 620


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 275/769 (35%), Positives = 431/769 (56%), Gaps = 22/769 (2%)

Query: 64  KRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYV 121
           + LH  L+ S  + T    +  L+  Y+  G +  +R  FD +   R++ +W +M S   
Sbjct: 60  RALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLA 119

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNL--VDGKKIHCSVLKLGFEW- 176
           R G   E++       L  GLRP+ +T     +AC  + L  + G  +   VLK GF W 
Sbjct: 120 RNGAERESLR-LLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGF-WG 177

Query: 177 -DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            DV V  +L+ M+ R G    A+++FD +  R S  W  +I+ Y Q+G A + +++   M
Sbjct: 178 TDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHM 237

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM- 294
             +G   D  +++S++  C    ++  G  +H   ++ GL  +  VS  L++MYAK  M 
Sbjct: 238 LDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKME 297

Query: 295 --MRHALRVFDQMMERDVVSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSL 351
             M HA +VF  M   +V+SW ++I+ Y QS          F  M    I+P+ +T  +L
Sbjct: 298 RSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNL 357

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
               A L+D  + R +H  +++      +V+ GNA+V MYA+ G +  A   F+ L   +
Sbjct: 358 LKACANLSDQDSGRQIHAHVLKTSIAHVNVV-GNALVSMYAESGCMEEARKAFDQLYETN 416

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           ++S +  +     N   S  IE         +   +  T+ S+L A + VG L +G K+H
Sbjct: 417 ILSMSPDVETERNNASCSSKIEGM-------DDGVSTFTFASLLSAAASVGLLTKGQKLH 469

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           A  +K     D  ++  LV MY +CG ++DA   F ++   + + W +IIS    HG   
Sbjct: 470 ALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAK 529

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL+ F  M+  GV+P+ +T++++L+ACSH GLV EG+ +F  MQ++ G+ P ++HY C+
Sbjct: 530 QALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACI 589

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL  R+G +  A  FI  MP + DA +W  LL ACR +GN E+G +A++ +  ++  + 
Sbjct: 590 VDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDP 649

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
             YVL+SN+YA+ G W+ V  +RSL RD+ L K  G S ++V N +  F  G+ +HP   
Sbjct: 650 APYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAI 709

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            IY +L  L  ++K +GYVPD S VL D+ E+ KE  L  HSE++A+AFG+I++    P+
Sbjct: 710 DIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPM 769

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IFKNLRVC DCH+  K+IS+ T REII+RDSNRFH  KDGICSCG+YW
Sbjct: 770 RIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 16/306 (5%)

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +P+TAH   ++               L +  A+  D R  R++H  ++R      D ++ 
Sbjct: 27  NPLTAHLVLSSDHSCDA-------AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVA 79

Query: 385 NAVVDMYAKLGIINSACAVFEGL-PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           N+++ MY+K G + +A  VF+ +  V+D++SW  + +  A+NG   E++ +   M E   
Sbjct: 80  NSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLE-LG 138

Query: 444 INPNQGTYVSILPAY--SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           + PN  T  +   A     +  L  G+ +   +       DV V   L+DM+ + G +  
Sbjct: 139 LRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVA 198

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F  +   +SV W  +I+ +   G   K +  F  MLD+G  PD  +  S+++AC+ 
Sbjct: 199 AQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTE 258

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG---HLGMAHNFIQNMPVRPDAS 618
            G V  GQ+  H +    G+         +VD++ +      +  A    + MP R +  
Sbjct: 259 LGSVRLGQQ-LHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMP-RHNVM 316

Query: 619 IWGALL 624
            W AL+
Sbjct: 317 SWTALI 322


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 286/770 (37%), Positives = 436/770 (56%), Gaps = 17/770 (2%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            ++++ A +  S  +K ++  + LV+ +A  G +  ++  F+ +  RN  T N ++    R
Sbjct: 269  LEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLAR 328

Query: 123  CGRLSEAVDCFYQFTLTSGLRPDFYT-FPPVLKACRNLVDGKK----IHCSVLKLGFE-- 175
              +  EA   F +      +    Y           NL +GK+    +H  +++      
Sbjct: 329  QHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDV 388

Query: 176  WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            W + +  +L+++Y +    + AR +F  MP +D+ SWN++ISG   +    EA+     M
Sbjct: 389  W-ILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTM 447

Query: 236  RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            R  G+     +V S L  CA    I+ G  IH   +K GL+ ++ VSN L+ +YA+   M
Sbjct: 448  RRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCM 507

Query: 296  RHALRVFDQMMERDVVSWNSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSI 354
                +VF  M E D VSWNS I A   S   +  A  +F  M QAG +P+ +T +++ S 
Sbjct: 508  EEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSA 567

Query: 355  VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVI 413
            V+ L+     R +H  I++     +D  I N ++  Y K   +     +F  +  + D +
Sbjct: 568  VSSLSLLELGRQIHALILKHS-VADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEV 626

Query: 414  SWNTLITGYAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
            SWN +I+GY  NG+  +A+  V+ MM++   ++    T  ++L A + V  L +G+++HA
Sbjct: 627  SWNAMISGYIHNGILHKAMGLVWLMMQKGQRLD--DFTLATVLSACASVATLERGMEVHA 684

Query: 473  RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
              I+ CL  +V V + LVDMY KCG+ID A   F  +P  +   WN++IS +  HG G K
Sbjct: 685  CAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGK 744

Query: 533  ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
            AL  F QM   G  PDH+TFV +L+ACSH GLV EG  +F  M E + + P ++H+ CMV
Sbjct: 745  ALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMV 804

Query: 593  DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSEN 650
            DL GRAG +     FI+ MP+ P+A IW  +LGA CR +  N ELG  A+  L E++  N
Sbjct: 805  DLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLN 864

Query: 651  VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
               YVL+SN++A  GKWE V+E R   R+  +KK  G S + + + V +F  G++THP+ 
Sbjct: 865  AVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEK 924

Query: 711  EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
            EKIYD+L+ +  KM+ LGYVP+  + L D+E + KE +L+ HSE+LAIAF +++   + P
Sbjct: 925  EKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQSELP 983

Query: 771  IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I+I KNLRVCGDCH   K+IS I  R+II+RDSNRFHHF  GICSC DYW
Sbjct: 984  IRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/595 (25%), Positives = 300/595 (50%), Gaps = 24/595 (4%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY 107
           +D++    SCT +    +LH  +  +G    VF    LVN +   G+L  ++  FD +  
Sbjct: 44  LDYNRYRDSCT-VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQ 102

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-----G 162
           +N+ +W+ ++S Y + G   EA    ++  +++GL P+ Y     L+AC+ L       G
Sbjct: 103 KNLVSWSCLVSGYAQNGMPDEAC-MLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLG 161

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            +IH  + K  +  D+ ++  L+ MY  C   + + AR++F+++ ++ S SWN++IS YC
Sbjct: 162 MEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDD-ARRVFEEIKMKTSASWNSIISVYC 220

Query: 221 QSGNAVEALDILDEMRLEGVSM----DPITVASILPV-CARSDNILSGLLIHL-YIVKHG 274
           + G+A+ A  +   M+ E   +    +  T  S++ V C+  D  L+ L   L  I K  
Sbjct: 221 RRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSS 280

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
              +L+V + L++ +A++G++  A  +F+QM +R+ V+ N ++    + +    A   F 
Sbjct: 281 FVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFK 340

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDC----RNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
            M+   ++ +  +   L S   + ++     R  + VH +++R       ++IGNA+V++
Sbjct: 341 EMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNL 399

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           YAK   I++A ++F+ +P KD +SWN++I+G   N    EA+  F  M   N + P++ +
Sbjct: 400 YAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRR-NGMVPSKFS 458

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
            +S L + + +G +  G +IH   IK  L  DV V+  L+ +Y +   +++   +F+ +P
Sbjct: 459 VISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518

Query: 511 RSSSVPWNAIISCHGI-HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
               V WN+ I           +A+ +F +M+  G +P+ +TF+++L+A S   L+  G 
Sbjct: 519 EYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELG- 577

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           R  H +  +  +         ++  +G+   +         M  R D   W A++
Sbjct: 578 RQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMI 632



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 238/442 (53%), Gaps = 23/442 (5%)

Query: 149 FPPV------LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
           FPP+       +    + D  ++H  + K G   DVF   +L++++ R G    A+KLFD
Sbjct: 39  FPPLNLDYNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFD 98

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR-SDNIL 261
           +MP ++  SW+ ++SGY Q+G   EA  +   +   G+  +   + S L  C     N+L
Sbjct: 99  EMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNML 158

Query: 262 S-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM-MRHALRVFDQMMERDVVSWNSIIAA 319
             G+ IH  I K     ++ +SN L++MY+     +  A RVF+++  +   SWNSII+ 
Sbjct: 159 KLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISV 218

Query: 320 YEQSNDPITAHGFFTTMQQAGIQ----PDLLTLVSLTSIVAQLNDCRNSRSVHGFI-MRR 374
           Y +  D I+A   F++MQ+   +    P+  T  SL ++   L DC  +        + +
Sbjct: 219 YCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEK 278

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
             F++D+ +G+A+V  +A+ G+I+SA  +FE +  ++ ++ N L+ G A+     EA ++
Sbjct: 279 SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGAL----RQGIKIHARVIKNCLCFDVF--VATC 488
           F+ M++  EIN +  +Y  +L A++    L    R+G ++HA +I+N L  DV+  +   
Sbjct: 339 FKEMKDLVEINAS--SYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNAL-VDVWILIGNA 395

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LV++Y KC  ID+A S+F  +P   +V WN+IIS    + + ++A+  F  M   G+ P 
Sbjct: 396 LVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPS 455

Query: 549 HITFVSLLTACSHSGLVSEGQR 570
             + +S L++C+  G +  GQ+
Sbjct: 456 KFSVISTLSSCASLGWIMLGQQ 477



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 17/184 (9%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C  +  ++R   +HA  + +     V   + LV+ YA  G + ++   F+ +  RN
Sbjct: 666 VLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRN 725

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHC 167
           +Y+WNSMIS Y R G   +A+  F Q     G  PD  TF  VL AC +  LVD    H 
Sbjct: 726 IYSWNSMISGYARHGHGGKALKLFTQMK-QHGQLPDHVTFVGVLSACSHVGLVDEGFEHF 784

Query: 168 SVLKLGFEWDVFVAASLLHMYCR---FGLANVARKL---FDDMPVRDSG-SWNAMISGYC 220
             +   +E    +A  + H  C     G A   +KL      MP+  +   W  ++   C
Sbjct: 785 KSMGEVYE----LAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACC 840

Query: 221 QSGN 224
           ++ +
Sbjct: 841 RANS 844


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/588 (39%), Positives = 372/588 (63%), Gaps = 4/588 (0%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M ++G+ ++     S+L  C     I  G  +H +++K   E  +++   LI +Y K   
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A RV D+M ER+VVSW ++I+ Y Q      A   F  M  +G  P+  T  ++ + 
Sbjct: 61  LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
               +  +  R +H  +++   F   + +G++++DMYAK G I  A  VF+GLP +DV+S
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTS-FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
              +I+GYAQ GL  EA+++F+ ++    +  N  TY S+L A S + AL  G ++H+ V
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQR-EGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 238

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           ++  L F V +   L+DMY KCG +  +  +F  +P  + + WNA++  +  HG G +A+
Sbjct: 239 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298

Query: 535 NFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMV 592
             F+ M +E  V+PD +TF+++L+ CSH G+   G + ++ M+ ++ G +P ++HYGC+V
Sbjct: 299 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 358

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DLFGRAG +  A  FI+ MP  P A+IWG+LLGACR+H N+ +G   + RL E++SEN G
Sbjct: 359 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 418

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
            YV++SN+YA+ G+W+ V  VR L +++ + K PG S IE++  +  F+  +R+HP+ E+
Sbjct: 419 NYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEE 478

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           ++ ++R L+ K+K  GYVP+ S VL DV++++KE IL  HSE+LA+AFG+I +P  +P++
Sbjct: 479 VFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVR 538

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLR+C DCHN+ KF+S++  RE+ +RD NRFHH   G CSCGDYW
Sbjct: 539 IIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 225/393 (57%), Gaps = 7/393 (1%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           GL  +F  +  VL  C     + +G+++H  ++K  +E  V++   L+ +Y +      A
Sbjct: 5   GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 64

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++ D+MP R+  SW AMISGY Q G A EAL +  EM + G + +  T A++L  C  S
Sbjct: 65  RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
                G  IH  ++K   E ++FV ++L++MYAK G +  A RVFD + ERDVVS  +II
Sbjct: 125 SGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAII 184

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           + Y Q      A   F  +Q+ G++ + +T  S+ + ++ L    + R VH  ++R    
Sbjct: 185 SGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLP 244

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
              V++ N+++DMY+K G +  +  +F+ +P + VISWN ++ GY+++GL  EA+E+F++
Sbjct: 245 FY-VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 303

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGK 495
           M+E N++ P+  T++++L   SH G   +G++I   ++     F+  +    C+VD++G+
Sbjct: 304 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 363

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            GR+++A     ++P   ++  W +++    +H
Sbjct: 364 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 201/380 (52%), Gaps = 12/380 (3%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +D +   C   T +   +R+HA ++ +     V+  T+L+  Y     L  +R   D + 
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            RNV +W +MIS Y + G  SEA+  F +  L SG  P+ +TF  VL +C +      G+
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEM-LMSGTAPNEFTFATVLTSCTSSSGFQLGR 131

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  V+K  FE  +FV +SLL MY + G    AR++FD +P RD  S  A+ISGY Q G
Sbjct: 132 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLG 191

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EALD+   ++ EG+  + +T AS+L   +    +  G  +H ++++  L F + + N
Sbjct: 192 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 251

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQ 342
           +LI+MY+K G + ++ R+FD M ER V+SWN+++  Y +      A   F  M++   ++
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311

Query: 343 PDLLTLVSLTSIVAQ--LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           PD +T +++ S  +   + D R     +  + ++  F  ++     VVD++ + G +  A
Sbjct: 312 PDSVTFLAVLSGCSHGGMED-RGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 370

Query: 401 CAVFEGLPVKDVIS-WNTLI 419
               + +P +   + W +L+
Sbjct: 371 FEFIKKMPFEPTAAIWGSLL 390



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 7/168 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H +++H+ ++ +     V     L++ Y+  G L++SR  FD +  R V +WN+M+  
Sbjct: 228 LDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVG 287

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVL--KLGF 174
           Y + G   EAV+ F      + ++PD  TF  VL  C +  + D G +I   ++  K GF
Sbjct: 288 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 347

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
           E ++     ++ ++ R G    A +    MP   + + W +++ G C+
Sbjct: 348 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL-GACR 394


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/702 (36%), Positives = 401/702 (57%), Gaps = 35/702 (4%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLFDDMPVRDS 209
           +L+ C+++   K+IH   +K+G   D      ++   C    G    AR++FD +P    
Sbjct: 13  LLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTL 72

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             WN MI GY +  +    + +   M    +  D  T   +L    R+  +  G ++  +
Sbjct: 73  FIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNH 132

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            VKHG + NLFV    I+M++   ++  A +VFD     +VV+WN +++ Y +      +
Sbjct: 133 AVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKS 192

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M++ G+ P+ +TLV + S  ++L D    + ++ +I   G    ++I+ N ++D
Sbjct: 193 KMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI-NGGIVERNLILENVLID 251

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG---LAS----------------- 429
           M+A  G ++ A +VF+ +  +DVISW +++TG+A  G   LA                  
Sbjct: 252 MFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAM 311

Query: 430 -----------EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
                      EA+ +F+ M+  N + P++ T VSIL A +H+GAL  G  +   + KN 
Sbjct: 312 IDGYLRMNRFIEALALFREMQMSN-VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS 370

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +  D FV   L+DMY KCG +  A  +F ++       W A+I    I+G G++AL  F 
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFS 430

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M++  + PD IT++ +L AC+H+G+V +GQ +F  M  + GIKP++ HYGCMVDL GRA
Sbjct: 431 NMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRA 490

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  AH  I NMPV+P++ +WG+LLGACR+H N++L  +A+ ++ E++ EN   YVL+ 
Sbjct: 491 GRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLC 550

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           NIYA   +WE + +VR L  +RG+KKTPG S +E+N  V  F  G+++HP+ ++IY +L 
Sbjct: 551 NIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLE 610

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
           N+   +   GY PD S V  D+ E++KE  L  HSE+LAIA+ +ISS P   I+I KNLR
Sbjct: 611 NMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLR 670

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +C DCH+  K +S+   RE+IVRD  RFHHF+ G CSC ++W
Sbjct: 671 MCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 163/576 (28%), Positives = 273/576 (47%), Gaps = 46/576 (7%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L + C  ++ +K++H+  +  G         +++ F      G + ++R  FD I    +
Sbjct: 13  LLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTL 72

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRN--LVDGKKIHC 167
           + WN+MI  Y R       V   Y   L S ++PD +TFP +LK   RN  L  GK +  
Sbjct: 73  FIWNTMIKGYSRINHPQNGVS-MYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLN 131

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             +K GF+ ++FV  + +HM+    L ++ARK+FD     +  +WN M+SGY +     +
Sbjct: 132 HAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKK 191

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           +  +  EM   GVS + +T+  +L  C++  ++  G  I+ YI    +E NL + N LI+
Sbjct: 192 SKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLID 251

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIA----------------------------- 318
           M+A  G M  A  VFD M  RDV+SW SI+                              
Sbjct: 252 MFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAM 311

Query: 319 --AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
              Y + N  I A   F  MQ + ++PD  T+VS+ +  A L        V  +I +   
Sbjct: 312 IDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNS- 370

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              D  +GNA++DMY K G +  A  VF+ +  KD  +W  +I G A NG   EA+ +F 
Sbjct: 371 IKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFS 430

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH-ARVIKNCLCFDVFVATCLVDMYGK 495
            M E + I P++ TY+ +L A +H G + +G     +  +++ +  +V    C+VD+ G+
Sbjct: 431 NMIEAS-ITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGR 489

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
            GR+++A  +   +P + +S+ W +++    +H     A    +Q+L+  + P++     
Sbjct: 490 AGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILE--LEPENGAVYV 547

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           LL     +    E  R    +  E GIK   K  GC
Sbjct: 548 LLCNIYAACKRWENLRQVRKLMMERGIK---KTPGC 580



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 156/330 (47%), Gaps = 13/330 (3%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D+F +C ++   + +   +    K + V S T +V  +AN+G +  +R  FD I  R+  
Sbjct: 251 DMFAACGEMDEAQSVFDNM----KNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYV 306

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +W +MI  Y+R  R  EA+  F +  + S ++PD +T   +L AC +L     G+ +   
Sbjct: 307 SWTAMIDGYLRMNRFIEALALFREMQM-SNVKPDEFTMVSILTACAHLGALELGEWVKTY 365

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           + K   + D FV  +L+ MY + G    A+K+F +M  +D  +W AMI G   +G+  EA
Sbjct: 366 IDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEA 425

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLIN 287
           L +   M    ++ D IT   +L  C  +  +  G    + + ++HG++ N+     +++
Sbjct: 426 LAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVD 485

Query: 288 MYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL- 345
           +  + G +  A  V   M ++ + + W S++ A     +   A       Q   ++P+  
Sbjct: 486 LLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAE--MAAKQILELEPENG 543

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
              V L +I A      N R V   +M RG
Sbjct: 544 AVYVLLCNIYAACKRWENLRQVRKLMMERG 573


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 290/761 (38%), Positives = 427/761 (56%), Gaps = 19/761 (2%)

Query: 73   SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
            SG    ++  + LV+ +A  G    ++  F  +  +N  T N +I   VR     EAV  
Sbjct: 304  SGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKI 363

Query: 133  FYQFTLTSGLRPDFYTFPPVLKAC-------RNLVDGKKIHCSVLKLGF-EWDVFVAASL 184
            F     T  +  D Y    +L A          L  G+ +H  +L+ G  +  + V+  L
Sbjct: 364  FVGTRNTVDVNADTYVV--LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGL 421

Query: 185  LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            ++MY + G    A K+F  M   D  SWN +IS   Q+GN  EA+     MR   +S   
Sbjct: 422  VNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSN 481

Query: 245  ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
              + S L  CA    + +G  +H   VK GL+ +  VSN L+ MY + G M    +VF+ 
Sbjct: 482  FALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNS 541

Query: 305  MMERDVVSWNSIIAAYEQSNDPITA-HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            M E D VSWN+++     S  PI+     F  M + G+ P+ +T ++L + ++ L+    
Sbjct: 542  MAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLEL 601

Query: 364  SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGY 422
             + VH  +M+ G  MED ++ NA++  YAK G + S   +F  +   +D ISWN++I+GY
Sbjct: 602  GKQVHAAVMKHG-VMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGY 660

Query: 423  AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
              NG   EA++   +M    +I  +  T+  IL A + V AL +G+++HA  I++ L  D
Sbjct: 661  IYNGNLQEAMDCVWLMIHSGQI-MDCCTFSIILNACASVAALERGMELHAFGIRSHLESD 719

Query: 483  VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
            V V + LVDMY KCGR+D A  LF  + + +   WN++IS +  HG G KA+  F +ML 
Sbjct: 720  VVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLR 779

Query: 543  EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
                PDH+TFVS+L+ACSH+GLV  G  YF MM +  GI P ++HY C++DL GRAG + 
Sbjct: 780  SRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDH-GILPQIEHYSCVIDLLGRAGKID 838

Query: 603  MAHNFIQNMPVRPDASIWGALLGACRIH---GNMELGAVASDRLFEVDSENVGYYVLMSN 659
                +IQ MP+ P+A IW  +L ACR      N++LG  AS  L E++ +N   YVL SN
Sbjct: 839  KIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASN 898

Query: 660  IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
             +A  G WE   + R+  R    KK  G S + +N+ V  F  G+R+HP  ++IY++L  
Sbjct: 899  FHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNF 958

Query: 720  LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
            L   +++ GYVP   + L D+EE+ KE +L+ HSE+LAIAF +++     PI+I KNLRV
Sbjct: 959  LIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRV 1017

Query: 780  CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            CGDCH   ++ISQ+  R+II+RDS RFHHFKDG CSCGDYW
Sbjct: 1018 CGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 285/596 (47%), Gaps = 34/596 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LH  L+  G    +F    LVN YA    L+ +   FD +  RN  +W  ++S YV  
Sbjct: 81  ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140

Query: 124 GRLSEAVDCFYQF--TLTSGLRPDFYTFPPVLKACRN-----LVDGKKIHCSVLKLGFEW 176
           G   EA   F      + +G RP  +TF  +L+AC++     L    ++H  V K  +  
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200

Query: 177 DVFVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           +  V  +L+ MY  C  G   +A+++FD  P+RD  +WNA++S Y + G+      +  +
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260

Query: 235 MRL--EGVSMDPI--TVASILP---VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           M+     + + P   T  S++    + + S  +L  +L+  +++K G   +L+V + L++
Sbjct: 261 MQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLV--WVLKSGCSSDLYVGSALVS 318

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY-EQSNDPITAHGFFTTMQQAGIQPDLL 346
            +A+ G+   A  +F  + +++ V+ N +I     Q         F  T     +  D  
Sbjct: 319 AFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNAD-- 376

Query: 347 TLVSLTSIVAQLN----DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           T V L S +A+ +      R  R VHG ++R G     + + N +V+MYAK G I SA  
Sbjct: 377 TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASK 436

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ +   D ISWNT+I+   QNG   EA+  + +M + + I+P+    +S L + + + 
Sbjct: 437 IFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQ-SCISPSNFALISSLSSCAGLK 495

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            L  G ++H   +K  L  D  V+  LV MYG+CG + D   +F  +     V WN ++ 
Sbjct: 496 LLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM- 554

Query: 523 CHGIHGQGDKALN----FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
             G+       ++     F  M+  G+ P+ +TF++LL A S   ++  G++  H    +
Sbjct: 555 --GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ-VHAAVMK 611

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            G+         ++  + ++G +G   +   NM  R DA  W +++     +GN++
Sbjct: 612 HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 230/492 (46%), Gaps = 22/492 (4%)

Query: 151 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
           P+L+   +    + +H  ++K G   D+F+   L++ Y +      A ++FD+MP R++ 
Sbjct: 69  PLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAV 128

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLE---GVSMDPITVASILPVC--ARSDNILSGLL 265
           SW  ++SGY   G A EA  +   M  E   G      T  ++L  C     D +   + 
Sbjct: 129 SWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQ 188

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAK--FGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           +H  + K     N  V N LI+MY     G    A RVFD    RD+++WN++++ Y + 
Sbjct: 189 VHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKK 248

Query: 324 NDPITAHGFFTTMQQAG----IQPDLLTLVSL-TSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            D  +    F  MQ+      ++P   T  SL T+             V  ++++ G   
Sbjct: 249 GDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSG-CS 307

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D+ +G+A+V  +A+ G+ + A  +F  L  K+ ++ N LI G  +   + EA+++F  +
Sbjct: 308 SDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF--V 365

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKI----HARVIKNCLC-FDVFVATCLVDMY 493
              N ++ N  TYV +L A +      +G++I    H  +++  L    + V+  LV+MY
Sbjct: 366 GTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMY 425

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I+ A  +F  +  +  + WN IIS    +G  ++A+  +  M    + P +   +
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S L++C+   L++ GQ+  H    ++G+         +V ++G  G +        +M  
Sbjct: 486 SSLSSCAGLKLLTAGQQ-VHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAE 544

Query: 614 RPDASIWGALLG 625
             + S W  ++G
Sbjct: 545 HDEVS-WNTMMG 555



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 195/412 (47%), Gaps = 38/412 (9%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A +LP+  R  +  S   +H+ ++K GL  +LF+ N+L+N YAK   +  A +VFD+M E
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ---QAGIQPDLLTLVSLTSIVAQLNDCRN- 363
           R+ VSW  +++ Y        A   F  M    QAG +P   T  +L      L  C++ 
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTL------LRACQDG 178

Query: 364 -------SRSVHGFIMRRGWFMEDVIIGNAVVDMYAK--LGIINSACAVFEGLPVKDVIS 414
                  +  VHG + +   +  +  + NA++ MY    +G    A  VF+G P++D+I+
Sbjct: 179 GPDRLGFAVQVHGLVSKTE-YASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLIT 237

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECN---EINPNQGTYVSILPAYSHVGALRQGI-KI 470
           WN L++ YA+ G  +    +F+ M+  +   ++ P + T+ S++ A S        + ++
Sbjct: 238 WNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQV 297

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              V+K+    D++V + LV  + + G  D+A  +F  + + ++V  N +I         
Sbjct: 298 LVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFS 357

Query: 531 DKALNFF---RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-----YFHMMQEEFGIK 582
           ++A+  F   R  +D  V  D  T+V LL+A +   +  EG R     + HM++      
Sbjct: 358 EEAVKIFVGTRNTVD--VNAD--TYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGL-TD 412

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             +     +V+++ + G +  A    Q M    D   W  ++ A   +GN E
Sbjct: 413 LKIAVSNGLVNMYAKCGAIESASKIFQLMEA-TDRISWNTIISALDQNGNCE 463



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 7/180 (3%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           +  +LP     G       +H  +IK  L  D+F+   LV+ Y K  R+  A  +F ++P
Sbjct: 64  HADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP 123

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE---GVRPDHITFVSLLTACSHSGLVSE 567
             ++V W  ++S + +HG  ++A   FR ML E   G RP   TF +LL AC   G    
Sbjct: 124 ERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRL 183

Query: 568 G-QRYFHMMQEEFGIKPHLKHYGCMVDLFGR--AGHLGMAHNFIQNMPVRPDASIWGALL 624
           G     H +  +     +      ++ ++G    G   +A       P+R D   W AL+
Sbjct: 184 GFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIR-DLITWNALM 242



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 17/159 (10%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C  +  ++R   LHA  + S     V   + LV+ Y+  G + ++   F+ ++
Sbjct: 688 FSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT 747

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RN ++WNSMIS Y R G   +A++ F +  L S   PD  TF  VL AC         H
Sbjct: 748 QRNEFSWNSMISGYARHGLGRKAIEIFEEM-LRSRESPDHVTFVSVLSACS--------H 798

Query: 167 CSVLKLGFEW-----DVFVAASLLHMYCRFGLANVARKL 200
             +++ G E+     D  +   + H  C   L   A K+
Sbjct: 799 AGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKI 837


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/757 (35%), Positives = 411/757 (54%), Gaps = 100/757 (13%)

Query: 162 GKKIHCSVLKLGFEW-DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+ IH  ++K G  +  VF+  +LL++Y + G ++ A +LFD+MP++ + SWN ++S + 
Sbjct: 31  GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90

Query: 221 QSGNAVEALDILDE-------------------------------MRLEGVSMDPITVAS 249
           ++GN   A  + DE                               M   G+S    T  +
Sbjct: 91  KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK----------FGMMRH-- 297
           +L  CA +  +  G  +H ++VK G    + V+N+L+NMYAK          F  MR   
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210

Query: 298 -------------------ALRVFDQMMERDVVSWNSIIAAY-EQSNDPITAHGFFTTMQ 337
                              AL +FDQM + D+VSWNSII  Y  Q  D      F   ++
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK---- 393
            + ++PD  TL S+ S  A     +  + +H  I+R    +   + GNA++ MYAK    
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAV-GNALISMYAKSGAV 329

Query: 394 -----------------------------LGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
                                        +G I+ A A+F+ L  +DV++W  +I GYAQ
Sbjct: 330 EVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQ 389

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NGL S+A+ +F++M       PN  T  ++L   S + +L  G ++HA  I+      V 
Sbjct: 390 NGLISDALVLFRLMIREGP-KPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVS 448

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQV-PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           V   L+ MY + G I DA  +F  +     ++ W ++I     HG G++A+  F +ML  
Sbjct: 449 VGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRI 508

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
            ++PDHIT+V +L+AC+H GLV +G+ YF++M+    I+P   HY CM+DL GRAG L  
Sbjct: 509 NLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEE 568

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           A+NFI+NMP+ PD   WG+LL +CR+H  ++L  VA+++L  +D  N G Y+ ++N  + 
Sbjct: 569 AYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSA 628

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
            GKWE   +VR   +D+ +KK  G+S +++ NKV IF   +  HP+ + IY  +  +  +
Sbjct: 629 CGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKE 688

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           +K +G++PD + VL D+E++ KE IL  HSE+LAIAF +I++P  + ++I KNLRVC DC
Sbjct: 689 IKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDC 748

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H+  ++IS + EREIIVRD+ RFHHFKDG CSC DYW
Sbjct: 749 HSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/478 (23%), Positives = 201/478 (42%), Gaps = 98/478 (20%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           +L    +S +   G  IH  I+KHGL +  +F++NNL+N+Y K G    A R+FD+M  +
Sbjct: 18  LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQ------------------------------ 338
              SWN+I++A+ ++ +  +A   F  + Q                              
Sbjct: 78  TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137

Query: 339 -AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG-- 395
            +GI P   T  ++ +  A        + VH F+++ G     V + N++++MYAK G  
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQ-SGVVPVANSLLNMYAKCGDS 196

Query: 396 -----------------------------IINSACAVFEGLPVKDVISWNTLITGYAQNG 426
                                          + A A+F+ +   D++SWN++ITGY   G
Sbjct: 197 VMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQG 256

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK---------- 476
               A+E F  M + + + P++ T  S+L A ++  +L+ G +IHA +++          
Sbjct: 257 YDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVG 316

Query: 477 NCL-----------------------CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           N L                         +V   T L+D Y K G ID A ++F  +    
Sbjct: 317 NALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V W A+I  +  +G    AL  FR M+ EG +P++ T  ++L+  S    +  G++  H
Sbjct: 377 VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ-LH 435

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +         +     ++ ++ R+G +  A     ++    D   W +++ +   HG
Sbjct: 436 AVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 214/501 (42%), Gaps = 84/501 (16%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F ++  SC     +   K++H+ +V  G+   V  +  L+N YA  GD   ++  FD
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFD 204

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT-------------------------- 137
            +  ++  TWN+MIS++++  +   A+  F Q T                          
Sbjct: 205 RMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALET 264

Query: 138 -----LTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
                 +S L+PD +T   VL AC N   L  GK+IH  +++   +    V  +L+ MY 
Sbjct: 265 FSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324

Query: 190 RFGLANV---------------------------------ARKLFDDMPVRDSGSWNAMI 216
           + G   V                                 AR +FD +  RD  +W AMI
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMI 384

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
            GY Q+G   +AL +   M  EG   +  T+A++L V +   ++  G  +H   ++    
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTT 335
            ++ V N LI MY++ G ++ A ++F+ +   RD ++W S+I +  Q      A   F  
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEK 504

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKL 394
           M +  ++PD +T V + S    +      +S    +M+    +E      A ++D+  + 
Sbjct: 505 MLRINLKPDHITYVGVLSACTHVGLVEQGKSYFN-LMKNVHNIEPTSSHYACMIDLLGRA 563

Query: 395 GIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQ-G 449
           G++  A      +P++ DV++W +L++    +    LA  A E   +      I+PN  G
Sbjct: 564 GLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLL------IDPNNSG 617

Query: 450 TYVSILPAYSHVGALRQGIKI 470
            Y+++    S  G      K+
Sbjct: 618 AYLALANTLSACGKWEDAAKV 638


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 279/772 (36%), Positives = 448/772 (58%), Gaps = 20/772 (2%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            ++++ A +  SG ++ ++  + LV+ +A  G    +++ F+ +  RNV + N ++   V+
Sbjct: 774  LEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 833

Query: 123  CGRLSEAVDCFYQFTLTSGLRPDFYTFP-------PVLKACRNLVDGKKIHCSVLKLGF- 174
              +   A   F++     G+  D Y           VL+  R    G+++H  V++ G  
Sbjct: 834  QKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRR--KGREVHAHVIRTGLN 891

Query: 175  EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
            +  V +   L++MY + G    A  +F+ M  +DS SWN++ISG  Q+  + +A +    
Sbjct: 892  DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951

Query: 235  MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
            MR  G      T+ S L  CA    I+ G  IH   +K GL+ ++ VSN L+ +YA+ G 
Sbjct: 952  MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 1011

Query: 295  MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTS 353
                L+VF  M E D VSWNS+I A   S   ++ A  +F  M + G     +T +++ S
Sbjct: 1012 FTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILS 1071

Query: 354  IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDV 412
             V+ L+    S  +H  +++     +D  IGNA++  Y K G +N    +F  +   +D 
Sbjct: 1072 AVSSLSLHEVSHQIHALVLKY-CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 1130

Query: 413  ISWNTLITGYAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWN++I+GY  N L  +A++ V+ MM++   ++    T+ ++L A + V  L +G+++H
Sbjct: 1131 VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD--SFTFATVLSACASVATLERGMEVH 1188

Query: 472  ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            A  I+ C+  DV V + LVDMY KCGRID A   F  +P  +   WN++IS +  HG G+
Sbjct: 1189 ACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGE 1248

Query: 532  KALNFFRQMLDEGVRPDHIT-FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            KAL  F +M+ +G  PDH+   + +L+ACSH G V EG  +F  M E + + P ++H+ C
Sbjct: 1249 KALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSC 1308

Query: 591  MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC-RIHG-NMELGAVASDRLFEVDS 648
            MVDL GRAG L    +FI +MP++P+  IW  +LGAC R +G N ELG  A++ L E++ 
Sbjct: 1309 MVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEP 1368

Query: 649  ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            +N   YVL++N+YA+  KWE V + R   ++  +KK  G S + + + V +F  G++ HP
Sbjct: 1369 QNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHP 1428

Query: 709  KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
            + + IYD+LR L  KM+  GY+P   + L D+E + KE +L+ HSE++A+AF +++    
Sbjct: 1429 EKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSA 1487

Query: 769  SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             PI+I KNLRVCGDCH+   +IS+I  R+I++RDSNRFHHF+DG CSCGDYW
Sbjct: 1488 LPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 284/591 (48%), Gaps = 23/591 (3%)

Query: 54   FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
            +Q        + LH   +  G +  +F S  L+N Y  +GDL  ++  FD +S RN+ TW
Sbjct: 554  YQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTW 613

Query: 114  NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-----GKKIHCS 168
              +IS Y + G+  EA   F    + +G  P+ Y F   L+AC+         G +IH  
Sbjct: 614  ACLISGYTQNGKPDEACARFRDM-VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGL 672

Query: 169  VLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            + K  +  DV V   L+ MY      AN AR +FD + +R+S SWN++IS Y + G+ V 
Sbjct: 673  ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVS 732

Query: 228  ALDILDEMRLEGV--SMDP--ITVAS-ILPVCARSDNILSGLLIHLYIV-KHGLEFNLFV 281
            A D+   M+ EG+  S  P   T  S I   C+  D  L  L   L  V K G   +L+V
Sbjct: 733  AYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYV 792

Query: 282  SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AG 340
             + L++ +A+FG+   A  +F+QM  R+VVS N ++    +      A   F  M+   G
Sbjct: 793  GSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG 852

Query: 341  IQPD----LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            I  D    LL+  S  S++ +    R  R VH  ++R G     V IGN +V+MYAK G 
Sbjct: 853  INSDSYVVLLSAFSEFSVLEEGR--RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGA 910

Query: 397  INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
            I  AC+VFE +  KD +SWN+LI+G  QN  + +A E F  M     + P+  T +S L 
Sbjct: 911  IADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM-PSNFTLISTLS 969

Query: 457  AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
            + + +G +  G +IH   +K  L  DV V+  L+ +Y + G   + + +F  +P    V 
Sbjct: 970  SCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVS 1029

Query: 517  WNAII-SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN++I +         +A+ +F +M+  G     +TF+++L+A S   L  E     H +
Sbjct: 1030 WNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIHAL 1088

Query: 576  QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
              ++ +         ++  +G+ G +         M    D   W +++  
Sbjct: 1089 VLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 1139



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%)

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+ S++  Y       +  ++H + IK     ++F++  L+++Y + G +  A  LF ++
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
              + V W  +IS +  +G+ D+A   FR M+  G  P+H  F S L AC  SG
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 27/207 (13%)

Query: 50   FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
            F  +  +C  +  ++R   +HA  + +     V   + LV+ Y+  G + ++   F+ + 
Sbjct: 1168 FATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMP 1227

Query: 107  YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT-FPPVLKACRNLVDGKKI 165
             RNVY+WNSMIS Y R G   +A+  F +  L  G  PD       VL AC         
Sbjct: 1228 LRNVYSWNSMISGYARHGHGEKALKLFTRMML-DGQPPDHVAPLLGVLSACS-------- 1278

Query: 166  HCSVLKLGFEW-----DVF-VAASLLHMYCRFGLANVARKL------FDDMPVRDSG-SW 212
            H   ++ GFE      +V+ ++  + H  C   L   A KL       + MP++ +   W
Sbjct: 1279 HVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIW 1338

Query: 213  NAMISGYCQS-GNAVEALDILDEMRLE 238
              ++   C++ G   E      EM LE
Sbjct: 1339 RTVLGACCRANGRNTELGRRAAEMLLE 1365


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/613 (40%), Positives = 366/613 (59%), Gaps = 10/613 (1%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N +I   C+ G   +A+ +L +      S    T   ++  C    ++   L +H +I+ 
Sbjct: 50  NQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILD 105

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
           +G + + F++  LI MY+  G + +A +VFD+  +R +  WN++  A   +       G 
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165

Query: 333 FTTMQQAGIQPDLLTLV-SLTSIVAQ---LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           +  M + G++ D  T    L + VA    +N     + +H  + RRG +   V I   +V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG-YSSHVYIMTTLV 224

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPN 447
           DMYA+ G ++ A  VF G+PV++V+SW+ +I  YA+NG A EA+  F +MM E  + +PN
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T VS+L A + + AL QG  IH  +++  L   + V + LV MYG+CG+++    +F 
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           ++     V WN++IS +G+HG G KA+  F +ML  G  P  +TFVS+L ACSH GLV E
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G+R F  M  + GIKP ++HY CMVDL GRA  L  A   +Q+M   P   +WG+LLG+C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           RIHGN+EL   AS RLF ++ +N G YVL+++IYA    W+ V  V+ L   RGL+K PG
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
              +EV  K+  F + +  +P  E+I+  L  L   MK  GY+P    VL ++E +EKE 
Sbjct: 525 RCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           I+  HSE+LA+AFG+I++    PI+I KNLR+C DCH +TKFIS+  E+EI+VRD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644

Query: 808 HFKDGICSCGDYW 820
            FK+G+CSCGDYW
Sbjct: 645 RFKNGVCSCGDYW 657



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 178/351 (50%), Gaps = 26/351 (7%)

Query: 13  LCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSC---TKLHHVKRLHAL 69
           LCK   L QA R L   ++ S Q              ++ L   C   + L    R+H  
Sbjct: 56  LCKEGKLKQAIRVLSQESSPSQQT-------------YELLILCCGHRSSLSDALRVHRH 102

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           ++ +G  +  F +TKL+  Y++LG + ++R  FD    R +Y WN++       G   E 
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKAC-------RNLVDGKKIHCSVLKLGFEWDVFVAA 182
           +  +++     G+  D +T+  VLKAC        +L+ GK+IH  + + G+   V++  
Sbjct: 163 LGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+ MY RFG  + A  +F  MPVR+  SW+AMI+ Y ++G A EAL    EM  E    
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281

Query: 243 DP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            P  +T+ S+L  CA    +  G LIH YI++ GL+  L V + L+ MY + G +    R
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           VFD+M +RDVVSWNS+I++Y        A   F  M   G  P  +T VS+
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 6/262 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +HA L   G    V+  T LV+ YA  G + ++ + F  +  RNV +W++MI+ Y + 
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261

Query: 124 GRLSEAVDCFYQFTL-TSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVF 179
           G+  EA+  F +    T    P+  T   VL+AC +L     GK IH  +L+ G +  + 
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V ++L+ MY R G   V +++FD M  RD  SWN++IS Y   G   +A+ I +EM   G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381

Query: 240 VSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            S  P+T  S+L  C+    +  G  L       HG++  +     ++++  +   +  A
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441

Query: 299 LR-VFDQMMERDVVSWNSIIAA 319
            + V D   E     W S++ +
Sbjct: 442 AKMVQDMRTEPGPKVWGSLLGS 463


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 283/843 (33%), Positives = 439/843 (52%), Gaps = 134/843 (15%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  + Q C KL++++   ++HA LVV+G     F  ++L+  Y   G +  +R  FD +S
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            RNV++W +++ +Y   G   E +  FY   +  G+RPD + FP V KAC  L +   GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGK 210

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR------------------------- 198
            ++  +L +GFE +  V  S+L M+ + G  ++AR                         
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270

Query: 199 ------KLFDDMPVR----DSGSWNAMISGYCQSG--------------------NAV-- 226
                 K   DM +     D  +WNA+ISGY QSG                    N V  
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 227 --------------EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
                         EAL +  +M LEGV  + IT+AS +  C     +  G  IH Y +K
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 273 -HGLEFNLFVSNNLINMYAK----------FGMMRH---------------------ALR 300
              L+ +L V N+L++ YAK          FGM++                      A+ 
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450

Query: 301 VFDQM----MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
           +  +M    +E D+++WN ++  + Q  D   A  FF  M   G+ P+  T+    +   
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           Q+ + +  + +HG+++R    +    +G+A++ MY+    +  AC+VF  L  +DV+ WN
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIEL-STGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWN 569

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           ++I+  AQ+G +  A+++ + M   N +  N  T VS LPA S + ALRQG +IH  +I+
Sbjct: 570 SIISACAQSGRSVNALDLLREMNLSN-VEVNTVTMVSALPACSKLAALRQGKEIHQFIIR 628

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             L    F+   L+DMYG+CG I  +  +F  +P+   V WN +IS +G+HG G  A+N 
Sbjct: 629 CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNL 688

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F+     G++P+HITF +LL+ACSHSGL+ EG +YF MM+ E+ + P ++ Y CMVDL  
Sbjct: 689 FQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLS 748

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG       FI+ MP  P+A++WG+LLGACRIH N +L   A+  LFE++ ++ G YVL
Sbjct: 749 RAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVL 808

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           M+NIY+  G+WE   ++R L ++RG+ K PG S IEV  K+  F  G+ +HP  E+I  +
Sbjct: 809 MANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGK 868

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
              L                  DV+EDEKE  L  HSE++A+AFG+IS+   +P++I KN
Sbjct: 869 DGKL------------------DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKN 910

Query: 777 LRV 779
           LRV
Sbjct: 911 LRV 913


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/721 (36%), Positives = 399/721 (55%), Gaps = 78/721 (10%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDE 234
           D     +L+  YC  G   + R++F+  P+  RDS  +NAMI+GY  +G+   AL++   
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 235 MRLEGVSMDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLE-FNLFVSNNLINMYAK- 291
           MR +    D  T  S+L        N      +H  +VK G+   +  V N L+++Y K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 292 ---FGM----MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-------- 336
               G+    M  A ++FD+M +RD ++W ++I  Y +++D   A   F  M        
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 337 -------------QQA----------GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
                        Q+A          GIQ D +T  ++ S  A +   +  + +H +I++
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317

Query: 374 RGWFMED---VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY-------- 422
                     + + NA++ +Y K   ++ A  +F  +PV+++I+WN +++GY        
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377

Query: 423 -----------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
                                  AQNG   E +++F+ M   +   P    +   L A S
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMR-LDGFEPCDFAFAGALTACS 436

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +GAL  G ++HA+++       + V   ++ MY KCG ++ A S+F  +P    V WN+
Sbjct: 437 VLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNS 496

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+  G HG G KA+  F QML EGV PD ITF+++LTACSH+GLV +G+ YF+ M E +
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P   HY  MVDLF RAG    A   I +MP +P A +W ALL  CRIHGNM+LG  A
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           +++LF++  +N G YVL+SNIYA+VG+W  V +VR L RD+ ++K P  S IEV NKV +
Sbjct: 617 AEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHV 676

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F   +  HP+   +Y  L  L  +MK LGY+PD  FVL D+E ++KEH L++HSE+LA+ 
Sbjct: 677 FMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVG 736

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FGI+  PP + +++FKN+R+CGDCHN  KF+S++  REIIVRD  RFHHFK+G CSC DY
Sbjct: 737 FGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDY 796

Query: 820 W 820
           W
Sbjct: 797 W 797



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 35/273 (12%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ------ 135
           S  L+  Y     +  +R  F  +  RN+ TWN+++S YV  GR+ EA   F +      
Sbjct: 331 SNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL 390

Query: 136 FTLT------------------------SGLRPDFYTFPPVLKACR---NLVDGKKIHCS 168
            TLT                         G  P  + F   L AC     L +G+++H  
Sbjct: 391 LTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQ 450

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           ++ LG+E  + V  +++ MY + G+   A  +F  MP  D  SWN+MI+   Q G+ V+A
Sbjct: 451 LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKA 510

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLIN 287
           +++ D+M  EGV  D IT  ++L  C+ +  +  G    +  +  +G+         +++
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVD 570

Query: 288 MYAKFGMMRHALRVFDQMMERDVVS-WNSIIAA 319
           ++ + GM  +A  V D M  +     W +++A 
Sbjct: 571 LFCRAGMFSYARIVIDSMPSKPGAPVWEALLAG 603



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 142/350 (40%), Gaps = 84/350 (24%)

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL----- 418
           +R+VH  ++  G+      + N +++MY K   +  A  +FE +P  D I+  TL     
Sbjct: 32  ARAVHAHMIASGFKPRGHFL-NRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 419 ----------------------------ITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
                                       ITGYA NG    A+E+F+ M   ++  P+  T
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRR-DDFRPDDFT 149

Query: 451 YVSILPAYS-HVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGK--------CGRID 500
           + S+L A    VG  +Q  ++H  V+K  + C    V   L+ +Y K        C  + 
Sbjct: 150 FTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMV 209

Query: 501 DAMSLFYQVPRSSSV-------------------------------PWNAIISCHGIHGQ 529
            A  LF ++P+   +                                WNA+IS +   G 
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPH---- 584
             +AL   R+M   G++ D IT+ ++++AC++ G    G Q + ++++ E  + P+    
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE--LNPNHSFC 327

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           L     ++ L+ +   +  A      MPVR +   W A+L      G ME
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRME 376



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 9/181 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L + ++LHA LV  G   ++     +++ YA  G +  +   F  +   ++ +WNSMI+ 
Sbjct: 441 LENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAA 500

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLK-LGFE 175
             + G   +A++ F Q  L  G+ PD  TF  VL AC +  LV+ G+    S+L+  G  
Sbjct: 501 LGQHGHGVKAIELFDQM-LKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGN---AVEALDI 231
                 A ++ ++CR G+ + AR + D MP +     W A+++G    GN    +EA + 
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619

Query: 232 L 232
           L
Sbjct: 620 L 620


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/747 (36%), Positives = 409/747 (54%), Gaps = 8/747 (1%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
            F +  ++  Y        +R  FD I  RN ++W+ ++  YV+     EA++  Y+  +
Sbjct: 2   TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALE-VYKEMV 60

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
              +  D YT   VL AC  L+D   G+ +     +LGFE DV VA SL+H++ + G   
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 196 VARKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
            A  +F  M  +RD  S  AMI  Y + G    ALD   +MR +G+  D  T A+IL  C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           +  D +L G  IH +I++     N+ V N LI MYAK G ++ +  +F  M  +DVVSWN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++IAAY        A   F  M   G  PD+ T  S+    A      + R +H  I  R
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G F  D  + N ++ M+ + G + SA   F  +  K++ +WNT++  YAQ     +A+ +
Sbjct: 301 G-FDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           ++ M       P++ T+ S++ + + +GALR+G  IH          DV + T LV+MY 
Sbjct: 360 YKNML-LEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYA 418

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           KCG + DA   F  +     V W+A+I+    HG  ++AL     M  +G+  + +T  S
Sbjct: 419 KCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASS 478

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +L ACSH G + EG  YF  + ++FGI+   ++    +DL GRAG L  A + +  MP +
Sbjct: 479 VLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK 538

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
                   LLG C++HG++  G   + R+  ++ EN G YVL++N+YA  G+W+ V ++R
Sbjct: 539 VSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLR 598

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDK 733
              R +G+K+  G SSIE  +K+  F  G+ ++P+  +I  EL  L ++MK   GYVPD 
Sbjct: 599 RYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDT 658

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
             V  DV +D+KE +L  HSE++A+ FG+I+SPP S ++I KNLRVC DCH   K  S+I
Sbjct: 659 RDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKI 718

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T R IIVRD  RFHHF+ GICSCGDYW
Sbjct: 719 TGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 252/512 (49%), Gaps = 9/512 (1%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F+A  ++ MY +      AR++FD +  R++ SW+ ++  Y Q+    EAL++  EM 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            + +S+D  T++S+L  C +  ++  G ++     + G E ++ V+ +LI+++AK G + 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 297 HALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
            A  VF  M   RD++S  ++I AY +      A   +  M+  G++PD  T  ++    
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           +  +   + + +H  I+    F  ++ + NA++ MYAK G +  + ++F  + VKDV+SW
Sbjct: 181 SSPDFLLDGKHIHKHILESKHF-GNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSW 239

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N +I  Y   G   +A  +F  M       P+  T+ SIL A +    L  G  +H R+ 
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGH-TPDIYTFSSILGACASPKRLEDGRMLHVRIT 298

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
                 D  +   L+ M+ +CG ++ A   FY + +     WN +++ +    +G  AL 
Sbjct: 299 ARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALF 358

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            ++ ML EG  PD  TF S++ +C+  G + EG ++ H      G +  +     +V+++
Sbjct: 359 LYKNMLLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVNMY 417

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
            + G L  A      +  + D   W A++ A   HG+ E  A+    L  +         
Sbjct: 418 AKCGSLADAKKSFDGISNK-DVVSWSAMIAASAQHGHAE-EALELSHLMNLQGIAQNEVT 475

Query: 656 LMSNIYA--NVGK-WEGVDEVRSLARDRGLKK 684
             S ++A  + G+ +EG+D    L++D G+++
Sbjct: 476 ASSVLHACSHGGRLYEGIDYFMGLSQDFGIER 507



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 189/416 (45%), Gaps = 33/416 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  ++ S     +     L+  YA  G L  S+  F  +  ++V +WN+MI+ Y   
Sbjct: 190 KHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLY 249

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
           G   +A   F++   T G  PD YTF  +L AC   + L DG+ +H  +   GF+ D  +
Sbjct: 250 GHDKDAFSLFHRMC-TLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAM 308

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ M+ R G    AR+ F  +  ++ G+WN M++ Y Q     +AL +   M LEG 
Sbjct: 309 QNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGF 368

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           + D  T +S++  CA    +  G  IH      G E ++ +   L+NMYAK G +  A +
Sbjct: 369 TPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKK 428

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            FD +  +DVVSW+++IAA  Q      A      M   GI  + +T  S+      L+ 
Sbjct: 429 SFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSV------LHA 482

Query: 361 CRNSRSVHGFIMRRG--WFM-----------EDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           C      HG  +  G  +FM           E+  +G   +D+  + G +  A  V   +
Sbjct: 483 CS-----HGGRLYEGIDYFMGLSQDFGIERDEENTVG--FIDLLGRAGWLKEAEHVLHTM 535

Query: 408 PVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           P K   ++  TL+ G   +G       + + +      NP  G+YV +   Y+  G
Sbjct: 536 PFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENP--GSYVLLNNMYAAAG 589



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 8/179 (4%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  SC  L  ++    +H      G  K V   T LVN YA  G L+ ++ +FD IS
Sbjct: 375 FSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGIS 434

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            ++V +W++MI+   + G   EA++  +   L  G+  +  T   VL AC +   L +G 
Sbjct: 435 NKDVVSWSAMIAASAQHGHAEEALELSHLMNL-QGIAQNEVTASSVLHACSHGGRLYEGI 493

Query: 164 KIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
                + +  G E D       + +  R G    A  +   MP + S      + G C+
Sbjct: 494 DYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCK 552


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/846 (33%), Positives = 436/846 (51%), Gaps = 91/846 (10%)

Query: 27  FSAAANSLQISPDCL-ENESREIDFDD-----LFQSCTKLHHV---KRLHALLVVSGKIK 77
           F ++A SL I  +   E   + + FD        ++CT++  +     +H  L+  G   
Sbjct: 107 FKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDL 166

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
            V+    L+NFY     L  +   F  +       WN  I + ++  +L + V+ F +  
Sbjct: 167 DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ 226

Query: 138 LTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
             S L+ +  T   VL+AC     L   K+IH  V + G + DV +   L+ MY + G  
Sbjct: 227 F-SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKL 285

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQ--------------------------------- 221
            +AR++FD M  R++ SWN+MIS Y                                   
Sbjct: 286 ELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGH 345

Query: 222 --SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
              G   E L+IL  M+ EG   +  ++ S+L   +    +  G   H Y++++G + ++
Sbjct: 346 FLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDV 405

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           +V  +LI+MY K   +  A  VFD M  R++ +WNS+++ Y        A      M++ 
Sbjct: 406 YVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKE 465

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           GI+PDL+T                            W        N ++  YA  G    
Sbjct: 466 GIKPDLVT----------------------------W--------NGMISGYAMWGCGKE 489

Query: 400 ACAVFE-----GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           A AV       GL   +V+SW  LI+G +Q G   ++++ F  M++   + PN  +   +
Sbjct: 490 ALAVLHQTKSLGL-TPNVVSWTALISGSSQAGNNRDSLKFFAQMQQ-EGVMPNSASITCL 547

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A + +  L++G +IH   I+N    DVFVAT L+DMY K   + +A  +F ++   + 
Sbjct: 548 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 607

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
             WN +I    I G G +A++ F +M   GV PD ITF +LL+AC +SGL+ EG +YF  
Sbjct: 608 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDS 667

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M  ++ I P L+HY CMVDL GRAG+L  A + I  MP++PDA+IWGALLG+CRIH N++
Sbjct: 668 MITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLK 727

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
               A+  LF+++  N   Y+LM N+Y+   +WE +D +R L    G++    WS I++N
Sbjct: 728 FAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQIN 787

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
            +V +F +  + HP   KIY EL  L ++MK LGYVPD + V Q+++E EK+ IL SH+E
Sbjct: 788 QRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTE 847

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           +LAI +G+I      PI++ KN R+C DCH+  K+IS +  RE+ +RD  RFHHF++G C
Sbjct: 848 KLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKC 907

Query: 815 SCGDYW 820
           SC D+W
Sbjct: 908 SCNDFW 913



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 181/418 (43%), Gaps = 47/418 (11%)

Query: 259 NILSGL----LIHLYIVKHGLEFNL-FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           N+++ L    ++H  ++K   ++N    + NLI+ Y  FG    A  VF   + R+ + W
Sbjct: 41  NVITSLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKW 100

Query: 314 NSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           NS +  ++ S   +      F  +   G+  D            ++ D      +HG ++
Sbjct: 101 NSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLI 160

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           +RG F  DV +  A+++ Y +   +  A  VF  +P  + + WN  I    Q+    + +
Sbjct: 161 KRG-FDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGV 219

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           E+F+ M + + +     T V +L A   +GAL    +IH  V +  L  DV +   L+ M
Sbjct: 220 ELFRKM-QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISM 278

Query: 493 YGKCGRID-------------------------------DAMSLFYQVPRSSSVP----W 517
           Y K G+++                               DA SLFY++  S   P    W
Sbjct: 279 YSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTW 338

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQ 576
           N ++S H +HG  ++ LN  ++M  EG +P+  +  S+L A S  G ++ G+  + ++++
Sbjct: 339 NCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLR 398

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             F    ++     ++D++ +   L  A     NM  R +   W +L+      G  E
Sbjct: 399 NGFDCDVYVG--TSLIDMYVKNHSLTSAQAVFDNMKNR-NIFAWNSLVSGYSFKGMFE 453


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 267/763 (34%), Positives = 425/763 (55%), Gaps = 12/763 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++ A +VVSG +  V  +  L+  + NL  +  +   FD +  R+  +WN+MIS+Y    
Sbjct: 166 QVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEE 225

Query: 125 RLSEAVDCFYQFT-LTSG-LRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
             S+   CF   + +  G ++PD  T   ++  C +   +  G  IH   +  G    V 
Sbjct: 226 VYSK---CFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVP 282

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLE 238
           +  +L++MY   G  + A  LF +M  RD  SWN MIS Y QS + VEAL+ L ++ + +
Sbjct: 283 LINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTD 342

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
               + +T +S L  C+  + +++G  IH  I++  L+  L + N+L+ MY+K   M   
Sbjct: 343 EGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDT 402

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF+ M   DVVS N +   Y    D   A   F+ M+  GI+P+ +T+++L      L
Sbjct: 403 ERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSL 462

Query: 359 NDCRN-SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            D  +    +H ++ + G  + D  I N+++ MYA  G + S+  +F  +  K VISWN 
Sbjct: 463 GDLHSYGMPLHAYVTQTG-LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNA 521

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I    ++G   EAI++F   +       ++      L + +++ +L +G+++H   +KN
Sbjct: 522 IIAANVRHGRGEEAIKLFMDSQHAGN-KLDRFCLAECLSSSANLASLEEGMQLHGLSVKN 580

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            L  D  V    +DMYGKCG++D  +          +  WN +IS +  +G   +A + F
Sbjct: 581 GLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTF 640

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           + M+  G +PD++TFV+LL+ACSH+GL+ +G  Y++ M   FG+ P +KH  C+VDL GR
Sbjct: 641 KHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGR 700

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
            G    A  FI  MPV P+  IW +LL + R H N+++G  A+  L E+D  +   YVL+
Sbjct: 701 LGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLL 760

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN+YA   +W  VD++RS  +   L K P  S +++ N+V  F  G+R+H   EKIY +L
Sbjct: 761 SNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKL 820

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             +  K++ +GYV D S  L D +E++KEH L +HSE+LA+A+G++  P  S I+IFKNL
Sbjct: 821 DEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNL 880

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCH   K +S +  REI++RD  RFH FK G CSC D+W
Sbjct: 881 RVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 269/571 (47%), Gaps = 10/571 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL   +G +  V+  T L++ Y + G +  ++  F  +  RNV +W +++      G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
           + EA+   Y+     G+  +      V+  C  L D   G ++   V+  G    V VA 
Sbjct: 126 MEEAL-VAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVAN 184

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+ M+        A +LFD M  RD  SWNAMIS Y       +   +L +MR   V  
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKP 244

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T+ S++ VCA SD +  G  IH   V  GL  ++ + N L+NMY+  G +  A  +F
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLF 304

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITA-HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
             M  RDV+SWN++I++Y QSN  + A       +Q     P+ +T  S     +     
Sbjct: 305 RNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEAL 364

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            N R++H  I++R      ++IGN+++ MY+K   +     VFE +P  DV+S N L  G
Sbjct: 365 MNGRTIHAMILQRS-LQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ-GIKIHARVIKNCLC 480
           YA     + A+ VF  M     I PN  T +++      +G L   G+ +HA V +  L 
Sbjct: 424 YAALEDVANAMRVFSWMRGTG-IKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D ++   L+ MY  CG ++ +  +F ++   S + WNAII+ +  HG+G++A+  F   
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              G + D       L++ ++   + EG +  H +  + G+          +D++G+ G 
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQ-LHGLSVKNGLDCDSHVVNATMDMYGKCGK 601

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +      + +   RP    W  L+     +G
Sbjct: 602 MDCMLKTLPDPAHRP-TQCWNTLISGYARYG 631



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 270/561 (48%), Gaps = 28/561 (4%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACRN- 158
           + +R   +W + +S   RCG  S A      FTL   +R        +    ++ AC + 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTA------FTLLRVMRERDVPLSGFALASLVTACEHR 54

Query: 159 -----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
                   G  IH    + G   +V++  +LLH+Y   GL   A++LF +MP R+  SW 
Sbjct: 55  GWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWT 114

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           A++     +G   EAL     MR EGV  +   +A+++ +C   ++ ++GL +  ++V  
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVS 174

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF- 332
           GL  ++ V+N+LI M+     ++ A R+FD+M ERD +SWN++I+ Y  S++ + +  F 
Sbjct: 175 GLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMY--SHEEVYSKCFI 232

Query: 333 -FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
             + M+   ++PD+ TL SL S+ A  +       +H   +  G      +I NA+V+MY
Sbjct: 233 VLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI-NALVNMY 291

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           +  G ++ A ++F  +  +DVISWNT+I+ Y Q+    EA+E    + + +E  PN  T+
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S L A S   AL  G  IHA +++  L   + +   L+ MY KC  ++D   +F  +P 
Sbjct: 352 SSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPC 411

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V  N +   +        A+  F  M   G++P++IT ++L   C   G +      
Sbjct: 412 YDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMP 471

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    + G+         ++ ++   G L  +      +  +   S W A++ A   HG
Sbjct: 472 LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHG 530

Query: 632 NMELGAVASDRLFEVDSENVG 652
             E     + +LF +DS++ G
Sbjct: 531 RGE----EAIKLF-MDSQHAG 546


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/776 (34%), Positives = 427/776 (55%), Gaps = 11/776 (1%)

Query: 53  LFQSCTKLHHVKRLHALL---VVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  SC  L  +   H LL   +  G    V ++  L+  +   GD++ +   F+ ++ R+
Sbjct: 166 VISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERD 225

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
             +WNS+IS   +     E+   F+   L      ++ T   +L  C +   L  GK +H
Sbjct: 226 TISWNSIISANAQNTLHEESFRYFHWMRLVHE-EINYTTLSILLSICGSVDYLKWGKGVH 284

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K G E ++ +  +LL +Y   G +  A  +F  MP RD  SWN+M++ Y Q G  +
Sbjct: 285 GLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCL 344

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            AL +  EM      ++ +T  S L  C   +   +G ++H ++V  GL+  L + N LI
Sbjct: 345 CALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLI 404

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP-DL 345
             Y K   M  A +VF +M + D V+WN++I  +  + +   A   F  M++      D 
Sbjct: 405 TFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDY 464

Query: 346 LTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           +T+V+ L S +   +  +    +H   +  G F  D  + ++++ MYAK G ++S+  +F
Sbjct: 465 ITIVNILGSCLTHEDLIKYGIPIHAHTVVTG-FDLDQHVQSSLITMYAKCGDLHSSSYIF 523

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + L  K    WN +I   A+ G   EA+++   M     I  +Q  + + L   + +  L
Sbjct: 524 DQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAG-IEFDQFNFSTALSVAADLAML 582

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
            +G ++H   IK     D F+    +DMYGKCG +DDA+ +  Q    S + WN +IS  
Sbjct: 583 EEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISIS 642

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             HGQ  KA   F  ML  GV+P+H++FV LL+ACSH GLV EG  Y+  M   +GI+P 
Sbjct: 643 ARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPG 702

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           ++H  CM+DL GR+G L  A  FI  MP+ P+  +W +LL +CRI+ N++LG  A+  L 
Sbjct: 703 IEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLL 762

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           E+D  +   YVL SN++A +G+WE V++VR       ++K P  S ++    + IF  G+
Sbjct: 763 ELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGD 822

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
           +THP+ E+I  +L  L   +   GYVPD S+ LQD +E++KEH + SHSER+A+AFG+I+
Sbjct: 823 QTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLIN 882

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            P  S ++IFKNLRVCGDCH++ KF+S +  R+I++RD  RFHHF +G CSC DYW
Sbjct: 883 IPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 169/574 (29%), Positives = 284/574 (49%), Gaps = 12/574 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           + H   +  G I  VF  T  V+FYA+ G +S ++  F+ +  RNV +W S++  Y   G
Sbjct: 80  QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNG 139

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
              E ++  Y+     G+  +      V+ +C  L+D   G ++    LK G E  V  A
Sbjct: 140 SKKEVINT-YKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAA 198

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ M+   G  N A  +F++M  RD+ SWN++IS   Q+    E+      MRL    
Sbjct: 199 NSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEE 258

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           ++  T++ +L +C   D +  G  +H   VK+GLE N+ + N L+++Y+  G  + A  +
Sbjct: 259 INYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELI 318

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +M ERD++SWNS++A Y Q    + A   F  M     + + +T  S  +        
Sbjct: 319 FRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFF 378

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            N + +HGF++  G   +++IIGN ++  Y K   +  A  VF+ +P  D ++WN LI G
Sbjct: 379 TNGKILHGFVVVLG-LQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGG 437

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA-YSHVGALRQGIKIHARVIKNCLC 480
           +A N   +EA+  F++M E +    +  T V+IL +  +H   ++ GI IHA  +     
Sbjct: 438 FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFD 497

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  V + L+ MY KCG +  +  +F Q+   +S  WNAII+ +  +G G++AL    +M
Sbjct: 498 LDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRM 557

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY--GCMVDLFGRA 598
              G+  D   F + L+  +   ++ EGQ+  H    + G +  L H+     +D++G+ 
Sbjct: 558 RSAGIEFDQFNFSTALSVAADLAMLEEGQQ-LHGSTIKLGFE--LDHFIINAAMDMYGKC 614

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           G L  A   +     R   S W  L+     HG 
Sbjct: 615 GELDDALRILPQPTDRSRLS-WNTLISISARHGQ 647



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 288/551 (52%), Gaps = 15/551 (2%)

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           Y+  G +++++  FD +S RN  +WN M+S YVR G   EAV  F++     G++P  + 
Sbjct: 2   YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAV-LFFRDICGIGIKPSGFM 60

Query: 149 FPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
              ++ AC        +G + H   +K G  +DVFV  S +H Y  +G+ + A+K+F++M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P R+  SW +++  Y  +G+  E ++    MR EG+  +   +A ++  C    +I+ G 
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +  + +K GLE  +  +N+LI M+   G +  A  +F++M ERD +SWNSII+A  Q+ 
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               +  +F  M+    + +  TL  L SI   ++  +  + VHG  ++ G    ++ + 
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYG-LESNICLC 299

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNE 443
           N ++ +Y+  G    A  +F  +P +D+ISWN+++  Y Q+G    A++VF +M+    E
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           I  N  T+ S L A         G  +H  V+   L  ++ +   L+  YGKC ++ +A 
Sbjct: 360 I--NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSLLTAC-SH 561
            +F ++P+   V WNA+I     + + ++A+  F+ M +      D+IT V++L +C +H
Sbjct: 418 KVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTH 477

Query: 562 SGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
             L+  G   + H +   F +  H++    ++ ++ + G L  + ++I +  V   +S+W
Sbjct: 478 EDLIKYGIPIHAHTVVTGFDLDQHVQ--SSLITMYAKCGDL-HSSSYIFDQLVFKTSSVW 534

Query: 621 GALLGACRIHG 631
            A++ A   +G
Sbjct: 535 NAIIAANARYG 545



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 232/476 (48%), Gaps = 8/476 (1%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY +FG  N A+ +FD M  R+  SWN M+SGY + G+ VEA+    ++   G+      
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 247 VASILPVCARSDNIL-SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           +AS++  C +S  +   G   H + +K GL +++FV  + ++ YA +G++ +A ++F++M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            +R+VVSW S++ +Y  +         +  M+  GI  +   +  + S    L D     
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            + G  ++ G     V   N+++ M+   G IN AC++F  +  +D ISWN++I+  AQN
Sbjct: 181 QLLGHALKFG-LETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
            L  E+   F  M   +E   N  T   +L     V  L+ G  +H   +K  L  ++ +
Sbjct: 240 TLHEESFRYFHWMRLVHE-EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              L+ +Y   GR  DA  +F ++P    + WN++++C+   G+   AL  F +ML    
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
             +++TF S L AC      + G +  H      G++  L     ++  +G+   +  A 
Sbjct: 359 EINYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELG-AVASDRLFEVDSENVGYYVLMSNI 660
              Q MP + D   W AL+G      N EL  AVA+ +L    S +   Y+ + NI
Sbjct: 418 KVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNI 470


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/708 (37%), Positives = 407/708 (57%), Gaps = 42/708 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF---GLANVARKLFDDMPVRD 208
           +L+ C+N+   K+IH  ++K G    VFV + L+H +C     G  + A  LF++     
Sbjct: 34  LLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIH-FCAVSPSGDLSYALSLFEENQQHH 92

Query: 209 SGS---WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
             +   WN++I GY  S + + +L +   M   GV  +  T   +   C ++     G  
Sbjct: 93  KHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQ 152

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMR----------------------------- 296
           +H + +K  L FN  V  ++I+MYA  G M                              
Sbjct: 153 LHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGC 212

Query: 297 --HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
              A R+FD++  +DVVSWN++I+ Y QS     A   F  MQ+A + P+  T+V + S 
Sbjct: 213 LDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSA 272

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
                     + +  ++   G F  ++ + NA++DMY K G  + A  +F+G+  KDVIS
Sbjct: 273 CGHTRSGELGKWIGSWVRDNG-FGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVIS 331

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WNT+I GY+   L  EA+ +F++M   N + PN  T++ IL A + +GAL  G  +HA +
Sbjct: 332 WNTMIGGYSYLSLYEEALALFEVMLRSN-VKPNDVTFLGILHACACLGALDLGKWVHAYI 390

Query: 475 IKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
            KN     +  + T L+DMY KCG I+ A  +F  +   +   WNA++S   +HG  ++A
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERA 450

Query: 534 LNFFRQMLDEGV-RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           L  F +M+++G+ RPD ITFV +L+AC+ +GLV  G +YF  M +++GI P L+HYGCM+
Sbjct: 451 LALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMI 510

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DL  RA     A   ++NM + PD +IWG+LL AC+ HG +E G   ++RLF+++ EN G
Sbjct: 511 DLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAG 570

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
            +VL+SNIYA  G+W+ V  +R+   D+G+KK PG +SIE++  V  F  G++ HP+   
Sbjct: 571 AFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNN 630

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           IY  L  +   ++  G+VP+ S VL D++E+ KE  L+ HSE+LAI+FG+I + P + I+
Sbjct: 631 IYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIR 690

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLRVCG+CH+ TK IS+I  REII RD NRFHHFKDG CSC D W
Sbjct: 691 IVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 254/519 (48%), Gaps = 42/519 (8%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISY-- 107
           +L + C  ++  K++H+L++ +G   TVF  +KL++F A    GDLS++   F+      
Sbjct: 33  NLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHH 92

Query: 108 -RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
             NV+ WNS+I  Y        ++  F +  L  G++P+ +TFP + K+C   +   +GK
Sbjct: 93  KHNVFIWNSLIRGYSLSSSPLSSLHLFSRM-LYYGVQPNSHTFPFLFKSCTKAKATHEGK 151

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--------------------------- 196
           ++H   LKL   ++  V  S++HMY   G  +                            
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211

Query: 197 ----ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               AR+LFD++PV+D  SWNAMISGY QSG   EA+    EM+   V  +  T+  +L 
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C  + +   G  I  ++  +G   NL ++N LI+MY K G    A  +FD + E+DV+S
Sbjct: 272 ACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVIS 331

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++I  Y   +    A   F  M ++ ++P+ +T + +    A L      + VH +I 
Sbjct: 332 WNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYID 391

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           +      +  +  +++DMYAK G I +A  VF  +  +++ SWN +++G+A +G A  A+
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERAL 451

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVD 491
            +F  M       P+  T+V +L A +  G +  G +    +I++  +   +    C++D
Sbjct: 452 ALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMID 511

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
           +  +  + ++A  L   +        W +++S    HG+
Sbjct: 512 LLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGR 550



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 165/352 (46%), Gaps = 50/352 (14%)

Query: 50  FDDLFQSCTK---LHHVKRLHA-------------------------------LLVVSGK 75
           F  LF+SCTK    H  K+LHA                               L+     
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++   S T L+  Y + G L  +R  FD I  ++V +WN+MIS YV+ GR  EA+ CFY+
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253

Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
               + + P+  T   VL AC   R+   GK I   V   GF  ++ +  +L+ MYC+ G
Sbjct: 254 MQ-EANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCG 312

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             ++AR+LFD +  +D  SWN MI GY       EAL + + M    V  + +T   IL 
Sbjct: 313 ETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILH 372

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNN------LINMYAKFGMMRHALRVFDQMM 306
            CA    +  G  +H YI K     NL  S+N      LI+MYAK G +  A RVF  M 
Sbjct: 373 ACACLGALDLGKWVHAYIDK-----NLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH 427

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI-QPDLLTLVSLTSIVAQ 357
            R++ SWN++++ +        A   F+ M   G+ +PD +T V + S   Q
Sbjct: 428 SRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQ 479



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 37/419 (8%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFD---QM 305
           L +  +  NI +   IH  I+K GL   +FV + LI+  A    G + +AL +F+   Q 
Sbjct: 32  LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            + +V  WNS+I  Y  S+ P+++   F+ M   G+QP+  T   L     +       +
Sbjct: 92  HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGK 151

Query: 366 SVHGFIMRRGWF------------------------------MEDVIIGNAVVDMYAKLG 395
            +H   ++                                  + D +   A++  Y   G
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            ++ A  +F+ +PVKDV+SWN +I+GY Q+G   EAI  F  M+E N + PN+ T V +L
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEAN-VLPNKSTMVVVL 270

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A  H  +   G  I + V  N    ++ +   L+DMY KCG  D A  LF  +     +
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN +I  +      ++AL  F  ML   V+P+ +TF+ +L AC+  G +  G+     +
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            +      +   +  ++D++ + G +  A    ++M  R  AS W A+L    +HG+ E
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS-WNAMLSGFAMHGHAE 448


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/785 (33%), Positives = 434/785 (55%), Gaps = 22/785 (2%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHISYR 108
           DL +SCT L HV  +HA +  +    ++F    L+  Y  LG    L  +R   D +  R
Sbjct: 7   DLLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAAR-LIDEMPRR 65

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           N  ++N +IS Y R G    A++ F +    +GLR D +T+   L AC   +D   GK +
Sbjct: 66  NAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAV 125

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +  G    VF++ SL  MY   G    AR++FD     D  SWN+++SGY ++G  
Sbjct: 126 HAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAR 185

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSN 283
            E L +   M   G+  +   + SI+  CA   ++   +   +H  +VK GL+ +LF+++
Sbjct: 186 EETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLAS 245

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI------TAHGFFTTMQ 337
            +I+MYAK G + +A+ +F  + + +V+ +N++IA + +    +       A   ++ MQ
Sbjct: 246 AMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQ 305

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
             G+QP   T  S+        +    + +HG +++   F +D  IG+A++D+Y+  G +
Sbjct: 306 SRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHS-FHDDDYIGSALIDLYSDSGCM 364

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                 F  LP +D+++W ++I+G  QN L  +A+ +FQ    C  + P+  T  S++ A
Sbjct: 365 EDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQE-SICYGLKPDLFTMSSVMNA 423

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            + +   R G +I    IK    F+ F A     + M  + G +D     F ++     V
Sbjct: 424 CASLAVARTGEQIQCLAIK--YGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVV 481

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W+A+IS H  HG    AL  F +M++  V P+ +TF+++LTACSH GLV +G RY+ +M
Sbjct: 482 SWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIM 541

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           + E+G+ P +KH  C+VDL GRAG L  A  FI++     DA +W +LL +CRIHG+ME 
Sbjct: 542 KNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMER 601

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G + +D++ +++  +   YV++ N+Y + G+     + R L ++RG+KK PG S IE+ +
Sbjct: 602 GQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRS 661

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            V  F  G+++HP+   IY +L  + +K++ L    + S     +   E ++++  HSE+
Sbjct: 662 GVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSE-QNLVGCHSEK 720

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           +A+AFG+I  P  +PI++ KNLRVC DCH+  K IS    REII+RD  RFHHF+ G CS
Sbjct: 721 IAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHFRGGSCS 780

Query: 816 CGDYW 820
           CGDYW
Sbjct: 781 CGDYW 785


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/699 (37%), Positives = 398/699 (56%), Gaps = 10/699 (1%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     + ++CT+L  V++   LH  +V SG  + V+  T L++FY+  GB+  +R  FD
Sbjct: 37  EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFD 96

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLV 160
            +  +   TW ++I+ Y +CGR   +++ F Q   T+ + PD Y    VL AC     L 
Sbjct: 97  QLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN-VVPDRYVVSSVLSACSMLEFLE 155

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+IH  VL+ G E DV V   L+  Y +       RKLFD M V++  SW  MISGY 
Sbjct: 156 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 215

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+    EA+ +  EM   G   D     S+L  C   + +  G  +H Y +K  LE N F
Sbjct: 216 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEF 275

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V N LI+MYAK  ++  A +VFD M E++V+S+N++I  Y        A   F  M+   
Sbjct: 276 VKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 335

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             P LLT VSL  + A L     S+ +HG I++ G  + D+  G+A++D+Y+K   +  A
Sbjct: 336 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL-DLFAGSALIDVYSKCSYVKDA 394

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE +  KD++ WN +  GY Q+    EA++++  ++   +  PN+ T+ +++ A S+
Sbjct: 395 RHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ-KPNEFTFAALITAASN 453

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + +LR G + H +++K  L F  FV   LVDMY KCG I++A  +F        V WN++
Sbjct: 454 LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSM 513

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS H  HG+ ++AL  FR+M+ EG++P+++TFV++L+ACSH+G V +G  +F+ M   FG
Sbjct: 514 ISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFG 572

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           IKP  +HY C+V L GR+G L  A  FI+ MP+ P A +W +LL ACRI GN+ELG  A+
Sbjct: 573 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAA 632

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +     D ++ G Y+L+SNI+A+ G W  V +VR       + K PG S IEVNNKV++F
Sbjct: 633 EMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVF 692

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
                TH + + I   L  L   +K  GYVPD + +L +
Sbjct: 693 IARXTTHREADMIGSVLDILIQHIKGAGYVPDATALLMN 731



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 204/403 (50%), Gaps = 5/403 (1%)

Query: 223 GNAVEALDI-LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           G + EAL + +D  R  G   +   +AS++  C +   +  G  +H ++V+ G + +++V
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
             +LI+ Y+K G +  A  VFDQ++E+  V+W +IIA Y +      +   F  M++  +
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
            PD   + S+ S  + L      + +H +++RRG  M DV + N ++D Y K   + +  
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM-DVSVVNVLIDFYTKCNRVKAGR 193

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+ + VK++ISW T+I+GY QN    EA+++F  M       P+     S+L +   +
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG-WKPDGFACTSVLTSCGSL 252

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL QG ++HA  IK  L  + FV   L+DMY K   + DA  +F  +   + + +NA+I
Sbjct: 253 EALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMI 312

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
             +    +  +AL  F +M      P  +TFVSLL   S S    E  +  H +  + G+
Sbjct: 313 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKXGV 371

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
              L     ++D++ +  ++  A +  + M  + D  +W A+ 
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMF 413


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/574 (41%), Positives = 361/574 (62%), Gaps = 5/574 (0%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           ++L  C   + +  G +IH  ++      +L + N L+N+YAK G + +A ++FD+M  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL--NDCRNSRS 366
           DVV+W ++I  Y Q + P  A      M + G++P+  TL SL    + +   D    R 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG  +R G +  +V +  A++DMYA+   +  A  +F+ +  K+ +SWN LI GYA+ G
Sbjct: 140 LHGLCLRYG-YDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              +A  +F  M   N + P   TY S+L A + +G+L QG  +HA +IK       FV 
Sbjct: 199 QGDKAFCLFSNMLREN-VKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
             L+DMY K G I+DA  +F ++ +   V WN++++ +  HG G  AL  F +ML   + 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ ITF+ +LTACSH+GL+ EG+ YF MM++ + ++P + HY  MVDL GRAGHL  A  
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQ 376

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
           FI  MP++P A++WGALLGACR+H NMELG  A++ +FE+DS   G +VL+ NIYA  G+
Sbjct: 377 FISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGR 436

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W    +VR + ++ G+KK P  S +E+ N+V +F   +  HP+  +I++    ++ K+K 
Sbjct: 437 WNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKE 496

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
           +GYVPD S VL  +++ E+E  L  HSE+LA+AF ++++PP S I+I KN+R+CGDCH+ 
Sbjct: 497 IGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSA 556

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KF+S++ EREIIVRD+NRFHHF DG CSC DYW
Sbjct: 557 FKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 203/395 (51%), Gaps = 15/395 (3%)

Query: 36  ISPDCLENE-SREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           I   C  N  +REI    L + CT   KL+  K +HALL+ S     +     L+N YA 
Sbjct: 4   IRQQCKNNAGAREI-CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAK 62

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            GDL ++R  FD +S R+V TW ++I+ Y +  R  +A+    +  L  GL+P+ +T   
Sbjct: 63  CGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEM-LRIGLKPNQFTLAS 121

Query: 152 VLKACR-----NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
           +LKA       +++ G+++H   L+ G++ +V+V+ ++L MY R      A+ +FD M  
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           ++  SWNA+I+GY + G   +A  +   M  E V     T +S+L  CA   ++  G  +
Sbjct: 182 KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWV 241

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H  ++K G +   FV N L++MYAK G +  A +VFD++ +RDVVSWNS++  Y Q    
Sbjct: 242 HALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLG 301

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN- 385
             A   F  M +  I P+ +T + + +  +        R  H F M + + +E  I    
Sbjct: 302 KVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR--HYFDMMKKYNVEPQISHYV 359

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
            +VD+  + G ++ A      +P+K   + W  L+
Sbjct: 360 TMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/639 (39%), Positives = 377/639 (58%), Gaps = 4/639 (0%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           +L  Y + G     RK FD+MPV D  SWNA+I+ Y  + +          M L+G++  
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            + ++  L  C  +  I  G  I L I+  G+E    V   L++MY K G    A  VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           +M  RDVV+W++++AAY ++  P  A G F  M   G+ P+ +TLVS     A L D R+
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
              +H  +  +G     V++G A+V++Y K G I +A   F  +  K+V++W+ +   YA
Sbjct: 181 GALMHQRVEAQG-IQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR--VIKNCLCF 481
           +N    +AI V   M+    + PN  T+VS+L A + + AL+QG +IH R  V+   L  
Sbjct: 240 RNDRNRDAIRVLHRMD-LEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLES 298

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV+V T LV+MY KCG +  A  +F ++     V WN++I+ +  HGQ +KAL  F +M 
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMR 358

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
            EG++P  ITF S+L ACSH+G++ +G+++F     + GI P  +H+GCMVDL GRAG +
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWI 418

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             + + + +MP  P    W A LGACR + NM+    A++ LF++D      YVL+SN+Y
Sbjct: 419 VDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMY 478

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A  G+W  V  +R   +     K  G S IEV ++V  F +G+  HP+  +I+ EL+ LT
Sbjct: 479 AKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLT 538

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             MK  GYVPD   VL DV+++ KE ++  HSE+LA+AF ++++P  SPI++ KNLRVC 
Sbjct: 539 KLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCN 598

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH  +KFIS++  REI+VRD NRFH F++G CSCGDYW
Sbjct: 599 DCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 252/502 (50%), Gaps = 17/502 (3%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++ Y+ +G++   R  FD +   ++ +WN++I+ Y+   R  +    F++  L  G+ P
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYI-GNRDFDRCWLFFRGMLLQGINP 59

Query: 145 DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
                   L AC   R +  G+ I  ++L  G E +  V  +L+ MY + G    A  +F
Sbjct: 60  GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
             M  RD  +W+AM++ Y ++G+  EAL +  +M L+GV+ + +T+ S L  CA   ++ 
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           SG L+H  +   G++  + V   L+N+Y K G +  A+  F Q++E++VV+W++I AAY 
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-D 380
           +++    A      M   G+ P+  T VS+    A +   +  R +H      G  +E D
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           V +  A+V+MY+K G +  A  +F+ +   D++ WN+LI   AQ+G   +A+E+F+ M  
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM-R 358

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRI 499
              + P   T+ S+L A SH G L QG K     I +   F +     C+VD+ G+ G I
Sbjct: 359 LEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWI 418

Query: 500 DDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL----NFFRQMLDEGVRPDHITFVS 554
            D+  L   +P     V W A +     +   D+A+    N F+  LD   R  ++   +
Sbjct: 419 VDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQ--LDPRKRAPYVLLSN 476

Query: 555 LLTACSHSGLVSEGQRYFHMMQ 576
           +    + +G  S+  R    MQ
Sbjct: 477 MY---AKAGRWSDVARMRQAMQ 495



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 9/313 (2%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E+       +CT    +   + +   ++ +G  +     T LV+ Y  LG  + +   F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +S+R+V  W++M++ Y R G   EA+  F Q  L  G+ P+  T    L AC +L D  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL-DGVAPNKVTLVSGLDACASLGDLR 179

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G  +H  V   G +  V V  +L+++Y + G    A + F  +  ++  +W+A+ + Y 
Sbjct: 180 SGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYA 239

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH--LYIVKHGLEFN 278
           ++    +A+ +L  M LEG+  +  T  S+L  CA    +  G  IH    ++  GLE +
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           ++V   L+NMY+K G +  A  +FD++   D+V WNS+IA   Q      A   F  M+ 
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359

Query: 339 AGIQPDLLTLVSL 351
            G+QP ++T  S+
Sbjct: 360 EGLQPTIITFTSV 372



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 43  NESREIDFDDLFQSCTKLHHVKRLHA-LLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRH 100
           N +  +   D   +   L   +R+H    V+ G +++ V+  T LVN Y+  G+L+ +  
Sbjct: 262 NSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGD 321

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            FD I++ ++  WNS+I+   + G+  +A++ F +  L  GL+P   TF  VL AC
Sbjct: 322 MFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL-EGLQPTIITFTSVLFAC 376


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/755 (36%), Positives = 426/755 (56%), Gaps = 29/755 (3%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           +  L+  Y+  G +  +R  FD +   R++ +W +M     R G   EA+    +  L S
Sbjct: 82  ANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM-LES 140

Query: 141 GLRPDFYTFPPVLKAC------RNLVDGKKIHCSVLKLGFEW--DVFVAASLLHMYCRFG 192
           GLRP+ +T      AC      R+   G  +    +K GF W  DV V  +L+ M+ R G
Sbjct: 141 GLRPNAFTLCAAAHACFPGELFRS--SGGTVLGFAIKTGF-WGTDVSVGCALIDMFARNG 197

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               ARK+F+ +  R    W  MI+ Y Q G A +A+++   M  +G   D  T++S++ 
Sbjct: 198 DLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVS 257

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM---MRHALRVFDQMMERD 309
            CA   +   G  +H  +++ GL  +  VS  L++MY K  M   M  A +VF +M   +
Sbjct: 258 ACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHN 317

Query: 310 VVSWNSIIAAYEQ-SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           V+SW ++I+ Y Q       A      M    I+P+ LT  SL    A L+D  + R +H
Sbjct: 318 VMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIH 377

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI--TGYAQNG 426
             +M+      +V+ GNA+V MYA+ G +  A   F+ L  ++++S ++ I  TG +   
Sbjct: 378 ARVMKTSIGNVNVV-GNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNAS 436

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
            +S+         E  ++  +  T+ S+L A + VG   +G ++HA  IK     D  ++
Sbjct: 437 WSSQI--------ESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGIS 488

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
             LV MY +CG +DDA   F ++    +V  W +IIS    HG  ++AL+ F  M+  GV
Sbjct: 489 NSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGV 548

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +P+ +T++++L+ACSH GLV EG+ YF  MQ++  + P ++HY CMVDL  R+G +  A 
Sbjct: 549 KPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEAL 608

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
            FI  MP + DA +W  LLGACR + N+E+G +A+  + +++ ++   YVL+SN+YA+ G
Sbjct: 609 EFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGG 668

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
            W+ V  +RSL R R L K  G S + V N +  F  G+ +HP+ ++IY +L  L  ++K
Sbjct: 669 LWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIK 728

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
            +GYVPD S VL D+ +  KE  L  HSE++A+AFG+I++ P  PI+IFKNLRVC DCH+
Sbjct: 729 DIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHS 788

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             K+IS+ T REII+RDSNRFH  KDG CSCG+YW
Sbjct: 789 AIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/532 (29%), Positives = 260/532 (48%), Gaps = 20/532 (3%)

Query: 162 GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGY 219
           G+ +H  +L     + D  VA SLL MY + G    AR++FD M  +RD  SW AM    
Sbjct: 62  GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL-SGLLIHLYIVKHGL-EF 277
            ++G   EAL +L EM   G+  +  T+ +    C   +    SG  +  + +K G    
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           ++ V   LI+M+A+ G +  A +VF+ ++ER VV W  +I  Y Q      A   F  M 
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G +PD  T+ S+ S  A+       + +H  ++R G  + D  +   +VDMY KL + 
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLG-LVSDTCVSCGLVDMYTKLQME 300

Query: 398 NS-ACA--VFEGLPVKDVISWNTLITGYAQ-NGLASEAIEVF-QMMEECNEINPNQGTYV 452
            S  CA  VF+ +P  +V+SW  LI+GY Q  G  + A+E+  +M+ E   I PN  TY 
Sbjct: 301 QSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNE--SIEPNHLTYS 358

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+L A +++     G +IHARV+K  +     V   LV MY + G +++A   F Q+   
Sbjct: 359 SLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYER 418

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
           + +  ++ I   G  G+ + + +   + +D GV     TF SLL+A +  GL ++GQ+  
Sbjct: 419 NLLSTSSDI---GETGRSNASWSSQIESMDVGVST--FTFASLLSAAATVGLPTKGQQ-L 472

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           H +  + G +        +V ++ R G+L  A      M    +   W +++ A   HG+
Sbjct: 473 HALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGH 532

Query: 633 MELG-AVASDRLFEVDSENVGYYVLMSNIYANVG-KWEGVDEVRSLARDRGL 682
            E   ++  D +      N   Y+ + +  ++VG   EG +  RS+ +D  L
Sbjct: 533 AERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRL 584



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 167/377 (44%), Gaps = 24/377 (6%)

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL-PVKDVISWNTLITGYA 423
           R++H  ++       D ++ N+++ MY+K G + +A  VF+G+  ++D++SW  +     
Sbjct: 63  RALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLT 122

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV---GAL--RQGIKIHARVIKNC 478
           +NG   EA+ +   M E   + PN  T    L A +H    G L    G  +    IK  
Sbjct: 123 RNGAEQEALVLLGEMLESG-LRPNAFT----LCAAAHACFPGELFRSSGGTVLGFAIKTG 177

Query: 479 L-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               DV V   L+DM+ + G +  A  +F  +   + V W  +I+ +   G   KA+  F
Sbjct: 178 FWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELF 237

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
             ML++G  PD  T  S+++AC+  G    GQ+  H +    G+         +VD++ +
Sbjct: 238 LGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQ-LHSLVLRLGLVSDTCVSCGLVDMYTK 296

Query: 598 ---AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG-Y 653
                 +  A    + MP     S W AL+      G  E  AV  + L E+ +E++   
Sbjct: 297 LQMEQSMECARKVFKRMPTHNVMS-WTALISGYVQCGGQENNAV--ELLCEMLNESIEPN 353

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           ++  S++          D  R +   R +K + G  ++ V N +   Y  +    +  K 
Sbjct: 354 HLTYSSLLKACANLSDQDSGRQI-HARVMKTSIGNVNV-VGNALVSMYAESGCMEEARKA 411

Query: 714 YDEL--RNLTAKMKSLG 728
           +D+L  RNL +    +G
Sbjct: 412 FDQLYERNLLSTSSDIG 428



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 24/195 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWNSMISVYVR 122
           ++LHAL + +G       S  LV+ Y+  G L  +   FD +    NV +W S+IS   +
Sbjct: 470 QQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAK 529

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------ 176
            G    A+  F+   L SG++P+  T+  VL AC         H  ++K G E+      
Sbjct: 530 HGHAERALSLFHDMIL-SGVKPNDVTYIAVLSACS--------HVGLVKEGKEYFRSMQK 580

Query: 177 DVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEAL 229
           D  +   + H  C      R GL   A +  ++MP + D+  W  ++ G C++   +E  
Sbjct: 581 DHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLL-GACRTYENIEIG 639

Query: 230 DILDEMRLEGVSMDP 244
           +I     ++    DP
Sbjct: 640 EIAARHVIDLEPQDP 654


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/627 (39%), Positives = 373/627 (59%), Gaps = 16/627 (2%)

Query: 207 RDSGS----WNAMISGYC---------QSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
           RD GS    W    S +C          S N+   L +LD +    +  D     ++L  
Sbjct: 24  RDLGSFRRLWQHSESTFCVIDDRNLLRPSLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKR 83

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C +   +  G L+H +++    + +L + N+L+ MYA+ G +  A R+FD+M  RD+VSW
Sbjct: 84  CTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSW 143

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
            S+I  Y Q++    A   F  M   G +P+  TL SL      +      R +H    +
Sbjct: 144 TSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWK 203

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G    +V +G+++VDMYA+ G +  A  VF+ L  K+ +SWN LI GYA+ G   EA+ 
Sbjct: 204 YGCH-SNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALA 262

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  M+      P + TY ++L + S +G L QG  +HA ++K+      +V   L+ MY
Sbjct: 263 LFVRMQR-EGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMY 321

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            K G I DA  +F ++ +   V  N+++  +  HG G +A   F +M+  G+ P+ ITF+
Sbjct: 322 AKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFL 381

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+LTACSH+ L+ EG+ YF +M++ + I+P + HY  +VDL GRAG L  A +FI+ MP+
Sbjct: 382 SVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPI 440

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P  +IWGALLGA ++H N E+GA A+ R+FE+D    G + L++NIYA+ G+WE V +V
Sbjct: 441 EPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKV 500

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R + +D G+KK P  S +EV N V +F   +  HP+ EKI+     L  K+K +GYVPD 
Sbjct: 501 RKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDT 560

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
           S VL  V++ EKE  L  HSE+LA++F ++++PP S I+I KN+RVCGDCH+  K++S +
Sbjct: 561 SHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLV 620

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            +REIIVRD+NRFHHF DG CSCGDYW
Sbjct: 621 VKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 222/436 (50%), Gaps = 20/436 (4%)

Query: 98  SRHTFDHISYRNVY--TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
           S  TF  I  RN+   + NS   ++V      + +DC         L PD   +  +LK 
Sbjct: 36  SESTFCVIDDRNLLRPSLNSKTGLHVL-----DLIDC-------GSLEPDRTLYNTLLKR 83

Query: 156 CRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C  L    +GK +H  VL   F+ D+ +  SLL MY R G    AR+LFD+MP RD  SW
Sbjct: 84  CTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSW 143

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
            +MI+GY Q+  A +AL +   M  +G   +  T++S++  C    +   G  IH    K
Sbjct: 144 TSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWK 203

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
           +G   N+FV ++L++MYA+ G +  A+ VFD++  ++ VSWN++IA Y +  +   A   
Sbjct: 204 YGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALAL 263

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  MQ+ G +P   T  +L S  + +      + +H  +M+    +    +GN ++ MYA
Sbjct: 264 FVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGY-VGNTLLHMYA 322

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G I  A  VF+ L   DV+S N+++ GYAQ+GL  EA + F  M     I PN  T++
Sbjct: 323 KSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG-IEPNDITFL 381

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+L A SH   L +G      + K  +   V     +VD+ G+ G +D A S   ++P  
Sbjct: 382 SVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIE 441

Query: 513 SSVP-WNAIISCHGIH 527
            +V  W A++    +H
Sbjct: 442 PTVAIWGALLGASKMH 457



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 224/451 (49%), Gaps = 22/451 (4%)

Query: 39  DCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           DC   E     ++ L + CT+L  +K    +H  ++ S     +     L+  YA  G L
Sbjct: 66  DCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSL 125

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             +R  FD + +R++ +W SMI+ Y +  R S+A+  F +  L+ G  P+ +T   ++K 
Sbjct: 126 EGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRM-LSDGAEPNEFTLSSLVKC 184

Query: 156 CRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C  +     G++IH    K G   +VFV +SL+ MY R G    A  +FD +  ++  SW
Sbjct: 185 CGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSW 244

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NA+I+GY + G   EAL +   M+ EG      T +++L  C+    +  G  +H +++K
Sbjct: 245 NALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMK 304

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
              +   +V N L++MYAK G +R A +VFD++++ DVVS NS++  Y Q      A   
Sbjct: 305 SSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQ 364

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV----HGFIMRRGWFMEDVIIGNA-V 387
           F  M + GI+P+ +T +S+      L  C ++R +    H F + R + +E  +   A +
Sbjct: 365 FDEMIRFGIEPNDITFLSV------LTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATI 418

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           VD+  + G+++ A +  E +P++  ++ W  L+     +          Q + E +   P
Sbjct: 419 VDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYP 478

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
             GT+  +   Y+  G      K+  +++K+
Sbjct: 479 --GTHTLLANIYASAGRWEDVAKVR-KIMKD 506



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 10/299 (3%)

Query: 30  AANSLQISPDCLEN--ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTK 84
           A+++L + P  L +  E  E     L + C  +      +++HA     G    VF  + 
Sbjct: 156 ASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSS 215

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           LV+ YA  G L  +   FD +  +N  +WN++I+ Y R G   EA+  F +     G RP
Sbjct: 216 LVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQ-REGYRP 274

Query: 145 DFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
             +T+  +L +C +   L  GK +H  ++K   +   +V  +LLHMY + G    A K+F
Sbjct: 275 TEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVF 334

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D +   D  S N+M+ GY Q G   EA    DEM   G+  + IT  S+L  C+ +  + 
Sbjct: 335 DKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLD 394

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            G      + K+ +E  +     ++++  + G++  A    ++M +E  V  W +++ A
Sbjct: 395 EGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 245/592 (41%), Positives = 356/592 (60%), Gaps = 6/592 (1%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           LD+LD   L   +  P    S +  CA+S N+     IH ++       + F+ N+LI+M
Sbjct: 39  LDLLDAGEL---APTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHM 95

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K   +  A  VFDQM  +D+VSW S+IA Y Q++ P+ A G    M +   +P+  T 
Sbjct: 96  YCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTF 155

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            SL        D    R +H   ++ GW  EDV +G+A++DMYA+ G ++ A AVF+ L 
Sbjct: 156 ASLLKAAGAYADSGTGRQIHALAVKCGWH-EDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            K+ +SWN LI+G+A+ G    A+  F  M   N       TY S+  + + +GAL QG 
Sbjct: 215 SKNGVSWNALISGFARKGDGESALMTFAEMLR-NGFEATHFTYSSVFSSIARLGALEQGK 273

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
            +HA VIK+      FV   L+DMY K G + DA  +F +V     V WN++++    +G
Sbjct: 274 WVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYG 333

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +A++ F +M   GV  + ITF+ +LTACSH GLV EG+RYF MM+E + ++P + HY
Sbjct: 334 LGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHY 392

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
             +V L GRAG L  A  FI  MP+ P A++WGALL ACR+H N ++G  A+D +FE+D 
Sbjct: 393 VTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP 452

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           ++ G  VL+ NIYA+ G+W+    VR + +  G+KK P  S +E+ N V +F   + THP
Sbjct: 453 DDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHP 512

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           + E+IY     ++ K++  GYVPD  +VL  V++ EKE  L  HSE+LA+AF +I  P  
Sbjct: 513 QAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAG 572

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + I+I KN+R+CGDCH+  K+IS++  REI+VRD+NRFHHF  G CSCGDYW
Sbjct: 573 ATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 181/367 (49%), Gaps = 8/367 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +++HA L  S      F    L++ Y     +  +R+ FD +  +++ +W S+I+ 
Sbjct: 67  LEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAG 126

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y +     EA+       L    +P+ +TF  +LKA     D   G++IH   +K G+  
Sbjct: 127 YAQNDMPVEAIGLLPGM-LKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHE 185

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           DV+V ++LL MY R G  ++A  +FD +  ++  SWNA+ISG+ + G+   AL    EM 
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEML 245

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G      T +S+    AR   +  G  +H +++K   +   FV N L++MYAK G M 
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMI 305

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A +VFD++  +D+V+WNS++ A+ Q      A   F  M+++G+  + +T + + +  +
Sbjct: 306 DARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACS 365

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGN-AVVDMYAKLGIINSACAVFEGLPVKDVIS- 414
                +  +    F M + + +E  I     VV +  + G++N A      +P++   + 
Sbjct: 366 HGGLVKEGKRY--FEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAV 423

Query: 415 WNTLITG 421
           W  L+  
Sbjct: 424 WGALLAA 430


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/582 (40%), Positives = 359/582 (61%), Gaps = 21/582 (3%)

Query: 254 CARSDNILSGLLI--------------HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           CA  + I+S LLI              H  + K  L  + F+ + L+  Y K G    AL
Sbjct: 35  CATPEAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAL 94

Query: 300 RVFDQMMERDVVSWNSIIAAYEQS-NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
           ++FD M  +D+VSWNS+I+ + +  +  +TA  F+T   +  ++P+ +T++S+ S  +  
Sbjct: 95  KLFDDMPHKDLVSWNSLISGFSRCLHMSLTA--FYTMKFEMSVKPNEVTILSMISACSGA 152

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D    + +HGF ++ G  +E V + N++++MY K G + SAC +FE +P  + +SWN++
Sbjct: 153 LDA--GKYIHGFGIKVGGTLE-VKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I     NG A E I+ F  M     I  ++GT +++L A  H+G  +    IH  +    
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRLG-IEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG 268

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
               + +AT L+D Y K GR+  +  +F +V  +  V W A+++ +  HG G +A+  F 
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFE 328

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M ++G+ PDH+TF  LL+ACSHSGLV+EG+ YF++M E +GI+P + HY CMVDL GR 
Sbjct: 329 SMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC 388

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A+  IQNMP+ P+A +WGALLGACR+HGN+ELG   ++ L  ++  +   Y+++S
Sbjct: 389 GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLS 448

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+Y+    W+   +VR+L ++RGLK+TPG+SSIE  NK   F+ G+R+HP+ EKIY +L 
Sbjct: 449 NMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLE 508

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            L  K++  GY     +VLQDVEE+ KE ++  HSE+LAIAFG++ S     + I KNLR
Sbjct: 509 ELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLR 568

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +CGDCH+  K IS I +R II+RD  RFHHF DG CSC DYW
Sbjct: 569 ICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 218/416 (52%), Gaps = 12/416 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
            + +C ++ + ++IH  V K     D F+   L+  Y + G A  A KLFDDMP +D  S
Sbjct: 48  AVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVS 107

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           WN++ISG+ +  +   +L     M+ E  V  + +T+ S++  C  S  + +G  IH + 
Sbjct: 108 WNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISAC--SGALDAGKYIHGFG 163

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +K G    + V+N+LINMY K G +  A R+F+ + + + VSWNSIIAA   +       
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
            +F  M++ GI+ D  T+++L      L   + + S+HG +   G F   + I  A++D 
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG-FGAKITIATALLDT 282

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           YAKLG ++++  VF  +   D ++W  ++ GYA +GL  EAI++F+ M     + P+  T
Sbjct: 283 YAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMAN-KGLEPDHVT 341

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV--ATCLVDMYGKCGRIDDAMSLFYQ 508
           +  +L A SH G + +G K +  V+      +  V   +C+VD+ G+CG ++DA  +   
Sbjct: 342 FTHLLSACSHSGLVNEG-KSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400

Query: 509 VPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHS 562
           +P   +   W A++    +HG  +        +++ E + P +   +S + + S S
Sbjct: 401 MPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 6/420 (1%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
            SC  + + + +HA +  S   +  F   +LV  Y  LG    +   FD + ++++ +WN
Sbjct: 50  NSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWN 109

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-GKKIHCSVLKLG 173
           S+IS + RC  +S  +  FY       ++P+  T   ++ AC   +D GK IH   +K+G
Sbjct: 110 SLISGFSRCLHMS--LTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGFGIKVG 167

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
              +V VA SL++MY + G    A +LF+ +P  ++ SWN++I+    +G A E +D  +
Sbjct: 168 GTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFN 227

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           +MR  G+  D  T+ ++L  C           IH  +   G    + ++  L++ YAK G
Sbjct: 228 KMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLG 287

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  +  VF ++   D V+W +++A Y        A   F +M   G++PD +T   L S
Sbjct: 288 RLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLS 347

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DV 412
             +        +S    +         V   + +VD+  + G++N A  V + +P++ + 
Sbjct: 348 ACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNA 407

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
             W  L+     +G      EV + +     ++P    Y+ +   YS   + +   K+ A
Sbjct: 408 GVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRN--YIMLSNMYSASRSWKDAAKVRA 465


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/669 (39%), Positives = 393/669 (58%), Gaps = 6/669 (0%)

Query: 156 CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLFDDMPVRDSGSWN 213
           C ++   K+ H  +L+     +   ++ L+        G  N ARKLF  M   D    N
Sbjct: 21  CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICN 80

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
            MI GY +S N  EA+ +   M   GV +D  T   +L  CAR   +  G   H  ++K+
Sbjct: 81  TMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKN 140

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G   +LFV N LI  Y   G    A  VFD+   RDVV+WN +I A+        A    
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200

Query: 334 TTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
             M +   ++PD +T+VSL    AQL +    + +H +    G   E++ + NA++DMY 
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELG-LDENLRVNNAILDMYC 259

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K   I SA  VF  +  KDV+SW ++++G A++G   EA+ +FQ M+  N+I  ++ T V
Sbjct: 260 KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQ-LNKIELDEITLV 318

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
            +L A +  GAL QG  IH  + K  +  D+ + T LVDMY KCG ID A+ +F ++   
Sbjct: 319 GVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 378

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
           +   WNA+I    +HG G+ A++ F QM  + + PD +TF++LL ACSH+GLV EG   F
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 438

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             M+ +F I+P ++HYGC+VDL  RA  +  A  FI+NMP++ ++ +W  LLGACR  G+
Sbjct: 439 QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 498

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
            +L      R+ E++ ++ G YV++SN+YA V +W+   ++R   +++G++KTPG S IE
Sbjct: 499 FDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIE 558

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTS 751
           +N  +  F  G+R+H + E+IY  +  +T ++    G+VP  + VL D+EE+EKEH L  
Sbjct: 559 LNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFL 618

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE+LAIA G+IS+P  SPI+I KNLRVC DCH++ K  S++  REI+ RD +RFHHFK+
Sbjct: 619 HSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKE 678

Query: 812 GICSCGDYW 820
           G CSC D+W
Sbjct: 679 GSCSCMDFW 687



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 167/513 (32%), Positives = 282/513 (54%), Gaps = 15/513 (2%)

Query: 45  SREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTF 102
           ++ I  D L   CT +   K+ HALL+ +  +     S+KL++F A  + GDL+++R  F
Sbjct: 9   TKLISVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLF 68

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD- 161
             +   + +  N+MI  Y R     EAV  +Y F +  G+  D YT+P VL AC  L   
Sbjct: 69  TQMQNPDPFICNTMIRGYARSQNPYEAVSLYY-FMVERGVPVDNYTYPFVLAACARLGAV 127

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G++ HC VLK GF  D+FV  +L+  Y   G    A  +FD+  VRD  +WN MI+ +
Sbjct: 128 KLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAH 187

Query: 220 CQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
              G + +A D+LDEM +L+ +  D +T+ S++P CA+  N+  G  +H Y  + GL+ N
Sbjct: 188 LNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDEN 247

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           L V+N +++MY K   +  A  VF+++ E+DV+SW S+++   +S     A   F  MQ 
Sbjct: 248 LRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQL 307

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             I+ D +TLV + S  AQ       + +H  ++ +     D+++  A+VDMYAK G I+
Sbjct: 308 NKIELDEITLVGVLSACAQTGALDQGKYIH-LLIDKFEINCDLVLETALVDMYAKCGSID 366

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  + V++V +WN LI G A +G   +AI +F  ME  +++ P+  T++++L A 
Sbjct: 367 LALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEH-DKLMPDDVTFIALLCAC 425

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
           SH G + +G+ +  + +KN    +  +    C+VD+  +  ++DDA++    +P +++SV
Sbjct: 426 SHAGLVDEGLAMF-QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSV 484

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
            W  ++      G  D A    R++++  + PD
Sbjct: 485 LWATLLGACRSGGHFDLAEKIGRRVIE--LEPD 515



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 208/430 (48%), Gaps = 11/430 (2%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C +L  VK   R H  ++ +G    +F    L+ FY N G    +   FD  + R+
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
           V TWN MI+ ++  G   +A D   + T    LRPD  T   ++ AC    NL  GK +H
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
               +LG + ++ V  ++L MYC+      A+++F+ +  +D  SW +M+SG  +SG   
Sbjct: 237 SYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQ 296

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  +M+L  + +D IT+  +L  CA++  +  G  IHL I K  +  +L +   L+
Sbjct: 297 EALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALV 356

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MYAK G +  AL+VF +M  R+V +WN++I           A   F  M+   + PD +
Sbjct: 357 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 416

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T ++L    +         ++   +  +      +     VVD+  +   ++ A A  E 
Sbjct: 417 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 476

Query: 407 LPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ-GTYVSILPAYSHVGAL 464
           +P+K + + W TL+ G  ++G   +  E  ++     E+ P+  G YV +   Y+ V   
Sbjct: 477 MPIKANSVLWATLL-GACRSGGHFDLAE--KIGRRVIELEPDSCGRYVMLSNLYAGVSQW 533

Query: 465 RQGIKIHARV 474
              +K+  ++
Sbjct: 534 DHALKLRKQM 543


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/722 (35%), Positives = 415/722 (57%), Gaps = 14/722 (1%)

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDG 162
           S  + +  N +I  +   G L EA    Y+  L +G RPD +TFP V+K C  L    +G
Sbjct: 68  SSPDAFLHNVVIRGFADAG-LPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEG 126

Query: 163 KKIHCSVLKLGFEW-DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           +  H + ++LG    +V+   SLL  Y + G+   A ++FD MPVRD  +WN+M+ GY  
Sbjct: 127 RAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVS 186

Query: 222 SGNAVEALDILDEMRLEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           +G    ALD   EM  EG  V  D + + + L  C     ++ G  +H Y+++HGLE ++
Sbjct: 187 NGLGALALDCFREMH-EGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDV 245

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V  +L++MY K G +  A  +F  M  R VV+WN +I  Y  +  P  A   F  M+  
Sbjct: 246 KVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAE 305

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G Q +++T ++L +  AQ       RSVHG++ R   F+  V++  A+++MY+K+G + S
Sbjct: 306 GHQVEVVTAINLLAACAQTESSLYGRSVHGYVTR-SQFLPHVVLETALLEMYSKVGKVKS 364

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAY 458
           +  +F  +  K ++SWN +I  Y    + +EAI +F  +E  N+ + P+  T  +++PA+
Sbjct: 365 SETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLF--LELLNQPLYPDYFTMSAVVPAF 422

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
             +G LRQ  ++H+ +++     +  V   ++ MY +CG +  +  +F ++     + WN
Sbjct: 423 VLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWN 482

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            II  + IHGQG  AL  F +M   G++P+  TFVS+LTACS SG+  EG   F++MQ +
Sbjct: 483 TIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRD 542

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GI P ++HYGCM DL GRAG L     FI+++P+ P   IWG+LL A R   ++++   
Sbjct: 543 YGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEY 602

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A++R+FE++ +N G YV++S++YA+ G+WE V  +RS   ++GL++T   S +E++    
Sbjct: 603 AAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSC 662

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+ THP+ + I++    L+ K+    Y  + S  +       +  I   HS RLA+
Sbjct: 663 SFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNLSDPISLT--SRRTIIPNKHSVRLAV 720

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
            FG+ISS  ++PI + KN+R+C  CH+  K IS+ + R I+V D+N +H F DG C CGD
Sbjct: 721 VFGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGD 780

Query: 819 YW 820
           YW
Sbjct: 781 YW 782



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/515 (30%), Positives = 266/515 (51%), Gaps = 29/515 (5%)

Query: 20  LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKI 76
           L A+R + +A A      PD          F  + + C +L  ++     H+  +  G +
Sbjct: 92  LAAYRAMLAAGAR-----PD-------RFTFPVVVKCCARLGALEEGRAAHSAAIRLGLV 139

Query: 77  KT-VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
            + V++   L+ FYA LG ++ +   FD +  R++ TWNSM+  YV  G  + A+DCF +
Sbjct: 140 GSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFRE 199

Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                 ++ D       L AC     L+ G+++H  V++ G E DV V  SLL MYC+ G
Sbjct: 200 MHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCG 259

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               A  +F  MP R   +WN MI GY  +G   EA D   +M+ EG  ++ +T  ++L 
Sbjct: 260 AIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLA 319

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            CA++++ L G  +H Y+ +     ++ +   L+ MY+K G ++ +  +F QM  + +VS
Sbjct: 320 ACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVS 379

Query: 313 WNSIIAAY---EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           WN++IAAY   E  N+ IT    F  +    + PD  T+ ++      L   R  R +H 
Sbjct: 380 WNNMIAAYMYKEMYNEAIT---LFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHS 436

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           +I+R   + E+ ++ NAV+ MYA+ G + S+  +F+ +  KDVISWNT+I GYA +G   
Sbjct: 437 YIVRLD-YGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGK 495

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG-IKIHARVIKNCLCFDVFVATC 488
            A+E+F  M+  N + PN+ T+VS+L A S  G   +G I+ +       +   +    C
Sbjct: 496 IALEMFSEMKS-NGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGC 554

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
           + D+ G+ G + + +     +P + +   W ++++
Sbjct: 555 MTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLT 589


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 284/778 (36%), Positives = 420/778 (53%), Gaps = 17/778 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKI-KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           L + C  +   K LH+ +  S  + +  + ++ LV  Y   G L  +   F  I+++++ 
Sbjct: 35  LVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIV 94

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCS 168
            W  +IS YV  G  + A+  F++  L  G+  D   F  VL AC +   L  G+ IH  
Sbjct: 95  LWTVLISAYVSRGHSAAAIALFHRI-LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRC 153

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVE 227
            ++ G      VA++L+ MY R G    A  LF  +    D   WNAMI+   Q+G+  E
Sbjct: 154 AVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPRE 213

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNL 285
           AL+I   M   G+  D +T  S+   C+ S ++ +  +   H  + + GL  ++ V+  L
Sbjct: 214 ALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATAL 273

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +N YA+ G +  A   F  M ER+ VSW S+IAA+ Q    +    F   + + G+ P  
Sbjct: 274 VNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLE-GVVP-- 330

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T  +L + +    D   +R V       G    DV I   +V  YA+      A  VF 
Sbjct: 331 -TRSTLFAALEGCEDLHTARLVEAIAQEIG-VATDVAIVTDLVMAYARCDGQEDAIRVFS 388

Query: 406 GLPVK--DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
                  D      +I  YAQ        +++    E   I+P++  Y++ L A + + A
Sbjct: 389 AREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIE-RGISPDRILYITALDACASLAA 447

Query: 464 LRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           L +G +IHA V  +  L  DV +   +V MYG+CG + DA   F  +P    + WNA++S
Sbjct: 448 LSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLS 507

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
               HG+ +   + FR ML EG   + + F++LL+AC+H+GLV  G  +F  M  + G+ 
Sbjct: 508 ASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVV 567

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HYGCMVDL GR G L  AH  +Q MPV PDA+ W AL+GACRI+G+ E G  A++R
Sbjct: 568 PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAER 627

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + E+ + +   YV + NIY+  G+WE    VR +  D GL+K PG SSIE+ +KV  F  
Sbjct: 628 VLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVV 687

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
            +R+HP+ E IY EL  +   ++  GY      VL DVEE++KE +L  HSE+LAIAFG+
Sbjct: 688 RDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGM 747

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S+P  S +++ KNLRVC DCHN +KFIS++  REI+VRD  RFHHFKDG CSCGDYW
Sbjct: 748 MSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 279/742 (37%), Positives = 403/742 (54%), Gaps = 53/742 (7%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF----YTFPPVLKACRNLVDGKK 164
           ++ TWN  IS ++R G    A+  F      S +  +     Y         R+L D   
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
                     E D+F    +L  Y R      A KLFD MP +D  SWNAM+SGY Q+G 
Sbjct: 105 ----------ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGF 154

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EA ++ ++M       + I+   +L     +  +         + +    + L   N 
Sbjct: 155 VDEAREVFNKM----PHRNSISWNGLLAAYVHNGRLKEARR----LFESQSNWELISWNC 206

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+  Y K  M+  A ++FD+M  RDV+SWN++I+ Y Q  D   A   F    ++ I+ D
Sbjct: 207 LMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN---ESPIR-D 262

Query: 345 LLTLVSLTSIVAQ---LNDCR---------NSRSVHGFIMRRGWFMEDVIIG-------- 384
           + T  ++ S   Q   +++ R         N  S +  +     + + VI G        
Sbjct: 263 VFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPC 322

Query: 385 ------NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
                 N ++  Y + G I  A  +F+ +P +D +SW  +I+GYAQNG   EA+ +F  M
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +   E + N+ T+   L   + + AL  G ++H +V+K       FV   L+ MY KCG 
Sbjct: 383 KRDGE-SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGS 441

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
            D+A  +F  +     V WN +I+ +  HG G +AL  F  M   GV+PD IT V +L+A
Sbjct: 442 TDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSA 501

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSHSGL+  G  YF+ M  ++ +KP  KHY CM+DL GRAG L  A N ++NMP  P A+
Sbjct: 502 CSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAA 561

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
            WGALLGA RIHGN ELG  A++ +F+++ +N G YVL+SN+YA  G+W  V ++RS  R
Sbjct: 562 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMR 621

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
           + G++K  G+S +EV NK+  F  G+  HP+ ++IY  L  L  KM+  GYV     VL 
Sbjct: 622 EAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLH 681

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           DVEE+EKEH+L  HSE+LA+AFGI++ P   PI++ KNLRVC DCHN  K IS+I  R I
Sbjct: 682 DVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLI 741

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           I+RDS+RFHHF +GICSCGDYW
Sbjct: 742 ILRDSHRFHHFSEGICSCGDYW 763



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 148/556 (26%), Positives = 247/556 (44%), Gaps = 92/556 (16%)

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
           V  K   + +  K ++ +   G    +   F+ +  R+  ++N+MIS Y+R  + S A D
Sbjct: 39  VKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARD 98

Query: 132 CF----------YQFTLTSGLR----------------PDFYTFPPVLK--ACRNLVDGK 163
            F          +   LT  +R                 D  ++  +L   A    VD  
Sbjct: 99  LFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEA 158

Query: 164 K---------------------IHCSVLKLG---FE----WDVFVAASLLHMYCRFGLAN 195
           +                     +H   LK     FE    W++     L+  Y +  +  
Sbjct: 159 REVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLG 218

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI----- 250
            AR+LFD MPVRD  SWN MISGY Q G+  +A  + +E  +  V      V+       
Sbjct: 219 DARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGM 278

Query: 251 ----------LPVCAR--SDNILSGLLIHLYIVKHGLEF------NLFVSNNLINMYAKF 292
                     +PV      + +L+G + +  +V  G  F      N+   N +I  Y + 
Sbjct: 279 VDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQN 338

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A ++FD M +RD VSW +II+ Y Q+     A   F  M++ G   +  T     
Sbjct: 339 GGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCAL 398

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           S  A +      + VHG +++ G F     +GNA++ MY K G  + A  VFEG+  KDV
Sbjct: 399 STCADIAALELGKQVHGQVVKAG-FETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDV 457

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +SWNT+I GYA++G   +A+ +F+ M++   + P++ T V +L A SH G + +G +   
Sbjct: 458 VSWNTMIAGYARHGFGRQALVLFESMKKAG-VKPDEITMVGVLSACSHSGLIDRGTEYFY 516

Query: 473 RVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            + ++   ++V       TC++D+ G+ GR+++A +L   +P    +  W A++    IH
Sbjct: 517 SMDRD---YNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIH 573

Query: 528 GQ---GDKALNFFRQM 540
           G    G+KA     +M
Sbjct: 574 GNTELGEKAAEMVFKM 589



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 192/392 (48%), Gaps = 17/392 (4%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++ V S   +++ YA +GDLS ++  F+    R+V+TW +M+S YV+ G + EA   F +
Sbjct: 229 VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             + + +  +       ++  + ++ G+       +    W+  +       Y + G   
Sbjct: 289 MPVKNEISYN-AMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITG-----YGQNGGIA 342

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            ARKLFD MP RD  SW A+ISGY Q+G+  EAL++  EM+ +G S +  T +  L  CA
Sbjct: 343 QARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCA 402

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  +H  +VK G E   FV N L+ MY K G    A  VF+ + E+DVVSWN+
Sbjct: 403 DIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNT 462

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +IA Y +      A   F +M++AG++PD +T+V + S  +  +   +  + + + M R 
Sbjct: 463 MIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSH-SGLIDRGTEYFYSMDRD 521

Query: 376 WFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG---LASE 430
           + ++        ++D+  + G +  A  +   +P      SW  L+     +G   L  +
Sbjct: 522 YNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEK 581

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           A E+   ME       N G YV +   Y+  G
Sbjct: 582 AAEMVFKMEP-----QNSGMYVLLSNLYAASG 608



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 24/176 (13%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H  +V +G     F    L+  Y   G    +   F+ I  ++V +WN+MI+ Y R 
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARH 470

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------D 177
           G   +A+   ++    +G++PD  T   VL AC         H  ++  G E+      D
Sbjct: 471 GFGRQAL-VLFESMKKAGVKPDEITMVGVLSACS--------HSGLIDRGTEYFYSMDRD 521

Query: 178 VFVAASLLHMYC------RFGLANVARKLFDDMPVRDSG--SWNAMISGYCQSGNA 225
             V  +  H  C      R G    A  L  +MP  D G  SW A++      GN 
Sbjct: 522 YNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPF-DPGAASWGALLGASRIHGNT 576


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/651 (40%), Positives = 379/651 (58%), Gaps = 35/651 (5%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A  +F  +   +  SWN MI G+  S + + AL++   M   G+S +  T   +   CA+
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS---- 312
           S     G  IH  I+K+GL  +L V  +LI+MYA+ G++  A +VFD    RDVVS    
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 313 ---------------------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
                                      WN++I+ Y +      A   F  M +  ++PD 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ ++ S      +    R +H +I   G F  ++ + NA++D+Y+K G +  A  +FE
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHG-FGSNLKLVNALIDLYSKCGEMERAHGLFE 269

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           GL  KDVISWNTLI GYA      EA+ VFQ M +  E  PN  T +SILPA +H+GA+ 
Sbjct: 270 GLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGE-TPNDVTMLSILPACAHLGAID 328

Query: 466 QGIKIHARVIKNC--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
            G  IH  + K    +  +  + T L+DMY KCG I+ A  +F  +   S    NA+I  
Sbjct: 329 IGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
             +HG+ D A +   +M  +G+ PD ITFV LL+ACSH+GL   G++ F  M  ++ I+P
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEP 448

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            L+HYGCM+DL GR+G    A   I +M + PD  IWG+LL AC+IH N+ELG + + +L
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKL 508

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            +++ +N G YVL+SNIYA   +W+ V  VR+L  D+GLKK PG SSIE+++ V  F  G
Sbjct: 509 MKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           ++ HP+ ++IY  L  + + +   G+V D S VLQ++EE+ KE  L+ HSE+LAIAFG+I
Sbjct: 569 DKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLI 628

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           S+ P + ++I KNLRVC +CH  TK IS+I +REII RD +RFHHFKDG+C
Sbjct: 629 STKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 241/495 (48%), Gaps = 52/495 (10%)

Query: 78  TVFSSTKLVNF---YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           T ++ +KL++F         L ++   F  I   N  +WN+MI  +        A++  Y
Sbjct: 8   TNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALN-LY 66

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
            + ++ GL P+ YTFP + K+C   +   +GK+IH  +LK G   D+ V  SL+ MY + 
Sbjct: 67  VYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQN 126

Query: 192 GLA-------------------------------NVARKLFDDMPVRDSGSWNAMISGYC 220
           G+                                + A+K+FD++P++D  SWNAMISGY 
Sbjct: 127 GIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYA 186

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           + G   EAL++ +EM    V  D  T+A++L  C  S N+  G  IH +I  HG   NL 
Sbjct: 187 EIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLK 246

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           + N LI++Y+K G M  A  +F+ +  +DV+SWN++I  Y   N    A   F  M + G
Sbjct: 247 LVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLG 306

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR-GWFMEDVIIGNAVVDMYAKLGIINS 399
             P+ +T++S+    A L      R +H +I ++    + +  +  +++DMYAK G I +
Sbjct: 307 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEA 366

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  VF+ +  K + S N +I G+A +G A  A ++   M++ + I P+  T+V +L A S
Sbjct: 367 ANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKK-DGIEPDDITFVGLLSACS 425

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSLFYQVP-RS 512
           H G    G     R I   +  D  +        C++D+ G+ G   +A  L   +    
Sbjct: 426 HAGLSDLG-----RKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEP 480

Query: 513 SSVPWNAIISCHGIH 527
             V W +++    IH
Sbjct: 481 DGVIWGSLLKACKIH 495



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 183/372 (49%), Gaps = 35/372 (9%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  + +A+ VF  + E + +SWN++I  +  S+DPI+A   +  M   G+ P+  T   L
Sbjct: 25  FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFME------------------------------DV 381
               A+    +  + +H  I++ G  ++                              DV
Sbjct: 85  FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A++  YA  G ++ A  +F+ +P+KDV+SWN +I+GYA+ G   EA+E+F  M + 
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            ++ P++ T  ++L   +H G +  G +IH+ +  +    ++ +   L+D+Y KCG ++ 
Sbjct: 205 -DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  +     + WN +I  +       +AL  F++ML  G  P+ +T +S+L AC+H
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAH 323

Query: 562 SGLVSEGQRYFHMMQEE--FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
            G +  G R+ H+  ++   GI  +      ++D++ + G++  A N + +  +    S 
Sbjct: 324 LGAIDIG-RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA-NQVFDTILNKSLSS 381

Query: 620 WGALLGACRIHG 631
             A++    +HG
Sbjct: 382 CNAMIFGFAMHG 393



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 6/282 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T ++  YA+ G++  ++  FD I  ++V +WN+MIS Y   GR  EA++ F + 
Sbjct: 142 RDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            +   ++PD  T   VL  C    N+  G++IH  +   GF  ++ +  +L+ +Y + G 
Sbjct: 202 -MKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGE 260

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +  +D  SWN +I GY    +  EAL +  EM   G + + +T+ SILP 
Sbjct: 261 MERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPA 320

Query: 254 CARSDNILSGLLIHLYIVK--HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+  N  +  +LI+MYAK G +  A +VFD ++ + + 
Sbjct: 321 CAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLS 380

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
           S N++I  +        A    + M++ GI+PD +T V L S
Sbjct: 381 SCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLS 422



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 20/202 (9%)

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
           + G I      T L++ YA  G++  +   FD I  +++ + N+MI  +   GR   A D
Sbjct: 341 LKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFD 400

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKLGFEWDVFVAASLLHMY 188
              +     G+ PD  TF  +L AC +  L D G+KI  S+       D  +   L H  
Sbjct: 401 LLSRMK-KDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSM-----TLDYRIEPKLEHYG 454

Query: 189 C------RFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALDILDEMRLEGVS 241
           C      R GL   A +L + M +   G  W +++   C+    +E  +++ +  ++   
Sbjct: 455 CMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKA-CKIHKNLELGELIAQKLMKIEP 513

Query: 242 MDP---ITVASILPVCARSDNI 260
            +P   + +++I    AR D++
Sbjct: 514 KNPGSYVLLSNIYATSARWDDV 535


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/578 (40%), Positives = 360/578 (62%), Gaps = 3/578 (0%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T    L  CAR  ++  G  +       G + ++FV ++L+++YA++G M  A++VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D+M  RD V+W++++A +  +  P+ A   +  M++ G++ D + ++ +        + R
Sbjct: 167 DRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
              SVHG ++R G  M DV+   ++VDMYAK G+++ AC VF  +  ++ +SW+ +I+G+
Sbjct: 227 MGASVHGHLLRHGMRM-DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           AQNG + EA+ +F+ M+  + I P+ G  VS L A S++G L+ G  +H  +++    F+
Sbjct: 286 AQNGQSDEALRLFRNMQ-ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             + T  +DMY KCG +  A  LF  +     + WNA+I+C G HG+G  AL  F++M +
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G+RPDH TF SLL+A SHSGLV EG+ +F  M   F I P  KHY C+VDL  R+G + 
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A + + +M   P  +IW ALL  C  +  +ELG   +D + E+  ++VG   L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
              KW+ V +VR L +D G KK PG SSIE+      F   +++HP+ E+I  ++  L  
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDL 583

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           +M+ +GY+P   FV  D+EE+ KE  L+ HSE+LAIAFG++++ P + + I KNLRVCGD
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  K+IS+I +REI+VRD+ RFHHFKDG+CSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/471 (32%), Positives = 249/471 (52%), Gaps = 22/471 (4%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV-YV 121
           + RLHALL+VS        S+ L   YA  GDL+ +  T    +  +     + I   + 
Sbjct: 27  LARLHALLIVSSSATHTLISS-LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
           R G  + A+  F    L    RPD  TF   L AC  L D   G+ +       G++ DV
Sbjct: 86  RRGSPASALRVFR--ALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV +SLLH+Y R+G    A K+FD MP RD  +W+ M++G+  +G  ++A+ +   MR +
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           GV  D + +  ++  C  + N+  G  +H ++++HG+  ++  + +L++MYAK G++  A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF  M+ R+ VSW+++I+ + Q+     A   F  MQ +GIQPD   LVS     + +
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
              +  RSVHGFI+RR  F  + I+G A +DMY+K G + SA  +F  +  +D+I WN +
Sbjct: 324 GFLKLGRSVHGFIVRR--FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I     +G   +A+ +FQ M E   + P+  T+ S+L A SH G + +G     ++   C
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETG-MRPDHATFASLLSALSHSGLVEEG-----KLWFGC 435

Query: 479 LC--FDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
           +   F +  A     CLVD+  + G +++A  L   +    +V  W A++S
Sbjct: 436 MVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLS 486


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/785 (34%), Positives = 428/785 (54%), Gaps = 13/785 (1%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           ++ F  +   C KL  +   +++H  ++  G          LV+ Y + G     +  F 
Sbjct: 159 QVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFS 218

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---V 160
            +   +V  W +MI+   + G+  E +  F +  L  G++ +  T+  +++ CRNL    
Sbjct: 219 RMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDL-EGVKANEVTYMSMVEVCRNLDAVK 277

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           +G+ I   +L+  F     +A SL+ +Y + G+ + A+ L + M  RD  +WNAM++   
Sbjct: 278 EGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACA 337

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL-EFNL 279
           Q+G+  EA+ +L  M +EG   + +T  S+L  CA  + +  G  IH  ++  GL +  +
Sbjct: 338 QNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREV 397

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V N++I MY K G    A+ VF+ M  +D VSWN++I A   ++    A   F  M+  
Sbjct: 398 AVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELE 457

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G++ +  TL+SL      L D + +R +H      G+      +GN+VV+MYA+ G +  
Sbjct: 458 GLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLD 517

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQ--NGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           A   F+ L  K +++W+ ++  YAQ  +G    A + FQ ME    I P + T+VS L A
Sbjct: 518 AKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEME-AEGIKPGEVTFVSALDA 576

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
            + +  L  G  +H R   +       V    +++MYGKCG   DA  +F Q+P    + 
Sbjct: 577 CAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS 636

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN++I  +  +G   +AL+  ++ML +G  PD  T VS+L   SH+GL+  G  +F    
Sbjct: 637 WNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSI 696

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV-RPDASIWGALLGACRIHGNMEL 635
           ++ G++P      C+VDL  R G L  A   I   P  + D   W  LL AC+ +G+ + 
Sbjct: 697 QDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQR 756

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G   ++R+FE++ ++ G +V+++N+YA+VG+W     +R +     +KK PG S IE++ 
Sbjct: 757 GIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSG 816

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            V  F +G   HPK  +I ++L  LT +M+  GYVPD + V+ DVEE +KE IL+ HSER
Sbjct: 817 SVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSER 876

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAI FG++S+ P   I++ KNLRVC DCH  TK IS +  REI+VRDS+RFHHFK G CS
Sbjct: 877 LAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCS 936

Query: 816 CGDYW 820
           CGD+W
Sbjct: 937 CGDFW 941



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 183/645 (28%), Positives = 315/645 (48%), Gaps = 13/645 (2%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D   +  +L H +++H+ +V SG    +  S  LVN Y    D+  +   FD +  R+V 
Sbjct: 66  DACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVV 125

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCS 168
           +W +M++VY + G  S+A++C  +     G++P+  TF  ++  C   R L  G+KIH  
Sbjct: 126 SWTAMLAVYAQNGCWSQALECLSRMD-AEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHR 184

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           ++  G E D  +  +L+HMY   G  +  + +F  M       W  MI+G  Q+G   E 
Sbjct: 185 IINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEG 244

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +  +M LEGV  + +T  S++ VC   D +  G +I   I++     +  ++ +LI++
Sbjct: 245 LLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISL 304

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y + G++  A  + + M +RDVV+WN+++ A  Q+ D   A      M   G   + +T 
Sbjct: 305 YGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTY 364

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           +S+    A L      R +H  ++  G    +V +GN+V+ MY K G   +A +VFE +P
Sbjct: 365 LSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP 424

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            KD +SWN +I     N    +A+E+F  M E   +  N+ T +S+L A   +  L+   
Sbjct: 425 RKDDVSWNAVINASVGNSKFQDALELFHGM-ELEGLRSNEFTLLSLLEACGGLEDLKLAR 483

Query: 469 KIHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
           +IHAR        +   V   +V+MY +CG + DA   F  +     V W+ I++ +   
Sbjct: 484 QIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQS 543

Query: 528 --GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
             G G +A  FF++M  EG++P  +TFVS L AC+    +  G+           ++  L
Sbjct: 544 KDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSL 603

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS--DRL 643
                +++++G+ G    A      MP +   S W +L+ A   H    L A++S  + L
Sbjct: 604 VLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS-WNSLIVA-YAHNGHALEALSSLQEML 661

Query: 644 FEVDSENVGYYVLMSNIYANVGKWE-GVDEVRSLARDRGLKKTPG 687
            +    + G  V +    ++ G  E GV+  RS  +D GL+ + G
Sbjct: 662 LQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSG 706



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 251/476 (52%), Gaps = 7/476 (1%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y     ++ +   FD IS +NV++W  M++ Y + G   EA++ F +     G RPD  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQW-EGTRPDKV 59

Query: 148 TFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
            F   L AC     L  G++IH SV+  G   ++ ++ SL++MY +      A K+FD M
Sbjct: 60  VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
            +RD  SW AM++ Y Q+G   +AL+ L  M  EGV  + +T  +I+ VCA+   +  G 
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            IH  I+  GLE +  + N L++MY   G       VF +M +  V+ W ++IA   Q+ 
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                   F  M   G++ + +T +S+  +   L+  +    +   I+    F    ++ 
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESP-FCSSTLLA 298

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            +++ +Y + GI++ A  + E +  +DV++WN ++T  AQNG   EAI + + M +    
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRM-DMEGF 357

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAM 503
             N+ TY+S+L A +++ AL QG +IHARV+    L  +V V   ++ MYGKCG+ + AM
Sbjct: 358 GANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           S+F  +PR   V WNA+I+    + +   AL  F  M  EG+R +  T +SLL AC
Sbjct: 418 SVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 284/587 (48%), Gaps = 29/587 (4%)

Query: 44  ESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           ++ E+ +  + + C  L  VK    + A ++ S    +   +T L++ Y   G L  ++ 
Sbjct: 257 KANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKG 316

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
             +H+  R+V  WN+M++   + G   EA+    +  +  G   +  T+  VL+AC N  
Sbjct: 317 LLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDM-EGFGANKVTYLSVLEACANLE 375

Query: 159 -LVDGKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
            L  G++IH  VL  G  + +V V  S++ MY + G    A  +F+ MP +D  SWNA+I
Sbjct: 376 ALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVI 435

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +    +    +AL++   M LEG+  +  T+ S+L  C   +++     IH      G  
Sbjct: 436 NASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFG 495

Query: 277 FN-LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI--TAHGFF 333
            N   V N+++NMYA+ G +  A + FD + E+ +V+W+ I+AAY QS D     A  FF
Sbjct: 496 GNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFF 555

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M+  GI+P  +T VS     A +    + RS+H      G+    +++GN +++MY K
Sbjct: 556 QEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGK 615

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G  + A  VF+ +P K +ISWN+LI  YA NG A EA+   Q M      +P+ GT VS
Sbjct: 616 CGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEM-LLQGFDPDSGTSVS 674

Query: 454 ILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-- 510
           IL   SH G L +G++   + +  + L        CLVD+  + G +D A  L    P  
Sbjct: 675 ILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPAC 734

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQ 569
           ++ ++ W  +++    +G   + +    ++ +  + P H  +FV L    +  G  S+  
Sbjct: 735 QADTIAWMTLLAACKSYGDPQRGIRCAERVFE--LEPQHSGSFVVLANLYASVGRWSDAS 792

Query: 570 RYFHMMQEEFGIKPHLKHYGCM-VDLFGRAGHLGMAHNFIQNMPVRP 615
           R   MM E   +K   K  GC  ++L G        H FI      P
Sbjct: 793 RIRKMM-ERMSVK---KEPGCSWIELSGS------VHEFISGESKHP 829



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 235/447 (52%), Gaps = 17/447 (3%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY +      A  +FD +  ++  SW  M++ Y Q+G+  EAL++   M+ EG   D + 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
               L  CA S  +  G  IH  +V  GL  N+ +SN+L+NMY K   +  A +VFD M+
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            RDVVSW +++A Y Q+     A    + M   G++P+ +T V++  + A+L      R 
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H  I+  G    D I+GNA+V MY   G  +   +VF  +    V+ W T+I G +QNG
Sbjct: 181 IHHRIINEG-LEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              E + VF+ M +   +  N+ TY+S++    ++ A+++G  I AR++++  C    +A
Sbjct: 240 QYEEGLLVFRKM-DLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           T L+ +YG+CG +D A  L   + +   V WNA+++    +G   +A++  R+M  EG  
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFH-------MMQEEFGIKPHLKHYGCMVDLFGRAG 599
            + +T++S+L AC++   +S+G R  H       ++Q E  +   +      + ++G+ G
Sbjct: 359 ANKVTYLSVLEACANLEALSQG-REIHARVLLCGLLQREVAVGNSV------ITMYGKCG 411

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGA 626
               A +  + MP + D S W A++ A
Sbjct: 412 QTEAAMSVFEAMPRKDDVS-WNAVINA 437


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 287/810 (35%), Positives = 444/810 (54%), Gaps = 32/810 (3%)

Query: 33   SLQISPDCLENESREIDFDDL----FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF 88
            ++Q     +E    E  F  L    + S   L  + +L   ++ SG    ++  + LV+ 
Sbjct: 263  AMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSA 322

Query: 89   YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY- 147
            +A  G L  ++  +  +  RN  T N +I+  V+      A + F     ++ +  D Y 
Sbjct: 323  FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYV 382

Query: 148  ----TFPPVLKACRNLVDGKKIHCSVLKLGFEW-DVFVAASLLHMYCRFGLANVARKLFD 202
                       A + L  G+++H  VL+ G  +  + V+  L++MY + G  + A ++F 
Sbjct: 383  VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ 442

Query: 203  DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
             M  RD  SWN +I+   Q+G    A+     MR   +        S L  CA    + +
Sbjct: 443  LMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAA 502

Query: 263  GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
            G  +H   VK GL  +  VSN L+ MY + G M     +F+ M   DVVSWNSI+     
Sbjct: 503  GQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMAS 562

Query: 323  SNDPITAH-GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            S  PIT     F+ M ++G+ P+ +T V+  + +  L+     + +H  +++ G   ED 
Sbjct: 563  SQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHG-VTEDN 621

Query: 382  IIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVF----- 435
             + NA++  YAK G ++S   +F  +   +D ISWN++I+GY  NG   EA++       
Sbjct: 622  AVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMH 681

Query: 436  --QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
              QMM+ C        T+  +L A + V AL +G+++HA  +++ L  DV V + LVDMY
Sbjct: 682  SEQMMDHC--------TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMY 733

Query: 494  GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
             KCGRID A  +F+ + + +   WN++IS +  HG G KAL  F +M + G  PDH+TFV
Sbjct: 734  SKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFV 793

Query: 554  SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            S+L+ACSH+GLV  G  YF +M E++GI P ++HY C++DL GRAG L     +++ MP+
Sbjct: 794  SVLSACSHAGLVERGLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPM 852

Query: 614  RPDASIWGALLGAC---RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
            +P+  IW  +L AC   +    ++LG  AS  L E++ +N   YVL S  +A +G+WE  
Sbjct: 853  KPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDT 912

Query: 671  DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
             + R+  +   +KK  G S + + + V  F  G+R+HP  ++IY++L  L  K+++ GYV
Sbjct: 913  AKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYV 972

Query: 731  PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
            P   +VL D+EE+ KE +L  HSE+LA+AF +  S    PI+I KNLRVCGDCH   ++I
Sbjct: 973  PLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYI 1032

Query: 791  SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            SQI  R+II+RDS RFHHFKDG CSCGDYW
Sbjct: 1033 SQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 170/594 (28%), Positives = 290/594 (48%), Gaps = 31/594 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LH  +V  G    +F +  LVN YA    L  +R  FD +  RN  +W  +IS +V  
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 124 GRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRN-----LVDGKKIHCSVLKLGFEWD 177
           G   +A   F        G RP  +TF  VL+AC++     L    ++H  V K  F  +
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 178 VFVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
             V  +L+ MY  C  G   +A+++FD  PVRD  +WNA++S Y + G+A+    +   M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 236 RLE--GVSMDPI--TVASILPVCARSDNILSGLLIHLY--IVKHGLEFNLFVSNNLINMY 289
           + +  G+ + P   T  S++     S   L GLL  L+  ++K G   +L+V + L++ +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCSL-GLLDQLFVRVLKSGCSSDLYVGSALVSAF 323

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAY-EQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           A+ GM+  A  ++  + ER+ V+ N +IA   +Q +    A  F      A +  D  T 
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--TY 381

Query: 349 VSLTSIVAQLNDC----RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           V L S +A+ +      R  R VH  ++R G     + + N +V+MYAK G I+ AC VF
Sbjct: 382 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +  +D ISWNT+IT   QNG    A+  + +M + N I P+    +S L + + +G L
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ-NSIGPSNFAAISGLSSCAGLGLL 500

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             G ++H   +K  L  D  V+  LV MYG+CGR+ +   +F  +     V WN+I+   
Sbjct: 501 AAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM--- 557

Query: 525 GIHGQGD----KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           G+         +++  F  M+  G+ P+ +TFV+ L A +   ++  G++  H +  + G
Sbjct: 558 GVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQ-IHSVMLKHG 616

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           +         ++  + ++G +         M  R DA  W +++     +G+++
Sbjct: 617 VTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 280/761 (36%), Positives = 433/761 (56%), Gaps = 19/761 (2%)

Query: 73   SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
            SG ++ ++  + LVN +A  G +  ++  F  +  RN  T N ++    R  +  EA   
Sbjct: 380  SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKV 439

Query: 133  FYQFT-LTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVLKLGF-EWDVFVAASLLH 186
            F +   L                   NL +GK+    +H  + + G  +  + +  +L++
Sbjct: 440  FKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVN 499

Query: 187  MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
            MY +    + A  +F  MP +D+ SWN+MISG   +    EA+     M+  G+     +
Sbjct: 500  MYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFS 559

Query: 247  VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
            V S L  C+    +  G  IH    K GL+ ++ VSN L+ +YA+   +    +VF QM 
Sbjct: 560  VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619

Query: 307  ERDVVSWNSIIAA---YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            E D VSWNS I A   YE S   + A  +F  M QAG +P+ +T +++ + V+  +    
Sbjct: 620  EYDQVSWNSFIGALAKYEAS--VLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGL 677

Query: 364  SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGY 422
               +H  I++     +D  I NA++  Y K   +     +F  +  + D +SWN++I+GY
Sbjct: 678  GHQIHALILKYS-VADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGY 736

Query: 423  AQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
              +G+  +A++ V+ MM+   +++    T+ ++L A + V  L +G+++HA  ++ CL  
Sbjct: 737  LHSGILHKAMDLVWPMMQRGQKLDGF--TFATVLSACASVATLERGMEVHACAVRACLES 794

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            DV V + LVDMY KCG+ID A   F  +P  +   WN++IS +  HG G KAL  F +M 
Sbjct: 795  DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMK 854

Query: 542  DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
              G  PDH+TFV +L+ACSH GLV EG ++F  M E +G+ P ++H+ CMVDL GRAG +
Sbjct: 855  QHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 914

Query: 602  GMAHNFIQNMPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSENVGYYVLMSN 659
                +FI+ MP+ P+  IW  +LGA CR +G N ELG  A+  L E++ +N   YVL+SN
Sbjct: 915  KKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSN 974

Query: 660  IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
            ++A  G WE V E R   R   +KK  G S + + + V +F  G++THP+ EKIY++L+ 
Sbjct: 975  MHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKE 1034

Query: 720  LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
            L  K++  GYVP+  + L D+E + KE +L+ HSE+LAIAF +++   + PI+I KNLRV
Sbjct: 1035 LMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRV 1093

Query: 780  CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            CGDCH   K+IS+I  R+II+RDSNRFHHF  G+CSCGDYW
Sbjct: 1094 CGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 164/595 (27%), Positives = 304/595 (51%), Gaps = 27/595 (4%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D +++ + L+    LH  L  +G    VF    L+N Y  +G+L  +R  FD +  +N+ 
Sbjct: 148 DRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLV 207

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-----LVDGKKIH 166
           +W+ +IS Y +  R+ +     ++  ++SGL P+ +     L+AC+      +  G +IH
Sbjct: 208 SWSCLISGYTQ-NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIH 266

Query: 167 CSVLKLGFEWDVFVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
             + KL    D+ ++  L+ MY  C  G  + A ++FD++  R+S +WN++IS YC+ G+
Sbjct: 267 AFICKLPCVSDMILSNVLMSMYSDCS-GSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGD 325

Query: 225 AVEALDILDEMRLEGVSM----DPITVASIL-PVCARSDN---ILSGLLIHLYIVKHGLE 276
           AV A  +   M++EGV +    +  T+ S++   C+ +D    +L  +L    I K G  
Sbjct: 326 AVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTR--IEKSGFL 383

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            +L+V + L+N +A++G+M  A  +F QM +R+ V+ N ++    + +    A   F  M
Sbjct: 384 RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDC----RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +   ++ +  +LV L S   + ++     R  + VH ++ R G     + IGNA+V+MY 
Sbjct: 444 KDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYG 502

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K   I++AC+VF+ +P KD +SWN++I+G   N    EA+  F  M+  N + P+  + +
Sbjct: 503 KCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKR-NGMVPSNFSVI 561

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S L + S +G L  G +IH    K  L  DV V+  L+ +Y +   I++   +F+Q+P  
Sbjct: 562 STLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY 621

Query: 513 SSVPWNAIISCHGIHGQGD-KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
             V WN+ I     +     +AL +F +M+  G RP+ +TF+++L A S   ++  G + 
Sbjct: 622 DQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQ- 680

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            H +  ++ +         ++  +G+   +         M  R D   W +++  
Sbjct: 681 IHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 6/117 (5%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C  +  ++R   +HA  V +     V   + LV+ YA  G + ++   F+ + 
Sbjct: 764 FATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMP 823

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD 161
            RN+Y+WNSMIS Y R G   +A+  F +     G  PD  TF  VL AC +  LVD
Sbjct: 824 VRNIYSWNSMISGYARHGHGQKALKIFTRMK-QHGQSPDHVTFVGVLSACSHVGLVD 879


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/628 (38%), Positives = 371/628 (59%), Gaps = 20/628 (3%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS----GLLI 266
           SW   I      G+   A+ +   MR    +    +V + LP   +S   L     G  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFG--------------MMRHALRVFDQMMERDVVS 312
           H   ++ G   + F +N L+N+Y K                ++    +VFD+M E+DVVS
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN+++    +S     A G    M + G +PD  TL S+  I A+  D R    +HGF  
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           R G F +DV +G++++DMYA     + +  VF+ LPV+D I WN+++ G AQNG   EA+
Sbjct: 201 RNG-FHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F+ M     I P   T+ S++PA  ++ +L  G ++HA VI+     +VF+++ L+DM
Sbjct: 260 GLFRRMLHSG-IKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCG +  A  +F ++     V W A+I  H +HG   +AL  F +M    ++P+HITF
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           +++LTACSH+GLV +G +YF+ M + +GI P L+H+  + D  GR G L  A+NFI  M 
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK 438

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           ++P AS+W  LL AC++H N  L    + ++F+++  ++G ++++SN Y++ G+W     
Sbjct: 439 IKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAH 498

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           +R   R +G++K P  S IEV NK  +F   +++HP YE+I D L   + +M   GYVP+
Sbjct: 499 LRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPN 558

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
              V QD+EE++K  +L  HSE+LAI FGIIS+PP + I++ KNLRVC DCH  TKFIS+
Sbjct: 559 TDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISK 618

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  REI++RD+NRFHHFKDGICSCGD+W
Sbjct: 619 IVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 185/383 (48%), Gaps = 41/383 (10%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGD--------------LSFSRHTFDHISYRNVY 111
           LHAL + SG     F++  L+N Y  L                L   R  FD +  ++V 
Sbjct: 80  LHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGKKIHCS 168
           +WN+++      GR  EA+    +     G +PD +T     P+     ++  G ++H  
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREM-WRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGF 198

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
             + GF  DVFV +SL+ MY      + + K+FD++PVRD+  WN+M++G  Q+G+  EA
Sbjct: 199 ATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEA 258

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +   M   G+   P+T +S++P C    ++L G  +H Y+++ G + N+F+S++LI+M
Sbjct: 259 LGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDM 318

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G +  A R+FD++   D+VSW ++I  +        A   F  M+   ++P+ +T 
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGW-----------FMEDVIIGNAVVDMYAKLGII 397
           +++      L  C      H  ++ +GW            +  +    A+ D   + G +
Sbjct: 379 LAV------LTACS-----HAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKL 427

Query: 398 NSACAVFEGLPVKDVIS-WNTLI 419
             A     G+ +K   S W+TL+
Sbjct: 428 EEAYNFISGMKIKPTASVWSTLL 450



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 94/245 (38%), Gaps = 55/245 (22%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  L  +C  L  +   K+LHA ++  G    VF S+ L++ Y   G++S +R  FD 
Sbjct: 275 VTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDR 334

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR------- 157
           I   ++ +W +MI  +   G   EA+  F +  L   L+P+  TF  VL AC        
Sbjct: 335 IQSPDIVSWTAMIMGHALHGPAREALVLFDRMEL-GNLKPNHITFLAVLTACSHAGLVDK 393

Query: 158 --------------------------------------NLVDGKKIHCSVLKLGFEWDVF 179
                                                 N + G KI  +       W   
Sbjct: 394 GWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPT----ASVWSTL 449

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           + A  +H         VA+K+FD  P R  GS   + + Y  SG   EA  +   MR +G
Sbjct: 450 LRACKVHKNTVLA-EEVAKKIFDLEP-RSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKG 507

Query: 240 VSMDP 244
           +  +P
Sbjct: 508 MQKEP 512


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/572 (43%), Positives = 354/572 (61%), Gaps = 19/572 (3%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL---------------RVFDQMMERDV 310
           +H   V+ GL+ +L+++N LIN YAKF                      +VFD M  RDV
Sbjct: 132 LHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDV 191

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VSWN++IA + Q+   + A      M + G ++PD  TL S+  I A+  D    + +HG
Sbjct: 192 VSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHG 251

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           + +R G F  DV IG++++DMYAK   +  +   F  LP KD ISWN++I G  QNG   
Sbjct: 252 YAVRNG-FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFD 310

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
             +  F+ M + N + P   ++ S++PA +H+ AL  G ++H  +++     + F+A+ L
Sbjct: 311 RGLGFFRRMLKEN-VKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSL 369

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KCG I  A  +F ++ +   V W AII    +HG    A++ F  ML++GVRP +
Sbjct: 370 VDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCY 429

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           + F+++LTACSH+GLV EG RYF+ M+ +FGI P L+HY  + DL GRAG L  A++FI 
Sbjct: 430 VAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFIS 489

Query: 610 NM-PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           NM  V+P  S+W  LL ACR H ++EL     D+L  VDSEN+G YVLMSNIY+   +W+
Sbjct: 490 NMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWK 549

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
               +R   R +GLKKTP  S IEV N+V  F  G+++HP Y+KI   L  L  +M+  G
Sbjct: 550 DAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEG 609

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YV D + VL DV+E+ K  +L +HSERLAIA+GIIS+   + I++ KN+RVC DCH   K
Sbjct: 610 YVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIK 669

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FI++I  REI VRD++RFHHFK+G CSCGDYW
Sbjct: 670 FITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 205/462 (44%), Gaps = 53/462 (11%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGD------------ 94
           F  L ++ T L H K    LHA  V  G    ++ +  L+N YA   +            
Sbjct: 113 FPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRG 172

Query: 95  ---LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
              +   +  FD +  R+V +WN++I+ + + G   EA+D   +      L+PD +T   
Sbjct: 173 ESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSS 232

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L      VD   GK+IH   ++ GF+ DVF+ +SL+ MY +      + + F  +P +D
Sbjct: 233 ILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKD 292

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           + SWN++I+G  Q+G     L     M  E V    ++ +S++P CA    +  G  +H 
Sbjct: 293 AISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHG 352

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            IV+ G + N F++++L++MYAK G ++ A  VFD++ +RD+V+W +II         + 
Sbjct: 353 CIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALD 412

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-----FMEDVII 383
           A   F  M + G++P         + +A L  C      H  ++  GW        D  I
Sbjct: 413 AVSLFENMLEDGVRP------CYVAFMAVLTACS-----HAGLVDEGWRYFNSMERDFGI 461

Query: 384 G------NAVVDMYAKLGIINSACAVFEGL----PVKDVISWNTLITGYAQNGLASEAIE 433
                   AV D+  + G +  A      +    P   V  W+ L+     +     A +
Sbjct: 462 APGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSV--WSILLAACRAHKSVELAEK 519

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQG--IKIHAR 473
           V   +   +  + N G YV +   YS     +    ++IH R
Sbjct: 520 VLDKLLSVD--SENMGAYVLMSNIYSAAQRWKDAARLRIHMR 559


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/578 (40%), Positives = 360/578 (62%), Gaps = 3/578 (0%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T    L  CAR  ++  G  +       G + ++FV ++L+++YA++G M  A++VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
            +M  RD V+W++++A +  +  P+ A   +  M++ G++ D + ++ +        + R
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
              SVHG ++R G  M DV+   ++VDMYAK G+++ AC VF  +  ++ +SW+ +I+G+
Sbjct: 227 MGASVHGHLLRHGMRM-DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           AQNG + EA+ +F+ M+  + I P+ G  VS L A S++G L+ G  +H  +++    F+
Sbjct: 286 AQNGQSDEALRLFRNMQ-ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             + T  +DMY KCG +  A  LF  +     + WNA+I+C G HG+G  AL  F++M +
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G+RPDH TF SLL+A SHSGLV EG+ +F  M   F I P  KHY C+VDL  R+G + 
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A + + +M   P  +IW ALL  C  +  +ELG   +D + E+  ++VG   L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
              KW+ V +VR L +D G KK PG SSIE+     +F   +++HP+ E+I  ++  L  
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           +M+ +GY+P   FV  D+EE+ KE  L+ HSERLAIAFG++++ P + + I KNLRVCGD
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  K+IS+I +REI+VRD+ RFHHFKDG+CSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/469 (32%), Positives = 248/469 (52%), Gaps = 18/469 (3%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV-YV 121
           + RLHALL+VS        S+ L   YA  GDL+ +  T    +  +     + I   + 
Sbjct: 27  LARLHALLIVSSSASHTLISS-LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
           R G  + A+  F    L    RPD  TF   L AC  L D   G+ +       G++ DV
Sbjct: 86  RRGSPASALRVFR--ALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV +SLLH+Y R+G    A K+F  MP RD  +W+ M++G+  +G  ++A+ +   MR +
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           GV  D + +  ++  C  + N+  G  +H ++++HG+  ++  + +L++MYAK G++  A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF  M+ R+ VSW+++I+ + Q+     A   F  MQ +GIQPD   LVS     + +
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
              +  RSVHGFI+RR  F  + I+G A +DMY+K G + SA  +F  +  +D+I WN +
Sbjct: 324 GFLKLGRSVHGFIVRR--FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I     +G   +A+ +FQ M E   + P+  T+ S+L A SH G + +G     R++ + 
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETG-MRPDHATFASLLSALSHSGLVEEGKLWFGRMVNH- 439

Query: 479 LCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
             F +  A     CLVD+  + G +++A  L   +    +V  W A++S
Sbjct: 440 --FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLS 486


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/582 (40%), Positives = 358/582 (61%), Gaps = 21/582 (3%)

Query: 254 CARSDNILSGLLI--------------HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           CA  + I+S LLI              H  + K  L  + F+ + L+  Y K G    AL
Sbjct: 35  CATPEAIVSALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAL 94

Query: 300 RVFDQMMERDVVSWNSIIAAYEQS-NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
           ++FD M  +D+VSWNS+I+ + +  +  +TA  F+T   +  ++P+ +T++S+ S     
Sbjct: 95  KLFDDMPHKDLVSWNSLISGFSRCLHMSLTA--FYTMKFEMSVKPNEVTILSMISACNGA 152

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D    + +HGF ++ G  +E V + N++++MY K G + SAC +FE +P  + +SWN++
Sbjct: 153 LDA--GKYIHGFGIKVGGTLE-VKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I     NG A E I+ F  M     I  ++GT +++L A  H+G  +    IH  +    
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRLG-IEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG 268

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
               + +AT L+D Y K GR+  +  +F +V  +  V W A+++ +  HG G +A+  F 
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFE 328

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M ++G+ PDH+TF  LL+ACSHSGLV+EG+ YF++M E +GI+P + HY CMVDL GR 
Sbjct: 329 SMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRC 388

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A+  IQNMP+ P+A +WGALLGACR+HGN+ELG   ++ L  ++  +   Y+++S
Sbjct: 389 GLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLS 448

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+Y+    W+   +VR+L ++RGLK+TPG+SSIE  NK   F+ G+R+HP+ EKIY +L 
Sbjct: 449 NMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLE 508

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            L  K++  GY     +VLQDVEE+ KE ++  HSE+LAIAFG++ S     + I KNLR
Sbjct: 509 ELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLR 568

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +CGDCH+  K IS I +R II+RD  RFHHF DG CSC DYW
Sbjct: 569 ICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 218/416 (52%), Gaps = 12/416 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
            + +C ++ + ++IH  V K     D F+   L+  Y + G A  A KLFDDMP +D  S
Sbjct: 48  AVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVS 107

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           WN++ISG+ +  +   +L     M+ E  V  + +T+ S++  C  +  + +G  IH + 
Sbjct: 108 WNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISAC--NGALDAGKYIHGFG 163

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +K G    + V+N+LINMY K G +  A R+F+ + + + VSWNSIIAA   +       
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
            +F  M++ GI+ D  T+++L      L   + + S+HG +   G F   + I  A++D 
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG-FGAKITIATALLDT 282

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           YAKLG ++++  VF  +   D ++W  ++ GYA +GL  EAI++F+ M     + P+  T
Sbjct: 283 YAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMAN-KGLEPDHVT 341

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV--ATCLVDMYGKCGRIDDAMSLFYQ 508
           +  +L A SH G + +G K +  V+      +  V   +C+VD+ G+CG ++DA  +   
Sbjct: 342 FTHLLSACSHSGLVNEG-KSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400

Query: 509 VPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHS 562
           +P   +   W A++    +HG  +        +++ E + P +   +S + + S S
Sbjct: 401 MPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 6/420 (1%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
            SC  + + + +HA +  S   +  F   +LV  Y  LG    +   FD + ++++ +WN
Sbjct: 50  NSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWN 109

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-GKKIHCSVLKLG 173
           S+IS + RC  +S  +  FY       ++P+  T   ++ AC   +D GK IH   +K+G
Sbjct: 110 SLISGFSRCLHMS--LTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVG 167

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
              +V VA SL++MY + G    A +LF+ +P  ++ SWN++I+    +G A E +D  +
Sbjct: 168 GTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFN 227

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           +MR  G+  D  T+ ++L  C           IH  +   G    + ++  L++ YAK G
Sbjct: 228 KMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLG 287

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  +  VF ++   D V+W +++A Y        A   F +M   G++PD +T   L S
Sbjct: 288 RLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLS 347

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DV 412
             +        +S    +         V   + +VD+  + G++N A  V + +P++ + 
Sbjct: 348 ACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNA 407

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
             W  L+     +G      EV + +     ++P    Y+ +   YS   + +   K+ A
Sbjct: 408 GVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRN--YIMLSNMYSASRSWKDAAKVRA 465


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/678 (37%), Positives = 394/678 (58%), Gaps = 37/678 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           ++F   +LL       L +    LF  M  RD  S+NA+I+G+   G+  +A+ +   + 
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130

Query: 237 LEGVSMDP--ITVAS-ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
               S+ P  IT+++ ++   A  D  L G   H  I++ G   N FV + L++MYAK  
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRAL-GKQFHCQILRLGFGANAFVGSPLVDMYAKMS 189

Query: 294 MMRHALRVFDQ-------------------------------MMERDVVSWNSIIAAYEQ 322
           ++  A R FD+                               M +RD ++W +++  + Q
Sbjct: 190 LVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQ 249

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           +     A   F  M+  GI  D  T  S+ +    L+     + +H +I+R   + ++V 
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT-RYDDNVF 308

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G+A+VDMY+K   I  A  VF  +  K++ISW  LI GY QNG + EA+ VF  M+  +
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR-D 367

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            I+P+  T  S++ + +++ +L +G + H   + + L   + V+  LV +YGKCG I+DA
Sbjct: 368 GIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             LF ++     V W A++S +   G+  + ++ F +ML +GV+PD +TF+ +L+ACS +
Sbjct: 428 HRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRA 487

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           G V +G+ YFH MQ++ GI P   HY CM+DL+ R+G L  A  FI+ MP+ PDA  WG 
Sbjct: 488 GFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGT 547

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LL ACR+ G+ME+G  A++ L E+D +N   YVL+ +++A  G+W  V ++R   RDR +
Sbjct: 548 LLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQV 607

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK PG S I+  NKV IF   +++HP  + IY++L  L +KM   GY PD S VL DV +
Sbjct: 608 KKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVAD 667

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
            +K H+++ HSE+LAIAFG+I  P + PI+I KNLRVC DCHN TKFIS+IT R+I+VRD
Sbjct: 668 TDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRD 727

Query: 803 SNRFHHFKDGICSCGDYW 820
           + RFH F DG+CSCGD+W
Sbjct: 728 AVRFHKFSDGVCSCGDFW 745



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 241/488 (49%), Gaps = 41/488 (8%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF-T 137
           +F+   L++  A+   LS     F  ++ R++ ++N++I+ +   G  ++AV  +     
Sbjct: 72  LFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQ 131

Query: 138 LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
             S +RP   T   ++ A   L D   GK+ HC +L+LGF  + FV + L+ MY +  L 
Sbjct: 132 ADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLV 191

Query: 195 -------------NV------------------ARKLFDDMPVRDSGSWNAMISGYCQSG 223
                        NV                  AR+LF+ M  RDS +W  M++G+ Q+G
Sbjct: 192 GDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNG 251

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EAL+I   MR +G+++D  T  SIL  C     +  G  IH YI++   + N+FV +
Sbjct: 252 LESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGS 311

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L++MY+K   ++ A  VF +M  ++++SW ++I  Y Q+     A   F+ MQ+ GI P
Sbjct: 312 ALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D  TL S+ S  A L         H   +  G  M  + + NA+V +Y K G I  A  +
Sbjct: 372 DDYTLGSVISSCANLASLEEGAQFHCLALVSG-LMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +   D +SW  L++GYAQ G A E I++F+ M     + P+  T++ +L A S  G 
Sbjct: 431 FDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM-LAKGVKPDGVTFIGVLSACSRAGF 489

Query: 464 LRQGIKIHARVIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
           + +G      + K+   +  D    TC++D+Y + G++ +A     Q+P    ++ W  +
Sbjct: 490 VEKGRSYFHSMQKDHGIVPIDDHY-TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTL 548

Query: 521 ISCHGIHG 528
           +S   + G
Sbjct: 549 LSACRLRG 556



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 207/448 (46%), Gaps = 46/448 (10%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+ H  ++  G     F  + LV+ YA +  +  ++  FD +  +NV  +N+MI+  +RC
Sbjct: 160 KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRC 219

Query: 124 GRLSEA------------------VDCFYQFTLTS------------GLRPDFYTFPPVL 153
             + EA                  V  F Q  L S            G+  D YTF  +L
Sbjct: 220 KMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSIL 279

Query: 154 KAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
            AC     L  GK+IH  +++  ++ +VFV ++L+ MY +     +A  +F  M  ++  
Sbjct: 280 TACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNII 339

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SW A+I GY Q+G + EA+ +  EM+ +G+  D  T+ S++  CA   ++  G   H   
Sbjct: 340 SWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLA 399

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  GL   + VSN L+ +Y K G +  A R+FD+M   D VSW ++++ Y Q        
Sbjct: 400 LVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETI 459

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M   G++PD +T + + S  ++       RS    + +    +        ++D+
Sbjct: 460 DLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDL 519

Query: 391 YAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINP-N 447
           Y++ G +  A    + +P+  D I W TL++     G     +E+ +   E   EI+P N
Sbjct: 520 YSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG----DMEIGKWAAENLLEIDPQN 575

Query: 448 QGTYVSILP------AYSHVGALRQGIK 469
             +YV +         ++ V  LR+G++
Sbjct: 576 PASYVLLCSMHAAKGQWNEVAQLRRGMR 603



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 9/284 (3%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C   + L   K++HA ++ +     VF  + LV+ Y+    +  +   F  ++
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMT 334

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            +N+ +W ++I  Y + G   EAV  F +     G+ PD YT   V+ +C NL    +G 
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQ-RDGIDPDDYTLGSVISSCANLASLEEGA 393

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           + HC  L  G    + V+ +L+ +Y + G    A +LFD+M   D  SW A++SGY Q G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFG 453

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVS 282
            A E +D+ ++M  +GV  D +T   +L  C+R+  +  G    H     HG+       
Sbjct: 454 RAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513

Query: 283 NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND 325
             +I++Y++ G ++ A     QM M  D + W ++++A     D
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 18/227 (7%)

Query: 42  ENESREIDFDD-----LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLG 93
           E +   ID DD     +  SC  L  ++   + H L +VSG +  +  S  LV  Y   G
Sbjct: 363 EMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
            +  +   FD +S+ +  +W +++S Y + GR  E +D F +  L  G++PD  TF  VL
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM-LAKGVKPDGVTFIGVL 481

Query: 154 KACRN---LVDGKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-D 208
            AC     +  G+    S+ K  G          ++ +Y R G    A +    MP+  D
Sbjct: 482 SACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPD 541

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           +  W  ++S  C+    +E      E  LE   +DP   AS + +C+
Sbjct: 542 AIGWGTLLSA-CRLRGDMEIGKWAAENLLE---IDPQNPASYVLLCS 584


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/630 (38%), Positives = 365/630 (57%), Gaps = 23/630 (3%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGV--SMDPITVASILPVCARSDNILSGLLIHLY 269
           W   I      G+  +A+ +   MR      S  P ++ + L  CA       G  +H  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 270 IVKHGLEFNLFVSNNLINMYAKF-------------------GMMRHALRVFDQMMERDV 310
            ++ G   + F +N L+N+Y K                           +VFD+M+ERDV
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSWN+++    +      A GF   M + G +PD  TL ++  I A+  D +    VHGF
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
             R G F  DV +G++++DMYA     + +  VF+ LPV+D I WN+L+ G AQNG   E
Sbjct: 196 AFRNG-FDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEE 254

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A+ +F+ M +   + P   T+ S++P   ++ +LR G ++HA VI      +VF+++ L+
Sbjct: 255 ALGIFRRMLQAG-VRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMY KCG I  A  +F ++     V W A+I  + +HG   +AL  F +M     +P+HI
Sbjct: 314 DMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TF+++LTACSH+GLV +G +YF  M   +GI P L+H+  + D  GRAG L  A+NFI  
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISK 433

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           M ++P AS+W  LL ACR+H N  L    + ++ E++  ++G +V++SN+Y+  G+W   
Sbjct: 434 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 493

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
             +R   R +G+KK P  S IEV +K+ +F   +R+HP Y++I D L   + +M   G+V
Sbjct: 494 AHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHV 553

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           P+   V QD+EE+ K ++L  HSE+LAI FGIIS+P  + I++ KNLRVC DCH  TKFI
Sbjct: 554 PNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFI 613

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S++ +REI+VRD+NRFHHFKDG CSCGD+W
Sbjct: 614 SKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 232/522 (44%), Gaps = 77/522 (14%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANL-----------------GDLSFS--RHTFDHIS 106
           LHAL + SG     F++  L+N Y  +                    +F   R  FD + 
Sbjct: 72  LHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMI 131

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGK 163
            R+V +WN+++      GR  EA+  F +     G RPD +T     P+   C ++  G 
Sbjct: 132 ERDVVSWNTLVLGCAEEGRHHEALG-FVRKMCREGFRPDSFTLSTVLPIFAECADVKRGL 190

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H    + GF+ DVFV +SL+ MY      + + K+FD++PVRD   WN++++G  Q+G
Sbjct: 191 EVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNG 250

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  EAL I   M   GV   P+T +S++PVC    ++  G  +H Y++  G E N+F+S+
Sbjct: 251 SVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISS 310

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +LI+MY K G +  A  +FD+M   DVVSW ++I  Y        A   F  M+    +P
Sbjct: 311 SLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKP 370

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDMYA 392
           + +T +++      L  C      H  ++ +GW     +  +           A+ D   
Sbjct: 371 NHITFLAV------LTACS-----HAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLG 419

Query: 393 KLGIINSACAVFEGLPVKDVIS-WNTLITG--YAQNGLASEAIEVFQMMEECNEINPNQ- 448
           + G ++ A      + +K   S W+TL+      +N + +E     ++ ++  E+ P   
Sbjct: 420 RAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAE-----EVAKKIMELEPRSI 474

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
           G++V +   YS  G   +   +   + K  +  D             C  I+    L   
Sbjct: 475 GSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD-----------PACSWIEVKSKLHVF 523

Query: 509 VPRSSSVPW-NAIISCHGIHGQGDKALNFF-RQMLDEGVRPD 548
           V    S PW + II           ALN F  QM  EG  P+
Sbjct: 524 VAHDRSHPWYDRIID----------ALNAFSEQMAREGHVPN 555



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 6/272 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           +F  C  +     +H     +G    VF  + L++ YAN     +S   FD++  R+   
Sbjct: 179 IFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHIL 238

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WNS+++   + G + EA+  F +  L +G+RP   TF  ++  C NL     GK++H  V
Sbjct: 239 WNSLLAGCAQNGSVEEALGIFRRM-LQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 297

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  GFE +VF+++SL+ MYC+ G  ++A  +FD M   D  SW AMI GY   G A EAL
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINM 288
            + + M L     + IT  ++L  C+ +  +  G      +  H G+   L     L + 
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADT 417

Query: 289 YAKFGMMRHALRVFDQMMERDVVS-WNSIIAA 319
             + G +  A     +M  +   S W++++ A
Sbjct: 418 LGRAGELDEAYNFISKMQIKPTASVWSTLLRA 449



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 47/241 (19%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  L   C  L  +   K+LHA ++  G    VF S+ L++ Y   G++S +   FD 
Sbjct: 272 VTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDK 331

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD- 161
           +S  +V +W +MI  Y   G   EA+  F +  L +  +P+  TF  VL AC +  LVD 
Sbjct: 332 MSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNA-KPNHITFLAVLTACSHAGLVDK 390

Query: 162 GKKIHCS---------------------------------VLKLGFE-----WDVFVAAS 183
           G K   S                                 + K+  +     W   + A 
Sbjct: 391 GWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRAC 450

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
            +H         VA+K+ +  P R  GS   + + Y  SG   EA  + + MR +G+  D
Sbjct: 451 RVHKNTMLA-EEVAKKIMELEP-RSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKD 508

Query: 244 P 244
           P
Sbjct: 509 P 509


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/702 (35%), Positives = 407/702 (57%), Gaps = 14/702 (1%)

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPP-----VLKACRNLVDGKKIHCSVLKLGFEWDVFV 180
           ++  V C    +LTS        FP      +L+ C+   D +++H  +LK     D  +
Sbjct: 1   MASIVGCLPNISLTS-----ITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPII 55

Query: 181 AASLLHMYCRF--GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
             ++L           + A  +F+ +   +S ++N MI G     +   AL +  +M  +
Sbjct: 56  TEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEK 115

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V  D  T +S+L  C+R   +  G  +H  I+K G + N FV N LI MYA  G +  A
Sbjct: 116 SVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVA 175

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VFD M ER +V+WNS+++ Y ++         F  + +  I+ D +T++S+     +L
Sbjct: 176 RHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRL 235

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            +      +  +I+ +G    +  +  +++DMYAK G +++A  +F+ +  +DV++W+ +
Sbjct: 236 ANLEIGELIGEYIVSKG-LRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAM 294

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+GYAQ     EA+ +F  M++ N + PN+ T VS+L + + +GA   G  +H  + K  
Sbjct: 295 ISGYAQADRCKEALNLFHEMQKGN-VYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 353

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +   V + T L+D Y KCG ID ++ +F ++   +   W A+I     +G+G  AL FF 
Sbjct: 354 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 413

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            ML+  V+P+ +TF+ +L+ACSH+ LV +G+  F+ M+ +F I+P ++HYGCMVD+ GRA
Sbjct: 414 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRA 473

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A+ FI NMP  P+A +W  LL +CR H N+E+   + + +  ++  + G Y+L+S
Sbjct: 474 GFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLS 533

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N YA VG+ E    VRSL +++ +KK PG S IE++  V  F++ +  H   ++I+D L 
Sbjct: 534 NTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 593

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            +  ++K LGYVP+      + EE+ KE  ++ HSE+LAIA+G+I + P++ I+I KNLR
Sbjct: 594 KMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLR 653

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +C DCHN TKFISQ+ ER IIVRD NRFHHFKDG+CSC DYW
Sbjct: 654 MCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 219/436 (50%), Gaps = 18/436 (4%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C+++  ++   ++HAL++ SG     F    L+  YAN G +  +RH FD + 
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            R++  WNSM+S Y + G   E V  F +  L   +  D  T   VL AC    NL  G+
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKI-LELRIEFDDVTMISVLMACGRLANLEIGE 242

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            I   ++  G   +  +  SL+ MY + G  + ARKLFD+M  RD  +W+AMISGY Q+ 
Sbjct: 243 LIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQAD 302

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EAL++  EM+   V  + +T+ S+L  CA      +G  +H YI K  ++  + +  
Sbjct: 303 RCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+ YAK G +  ++ VF +M  ++V +W ++I     + +   A  FF++M +  ++P
Sbjct: 363 QLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKP 422

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGF-IMRRGWFMEDVIIG-NAVVDMYAKLGIINSAC 401
           + +T + + S  +    C   +  H F  MRR + +E  I     +VD+  + G +  A 
Sbjct: 423 NDVTFIGVLSACSHA--CLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY 480

Query: 402 AVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPAY 458
              + +P   + + W TL+        A + IE+ +  +E    + P + G Y+ +   Y
Sbjct: 481 QFIDNMPFPPNAVVWRTLLASCR----AHKNIEMAEKSLEHITRLEPAHSGDYILLSNTY 536

Query: 459 SHVGALRQGIKIHARV 474
           + VG +   I++ + +
Sbjct: 537 ALVGRVEDAIRVRSLI 552


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/619 (40%), Positives = 372/619 (60%), Gaps = 6/619 (0%)

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI---TVASILPVCARSDNIL 261
           P   +  +N ++  +  +G+  +AL +  EM L   S  P    T A  L  C+R   + 
Sbjct: 79  PPLSTPCYNVLMRAFLHAGHPEDALHLFIEM-LHAASACPADQHTAACALKSCSRMCALD 137

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  +  Y VK GL  + FV ++LI+MYA  G +  A  VFD   E  VV WN+I+AAY 
Sbjct: 138 VGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYL 197

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++ D +     F  M + G+  D +TLVS+ +   ++ D +  + V G +   G      
Sbjct: 198 KNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPK 257

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++  A++DMYAK G I  A  +F+G+  +DV++W+ +I+GY Q     EA+ +F  M+  
Sbjct: 258 LV-TALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQ-L 315

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN  T VS+L A + +GAL  G  +H+ V +  L     + T LVD Y KCG IDD
Sbjct: 316 ARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDD 375

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A+  F  +P  +S  W A+I     +G+G +AL  F  M + G+ P  +TF+ +L ACSH
Sbjct: 376 AVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSH 435

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           S LV EG+R+F  M  ++GIKP ++HYGCMVDL GRAG +  A+ FI+ MP+ P+A IW 
Sbjct: 436 SCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWR 495

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL +C +H N+ +G  A  ++  ++  + G YVL+SNIYA+ G+W+    VR   +DRG
Sbjct: 496 ALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRG 555

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           ++KTPG S IE++  V  F+  +  HP+  +IY ++  +  ++K  GYVP+ + V  +VE
Sbjct: 556 IEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVE 615

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E EKE  ++ HSE+LAIAFG++   P + I++ KNLRVC DCH+ TK IS++ +REI+VR
Sbjct: 616 EREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVR 675

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D N FHHFKDG CSC DYW
Sbjct: 676 DRNIFHHFKDGTCSCNDYW 694



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 246/487 (50%), Gaps = 15/487 (3%)

Query: 62  HVKRLHALLVVSGKI----KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           ++ +LHA L+ SG++    K+  S  +       L   + S          +   +N ++
Sbjct: 31  YLPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLM 90

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRP-DFYTFPPVLKACRNLVD---GKKIHCSVLKLG 173
             ++  G   +A+  F +    +   P D +T    LK+C  +     G+ +    +K G
Sbjct: 91  RAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRG 150

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
              D FV +SL+HMY   G    AR +FD         WNA+++ Y ++G+ +E +++  
Sbjct: 151 LVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFK 210

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M   GV+ D +T+ S++  C R  +   G  +  ++ + GL  N  +   L++MYAK G
Sbjct: 211 GMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCG 270

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  A R+FD M  RDVV+W+++I+ Y Q++    A G F+ MQ A ++P+ +T+VS+ S
Sbjct: 271 EIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLS 330

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L      + VH ++ RR       I+G A+VD YAK G I+ A   FE +PVK+  
Sbjct: 331 ACAVLGALETGKWVHSYV-RRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSW 389

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +W  LI G A NG   EA+E+F  M E   I P   T++ +L A SH   + +G +    
Sbjct: 390 TWTALIKGMATNGRGREALELFSSMREAG-IEPTDVTFIGVLMACSHSCLVEEGRRHFDS 448

Query: 474 VIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH---G 528
           + ++  +   V    C+VD+ G+ G +D+A      +P   ++V W A++S   +H   G
Sbjct: 449 MARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVG 508

Query: 529 QGDKALN 535
            G++AL 
Sbjct: 509 IGEEALK 515


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/642 (40%), Positives = 369/642 (57%), Gaps = 35/642 (5%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN M  G+  S + V AL +   M   G+  +  T   +L  CA+      GL IH +++
Sbjct: 31  WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90

Query: 272 KHGLEFNLFVSNNLINMY-------------------------------AKFGMMRHALR 300
           K G E +L+V  +LI+MY                               A  G +  A  
Sbjct: 91  KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD++  +DVVSWN++I+ Y ++ +   A   F  M +  ++PD  T+V++ S  A+   
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R VH +I   G F  ++ I NA++D Y+K G + +AC +F GL  KDVISWN LI 
Sbjct: 211 IELGRQVHSWIADHG-FGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIG 269

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-- 478
           GY    L  EA+ +FQ M    E +PN  T +SIL A +H+GA+  G  IH  + K    
Sbjct: 270 GYTHLNLYKEALLLFQEMLRSGE-SPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKG 328

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +     + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A + F 
Sbjct: 329 VTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFS 388

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M    ++PD ITFV LL+ACSH+G++  G+  F  M   + I P L+HYGCM+DL G +
Sbjct: 389 RMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHS 448

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G    A   I  M + PD  IW +LL AC++HGN+ELG   +  LF+++  N G YVL+S
Sbjct: 449 GLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLS 508

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           NIYA  G+W  V  +R L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY  L 
Sbjct: 509 NIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 568

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P++ + I KNLR
Sbjct: 569 EMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKNLR 628

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           VC +CH  TK IS+I +REII RD  RFHHF+DG+CSC DYW
Sbjct: 629 VCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 254/542 (46%), Gaps = 76/542 (14%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L ++   F+ I   N+  WN+M   +        A+   Y   ++ GL P+ YTFP +LK
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALK-LYVCMISLGLLPNSYTFPFLLK 71

Query: 155 ACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCR--------------------- 190
           +C  L    +G +IH  VLKLG+E D++V  SL+ MY +                     
Sbjct: 72  SCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131

Query: 191 ----------FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
                      G    AR +FD++PV+D  SWNAMISGY ++GN  EAL++  EM    V
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T+ +++   ARS +I  G  +H +I  HG   NL + N LI+ Y+K G M  A  
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F  +  +DV+SWN +I  Y   N    A   F  M ++G  P+ +T++S+    A L  
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311

Query: 361 CRNSRSVHGFIMRRGWFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
               R +H +I +R   + +   +  +++DMY+K G I +A  VF  +  K + +WN +I
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC- 478
            G+A +G A+ A ++F  M + NEI P+  T+V +L A SH G L  G  I   +  N  
Sbjct: 372 FGFAMHGRANAAFDIFSRMRK-NEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYK 430

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +   +    C++D+ G  G   +A  +   +                             
Sbjct: 431 ITPKLEHYGCMIDLLGHSGLFKEAEEMISTMT---------------------------- 462

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP-HLKHYGCMVDLFGR 597
                 + PD + + SLL AC   G V  G+++    Q  F I+P +   Y  + +++  
Sbjct: 463 ------MEPDGVIWCSLLKACKMHGNVELGEKF---AQNLFKIEPNNPGSYVLLSNIYAT 513

Query: 598 AG 599
           AG
Sbjct: 514 AG 515



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 195/401 (48%), Gaps = 37/401 (9%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  + +A+ VF+ + E +++ WN++   +  S DP++A   +  M   G+ P+  T   L
Sbjct: 10  FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFME------------------------------DV 381
               A+L   +    +HG +++ G+ ++                              DV
Sbjct: 70  LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A+V  YA  G I SA  +F+ +PVKDV+SWN +I+GY + G   EA+E+F+ M + 
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N + P++ T V+++ A +  G++  G ++H+ +  +    ++ +   L+D Y KCG ++ 
Sbjct: 190 N-VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  +     + WN +I  +       +AL  F++ML  G  P+ +T +S+L AC+H
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308

Query: 562 SGLVSEGQRYFHMMQEEF--GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
            G +  G R+ H+  ++   G+         ++D++ + G +  AH    +M +      
Sbjct: 309 LGAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPA 366

Query: 620 WGALLGACRIHG--NMELGAVASDRLFEVDSENVGYYVLMS 658
           W A++    +HG  N      +  R  E+  +++ +  L+S
Sbjct: 367 WNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 9/400 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T LV  YA+ G +  +R+ FD I  ++V +WN+MIS YV  G   EA++ F + 
Sbjct: 127 RDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEM 186

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   V+ A     ++  G+++H  +   GF  ++ +  +L+  Y + G 
Sbjct: 187 -MKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGE 245

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF  +  +D  SWN +I GY       EAL +  EM   G S + +T+ SIL  
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+     +  +LI+MY+K G +  A +VF+ M+ + + 
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLP 365

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +WN++I  +        A   F+ M++  I+PD +T V L S  +        R +   +
Sbjct: 366 AWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSM 425

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
                    +     ++D+    G+   A  +   + ++ D + W +L+     +G    
Sbjct: 426 THNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVEL 485

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
             +  Q + +    NP  G+YV +   Y+  G   +  +I
Sbjct: 486 GEKFAQNLFKIEPNNP--GSYVLLSNIYATAGRWNEVARI 523


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/715 (37%), Positives = 401/715 (56%), Gaps = 17/715 (2%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHC 167
           R V  W  + + Y         V  F+QF+      PD           ++L    +IH 
Sbjct: 72  REVAFWLQLFTSY------QSGVPKFHQFSSV----PDLKHLLNNAAKLKSLKHATQIHS 121

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG--SWNAMISGYCQSGNA 225
            ++       +    +LL +Y + G  +    LF+  P   +   +W  +I+   +S   
Sbjct: 122 QLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKP 181

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            +AL   + MR  G+  +  T ++ILP CA +  +  G  IH  I KH    + FV+  L
Sbjct: 182 FQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATAL 241

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MYAK G M  A  VFD+M  R++VSWNS+I  + ++     A G F  +   G  PD 
Sbjct: 242 LDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQ 299

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +++ S+ S  A L +    + VHG I++RG  +  V + N++VDMY K G+   A  +F 
Sbjct: 300 VSISSVLSACAGLVELDFGKQVHGSIVKRG-LVGLVYVKNSLVDMYCKCGLFEDATKLFC 358

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           G   +DV++WN +I G  +     +A   FQ M     + P++ +Y S+  A + + AL 
Sbjct: 359 GGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIR-EGVEPDEASYSSLFHASASIAALT 417

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           QG  IH+ V+K     +  +++ LV MYGKCG + DA  +F +    + V W A+I+   
Sbjct: 418 QGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFH 477

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG  ++A+  F +ML+EGV P++ITFVS+L+ACSH+G + +G +YF+ M     IKP L
Sbjct: 478 QHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGL 537

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HY CMVDL GR G L  A  FI++MP  PD+ +WGALLGAC  H N+E+G   ++RLF+
Sbjct: 538 EHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFK 597

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           ++ +N G Y+L+SNIY   G  E  DEVR L    G++K  G S I+V N+  +F   +R
Sbjct: 598 LEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDR 657

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
           +H + ++IY  L+ L   +K  GYV +  F    VE  E E  L  HSE+LA+AFG++  
Sbjct: 658 SHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSE-EQSLWCHSEKLALAFGLLVL 716

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PP SP++I KNLR CGDCH   KF S+I +REIIVRD NRFH F +G CSC DYW
Sbjct: 717 PPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 275/559 (49%), Gaps = 34/559 (6%)

Query: 49  DFDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR---HTF 102
           D   L  +  KL    H  ++H+ LV +    ++ +   L+  YA  G +  +    +T+
Sbjct: 99  DLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTY 158

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---L 159
            H S  NV TW ++I+   R  +  +A+  F+    T+G+ P+ +TF  +L AC +   L
Sbjct: 159 PHPS-TNVVTWTTLINQLSRSNKPFQALT-FFNRMRTTGIYPNHFTFSAILPACAHAALL 216

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            +G++IH  + K  F  D FVA +LL MY + G   +A  +FD+MP R+  SWN+MI G+
Sbjct: 217 SEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGF 276

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            ++     A+ +  E+   G   D ++++S+L  CA    +  G  +H  IVK GL   +
Sbjct: 277 VKNKLYGRAIGVFREVLSLGP--DQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLV 334

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           +V N+L++MY K G+   A ++F    +RDVV+WN +I    +  +   A  +F  M + 
Sbjct: 335 YVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIRE 394

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G++PD  +  SL    A +        +H  +++ G  +++  I +++V MY K G +  
Sbjct: 395 GVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTG-HVKNSRISSSLVTMYGKCGSMLD 453

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAY 458
           A  VF      +V+ W  +IT + Q+G A+EAI++F+ M   NE + P   T+VS+L A 
Sbjct: 454 AYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM--LNEGVVPEYITFVSVLSAC 511

Query: 459 SHVGALRQGIK-----IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RS 512
           SH G +  G K      +   IK  L        C+VD+ G+ GR+++A      +P   
Sbjct: 512 SHTGKIDDGFKYFNSMANVHNIKPGLEH----YACMVDLLGRVGRLEEACRFIESMPFEP 567

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS-HSGLVSEGQRY 571
            S+ W A++   G H   +       ++    + PD+     LL+      G++ E    
Sbjct: 568 DSLVWGALLGACGKHANVEMGREVAERLFK--LEPDNPGNYMLLSNIYIRHGMLEEADEV 625

Query: 572 FHMMQEEFGIKPHLKHYGC 590
             +M    GI    K  GC
Sbjct: 626 RRLM----GINGVRKESGC 640


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/676 (36%), Positives = 388/676 (57%), Gaps = 34/676 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM- 235
           ++F   +LL       L     +LF  MP RD+ S+NA+I+G+  +G+   ++ +   + 
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           R E V    IT+++++ V +   +   G  +H  +++ G     FV + L++MYAK G++
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 296 RHALRVFDQ-------------------------------MMERDVVSWNSIIAAYEQSN 324
           R A RVF +                               M++RD ++W +++    Q+ 
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             + A   F  M+  G+  D  T  S+ +    L      + +H +I R  W+ ++V +G
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT-WYEDNVFVG 316

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           +A+VDMY+K   I  A AVF  +  +++ISW  +I GY QN  + EA+  F  M + + I
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-QMDGI 375

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P+  T  S++ + +++ +L +G + H   + + L   + V+  LV +YGKCG I+DA  
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           LF ++     V W A+++ +   G+  + ++ F +ML  G++PD +TF+ +L+ACS +GL
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGL 495

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V +G  YF  MQ++ GI P   HY CM+DL+ R+G    A  FI+ MP  PDA  W  LL
Sbjct: 496 VEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            +CR+ GNME+G  A++ L E D +N   YVL+ +++A  G+W  V  +R   RDR +KK
Sbjct: 556 SSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKK 615

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S I+  NKV IF   +++HP   +IY++L  L +KM   GY PD S VL DV + +
Sbjct: 616 EPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADAD 675

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K H+++ HSE+LAIAFG+I  P + PI+I KNLRVC DCHN TKFIS+IT R+I+VRD+ 
Sbjct: 676 KVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAV 735

Query: 805 RFHHFKDGICSCGDYW 820
           RFH F DG CSCGD+W
Sbjct: 736 RFHKFSDGTCSCGDFW 751



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 221/464 (47%), Gaps = 40/464 (8%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F  +  R+  ++N++I+ +   G  + +V  +        +RP   T   ++     L D
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 162 ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV------------ 206
              G  +HC VL+LGF    FV + L+ MY + GL   AR++F +M              
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 207 -------------------RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 247
                              RDS +W  M++G  Q+G  +EALD+   MR EGV +D  T 
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
            SIL  C     +  G  IH YI +   E N+FV + L++MY+K   +R A  VF +M  
Sbjct: 282 GSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R+++SW ++I  Y Q+     A   F+ MQ  GI+PD  TL S+ S  A L         
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQF 401

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H   +  G  M  + + NA+V +Y K G I  A  +F+ +   D +SW  L+TGYAQ G 
Sbjct: 402 HCLALVSG-LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN--CLCFDVFV 485
           A E I++F+ M   N + P+  T++ +L A S  G + +G      + K+   +  D   
Sbjct: 461 AKETIDLFEKM-LANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY 519

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHG 528
            TC++D+Y + GR  +A     Q+P S  +  W  ++S   + G
Sbjct: 520 -TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 202/423 (47%), Gaps = 68/423 (16%)

Query: 266 IHLYIVKHGLEFN-LFVSNNLINMYAKFGMMRHALRVFDQ-------------------- 304
           +H  I+K  L+    F+ N+L+  YAK G +  A RVFD+                    
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 305 -----------MMERDVVSWNSIIAAYEQSNDPITAHGFFTT-MQQAGIQPDLLTLVSLT 352
                      M ERD VS+N++I  +  +  P  +   +   +++  ++P  +TL ++ 
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-- 410
            + + L+D     SVH  ++R G F     +G+ +VDMYAK+G+I  A  VF+ +  K  
Sbjct: 154 MVASALSDRALGHSVHCQVLRLG-FGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 411 -----------------------------DVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
                                        D I+W T++TG  QNGL  EA++VF+ M   
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RA 271

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             +  +Q T+ SIL A   + AL +G +IHA + +     +VFV + LVDMY KC  I  
Sbjct: 272 EGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A ++F ++   + + W A+I  +G +   ++A+  F +M  +G++PD  T  S++++C++
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
              + EG + FH +    G+  ++     +V L+G+ G +  AH     M      S W 
Sbjct: 392 LASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WT 449

Query: 622 ALL 624
           AL+
Sbjct: 450 ALV 452



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 193/437 (44%), Gaps = 54/437 (12%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC--------------- 123
            F  + LV+ YA +G +  +R  F  +  + V  +N++I+  +RC               
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD 240

Query: 124 ----------------GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKK 164
                           G   EA+D F +     G+  D YTF  +L AC  L    +GK+
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMR-AEGVGIDQYTFGSILTACGALAALEEGKQ 299

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  + +  +E +VFV ++L+ MY +     +A  +F  M  R+  SW AMI GY Q+  
Sbjct: 300 IHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC 359

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           + EA+    EM+++G+  D  T+ S++  CA   ++  G   H   +  GL   + VSN 
Sbjct: 360 SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA 419

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+ +Y K G +  A R+FD+M   D VSW +++  Y Q          F  M   G++PD
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPD 479

Query: 345 LLTLVSLTS------IVAQLNDCRNS-RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            +T + + S      +V +  D  +S +  HG +     +         ++D+Y++ G  
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHY-------TCMIDLYSRSGRF 532

Query: 398 NSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             A    + +P   D   W TL++     G         + + E +  NP     +  + 
Sbjct: 533 KEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMH 592

Query: 457 A----YSHVGALRQGIK 469
           A    ++ V  LR+G++
Sbjct: 593 AAKGQWTEVAHLRRGMR 609


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/781 (34%), Positives = 431/781 (55%), Gaps = 41/781 (5%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           +F    L++ Y  LG +  +   F  +S  NV ++ ++IS + +     EAV+ F+   L
Sbjct: 130 IFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAM-L 188

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
            SG+ P+ YTF  +L AC   +D   G ++H  V+KLG    VF+  +L+ +YC+ G  +
Sbjct: 189 DSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLD 248

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVC 254
           +  +LF++MP RD  SWN +IS   +     EA D    M+L +G+ +D  +++++L  C
Sbjct: 249 LVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTAC 308

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK----------------------- 291
           A S   + G  +H   +K GLE +L VS++LI  Y K                       
Sbjct: 309 AGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWT 368

Query: 292 --------FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
                   FGM+  A+ VF++M +R+ +S+N+++A   +++D   A   F  M + G++ 
Sbjct: 369 GMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEI 428

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              TL S+ +    L   + S+ + GF+M+ G  + +  I  A+VDMY + G +  A  +
Sbjct: 429 SDCTLTSIITACGLLKSFKVSQQIQGFVMKFG-ILSNSCIETALVDMYTRCGRMEDAEKI 487

Query: 404 FEGLPVKD--VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
           F    +++       ++I GYA+NG  +EAI +F   +    I  ++    SIL     +
Sbjct: 488 FYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSI 547

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G    G+++H   +K+ L  +  V    V MY KC  +DDA+ +F  +     V WN ++
Sbjct: 548 GFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLV 607

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS--GLVSEGQRYFHMMQEEF 579
           + H +H QGDKAL  +++M   G++PD ITF  +++A  H+   LV   +  F  M+ E 
Sbjct: 608 AGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEH 667

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            IKP L+HY   + + GR G L  A   I+NMP+ PD  +W ALL +CRI+ N  L  +A
Sbjct: 668 NIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLA 727

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           +  +  V+ ++   Y+L SN+Y+  G+W   ++VR   R++G +K P  S I   NK+  
Sbjct: 728 ARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHS 787

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           FY  +R+HP+ + IY  L  L  +   +GYVPD SFVLQ+VEE +K+  L  HS +LA  
Sbjct: 788 FYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAAT 847

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FGI+ + P  PIQI KN+R+CGDCHN+ K++S +T R+I++RD++ FH F DG CSC DY
Sbjct: 848 FGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDY 907

Query: 820 W 820
           W
Sbjct: 908 W 908



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 241/512 (47%), Gaps = 43/512 (8%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            + +H   LKL  E D+F+  +L+  Y + GL   A K+F  +   +  S+ A+ISG+ +
Sbjct: 116 ARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           S    EA+++   M   G+  +  T  +IL  C R+ +   G  +H  +VK GL   +F+
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AG 340
            N L+ +Y K G +   LR+F++M ERD+ SWN++I++  +      A  +F  MQ   G
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++ D  +L +L +  A        + +H   ++ G     + + ++++  Y K G  N  
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVG-LESHLSVSSSLIGFYTKCGSANDV 352

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN------------- 447
             +FE +P++DVI+W  +IT Y + G+   A+EVF  M + N I+ N             
Sbjct: 353 TDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGS 412

Query: 448 -----------QG------TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
                      +G      T  SI+ A   + + +   +I   V+K  +  +  + T LV
Sbjct: 413 RALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALV 472

Query: 491 DMYGKCGRIDDAMSLFYQ--VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRP 547
           DMY +CGR++DA  +FYQ  +    +    ++I  +  +G+ ++A++ F     EG +  
Sbjct: 473 DMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVM 532

Query: 548 DHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           D +   S+L+ C   G    G Q + H ++   G+          V ++ +  ++  A  
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGMQMHCHALKS--GLITETGVGNATVSMYSKCWNMDDAVR 590

Query: 607 FIQNMPVRPDASIWGALLGACRIH--GNMELG 636
               M ++ D   W  L+    +H  G+  LG
Sbjct: 591 VFNTMNMQ-DIVSWNGLVAGHVLHWQGDKALG 621



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 211/458 (46%), Gaps = 42/458 (9%)

Query: 44  ESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  E  F  +  +C +    +   ++H ++V  G +  VF    L+  Y   G L     
Sbjct: 193 EPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLR 252

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            F+ +  R++ +WN++IS  V+  +  EA D F    L  GL+ D ++   +L AC   V
Sbjct: 253 LFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312

Query: 161 ---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G+++H   LK+G E  + V++SL+  Y + G AN    LF+ MP+RD  +W  MI+
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372

Query: 218 GY--------------------CQSGNAV-----------EALDILDEMRLEGVSMDPIT 246
            Y                    C S NAV            AL++  EM  EGV +   T
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCT 432

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM- 305
           + SI+  C    +      I  +++K G+  N  +   L++MY + G M  A ++F Q  
Sbjct: 433 LTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRS 492

Query: 306 MERDVVSW-NSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRN 363
           +E D  +   S+I  Y ++     A   F + Q  G I  D +   S+ S+   +     
Sbjct: 493 LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
              +H   ++ G   E   +GNA V MY+K   ++ A  VF  + ++D++SWN L+ G+ 
Sbjct: 553 GMQMHCHALKSGLITE-TGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHV 611

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +    +A+ +++ ME+   I P+  T+  I+ AY H 
Sbjct: 612 LHWQGDKALGIWKKMEKAG-IKPDSITFALIISAYKHT 648


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/763 (35%), Positives = 419/763 (54%), Gaps = 10/763 (1%)

Query: 64  KRLHALLVVSGKIKTV--FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           + +HA +V  G +  +  F +  L+NFYA LG L+ +R  FD +  RN  ++ +++  Y 
Sbjct: 65  RAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYA 124

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSV----LKLGFEWD 177
             G   EA++ F +     G   + +    +LK    + D   + C +     KLG + +
Sbjct: 125 LRGEFEEALELFRRLQ-REGHEVNHFVLTTILKVLVTM-DAPGLACGIHACACKLGHDRN 182

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            FV  +L+  Y   G    AR +FD +  +D+ +W AM+S Y ++     AL+   +MR+
Sbjct: 183 AFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRM 242

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            G   +P  + S L       + L G  IH   VK   +    V   L++MYAK G +  
Sbjct: 243 TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A  +F+ +   DV+ W+ +I+ Y QS     A   F  M ++ + P+  +L  +    A 
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           +        +H   ++ G+  E + +GNA++DMYAK   + ++  +F  L   + +SWNT
Sbjct: 363 IAFLELGEQIHNLAIKLGYESE-LFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNT 421

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I GY Q+G A +A+ VF  M   + ++  Q T+ S+L A ++  +++  ++IH+ + K+
Sbjct: 422 IIVGYCQSGFAEDALSVFHEMRAAHMLS-TQVTFSSVLRACANTSSIKHAVQIHSLIEKS 480

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               D  V   L+D Y KCG I DA+ +F  +     V WN+IIS + +HG+   AL  F
Sbjct: 481 TFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELF 540

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            +M    ++ + +TFVSLL+ C  +GLV++G   F+ M  +  IKP ++HY C+V L GR
Sbjct: 541 DRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGR 600

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           AG L  A  FI ++P  P   +W ALL +C +H N+ LG  A++++ +++  +   YVL+
Sbjct: 601 AGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLL 660

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN+YA  G  + V   R   R+ G+KK  G S +E+  +V  F  G+  HP    I   L
Sbjct: 661 SNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAML 720

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L  K    GYVPD + VL DV+E+EK  +L  HSERLA+A+G+  +PP  PI+I KNL
Sbjct: 721 EWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNL 780

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           R C DCH   K IS+I +REIIVRD NRFHHF++GICSCGDYW
Sbjct: 781 RSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 10/269 (3%)

Query: 360 DCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           D R  R+VH  +++RG   + D    N +++ YAKLG + +A  +F+G+P ++ +S+ TL
Sbjct: 60  DARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTL 119

Query: 419 ITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           + GYA  G   EA+E+F+ ++ E +E+  N     +IL     + A      IHA   K 
Sbjct: 120 MQGYALRGEFEEALELFRRLQREGHEV--NHFVLTTILKVLVTMDAPGLACGIHACACKL 177

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               + FV T L+D Y  CG +  A  +F  +    +V W A++SC+  +   + ALN F
Sbjct: 178 GHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTF 237

Query: 538 RQMLDEGVRPDHITFVSLLTA--CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            +M   G +P+     S L A  C  S L+ +G  +   ++  +  +PH+   G ++D++
Sbjct: 238 SKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGI-HGCSVKTLYDTEPHVG--GALLDMY 294

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            + G +  AH   + +P   D  +W  L+
Sbjct: 295 AKCGDIEDAHAIFEMIP-HDDVILWSFLI 322



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)

Query: 45  SREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101
           S ++ F  + ++C   + + H  ++H+L+  S           L++ YA  G +  +   
Sbjct: 449 STQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKV 508

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNL 159
           F+ I   +V +WNS+IS Y   GR + A++ F +    S ++ +  TF  +L  C    L
Sbjct: 509 FESIVECDVVSWNSIISAYALHGRATNALELFDRMN-KSDIKANDVTFVSLLSVCGSTGL 567

Query: 160 VD-GKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGS- 211
           V+ G  +  S++      D  +  S+ H  C      R G    A K   D+P   S   
Sbjct: 568 VNQGLWLFNSMMM-----DHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMV 622

Query: 212 WNAMIS 217
           W A++S
Sbjct: 623 WRALLS 628


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/754 (35%), Positives = 422/754 (55%), Gaps = 33/754 (4%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           +  L+  Y+  G ++ +R+ FD +   R++ +W +M S   R G    ++    +  L S
Sbjct: 87  ANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEM-LES 145

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVL--------KLGFEW--DVFVAASLLHMYCR 190
           GL P+ YT      AC       +++C V         K+G  W  DV V ++L+ M  R
Sbjct: 146 GLLPNAYTLCAAAHACFP----HELYCLVGGVVLGLVHKMGL-WGTDVAVGSALIDMLAR 200

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            G    ARK+FD +  +    W  +IS Y Q   A EA+++  +   +G   D  T++S+
Sbjct: 201 NGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSM 260

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM---MRHALRVFDQMME 307
           +  C    ++  GL +H   ++ GL  +  VS  L++MYAK  +   M +A +VF++M +
Sbjct: 261 ISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPK 320

Query: 308 RDVVSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            DV+SW ++I+ Y QS          F  M    I+P+ +T  S+    A ++D  + R 
Sbjct: 321 NDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQ 380

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH  +++         +GNA+V MYA+ G +  A  VF  L  + +I   T    +  + 
Sbjct: 381 VHAHVIKSNQASAHT-VGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDH 439

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
                  + +M     ++  +  T+ S++ A + VG L +G ++HA  +K     D FV+
Sbjct: 440 ------RIVRM-----DVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVS 488

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
             LV MY +CG ++DA   F ++   + + W ++IS    HG  ++AL+ F  M+  GV+
Sbjct: 489 NSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVK 548

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +T++++L+ACSH GLV EG+ YF  MQ + G+ P ++HY CMVDL  R+G +  A  
Sbjct: 549 PNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALE 608

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
           FI  MP++ DA +W  LLGACR H N+E+G + +  + E++  +   YVL+SN+YA+ G 
Sbjct: 609 FINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGL 668

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V  +RS  RD  L K  G S +EV N    F  G+ +HP+ + IY +L  L  ++K 
Sbjct: 669 WDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKG 728

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
           +GYVPD S VL D+ ++ KE  L  HSE++A+AFG+I++    PI+IFKNLRVC DCH+ 
Sbjct: 729 MGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHSA 788

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            K++S+ T REII+RDSNRFH  KDG CSCG+YW
Sbjct: 789 IKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 250/533 (46%), Gaps = 28/533 (5%)

Query: 162 GKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGY 219
           G+ +H  +L+    + D  VA SLL +Y R G    AR +FD M  +RD  SW AM S  
Sbjct: 67  GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-- 277
            ++G    +L ++ EM   G+  +  T+ +    C   + +   +   +  + H +    
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHE-LYCLVGGVVLGLVHKMGLWG 185

Query: 278 -NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++ V + LI+M A+ G +  A +VFD ++E+ VV W  +I+ Y Q      A   F   
Sbjct: 186 TDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDF 245

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            + G +PD  T+ S+ S   +L   R    +H   +R G    D  +   +VDMYAK  I
Sbjct: 246 LEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMG-LASDACVSCGLVDMYAKSNI 304

Query: 397 ---INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF--QMMEECNEINPNQGTY 451
              ++ A  VFE +P  DVISW  LI+GY Q+G+    +     +M+ E   I PN  TY
Sbjct: 305 GQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNE--SIKPNHITY 362

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            SIL + + +     G ++HA VIK+       V   LV MY + G +++A  +F Q+  
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
            S +P      C  I    D  L+     +D G+     TF SL++A +  G++++GQ+ 
Sbjct: 423 RSMIP------C--ITEGRDFPLDHRIVRMDVGISSS--TFASLISAAASVGMLTKGQQ- 471

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H M  + G          +V ++ R G+L  A      +  R   S W +++     HG
Sbjct: 472 LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS-WTSMISGLAKHG 530

Query: 632 NMELG-AVASDRLFEVDSENVGYYVLMSNIYANVG-KWEGVDEVRSLARDRGL 682
             E   ++  D +      N   Y+ + +  ++VG   EG +  RS+ RD GL
Sbjct: 531 YAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL 583



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 44/310 (14%)

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           + G   H   +   +++RD V  NS++  Y +     +A   F  M+  G++ D+++  +
Sbjct: 65  RLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMR--GLR-DIVSWTA 121

Query: 351 LTSIVAQLNDCRNSRSVHGFIM------------------------------------RR 374
           + S +A+    R S  + G ++                                    + 
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G +  DV +G+A++DM A+ G + SA  VF+GL  K V+ W  LI+ Y Q   A EA+E+
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEL 241

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F    E +   P++ T  S++ A + +G++R G+++H+  ++  L  D  V+  LVDMY 
Sbjct: 242 FLDFLE-DGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYA 300

Query: 495 KCG---RIDDAMSLFYQVPRSSSVPWNAIISCHGIHG-QGDKALNFFRQMLDEGVRPDHI 550
           K      +D A  +F ++P++  + W A+IS +   G Q +K +  F +ML+E ++P+HI
Sbjct: 301 KSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHI 360

Query: 551 TFVSLLTACS 560
           T+ S+L +C+
Sbjct: 361 TYSSILKSCA 370



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 7/186 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++LHA+ + +G     F S  LV+ Y+  G L  +  +F+ +  RNV +W SMIS   + 
Sbjct: 470 QQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKH 529

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLK-LGFEWDVF 179
           G    A+  F+   LT G++P+  T+  VL AC +   + +GK+   S+ +  G    + 
Sbjct: 530 GYAERALSLFHDMILT-GVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRME 588

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
             A ++ +  R G+   A +  ++MP++ D+  W  ++ G C+S + +E  +I  +  +E
Sbjct: 589 HYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLL-GACRSHDNIEVGEITAKNVVE 647

Query: 239 GVSMDP 244
               DP
Sbjct: 648 LEPRDP 653


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 373/605 (61%), Gaps = 10/605 (1%)

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           + +C   +   A+  +D M   GV  D IT + ++  C+    +  G  +H +I   G E
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS-NDPITAHGFFTT 335
             +FV N L+NMY KF ++  A  +FD+M ER+VVSW ++I+AY    ND   A      
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLND--KALKCLIL 145

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M + G++P++ T    +S++   +   N R +H  I++ G    DV + +A++D+Y+K  
Sbjct: 146 MFREGVRPNMFTY---SSVLRACDGLPNLRQLHCGIIKTG-LESDVFVRSALIDVYSKWS 201

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            +++A  VF+ +P +D++ WN++I G+AQN   +EA+ +F+ M+    +  +Q T  S+L
Sbjct: 202 DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFL-ADQATLTSVL 260

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A + +  L  G ++H  V+K     D+ +   L+DMY KCG ++DA S F ++     +
Sbjct: 261 RACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVI 318

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W+ +++    +G   +AL  F  M + G RP++IT + +L ACSH+GLV +G  YF  M
Sbjct: 319 SWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSM 378

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           ++ FG+ P  +HYGC++DL GRAG L  A   I  M   PD+  W  LLGACR+H N++L
Sbjct: 379 KKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDL 438

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
              A+ ++ E++ E+ G Y+L+SNIYAN  +WE V EVR    +RG++KTPG S IEV+ 
Sbjct: 439 AIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDK 498

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           ++ +F  G+ +HPK E+I   L +L  ++  +GYVPD +FVLQD+E ++KE  L  HSE+
Sbjct: 499 QIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEK 558

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAI FG+++   +  ++I KNLR+CGDCH + K +S++  R I++RD  R+HHF+DG+CS
Sbjct: 559 LAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCS 618

Query: 816 CGDYW 820
           CGDYW
Sbjct: 619 CGDYW 623



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 202/388 (52%), Gaps = 32/388 (8%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I + +L + C+    +   KR+H  +   G    +F    L+N Y     L  +   FD 
Sbjct: 56  ITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDE 115

Query: 105 ISYRNVYTWNSMISVYVRCGRLSE-AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
           +  RNV +W +MIS Y    +L++ A+ C        G+RP+ +T+  VL+AC  L + +
Sbjct: 116 MPERNVVSWTTMISAY--SNKLNDKALKCLI-LMFREGVRPNMFTYSSVLRACDGLPNLR 172

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++HC ++K G E DVFV ++L+ +Y ++   + A  +FD+MP RD   WN++I G+ Q+ 
Sbjct: 173 QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNS 232

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  EAL++   M+  G   D  T+ S+L  C     +  G  +H++++K   + +L ++N
Sbjct: 233 DGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNN 290

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MY K G +  A   F +M+E+DV+SW++++A   Q+     A   F +M+++G +P
Sbjct: 291 ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRP 350

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM---EDVIIG--------NAVVDMYA 392
           + +T++ +      L  C      H  ++ +GW+       + G          ++D+  
Sbjct: 351 NYITVLGV------LFACS-----HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLG 399

Query: 393 KLGIINSACAVFEGLPVK-DVISWNTLI 419
           + G ++ A  +   +  + D ++W TL+
Sbjct: 400 RAGRLDEAVKLIHEMECEPDSVTWRTLL 427


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/740 (35%), Positives = 401/740 (54%), Gaps = 42/740 (5%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++ YANLG+L  +R  F+    +N  TW+S++S Y + G   E +  F Q   + G +P
Sbjct: 74  MISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQKP 132

Query: 145 DFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
             YT   VL+AC  L     GK IHC  +K+  E ++FVA  L+ MY +      A  LF
Sbjct: 133 SQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF 192

Query: 202 DDMPVRDSG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
             +P R +   W AM++GY Q+G +++A+    EMR +G+  +  T  SIL  C      
Sbjct: 193 FSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAY 252

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H  I+  G   N++V + L++MYAK G +  A  + D M   DVV WNS+I   
Sbjct: 253 AFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGC 312

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
                   A   F  M    I+ D  T  S+   +A   + +   SVH   ++ G F   
Sbjct: 313 VTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTG-FDAC 371

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
             + NA+VDMYAK G ++ A  VF  +  KDVISW +L+TGY  NG   +A+++F  M  
Sbjct: 372 KTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRT 431

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              ++ +Q     +  A + +  +  G ++HA  IK+     +     L+ MY KCG ++
Sbjct: 432 A-RVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA+ +F  +   + + W AII                                      +
Sbjct: 491 DAIRVFDSMETRNVISWTAII-----------------------------------VGYA 515

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
            +GLV  GQ YF  M++ +GIKP   HY CM+DL GRAG +  A + +  M V PDA+IW
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIW 575

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
            +LL ACR+HGN+ELG  A   L +++  N   YVL+SN+++  G+WE    +R   +  
Sbjct: 576 KSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTM 635

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+ K PG+S IE+ ++V  F + +R+HP   +IY ++  +   +K  G+VPD +F L+D+
Sbjct: 636 GINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDM 695

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           +E+ KE  L  HSE+LA+AFG+++    +PI+IFKNLRVCGDCH+  K+IS I +R II+
Sbjct: 696 DEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIIL 755

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD N FHHF +G CSCGD+W
Sbjct: 756 RDLNCFHHFIEGKCSCGDFW 775



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 225/485 (46%), Gaps = 36/485 (7%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI--------------------------- 216
           LL    + G  + ARKLFD MP RD  +WN MI                           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITW 102

Query: 217 ----SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
               SGYC++G  VE L    +M  +G      T+ S+L  C+    + +G +IH Y +K
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHG 331
             LE N+FV+  L++MY+K   +  A  +F  + +R + V W +++  Y Q+ + + A  
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  M+  G++ +  T  S+ +    ++     R VHG I+  G F  +V + +A+VDMY
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSG-FGPNVYVQSALVDMY 281

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G + SA  + + + + DV+ WN++I G   +G   EA+ +F  M    +I  +  TY
Sbjct: 282 AKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHN-RDIRIDDFTY 340

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+L + +    L+ G  +H+  IK        V+  LVDMY K G +  A+ +F ++  
Sbjct: 341 PSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILD 400

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              + W ++++ +  +G  +KAL  F  M    V  D      + +AC+   ++  G R 
Sbjct: 401 KDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFG-RQ 459

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    +      L     ++ ++ + G L  A     +M  R   S W A++     +G
Sbjct: 460 VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVIS-WTAIIVGYAQNG 518

Query: 632 NMELG 636
            +E G
Sbjct: 519 LVETG 523



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 8/307 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           ES    F  +  +CT +      +++H  ++ SG    V+  + LV+ YA  GDL+ +R 
Sbjct: 233 ESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARM 292

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACR 157
             D +   +V  WNSMI   V  G + EA+  F++      +R D +T+P VLK   +C+
Sbjct: 293 ILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMH-NRDIRIDDFTYPSVLKSLASCK 351

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           NL  G+ +H   +K GF+    V+ +L+ MY + G  + A  +F+ +  +D  SW ++++
Sbjct: 352 NLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVT 411

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY  +G   +AL +  +MR   V +D   VA +   CA    I  G  +H   +K     
Sbjct: 412 GYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGS 471

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            L   N+LI MYAK G +  A+RVFD M  R+V+SW +II  Y Q+    T   +F +M+
Sbjct: 472 LLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESME 531

Query: 338 QA-GIQP 343
           +  GI+P
Sbjct: 532 KVYGIKP 538



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 172/375 (45%), Gaps = 36/375 (9%)

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF--------- 332
           SN L++  +K G +  A ++FDQM  RD  +WN +I+AY    + + A            
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99

Query: 333 ----------------------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
                                 F+ M   G +P   TL S+    + L+     + +H +
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLAS 429
            ++      ++ +   +VDMY+K   +  A  +F  LP  K+ + W  ++TGYAQNG + 
Sbjct: 160 AIKIQ-LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESL 218

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           +AI+ F+ M     +  N  T+ SIL A + + A   G ++H  +I +    +V+V + L
Sbjct: 219 KAIQCFKEMRN-QGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSAL 277

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KCG +  A  +   +     V WN++I     HG  ++AL  F +M +  +R D 
Sbjct: 278 VDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDD 337

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
            T+ S+L + +    +  G+   H +  + G          +VD++ + G+L  A + + 
Sbjct: 338 FTYPSVLKSLASCKNLKIGES-VHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALD-VF 395

Query: 610 NMPVRPDASIWGALL 624
           N  +  D   W +L+
Sbjct: 396 NKILDKDVISWTSLV 410


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/727 (34%), Positives = 399/727 (54%), Gaps = 72/727 (9%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           + H  +LK G + D +++A L+  Y  +   N A  +   +P     S++++I    ++ 
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +++ +   M   G+  D   + ++  VCA       G  IH      GL+ + FV  
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVV-------------------------------- 311
           ++ +MY + G M  A +VFD+M ++DVV                                
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 312 ---SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
              SWN I++ + +S     A   F  +   G  PD +T+ S+   V         R +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLG-------------------------------II 397
           G+++++G   +  +I +A++DMY K G                               ++
Sbjct: 276 GYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334

Query: 398 NSACAVFEGLPVK----DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
           + A  +FE    +    +V+SW ++I G AQNG   EA+E+F+ M+    + PN  T  S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNHVTIPS 393

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +LPA  ++ AL  G   H   ++  L  +V V + L+DMY KCGRI+ +  +F  +P  +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V WN++++   +HG+  + ++ F  ++   ++PD I+F SLL+AC   GL  EG +YF 
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
           MM EE+GIKP L+HY CMV+L GRAG L  A++ I+ MP  PD+ +WGALL +CR+  N+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           +L  +A+++LF ++ EN G YVL+SNIYA  G W  VD +R+     GLKK PG S I+V
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            N+V     G+++HP+ ++I +++  ++ +M+  G+ P+  F L DVEE E+E +L  HS
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHS 693

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LA+ FG++++P  +P+Q+ KNLR+CGDCH   KFIS    REI +RD+NRFHHFKDGI
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753

Query: 814 CSCGDYW 820
           CSCGD+W
Sbjct: 754 CSCGDFW 760


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/721 (36%), Positives = 393/721 (54%), Gaps = 78/721 (10%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDE 234
           D+    +L+  Y   G   ++RK+F D P+  RDS  +NAMI+ Y  + +   A+++  +
Sbjct: 78  DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137

Query: 235 MRLEGVSMDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK-- 291
           M+ +    D  T  S+L   A  ++       +H  +VK G  F   V N LI+ Y K  
Sbjct: 138 MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCA 197

Query: 292 -------FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF------------ 332
                    +M  A ++FD+M  RD +SW +II  Y ++ND   A  F            
Sbjct: 198 ASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAW 257

Query: 333 -------------------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
                              F  M  + IQ D  T  S+ S+ A     R  + +H + ++
Sbjct: 258 NAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLK 317

Query: 374 R-GWFMEDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY-------- 422
                  DV   + NA++  Y K G ++ A  +F  +P +D++SWN +++GY        
Sbjct: 318 TVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDE 377

Query: 423 -----------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
                                  AQ G A EA++ F  M+      P    +   + + S
Sbjct: 378 AKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMK-LQGFEPCDYAFAGAIISCS 436

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +G+L+ G ++HA+V++      +     L+ MY +CG +D A  LF  +P   ++ WNA
Sbjct: 437 VLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNA 496

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+  G HGQG +A+  F +ML EG+ PD I+F+++++ACSH+GLV EG++YF  M   +
Sbjct: 497 MIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVY 556

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           G+ P  +HY  ++DL  RAG    A   +++MP  P A IW ALL  CRIHGN++LG  A
Sbjct: 557 GVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEA 616

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           ++RLFE+  ++ G YVL+SN+YA  G+W  + +VR L RDRG+KK PG S IEV NKV  
Sbjct: 617 AERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHS 676

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+  HP+  +IY+ L  L  +M+ +GYVPD   VL DVE D KEH L++HSE+LA+A
Sbjct: 677 FLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVA 736

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           +G +  P  + +++FKNLR+CGDCHN  KF+S++  REI+VRD  RFHHF+DG CSCGDY
Sbjct: 737 YGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDY 796

Query: 820 W 820
           W
Sbjct: 797 W 797



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 159/624 (25%), Positives = 278/624 (44%), Gaps = 99/624 (15%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRN 109
           D++   +KL++ + L   +        + + T L+  Y+  GDL  SR  F    +  R+
Sbjct: 56  DIYSKSSKLNYARYLFDEI----PQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRD 111

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----I 165
              +N+MI+ Y        A++ F         RPD YTF  VL A   + + +K    +
Sbjct: 112 SVFYNAMITAYSHNHDGHAAIELFCDMQ-RDNFRPDNYTFTSVLGALALVAEKEKHCQQL 170

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCR---------FGLANVARKLFDDMPVRDSGS----- 211
           HC+V+K G  +   V  +L+  Y +           L   ARKLFD+MP RD  S     
Sbjct: 171 HCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTII 230

Query: 212 --------------------------WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
                                     WNAMISGY   G  +EA ++  +M +  + +D  
Sbjct: 231 TGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEF 290

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKH----GLEFNLFVSNNLINMYAKFGMMRHALRV 301
           T  S++ VCA +     G  +H Y +K       +  + V+N LI  Y K G +  A  +
Sbjct: 291 TFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEI 350

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI------- 354
           F++M ERD+VSWN I++ Y        A  FF  M +  I   ++ +  L  I       
Sbjct: 351 FNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEAL 410

Query: 355 ------------------------VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
                                    + L   ++ R +H  ++R G +   +  GNA++ M
Sbjct: 411 KFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYG-YESSLSAGNALITM 469

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           YA+ G++++A  +F  +P  D ISWN +I    Q+G  ++AIE+F+ M +   I P++ +
Sbjct: 470 YARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLK-EGILPDRIS 528

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCF--DVFVATCLVDMYGKCGRIDDAMSLFYQ 508
           +++++ A SH G +++G K +   + N      D      ++D+  + G+  +A  +   
Sbjct: 529 FLTVISACSHAGLVKEGRK-YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMES 587

Query: 509 VPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVS 566
           +P     P W A+++   IHG  D  +    ++ +  ++P H  T+V L    + +G  +
Sbjct: 588 MPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFE--LKPQHDGTYVLLSNMYAVAGQWN 645

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGC 590
           +  +   +M++  G+K   K  GC
Sbjct: 646 DMAKVRKLMRDR-GVK---KEPGC 665



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 206/497 (41%), Gaps = 117/497 (23%)

Query: 248 ASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            S+L +C     I   L   +H +++  G +    + N LI++Y+K   + +A  +FD++
Sbjct: 15  GSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEI 74

Query: 306 MERDVVSWNSIIAAYEQSND-----------------------PITAHG----------F 332
            + D+V+  ++IAAY  + D                        ITA+            
Sbjct: 75  PQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIEL 134

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDC-RNSRSVHGFIMRRG-WFMEDVIIGNAVVDM 390
           F  MQ+   +PD  T  S+   +A + +  ++ + +H  +++ G  F+  V+  NA++  
Sbjct: 135 FCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVL--NALISS 192

Query: 391 YAK---------LGIINSACAVFEGLPVKDVISWNTLITGYAQN---------------- 425
           Y K           ++  A  +F+ +P +D +SW T+ITGY +N                
Sbjct: 193 YVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKK 252

Query: 426 ---------------GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
                          GL  EA E+F+ M   ++I  ++ T+ S++   ++ G  R G ++
Sbjct: 253 LGVAWNAMISGYAHRGLYLEAFEMFRKM-IMSKIQLDEFTFTSVISVCANAGCFRLGKEM 311

Query: 471 HARVIKNCL--CFDVF--VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH-- 524
           HA  +K       DV   V   L+  Y KCG++D A  +F ++P    V WN I+S +  
Sbjct: 312 HAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVN 371

Query: 525 ---------------------------GIH--GQGDKALNFFRQMLDEGVRPDHITFVSL 555
                                      G+   G  ++AL FF +M  +G  P    F   
Sbjct: 372 VRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           + +CS  G +  G R  H     +G +  L     ++ ++ R G +  AH    NMP   
Sbjct: 432 IISCSVLGSLKHG-RQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC-V 489

Query: 616 DASIWGALLGACRIHGN 632
           DA  W A++ A   HG 
Sbjct: 490 DAISWNAMIAALGQHGQ 506


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/578 (40%), Positives = 360/578 (62%), Gaps = 3/578 (0%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T    L  CAR  ++  G  +       G + ++FV ++L+++YA++G M  A++VF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
            +M  RD V+W++++A +  +  P+ A   +  M++ G++ D + ++ +        + R
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
              SVHG ++R G  M DV+   ++VDMYAK G+++ AC VF  +  ++ +SW+ +I+G+
Sbjct: 227 MGASVHGHLLRHGMRM-DVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGF 285

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           AQNG + EA+ +F+ M+  + I P+ G  VS L A S++G L+ G  +H  +++    F+
Sbjct: 286 AQNGQSDEALRLFRNMQ-ASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFN 343

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             + T  +DMY KCG +  A  LF  +     + WNA+I+C G HG+G  AL  F++M +
Sbjct: 344 CILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G+RPDH TF SLL+A SHSGLV EG+ +F  M   F I P  KHY C+VDL  R+G + 
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A + + +M   P  +IW ALL  C  +  +ELG   +D + E+  ++VG   L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
              KW+ V +VR L +D G KK PG SSIE+     +F   +++HP+ E+I  ++  L  
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           +M+ +GY+P   FV  D+EE+ KE  L+ HSERLAIAFG++++ P + + I KNLRVCGD
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  K+IS+I +REI+VRD+ RFHHFKDG+CSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/469 (32%), Positives = 248/469 (52%), Gaps = 18/469 (3%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV-YV 121
           + RLHALL+VS        S+ L   YA  GDL+ +  T    +  +     + I   + 
Sbjct: 27  LARLHALLIVSSSASHTLISS-LAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHS 85

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
           R G  + A+  F    L    RPD  TF   L AC  L D   G+ +       G++ DV
Sbjct: 86  RRGSPASALRVFR--ALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDV 143

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV +SLLH+Y R+G    A K+F  MP RD  +W+ M++G+  +G  ++A+ +   MR +
Sbjct: 144 FVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRED 203

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           GV  D + +  ++  C  + N+  G  +H ++++HG+  ++  + +L++MYAK G++  A
Sbjct: 204 GVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVA 263

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF  M+ R+ VSW+++I+ + Q+     A   F  MQ +GIQPD   LVS     + +
Sbjct: 264 CRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNI 323

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
              +  RSVHGFI+RR  F  + I+G A +DMY+K G + SA  +F  +  +D+I WN +
Sbjct: 324 GFLKLGRSVHGFIVRR--FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAM 381

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I     +G   +A+ +FQ M E   + P+  T+ S+L A SH G + +G     R++ + 
Sbjct: 382 IACCGAHGRGQDALTLFQEMNETG-MRPDHATFASLLSALSHSGLVEEGKLWFGRMVNH- 439

Query: 479 LCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
             F +  A     CLVD+  + G +++A  L   +    +V  W A++S
Sbjct: 440 --FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLS 486


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 270/760 (35%), Positives = 392/760 (51%), Gaps = 126/760 (16%)

Query: 46  REIDFDDLFQSCTKLHHVKRLHALLVVSG-----KIKTVFSSTKLVNFYANLGDLSFSRH 100
           R I   D +   T LH +    +L    G      ++   +   +++ +AN G +S +RH
Sbjct: 93  RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARH 152

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD    ++  +WN M++ YVR GR+ EA   F   T                       
Sbjct: 153 YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT----------------------- 189

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                         EWDV    +L+  Y ++G  + AR+LFD MP RD  SWN M+SGY 
Sbjct: 190 --------------EWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYA 235

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           + G+ VEA  + D          P+                                ++F
Sbjct: 236 RRGDMVEARRLFDAA--------PVR-------------------------------DVF 256

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
               +++ YA+ GM+  A RVFD M ER+ VSWN+++AAY Q      A   F  M    
Sbjct: 257 TWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMP--- 313

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
                               CRN  S         W        N ++  YA+ G++  A
Sbjct: 314 --------------------CRNVAS---------W--------NTMLTGYAQAGMLEEA 336

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
            AVF+ +P KD +SW  ++  Y+Q G + E +++F  M  C E   N+  +  +L   + 
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCAD 395

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + AL  G+++H R+I+       FV   L+ MY KCG ++DA + F ++     V WN +
Sbjct: 396 IAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  HG G +AL  F  M     +PD IT V +L ACSHSGLV +G  YF+ M  +FG
Sbjct: 456 IAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFG 515

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           +    +HY CM+DL GRAG L  AH+ +++MP  PD+++WGALLGA RIH N ELG  A+
Sbjct: 516 VTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAA 575

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +++FE++ EN G YVL+SNIYA+ GKW    ++R +  +RG+KK PG+S IEV NKV  F
Sbjct: 576 EKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTF 635

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+  HP+ EKIY  L +L  +MK  GYV     VL DVEE+EKEH+L  HSE+LA+A+
Sbjct: 636 SAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAY 695

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHN----WTKFISQITER 796
           GI++ PP  PI++ KNLRVCGDCHN    W + + +++ R
Sbjct: 696 GILNIPPGRPIRVIKNLRVCGDCHNAFKAWIELMLKVSGR 735



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 50/352 (14%)

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           LE  +  SN  I  + + G +  A R+F  M  R   ++N+++A Y  +     A   F 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 335 TMQQAGIQPD---LLTLVSLTSIVAQLNDCR------------------NSRSVHGFI-M 372
            +     +PD     TL+   ++ + L D R                  +S + HG + +
Sbjct: 94  AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149

Query: 373 RRGWF----MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            R +F     +D +  N ++  Y + G +  A  +F      DVISWN L++GY Q G  
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVAT 487
           SEA E+F  M   + ++ N    VS        G  R+G  + AR + +     DVF  T
Sbjct: 210 SEARELFDRMPGRDVVSWN--IMVS--------GYARRGDMVEARRLFDAAPVRDVFTWT 259

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            +V  Y + G +++A  +F  +P  ++V WNA+++ +      D+A   F  M    V  
Sbjct: 260 AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV-- 317

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
              ++ ++LT  + +G++ E +  F  M ++  +      +  M+  + + G
Sbjct: 318 --ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYSQGG 362



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/261 (19%), Positives = 113/261 (43%), Gaps = 21/261 (8%)

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G    +VI  N  +  + + G +  A  +F  +P +   ++N ++ GY+ NG    A  +
Sbjct: 32  GRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMY 493
           F+ +       P+  +Y ++L A +   +L     +   + +++ + ++V +++     +
Sbjct: 92  FRAIP-----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISS-----H 141

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
              G +  A   F   P   +V WN +++ +  +G+ ++A    R + +     D I++ 
Sbjct: 142 ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEA----RGLFNSRTEWDVISWN 197

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           +L++     G +SE +  F  M         +  +  MV  + R G +  A       PV
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYARRGDMVEARRLFDAAPV 252

Query: 614 RPDASIWGALLGACRIHGNME 634
           R D   W A++     +G +E
Sbjct: 253 R-DVFTWTAVVSGYAQNGMLE 272


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/666 (38%), Positives = 380/666 (57%), Gaps = 41/666 (6%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           +Y    L + + +LF+ +    + +W ++I  Y   G   ++L     M   G+  D   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR------ 300
             S+L  CA   ++  G  +H YI++ GL+F+L+  N L+NMY+K   +  + R      
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 301 -VFDQMMER-------------------------DVVSWNSIIAAYEQSNDPITAHGFFT 334
            VFD+M ER                         D+VSWN+IIA   ++           
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M  A ++PD  TL S+  ++A+  D    + +HG  +R+G    D+ + ++++DMYAK 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQG-LDADIYVASSLIDMYAKC 287

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
             +  +C VF  L  +D ISWN++I G  QNGL  E +  F+ M    +I P   ++ SI
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMA-KIKPKSYSFSSI 346

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           +PA +H+  L  G ++H  + +N    ++F+A+ LVDMY KCG I  A  +F ++     
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W A+I    +HGQ   A+  F QM  EG++       ++LTACSH GLV E  +YF+ 
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNS 459

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M  +FGI P ++HY  + DL GRAG L  A++FI  M + P  SIW  LL ACR+H N++
Sbjct: 460 MTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNID 519

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +    ++R+ EVD  N G Y+L++NIY+   +W+   + R+  R  G++KTP  S IEV 
Sbjct: 520 MAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVK 579

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
           NKV  F  G+ +HP YEKI + +  L   M+  GYVPD S V  DVEE++K++++ SHSE
Sbjct: 580 NKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSE 639

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           RLAI FGII++P    I++ KNLRVC DCH  TKFIS+I  REI+VRD++RFHHFK+G C
Sbjct: 640 RLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTC 699

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 700 SCGDYW 705



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 248/498 (49%), Gaps = 59/498 (11%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y+++  L  S   F+ I +     W S+I  Y   G   +++  F    L SGL PD  
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGM-LASGLYPDHN 107

Query: 148 TFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYC-----------RFGL 193
            FP VLK+C  L+D   G+ +H  ++++G ++D++   +L++MY            R G 
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167

Query: 194 ANV---------------------ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
             V                      RK+F+ MP +D  SWN +I+G  ++G   E L ++
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            EM    +  D  T++S+LP+ A + +I  G  IH   ++ GL+ +++V+++LI+MYAK 
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  + RVF  + ERD +SWNSIIA   Q+        FF  M  A I+P   +  S+ 
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A L      + +HG+I R G F E++ I +++VDMYAK G I +A  +F+ + ++D+
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNG-FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDM 406

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +SW  +I G A +G A +AIE+F+ ME        +G   ++L A SH G + +  K   
Sbjct: 407 VSWTAMIMGCALHGQAPDAIELFEQME-------TEGIK-AVLTACSHGGLVDEAWKYF- 457

Query: 473 RVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPWNAIISCH 524
               N +  D  +A        + D+ G+ GR+++A        +  + S+ W  ++S  
Sbjct: 458 ----NSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSI-WATLLSAC 512

Query: 525 GIHGQGDKALNFFRQMLD 542
            +H   D A     ++L+
Sbjct: 513 RVHKNIDMAEKVANRILE 530



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 187/386 (48%), Gaps = 30/386 (7%)

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
           R  F+ +  +++ +WN++I+   R G   E +    +    + L+PD +T   VL     
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMG-GANLKPDSFTLSSVLPLIAE 251

Query: 159 LVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
            VD   GK+IH   ++ G + D++VA+SL+ MY +      + ++F  +  RD  SWN++
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           I+G  Q+G   E L    +M +  +     + +SI+P CA    +  G  +H YI ++G 
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII---AAYEQSNDPITAHGF 332
           + N+F++++L++MYAK G +R A ++FD+M  RD+VSW ++I   A + Q+ D I     
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIE---L 428

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  M+  GI+  +LT  S   +V +     NS      + R       V    AV D+  
Sbjct: 429 FEQMETEGIKA-VLTACSHGGLVDEAWKYFNS------MTRDFGIAPGVEHYAAVSDLLG 481

Query: 393 KLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECN----EINPN 447
           + G +  A     G+ +    S W TL++       A    +   M E+      E++PN
Sbjct: 482 RAGRLEEAYDFICGMHIGPTGSIWATLLS-------ACRVHKNIDMAEKVANRILEVDPN 534

Query: 448 Q-GTYVSILPAYSHVGALRQGIKIHA 472
             G Y+ +   YS     ++  K  A
Sbjct: 535 NTGAYILLANIYSAARRWKEAAKWRA 560



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 102/180 (56%), Gaps = 4/180 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   +  G    ++ ++ L++ YA    ++ S   F  ++ R+  +WNS+I+  V+ 
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G   E +  F Q  L + ++P  Y+F  ++ AC +L     GK++H  + + GF+ ++F+
Sbjct: 319 GLFDEGLRFFRQM-LMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A+SL+ MY + G    A+++FD M +RD  SW AMI G    G A +A+++ ++M  EG+
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 13/123 (10%)

Query: 44  ESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           + +   F  +  +C   T LH  K+LH  +  +G  + +F ++ LV+ YA  G++  ++ 
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            FD +  R++ +W +MI      G+  +A++ F Q   T G++        VL AC +  
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQME-TEGIK-------AVLTACSHGG 448

Query: 159 LVD 161
           LVD
Sbjct: 449 LVD 451


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/733 (34%), Positives = 402/733 (54%), Gaps = 13/733 (1%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S+  +++ Y  +GDLS +RH FD +  R V TW  ++  Y       EA   F Q 
Sbjct: 73  KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVF--VAASLLHMYCRF 191
             +  L PD+ TF  +L  C + V      ++H   +KLGF+ ++F  V   LL  YC  
Sbjct: 133 CRSCTL-PDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEV 191

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
              ++A  LF+++  +DS ++N +I+GY + G   EA+ +  +MR  G      T + +L
Sbjct: 192 RRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVL 251

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
                  +   G  +H   V  G   +  V N +++ Y+K   +     +F++M E D V
Sbjct: 252 KAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFV 311

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH--G 369
           S+N +I++Y Q+     +   F  MQ  G         ++ SI A L+  +  R VH   
Sbjct: 312 SYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQA 371

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            +      +    +GN++VDMYAK  + + A  +F+ L  +  +SW  LI+GY Q GL  
Sbjct: 372 IVATADSILH---VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHG 428

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
             +++F  M   N +  +Q T+ ++L A +   +L  G ++HA +I++    +VF  + L
Sbjct: 429 AGLKLFTKMRGAN-LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGL 487

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KCG I DA+ +F ++P  ++V WNA+IS +  +G G+ A+  F +M+  G++PD 
Sbjct: 488 VDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDS 547

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           ++ + +L ACSH G V +G  +F  M   +GI P  KHY CM+DL GR G    A   + 
Sbjct: 548 VSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 607

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWE 668
            MP  PD  +W ++L ACRI+ N  L   A+++LF ++   +   YV MSNIYA  GKWE
Sbjct: 608 EMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWE 667

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V  V+   R+RG+KK P +S +EVN+K+ +F + ++THP  ++I  ++  LT +++  G
Sbjct: 668 NVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREG 727

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           Y PD S V+QD++E  K   L  HSERLA+AF +IS+P   PI + KNLR C DCH   K
Sbjct: 728 YKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIK 787

Query: 789 FISQITEREIIVR 801
            IS+I +R I  +
Sbjct: 788 LISKIVKRVITTQ 800



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 241/521 (46%), Gaps = 47/521 (9%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           +++   ++K GF  D   +   +    R G  + A K++D+MP +++ S N MISGY + 
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 223 GNAVEALDILDEMRLEGVSM-------------------------------DPITVASIL 251
           G+   A  + D M    V                                 D +T  ++L
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 252 PVC--ARSDNILSGLLIHLYIVKHGLEFNLF--VSNNLINMYAKFGMMRHALRVFDQMME 307
           P C  A   N +    +H + VK G + NLF  V N L+  Y +   +  A  +F+++++
Sbjct: 149 PGCNDAVPQNAVGQ--VHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           +D V++N++I  YE+      A   F  M+Q+G +P   T   +   V  L+D    + +
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQL 266

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HG  +  G F  D  +GN ++  Y+K   +     +F  +P  D +S+N +I+ Y+Q   
Sbjct: 267 HGLSVTTG-FSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQ 325

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
             E++ +F+ M +C   +     + ++L   +++ +L+ G ++H + I       + V  
Sbjct: 326 YEESLNLFREM-QCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGN 384

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH---GIHGQGDKALNFFRQMLDEG 544
            LVDMY KC   D+A  +F  + + S+V W A+IS +   G+HG G   L  F +M    
Sbjct: 385 SLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAG---LKLFTKMRGAN 441

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           +R D  TF ++L A +    +  G++    +     ++      G +VD++ + G +  A
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDA 500

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
               + MP R +A  W AL+ A   +G+ E    A  ++ +
Sbjct: 501 VQVFEEMPDR-NAVSWNALISAYADNGDGEAAIGAFTKMIQ 540



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 212/436 (48%), Gaps = 35/436 (8%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  + ++   LH     ++LH L V +G  +      ++++FY+    +  +R+ F+
Sbjct: 244 DFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFN 303

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +   +  ++N +IS Y +  +  E+++ F +       R +F  F  +L    NL    
Sbjct: 304 EMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNF-PFATMLSIAANLSSLQ 362

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++HC  +    +  + V  SL+ MY +  + + A  +F  +  R + SW A+ISGY 
Sbjct: 363 VGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYV 422

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G     L +  +MR   +  D  T A++L   A   ++L G  +H +I++ G   N+F
Sbjct: 423 QKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVF 482

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
             + L++MYAK G ++ A++VF++M +R+ VSWN++I+AY  + D   A G FT M Q+G
Sbjct: 483 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSG 542

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV--IIG--------NAVVDM 390
           +QPD    VS+  ++   + C       GF+ +   F + +  I G          ++D+
Sbjct: 543 LQPD---SVSILGVLIACSHC-------GFVEQGTEFFQAMSPIYGITPKKKHYACMLDL 592

Query: 391 YAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP 446
             + G    A  + + +P + D I W++++     Y    LA  A E    ME+  +   
Sbjct: 593 LGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRD--- 649

Query: 447 NQGTYVSILPAYSHVG 462
               YVS+   Y+  G
Sbjct: 650 -AAAYVSMSNIYAAAG 664



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 53/305 (17%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+LHA ++ SG ++ VFS + LV+ YA  G +  +   F+ +  RN  +WN++IS Y   
Sbjct: 466 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADN 525

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G    A+  F +  + SGL+PD  +   VL AC         HC  ++ G E+  F A S
Sbjct: 526 GDGEAAIGAFTKM-IQSGLQPDSVSILGVLIACS--------HCGFVEQGTEF--FQAMS 574

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
            +     +G+    +             +  M+    ++G   EA  ++DEM  E    D
Sbjct: 575 PI-----YGITPKKKH------------YACMLDLLGRNGRFAEAEKLMDEMPFEP---D 614

Query: 244 PITVASILPVCA--RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            I  +S+L  C   ++ ++       L+ ++   +   +VS  + N+YA  G   +   V
Sbjct: 615 EIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVS--MSNIYAAAGKWENVRHV 672

Query: 302 FDQMMERDV-----VSW---NSIIAAYEQSNDPITAHG---------FFTTMQQAGIQPD 344
              M ER +      SW   N  I  +  SND    +G           T +++ G +PD
Sbjct: 673 KKAMRERGIKKVPAYSWVEVNHKIHVFS-SNDQTHPNGDEIVKKINELTTEIEREGYKPD 731

Query: 345 LLTLV 349
             ++V
Sbjct: 732 TSSVV 736



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 33/227 (14%)

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
           +R V   I++ G F  D    N  V+   + G +++A  V++ +P K+ +S NT+I+GY 
Sbjct: 28  TRRVDARIIKTG-FNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYV 86

Query: 424 QNGLASEAIEVFQMMEECNEIN------------------------------PNQGTYVS 453
           + G  S A  +F  M +   +                               P+  T+ +
Sbjct: 87  KMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTT 146

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC--LVDMYGKCGRIDDAMSLFYQVPR 511
           +LP  +         ++HA  +K     ++F+  C  L+  Y +  R+D A  LF ++  
Sbjct: 147 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
             SV +N +I+ +   G   +A++ F +M   G +P   TF  +L A
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/753 (34%), Positives = 417/753 (55%), Gaps = 84/753 (11%)

Query: 147 YTFPPVLKACRNLVDGKKIHCSVLKLGF---------EWDVFVAASLLHMYCRFGLANVA 197
           + F P       L+D   ++C   +L +         E D     +++  YC  G   +A
Sbjct: 43  FGFQPHAHILNRLID---VYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGDIALA 99

Query: 198 RKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           R +F++ PV  RD+  +NAMI+G+  + +   A+++  +M+ EG   D  T AS+L   A
Sbjct: 100 RSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLA 159

Query: 256 RS-DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG----MMRHALRVFDQMMERDV 310
              D+    +  H   +K G  +   VSN L+++Y++      ++  A +VFD + E+D 
Sbjct: 160 LVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDE 219

Query: 311 VSWNSIIAAYEQS---------------NDPITAHGFFTT-----------------MQQ 338
            SW +++  Y ++               N  + A+    +                 M  
Sbjct: 220 RSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVS 279

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +GI+ D  T  S+    A     +  + VH +++RR  F       N++V +Y K G  N
Sbjct: 280 SGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF--SFHFDNSLVTLYYKCGKFN 337

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN------------- 445
            A A+FE +P KD++SWN L++GY  +G   EA  +F+ M+E N ++             
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397

Query: 446 -----------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
                            P    +   + + + +GA   G + HA+++K      +     
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNA 457

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           L+ MY KCG +++A  +F  +P   SV WNA+I+  G HG G +A++ + +ML +G+RPD
Sbjct: 458 LITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPD 517

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            ITF+++LTACSH+GLV +G++YF+ M+  + I P   HY  ++DL  R+G    A + I
Sbjct: 518 RITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESII 577

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           +++P +P A IW ALL  CR+HGNMELG +A+D+LF +  E+ G Y+L+SN+YA  G+WE
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWE 637

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V  VR L RDRG+KK    S IE+  +V  F   + +HP+ E +Y  L++L  +M+ LG
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLG 697

Query: 729 YVPDKSFVLQDVEED-EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           YVPD SFVL DVE D  KE +LT+HSE++A+AFG++  PP + I+IFKNLR CGDCHN+ 
Sbjct: 698 YVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFF 757

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +F+S++ +R+II+RD  RFHHF++G CSCG++W
Sbjct: 758 RFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 155/612 (25%), Positives = 281/612 (45%), Gaps = 91/612 (14%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRN 109
           D++   ++L + ++L   +    KI    + T +V+ Y   GD++ +R  F+   +S R+
Sbjct: 57  DVYCKSSELDYARQLFDEISEPDKI----ARTTMVSGYCASGDIALARSVFEETPVSMRD 112

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----I 165
              +N+MI+ +        A++ F +     G +PD +T+  VL     +VD +K     
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMK-HEGFKPDDFTYASVLAGLALVVDDEKQCVQF 171

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFG----LANVARKLFDDMPVRDSGSW--------- 212
           H + LK G  +   V+ +L+ +Y R      L + ARK+FDD+P +D  SW         
Sbjct: 172 HAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVK 231

Query: 213 -----------------------NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
                                  NAMISGY   G   EAL+++  M   G+ +D  T  S
Sbjct: 232 NGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPS 291

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           ++  CA +  +  G  +H Y+++   +F+    N+L+ +Y K G    A  +F++M  +D
Sbjct: 292 VIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKD 350

Query: 310 VVSWNSIIAAYEQSN------------------------DPITAHGF-------FTTMQQ 338
           +VSWN++++ Y  S                           +  +GF       F+ M++
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G +P            A L    N +  H  +++ G F   +  GNA++ MYAK G++ 
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG-FDSSLSAGNALITMYAKCGVVE 469

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  +P  D +SWN LI    Q+G   EA++V++ M +   I P++ T++++L A 
Sbjct: 470 EAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLK-KGIRPDRITFLTVLTAC 528

Query: 459 SHVGALRQGIKIH---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
           SH G + QG K       V +     D +    L+D+  + G+  +A S+   +P + ++
Sbjct: 529 SHAGLVDQGRKYFNSMETVYRIPPGADHYAR--LIDLLCRSGKFSEAESIIESLPFKPTA 586

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFH 573
             W A++S   +HG  +  +    ++   G+ P+H  T++ L    + +G   E  R   
Sbjct: 587 EIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNMYAATGQWEEVARVRK 644

Query: 574 MMQEEFGIKPHL 585
           +M++  G+K  +
Sbjct: 645 LMRDR-GVKKEV 655



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/468 (23%), Positives = 191/468 (40%), Gaps = 106/468 (22%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME------------------ 307
           +H  I+  G + +  + N LI++Y K   + +A ++FD++ E                  
Sbjct: 36  VHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 308 ---------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-L 351
                          RD V +N++I  +  +ND  +A   F  M+  G +PD  T  S L
Sbjct: 96  IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG----IINSACAVFEGL 407
             +   ++D +     H   ++ G       + NA+V +Y++      +++SA  VF+ +
Sbjct: 156 AGLALVVDDEKQCVQFHAAALKSGAGYV-TSVSNALVSVYSRCASSPSLLHSARKVFDDI 214

Query: 408 PVKDVISWNTLITGYAQN--------------------------------GLASEAIEVF 435
           P KD  SW T++TGY +N                                GL  EA+E+ 
Sbjct: 215 PEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMV 274

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           + M     I  ++ TY S++ A ++   L+ G ++HA V++    F       LV +Y K
Sbjct: 275 RRMVSSG-IELDEFTYPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLVTLYYK 332

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCH------------------------------- 524
           CG+ ++A ++F ++P    V WNA++S +                               
Sbjct: 333 CGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGL 392

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             +G G++ L  F  M  EG  P    F   + +C+  G    GQ+ FH    + G    
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-FHAQLVKIGFDSS 451

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           L     ++ ++ + G +  A    + MP   D+  W AL+ A   HG+
Sbjct: 452 LSAGNALITMYAKCGVVEEAQQVFRTMPCL-DSVSWNALIAALGQHGH 498



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 113/236 (47%), Gaps = 12/236 (5%)

Query: 35  QISPDCLENESREIDFDD----LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA 90
           Q+    L  E     FD+    L+  C K +  + +   +      K + S   L++ Y 
Sbjct: 307 QVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKM----PAKDLVSWNALLSGYV 362

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
           + G +  ++  F  +  +N+ +W  MIS     G   E +  F       G  P  Y F 
Sbjct: 363 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK-REGFEPCDYAFS 421

Query: 151 PVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
             +K+C  L    +G++ H  ++K+GF+  +    +L+ MY + G+   A+++F  MP  
Sbjct: 422 GAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCL 481

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           DS SWNA+I+   Q G+ VEA+D+ +EM  +G+  D IT  ++L  C+ +  +  G
Sbjct: 482 DSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQG 537


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/678 (37%), Positives = 388/678 (57%), Gaps = 37/678 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           ++F   +LL       L +    LF  M  RD+ S+NA+I+G+   G    A+ +   + 
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 237 LEGVSMDPITV---ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
             G S+ P  +   A ++   A  D  L G   H  I++ G   N FV + L+ MYAK G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRAL-GRQFHCQILRLGFGVNAFVGSPLVGMYAKMG 189

Query: 294 MMRHALRVFDQM-------------------------------MERDVVSWNSIIAAYEQ 322
           ++  A RVFD+M                                +RD ++W +++  + Q
Sbjct: 190 LIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQ 249

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           +     A  FF  M+  GI  D  T  S+ +    L+     + +H +I+R   + ++V 
Sbjct: 250 NGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT-HYDDNVF 308

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G+A+VDMY+K   I  A   F  +  K++ISW  LI GY QNG + EA+ VF  M+  +
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR-D 367

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            I+P+  T  S++ + +++ +L +G + H   + + L   + V+  LV +YGKCG I+DA
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDA 427

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             LF ++     V W A+++ +   G+  + ++ F +ML + V+PD +TF+ +L+ACS +
Sbjct: 428 HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRA 487

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           G V +G  YFH MQ++ GI P   HY CM+DL+ R+G L  A  FI+ MP+ PDA  WG 
Sbjct: 488 GFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGT 547

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LL ACR+ G+ME+G  A++ L E+D +N   YVL+ +++A  G W  V ++R   RDR +
Sbjct: 548 LLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQV 607

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK PG S I+  NKV IF   +++HP  + IY++L  L +KM   GY PD S VL DV +
Sbjct: 608 KKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVAD 667

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
            +K H+++ HSE+LAIAFG++  P + PI+I KNLRVC DCHN TK IS+IT R+I+VRD
Sbjct: 668 TDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRD 727

Query: 803 SNRFHHFKDGICSCGDYW 820
           + RFH F +G+CSCGD+W
Sbjct: 728 AVRFHKFSNGVCSCGDFW 745



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 248/516 (48%), Gaps = 56/516 (10%)

Query: 66  LHALLVVSGKI------KTVFSST---KLVNFYANLGDLSFSR------HTFDHISYRNV 110
           L+ LL   GK       + VF +T    L  + A L  L+ +R        F  ++ R+ 
Sbjct: 44  LNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDT 103

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNLVD---GKKIH 166
            ++N++I+ +   G  + AV  ++      S +RP   T   ++ A   L D   G++ H
Sbjct: 104 VSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFH 163

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGL-------------ANV----------------- 196
           C +L+LGF  + FV + L+ MY + GL              NV                 
Sbjct: 164 CQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVE 223

Query: 197 -ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR+LF+ M  RD  +W  M++G+ Q+G   +AL+    MR +G+++D  T  SIL  C 
Sbjct: 224 EARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACG 283

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  IH YI++   + N+FV + L++MY+K   ++ A   F +M  ++++SW +
Sbjct: 284 ALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTA 343

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  Y Q+     A   F+ MQ+ GI PD  TL S+ S  A L         H   +  G
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 403

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
             M  + + NA+V +Y K G I  A  +F+ +   D +SW  L+TGYAQ G A E I++F
Sbjct: 404 -LMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLF 462

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN--CLCFDVFVATCLVDMY 493
           + M    ++ P+  T++ +L A S  G + +G      + K+   +  D    TC++D+Y
Sbjct: 463 EKM-LAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHY-TCMIDLY 520

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
            + GR+ +A     Q+P    ++ W  ++S   + G
Sbjct: 521 SRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 202/448 (45%), Gaps = 46/448 (10%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++ H  ++  G     F  + LV  YA +G +  ++  FD +  +NV  +N+MI+  +RC
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRC 219

Query: 124 GRLSEAV---------DCFYQFTLTSGLRP---------------------DFYTFPPVL 153
             + EA          DC    T+ +G                        D YTF  +L
Sbjct: 220 KMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSIL 279

Query: 154 KAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
            AC     L  GK+IH  +++  ++ +VFV ++L+ MY +      A   F  M  ++  
Sbjct: 280 TACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNII 339

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SW A+I GY Q+G + EA+ +  EM+ +G+  D  T+ S++  CA   ++  G   H   
Sbjct: 340 SWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLA 399

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  GL   + VSN L+ +Y K G +  A R+FD+M+  D VSW +++  Y Q        
Sbjct: 400 LVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETI 459

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M    ++PD +T + + S  ++        S    + +    +        ++D+
Sbjct: 460 DLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDL 519

Query: 391 YAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINP-N 447
           Y++ G +  A    + +P+  D I W TL++     G     +E+ Q   E   EI+P N
Sbjct: 520 YSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG----DMEIGQWAAENLLEIDPQN 575

Query: 448 QGTYVSILPAYS------HVGALRQGIK 469
             +YV +   ++       V  LR+G++
Sbjct: 576 PASYVLLCSMHATKGNWNQVAQLRRGMR 603


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/781 (34%), Positives = 430/781 (55%), Gaps = 41/781 (5%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           +F    L++ Y  LG +  +   F  +S  NV ++ ++IS + +     EAV+ F+   L
Sbjct: 130 IFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAM-L 188

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
            SG+ P+ YTF  +L AC   +D   G ++H  V+KLG    VF+  +L+ +YC+ G  +
Sbjct: 189 DSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLD 248

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVC 254
           +  +LF++MP RD  SWN +IS   +     EA D    M+L +G+ +D  +++++L  C
Sbjct: 249 LVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTAC 308

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK----------------------- 291
           A S   + G  +H   +K GLE +L VS++LI  Y K                       
Sbjct: 309 AGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWT 368

Query: 292 --------FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
                   FGM+  A+ VF++M +R+ +S+N+++A   +++D   A   F  M + G++ 
Sbjct: 369 GMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEI 428

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              TL S+ +    L   + S+ + GF+M+ G  + +  I  A+VDMY + G +  A  +
Sbjct: 429 SDCTLTSIITACGLLKSFKVSQQIQGFVMKFG-ILSNSCIETALVDMYTRCGRMEDAEKI 487

Query: 404 FEGLPVKD--VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
           F    +++       ++I GYA+NG  +EAI +F   +    I  ++    SIL     +
Sbjct: 488 FYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSI 547

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G    G ++H   +K+ L  +  V    V MY KC  +DDA+ +F  +     V WN ++
Sbjct: 548 GFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLV 607

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS--GLVSEGQRYFHMMQEEF 579
           + H +H QGDKAL  +++M   G++PD ITF  +++A  H+   LV   +  F  M+ E 
Sbjct: 608 AGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEH 667

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            IKP L+HY   + + GR G L  A   I+NMP+ PD  +W ALL +CRI+ N  L  +A
Sbjct: 668 NIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLA 727

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           +  +  V+ ++   Y+L SN+Y+  G+W   ++VR   R++G +K P  S I   NK+  
Sbjct: 728 ARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHS 787

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           FY  +R+HP+ + IY  L  L  +   +GYVPD SFVLQ+VEE +K+  L  HS +LA  
Sbjct: 788 FYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAAT 847

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FGI+ + P  PIQI KN+R+CGDCHN+ K++S +T R+I++RD++ FH F DG CSC DY
Sbjct: 848 FGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDY 907

Query: 820 W 820
           W
Sbjct: 908 W 908



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 240/511 (46%), Gaps = 41/511 (8%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            + +H   LKL  E D+F+  +L+  Y + GL   A K+F  +   +  S+ A+ISG+ +
Sbjct: 116 ARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           S    EA+++   M   G+  +  T  +IL  C R+ +   G  +H  +VK GL   +F+
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AG 340
            N L+ +Y K G +   LR+F++M ERD+ SWN++I++  +      A  +F  MQ   G
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++ D  +L +L +  A        + +H   ++ G     + + ++++  Y K G  N  
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVG-LESHLSVSSSLIGFYTKCGSANDV 352

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN------------- 447
             +FE +P++DVI+W  +IT Y + G+   A+EVF  M + N I+ N             
Sbjct: 353 TDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGS 412

Query: 448 -----------QG------TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
                      +G      T  SI+ A   + + +   +I   V+K  +  +  + T LV
Sbjct: 413 RALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALV 472

Query: 491 DMYGKCGRIDDAMSLFYQ--VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRP 547
           DMY +CGR++DA  +FYQ  +    +    ++I  +  +G+ ++A++ F     EG +  
Sbjct: 473 DMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVM 532

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           D +   S+L+ C   G    G++  H    + G+          V ++ +  ++  A   
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGKQ-MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRV 591

Query: 608 IQNMPVRPDASIWGALLGACRIH--GNMELG 636
              M ++ D   W  L+    +H  G+  LG
Sbjct: 592 FNTMNMQ-DIVSWNGLVAGHVLHWQGDKALG 621



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 212/458 (46%), Gaps = 42/458 (9%)

Query: 44  ESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  E  F  +  +C +    +   ++H ++V  G +  VF    L+  Y   G L     
Sbjct: 193 EPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLR 252

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            F+ +  R++ +WN++IS  V+  +  EA D F    L  GL+ D ++   +L AC   V
Sbjct: 253 LFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312

Query: 161 ---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G+++H   LK+G E  + V++SL+  Y + G AN    LF+ MP+RD  +W  MI+
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372

Query: 218 GY--------------------CQSGNAV-----------EALDILDEMRLEGVSMDPIT 246
            Y                    C S NAV            AL++  EM  EGV +   T
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCT 432

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM- 305
           + SI+  C    +      I  +++K G+  N  +   L++MY + G M  A ++F Q  
Sbjct: 433 LTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRS 492

Query: 306 MERDVVSW-NSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRN 363
           +E D  +   S+I  Y ++     A   F + Q  G I  D +   S+ S+   +     
Sbjct: 493 LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + +H   ++ G   E   +GNA V MY+K   ++ A  VF  + ++D++SWN L+ G+ 
Sbjct: 553 GKQMHCHALKSGLITE-TGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHV 611

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +    +A+ +++ ME+   I P+  T+  I+ AY H 
Sbjct: 612 LHWQGDKALGIWKKMEKAG-IKPDSITFALIISAYKHT 648


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/642 (39%), Positives = 377/642 (58%), Gaps = 35/642 (5%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN M  G+  + ++V AL +   M   G+  +  +   +L  CA+S  ++ G  IH +++
Sbjct: 33  WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER----------------------- 308
           K G + +++V+ +LI+MYA+ G +  A +VFD+   R                       
Sbjct: 93  KLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARK 152

Query: 309 --------DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
                   DVVSWN++I+ Y ++ +   A   +  M +  ++PD  T+V++ S  AQ   
Sbjct: 153 LFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGS 212

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H +I   G F  ++ I N ++D+Y+K G + +AC +F+GL  KDVISWNTLI 
Sbjct: 213 IELGRQLHSWIEDHG-FGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIG 271

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-- 478
           G+    L  EA+ +FQ M    E +PN  T +S+LPA +H+GA+  G  IH  + K    
Sbjct: 272 GHTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKG 330

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           +     + T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ + A + F 
Sbjct: 331 VTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFS 390

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M   G+ PD ITFV LL+ACSHSG++  G+  F  M +++ I P L+HYGCM+DL G  
Sbjct: 391 KMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHC 450

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G    A   I+ MP+ PD  IW +LL AC++H N+ELG   +  L +++ EN G YVL+S
Sbjct: 451 GLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLS 510

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           NIYA  G+W+ V ++R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY  L 
Sbjct: 511 NIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLE 570

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            +   M+  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I KNLR
Sbjct: 571 EMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLR 630

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           VC +CH  TK IS+I +REII RD  R H  KDG+ SC DYW
Sbjct: 631 VCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 9/400 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G ++ +R  FD IS ++V +WN+MIS YV      EA++  Y+ 
Sbjct: 129 RHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALE-LYKD 187

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + ++PD  T   V+ AC    ++  G+++H  +   GF  ++ +   L+ +Y + G 
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF  +  +D  SWN +I G+       EAL +  EM   G S + +T+ S+LP 
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VFD M+ R + 
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 367

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        A   F+ M++ GI PD +T V L S  +        R +   +
Sbjct: 368 SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSM 427

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            +       +     ++D+    G+   A  +   +P++ D + W +L+     +     
Sbjct: 428 SQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVEL 487

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
                Q + +    NP  G+YV +   Y+  G   Q  KI
Sbjct: 488 GESYAQNLIKIEPENP--GSYVLLSNIYATAGRWDQVAKI 525



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/401 (23%), Positives = 195/401 (48%), Gaps = 37/401 (9%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  + +A+ +F+ + E +++ WN++   +  ++D +TA   +  M   G+ P+  +   L
Sbjct: 12  FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGW------------------FMED------------V 381
               A+       + +HG +++ G+                   +ED            V
Sbjct: 72  LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A++  YA  G IN+A  +F+ + VKDV+SWN +I+GY +     EA+E+++ M + 
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N + P++ T V+++ A +  G++  G ++H+ +  +    ++ +   L+D+Y KCG ++ 
Sbjct: 192 N-VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  + +   + WN +I  H       +AL  F++ML  G  P+ +T +S+L AC+H
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 310

Query: 562 SGLVSEGQRYFHMM--QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
            G +  G R+ H+   +   G+         ++D++ + G +  A     +M  R  +S 
Sbjct: 311 LGAIDIG-RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSS- 368

Query: 620 WGALLGACRIHG--NMELGAVASDRLFEVDSENVGYYVLMS 658
           W A++    +HG  N      +  R   +D +++ +  L+S
Sbjct: 369 WNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 405/748 (54%), Gaps = 8/748 (1%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +  FS   +++ Y   G+L+ +R  FD    R V  W +MI  Y +  R  +A   F + 
Sbjct: 72  RNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEM 131

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKI---HCSVLKLGFEWDVFVAASLLHMYCRFGL 193
              SG +PD+ T+  +L  C +L   K++   H  ++KLG   +  V  +LL  Y + G 
Sbjct: 132 H-RSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGG 190

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            + AR+LF +M   DS S+N MI+GY  +G   EA+++  EM+  G      T A+++  
Sbjct: 191 LDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
               D+   G  IH ++VK     N+FV N  ++ Y+K   +    ++F++M E D VS+
Sbjct: 251 SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSY 310

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N II AY        +   F  +Q            ++ SI A   D +  R +H  ++ 
Sbjct: 311 NVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVV 370

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
                 D  + N++VDMYAK G    A  +F  L  +  + W  +I+   Q GL    ++
Sbjct: 371 -SMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLK 429

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F  M   N ++ +Q T+  +L A +++ ++  G ++H+ VI++    +V+    L+DMY
Sbjct: 430 LFYEMRRAN-VSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMY 487

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
             C  I DA+  F ++   + V WNA++S +  +G G   L  F +M+  G +PD ++F+
Sbjct: 488 ANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFL 547

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +LTACSH  LV EG +YF+ M   + + P  +HY  MVD   R+G    A   +  MP 
Sbjct: 548 CILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPF 607

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKWEGVDE 672
            PD  +W ++L +CRIH N  L   A+ +LF +    +   YV MSNI+A  G+W+ V +
Sbjct: 608 EPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVK 667

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V+   RDRG++K P +S +E+ +KV +F   +  HP+  +I  ++  L  +M+  GY PD
Sbjct: 668 VKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPD 727

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            S   Q+V+++ K   L  HSERLAIAF +I++P  SPI + KNLR C DCH   K IS+
Sbjct: 728 ISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISK 787

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  REI VRDSNRFHHF+DG CSCGDYW
Sbjct: 788 IVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 201/425 (47%), Gaps = 35/425 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H  +V +  I+ VF     ++FY+    ++  R  F+ +   +  ++N +I+ Y   
Sbjct: 261 QQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWV 320

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           G++ E++D F +   T+  R +F  FP +L    + +D   G+++H  V+    + D  V
Sbjct: 321 GKVKESIDLFQELQFTTFDRKNF-PFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRV 379

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           + SL+ MY + G    A ++F  +  R +  W AMIS   Q G     L +  EMR   V
Sbjct: 380 SNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANV 439

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D  T A +L   A   +IL G  +H  +++ G   N++    L++MYA    ++ A++
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIK 498

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
            F++M ER+VV+WN++++AY Q+ D       F  M  +G QPD    VS   I+   + 
Sbjct: 499 TFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPD---SVSFLCILTACSH 555

Query: 361 CR----------NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           CR          +   V+    +R  +        A+VD   + G  + A  +   +P +
Sbjct: 556 CRLVEEGLKYFNDMSGVYNLAPKREHY-------TAMVDALCRSGRFDEAEKLMGQMPFE 608

Query: 411 -DVISWNTLITG---YAQNGLASEAI-EVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            D I W +++     +    LA +A  ++F M     ++  +   YV++   ++  G   
Sbjct: 609 PDEIVWTSVLNSCRIHKNYALARKAAGQLFNM-----KVLRDAAPYVTMSNIFAEAGQWD 663

Query: 466 QGIKI 470
             +K+
Sbjct: 664 SVVKV 668


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/777 (34%), Positives = 428/777 (55%), Gaps = 53/777 (6%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL-GDLSFSRHTFDHIS 106
           ++   +       +H+++LHA ++ +      +    L+N    L     ++   F+   
Sbjct: 2   LELGSIASRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTL 61

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
             NV+ + SM+  Y      ++ V   Y+     G+RPD + +P ++K+      G   H
Sbjct: 62  NPNVFVFTSMLRFYSHLQDHAKVV-LMYEQMQGCGVRPDAFVYPILIKSAGT--GGIGFH 118

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGN 224
             VLKLG   D FV  +++ MY R G    ARK+FD++P   R    WNAM+SGY +  +
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             +A  + D                ++P                       E N+     
Sbjct: 179 EGQAQWLFD----------------VMP-----------------------ERNVITWTA 199

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           ++  YAK   +  A R FD M ER VVSWN++++ Y Q+     A   F  M  AGI+PD
Sbjct: 200 MVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPD 259

Query: 345 LLTLVSLTSIVAQLND-CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
             T V++ S  +   D C  +  V     +R     +  +  A++DMYAK G ++SA  +
Sbjct: 260 ETTWVTVISACSSRGDPCLAASLVRTLHQKR--IQLNCFVRTALLDMYAKFGDLDSARKL 317

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +P ++V++WN++I GYAQNG ++ AIE+F+ M    ++ P++ T VS++ A  H+GA
Sbjct: 318 FNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGA 377

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G  +   + +N +   +     ++ MY +CG ++DA  +F ++     V +N +IS 
Sbjct: 378 LELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISG 437

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG G +A+N    M + G+ PD +TF+ +LTACSH+GL+ EG++ F  +++     P
Sbjct: 438 FAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----P 492

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            + HY CMVDL GR G L  A   ++ MP+ P A ++G+LL A RIH  +ELG +A+++L
Sbjct: 493 AIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKL 552

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
           FE++ +N G ++L+SNIYA+ G+W+ V+ +R   +  G+KKT GWS +E   K+  F   
Sbjct: 553 FELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVA 612

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           +R+H + + IY  L  L  KM+  GY+ DKS VL+DVEE+EKE I+ +HSE+LAI + ++
Sbjct: 613 DRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALL 672

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S   + I++ KNLRVC DCH   K IS++  R IIVRD+NRFH F DG+CSC DYW
Sbjct: 673 VSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/693 (36%), Positives = 405/693 (58%), Gaps = 12/693 (1%)

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           Y+  L  G RPD +TFP V+K C  L    +G+  H  V+KLG E DV+   SL+  Y +
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR--LEGVSMDPITVA 248
            GL   A ++FD MPVRD  +WN M+ GY  +G    AL    EM   LE V  D + + 
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALE-VQHDSVGII 213

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           + L  C    + + G  IH Y+++HGLE ++ V  +L++MY K G + +A  VF  M  R
Sbjct: 214 AALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
            VV+WN +I  Y  +  P  A   F  M+  G+Q +++T ++L +  AQ       RSVH
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
           G+++RR  F+  V++  A+++MY K+G + S+  +F  +  K ++SWN +I  Y    + 
Sbjct: 334 GYVVRR-QFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMY 392

Query: 429 SEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
           +EAI +F  +E  N+ + P+  T  +++PA+  +G+LR   +IH+ +I      +  +  
Sbjct: 393 TEAITLF--LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            ++ MY + G +  +  +F ++     + WN +I  + IHGQG  AL  F +M   G++P
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           +  TFVS+LTACS SGLV EG  +F++M +E+G+ P ++HYGCM DL GR G L     F
Sbjct: 511 NESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I++MP+ P + +WG+LL A R   ++++   A++R+F+++ +N G Y+++S++YA+ G+W
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRW 630

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           E V+ VR L +++GL++T   S +E+++    F  G+ +H +   I++    L+ K+K  
Sbjct: 631 EDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKET 690

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
               ++S+ +          +   HS RLA+ FG+ISS   SPI + KN+R+C  CH+  
Sbjct: 691 DDTRNQSYPVPVATRTTT--MPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHAL 748

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K IS+ + R I+V DS  +H F DG C CGDYW
Sbjct: 749 KLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 258/492 (52%), Gaps = 12/492 (2%)

Query: 41  LENESR--EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           LE+ +R     F  + + C +L  +   +  H +++  G    V++   LV FYA LG +
Sbjct: 99  LEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLV 158

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             +   FD +  R++ TWN M+  YV  G  S A+ CF +      ++ D       L A
Sbjct: 159 EDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAA 218

Query: 156 C---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C    + + GK+IH  V++ G E D+ V  SLL MYC+ G    AR +F  MP+R   +W
Sbjct: 219 CCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N MI GY  +    EA D   +MR EG+ ++ +T  ++L  CA++++ L G  +H Y+V+
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                ++ +   L+ MY K G +  + ++F ++  + +VSWN++IAAY        A   
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  +    + PD  T+ ++      L   R+ R +H +I+  G + E+ +I NAV+ MYA
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLG-YAENTLIMNAVLHMYA 457

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           + G + ++  +F+ +  KDVISWNT+I GYA +G    A+E+F  M+  N + PN+ T+V
Sbjct: 458 RSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFV 516

Query: 453 SILPAYSHVGALRQG-IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP- 510
           S+L A S  G + +G +  +  + +  +   +    C+ D+ G+ G + + +     +P 
Sbjct: 517 SVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPI 576

Query: 511 RSSSVPWNAIIS 522
             +S  W ++++
Sbjct: 577 DPTSRVWGSLLT 588



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 190/418 (45%), Gaps = 37/418 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  ++  G  + +   T L++ Y   G+++++R  F  +  R V TWN MI  Y   
Sbjct: 229 KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            R  EA DCF Q     GL+ +  T   +L AC    + + G+ +H  V++  F   V +
Sbjct: 289 ERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVL 347

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +LL MY + G    + K+F  +  +   SWN MI+ Y       EA+ +  E+  + +
Sbjct: 348 ETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPL 407

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T+++++P      ++     IH YI+  G   N  + N +++MYA+ G +  +  
Sbjct: 408 YPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASRE 467

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD+M+ +DV+SWN++I  Y       TA   F  M+  G+QP+  T VS+      L  
Sbjct: 468 IFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSV------LTA 521

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDMYAKLGIINSACAVFEGLPV 409
           C    SV G +   GW   ++++              + D+  + G +       E +P+
Sbjct: 522 C----SVSGLV-DEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPI 576

Query: 410 KDVIS-WNTLITGYAQNG---LASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVG 462
                 W +L+T         +A  A E +FQ+  +      N G Y+ +   Y+  G
Sbjct: 577 DPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHD------NTGCYIVLSSMYADAG 628


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/708 (37%), Positives = 395/708 (55%), Gaps = 41/708 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHM--YCRFGLANVARKLFDDMPVRDS 209
           + + C +    K+IH  +L+     D + A+ L     +  F   + ARK+FD +P  + 
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIH 267
            SWN +I     S + ++++ +   M L      P   T   ++   A     L G  +H
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRM-LHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVH 263

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME---RDVVSWNSIIAAYEQSN 324
              +K     ++FV N+LI+ YA  G +  A  VF +M+E   +D+VSWNS++  + Q  
Sbjct: 264 GMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVF-EMIEGNNKDIVSWNSMVTGFVQGG 322

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR----------- 373
            P  A   F  M+  G+ P+ +T+VS+ S  A+  +    R V  +I R           
Sbjct: 323 YPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCN 382

Query: 374 ---------------RGWF--ME--DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
                          RG F  ME  DV+    ++D YAK+     A  +F+ +P KD+ +
Sbjct: 383 ATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPA 442

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           WN LI+GY Q+G   EA+ +F+ ++       P+Q T +S L A + +GA+  G  IH  
Sbjct: 443 WNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY 502

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           + K  +  +  +AT L+DMY K G ++ A+ +F+ +       W+A+I+   +HG+G+ A
Sbjct: 503 IKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAA 562

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           +  F  M +  V+P+ +TF +LL ACSHSGLV EG+R F  M+  +G+ P  KHY CMVD
Sbjct: 563 IELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVD 622

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           + GRAGHL  A  FI+ MP+ P AS+WGALLGAC IHGN+EL   A  RL E++  N G 
Sbjct: 623 VLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGA 682

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YVL+SN+YA  G WEGV E+R   RD GLKK  G SSIE++  V  F  G+  HP    I
Sbjct: 683 YVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDI 742

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQ 772
           Y +L  + A+++S GYV +   +LQ VEE+E KE  L  HSE++AIAFG+I +  +  I+
Sbjct: 743 YAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIR 802

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I KNLRVC DCH   K +S++  R+I++RD  RFHHF  G CSC DYW
Sbjct: 803 IVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 171/584 (29%), Positives = 291/584 (49%), Gaps = 57/584 (9%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF--YANLGDLSFSRHTFDHISYRNV 110
           LFQ CT    +K++HA ++ + K+   +++++L     +++   L ++R  FD I   N+
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHC 167
           Y+WN +I          ++V  F +    S   P+ +TFP ++KA    R  + GK +H 
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD--DMPVRDSGSWNAMISGYCQSGNA 225
             +K  F  DVFV  SL+H Y   G  ++A  +F+  +   +D  SWN+M++G+ Q G  
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYP 324

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            +ALD+ + MR EGV  + +T+ S++  CA++ N+  G  +  YI ++ +  NL V N  
Sbjct: 325 DKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNAT 384

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSI----------------------------- 316
           I+M+ K G +  A  +FD M +RDVVSW +I                             
Sbjct: 385 IDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN 444

Query: 317 --IAAYEQSNDPITAHGFFTTMQ--QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
             I+ YEQS  P  A   F  +Q  ++G +PD +TL+S  S  AQL        +HG+I 
Sbjct: 445 VLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYI- 503

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           ++     +  +  +++DMY+K G +  A  VF  +  KDV  W+ +I G A +G    AI
Sbjct: 504 KKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAI 563

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----C 488
           E+F  M+E  ++ PN  T+ ++L A SH G + +G ++   + +    + V   T    C
Sbjct: 564 ELFLDMQE-TQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER---VYGVVPKTKHYSC 619

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
           +VD+ G+ G +++A+     +P + S   W A++    IHG  + A     ++L+  + P
Sbjct: 620 MVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLE--IEP 677

Query: 548 -DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            +H  +V L    + +G   EG         + G+K   K  GC
Sbjct: 678 GNHGAYVLLSNLYAKTG-DWEGVSELRQQMRDSGLK---KETGC 717



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 10/274 (3%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D+F  C ++   + L   +    + + V S T +++ YA + +   +R  FD +  +++ 
Sbjct: 386 DMFVKCGEVEIARGLFDNM----EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNL--VD-GKKIHC 167
            WN +IS Y + GR  EA+  F +  LT SG RPD  T    L AC  L  +D G+ IH 
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            + K   + +  +A SL+ MY + G    A ++F  +  +D   W+AMI+G    G    
Sbjct: 502 YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEA 561

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLI 286
           A+++  +M+   V  + +T  ++L  C+ S  +  G  +   + + +G+       + ++
Sbjct: 562 AIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMV 621

Query: 287 NMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           ++  + G +  AL+  + M +      W +++ A
Sbjct: 622 DVLGRAGHLEEALKFIEGMPLAPSASVWGALLGA 655


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/693 (35%), Positives = 405/693 (58%), Gaps = 12/693 (1%)

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           Y+  L  G RPD +TFP V+K C  L    +G+  H  V+KLG E DV+   SL+  Y +
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR--LEGVSMDPITVA 248
            GL   A ++FD MPVRD  +WN M+ GY  +G    AL    EM   LE V  D + + 
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALE-VQHDSVGII 213

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           + L  C    + + G  IH Y+++HGLE ++ V  +L++MY K G + +A  VF  M  R
Sbjct: 214 AALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
            VV+WN +I  Y  +  P  A   F  M+  G+Q +++T ++L +  AQ       RSVH
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
           G+++RR  F+  V++  A+++MY K+G + S+  +F  +  K ++SWN +I  Y    + 
Sbjct: 334 GYVVRR-QFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMY 392

Query: 429 SEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
           +EAI +F  +E  N+ + P+  T  +++PA+  +G+LR   +IH+ +I      +  +  
Sbjct: 393 TEAITLF--LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            ++ MY + G +  +  +F ++     + WN +I  + IHGQG  AL  F +M   G++P
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           +  TFVS+LTACS SGLV EG  +F++M +E+G+ P ++HYGCM DL GR G L     F
Sbjct: 511 NESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I++MP+ P + +WG+LL A R   ++++   A++R+F+++ +N G Y+++S++YA+ G+W
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRW 630

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           E V+ VR L +++GL++T   S +E+++    F  G+ +H +   I++    L+ K++  
Sbjct: 631 EDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEET 690

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
               ++S+ +          +   HS RLA+ FG+ISS   SPI + KN+R+C  CH+  
Sbjct: 691 DDTRNQSYPVPVATRTTT--MPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHHAL 748

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K IS+ + R I+V DS  +H F DG C CGDYW
Sbjct: 749 KLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 259/492 (52%), Gaps = 12/492 (2%)

Query: 41  LENESR--EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           LE+ +R     F  + + C +L  +   +  H +++  G    V++   LV FYA LG +
Sbjct: 99  LEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLV 158

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             +   FD +  R++ TWN+M+  YV  G  S A+ CF +      ++ D       L A
Sbjct: 159 EDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAA 218

Query: 156 C---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C    + + GK+IH  V++ G E D+ V  SLL MYC+ G    AR +F  MP+R   +W
Sbjct: 219 CCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N MI GY  +    EA D   +MR EG+ ++ +T  ++L  CA++++ L G  +H Y+V+
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
                ++ +   L+ MY K G +  + ++F ++  + +VSWN++IAAY        A   
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  +    + PD  T+ ++      L   R+ R +H +I+  G + E+ +I NAV+ MYA
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLG-YAENTLIMNAVLHMYA 457

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           + G + ++  +F+ +  KDVISWNT+I GYA +G    A+E+F  M+  N + PN+ T+V
Sbjct: 458 RSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFV 516

Query: 453 SILPAYSHVGALRQG-IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP- 510
           S+L A S  G + +G +  +  + +  +   +    C+ D+ G+ G + + +     +P 
Sbjct: 517 SVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPI 576

Query: 511 RSSSVPWNAIIS 522
             +S  W ++++
Sbjct: 577 DPTSRVWGSLLT 588


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/573 (41%), Positives = 346/573 (60%), Gaps = 3/573 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           AS+L  C     I  G  +H  +   G  F+  ++  L+N+Y     +  A  +FD++ +
Sbjct: 79  ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
            ++  WN +I  Y  +     A   +  M   G+ PD  T   +    A L+   + R +
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H  +++ GW  +DV +G A++DMYAK G + SA  VF+ + V+D + WN+++  Y+QNG 
Sbjct: 199 HEHVVQTGW-EKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGH 257

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
               + +   M     + P + T V+ + A +   AL QG ++H    +        V T
Sbjct: 258 PDACLSLCSEMV-LTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKT 316

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            LVDMY KCG +  A +LF ++     V WNA+I+ + +HG   +AL+ F +M +   +P
Sbjct: 317 ALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKP 375

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           DHITFV +L+ACSH GL+ EG  +F  M  ++ I P ++HY CMVDL G +G L  A+N 
Sbjct: 376 DHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL 435

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I  M V PD+ +WGALL +C+IH N+ELG +A +RL E++ ++ G YV++SNIYA  GKW
Sbjct: 436 IMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKW 495

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           EGV ++R L  DR LKK+   S IEV NKV  F +G+ +HP  ++IY EL  +   MK  
Sbjct: 496 EGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEA 555

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GY P    V  DVE+DEK +++ SHSERLAIAFG+IS+PP + + I KNLR+C DCH   
Sbjct: 556 GYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAI 615

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KFIS+ITEREI VRD NR+HHFKDG+CSCGDYW
Sbjct: 616 KFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/397 (35%), Positives = 213/397 (53%), Gaps = 12/397 (3%)

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
           ++ L P +  +  +L++C   + +  GK++H  V   GF +D  +A  L+++YC     +
Sbjct: 68  STCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS 127

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR LFD +P  +   WN +I GY  +G    A+ +  +M   G+  D  T   +L  CA
Sbjct: 128 SARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACA 187

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               I  G  IH ++V+ G E ++FV   LI+MYAK G +  A  VFD+++ RD V WNS
Sbjct: 188 ALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNS 247

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           ++AAY Q+  P       + M   G++P   TLV+  S  A        R +HG   R+ 
Sbjct: 248 MLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQE 307

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +   D  +  A+VDMYAK G +  A  +FE L VK V+SWN +ITGYA +G A+EA+++F
Sbjct: 308 FESHDK-VKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLF 366

Query: 436 QMMEECNEI-NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDM 492
              EE N +  P+  T+V +L A SH G L +G      +I++    D  V   TC+VD+
Sbjct: 367 ---EEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRD-YKIDPTVQHYTCMVDL 422

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
            G  GR+D+A +L  Q+     S  W A+++   IH 
Sbjct: 423 LGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHA 459



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 208/470 (44%), Gaps = 60/470 (12%)

Query: 18  PLLQAHRPLFSAAANSLQISPDCLENESREI-------DFDDLFQSCTKLHHVK---RLH 67
           P   +  P F      L+  P C    +          ++  L QSC     +K   +LH
Sbjct: 39  PSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLH 98

Query: 68  ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           A + ++G       +TKLVN Y     LS +R  FD I   N++ WN +I  Y   G   
Sbjct: 99  AQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYE 158

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASL 184
            AV  +YQ     GL PD +TFP VLKAC  L     G++IH  V++ G+E DVFV A+L
Sbjct: 159 AAVQLYYQM-FDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAAL 217

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           + MY + G    AR++FD + VRD+  WN+M++ Y Q+G+    L +  EM L G+    
Sbjct: 218 IDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTE 277

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
            T+ + +   A +  +  G  +H    +   E +  V   L++MYAK G +R A  +F++
Sbjct: 278 ATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFER 337

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           +  + VVSWN++I  Y        A   F  M +   +PD +T V + S  +        
Sbjct: 338 LGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACS-------- 388

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
              HG ++  GW   + +I +  +D                      V  +  ++     
Sbjct: 389 ---HGGLLEEGWMFFETMIRDYKID--------------------PTVQHYTCMVDLLGH 425

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           +G   EA  +   M    ++ P+ G +          GAL    KIHA V
Sbjct: 426 SGRLDEAYNLIMQM----KVLPDSGVW----------GALLNSCKIHANV 461



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 2/193 (1%)

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           E   + P    Y S+L +     A++ G ++HA+V      FD  +AT LV++Y  C  +
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             A  LF ++P+ +   WN +I  +  +G  + A+  + QM D G+ PD+ TF  +L AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           +    +  G R  H    + G +  +     ++D++ + G +G A      + VR DA +
Sbjct: 187 AALSAIEHG-REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR-DAVL 244

Query: 620 WGALLGACRIHGN 632
           W ++L A   +G+
Sbjct: 245 WNSMLAAYSQNGH 257


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/699 (37%), Positives = 401/699 (57%), Gaps = 11/699 (1%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     + ++CT+L  V++   LH  +V SG  + V+  T L++FY+  G++  +R  FD
Sbjct: 129 EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 188

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLV 160
            +S +   TW ++I+ Y +CGR + +++ F Q   T+ + PD Y    VL AC     L 
Sbjct: 189 QLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETN-VVPDRYVVSSVLSACSMLEFLE 247

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+IH  VL+ G E DV V   L+  Y +       RKLFD M V++  SW  MISGY 
Sbjct: 248 GGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYM 307

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+    EA+ +  EM   G   D     S+L  C   + +  G  +H Y +K  LE + F
Sbjct: 308 QNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 367

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V N LI+MYAK  ++  A +VFD M E++V+S+N++I  Y        A   F  M+   
Sbjct: 368 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 427

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             P LLT VSL  + A L     S+ +HG I++ G  + D+  G+A++D+Y+K   +  A
Sbjct: 428 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSL-DLFAGSALIDVYSKCSYVKDA 486

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE +  KD++ WN +  GY Q+    EA++++  ++   +  PN+ T+ +++ A S+
Sbjct: 487 RHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ-KPNEFTFAALITAASN 545

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + +LR G + H +++K  L F  FV   LVDMY KCG I++A  +F        V WN++
Sbjct: 546 LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSM 605

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS H  HG+ ++AL  FR+M+ EG++P+++TFV++L+ACSH+G V +G  +F+ M   FG
Sbjct: 606 ISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFG 664

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           IKP  +HY C+V L GR+G L  A  FI+ MP+ P A +W +LL ACRI GN+ELG  A+
Sbjct: 665 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAA 724

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +     D ++ G Y+L+SNI+A+ G W  V +VR       + K PG S IEVNNKV++F
Sbjct: 725 EMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVF 784

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
              + TH + + I   L  L   +K  GYVPD + +L +
Sbjct: 785 IARDTTHREAD-IGSVLDILIQHIKGAGYVPDATALLMN 822



 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 313/631 (49%), Gaps = 31/631 (4%)

Query: 9   KDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHA 68
           +D   C  +P L+  R  F   AN LQ+S                  S   + H K +H 
Sbjct: 12  EDENPCLQIPNLRPKRREF---ANLLQLSI-----------------SRNPIIHYKIIHG 51

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
            ++VSG     F +  L+N  +    +  +R  FD + ++N+ TW+SM+S+Y + G   E
Sbjct: 52  QIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEE 111

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLL 185
           A+  F      SG  P+ +    V++AC  L     G ++H  V++ GF+ DV+V  SL+
Sbjct: 112 ALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLI 171

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
             Y + G    AR +FD +  + + +W  +I+GY + G +  +L++  +MR   V  D  
Sbjct: 172 DFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRY 231

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            V+S+L  C+  + +  G  IH Y+++ G E ++ V N LI+ Y K   ++   ++FDQM
Sbjct: 232 VVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM 291

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           + ++++SW ++I+ Y Q++    A   F  M + G +PD     S+ +           R
Sbjct: 292 VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGR 351

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VH + ++      D  + N ++DMYAK  ++  A  VF+ +  ++VIS+N +I GY+  
Sbjct: 352 QVHAYTIKAN-LESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQ 410

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
              SEA+E+F  M       P+  T+VS+L   + + AL    +IH  +IK  +  D+F 
Sbjct: 411 EKLSEALELFHEM-RVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFA 469

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            + L+D+Y KC  + DA  +F ++     V WNA+   +  H + ++AL  +  +     
Sbjct: 470 GSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ 529

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK--PHLKHYGCMVDLFGRAGHLGM 603
           +P+  TF +L+TA S+   +  GQ+ FH    + G+   P + +   +VD++ + G +  
Sbjct: 530 KPNEFTFAALITAASNLASLRHGQQ-FHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEE 586

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           A     N  +  D   W +++     HG  E
Sbjct: 587 ARKMF-NSSIWRDVVCWNSMISTHAQHGEAE 616


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/617 (39%), Positives = 376/617 (60%), Gaps = 3/617 (0%)

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSG 263
           P   +  +N ++     +G+  +AL +  EM  +  V  D  TVA  L  C+R   +  G
Sbjct: 79  PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             I  Y VK GL  + FV ++LI+MYA    +  A  +FD + E  VV WN+II AY ++
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            + +     F  M + G+  D +TLVS+ +   ++ D +  + V  ++  +G  + +  +
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKG-LVRNRNL 257

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
             A++DMYAK G +  A  +F+G+  +DV++W+ +I+GY Q     EA+ +F  M+   E
Sbjct: 258 MTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQ-LAE 316

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN  T VS+L A + +GAL  G  +H+ + +  L   + + T LVD Y KCG IDDA+
Sbjct: 317 VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAV 376

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
             F  +P  +S  W A+I     +G+G +AL  F  M    + P  +TF+ +L ACSHS 
Sbjct: 377 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV EG+R+F  M +++GIKP  +HYGC+VDL GRAG +  A+ FI+ MP+ P+A IW AL
Sbjct: 437 LVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           L +C +H N+E+G  A  ++  ++  + G Y+L+SNIYA+VG+W+    +R   +DRG++
Sbjct: 497 LSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIE 556

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           KTPG S IE++  V  F+  +  HP+ ++IY ++  +  ++K  GY+P+ + V  +V+E 
Sbjct: 557 KTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEH 616

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EKE  ++ HSE+LAIAFG++   P + I++ KNLRVC DCH+ TK IS++  REI+VRD 
Sbjct: 617 EKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDR 676

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHFKDG CSC DYW
Sbjct: 677 NRFHHFKDGTCSCNDYW 693



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 248/506 (49%), Gaps = 23/506 (4%)

Query: 58  TKLHHVKRLHALLVVSGKI----KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           T   ++ +LHA L+ SG++    K   S  +       L   + S          +   +
Sbjct: 27  TDPRYLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCY 86

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           N ++   +  G   +A+  F +    + + PD +T    LK+C  +     G+ I    +
Sbjct: 87  NVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAV 146

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G   D FV +SL+HMY        A+ LFD +       WNA+I+ Y ++GN +E ++
Sbjct: 147 KRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVE 206

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +   M   GV+ D IT+ S++  C R  +   G  +  Y+ + GL  N  +   LI+MYA
Sbjct: 207 MFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYA 266

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  A R+FD M  RDVV+W+++I+ Y Q++    A   F+ MQ A ++P+ +T+VS
Sbjct: 267 KCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVS 326

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           + S  A L      + VH +I RR      +I+G A+VD YAK G I+ A   FE +PVK
Sbjct: 327 VLSACAVLGALETGKWVHSYI-RRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +  +W  LI G A NG   EA+E+F  M + + I P   T++ +L A SH   + +G   
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKAS-IEPTDVTFIGVLMACSHSCLVEEG--- 441

Query: 471 HARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC 523
             R   + +  D  +        C+VD+ G+ G ID+A      +P   ++V W A++S 
Sbjct: 442 --RRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSS 499

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDH 549
             +H   +      +Q++   + P H
Sbjct: 500 CAVHKNVEIGEEALKQIV--SLNPSH 523


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 275/797 (34%), Positives = 423/797 (53%), Gaps = 36/797 (4%)

Query: 53  LFQSCTKL---HHVKRLHALLVVSGKI-------KTVFSSTKLVNFYANLGDLSFSRHTF 102
           L + C +L    H KRLHA +  SG +          F    LV  Y   G    ++  F
Sbjct: 20  LLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNL 159
           D I+++N+++W S++  Y   G  ++A++ F+Q  + +G+ PD   F   L  C   + L
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQM-IKAGVEPDRLVFLAALNVCGILKRL 138

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
            DG  IH  +     + D+ +  +L+ MY + G  ++A++LFD + +++  SW  ++S +
Sbjct: 139 EDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVF 198

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS--GLLIHLYIVKHGLEF 277
            ++G   E   +L  M +EG+  D + + ++L VC+ S  +L     + H YIV  GL+ 
Sbjct: 199 AENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCS-SRGVLDEDSWMAHDYIVGSGLDR 257

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERD---VVSWNSIIAAYEQSNDPITAHGFFT 334
              V+  L++M+A+ G +  A  +F+++ +     +  WN++I AY        A     
Sbjct: 258 EAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLD 317

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           ++Q  G++P+ +T +S     + L D    R++H  I   G F  +V + NA+V MY + 
Sbjct: 318 SLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESG-FDREVSVANALVTMYGRC 373

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G +  +  +F  +  KD+ SWN+ I  +A +G + E I++   M     + P+  T V+ 
Sbjct: 374 GSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTA 433

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           + A   +       ++H R  +  L  +  VA  LVDMYGK G +D A  +F +  R + 
Sbjct: 434 MSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNV 493

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
             WNA+   +   G     L   R M  +G RPD +TFVSLL+ C HSGL+ E +  F  
Sbjct: 494 TTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVA 553

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS--IWGALLGACRIHGN 632
           M+ EFGI P  KHY C++DL  RAG L  A +FI  + V   AS  +W ALLGACR  G+
Sbjct: 554 MRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGD 613

Query: 633 MELGAVASDRLFEVDSENV---------GYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
                        +D E +           +V ++NI A  G W+    +R    ++GL+
Sbjct: 614 SSS-RARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLR 672

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K PG S I V N++  F  G+R HP+ E+IY ELR L   M   GYV D   V  +V E 
Sbjct: 673 KEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEA 732

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           +K  +L  HSE+LA+AFG++S+PP S ++I KNLR CGDCH   K IS I  REI+VRDS
Sbjct: 733 DKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDS 792

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHF++G CSCGDYW
Sbjct: 793 NRFHHFRNGSCSCGDYW 809



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 13/232 (5%)

Query: 32  NSLQ---ISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF 88
           +SLQ   + P+C       I F     +C+ L   + LH L+  SG  + V  +  LV  
Sbjct: 317 DSLQLQGVKPNC-------ITFISSLGACSSLQDGRALHLLIDESGFDREVSVANALVTM 369

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           Y   G L  S   F  ++ +++ +WNS I+ +   GR  E +    Q     GL P   T
Sbjct: 370 YGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVT 429

Query: 149 FPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
               + AC  L D    K++H    +LG E +  VA  L+ MY + G  + AR +FD   
Sbjct: 430 LVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRAL 489

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            R+  +WNAM   Y Q G     L ++  M+ +G   D +T  S+L VC  S
Sbjct: 490 RRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHS 541


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/660 (38%), Positives = 368/660 (55%), Gaps = 40/660 (6%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           + +H  ++      +  +   L+  Y        ARK+FD++P R+    N MI  Y  +
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G   E + +   M    V  D  T   +L  C+ S  I+ G  IH    K GL   LFV 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++MY K G +  A  V D+M  RDVVSWNS++  Y Q+     A      M+   I 
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D  T+ SL   V+                      E+V+    V DM+ K+G       
Sbjct: 239 HDAGTMASLLPAVSNTT------------------TENVMY---VKDMFFKMG------- 270

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
                  K ++SWN +I  Y +N +  EA+E++  ME  +   P+  +  S+LPA     
Sbjct: 271 ------KKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSITSVLPACGDTS 323

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G KIH  + +  L  ++ +   L+DMY KCG ++ A  +F  +     V W A+IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G  G+G  A+  F ++ D G+ PD I FV+ L ACSH+GL+ EG+  F +M + + I 
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P L+H  CMVDL GRAG +  A+ FIQ+M + P+  +WGALLGACR+H + ++G +A+D+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LF++  E  GYYVL+SNIYA  G+WE V  +R++ + +GLKK PG S++EVN  +  F  
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+R+HP+ ++IY EL  L  KMK LGYVPD    L DVEE++KE  L  HSE+LAI F +
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFAL 623

Query: 763 ISSPPK-----SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +++  +     + I+I KNLR+CGDCH   K ISQIT REII+RD+NRFH F+ G+CSC 
Sbjct: 624 MNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 229/464 (49%), Gaps = 57/464 (12%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL+  YA+L D++ +R  FD I  RNV   N MI  YV  G   E V  F        +R
Sbjct: 79  KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVR 137

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YTFP VLKAC     +V G+KIH S  K+G    +FV   L+ MY + G  + AR +
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            D+M  RD  SWN+++ GY Q+    +AL++  EM    +S D  T+AS+LP  + +   
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--- 254

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                                + N+  MY K         +F +M ++ +VSWN +I  Y
Sbjct: 255 --------------------TTENV--MYVK--------DMFFKMGKKSLVSWNVMIGVY 284

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            ++  P+ A   ++ M+  G +PD +++ S+       +     + +HG+I R+   + +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK-LIPN 343

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           +++ NA++DMYAK G +  A  VFE +  +DV+SW  +I+ Y  +G   +A+ +F  +++
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVAT-------CLVD 491
              + P+   +V+ L A SH G L +G        ++C  L  D +  T       C+VD
Sbjct: 404 SGLV-PDSIAFVTTLAACSHAGLLEEG--------RSCFKLMTDHYKITPRLEHLACMVD 454

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
           + G+ G++ +A      +    +   W A++    +H   D  L
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/579 (41%), Positives = 366/579 (63%), Gaps = 5/579 (0%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           MDP    S L  C    NI     +H  +   G+  +L V+N L+ M AK   +  A  +
Sbjct: 1   MDPDFFISTLFKCR---NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLL 57

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F++M ERD VSW+ +I  + ++ D       F  + +AG +PD  +L  +          
Sbjct: 58  FNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGL 117

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              R +H  +++ G  +++ +  + +VDMYAK G+I++A  +F+ +P KD+++   +I G
Sbjct: 118 IMGRLIHSTVLKNGLHLDNFVC-STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           YA+ G  +E+  +F  M   +   P++   V+I+ A + +GA+ +   +H  V       
Sbjct: 177 YAECGKPNESWVLFDQMRR-DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL 235

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV + T ++DMY KCG ID +  +F ++ + + + W+A+I  +G HGQG +AL  F  ML
Sbjct: 236 DVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMML 295

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           + G+ P+ ITF+SLL ACSH+GLV +G + F +M   +G++P +KHY CMVDL GRAG L
Sbjct: 296 NSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRL 355

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A   I+NM V  D  IW A LGACRIH  ++L   A+  L  + ++N G+Y+L+SNIY
Sbjct: 356 DQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIY 415

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           AN G+W+ V ++R+L   R LKK PG++ IEV+N +  F  G+ +H +  +IY+ L++L+
Sbjct: 416 ANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLS 475

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
            K++S GYVPD + VL DV+E+ K  IL +HSE+LAIAFG+I++P  +PI+I KNLRVCG
Sbjct: 476 QKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCG 535

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH++ K +S IT+R+IIVRD+NRFHHFK+GICSCGDYW
Sbjct: 536 DCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 229/421 (54%), Gaps = 9/421 (2%)

Query: 142 LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           + PDF  F   L  CRN+   K++H  V   G   D+ VA  LL+M  +      A  LF
Sbjct: 1   MDPDF--FISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLF 58

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           + M  RD  SW+ MI G+ ++G+         E+   G   D  ++  ++  C  +  ++
Sbjct: 59  NKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI 118

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G LIH  ++K+GL  + FV + L++MYAK GM+ +A ++FD+M ++D+V+   +IA Y 
Sbjct: 119 MGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYA 178

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +   P  +   F  M++ G  PD + +V++ +  A+L     +R VH ++  R + + DV
Sbjct: 179 ECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL-DV 237

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            +G A++DMYAK G I+S+  +F+ +  K+VISW+ +I  Y  +G   EA+E+F MM   
Sbjct: 238 ELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN- 296

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGRID 500
           + I PN+ T++S+L A SH G +  G+++ + + +   +  DV   TC+VD+ G+ GR+D
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356

Query: 501 DAMSLF--YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLT 557
            A+ L    +V +   + W A +    IH Q D A    + +L  +   P H   +S + 
Sbjct: 357 QALRLIENMEVEKDEGI-WCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIY 415

Query: 558 A 558
           A
Sbjct: 416 A 416



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 211/431 (48%), Gaps = 13/431 (3%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
            C  +  +K++HA +  +G I  +  + KL+   A   DL  +   F+ +  R+  +W+ 
Sbjct: 12  KCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSV 71

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           MI  +V+ G        F +  + +G +PD ++ P V+KACR+   L+ G+ IH +VLK 
Sbjct: 72  MIGGFVKNGDYERCFQTFREL-IRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKN 130

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G   D FV ++L+ MY + G+ + A++LFD MP +D  +   MI+GY + G   E+  + 
Sbjct: 131 GLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLF 190

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           D+MR +G   D + + +I+  CA+   +    L+H Y+       ++ +   +I+MYAK 
Sbjct: 191 DQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKC 250

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  +  +FD+M +++V+SW+++I AY        A   F  M  +GI P+ +T +SL 
Sbjct: 251 GSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLL 310

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KD 411
              +      +   +   +        DV     +VD+  + G ++ A  + E + V KD
Sbjct: 311 YACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKD 370

Query: 412 VISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
              W   +     + Q  LA +A ++   ++       N G Y+ +   Y++ G  +   
Sbjct: 371 EGIWCAFLGACRIHRQVDLAEKAAKLLLSLQ-----TQNPGHYILLSNIYANAGRWKDVA 425

Query: 469 KIHARVIKNCL 479
           KI   + K  L
Sbjct: 426 KIRNLMAKRRL 436


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/657 (38%), Positives = 377/657 (57%), Gaps = 35/657 (5%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A  +F+ +   +   WN MI G+  S + V +L +   M   G+  +  T   +L  CA+
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY--------------------------- 289
           S     G  IH  ++K G + +L+V  +LI+MY                           
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 290 ----AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
               A  G +R A ++FD++  +DVVSWN++I+ Y ++     A   F  M +  ++PD 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T V++ S  A        R VH ++   G F  ++ I NA++D+Y+K G + +AC +F+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHG-FDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           GL  KDVISWNTLI GY    L  EA+ +FQ M    E  PN  T +S+LPA +H+GA+ 
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSVLPACAHLGAID 314

Query: 466 QGIKIHARVIKNC--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
            G  IH  + K    +     + T L+DMY KCG I+ A  +F  +   S   WNA+I  
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
             +HG+ D + + F +M   G+ PD ITFV LL+ACSHSG++  G+  F  M +++ + P
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            L+HYGCM+DL G +G    A   I  M + PD  IW +LL AC++HGN+EL    +  L
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            +++ EN   Y+L+SNIYA+ G+WE V  +R+L   + +KK PG SSIEV++ V  F  G
Sbjct: 495 IKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVG 554

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           ++ HP+  +IY  L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+I
Sbjct: 555 DKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 614

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+ P + + I KNLRVC +CH  TK +S+I +REI+ RD  RFHHF+DG+CSC DYW
Sbjct: 615 STKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 250/500 (50%), Gaps = 41/500 (8%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L ++   F+ I   N   WN+MI  +        ++   Y   ++ GL P+ YTFP +LK
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSL-TLYVCMVSLGLLPNSYTFPFLLK 72

Query: 155 AC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR--------------------- 190
           +C   +   +G++IH  VLKLGF+ D++V  SL+ MY +                     
Sbjct: 73  SCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVS 132

Query: 191 ----------FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
                      G    A+KLFD++PV+D  SWNAMISGY ++G   EAL++ +EM    V
Sbjct: 133 YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T  ++L  CA S +I  G  +H ++  HG + NL + N LI++Y+K G +  A  
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F  +  +DV+SWN++I  Y   N    A   F  M ++G  P+ +T++S+    A L  
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312

Query: 361 CRNSRSVHGFIMRRGWFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
               R +H +I +R   + +   +  +++DMYAK G I +A  VF  +  K + SWN +I
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC- 478
            G+A +G A  + ++F  M +   I P+  T+V +L A SH G L  G  I   + ++  
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIG-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYK 431

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFF 537
           +   +    C++D+ G  G   +A  +   +      V W +++    +HG  + A +F 
Sbjct: 432 MTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFA 491

Query: 538 RQMLDEGVRPDHITFVSLLT 557
           + ++   + P++ +   LL+
Sbjct: 492 QNLIK--IEPENPSSYILLS 509



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 188/375 (50%), Gaps = 35/375 (9%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  + +A  VF+ + E + + WN++I  +  S+DP+++   +  M   G+ P+  T   L
Sbjct: 11  FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRG------------------WFME------------DV 381
               A+       + +HG +++ G                  W +E            DV
Sbjct: 71  LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A++  YA  G I SA  +F+ +PVKDV+SWN +I+GYA+ G   EA+E+F+ M + 
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N + P++ TYV++L A +H G++  G ++H+ V  +    ++ +   L+D+Y KCG ++ 
Sbjct: 191 N-VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVET 249

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  +     + WN +I  +       +AL  F++ML  G  P+ +T +S+L AC+H
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309

Query: 562 SGLVSEGQRYFHMMQEEF--GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
            G +  G R+ H+  ++   G+         ++D++ + G +  AH    +M +    S 
Sbjct: 310 LGAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSS 367

Query: 620 WGALLGACRIHGNME 634
           W A++    +HG  +
Sbjct: 368 WNAMIFGFAMHGRAD 382



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 196/409 (47%), Gaps = 9/409 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ GD+  ++  FD I  ++V +WN+MIS Y   G   EA++ F + 
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            +   +RPD  T+  VL AC    ++  G+++H  V   GF+ ++ +  +L+ +Y + G 
Sbjct: 188 -MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE 246

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF  +  +D  SWN +I GY       EAL +  EM   G + + +T+ S+LP 
Sbjct: 247 VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPA 306

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VF+ M+ + + 
Sbjct: 307 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLS 366

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        +   F+ M++ GI+PD +T V L S  +        R +   +
Sbjct: 367 SWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 426

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            +       +     ++D+    G+   A  +   + ++ D + W +L+     +G    
Sbjct: 427 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 486

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           A    Q + +    NP+  +Y+ +   Y+  G      +I A +   C+
Sbjct: 487 AESFAQNLIKIEPENPS--SYILLSNIYASAGRWEDVARIRALLNGKCM 533


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/709 (35%), Positives = 389/709 (54%), Gaps = 66/709 (9%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           +VF   SLL M+ + G    AR +F +MP RD+ SW  M+ G  ++G   EA+  L +M 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK----- 291
            +G +    T+ ++L  CA +     G  +H ++VK GL   + V+N+++NMY K     
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSE 216

Query: 292 --------------------------FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                                      G M  A  +F+ M +R +VSWN++IA Y Q+  
Sbjct: 217 TATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGL 276

Query: 326 PITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF------- 377
              A   F+ M  ++ + PD  T+ S+ S  A L + R  + VH +I+R           
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 378 ----------------------ME---DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                                 ME   +VI   A+++ Y K+G + SA  +F  +  +DV
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++W  +I GY QNG   EAI++F+ M  C    PN  T  ++L   + +  L  G +IH 
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGP-EPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           R I++ L     V+  ++ MY + G    A  +F QV  R  ++ W ++I     HGQG+
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +ML  GV PD IT+V +L+ACSH+G V+EG+RY+  ++ E  I P + HY CM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL  RAG    A  FI+ MPV PDA  WG+LL ACR+H N EL  +A+++L  +D  N 
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y  ++N+Y+  G+W     +    +++ ++K  G+S   + +K+ +F   +  HP+ +
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            +Y     +  ++K  G+VPD   VL DV+++ KE +L+ HSE+LAIAFG+IS+P K+ +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ KNLRVC DCH   K IS++T+REIIVRD+ RFHHF+DG+CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 204/488 (41%), Gaps = 103/488 (21%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF----GMMRHALRVFD 303
           A +L +C  + N  +G  IH   VK GL  + ++ NNL++ Y +     G +R A R+FD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 304 Q--MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA---------------------- 339
           +  +  R+V +WNS+++ + +S     A G F  M +                       
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAI 149

Query: 340 ---------GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
                    G  P   TL ++ S  A        R VH F+++ G     V + N+V++M
Sbjct: 150 KTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNM 208

Query: 391 YAKLGIINSACAVFEGLPVKDV-------------------------------ISWNTLI 419
           Y K G   +A  VFE +PV+ V                               +SWN +I
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY QNGL ++A+++F  M   + + P++ T  S+L A +++G +R G ++HA +++  +
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS--------------------------- 512
            ++  V   L+  Y K G +++A  +  Q   +                           
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388

Query: 513 ------SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
                   V W A+I  +  +G+ D+A++ FR M+  G  P+  T  ++L+ C+    + 
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G++  H       ++        ++ ++ R+G    A      +  R +   W +++ A
Sbjct: 449 YGKQ-IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 507

Query: 627 CRIHGNME 634
              HG  E
Sbjct: 508 LAQHGQGE 515



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN-VYTWNSMIS 118
           L + K++H   + S   ++   S  ++  YA  G   ++R  FD + +R    TW SMI 
Sbjct: 447 LDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL---KL 172
              + G+  EAV  F +  L +G+ PD  T+  VL AC +   + +GK+ +  +    ++
Sbjct: 507 ALAQHGQGEEAVGLFEEM-LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQI 565

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDI 231
             E   +  A ++ +  R GL + A++    MPV  D+ +W +++S  C+     E  ++
Sbjct: 566 APEMSHY--ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA-CRVHKNAELAEL 622

Query: 232 LDEMRLEGVSMDP------ITVASILPVCAR 256
             E  L   S+DP        +A++   C R
Sbjct: 623 AAEKLL---SIDPNNSGAYSAIANVYSACGR 650


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/709 (36%), Positives = 390/709 (55%), Gaps = 66/709 (9%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           + F   SLL +Y + G    A  +F +MP RD+ SW  MI G  +SG   +A+    +M 
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG--- 293
            EG +    T+ ++L  CA  +    G  +H ++VK GL   + V+N+++ MY K G   
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399

Query: 294 ----------------------------MMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                                        M  A+ +F+ M+ER +VSWN+IIA Y Q+  
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459

Query: 326 PITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-------- 376
              A  FF+ M  A  ++PD  T+ S+ S  A L   +  + +H +I+R G         
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519

Query: 377 -----------------FMEDVIIGN-------AVVDMYAKLGIINSACAVFEGLPVKDV 412
                             M+  ++ +       A+++ Y KLG    A  +F+ +  +DV
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           I+W  +I GY QNG   EA+E+F+ M       PN  T  ++L A + +  L  G +IH 
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGP-EPNSHTLAAVLSACASLAYLDYGKQIHC 638

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           + I++     V V+  ++ +Y + G +  A  +F Q+  R  ++ W ++I     HG G+
Sbjct: 639 KAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGE 698

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +M+  GV+PDHIT+V +L+AC+H+G V +G+RY+  MQ E GI P + HY CM
Sbjct: 699 QAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACM 758

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL  RAG L  AH FIQ MPV PD  +WG+LL ACR+  N +L  +A+ +L  +D  N 
Sbjct: 759 VDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNS 818

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y  ++N+Y+  G+W     +  L +D+G+KK  G+S   V  KV +F   +  HP+ +
Sbjct: 819 GAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRD 878

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            IY +   +  ++K  G+VPD + VL DV+++ KE +L+ HSE+LAIAFG+IS+P K+ +
Sbjct: 879 SIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 938

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLRVC DCH   KFIS+  +REIIVRD+ RFHHF+DG CSC DYW
Sbjct: 939 RIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/504 (23%), Positives = 199/504 (39%), Gaps = 111/504 (22%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR------- 300
           A +L +C  + N  +G  IH + VK GL  + ++ NNL+  YA  G+ R   R       
Sbjct: 213 ARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFD 272

Query: 301 ------------------------------VFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
                                         VF +M +RD VSW  +I    +S     A 
Sbjct: 273 DIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAV 332

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M   G  P   TL ++ S  A +  C   R VH F+++ G     V + N+V+ M
Sbjct: 333 KTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG-LSSCVPVANSVLYM 391

Query: 391 YAKLGIINSACAVFEGLPVKDV-------------------------------ISWNTLI 419
           Y K G   +A AVFE + V+ V                               +SWNT+I
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY QNGL   A++ F  M   + + P+  T  S+L A +++  L+ G ++H+ +++  +
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGM 511

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQ------------------------------- 508
                +   L+  Y K G ++ A  +  Q                               
Sbjct: 512 PCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIF 571

Query: 509 --VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +     + W A+I  +  +GQ D+A+  FR M+  G  P+  T  ++L+AC+    + 
Sbjct: 572 DIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLD 631

Query: 567 EGQ----RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
            G+    +    +QE+      +     ++ ++ R+G + +A      +  R +   W +
Sbjct: 632 YGKQIHCKAIRSLQEQ-----SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTS 686

Query: 623 LLGACRIHGNMELGAVASDRLFEV 646
           ++ A   HG  E   V  + +  V
Sbjct: 687 MIVAMAQHGLGEQAVVLFEEMVRV 710



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 20/219 (9%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C  L ++   K++H   + S + ++V  S  ++  YA  G +  +R  FD I +R 
Sbjct: 620 VLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRK 679

Query: 110 -VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIH 166
              TW SMI    + G L E     ++  +  G++PD  T+  VL AC +   VD  K +
Sbjct: 680 ETITWTSMIVAMAQHG-LGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRY 738

Query: 167 CSVLK--LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSG 223
              ++   G    +   A ++ ++ R GL   A +    MPV  D+  W ++++      
Sbjct: 739 YEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRK 798

Query: 224 NAVEALDILDEMRLEGVSMDP------ITVASILPVCAR 256
           NA    D+ +    + +S+DP        +A++   C R
Sbjct: 799 NA----DLAELAAGKLLSIDPHNSGAYSALANVYSACGR 833


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 288/775 (37%), Positives = 439/775 (56%), Gaps = 26/775 (3%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            + ++ A ++ SG    ++  + LV+ +A  G L  ++  F ++  RN  T N +I   V+
Sbjct: 289  LDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVK 348

Query: 123  CGRLSEAVDCFYQFTLTSGLRPDFY----TFPPVLKACRN-------LVDGKKIHCSVLK 171
                 EAV  F       G R  F     TF  +L A          L+ G+++H  +L+
Sbjct: 349  QHCSEEAVGIFM------GTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILR 402

Query: 172  LGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
             G  +  + ++  L++MY + G  + A ++F  +  RD  SWN +IS   Q+G    A+ 
Sbjct: 403  TGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMM 462

Query: 231  ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
                MR   +S       S L  CA    + +G  +H   VK GL+ +  VSN L+ MY 
Sbjct: 463  NYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYG 522

Query: 291  KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH-GFFTTMQQAGIQPDLLTLV 349
              G    +  +F+ M E D+VSWNSI+     S+ P       F+ M ++G+ P+ +T V
Sbjct: 523  DCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFV 582

Query: 350  SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP- 408
            +L S ++ L+     + VH  +++ G  +ED  + NA++  YAK G ++S   +F  +  
Sbjct: 583  NLLSALSPLSVLELGKQVHAVVLKHG-AIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSG 641

Query: 409  VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
             +D +SWN++I+GY  NG   E ++   +M   N++  +  T+  +L A + V AL +G+
Sbjct: 642  RRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQM-LDCCTFSIVLNACASVAALERGM 700

Query: 469  KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
            ++HA  I++ L  DV V + L+DMY KCGRID A  +F  + + +   WN++IS +  HG
Sbjct: 701  EMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHG 760

Query: 529  QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
             G+KAL  F +M   G  PDH+TFVS+L+ACSH+GLV  G  YF MM E+ GI PH++HY
Sbjct: 761  LGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMM-EDHGILPHIEHY 819

Query: 589  GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN---MELGAVASDRLFE 645
             C++DL GRAG L     +I  MP++P+  IW  +L ACR   +   ++LG  AS  L E
Sbjct: 820  SCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLE 879

Query: 646  VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
            ++ +N   YVL SN YA  G+WE   + R+      +KK  G S + + + V  F  G+R
Sbjct: 880  LEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDR 939

Query: 706  THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
            +HP  ++IY++L  L  K+K+ GYVP   F L D+EE+ KE +L+ HSE+LA+AF +  S
Sbjct: 940  SHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRS 999

Query: 766  PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
                PI+I KNLRVCGDCH   ++ISQI  R+II+RDS RFHHF+DG CSCGDYW
Sbjct: 1000 SSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/596 (28%), Positives = 284/596 (47%), Gaps = 34/596 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +RLH  LV  G    +F S  LVN YA    L+ +R  FD +  RN  +W  ++S YV  
Sbjct: 76  ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135

Query: 124 GRLSEAVDCFYQFTLTSG--LRPDFYTFPPVLKACRN-----LVDGKKIHCSVLKLGFEW 176
           G   EA   F           RP  +TF  VL+AC++     L    ++H  V K  +  
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195

Query: 177 DVFVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL----- 229
           +  V  +L+ MY  C  GL   A+++FD  PVRD  +WNA++S Y + G  V        
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255

Query: 230 ----DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY--IVKHGLEFNLFVSN 283
               D   E+R    +   +  A+ L  C+      SG+L  ++  ++K G   +L+V +
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATSLSSCS------SGVLDQVFARVLKSGSSSDLYVGS 309

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L++ +A+ GM+  A  +F  + ER+ V+ N +I    + +    A G F   + + +  
Sbjct: 310 ALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV- 368

Query: 344 DLLTLVSLTSIVAQL----NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           +  T V L S VA+     +     R VHG I+R G     + + N +V+MYAK G I+ 
Sbjct: 369 NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDK 428

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  VF  L  +D +SWNT+I+   QNG    A+  + MM +   I+P+    +S L + +
Sbjct: 429 ASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQ-GCISPSNFAAISGLSSCA 487

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +  L  G ++H   +K  L  D  V+  LV MYG CG   ++  +F  +     V WN+
Sbjct: 488 SLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS 547

Query: 520 IISCH-GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           I+      H    +++  F  M+  G+ P+ +TFV+LL+A S   ++  G++   ++ + 
Sbjct: 548 IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKH 607

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             I+ +      M   + ++G +        +M  R DA  W +++     +G+++
Sbjct: 608 GAIEDNAVDNALM-SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 26/213 (12%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C  +  ++R   +HA  + S     V   + L++ Y+  G + ++   F+ +S
Sbjct: 683 FSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMS 742

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            +N ++WNSMIS Y R G   +A++ F +    +G  PD  TF  VL AC         H
Sbjct: 743 QKNEFSWNSMISGYARHGLGEKALEIFEEMQ-RNGACPDHVTFVSVLSACS--------H 793

Query: 167 CSVLKLGFEW-----DVFVAASLLHMYCRFGLANVARKLF------DDMPVR-DSGSWNA 214
             ++  G ++     D  +   + H  C   L   A KL       + MP++ ++  W  
Sbjct: 794 AGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRT 853

Query: 215 MISGYCQS--GNAVEALDILDEMRLEGVSMDPI 245
           ++    QS  G+ ++       M LE    +P+
Sbjct: 854 VLVACRQSKDGDRIDLGKEASRMLLELEPQNPV 886


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/673 (35%), Positives = 385/673 (57%), Gaps = 1/673 (0%)

Query: 148 TFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
           T   + +  + L    +++  +L       +     +   Y + G  +VA K F+ +   
Sbjct: 17  TLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFE 76

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +  SWN +++ + ++    + L +   M  EG  +D   +   +  C          L H
Sbjct: 77  NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFH 136

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
              +K  LE + +V+  L+N+Y + G +  A +VF+++  ++ V W  +I  +   ++  
Sbjct: 137 SLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEF 196

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
                F+ M+++G + D   +  L      +   +  ++ HG  +++ +   +  +  ++
Sbjct: 197 GVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSL 256

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           VDMY K G ++ A  +FE +  +DV+ W+ +I G+A+NG A E+I +F+ M   + + PN
Sbjct: 257 VDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQML-ADSVTPN 315

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T+ SI+ A S +G+L+QG  +H  +I+N +  DV   T  +DMY KCG I  A  +F 
Sbjct: 316 SVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFC 375

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           Q+P  +   W+ +I+  G+HG   +ALN F +M      P+ +TFVS+L+ACSHSG + E
Sbjct: 376 QIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEE 435

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G  +F  M  ++GI P  +HY CMVDL GRAG +  A +FI NMP  P AS WGALLGAC
Sbjct: 436 GWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGAC 495

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           RIH   EL    + +L  ++S+  G YV++SNIYA+VG WE V + R    ++G+ K  G
Sbjct: 496 RIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVG 555

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           ++SIE+  K+ +F + +R   K  +I     +L  +M+ LGYVPD  FVL DV+++ K+ 
Sbjct: 556 FTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQE 615

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           +L  HSE+LAI FG+++S    PI+I KN+RVCGDCH  +KFIS IT R+II+RD  RFH
Sbjct: 616 VLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFH 675

Query: 808 HFKDGICSCGDYW 820
           H +DG+CSCGDYW
Sbjct: 676 HVQDGVCSCGDYW 688



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 258/496 (52%), Gaps = 9/496 (1%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
            LF+    L    +L+A ++V+   +++     +   Y  LG L  +   F+HI++ N++
Sbjct: 20  SLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLH 79

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVDGKKI-HCS 168
           +WN++++ + +     + +  F +  L  G   D +     +KAC   +L  G K+ H  
Sbjct: 80  SWNTILASHSKNKCFYDVLQLFKRM-LKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSL 138

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            +KL  E D +VA +L+++Y   G    A K+F+++P+++S  W  MI G+         
Sbjct: 139 AIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGV 198

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH-LYIVKHGLEFNLFVSNNLIN 287
            ++   MR  G  +DP  V  ++  C        G   H L I K+ ++ N F+  +L++
Sbjct: 199 FELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVD 258

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MY K G +  AL++F+++  RDVV W++IIA + ++   + +   F  M    + P+ +T
Sbjct: 259 MYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVT 318

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             S+    + L   +  RSVHG+++R G  + DV    + +DMYAK G I +A  VF  +
Sbjct: 319 FASIVLACSSLGSLKQGRSVHGYMIRNGVEL-DVKNYTSFIDMYAKCGCIVTAYRVFCQI 377

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P K+V SW+T+I G+  +GL +EA+ +F  M   N++ PN  T+VS+L A SH G + +G
Sbjct: 378 PEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL-PNSVTFVSVLSACSHSGRIEEG 436

Query: 468 IKIHARVIKNCLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
                 + ++     V     C+VD+ G+ G+ID+A+S    +P    +  W A++    
Sbjct: 437 WSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACR 496

Query: 526 IHGQGDKALNFFRQML 541
           IH + + A    +++L
Sbjct: 497 IHRRAELAEEVAKKLL 512



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 8/220 (3%)

Query: 51  DDLFQSCTKLH---HVKRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           + L Q+C  ++     K  H L +    I +  F  T LV+ Y   G L F+   F+ IS
Sbjct: 218 EGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEIS 277

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGK 163
           YR+V  W+++I+ + R GR  E++  F Q  L   + P+  TF  ++ AC    +L  G+
Sbjct: 278 YRDVVVWSAIIAGFARNGRALESISMFRQM-LADSVTPNSVTFASIVLACSSLGSLKQGR 336

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            +H  +++ G E DV    S + MY + G    A ++F  +P ++  SW+ MI+G+   G
Sbjct: 337 SVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHG 396

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
              EAL++  EMR      + +T  S+L  C+ S  I  G
Sbjct: 397 LCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG 436


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/555 (41%), Positives = 349/555 (62%), Gaps = 2/555 (0%)

Query: 266  IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
            +H     HG+  NL V+N L+  Y+ +  +  A  +FD M  RD VSW+ ++  + +  D
Sbjct: 757  VHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 816

Query: 326  PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
             +   G F  + + G +PD  TL  +      L + +  R +H  + + G  + D  +  
Sbjct: 817  YMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL-DHFVCA 875

Query: 386  AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            A+VDMY K   I  A  +F+ +  +D+++W  +I GYA+ G A+E++ +F  M E   + 
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMRE-EGVV 934

Query: 446  PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
            P++   V+++ A + +GA+ +   I   + +     DV + T ++DM+ KCG ++ A  +
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 506  FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
            F ++   + + W+A+I+ +G HGQG KAL+ F  ML  G+ P+ IT VSLL ACSH+GLV
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054

Query: 566  SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
             EG R+F  M E++ ++  +KHY C+VDL GRAG L  A   I +M    D  +WGA LG
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114

Query: 626  ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
            ACR H ++ L   A+  L E+  +N G+Y+L+SNIYAN G+WE V ++R L   R LKK 
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKI 1174

Query: 686  PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
            PGW+ IEV+NK   F  G+ THP+ ++IY+ L++L  K++ +GYVPD +FVL DV+E+ K
Sbjct: 1175 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 1234

Query: 746  EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
              IL +HSE+LAIAFG+I++P  +PI+I KNLRVCGDCH + K +S IT R IIVRD+NR
Sbjct: 1235 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 1294

Query: 806  FHHFKDGICSCGDYW 820
            FHHFK+G CSCGDYW
Sbjct: 1295 FHHFKEGACSCGDYW 1309



 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/513 (40%), Positives = 319/513 (62%), Gaps = 2/513 (0%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H     HG+  N+ V+N LI  Y+ +  +  A  +FD M  RD VSW+ ++  + +  D
Sbjct: 81  VHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 140

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
            I   G F  + + G +PD  TL  +      L + +  R +H  + + G  + D  +  
Sbjct: 141 YINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL-DHFVCA 199

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A+VDMY K   I  A  +F+ +  +D+++W  +I GYA+ G A+E++ +F+ M E   + 
Sbjct: 200 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMRE-EGVV 258

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P++   V+++ A + +GA+ +   I   + +     DV + T ++DMY KCG ++ A  +
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++   + + W+A+I+ +G HGQG KAL+ F  ML  G+ PD IT  SLL ACSH+GLV
Sbjct: 319 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLV 378

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG R+F  M E++ ++  +KHY C+VDL GRAG L  A   I++M +  D  +WGA LG
Sbjct: 379 EEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLG 438

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           ACR H ++ L   A+  L E+ S+N G+YVL+SNIYAN G+WE V ++R L   R LKKT
Sbjct: 439 ACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKT 498

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PGW+ IEV+NK   F  G+ THP+ ++IY+ L++L+ K++ +GYVPD +FVL DV+E+ K
Sbjct: 499 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELK 558

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
             IL +HSE+LAIAFG+I++P  +PI+I KNLR
Sbjct: 559 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 204/421 (48%), Gaps = 11/421 (2%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           +C  L  V+++HA   V G ++ +  + KL+ FY+    L  +   FD +  R+  +W+ 
Sbjct: 71  NCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSV 130

Query: 116 MISVYVRCGRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           M+  + + G   + ++CF  F   +  G RPD YT P V++ACR+L +   G+ IH  V 
Sbjct: 131 MVGGFAKVG---DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY 187

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G + D FV A+L+ MY +      AR LFD M  RD  +W  MI GY + G A E+L 
Sbjct: 188 KFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLV 247

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + ++MR EGV  D + + +++  CA+   +    +I  YI +   + ++ +   +I+MYA
Sbjct: 248 LFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYA 307

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  A  +FD+M E++V+SW+++IAAY        A   F  M  +G+ PD +TL S
Sbjct: 308 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLAS 367

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV- 409
           L    +              +        DV     VVD+  + G ++ A  + + + + 
Sbjct: 368 LLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIE 427

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD   W   +     +     A +    + E    NP  G YV +   Y++ G      K
Sbjct: 428 KDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNP--GHYVLLSNIYANAGRWEDVAK 485

Query: 470 I 470
           I
Sbjct: 486 I 486



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 202/419 (48%), Gaps = 11/419 (2%)

Query: 58   TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
            T L  V+++H    V G ++ +  + KLV FY+    L  +   FD +  R+  +W+ M+
Sbjct: 749  TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808

Query: 118  SVYVRCGRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
              + + G   + ++CF  F   +  G RPD YT P V++ACR+L +   G+ IH  V K 
Sbjct: 809  GGFAKVG---DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 865

Query: 173  GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
            G + D FV A+L+ MY +      AR LFD M  RD  +W  MI GY + GNA E+L + 
Sbjct: 866  GLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLF 925

Query: 233  DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            D+MR EGV  D + + +++  CA+   +     I  YI +   + ++ +   +I+M+AK 
Sbjct: 926  DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 985

Query: 293  GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
            G +  A  +FD+M E++V+SW+++IAAY        A   F  M ++GI P+ +TLVSL 
Sbjct: 986  GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 1045

Query: 353  SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KD 411
               +              +        DV     VVD+  + G ++ A  +   +   KD
Sbjct: 1046 YACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKD 1105

Query: 412  VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
               W   +     +     A +    + E    NP  G Y+ +   Y++ G      KI
Sbjct: 1106 EGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNP--GHYILLSNIYANAGRWEDVAKI 1162



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 6/184 (3%)

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L Q  ++H +   + +  ++ VA  LV  Y     +DDA  LF  +    SV W+ ++  
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
               G        FR+++  G RPD+ T   ++ AC     +  G R  H +  +FG+  
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG-RLIHHIVYKFGLD- 868

Query: 584 HLKHYGC--MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            L H+ C  +VD++G+   +  A      M  R D   W  ++G     GN     V  D
Sbjct: 869 -LDHFVCAALVDMYGKCREIEDARFLFDKMXER-DLVTWTVMIGGYAECGNANESLVLFD 926

Query: 642 RLFE 645
           ++ E
Sbjct: 927 KMRE 930



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 11/187 (5%)

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             +NP    Y+S L    ++  +RQ   +HA+   + +  ++ VA  L+  Y     +DD
Sbjct: 58  QRLNPK--FYISALVNCRNLTQVRQ---VHAQASVHGMLENIVVANKLIYFYSYYRALDD 112

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  LF  +    SV W+ ++      G        FR+++  G RPD+ T   ++ AC  
Sbjct: 113 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD 172

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGC--MVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
              +  G R  H +  +FG+   L H+ C  +VD++ +   +  A      M  R D   
Sbjct: 173 LKNLQMG-RLIHHIVYKFGLD--LDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVT 228

Query: 620 WGALLGA 626
           W  ++G 
Sbjct: 229 WTVMIGG 235


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/676 (36%), Positives = 387/676 (57%), Gaps = 34/676 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM- 235
           ++F   +LL       L     +LF  MP RD+ S+NA+I+G+  +G+   ++ +   + 
Sbjct: 78  NLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALL 137

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           R E V    IT+++++ V +   +   G  +H  +++ G     FV + L++MYAK G++
Sbjct: 138 REESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 296 RHALRVFDQ-------------------------------MMERDVVSWNSIIAAYEQSN 324
           R A RVF +                               M++RD ++W +++    Q+ 
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
             + A   F  M+  G+  D  T  S+ +    L      + +H +I R  W+ ++V +G
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRT-WYEDNVFVG 316

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           +A+VDMY+K   I  A AVF  +  +++ISW  +I GY QN  + EA+  F  M + + I
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEM-QMDGI 375

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P+  T  S++ + +++ +L +G + H   + + L   + V+  LV +YGKCG I+DA  
Sbjct: 376 KPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHR 435

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           LF ++     V W A+++ +   G+  + ++ F +ML  G++PD +TF+ +L+ACS +GL
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGL 495

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V +G  YF  MQ++  I P   HY CM+DL+ R+G    A  FI+ MP  PDA  W  LL
Sbjct: 496 VEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            +CR+ GNME+G  A++ L E D +N   YVL+ +++A  G+W  V  +R   RDR +KK
Sbjct: 556 SSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKK 615

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S I+  NKV IF   +++HP   +IY++L  L +KM   GY PD S VL DV + +
Sbjct: 616 EPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADAD 675

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K H+++ HSE+LAIAFG+I  P + PI+I KNLRVC DCHN TKFIS+IT R+I+VRD+ 
Sbjct: 676 KVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAV 735

Query: 805 RFHHFKDGICSCGDYW 820
           RFH F DG CSCGD+W
Sbjct: 736 RFHKFSDGTCSCGDFW 751



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 220/466 (47%), Gaps = 44/466 (9%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F  +  R+  ++N++I+ +   G  + +V  +        +RP   T   ++     L D
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 162 ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV------------ 206
              G  +HC VL+LGF    FV + L+ MY + GL   AR++F +M              
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 207 -------------------RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 247
                              RDS +W  M++G  Q+G  +EALD+   MR EGV +D  T 
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
            SIL  C        G  IH YI +   E N+FV + L++MY+K   +R A  VF +M  
Sbjct: 282 GSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R+++SW ++I  Y Q+     A   F+ MQ  GI+PD  TL S+ S  A L         
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQF 401

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H   +  G  M  + + NA+V +Y K G I  A  +F+ +   D +SW  L+TGYAQ G 
Sbjct: 402 HCLALVSG-LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA- 486
           A E I++F+ M   N + P+  T++ +L A S  G + +G      + K+    D+    
Sbjct: 461 AKETIDLFEKM-LVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKD---HDIVPID 516

Query: 487 ---TCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHG 528
              TC++D+Y + GR  +A     Q+P S  +  W  ++S   + G
Sbjct: 517 DHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 201/423 (47%), Gaps = 68/423 (16%)

Query: 266 IHLYIVKHGLEFN-LFVSNNLINMYAKFGMMRHALRVFDQ-------------------- 304
           +H  I+K  L+    F+ N+L+  YAK G +  A RVFD+                    
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 305 -----------MMERDVVSWNSIIAAYEQSNDPITAHGFFTT-MQQAGIQPDLLTLVSLT 352
                      M ERD VS+N++I  +  +  P  +   +   +++  ++P  +TL ++ 
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-- 410
            + + L+D     SVH  ++R G F     +G+ +VDMYAK+G+I  A  VF+ +  K  
Sbjct: 154 MVASALSDRALGHSVHCQVLRLG-FGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 411 -----------------------------DVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
                                        D I+W T++TG  QNGL  EA++VF+ M   
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRM-RA 271

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             +  +Q T+ SIL A   + A  +G +IHA + +     +VFV + LVDMY KC  I  
Sbjct: 272 EGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRL 331

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A ++F ++   + + W A+I  +G +   ++A+  F +M  +G++PD  T  S++++C++
Sbjct: 332 AEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCAN 391

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
              + EG + FH +    G+  ++     +V L+G+ G +  AH     M      S W 
Sbjct: 392 LASLEEGAQ-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WT 449

Query: 622 ALL 624
           AL+
Sbjct: 450 ALV 452



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 187/430 (43%), Gaps = 40/430 (9%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC--------------- 123
            F  + LV+ YA +G +  +R  F  +  + V  +N++I+  +RC               
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD 240

Query: 124 ----------------GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKK 164
                           G   EA+D F +     G+  D YTF  +L AC  L    +GK+
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMR-AEGVGIDQYTFGSILTACGALAASEEGKQ 299

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  + +  +E +VFV ++L+ MY +     +A  +F  M  R+  SW AMI GY Q+  
Sbjct: 300 IHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNAC 359

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           + EA+    EM+++G+  D  T+ S++  CA   ++  G   H   +  GL   + VSN 
Sbjct: 360 SEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNA 419

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+ +Y K G +  A R+FD+M   D VSW +++  Y Q          F  M   G++PD
Sbjct: 420 LVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPD 479

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T + + S  ++             + +    +        ++D+Y++ G    A    
Sbjct: 480 GVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFI 539

Query: 405 EGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA----YS 459
           + +P   D   W TL++     G         + + E +  NP     +  + A    ++
Sbjct: 540 KQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWT 599

Query: 460 HVGALRQGIK 469
            V  LR+G++
Sbjct: 600 EVAHLRRGMR 609


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/725 (36%), Positives = 393/725 (54%), Gaps = 86/725 (11%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDE 234
           DV    +L+  Y   G   +AR++F++ P+  RD+  +NAMI+GY    +   A+++   
Sbjct: 78  DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137

Query: 235 MRLEGVSMDPITVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           MR      D  T AS+L        D    G + H  +VK G+E    V N L+++Y K 
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCGQM-HGTVVKFGIEIFPAVLNALLSVYVKC 196

Query: 293 GM---------MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA-------------- 329
                      M  A ++FD+M +R+   W ++I  Y ++ D   A              
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA 256

Query: 330 ----------HGFFT-------TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
                     HG F         M+  G+Q D  T  S+ S  A        + VH +I+
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316

Query: 373 R------RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY---- 422
           +      R + +    +GN ++ +Y K G ++ A  +F  +PVKD+I+WNTL++GY    
Sbjct: 317 KNELNPDRDFLLS---VGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAG 373

Query: 423 ---------------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
                                      AQNG   +A+++F  M+  +   PN   +   +
Sbjct: 374 RMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMK-LDGYEPNDYAFAGAI 432

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A S +GAL  G ++HA+++       + V   ++ MY +CG ++ A ++F  +P    V
Sbjct: 433 TACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPV 492

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN++I+  G HG G KA+  + QML EG+ PD  TF+++L+ACSH+GLV EG RYF+ M
Sbjct: 493 SWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSM 552

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
            E +GI P   HY  M+DLF RAG    A N I +MP    A IW ALL  CR HGNM+L
Sbjct: 553 LENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDL 612

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G  A+++LF++  ++ G YVL+SN+YA++G+W  V   R L RDRG+KK P  S  EV N
Sbjct: 613 GIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVEN 672

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           KV +F   +  HP+   IY+ L  L  +MK +GY+PD  +VL D+E + KE+ L++HSE+
Sbjct: 673 KVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEK 732

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LA+AFG++  P  + +++FKNLR+CGDCHN  KF+S++  REI+VRD  RFHHFK+G CS
Sbjct: 733 LAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECS 792

Query: 816 CGDYW 820
           C +YW
Sbjct: 793 CRNYW 797



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 273/591 (46%), Gaps = 96/591 (16%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           V + T L+  Y+ LG+L  +R  F+   +  R+   +N+MI+ Y        A++ F   
Sbjct: 79  VIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAM 138

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVLKLGFEWDVFVAASLLHMYCRFG 192
              +  +PD +TF  VL A   +   ++    +H +V+K G E    V  +LL +Y +  
Sbjct: 139 RW-ANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCA 197

Query: 193 LANV---------ARKLFDDMPVRDSG-------------------------------SW 212
            + +         ARKLFD+MP R+                                 +W
Sbjct: 198 SSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAW 257

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NAMISGY   G   +AL +  +MRL GV +D  T  S++  CA     L G  +H YI+K
Sbjct: 258 NAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILK 317

Query: 273 HGL----EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           + L    +F L V N LI +Y K+G +  A ++F +M  +D+++WN++++ Y  +     
Sbjct: 318 NELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEE 377

Query: 329 AHGFFTTM---------------------QQA----------GIQPDLLTLVSLTSIVAQ 357
           A  FF  M                     +QA          G +P+        +  + 
Sbjct: 378 AKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSV 437

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L    N R +H  I+  G     + +GNA++ MYA+ GI+ +A  +F  +P  D +SWN+
Sbjct: 438 LGALENGRQLHAQIVHLG-HDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNS 496

Query: 418 LITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           +I    Q+G   +AIE++ QM++E   I P++ T++++L A SH G + +G +    +++
Sbjct: 497 MIAALGQHGHGVKAIELYEQMLKEG--ILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE 554

Query: 477 N---CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDK 532
           N       D +    ++D++ + G+  DA ++   +P  +  P W A+++    HG  D 
Sbjct: 555 NYGIAPGEDHYAR--MIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDL 612

Query: 533 ALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +    ++    + P H  T+V L    +  G  ++  R   +M++  G+K
Sbjct: 613 GIEAAEKLFK--LIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDR-GVK 660



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 188/475 (39%), Gaps = 111/475 (23%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME------------------ 307
           +H +++  G +    + N LI++Y K     +A ++FD++ +                  
Sbjct: 35  VHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGN 94

Query: 308 ---------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-L 351
                          RD V +N++I  Y   ND  +A   F  M+ A  QPD  T  S L
Sbjct: 95  LKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVL 154

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG---------IINSACA 402
           ++      D R    +HG +++ G  +   ++ NA++ +Y K           ++ SA  
Sbjct: 155 SASTLIFYDERQCGQMHGTVVKFGIEIFPAVL-NALLSVYVKCASSPLVSSSSLMASARK 213

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN--------------- 447
           +F+ +P ++   W TLITGY +NG  + A E+   M E   I  N               
Sbjct: 214 LFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDA 273

Query: 448 ---------------QGTYVSILPAYSHVGALRQGIKIHARVIKNCLC----FDVFVATC 488
                          + TY S++ A +  G    G ++HA ++KN L     F + V   
Sbjct: 274 LTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNT 333

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH------------------------ 524
           L+ +Y K G++D A  +FY++P    + WN ++S +                        
Sbjct: 334 LITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTW 393

Query: 525 -------GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
                    +G G++AL  F QM  +G  P+   F   +TACS  G +  G R  H    
Sbjct: 394 TVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENG-RQLHAQIV 452

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             G    L     M+ ++ R G +  A      MP   D   W +++ A   HG+
Sbjct: 453 HLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF-VDPVSWNSMIAALGQHGH 506



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K + +   L++ Y N G +  ++  F  +  +N+ TW  MIS   + G   +A+  F Q
Sbjct: 356 VKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQ 415

Query: 136 FTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             L  G  P+ Y F   + AC     L +G+++H  ++ LG +  + V  +++ MY R G
Sbjct: 416 MKL-DGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCG 474

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           +   AR +F  MP  D  SWN+MI+   Q G+ V+A+++ ++M  EG+  D  T  ++L 
Sbjct: 475 IVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLS 534

Query: 253 VCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            C+ +  +  G    +  +  +G+         +I+++ + G    A  V D M  E   
Sbjct: 535 ACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARA 594

Query: 311 VSWNSIIAA 319
             W +++A 
Sbjct: 595 PIWEALLAG 603



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 52/315 (16%)

Query: 370 FIMRRGWFME----DVIIGNAVVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYA 423
           F+  R  F E    DVI    ++  Y+ LG +  A  +F   P+  +D + +N +ITGY+
Sbjct: 64  FVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYS 123

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS------------HVGALRQGIKIH 471
                  AIE+F+ M   N   P+  T+ S+L A +            H   ++ GI+I 
Sbjct: 124 HMNDGHSAIELFRAMRWAN-FQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIF 182

Query: 472 ARVIKNCLCFDV-----------------------------FVATCLVDMYGKCGRIDDA 502
             V+   L   V                             F+ T L+  Y + G +  A
Sbjct: 183 PAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGA 242

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +   +     + WNA+IS +  HG  + AL  FR+M   GV+ D  T+ S+++AC+  
Sbjct: 243 REILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADG 302

Query: 563 GLVSEG-QRYFHMMQEEFGI-KPHLKHYG-CMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           G    G Q + ++++ E    +  L   G  ++ L+ + G +  A      MPV+ D   
Sbjct: 303 GFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIIT 361

Query: 620 WGALLGACRIHGNME 634
           W  LL      G ME
Sbjct: 362 WNTLLSGYVNAGRME 376



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 12/200 (6%)

Query: 44  ESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  +  F     +C+    L + ++LHA +V  G   T+     ++  YA  G +  +R 
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAART 481

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            F  + + +  +WNSMI+   + G   +A++ + Q  L  G+ PD  TF  VL AC +  
Sbjct: 482 MFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQM-LKEGILPDRRTFLTVLSACSHAG 540

Query: 159 -LVDGKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAM 215
            + +G +   S+L+  G        A ++ ++CR G  + A+ + D MP       W A+
Sbjct: 541 LVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEAL 600

Query: 216 ISGYCQSGN---AVEALDIL 232
           ++G    GN    +EA + L
Sbjct: 601 LAGCRTHGNMDLGIEAAEKL 620


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/780 (34%), Positives = 432/780 (55%), Gaps = 21/780 (2%)

Query: 47  EIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E       +SC+ L   +H  R  AL+  SG        + L++FY+  G    +   F+
Sbjct: 116 EFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFE 175

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVD 161
           +++  ++ +W  M+S +V  G  S+A+  +++  + +G+ P+ +TF  +L A     L  
Sbjct: 176 YMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM-IQTGVAPNEFTFVKLLAASSFLGLNY 234

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK +H  ++    E ++ +  +L+ MYC+      A K+       D   W A+ISG+ Q
Sbjct: 235 GKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQ 294

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           S    EA+    EM   GV  +  T + IL  C+    +  G  IH  +V  GLE ++ V
Sbjct: 295 SLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSV 354

Query: 282 SNNLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            N+L++MY K   M+  A+R F  +   +V+SW S+IA + +      +   F  MQ  G
Sbjct: 355 GNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVG 414

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++P+  TL ++      +     +R +HG+I++      DV++GNA+VD YA LG+++ A
Sbjct: 415 VRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNN-ADNDVVVGNALVDAYAGLGMVDDA 473

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             V   +  +DVI++ +L T   Q G    A+ +   M + +++  +  +  S L A + 
Sbjct: 474 WHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNK-DDVRMDGFSLASFLSAAAG 532

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +  +  G ++H   +K+ L   + V+  LVD+YGKCG I DA   F ++    +V WN +
Sbjct: 533 IPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGL 592

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I     +G    AL+ F  M   GV PD IT + +L ACSH GLV  G  YF  M+E+ G
Sbjct: 593 IFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHG 652

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I+P L HY C+VDL GRAG L  A N I+ MP +PDA I+  LLGAC++HGN+ LG   +
Sbjct: 653 IRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMA 712

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
            +  E+D  +  +YVL++N+Y + G+ E  ++ R + R+RG++K PG S +E  N V +F
Sbjct: 713 RQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLF 772

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G+ +HP+  KI++++ +L A+ ++ G               ++   L  HSE+LA+AF
Sbjct: 773 TAGDTSHPQIGKIHEKIESLIAQFRNQGIWY------------QENRALAHHSEKLAVAF 820

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+IS+PPK+PI+I KN+R+C DCH++   ++++ +REIIVRD NRFH FK G CSC  YW
Sbjct: 821 GLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 289/595 (48%), Gaps = 18/595 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H+ ++  G  + +F S  L++ Y     ++ +R  FD +  R+V +W  ++S Y + G 
Sbjct: 37  IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
             EA++ F    L SG  P+ +T    L++C   R    G +    V K GF+ +  + +
Sbjct: 97  HEEALELFDSM-LISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGS 155

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+  Y + G    A ++F+ M   D  SW  M+S + ++G+  +AL +   M   GV+ 
Sbjct: 156 ALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAP 215

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           +  T   +L   +    +  G L+H +++   +E NL +   L++MY K   +  A++V 
Sbjct: 216 NEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVS 274

Query: 303 DQMMERDVVSWNSIIAAYEQS---NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
              +E DV  W +II+ + QS    + ITA   F  M+ +G+ P+  T   + +  + + 
Sbjct: 275 KLTLEYDVFLWTAIISGFTQSLKFREAITA---FHEMETSGVVPNNFTYSGILNACSSIL 331

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG-IINSACAVFEGLPVKDVISWNTL 418
                + +H  ++  G    DV +GN++VDMY K   +I  A   F G+   +VISW +L
Sbjct: 332 ALDLGKQIHSRVVMAG-LENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSL 390

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G++++GL  E+I+VF  M+    + PN  T  +IL A   + +L Q  K+H  +IKN 
Sbjct: 391 IAGFSEHGLEEESIKVFGAMQGVG-VRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNN 449

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              DV V   LVD Y   G +DDA  +   +     + + ++ +     G  + ALN   
Sbjct: 450 ADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIIT 509

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M  + VR D  +  S L+A +   ++  G++  H    + G+   +     +VDL+G+ 
Sbjct: 510 HMNKDDVRMDGFSLASFLSAAAGIPIMETGKQ-LHCYSVKSGLGSWISVSNGLVDLYGKC 568

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVASDRLFEVDSENV 651
           G +  AH     +   PDA  W  L+     +G++   L A    RL  V+ + +
Sbjct: 569 GCIHDAHRSFLEI-TEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQI 622



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/406 (33%), Positives = 217/406 (53%), Gaps = 8/406 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAM 215
           R++ DG  IH  ++K+GF+ D+F++ +LL +Y + FG+A  AR+LFD+MP RD  SW  +
Sbjct: 29  RSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAE-ARQLFDEMPCRDVASWTML 87

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           +S Y + GN  EAL++ D M + G   +  T+++ L  C+       G      + K G 
Sbjct: 88  MSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGF 147

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           + N  + + LI+ Y+K G  + A RVF+ M   D+VSW  +++++ ++     A   +  
Sbjct: 148 DSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHR 207

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKL 394
           M Q G+ P+  T V L +  + L      + VH  +M   W +E ++++  A+VDMY K 
Sbjct: 208 MIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMM--WRIELNLVLKTALVDMYCKC 264

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
             I  A  V +     DV  W  +I+G+ Q+    EAI  F  ME    + PN  TY  I
Sbjct: 265 QSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVV-PNNFTYSGI 323

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR-IDDAMSLFYQVPRSS 513
           L A S + AL  G +IH+RV+   L  DV V   LVDMY KC   I+DA+  F  +   +
Sbjct: 324 LNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPN 383

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
            + W ++I+    HG  ++++  F  M   GVRP+  T  ++L AC
Sbjct: 384 VISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 195/384 (50%), Gaps = 9/384 (2%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           I+  C  S ++  G+ IH  I+K G + ++F+SNNL+++Y K   +  A ++FD+M  RD
Sbjct: 22  IVSFC-NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRD 80

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V SW  +++AY +  +   A   F +M  +G  P+  TL +     + L +  +      
Sbjct: 81  VASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQA 140

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            + + G F  + ++G+A++D Y+K G    A  VFE +   D++SW  +++ + + G  S
Sbjct: 141 LVTKSG-FDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWS 199

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           +A++++  M +   + PN+ T+V +L A S +G L  G  +HA ++   +  ++ + T L
Sbjct: 200 QALQLYHRMIQTG-VAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTAL 257

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KC  I+DA+ +           W AIIS      +  +A+  F +M   GV P++
Sbjct: 258 VDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNN 317

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
            T+  +L ACS S L  +  +  H      G++  +     +VD++ +  +  M  + ++
Sbjct: 318 FTYSGILNACS-SILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSN--MIEDAVR 374

Query: 610 NMP--VRPDASIWGALLGACRIHG 631
                  P+   W +L+     HG
Sbjct: 375 AFRGIASPNVISWTSLIAGFSEHG 398


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/773 (34%), Positives = 400/773 (51%), Gaps = 115/773 (14%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP---------------- 205
            + +H  +L  GF+ + F+   L+++YC+      ARKLFD +P                
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 206 -----------------VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
                            +RD+ S+NAMI+ Y    +   AL++  +M+  G   DP T +
Sbjct: 84  SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143

Query: 249 SILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA---------KFGMMRHA 298
           S+L   +  +D      ++H  ++K G      V+N L++ Y             +M  A
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203

Query: 299 LRVFDQMMERDVV--SWNSIIAAYEQSNDPITAHGF------------------------ 332
            +VFD+  +  +   SW ++IA Y +++D + A                           
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGL 263

Query: 333 -------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN----SRSVHGFIMR-------- 373
                  F  M   GIQ D  T  SL S     N+        R VHG+I+R        
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHH 323

Query: 374 ----------------------RGWF----MEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
                                 R  F    + D+I  NAV+  Y     I  A ++F  +
Sbjct: 324 FVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEM 383

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P ++V++W  +I+G AQNG   E +++F  M+    + P    +   + A S +G+L  G
Sbjct: 384 PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKS-EGLEPCDYAFAGAITACSVLGSLDNG 442

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            +IH++VI+      +     L+ MY +CG ++ A S+F  +P   SV WNA+I+    H
Sbjct: 443 QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQH 502

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G KA+  F QM+ E + PD ITF+++LTAC+H+GL+ EG+ YF  M   +GI P   H
Sbjct: 503 GHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDH 562

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y  ++DL  RAG    A + I++MP    A IW ALL  CRIHGNMELG  A+DRL E+ 
Sbjct: 563 YARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELI 622

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
               G Y+++SN+YA +G+W+ V  VR L R+RG+KK PG S +EV N V +F   +  H
Sbjct: 623 PGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARH 682

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ + +Y  L+ L  +MK LGYVPD  FVL D+E + KEH L++HSE+LA+ +GI+  P 
Sbjct: 683 PEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPL 742

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + I++FKNLR+CGDCHN  K+IS++ EREI+VRD  RFHHFK+G CSCG+YW
Sbjct: 743 GATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 176/677 (25%), Positives = 291/677 (42%), Gaps = 148/677 (21%)

Query: 48  IDFDDL-FQSCTKLHHV-------KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR 99
           +D  DL ++  T+L+HV       + +HA ++ SG     F   +L+N Y    +++++R
Sbjct: 1   MDVRDLAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYAR 60

Query: 100 HTFDHI---------------------------------SYRNVYTWNSMISVYVRCGRL 126
             FD I                                 + R+  ++N+MI+ Y      
Sbjct: 61  KLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDG 120

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVLKLGFEWDVFVAA 182
             A++ F Q     G  PD +TF  VL A   + D ++    +HC V+KLG      V  
Sbjct: 121 HAALNLFVQMK-RYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTN 179

Query: 183 SLLHMYC---------RFGLANVARKLFDDMP----------------VRDSG------- 210
           +LL  Y             L   ARK+FD+ P                VR+         
Sbjct: 180 ALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAAREL 239

Query: 211 ----------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
                     +WNAMISGY + G   EA D    M   G+  D  T  S++  C   +  
Sbjct: 240 LDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEK 299

Query: 261 LS----GLLIHLYIVKHGLE----FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           +     G  +H YI++  +E    F L V+N LI  Y K+  M  A RVFD+M  RD++S
Sbjct: 300 MGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIIS 359

Query: 313 WNSIIAAY------EQSN------------------DPITAHGF-------FTTMQQAGI 341
           WN++++ Y      E++N                    +  +GF       F  M+  G+
Sbjct: 360 WNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGL 419

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P         +  + L    N + +H  ++R G     +  GNA++ MY++ G++ SA 
Sbjct: 420 EPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLG-HDSGLSAGNALITMYSRCGVVESAE 478

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSH 460
           +VF  +P  D +SWN +I   AQ+G   +AIE+F QMM+E  +I P++ T+++IL A +H
Sbjct: 479 SVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKE--DILPDRITFLTILTACNH 536

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATC------LVDMYGKCGRIDDAMSLFYQVPRSSS 514
            G +++G     R   + +C    +         L+D+  + G    A S+   +P  + 
Sbjct: 537 AGLIKEG-----RHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAG 591

Query: 515 VP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            P W A+++   IHG  +  +    ++L E +     T++ L    +  G   E  R   
Sbjct: 592 APIWEALLAGCRIHGNMELGIQAADRLL-ELIPGQDGTYIILSNMYAALGQWDEVARVRL 650

Query: 574 MMQEEFGIKPHLKHYGC 590
           +M+E  G+K   K  GC
Sbjct: 651 LMRER-GVK---KEPGC 663


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/715 (37%), Positives = 385/715 (53%), Gaps = 75/715 (10%)

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            A SL+  Y   G    +   FD +PV  RD+   NAMIS + ++  A  A+ +   +  
Sbjct: 91  AATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLA 150

Query: 238 EGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFN--LFVSNNLINMYAKF- 292
              S+ P   +  S+L    +  ++       L+   H L     L VSN LI +Y K  
Sbjct: 151 SDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCD 210

Query: 293 --GMMRHALRVFDQMMERDVVSW-------------------------------NSIIAA 319
             G+ R A +V D+M E+D ++W                               N++I+ 
Sbjct: 211 APGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISG 270

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG-FIMRRGWFM 378
           Y QS     A   F  M    I PD  T  SL S  A      + +SVHG FI  +  F+
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330

Query: 379 EDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT------------------- 417
            +    + NA+V +Y+K G I  A  +F+ + +KDV+SWNT                   
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390

Query: 418 ------------LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
                       +++GY   GLA +A+++F  M    ++ P   TY   + A   +GAL+
Sbjct: 391 EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRS-EDVKPCDYTYAGAVAACGELGALK 449

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G ++HA +++            L+ MY +CG + DA  +F  +P   SV WNA+IS  G
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG G +AL  F QM+ +G+ PD I+F+++LTAC+H+GLV +G +YF  M+ +FGI P  
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
            HY  ++DL GRAG +G A + I+ MP  P  +IW A+L  CRI+G+MELGA A+D+LF+
Sbjct: 570 DHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFK 629

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +  E+ G Y+L+SN Y+  G+W     VR L RDRG+KK PG S IEV NKV +F  G+ 
Sbjct: 630 MVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDT 689

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
            HP   ++Y  L  + AKM+ LGYVPD  F LQD+   EKE++L +HSERLA++FG++  
Sbjct: 690 KHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKL 749

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P  + + + KNL++CGDCH    F+S+   REI+VRD  RFHHFKDG CSCG+YW
Sbjct: 750 PAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 265/593 (44%), Gaps = 94/593 (15%)

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           ++T LV+ YA  G L  S   FD +  + R+    N+MIS + R    + AV  F     
Sbjct: 91  AATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLA 150

Query: 139 TS-GLRPDFYTFPPVLKACRNLVD-----GKKIHCSVLKLGFEWDVFVAASLLHMYCRF- 191
           +   LRPD Y+F  +L A   + D       ++HC+V KLG    + V+ +L+ +Y +  
Sbjct: 151 SDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCD 210

Query: 192 --GLANVARKLFDDMPVRDSGSW-------------------------------NAMISG 218
             G+   ARK+ D+MP +D  +W                               NAMISG
Sbjct: 211 APGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISG 270

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF- 277
           Y QSG   EA ++   M  + +  D  T  S+L  CA +   L G  +H   ++   +F 
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330

Query: 278 ---NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA----- 329
               L V+N L+ +Y+K G +  A ++FD M  +DVVSWN+I++ Y +S     A     
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390

Query: 330 ------------------HG--------FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
                             HG         F  M+   ++P   T     +   +L   ++
Sbjct: 391 EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKH 450

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + +H  +++ G F      GNA++ MYA+ G +  A  VF  +P  D +SWN +I+   
Sbjct: 451 GKQLHAHLVQCG-FEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q+G   EA+E+F  M     I P++ ++++IL A +H G +  G +    + ++   F +
Sbjct: 510 QHGHGREALELFDQM-VAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERD---FGI 565

Query: 484 FVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFR 538
                    L+D+ G+ GRI +A  L   +P   +   W AI+S  G    GD  L  + 
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILS--GCRINGDMELGAYA 623

Query: 539 QMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
                 + P+H  T++ L    S +G   +  R   +M++  G+K   K  GC
Sbjct: 624 ADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDR-GVK---KEPGC 672



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 12/261 (4%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           S  +K V S   +++ Y   G L  +   F  + Y++  +W  M+S YV  G   +A+  
Sbjct: 360 SMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKL 419

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
           F Q   +  ++P  YT+   + AC  L     GK++H  +++ GFE       +LL MY 
Sbjct: 420 FNQMR-SEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYA 478

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           R G    AR +F  MP  DS SWNAMIS   Q G+  EAL++ D+M  +G+  D I+  +
Sbjct: 479 RCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLT 538

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKFGMMRHALRVFDQM 305
           IL  C  +  +  G     Y      +F +    +    LI++  + G +  A  +   M
Sbjct: 539 ILTACNHAGLVDDGF---QYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTM 595

Query: 306 -MERDVVSWNSIIAAYEQSND 325
             E     W +I++    + D
Sbjct: 596 PFEPTPAIWEAILSGCRINGD 616



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 22/172 (12%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H K+LHA LV  G   +  +   L+  YA  G +  +R  F  +   +  +WN+MIS 
Sbjct: 448 LKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA 507

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW--- 176
             + G   EA++ F Q  +  G+ PD  +F  +L AC         H  ++  GF++   
Sbjct: 508 LGQHGHGREALELFDQM-VAQGIYPDRISFLTILTACN--------HAGLVDDGFQYFES 558

Query: 177 ---DVFVA------ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISG 218
              D  ++      A L+ +  R G    AR L   MP   + + W A++SG
Sbjct: 559 MERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/609 (38%), Positives = 372/609 (61%), Gaps = 7/609 (1%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN ++S + ++G    AL +   +       +  T    L  CAR  ++ +   + +   
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALP-SSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
             G   ++FV + L+++Y++ G M  A+RVFD M  +D V+W++++A +  +  P+ A  
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            ++ M++ G+  D + +V +        + R   SVHG ++R    M DV+   ++V MY
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRM-DVVTTTSLVSMY 253

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G ++ AC VF  +P ++ ++W+ LI+G+AQNG A EA+++F+ ++  + + P     
Sbjct: 254 AKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQ-ADGLQPCSWAL 312

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           VS L A + VG L+ G  IH  +++  L +   + T ++DMY KCG ++ A  LF ++  
Sbjct: 313 VSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSS 371

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V WNAII+C G HG G  AL  F+++ + G++PDH TF SLL+A SHSGLV EG+ +
Sbjct: 372 RDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 431

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F  M +EFGI+P  KHY C+VDL  R+G +  A++ + +M   P  +IW  LL  C  + 
Sbjct: 432 FDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNK 491

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
            +ELG   + ++ E+  E++G   L+SN+YA   KW+ V E+R L +D G KK PG+S I
Sbjct: 492 KLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 551

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           EV      F   +++HP++ +I   +  L ++M+ LGYVP   FV  D++ED+   +L+ 
Sbjct: 552 EVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQ---LLSY 608

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSERLAIAFG++++ P + + I KNLRVCGDCH+  K+IS+I +REI+VRD+ RFHHFKD
Sbjct: 609 HSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKD 668

Query: 812 GICSCGDYW 820
           G CSCGDYW
Sbjct: 669 GACSCGDYW 677



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 155/514 (30%), Positives = 262/514 (50%), Gaps = 21/514 (4%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L  S T L  + RLHALLVVS   + + SS       A   D + S       S  ++  
Sbjct: 17  LSSSRTTLATLTRLHALLVVSSS-QHILSSLAAAYARAGALDAAESTLAASPSSPSSIAA 75

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN ++S + R G    A+  F    L S  RP+  TF   L AC  L D    + +    
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFR--ALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRA 133

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
              G+  DVFV ++LLH+Y R G    A ++FD MP +D  +W+ M++G+  +G  VEAL
Sbjct: 134 FAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEAL 193

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            +   MR  GVS D + +  ++  C  + N   G  +H  +++H +  ++  + +L++MY
Sbjct: 194 AMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMY 253

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G +  A +VF  M  R+ V+W+++I+ + Q+   + A   F  +Q  G+QP    LV
Sbjct: 254 AKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALV 313

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRR-GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           S     A +   +  +S+HGFI+RR  W     I+G AV+DMY+K G + SA  +F  L 
Sbjct: 314 SALLACASVGFLKLGKSIHGFILRRLEW---QCILGTAVLDMYSKCGSLESARKLFNKLS 370

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            +D++ WN +I     +G   +A+ +FQ + E   I P+  T+ S+L A SH G + +G 
Sbjct: 371 SRDLVLWNAIIACCGTHGCGHDALALFQELNETG-IKPDHATFASLLSALSHSGLVEEGK 429

Query: 469 KIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISC 523
               R+IK    F +  A     C+VD+  + G +++A  +   +    ++  W  ++S 
Sbjct: 430 FWFDRMIKE---FGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSG 486

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
              + + +      +++L+  +RP+ I  ++L++
Sbjct: 487 CLNNKKLELGETIAKKILE--LRPEDIGVLALVS 518


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/667 (37%), Positives = 393/667 (58%), Gaps = 5/667 (0%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD--DMPVRDSGSWNA 214
           R+L    +IH  ++   +    F+  +L+++Y + G  N A  LF       +   +W +
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTS 215

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +I+        ++AL + ++MR  G   +  T +SIL   A +  +L G  +H  I KHG
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
            + N+FV   L++MYAK   M  A+RVFDQM ER++VSWNS+I  +  +N    A G F 
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335

Query: 335 -TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             +++  + P+ +++ S+ S  A +      R VHG +++ G  +    + N+++DMY K
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYG-LVPLTYVMNSLMDMYFK 394

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
               +    +F+ +  +DV++WN L+ G+ QN    EA   F +M     I P++ ++ +
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR-EGILPDEASFST 453

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +L + + + AL QG  IH ++IK     ++ +   L+ MY KCG + DA  +F  +   +
Sbjct: 454 VLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHN 513

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            + W A+IS + +HG  ++ +  F  ML EG+ P H+TFV +L+ACSH+G V EG  +F+
Sbjct: 514 VISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFN 573

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            M++   + P  +HY CMVDL GRAG L  A  FI++MP++P  S+WGALLGACR +GN+
Sbjct: 574 SMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNL 633

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           ++G  A++RLFE++  N G YVL++N+    G+ E  +EVR L    G++K PG S I+V
Sbjct: 634 KMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDV 693

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            N   +F   +R+H   ++IY  L  L   +K  GYV +  FV   +EE+E+E  L  HS
Sbjct: 694 KNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHS 753

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LA+AFG+++ P  SPI+I KNLR CG CH   K  S+I +REIIVRD NRFH F DG 
Sbjct: 754 EKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGF 813

Query: 814 CSCGDYW 820
           CSCGDYW
Sbjct: 814 CSCGDYW 820



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 270/543 (49%), Gaps = 24/543 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD--HISYRNVYTWNSMI 117
           L H  ++H  ++++      F    L+N YA  G L+ +   F   H  ++ + TW S+I
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLI 217

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGF 174
           +         +A+  F Q    SG  P+ +TF  +L A      ++ G+++H  + K GF
Sbjct: 218 THLSHFNMHLQALSLFNQMR-CSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL-D 233
           + ++FV  +L+ MY +    + A ++FD MP R+  SWN+MI G+  +     A+ +  D
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 336

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            +R + V  + ++V+S+L  CA    +  G  +H  +VK+GL    +V N+L++MY K  
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR 396

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
                +++F  + +RDVV+WN ++  + Q++    A  +F  M++ GI PD  +  ++  
Sbjct: 397 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L       ++H  I++ G+     I+G +++ MYAK G +  A  VFEG+   +VI
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILG-SLITMYAKCGSLVDAYQVFEGIEDHNVI 515

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW  +I+ Y  +G A++ IE+F+ M     I P+  T+V +L A SH G + +G+  H  
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLS-EGIEPSHVTFVCVLSACSHTGRVEEGLA-HFN 573

Query: 474 VIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC---HGIH 527
            +K     +       C+VD+ G+ G +D+A      +P + +   W A++     +G  
Sbjct: 574 SMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNL 633

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
             G +A     +M  E   P +  +V L   C+ SG + E      +M    G+    K 
Sbjct: 634 KMGREAAERLFEM--EPYNPGN--YVLLANMCTRSGRLEEANEVRRLM----GVNGVRKE 685

Query: 588 YGC 590
            GC
Sbjct: 686 PGC 688



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 193/384 (50%), Gaps = 5/384 (1%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME-- 307
           +L    ++ ++     IH  I+ +      F+ NNLIN+YAK G +  AL +F       
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           + +V+W S+I      N  + A   F  M+ +G  P+  T  S+ S  A      + + +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H  I + G F  ++ +G A+VDMYAK   ++SA  VF+ +P ++++SWN++I G+  N L
Sbjct: 268 HSLIHKHG-FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
              A+ VF+ +     + PN+ +  S+L A +++G L  G ++H  V+K  L    +V  
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+DMY KC   D+ + LF  V     V WN ++     + + ++A N+F  M  EG+ P
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 446

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           D  +F ++L + +    + +G    H    + G   ++   G ++ ++ + G L  A+  
Sbjct: 447 DEASFSTVLHSSASLAALHQGTA-IHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQV 505

Query: 608 IQNMPVRPDASIWGALLGACRIHG 631
            + +      S W A++ A ++HG
Sbjct: 506 FEGIEDHNVIS-WTAMISAYQLHG 528



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 13/213 (6%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   LH    +H  ++  G +K +     L+  YA  G L  +   F+ I   NV +W +
Sbjct: 460 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 519

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VDGKKIHCSVLKLG 173
           MIS Y   G  ++ ++ F +  L+ G+ P   TF  VL AC +   V+    H + +K  
Sbjct: 520 MISAYQLHGCANQVIELF-EHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI 578

Query: 174 FEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGN---AVE 227
            + +      A ++ +  R G  + A++  + MP++ + S W A++    + GN     E
Sbjct: 579 HDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGRE 638

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           A + L EM       +P     +  +C RS  +
Sbjct: 639 AAERLFEME----PYNPGNYVLLANMCTRSGRL 667


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/709 (35%), Positives = 388/709 (54%), Gaps = 66/709 (9%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           +VF   SLL M+ + G    AR +F +MP RD+ SW  M+ G  ++G   EA+  L +M 
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK----- 291
            +G +    T+ ++L  CA +     G  +H ++VK GL   + V+N+++NMY K     
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAE 216

Query: 292 --------------------------FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                                      G M  A  +F+ M  R +VSWN++IA Y Q+  
Sbjct: 217 TASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGL 276

Query: 326 PITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF------- 377
              A   F+ M  ++ + PD  T+ S+ S  A L + R  + VH +I+R           
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336

Query: 378 ----------------------ME---DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                                 ME   +VI   A+++ Y K+G + SA  +F  +  +DV
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++W  +I GY QNG   EAI++F+ M  C    PN  T  ++L   + +  L  G +IH 
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGP-EPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           R I++ L     V+  ++ MY + G    A  +F QV  R  ++ W ++I     HGQG+
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +ML  GV PD IT+V +L+ACSH+G V+EG+RY+  ++ E  I P + HY CM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL  RAG    A  FI+ MPV PDA  WG+LL ACR+H N EL  +A+++L  +D  N 
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y  ++N+Y+  G+W     +    +++ ++K  G+S   + +K+ +F   +  HP+ +
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            +Y     +  ++K  G+VPD   VL DV+++ KE +L+ HSE+LAIAFG+IS+P K+ +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ KNLRVC DCH   K IS++T+REIIVRD+ RFHHF+DG+CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/488 (22%), Positives = 204/488 (41%), Gaps = 103/488 (21%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF----GMMRHALRVFD 303
           A +L +C  + N  +G  IH   VK GL  + ++ NNL++ Y +     G +R A R+FD
Sbjct: 30  ARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFD 89

Query: 304 Q--MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA---------------------- 339
           +  +  R+V +WNS+++ + +S     A G F  M +                       
Sbjct: 90  EIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAI 149

Query: 340 ---------GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
                    G  P   TL ++ S  A        R VH F+++ G     V + N+V++M
Sbjct: 150 KTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNM 208

Query: 391 YAKLGIINSACAVFEGLPVKDV-------------------------------ISWNTLI 419
           Y K G   +A  VFE +PV+ V                               +SWN +I
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY QNGL ++A+++F  M   + + P++ T  S+L A +++G +R G ++HA +++  +
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS--------------------------- 512
            ++  V   L+  Y K G +++A  +  Q   +                           
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388

Query: 513 ------SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
                   V W A+I  +  +G+ D+A++ FR M+  G  P+  T  ++L+ C+    + 
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G++  H       ++        ++ ++ R+G    A      +  R +   W +++ A
Sbjct: 449 YGKQ-IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 507

Query: 627 CRIHGNME 634
              HG  E
Sbjct: 508 LAQHGQGE 515



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN-VYTWNSMIS 118
           L + K++H   + S   ++   S  ++  YA  G   ++R  FD + +R    TW SMI 
Sbjct: 447 LDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL---KL 172
              + G+  EAV  F +  L +G+ PD  T+  VL AC +   + +GK+ +  +    ++
Sbjct: 507 ALAQHGQGEEAVGLFEEM-LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQI 565

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDI 231
             E   +  A ++ +  R GL + A++    MPV  D+ +W +++S  C+     E  ++
Sbjct: 566 APEMSHY--ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA-CRVHKNAELAEL 622

Query: 232 LDEMRLEGVSMDP------ITVASILPVCAR 256
             E  L   S+DP        +A++   C R
Sbjct: 623 AAEKLL---SIDPNNSGAYSAIANVYSACGR 650


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/589 (39%), Positives = 358/589 (60%), Gaps = 3/589 (0%)

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           LD +    ++  P    + +  CA+S N+     IH ++     E + F+ N+LI++Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A +VFD+M ++D+VSW S+IA Y Q++ P  A G    M +   +P+  T  SL
Sbjct: 99  CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
                   D      +H   ++  W  EDV +G+A++DMYA+ G ++ A AVF+ L  K+
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWH-EDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWN LI+G+A+ G    A+ VF  M+  N       TY SI    + +GAL QG  +H
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQR-NGFEATHFTYSSIFSGLAGIGALEQGKWVH 276

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           A ++K+      FV   ++DMY K G + DA  +F +V     V WN++++    +G G 
Sbjct: 277 AHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGK 336

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A++ F +M   G+  + ITF+ +LTACSH GLV EG+ YF M++E + ++P ++HY  +
Sbjct: 337 EAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTV 395

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GRAG L  A  FI  MP+ P A++WGALL ACR+H N ++G  A+D +F++D ++ 
Sbjct: 396 VDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDS 455

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G  VL+ NIYA+ G W+    VR + +  G+KK P  S +E+ N V +F   + THP+ E
Sbjct: 456 GPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAE 515

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +IY     ++ K++  GYVPD  +VL  V+E E+E  L  HSE++A+AF +I  P  + I
Sbjct: 516 EIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATI 575

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KN+R+CGDCH+  K+IS++ EREI+VRD+NRFHHF +G CSCGDYW
Sbjct: 576 RIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 208/395 (52%), Gaps = 7/395 (1%)

Query: 138 LTSG-LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
           L SG L P    +   + AC   +NL D +KIH  +    FE D F+  SL+H+YC+ G 
Sbjct: 42  LDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS 101

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A K+FD M  +D  SW ++I+GY Q+    EA+ +L  M       +  T AS+L  
Sbjct: 102 VVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
                +   G  IH   VK     +++V + L++MYA+ G M  A  VFD++  ++ VSW
Sbjct: 162 AGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSW 221

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N++I+ + +  D  TA   F  MQ+ G +    T  S+ S +A +      + VH  +++
Sbjct: 222 NALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVK 281

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
               +    +GN ++DMYAK G +  A  VFE +  KD+++WN+++T +AQ GL  EA+ 
Sbjct: 282 SRQKLT-AFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVS 340

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
            F+ M +   I  NQ T++ IL A SH G +++G      + +  L  ++     +VD+ 
Sbjct: 341 HFEEMRKSG-IYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLL 399

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           G+ G ++ A+   +++P   ++  W A+++   +H
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 182/367 (49%), Gaps = 8/367 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +++H  L  S      F    L++ Y   G +  +   FD +  +++ +W S+I+ 
Sbjct: 67  LDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAG 126

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y +    +EA+       L    +P+ +TF  +LKA     D   G +IH   +K  +  
Sbjct: 127 YAQNDMPAEAIGLLPGM-LKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHE 185

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           DV+V ++LL MY R G  ++A  +FD +  ++  SWNA+ISG+ + G+   AL +  EM+
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G      T +SI    A    +  G  +H ++VK   +   FV N +++MYAK G M 
Sbjct: 246 RNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMI 305

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A +VF++++ +D+V+WNS++ A+ Q      A   F  M+++GI  + +T + + +  +
Sbjct: 306 DARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACS 365

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGN-AVVDMYAKLGIINSACAVFEGLPVKDVIS- 414
                +  +  H F M + + +E  I     VVD+  + G++N A      +P++   + 
Sbjct: 366 HGGLVKEGK--HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAV 423

Query: 415 WNTLITG 421
           W  L+  
Sbjct: 424 WGALLAA 430



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +HA +V S +  T F    +++ YA  G +  +R  F+ +  +++ TWNSM++ 
Sbjct: 269 LEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW 176
           + + G   EAV  F +    SG+  +  TF  +L AC +   + +GK     + +   E 
Sbjct: 329 FAQYGLGKEAVSHFEEMR-KSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEP 387

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNA 225
           ++    +++ +  R GL N A      MP+  + + W A+++      NA
Sbjct: 388 EIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNA 437


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/724 (36%), Positives = 417/724 (57%), Gaps = 30/724 (4%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           I++R++ T  S+ ++Y++             F  TS    + +    +   CR L   ++
Sbjct: 19  IAHRDLRTGKSLHALYIK------------SFVPTSTYLSNHFLL--LYSKCRRLSAARR 64

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
               V     + +VF   +L+  Y +     VA +LFD+MP  DS S+N +I+ Y + G+
Sbjct: 65  ----VFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
              A  +  EMR   + MD  T++ I+  C  +  ++  L  H   V  GL+  + V N 
Sbjct: 121 TQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQL--HALSVVTGLDSYVSVGNA 178

Query: 285 LINMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           LI  Y+K G ++ A R+F  + E RD VSWNS++ AY Q  +   A   +  M   G+  
Sbjct: 179 LITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIV 238

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC-A 402
           D+ TL S+ +    + D       H  +++ G+  ++  +G+ ++D+Y+K G     C  
Sbjct: 239 DIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYH-QNSHVGSGLIDLYSKCGGCMLDCRK 297

Query: 403 VFEGLPVKDVISWNTLITGYA-QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
           VF+ +   D++ WNT+I+GY+    L+ EA+E F+ ++      P+  + V ++ A S++
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGH-RPDDCSLVCVISACSNM 356

Query: 462 GALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            +  QG ++H   +K +     + V   L+ MY KCG + DA +LF  +P  ++V +N++
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  HG G ++L+ F++ML+ G  P +ITF+S+L AC+H+G V +G+ YF+MM+++FG
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I+P   H+ CM+DL GRAG L  A   I+ +P  P    W ALLGACRIHGN+EL   A+
Sbjct: 477 IEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAA 536

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +RL ++D  N   YV+++NIY++ G+ +    VR L RDRG+KK PG S IEVN ++ IF
Sbjct: 537 NRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIF 596

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL----QDVEEDEKEHILTSHSERL 756
              +  HP  +KI + L  +  K+K +GY P+    L      V + E+E  L  HSE+L
Sbjct: 597 VAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKL 656

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           A++FG++S+    PI +FKNLR+C DCHN  K+IS++ +REI VRDS+RFH FKDG CSC
Sbjct: 657 AVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSC 716

Query: 817 GDYW 820
           G YW
Sbjct: 717 GGYW 720



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 265/543 (48%), Gaps = 21/543 (3%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           VFS   L++ YA    +  +   FD +   +  ++N++I+ Y R G    A   F +   
Sbjct: 74  VFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR- 132

Query: 139 TSGLRPDFYTFPPVLKACR-NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
            + L  D +T   ++ AC  N+   +++H   +  G +  V V  +L+  Y + G    A
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192

Query: 198 RKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           R++F  +   RD  SWN+M+  Y Q     +AL++  EM + G+ +D  T+AS+L     
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF-GMMRHALRVFDQMMERDVVSWNS 315
             ++L GL  H  ++K G   N  V + LI++Y+K  G M    +VFD++   D+V WN+
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312

Query: 316 IIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +I+ Y    D    A   F  +Q  G +PD  +LV + S  + ++     R VHG  ++ 
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                 + + NA++ MY+K G +  A  +F+ +P  + +S+N++I GYAQ+G+  +++ +
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDM 492
           FQ M E     P   T++S+L A +H G +  G KI+  ++K     +      +C++D+
Sbjct: 433 FQRMLEMG-FTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDL 490

Query: 493 YGKCGRIDDAMSLFYQVPRSSS-VPWNAIISCHGIHGQGD---KALNFFRQMLDEGVRPD 548
            G+ G++ +A  L   +P       W+A++    IHG  +   KA N   Q+      P 
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP- 549

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
              +V L    S +G + +      +M++  G+K   K  GC      R  H+ +A +  
Sbjct: 550 ---YVMLANIYSDNGRLQDAASVRKLMRDR-GVK---KKPGCSWIEVNRRIHIFVAEDTF 602

Query: 609 QNM 611
             M
Sbjct: 603 HPM 605



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 199/416 (47%), Gaps = 11/416 (2%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-RNVYTWNSMISVYV 121
           +++LHAL VV+G    V     L+  Y+  G L  +R  F  +S  R+  +WNSM+  Y+
Sbjct: 157 IRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYM 216

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
           +    S+A++ + + T+  GL  D +T   VL A  N+ D   G + H  ++K G+  + 
Sbjct: 217 QHREGSKALELYLEMTV-RGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNS 275

Query: 179 FVAASLLHMYCRFGLANV-ARKLFDDMPVRDSGSWNAMISGYCQSGN-AVEALDILDEMR 236
            V + L+ +Y + G   +  RK+FD++   D   WN MISGY    + + EAL+   +++
Sbjct: 276 HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQ 335

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLINMYAKFGMM 295
           + G   D  ++  ++  C+   +   G  +H   +K  +  N + V+N LI MY+K G +
Sbjct: 336 VVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNL 395

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           R A  +FD M E + VS+NS+IA Y Q      +   F  M + G  P  +T +S+ +  
Sbjct: 396 RDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAAC 455

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVIS 414
           A      + +     + ++     +    + ++D+  + G ++ A  + E +P       
Sbjct: 456 AHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFF 515

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           W+ L+     +G    AI+    + + + +N     YV +   YS  G L+    +
Sbjct: 516 WSALLGACRIHGNVELAIKAANRLLQLDPLNA--APYVMLANIYSDNGRLQDAASV 569



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 199/417 (47%), Gaps = 43/417 (10%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L  C    ++ +G  +H   +K  +  + ++SN+ + +Y+K   +  A RVFD   + +V
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV--- 367
            S+N++I+AY + +    AH  F  M     QPD ++  +L +  A+  D + +  +   
Sbjct: 75  FSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 368 --HGFIMRRGWFMEDVI---------------------------IGNAVVDMYAKLGIIN 398
               F+   G+ +  +I                           +GNA++  Y+K G + 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 399 SACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
            A  +F  L   +D +SWN+++  Y Q+   S+A+E++  M     +  +  T  S+L A
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEM-TVRGLIVDIFTLASVLTA 249

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR-IDDAMSLFYQVPRSSSVP 516
           +++V  L  G++ HA++IK+    +  V + L+D+Y KCG  + D   +F ++     V 
Sbjct: 250 FTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309

Query: 517 WNAIISCHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           WN +IS + ++    D+AL  FRQ+   G RPD  + V +++ACS+    S+G R  H +
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQG-RQVHGL 368

Query: 576 QEEFGIKPH-LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
             +  I  + +     ++ ++ + G+L  A      MP     S + +++     HG
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVS-YNSMIAGYAQHG 424


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/727 (35%), Positives = 401/727 (55%), Gaps = 72/727 (9%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           + H  +LK G + D +++A L+  Y  +   N A  +   +P     S++++I    ++ 
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +++ +   M   G+  D   + ++  VCA      +G  IH      GL+ + FV  
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVV-------------------------------- 311
           +L +MY + G M  A +VFD+M E+DVV                                
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 312 ---SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
              SWN I++ + +S     A   F  M   G  PD +T+ S+   V    +    R +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE--------------------GLP 408
           G+++++G   +  +I +A++DMY K G +     +F+                    GL 
Sbjct: 276 GYVIKQGLLKDKCVI-SAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334

Query: 409 VK---------------DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            K               +V+SW ++I G AQNG   EA+E+F+ M+    + PN+ T  S
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNRVTIPS 393

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +LPA  ++ AL  G   H   ++  L  DV V + L+DMY KCGRI  +  +F  +P  +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN 453

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V WN++++ + +HG+  + ++ F  ++   ++PD I+F SLL+AC   GL  EG +YF+
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFN 513

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
           MM EE+GIKP L+HY CMV+L GRAG L  A++ I+ +P  PD+ +WGALL +CR+  N+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNV 573

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           +L  +A+ +LF ++ EN G YVLMSNIYA  G W  VD +R+     GLKK PG S I+V
Sbjct: 574 DLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            NKV      +++HP+ ++I +++  ++ +M+  G+ P+  F LQDVEE E+E +L  HS
Sbjct: 634 KNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHS 693

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LA+ FG++++P  +P+Q+ KNLR+CGDCH   KFIS    REI +RD+NRFHHFKDGI
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753

Query: 814 CSCGDYW 820
           CSCGD+W
Sbjct: 754 CSCGDFW 760


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 214/542 (39%), Positives = 352/542 (64%), Gaps = 3/542 (0%)

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-Q 338
           F+ + L++ Y + G  + AL +FD++ ++D+VSWNS+I+ + +  D     G    M+ +
Sbjct: 74  FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFE 133

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G++P+ +T++ + S  A + +    + +HG  ++ G  +E V + N+++++Y K G + 
Sbjct: 134 MGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLE-VKVVNSLINLYGKCGCLE 192

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
           +AC +FEG+ V+ ++SWN+++  +   GLA + I  F MM     IN +Q T VS+L A 
Sbjct: 193 AACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAG-INSDQATVVSLLLAC 251

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
            ++G  +    +H  ++   L  ++ +AT L+D+Y K G + D+  +F  +    +V W 
Sbjct: 252 ENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWT 311

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           A++S + +HG+G +A+  F  M+ EGV PDH+TF  LL+ACSHSGLV EG+ YF +M E 
Sbjct: 312 AMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEF 371

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +G++  ++HY CMVDL GR+GHL  A+  I++MP+ P++ +WGAL+GACR+ GN+ELG  
Sbjct: 372 YGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKE 431

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            ++RLF +D  +   Y+ +SN+Y+  G+W    +VR+L ++R L + PG S IE  NK+ 
Sbjct: 432 VAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIH 491

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+++HP  E+IY++L  L  K + +G+     +VL DV+E+ KE ++  HSE+LAI
Sbjct: 492 CFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAI 551

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG++ +    P+ I KN+R+CGDCH + K IS I +R II+RD+ RFHHF +G+CSCGD
Sbjct: 552 AFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGD 611

Query: 819 YW 820
           YW
Sbjct: 612 YW 613



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 198/425 (46%), Gaps = 10/425 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
             +C+ + + + LH  ++ S      F   +LV+ Y  LG    +   FD +  +++ +W
Sbjct: 48  ISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSW 107

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
           NS+IS + R   L   +   ++     GL+P+  T  PV+ AC  + +   GK IH   +
Sbjct: 108 NSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAV 167

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G   +V V  SL+++Y + G    A  LF+ M V+   SWN+M++ +   G A + + 
Sbjct: 168 KSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIG 227

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
               MR  G++ D  TV S+L  C           +H YI+  GL+ NL ++  L+++YA
Sbjct: 228 YFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYA 287

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  + +VF  M+  D V+W +++++Y        A   F  M + G+ PD +T   
Sbjct: 288 KLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTH 347

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           L S  +        ++    IM   + +E  V   + +VD+  + G +N A  + + +P+
Sbjct: 348 LLSACSHSGLVEEGKNYFK-IMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPM 406

Query: 410 K-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-TYVSILPAYSHVGALRQG 467
           + +   W  LI      G      EV    E    ++P+    Y+++   YS  G  R  
Sbjct: 407 EPNSGVWGALIGACRVRGNIELGKEV---AERLFSLDPSDSRNYITLSNMYSAAGQWRDA 463

Query: 468 IKIHA 472
            K+ A
Sbjct: 464 SKVRA 468


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/564 (41%), Positives = 366/564 (64%), Gaps = 8/564 (1%)

Query: 263 GLLIHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           G  +HL  ++ GL   + F ++ L++MY        A + FD++   + V   ++ + Y 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLT--SIVAQLNDCRNSRSVHGFIMRRGWFME 379
           ++N    +   F  +  +G    +    +L   S  A++ DC  + S+H  +++ G    
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTG-LDG 226

Query: 380 DVIIGNAVVDMYAKLGI--INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-Q 436
           D  + N ++D YAK G   + +A  VF+ +  KDV+SWN++I  YAQNG++++A+ ++ +
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRK 285

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
           M+     I  N  T  +IL A +H G ++ G  IH +V++  L  +V+V T +VDMY KC
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKC 345

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           GR++ A   F ++   + + W+A+I+ +G+HG G +AL+ F +M   G  P++ITF+S+L
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSH+GL+ +G+ +++ M++ FGI+P ++HYGCMVDL GRAG L  A+  I+ M V+PD
Sbjct: 406 AACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 465

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A+IWGALL ACRIH N+EL  +++ RLFE+D+ N GYYVL+SNIYA  G W+ V+ +R L
Sbjct: 466 AAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVL 525

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            + RG++K PG+SS+E+  +  +FY G+++HP++++IY  L  L  KM+  GYVP+   V
Sbjct: 526 VKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSV 585

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L D++E+EK   L  HSE+LAIAF +++S P S I + KNLRVC DCH   K I++I +R
Sbjct: 586 LHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQR 645

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           EIIVRD  RFHHFKDG CSCGDYW
Sbjct: 646 EIIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 197/376 (52%), Gaps = 14/376 (3%)

Query: 162 GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+++H   ++ G F  D F A++LLHMY        ARK FD++P  +     AM SGY 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFN 278
           ++     +L +  ++   G +      A+++   A +     G+   +H  +VK GL+ +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 279 LFVSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             V N +++ YAK G   +  A +VFD  ME+DVVSWNS+IA Y Q+     A G +  M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDT-MEKDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 337 Q--QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
                 I+ + +TL ++    A     +  + +H  ++R G   E+V +G +VVDMY+K 
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMG-LEENVYVGTSVVDMYSKC 345

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G +  A   F+ +  K+++SW+ +ITGY  +G   EA+++F  M    + NPN  T++S+
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQ-NPNYITFISV 404

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-R 511
           L A SH G L +G +     +K     +  V    C+VD+ G+ G +D+A  L  ++  +
Sbjct: 405 LAACSHAGLLDKG-RYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVK 463

Query: 512 SSSVPWNAIISCHGIH 527
             +  W A++S   IH
Sbjct: 464 PDAAIWGALLSACRIH 479



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 181/368 (49%), Gaps = 11/368 (2%)

Query: 64  KRLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           ++LH L + SG   +  FS++ L++ Y +      +R  FD I   N     +M S YVR
Sbjct: 109 RQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVR 168

Query: 123 CGRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
              +  ++  F +   + S    D         A   + D      +H  V+K G + D 
Sbjct: 169 NNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDA 228

Query: 179 FVAASLLHMYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM- 235
            V  ++L  Y + G  ++  ARK+FD M  +D  SWN+MI+ Y Q+G + +AL +  +M 
Sbjct: 229 GVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRKML 287

Query: 236 RLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
            + G +  + +T+++IL  CA +  I +G  IH  +V+ GLE N++V  ++++MY+K G 
Sbjct: 288 NVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGR 347

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A + F ++ E++++SW+++I  Y        A   F  M ++G  P+ +T +S+ + 
Sbjct: 348 VEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAA 407

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVI 413
            +        R  +  + +R      V     +VD+  + G ++ A  + + + VK D  
Sbjct: 408 CSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAA 467

Query: 414 SWNTLITG 421
            W  L++ 
Sbjct: 468 IWGALLSA 475



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 7/173 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  +V  G  + V+  T +V+ Y+  G +  +R  F  I  +N+ +W++MI+ Y   
Sbjct: 317 KCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMH 376

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK--LGFEWDVF 179
           G   EA+D F +    SG  P++ TF  VL AC +  L+D  +   + +K   G E  V 
Sbjct: 377 GHGQEALDIFNEMC-RSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVE 435

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDI 231
               ++ +  R G  + A  L  +M V+ D+  W A++S  C+    VE  +I
Sbjct: 436 HYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSA-CRIHKNVELAEI 487


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/753 (34%), Positives = 418/753 (55%), Gaps = 84/753 (11%)

Query: 147 YTFPPVLKACRNLVDGKKIHCSVLKLGF---------EWDVFVAASLLHMYCRFGLANVA 197
           + F P       L+D   ++C   +L +         E D     +++  YC  G   +A
Sbjct: 43  FGFQPRAHILNRLID---VYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99

Query: 198 RKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           R +F+  PV  RD+  +NAMI+G+  + +   A+++  +M+ EG   D  T AS+L   A
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159

Query: 256 R-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG----MMRHALRVFDQMMERDV 310
             +D+    +  H   +K G  +   VSN L+++Y+K      ++  A +VFD+++E+D 
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219

Query: 311 VSWNSIIAAYEQS----------------------NDPITAH---GFFTT-------MQQ 338
            SW +++  Y ++                      N  I+ +   GF+         M  
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +GI+ D  T  S+    A     +  + VH +++RR  F       N++V +Y K G  +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFD 337

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN------------- 445
            A A+FE +P KD++SWN L++GY  +G   EA  +F+ M+E N ++             
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397

Query: 446 -----------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
                            P    +   + + + +GA   G + HA+++K      +     
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           L+ MY KCG +++A  +F  +P   SV WNA+I+  G HG G +A++ + +ML +G+RPD
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            IT +++LTACSH+GLV +G++YF  M+  + I P   HY  ++DL  R+G    A + I
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           +++P +P A IW ALL  CR+HGNMELG +A+D+LF +  E+ G Y+L+SN++A  G+WE
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWE 637

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V  VR L RDRG+KK    S IE+  +V  F   + +HP+ E +Y  L++L  +M+ LG
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697

Query: 729 YVPDKSFVLQDVEED-EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           YVPD SFVL DVE D  KE +LT+HSE++A+AFG++  PP + I+IFKNLR CGDCHN+ 
Sbjct: 698 YVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFF 757

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +F+S + +R+II+RD  RFHHF++G CSCG++W
Sbjct: 758 RFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/612 (24%), Positives = 283/612 (46%), Gaps = 91/612 (14%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRN 109
           D++   ++L++ ++L   +    KI    + T +V+ Y   GD++ +R  F+   +  R+
Sbjct: 57  DVYCKSSELNYARQLFDEISEPDKI----ARTTMVSGYCASGDITLARGVFEKAPVCMRD 112

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----I 165
              +N+MI+ +        A++ F +     G +PD +TF  VL     + D +K     
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQF 171

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFG----LANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           H + LK G  +   V+ +L+ +Y +      L + ARK+FD++  +D  SW  M++GY +
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231

Query: 222 SG---------------------NAV-----------EALDILDEMRLEGVSMDPITVAS 249
           +G                     NA+           EAL+++  M   G+ +D  T  S
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           ++  CA +  +  G  +H Y+++   +F+    N+L+++Y K G    A  +F++M  +D
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350

Query: 310 VVSWNSIIAAYEQSN------------------------DPITAHGF-------FTTMQQ 338
           +VSWN++++ Y  S                           +  +GF       F+ M++
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G +P            A L    N +  H  +++ G F   +  GNA++ MYAK G++ 
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG-FDSSLSAGNALITMYAKCGVVE 469

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  +P  D +SWN LI    Q+G  +EA++V++ M +   I P++ T +++L A 
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRITLLTVLTAC 528

Query: 459 SHVGALRQGIKIH---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
           SH G + QG K       V +     D +    L+D+  + G+  DA S+   +P + ++
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTA 586

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFH 573
             W A++S   +HG  +  +    ++   G+ P+H  T++ L    + +G   E  R   
Sbjct: 587 EIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644

Query: 574 MMQEEFGIKPHL 585
           +M++  G+K  +
Sbjct: 645 LMRDR-GVKKEV 655



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 196/478 (41%), Gaps = 111/478 (23%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME------------------ 307
           +H  I+  G +    + N LI++Y K   + +A ++FD++ E                  
Sbjct: 36  VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 308 ---------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
                          RD V +N++I  +  +ND  +A   F  M+  G +PD  T  S+ 
Sbjct: 96  ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155

Query: 353 SIVAQL-NDCRNSRSVHGFIMRRG-WFMEDVIIGNAVVDMYAKLG----IINSACAVFEG 406
           + +A + +D +     H   ++ G  ++  V   NA+V +Y+K      +++SA  VF+ 
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSV--SNALVSVYSKCASSPSLLHSARKVFDE 213

Query: 407 LPVKDVISWNTLITGYAQN--------------------------------GLASEAIEV 434
           +  KD  SW T++TGY +N                                G   EA+E+
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
            + M     I  ++ TY S++ A +  G L+ G ++HA V++    F       LV +Y 
Sbjct: 274 VRRMVSSG-IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYY 331

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCH------------------------------ 524
           KCG+ D+A ++F ++P    V WNA++S +                              
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391

Query: 525 -GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              +G G++ L  F  M  EG  P    F   + +C+  G    GQ+Y H    + G   
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKIGFDS 450

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            L     ++ ++ + G +  A    + MP   D+  W AL+ A   HG+   GA A D
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGH---GAEAVD 504



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 37/256 (14%)

Query: 44  ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  E  +  + ++C     L   K++HA ++        F ++ LV+ Y   G    +R 
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS-LVSLYYKCGKFDEARA 341

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT---------LTSGL--------- 142
            F+ +  +++ +WN+++S YV  G + EA   F +           + SGL         
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401

Query: 143 ------------RPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHM 187
                        P  Y F   +K+C  L    +G++ H  +LK+GF+  +    +L+ M
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461

Query: 188 YCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 247
           Y + G+   AR++F  MP  DS SWNA+I+   Q G+  EA+D+ +EM  +G+  D IT+
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521

Query: 248 ASILPVCARSDNILSG 263
            ++L  C+ +  +  G
Sbjct: 522 LTVLTACSHAGLVDQG 537



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 87/391 (22%)

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
           +R+VHG I+  G F     I N ++D+Y K   +N A  +F+ +   D I+  T+++GY 
Sbjct: 33  ARAVHGNIITFG-FQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91

Query: 424 QNGLASEAIEVFQMMEEC---------------------NEIN-----------PNQGTY 451
            +G  + A  VF+    C                     + IN           P+  T+
Sbjct: 92  ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151

Query: 452 VSILPAYSHVG-ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR----IDDAMSLF 506
            S+L   + V    +Q ++ HA  +K+   +   V+  LV +Y KC      +  A  +F
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211

Query: 507 YQVPRSSSVPW--------------------------------NAIISCHGIHGQGDKAL 534
            ++       W                                NA+IS +   G   +AL
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY--FHMMQEEFGIKPHLKHY-GCM 591
              R+M+  G+  D  T+ S++ AC+ +GL+  G++   + + +E+F       H+   +
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSL 326

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF--EVDSE 649
           V L+ + G    A    + MP + D   W ALL      G +  G +   +L   E+  +
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS-----GYVSSGHIGEAKLIFKEMKEK 380

Query: 650 NV-GYYVLMSNIYANVGKWEGVDEVRSLARD 679
           N+  + +++S +  N    EG+     + R+
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKRE 411


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/724 (36%), Positives = 398/724 (54%), Gaps = 15/724 (2%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKK 164
           RNV +WNS+IS Y + G   E ++ F +  + S LR D +TF   L  C   +D   G+ 
Sbjct: 4   RNVVSWNSLISGYTQMGFYHEVMNLFKEARM-SDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH  +   G    V +  SL+ MYC+ G  + AR +F+     DS SWN++I+GY + G+
Sbjct: 63  IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNLFVS 282
             E L +L +M   G++++   + S L  C    S +I  G ++H   VK GL+ ++ V 
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 182

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPIT--AHGFFTTMQ 337
             L++ YAK G +  A ++F  M + +VV +N++IA +   E   D     A   F  MQ
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
             G++P   T  S+    + +      + +H  I +      D  IGNA+V++Y+  G I
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYN-LQSDEFIGNALVELYSLSGSI 301

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                 F   P  DV+SW +LI G+ QNG     + +F  +       P++ T   +L A
Sbjct: 302 EDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR-KPDEFTISIMLSA 360

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +++ A++ G +IHA  IK  +     +    + MY KCG ID A   F +      V W
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           + +IS +  HG   +A++ F  M   G+ P+HITF+ +L ACSH GLV EG RYF +M++
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           + GI P++KH  C+VDL GRAG L  A +FI +     D  +W +LL ACR+H   + G 
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             ++R+ E++ E    YVL+ NIY + G      E+R+L +DRG+KK PG S IEV N V
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 600

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS-HSERL 756
             F  G+R+HP  + IY +L  +  ++K L Y+ D+  V    E   K++ + S HSE+L
Sbjct: 601 HSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVSYHSEKL 659

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           A+ FGIIS P  +P+++ KNLR C  CH   K  S++  REII+RD  RFH F+DG CSC
Sbjct: 660 AVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSC 719

Query: 817 GDYW 820
           GDYW
Sbjct: 720 GDYW 723



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 241/480 (50%), Gaps = 15/480 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HAL+ VSG    V  +  L++ Y   G + ++R  F+     +  +WNS+I+ YVR 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC-----RNLVDGKKIHCSVLKLGFEWDV 178
           G   E +    +  L  GL  + Y     LKAC      ++  GK +H   +KLG + DV
Sbjct: 121 GSNDEMLRLLVKM-LRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN-----AVEALDILD 233
            V  +LL  Y + G    A K+F  MP  +   +NAMI+G+ Q        A EA+ +  
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           EM+  G+     T +SIL  C+  +    G  IH  I K+ L+ + F+ N L+ +Y+  G
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +   L+ F    + DVVSW S+I  + Q+         F  +  +G +PD  T+  + S
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L   ++   +H + ++ G      II N+ + MYAK G I+SA   F+     D++
Sbjct: 360 ACANLAAVKSGEQIHAYAIKTG-IGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW+ +I+  AQ+G A EA+++F++M+    I PN  T++ +L A SH G + +G++    
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSG-IAPNHITFLGVLVACSHGGLVEEGLRYFEI 477

Query: 474 VIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           + K+  +  +V  + C+VD+ G+ GR+ +A S           V W +++S   +H   D
Sbjct: 478 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 537



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 222/437 (50%), Gaps = 15/437 (3%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           MP R+  SWN++ISGY Q G   E +++  E R+  + +D  T ++ L VC R+ ++  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ- 322
            LIH  I   GL   + ++N+LI+MY K G +  A  VF+   E D VSWNS+IA Y + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 323 -SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ--LNDCRNSRSVHGFIMRRGWFME 379
            SND +        M + G+  +   L S          +     + +HG  ++ G  + 
Sbjct: 121 GSNDEMLR--LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL- 177

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-----NGLASEAIEV 434
           DV++G A++D YAK+G +  A  +F+ +P  +V+ +N +I G+ Q     +  A+EA+ +
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F  M+    + P++ T+ SIL A S + A   G +IHA++ K  L  D F+   LV++Y 
Sbjct: 238 FFEMQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 296

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
             G I+D +  F+  P+   V W ++I  H  +GQ +  L  F ++L  G +PD  T   
Sbjct: 297 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 356

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +L+AC++   V  G++  H    + GI          + ++ + G +  A N        
Sbjct: 357 MLSACANLAAVKSGEQ-IHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTFKETKN 414

Query: 615 PDASIWGALLGACRIHG 631
           PD   W  ++ +   HG
Sbjct: 415 PDIVSWSVMISSNAQHG 431



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 188/430 (43%), Gaps = 27/430 (6%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LH   V  G    V   T L++ YA +GDL  +   F  +   NV  +N+MI+ +++ 
Sbjct: 164 KMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQM 223

Query: 124 GRLS-----EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
             ++     EA+  F++   + G++P  +TF  +LKAC  +     GK+IH  + K   +
Sbjct: 224 ETMADEFANEAMYLFFEMQ-SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 282

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            D F+  +L+ +Y   G      K F   P  D  SW ++I G+ Q+G     L +  E+
Sbjct: 283 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 342

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
              G   D  T++ +L  CA    + SG  IH Y +K G+     + N+ I MYAK G +
Sbjct: 343 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDI 402

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             A   F +    D+VSW+ +I++  Q      A   F  M+ +GI P+ +T + +    
Sbjct: 403 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 462

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV-----FEGLPVK 410
           +              + +      +V     +VD+  + G +  A +      FEG PV 
Sbjct: 463 SHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVM 522

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN-QGTYVSILPAYSHVGALRQGIK 469
               W +L++    +        V    E   E+ P    +YV +   Y+       GI+
Sbjct: 523 ----WRSLLSACRVHKATDTGKRV---AERVIELEPEAAASYVLLYNIYNDA-----GIQ 570

Query: 470 IHARVIKNCL 479
           + A  I+N +
Sbjct: 571 MPATEIRNLM 580



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 13/211 (6%)

Query: 47  EIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     +  +C  L  VK   ++HA  + +G           +  YA  GD+  +  TF 
Sbjct: 351 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFK 410

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD 161
                ++ +W+ MIS   + G   EAVD F +    SG+ P+  TF  VL AC +  LV+
Sbjct: 411 ETKNPDIVSWSVMISSNAQHGCAKEAVDLF-ELMKGSGIAPNHITFLGVLVACSHGGLVE 469

Query: 162 GKKIHCSVLKL--GFEWDVFVAASLLHMYCRFG-LANVARKLFDDMPVRDSGSWNAMISG 218
               +  ++K   G   +V  +A ++ +  R G LA     + D     D   W +++S 
Sbjct: 470 EGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
            C+   A +    + E  +E   ++P   AS
Sbjct: 530 -CRVHKATDTGKRVAERVIE---LEPEAAAS 556


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/616 (39%), Positives = 373/616 (60%), Gaps = 16/616 (2%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPI--TVASILPVCARSDNILSGLLIHLYI 270
           N +I   C+ GN  +AL +L          +P   T   ++   AR +++   L +H  +
Sbjct: 42  NHLIQSLCKQGNLKQALYLLSH------ESNPTQQTCELLILSAARRNSLSDALDVHQLL 95

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           V  G + + F++  LINM+++   + +A +VFD+  +R +  WN++  A   +       
Sbjct: 96  VDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVL 155

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC-----RNSRSVHGFIMRRGWFMEDVIIGN 385
             +  M   G+  D  T   L       ++C     +  + +H  I+R G +   V +  
Sbjct: 156 ELYPRMNMMGVSSDRFTYTYLLKACVA-SECLVSFLQKGKEIHAHILRHG-YGAHVHVMT 213

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEI 444
            ++DMYA+ G ++ A AVF+ +PVK+V+SW+ +I  YA+NG   EA+E+F +MM   ++ 
Sbjct: 214 TLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDS 273

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN  T VS+L A +   AL QG  IHA +++  L   + V + L+ MY +CG+++    
Sbjct: 274 VPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQL 333

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++ +   V WN++IS +G+HG G KA+  F +M+D G  P HI+F+S+L ACSH+GL
Sbjct: 334 IFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGL 393

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG++ F  M +E GI+P ++HY CMVDL GRA  L  A   I+++ + P   +WG+LL
Sbjct: 394 VEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLL 453

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACRIH ++EL   AS RLF+++  N G YVL+++IYA    W+ V  V+ L   R L+K
Sbjct: 454 GACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQK 513

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S IEV  K+  F + +  +P+ E+++  L NL+ +MK  GY P    VL D++++E
Sbjct: 514 VPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEE 573

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KE I+  HSE+LA+AFG+I++     I+I KNLR+C DCH+ TKFIS+  +REI+VRD N
Sbjct: 574 KERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLN 633

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHFKDG+CSCGDYW
Sbjct: 634 RFHHFKDGVCSCGDYW 649



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 210/388 (54%), Gaps = 16/388 (4%)

Query: 152 VLKACR--NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           +L A R  +L D   +H  ++  GF+ D F+A  L++M+      + ARK+FD    R  
Sbjct: 76  ILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTI 135

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS----GLL 265
             WNA+      +G   + L++   M + GVS D  T   +L  C  S+ ++S    G  
Sbjct: 136 YVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKE 195

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH +I++HG   ++ V   L++MYA+FG + +A  VFD+M  ++VVSW+++IA Y ++  
Sbjct: 196 IHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGK 255

Query: 326 PITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI- 382
           P  A   F  M        P+ +T+VS+    A        + +H +I+RRG  ++ ++ 
Sbjct: 256 PYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRG--LDSILP 313

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + +A++ MYA+ G + S   +F+ +  KDV+ WN+LI+ Y  +G   +AI++F+ M + +
Sbjct: 314 VISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMID-H 372

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDD 501
             +P+  +++S+L A SH G + +G K+   ++K + +   V    C+VD+ G+  R+D+
Sbjct: 373 GFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDE 432

Query: 502 AMSLFYQVPRSSSVP--WNAIISCHGIH 527
           A  +   + R    P  W +++    IH
Sbjct: 433 AAKIIEDL-RIEPGPKVWGSLLGACRIH 459



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 180/354 (50%), Gaps = 10/354 (2%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H LLV  G  +  F +TKL+N ++ L  +  +R  FD    R +Y WN++       GR
Sbjct: 91  VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-------LVDGKKIHCSVLKLGFEWDV 178
            ++ ++ + +  +  G+  D +T+  +LKAC         L  GK+IH  +L+ G+   V
Sbjct: 151 GNDVLELYPRMNMM-GVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHV 209

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V  +L+ MY RFG  + A  +FD+MPV++  SW+AMI+ Y ++G   EAL++  EM L 
Sbjct: 210 HVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLN 269

Query: 239 GVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
                P  +T+ S+L  CA    +  G LIH YI++ GL+  L V + LI MYA+ G + 
Sbjct: 270 THDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLE 329

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
               +FD+M ++DVV WNS+I++Y        A   F  M   G  P  ++ +S+    +
Sbjct: 330 SGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACS 389

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
                   + +   +++       V     +VD+  +   ++ A  + E L ++
Sbjct: 390 HTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIE 443



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 135/266 (50%), Gaps = 6/266 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +HA ++  G    V   T L++ YA  G +S++   FD +  +NV +W++MI+ 
Sbjct: 190 LQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIAC 249

Query: 120 YVRCGRLSEAVDCFYQFTL-TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFE 175
           Y + G+  EA++ F +  L T    P+  T   VL+AC     L  GK IH  +L+ G +
Sbjct: 250 YAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLD 309

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
             + V ++L+ MY R G     + +FD M  +D   WN++IS Y   G   +A+ I +EM
Sbjct: 310 SILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEM 369

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGM 294
              G S   I+  S+L  C+ +  +  G  +   +VK HG++ ++     ++++  +   
Sbjct: 370 IDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANR 429

Query: 295 MRHALRVFDQM-MERDVVSWNSIIAA 319
           +  A ++ + + +E     W S++ A
Sbjct: 430 LDEAAKIIEDLRIEPGPKVWGSLLGA 455



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 10/177 (5%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + Q+C     L   K +HA ++  G    +   + L+  YA  G L   +  FD +  ++
Sbjct: 283 VLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKD 342

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           V  WNS+IS Y   G   +A+  F +  +  G  P   +F  VL AC +   + +GKK+ 
Sbjct: 343 VVLWNSLISSYGLHGYGRKAIKIFEEM-IDHGFSPSHISFISVLGACSHTGLVEEGKKLF 401

Query: 167 CSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
            S++K  G +  V   A ++ +  R    + A K+ +D+ +      W +++ G C+
Sbjct: 402 ESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLL-GACR 457


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 427/763 (55%), Gaps = 29/763 (3%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHIS--YRNVYTWNSMISVYVRCGRLSEAVDC------- 132
           +  L+  YA  G L+ +   F  IS    +  ++NS+IS      R   A+         
Sbjct: 97  ANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAG 156

Query: 133 ---FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF--EWDVFVAASLLHM 187
                 FTL S LR   +  P    A R    G++ H   LK G       F   +LL M
Sbjct: 157 GHPLTSFTLVSVLRAVSH-LPAAAAAVRL---GREAHAFALKNGLLHGHQRFAFNALLSM 212

Query: 188 YCRFGLANVARKLFDD-MPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           Y R GL   A++LF    P R D  +WN M+S   QSG   EA+  L +M   GV  D +
Sbjct: 213 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           T AS LP C+R + +  G  +H Y++K   L  N FV++ L++MYA    +  A +VFD 
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 332

Query: 305 MME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDC 361
           + +  + +  WN++I  Y Q+     A   F  M+ +AG  P   T+ S+    A+    
Sbjct: 333 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 392

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
               +VHG++++RG    +  + NA++DMYA+LG  + A  +F  + + DV+SWNTLITG
Sbjct: 393 AGKEAVHGYVVKRG-MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451

Query: 422 YAQNGLASEAIEVFQMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
               G  ++A ++ + M++  E  + PN  T +++LP  + + A  +G +IH   +++ L
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV V + LVDMY KCG +  + ++F ++PR +++ WN +I  +G+HG G +A   F +
Sbjct: 512 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 540 MLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           M   G  RP+ +TF++ L ACSHSG+V  G + FH M+ + G++P      C+VD+ GRA
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 631

Query: 599 GHLGMAHNFIQNMPV-RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           G L  A+  + +M       S W  +LGACR+H N+ LG +A +RL E++ E   +YVL+
Sbjct: 632 GRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 691

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
            NIY+  G+W    EVRS  R RG+ K PG S IEV+  +  F  G   HP  E+++  +
Sbjct: 692 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHM 751

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L  +M + GY PD S VL D+++ +K  +L  HSE+LAIAFG++ + P + I++ KNL
Sbjct: 752 EALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNL 811

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCH   KF+S++  REI++RD  RFHHF++G CSCGDYW
Sbjct: 812 RVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 189/404 (46%), Gaps = 22/404 (5%)

Query: 249 SILPVCARSDNIL----SGLLIHLYIVKHGL--EFNLFVSNNLINMYAKFGMMRHALRVF 302
           S LP   +S   L    S   IH   ++ GL    +  V+N L+  YA+ G +  AL VF
Sbjct: 58  SALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVF 117

Query: 303 DQMME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
             + +   D VS+NS+I+A         A      M   G      TLVS+   V+ L  
Sbjct: 118 GSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPA 177

Query: 361 C----RNSRSVHGFIMRRGWFM-EDVIIGNAVVDMYAKLGIINSACAVFEG-LPVK-DVI 413
                R  R  H F ++ G          NA++ MYA+LG++  A  +F G  P + DV+
Sbjct: 178 AAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVV 237

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +WNT+++   Q+G+  EA++    M     + P+  T+ S LPA S +  L  G ++HA 
Sbjct: 238 TWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPACSRLELLDVGREMHAY 296

Query: 474 VIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV--PWNAIISCHGIHGQG 530
           VIK + L  + FVA+ LVDMY    ++  A  +F  VP S      WNA+I  +   G  
Sbjct: 297 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 356

Query: 531 DKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           ++AL  F +M  E G  P   T  S+L AC+ S   + G+   H    + G+  +     
Sbjct: 357 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA-GKEAVHGYVVKRGMAGNRFVQN 415

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            ++D++ R G   +A      + + PD   W  L+  C + G++
Sbjct: 416 ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHV 458



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V  G     F    L++ YA LG    +R  F  +   +V +WN++I+  V  G 
Sbjct: 398 VHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGH 457

Query: 126 LSEAVDCFYQFTL--TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           +++A     +       G+ P+  T   +L  C  L     GK+IH   ++   + DV V
Sbjct: 458 VADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAV 517

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+ MY + G   ++R +FD +P R++ +WN +I  Y   G   EA  + D M   G 
Sbjct: 518 GSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGE 577

Query: 241 SM-DPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +  + +T  + L  C+ S  +  GL L H     HG+E    +   ++++  + G +  A
Sbjct: 578 ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 637

Query: 299 LRVFDQMM--ERDVVSWNSIIAA 319
             +   M   E+ V +W++++ A
Sbjct: 638 YAMVTSMEAGEQQVSAWSTMLGA 660



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 30/298 (10%)

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAK 393
           TM     Q D   L       A L D R++R++H   +RRG        + NA++  YA+
Sbjct: 47  TMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYAR 106

Query: 394 LGIINSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-- 449
            G + +A  VF  +     D +S+N+LI+          A+ +F+  +            
Sbjct: 107 CGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAG 156

Query: 450 -------TYVSILPAYSHV----GALRQGIKIHARVIKNCLC--FDVFVATCLVDMYGKC 496
                  T VS+L A SH+     A+R G + HA  +KN L      F    L+ MY + 
Sbjct: 157 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 216

Query: 497 GRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           G + DA  LF      R   V WN ++S     G  D+A+     M+  GVRPD +TF S
Sbjct: 217 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 276

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            L ACS   L+  G+     + ++  +  +      +VD++     +G A      +P
Sbjct: 277 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVP 334



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 7/164 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V       V   + LV+ YA  G L+ SR  FD +  RN  TWN +I  Y   
Sbjct: 500 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 559

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG--KKIHCSVLKLGFEWDVF 179
           G   EA   F + T +   RP+  TF   L AC +  +VD   +  H      G E    
Sbjct: 560 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 619

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDS--GSWNAMISGYCQ 221
           + A ++ +  R G  + A  +   M   +    +W+ M+ G C+
Sbjct: 620 ILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML-GACR 662


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/671 (38%), Positives = 389/671 (57%), Gaps = 35/671 (5%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI-LDEMRLE-GV 240
           SLL    R GL     +LF  +P RD+ S+NA+++G+ ++G    A    +  +R E GV
Sbjct: 82  SLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGV 141

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
               IT++ ++ V +   +   G  +H  I++ G     F  + L++MYAK G +  A R
Sbjct: 142 RPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARR 201

Query: 301 VFDQMM-------------------------------ERDVVSWNSIIAAYEQSNDPITA 329
           VFD+M                                ERD ++W +++    Q+     A
Sbjct: 202 VFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEA 261

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M+  G+  D  T  S+ +    L      + +H +I R   + ++V +G+A+VD
Sbjct: 262 LDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT-CYEDNVFVGSALVD 320

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MY+K   +  A AVF  +  K++ISW  +I GY QNG   EA+ VF  M+  + I P+  
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQR-DGIKPDDF 379

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T  S++ + +++ +L +G + H   + + L   V V+  LV +YGKCG I+DA  LF ++
Sbjct: 380 TLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM 439

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
                V W A++  +   G+  + ++ F +ML +GV+PD +TF+ +L+ACS SGLV +G+
Sbjct: 440 SFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR 499

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            YFH MQ++  I P   HY CM+DL+ R+G L  A  FI+ MP  PDA  W  LL ACR+
Sbjct: 500 SYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRL 559

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
            G+ME+G  A++ L ++D +N   YVL+ +++A+ G+W  V ++R   RDR +KK PG S
Sbjct: 560 RGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCS 619

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
            I+  NKV IF   +++HP    IY++L+ L +KM   GY PD S VL DV + EK H+L
Sbjct: 620 WIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHML 679

Query: 750 TSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
           + HSE+LAIAFG+I  PP+ PI+I KNLRVC DCHN TKFIS+IT R+I+VRD+ RFH F
Sbjct: 680 SHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKF 739

Query: 810 KDGICSCGDYW 820
            +GICSCGD+W
Sbjct: 740 SNGICSCGDFW 750



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 232/515 (45%), Gaps = 76/515 (14%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF----------Y 134
           L+  YA+ G L  +R  FD +  RN+ T NS++S   R G + +    F          Y
Sbjct: 52  LLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSY 111

Query: 135 QFTLT----------------------SGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
              L                       +G+RP   T   V+     L D   G+++HC +
Sbjct: 112 NALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQI 171

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM------------------------- 204
           L+LGF    F  + L+ MY + G    AR++FD+M                         
Sbjct: 172 LRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEAR 231

Query: 205 ------PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
                   RDS +W  M++G  Q+G   EALD+   MR EGV +D  T  SIL  C    
Sbjct: 232 ALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALA 291

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  IH YI +   E N+FV + L++MY+K   +R A  VF +MM ++++SW ++I 
Sbjct: 292 ALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIV 351

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y Q+     A   F+ MQ+ GI+PD  TL S+ S  A L         H   +  G   
Sbjct: 352 GYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG-LR 410

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             V + NA+V +Y K G I  A  +F+ +   D +SW  L+ GYAQ G A E I++F+ M
Sbjct: 411 PYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKM 470

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYG 494
                + P+  T++ +L A S  G + +G      + ++    D+       TC++D+Y 
Sbjct: 471 LS-KGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQD---HDIVPLDDHYTCMIDLYS 526

Query: 495 KCGRIDDAMSLFYQVPR-SSSVPWNAIISCHGIHG 528
           + G +  A     Q+PR   +  W  ++S   + G
Sbjct: 527 RSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 200/409 (48%), Gaps = 68/409 (16%)

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ- 338
           ++ N L+  YA  G++ HA RVFD M  R++V+ NS+++A  ++         FT++ Q 
Sbjct: 47  YLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQR 106

Query: 339 --------------------------------AGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
                                           AG++P  +T+  +  + + L D    R 
Sbjct: 107 DAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQ 166

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLG------------------------------- 395
           VH  I+R G F      G+ +VDMYAK+G                               
Sbjct: 167 VHCQILRLG-FGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCK 225

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           ++  A A+FE +  +D I+W T++TG  QNGL SEA++VF+ M     +  +Q T+ SIL
Sbjct: 226 MVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM-RAEGVGIDQYTFGSIL 284

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A   + AL +G +IHA + + C   +VFV + LVDMY KC  +  A ++F ++   + +
Sbjct: 285 TACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNII 344

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A+I  +G +G G++A+  F +M  +G++PD  T  S++++C++   + EG + FH +
Sbjct: 345 SWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCL 403

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
               G++P++     +V L+G+ G +  AH     M      S W AL+
Sbjct: 404 ALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS-WTALV 451



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 203/449 (45%), Gaps = 48/449 (10%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H  ++  G     F+ + LV+ YA +G +  +R  FD +  +NV   N+MI+  +RC
Sbjct: 165 RQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRC 224

Query: 124 -------------------------------GRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
                                          G  SEA+D F +     G+  D YTF  +
Sbjct: 225 KMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR-AEGVGIDQYTFGSI 283

Query: 153 LKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L AC  L    +GK+IH  + +  +E +VFV ++L+ MY +     +A  +F  M  ++ 
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNI 343

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AMI GY Q+G   EA+ +  EM+ +G+  D  T+ S++  CA   ++  G   H  
Sbjct: 344 ISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 403

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            +  GL   + VSN L+ +Y K G +  A R+FD+M   D VSW +++  Y Q       
Sbjct: 404 ALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKET 463

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN---- 385
              F  M   G++PD +T + + S  ++       RS    + +      D++  +    
Sbjct: 464 IDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQD----HDIVPLDDHYT 519

Query: 386 AVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            ++D+Y++ G +  A    + +P   D   W TL++     G         + + + +  
Sbjct: 520 CMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQ 579

Query: 445 NPNQGTYVSILPA----YSHVGALRQGIK 469
           NP     +  + A    ++ V  LR+G++
Sbjct: 580 NPASYVLLCSMHASKGEWNDVAKLRRGMR 608



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 15/287 (5%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C     L   K++HA +  +     VF  + LV+ Y+    +  +   F  + 
Sbjct: 280 FGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMM 339

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
           ++N+ +W +MI  Y + G   EAV  F +     G++PD +T   V+ +C NL    +G 
Sbjct: 340 WKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ-RDGIKPDDFTLGSVISSCANLASLEEGA 398

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           + HC  L  G    V V+ +L+ +Y + G    A +LFD+M   D  SW A++ GY Q G
Sbjct: 399 QFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFG 458

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            A E +D+ ++M  +GV  D +T   +L  C+RS  +  G     Y      + ++   +
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG---RSYFHSMQQDHDIVPLD 515

Query: 284 N----LINMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSND 325
           +    +I++Y++ G ++ A     QM    D   W ++++A     D
Sbjct: 516 DHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGD 562



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 24/230 (10%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANL 92
           I PD       +     +  SC  L  ++   + H L +VSG    V  S  LV  Y   
Sbjct: 374 IKPD-------DFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKC 426

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G +  +   FD +S+ +  +W +++  Y + G+  E +D F +  L+ G++PD  TF  V
Sbjct: 427 GSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKM-LSKGVKPDGVTFIGV 485

Query: 153 LKAC--RNLVDGKKIHCSVLKLGFEWDVFVA----ASLLHMYCRFGLANVARKLFDDMP- 205
           L AC    LVD  + +   ++   + D+         ++ +Y R G    A +    MP 
Sbjct: 486 LSACSRSGLVDKGRSYFHSMQQ--DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPR 543

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
             D+  W  ++S  C+    +E      E  L+   +DP   AS + +C+
Sbjct: 544 CPDAFGWATLLSA-CRLRGDMEIGKWAAENLLK---LDPQNPASYVLLCS 589


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/709 (35%), Positives = 389/709 (54%), Gaps = 66/709 (9%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           + F   SLL MY + G    AR +F  MP RD+ SW  M+ G  ++G   +A+    +M 
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG--- 293
            EG++     + ++L  CA ++    G  +H +++K GL   + V+N+++ MY K G   
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215

Query: 294 ----------------------------MMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                                        M  AL +F+ M ER +VSWN+IIA Y Q+  
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275

Query: 326 PITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-------- 376
              A  FF+ M  A  ++PD  T+ S+ S  A L   +  + +H +I+R G         
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335

Query: 377 -----------------FMEDVIIGN-------AVVDMYAKLGIINSACAVFEGLPVKDV 412
                             M+  ++ +       A+++ Y KLG    A  VF+ +  +DV
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           I+W  +I GY QNG   EA+E+F+ M       PN  T  ++L A + +  L  G +IH 
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGP-EPNSHTLAAVLSACASLAYLGYGKQIHC 454

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           R I++     V V+  ++ +Y + G +  A  +F Q+  R  +V W ++I     HG G+
Sbjct: 455 RAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGE 514

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +ML  GV+PD +T++ + +AC+H+G + +G+RY+  M  E GI P + HY CM
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL  RAG L  AH FIQ MPV PD  +WG+LL ACR+  N +L  +A+++L  +D +N 
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y  ++N+Y+  G+W     +  L +D+ +KK  G+S   V +KV +F   +  HP+ +
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD 694

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            I  +   +  ++K  G+VPD + VL DV+++ KE +L+ HSE+LAIAFG+IS+P K+ +
Sbjct: 695 AICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 754

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLRVC DCH   KFIS++ +REIIVRD+ RFHHF+DG CSC DYW
Sbjct: 755 RIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 201/504 (39%), Gaps = 111/504 (22%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR----HALRVFD 303
           A +L +   + N  +G  IH + VK GL  + ++ NNL++ YA+ G+ R     A R+FD
Sbjct: 29  ARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFD 88

Query: 304 ---------------------------------QMMERDVVSWNSIIAAYEQSNDPITAH 330
                                            QM ERD VSW  ++    ++     A 
Sbjct: 89  DIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAV 148

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M   G+ P    L ++ S  A        R VH F+++ G     V + N+V+ M
Sbjct: 149 KTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLG-LSSCVPVANSVLYM 207

Query: 391 YAKLGIINSACAVFEGLPV-------------------------------KDVISWNTLI 419
           Y K G   +A AVFE + V                               + ++SWN +I
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY QNGL   A++ F  M   + + P++ T  S+L A +++  L+ G ++H+ +++  +
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGM 327

Query: 480 CFDVFVATCLVDMYGKCGRID---------------------------------DAMSLF 506
            +   +   L+  Y K G ++                                  A  +F
Sbjct: 328 PYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVF 387

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +     + W A+I  +  +GQ D+A+  FR M+  G  P+  T  ++L+AC+    + 
Sbjct: 388 DVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLG 447

Query: 567 EGQ----RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
            G+    R    +QE+      +     ++ ++ R+G + +A      +  R +   W +
Sbjct: 448 YGKQIHCRAIRSLQEQ-----SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTS 502

Query: 623 LLGACRIHGNMELGAVASDRLFEV 646
           ++ A   HG  E   V  + +  V
Sbjct: 503 MIVALAQHGLGEQAIVLFEEMLRV 526



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 20/219 (9%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +C  L ++   K++H   + S + ++V  S  ++  YA  G +  +R  FD I +R 
Sbjct: 436 VLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRK 495

Query: 110 -VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKI 165
              TW SMI    + G L E     ++  L  G++PD  T+  V  AC +   +D GK+ 
Sbjct: 496 ETVTWTSMIVALAQHG-LGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRY 554

Query: 166 HCSVL-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSG 223
           +  +L + G   ++   A ++ +  R GL   A +    MPV  D+  W ++++      
Sbjct: 555 YEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRK 614

Query: 224 NAVEALDILDEMRLEGVSMDP------ITVASILPVCAR 256
           NA    D+ +    + +S+DP        +A++   C R
Sbjct: 615 NA----DLAELAAEKLLSIDPDNSGAYSALANVYSACGR 649


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/774 (34%), Positives = 421/774 (54%), Gaps = 25/774 (3%)

Query: 66  LHALLVVSGKIKTVFS-----STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
           +H  L  +  IKT F+         +N Y+  G++  ++  FD +S R+V ++N +IS Y
Sbjct: 26  IHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGY 85

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD 177
              G   +A+  F +  +   L+ D +++  VL AC  + D   GK IH   +  G    
Sbjct: 86  GGMGFYHKAIGLFSEARMAC-LKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQ 144

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
           VF+   L+ MYC+    + AR LF+     D+ SWN++I+GY + G   E L +L +M  
Sbjct: 145 VFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHH 204

Query: 238 EGVSMDPITVASILPVCARS-DNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            G+ ++  T+ S L  C  + +N++S G  +H Y VK GL+ ++ V   L++MYAK G +
Sbjct: 205 TGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYL 264

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSND-----PITAHGFFTTMQQAGIQPDLLTLVS 350
             A+++F     ++VV +N++IA + Q+ D        A   F+ MQ+ GI+P   T  S
Sbjct: 265 GDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSS 324

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +  I   +      + +H  I +      D  IG+ ++++Y+ LG        F   P  
Sbjct: 325 IIKICNHIEAFEYGKQIHAHICKHN-IQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKL 383

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D++SW T+I GYAQNG    A+ +F  +    +  P++    ++L A + V A R G ++
Sbjct: 384 DIVSWTTMIAGYAQNGQFESALALFYELLASGK-KPDEFIITTMLSACADVAAERSGEQV 442

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H   +K  +     V    + MY K G +D A   F ++     V W+ +I  +  HG  
Sbjct: 443 HGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHA 502

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
             A+N F  M   G+ P+ ITF+ +LTACSH GLV EG RY+  M++++ +K ++KH  C
Sbjct: 503 KDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTC 562

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           +VDL  RAG L  A NFI N        +W  LL  CRI+ ++  G   +++L E+D + 
Sbjct: 563 IVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQE 622

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YVL+ NIY + G      ++R L +DRG++K PG S IEV N+V  F  G+ +HP  
Sbjct: 623 SSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMS 682

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILT----SHSERLAIAFGIISSP 766
           + IY +L  +  K + +GY+  K   +Q+V    KE   T     HSE+LA++FGI+S P
Sbjct: 683 QIIYKKLEGMLEKKRKIGYIDQK---IQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLP 739

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P +P+++ KNLRVC DCH   K IS + +REII+RDS RFHHFK+G CSC DYW
Sbjct: 740 PSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 9/327 (2%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           +D +    ++   ++S + + G L H +++K      LF+ NN +N+Y+K+G M +A ++
Sbjct: 7   LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M ER V+S+N +I+ Y        A G F+  + A ++ D  +   + S   Q+ D 
Sbjct: 67  FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              + +HG  +  G   + V + N ++DMY K   I+ A  +FE     D +SWN+LITG
Sbjct: 127 ALGKVIHGLAIVCG-LGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITG 185

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA-YSHVGAL-RQGIKIHARVIKNCL 479
           YA+ G   E +++   M     +  N  T  S L + Y ++  +   G  +H   +K  L
Sbjct: 186 YARVGAYEEMLKLLVKMHHTG-LRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGL 244

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK-----AL 534
             D+ V T L+DMY K G + DA+ LF   P  + V +NA+I+        DK     AL
Sbjct: 245 DLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEAL 304

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSH 561
             F QM  +G++P   TF S++  C+H
Sbjct: 305 KLFSQMQRQGIKPSDFTFSSIIKICNH 331


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 427/763 (55%), Gaps = 29/763 (3%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHIS--YRNVYTWNSMISVYVRCGRLSEAVDC------- 132
           +  L+  YA  G L+ +   F  IS    +  ++NS+IS      R   A+         
Sbjct: 99  ANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAG 158

Query: 133 ---FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF--EWDVFVAASLLHM 187
                 FTL S LR   +  P    A R    G++ H   LK G       F   +LL M
Sbjct: 159 GHPLTSFTLVSVLRAVSH-LPAAAAAVRL---GREAHAFALKNGLLHGHQRFAFNALLSM 214

Query: 188 YCRFGLANVARKLFDD-MPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           Y R GL   A++LF    P R D  +WN M+S   QSG   EA+  L +M   GV  D +
Sbjct: 215 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 274

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           T AS LP C+R + +  G  +H Y++K   L  N FV++ L++MYA    +  A +VFD 
Sbjct: 275 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 334

Query: 305 MME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDC 361
           + +  + +  WN++I  Y Q+     A   F  M+ +AG  P   T+ S+    A+    
Sbjct: 335 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 394

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
               +VHG++++RG    +  + NA++DMYA+LG  + A  +F  + + DV+SWNTLITG
Sbjct: 395 AGKEAVHGYVVKRG-MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 453

Query: 422 YAQNGLASEAIEVFQMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
               G  ++A ++ + M++  E  + PN  T +++LP  + + A  +G +IH   +++ L
Sbjct: 454 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 513

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV V + LVDMY KCG +  + ++F ++PR +++ WN +I  +G+HG G +A   F +
Sbjct: 514 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 573

Query: 540 MLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           M   G  RP+ +TF++ L ACSHSG+V  G + FH M+ + G++P      C+VD+ GRA
Sbjct: 574 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 633

Query: 599 GHLGMAHNFIQNMPV-RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           G L  A+  + +M       S W  +LGACR+H N+ LG +A +RL E++ E   +YVL+
Sbjct: 634 GRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 693

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
            NIY+  G+W    EVRS  R RG+ K PG S IEV+  +  F  G   HP  E+++  +
Sbjct: 694 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHM 753

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L  +M + GY PD S VL D+++ +K  +L  HSE+LAIAFG++ + P + I++ KNL
Sbjct: 754 EALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNL 813

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCH   KF+S++  REI++RD  RFHHF++G CSCGDYW
Sbjct: 814 RVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 189/404 (46%), Gaps = 22/404 (5%)

Query: 249 SILPVCARSDNIL----SGLLIHLYIVKHGL--EFNLFVSNNLINMYAKFGMMRHALRVF 302
           S LP   +S   L    S   IH   ++ GL    +  V+N L+  YA+ G +  AL VF
Sbjct: 60  SALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVF 119

Query: 303 DQMME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
             + +   D VS+NS+I+A         A      M   G      TLVS+   V+ L  
Sbjct: 120 GSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPA 179

Query: 361 C----RNSRSVHGFIMRRGWFM-EDVIIGNAVVDMYAKLGIINSACAVFEG-LPVK-DVI 413
                R  R  H F ++ G          NA++ MYA+LG++  A  +F G  P + DV+
Sbjct: 180 AAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVV 239

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +WNT+++   Q+G+  EA++    M     + P+  T+ S LPA S +  L  G ++HA 
Sbjct: 240 TWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPACSRLELLDVGREMHAY 298

Query: 474 VIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV--PWNAIISCHGIHGQG 530
           VIK + L  + FVA+ LVDMY    ++  A  +F  VP S      WNA+I  +   G  
Sbjct: 299 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 358

Query: 531 DKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           ++AL  F +M  E G  P   T  S+L AC+ S   + G+   H    + G+  +     
Sbjct: 359 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA-GKEAVHGYVVKRGMAGNRFVQN 417

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            ++D++ R G   +A      + + PD   W  L+  C + G++
Sbjct: 418 ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHV 460



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V  G     F    L++ YA LG    +R  F  +   +V +WN++I+  V  G 
Sbjct: 400 VHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGH 459

Query: 126 LSEAVDCFYQFTL--TSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
           +++A     +       G+ P+  T   +L  C  L     GK+IH   ++   + DV V
Sbjct: 460 VADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAV 519

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+ MY + G   ++R +FD +P R++ +WN +I  Y   G   EA  + D M   G 
Sbjct: 520 GSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGE 579

Query: 241 SM-DPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +  + +T  + L  C+ S  +  GL L H     HG+E    +   ++++  + G +  A
Sbjct: 580 ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 639

Query: 299 LRVFDQMM--ERDVVSWNSIIAA 319
             +   M   E+ V +W++++ A
Sbjct: 640 YAMVTSMETGEQQVSAWSTMLGA 662



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 30/298 (10%)

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAK 393
           TM     Q D   L       A L D R++R++H   +RRG        + NA++  YA+
Sbjct: 49  TMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYAR 108

Query: 394 LGIINSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-- 449
            G + +A  VF  +     D +S+N+LI+          A+ +F+  +            
Sbjct: 109 CGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAG 158

Query: 450 -------TYVSILPAYSHV----GALRQGIKIHARVIKNCLC--FDVFVATCLVDMYGKC 496
                  T VS+L A SH+     A+R G + HA  +KN L      F    L+ MY + 
Sbjct: 159 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 218

Query: 497 GRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           G + DA  LF      R   V WN ++S     G  D+A+     M+  GVRPD +TF S
Sbjct: 219 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 278

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            L ACS   L+  G+     + ++  +  +      +VD++     +G A      +P
Sbjct: 279 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVP 336



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 7/164 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V       V   + LV+ YA  G L+ SR  FD +  RN  TWN +I  Y   
Sbjct: 502 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 561

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG--KKIHCSVLKLGFEWDVF 179
           G   EA   F + T +   RP+  TF   L AC +  +VD   +  H      G E    
Sbjct: 562 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 621

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDS--GSWNAMISGYCQ 221
           + A ++ +  R G  + A  +   M   +    +W+ M+ G C+
Sbjct: 622 ILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML-GACR 664


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 427/763 (55%), Gaps = 29/763 (3%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHIS--YRNVYTWNSMISVYVRCGRLSEAVDC------- 132
           +  L+  YA  G L+ +   F  IS    +  ++NS+IS      R   A+         
Sbjct: 97  ANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAG 156

Query: 133 ---FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF--EWDVFVAASLLHM 187
                 FTL S LR   +  P    A R    G++ H   LK G       F   +LL M
Sbjct: 157 GHPLTSFTLVSVLRAVSH-LPAAAAAVRL---GREAHAFALKNGLLHGHQRFAFNALLSM 212

Query: 188 YCRFGLANVARKLFDD-MPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           Y R GL   A++LF    P R D  +WN M+S   QSG   EA+  L +M   GV  D +
Sbjct: 213 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           T AS LP C+R + +  G  +H Y++K   L  N FV++ L++MYA    +  A +VFD 
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 332

Query: 305 MME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDC 361
           + +  + +  WN++I  Y Q+     A   F  M+ +AG  P   T+ S+    A+    
Sbjct: 333 VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF 392

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
               +VHG++++RG    +  + NA++DMYA+LG  + A  +F  + + DV+SWNTLITG
Sbjct: 393 AGKEAVHGYVVKRG-MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451

Query: 422 YAQNGLASEAIEVFQMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
               G  ++A ++ + M++  E  + PN  T +++LP  + + A  +G +IH   +++ L
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV V + LVDMY KCG +  + ++F ++PR +++ WN +I  +G+HG G +A   F +
Sbjct: 512 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 571

Query: 540 MLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           M   G  RP+ +TF++ L ACSHSG+V  G + FH M+ + G++P      C+VD+ GRA
Sbjct: 572 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 631

Query: 599 GHLGMAHNFIQNMPV-RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           G L  A+  + +M       S W  +LGACR+H N+ LG +A +RL E++ E   +YVL+
Sbjct: 632 GRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLL 691

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
            NIY+  G+W    EVRS  R RG+ K PG S IEV+  +  F  G   HP  E+++  +
Sbjct: 692 CNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHM 751

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             L  +M + GY PD S VL D+++ +K  +L  HSE+LAIAFG++ + P + I++ KNL
Sbjct: 752 EALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNL 811

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCH   KF+S++  REI++RD  RFHHF++G CSCGDYW
Sbjct: 812 RVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 189/404 (46%), Gaps = 22/404 (5%)

Query: 249 SILPVCARSDNIL----SGLLIHLYIVKHGL--EFNLFVSNNLINMYAKFGMMRHALRVF 302
           S LP   +S   L    S   IH   ++ GL    +  V+N L+  YA+ G +  AL VF
Sbjct: 58  SALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVF 117

Query: 303 DQMME--RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
             + +   D VS+NS+I+A         A      M   G      TLVS+   V+ L  
Sbjct: 118 GSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPA 177

Query: 361 C----RNSRSVHGFIMRRGWFM-EDVIIGNAVVDMYAKLGIINSACAVFEG-LPVK-DVI 413
                R  R  H F ++ G          NA++ MYA+LG++  A  +F G  P + DV+
Sbjct: 178 AAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVV 237

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +WNT+++   Q+G+  EA++    M     + P+  T+ S LPA S +  L  G ++HA 
Sbjct: 238 TWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDGVTFASALPACSRLELLDVGREMHAY 296

Query: 474 VIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV--PWNAIISCHGIHGQG 530
           VIK + L  + FVA+ LVDMY    ++  A  +F  VP S      WNA+I  +   G  
Sbjct: 297 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 356

Query: 531 DKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           ++AL  F +M  E G  P   T  S+L AC+ S   + G+   H    + G+  +     
Sbjct: 357 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFA-GKEAVHGYVVKRGMAGNRFVQN 415

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            ++D++ R G   +A      + + PD   W  L+  C + G++
Sbjct: 416 ALMDMYARLGKTDVARRIFAMVDL-PDVVSWNTLITGCVVQGHV 458



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V  G     F    L++ YA LG    +R  F  +   +V +WN++I+  V  G 
Sbjct: 398 VHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGH 457

Query: 126 LSEAVDCFYQFTL--TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           +++A     +       G+ P+  T   +L  C  L     GK+IH   ++   + DV V
Sbjct: 458 VADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAV 517

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+ MY + G   ++R +FD +P R++ +WN +I  Y   G   EA  + D M   G 
Sbjct: 518 GSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGE 577

Query: 241 SM-DPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +  + +T  + L  C+ S  +  GL L H     HG+E    +   ++++  + G +  A
Sbjct: 578 ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 637

Query: 299 LRVFDQMM--ERDVVSWNSIIAA 319
             +   M   E+ V +W++++ A
Sbjct: 638 YAMVTSMETGEQQVSAWSTMLGA 660



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 30/298 (10%)

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAK 393
           TM     Q D   L       A L D R++R++H   +RRG        + NA++  YA+
Sbjct: 47  TMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYAR 106

Query: 394 LGIINSACAVFEGL--PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-- 449
            G + +A  VF  +     D +S+N+LI+          A+ +F+  +            
Sbjct: 107 CGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRAMLAG 156

Query: 450 -------TYVSILPAYSHV----GALRQGIKIHARVIKNCLC--FDVFVATCLVDMYGKC 496
                  T VS+L A SH+     A+R G + HA  +KN L      F    L+ MY + 
Sbjct: 157 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 216

Query: 497 GRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           G + DA  LF      R   V WN ++S     G  D+A+     M+  GVRPD +TF S
Sbjct: 217 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 276

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            L ACS   L+  G+     + ++  +  +      +VD++     +G A      +P
Sbjct: 277 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVP 334



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 7/164 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V       V   + LV+ YA  G L+ SR  FD +  RN  TWN +I  Y   
Sbjct: 500 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 559

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG--KKIHCSVLKLGFEWDVF 179
           G   EA   F + T +   RP+  TF   L AC +  +VD   +  H      G E    
Sbjct: 560 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 619

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDS--GSWNAMISGYCQ 221
           + A ++ +  R G  + A  +   M   +    +W+ M+ G C+
Sbjct: 620 ILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML-GACR 662


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/659 (37%), Positives = 378/659 (57%), Gaps = 37/659 (5%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A++LFD++P  D  + + +IS +   G   EA+ +   +R  G+        ++   C  
Sbjct: 85  AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGA 144

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S +      +H   ++ G+  + F+ N LI+ Y K   +  A RVFD ++ +DVVSW S+
Sbjct: 145 SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSM 204

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
            + Y     P      F  M   G++P+ +TL S+    ++L D ++ R++HGF +R G 
Sbjct: 205 SSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHG- 263

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY-------------- 422
            +E+V + +A+V +YA+   +  A  VF+ +P +DV+SWN ++T Y              
Sbjct: 264 MIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFS 323

Query: 423 ---------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
                                 +NG   +A+E+ + M+      PNQ T  S LPA S +
Sbjct: 324 QMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLG-FKPNQITISSFLPACSIL 382

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +LR G ++H  V ++ L  D+   T LV MY KCG ++ + ++F  + R   V WN +I
Sbjct: 383 ESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMI 442

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
             + +HG G + L  F  ML  G++P+ +TF  +L+ CSHS LV EG + F+ M  +  +
Sbjct: 443 IANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLV 502

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P   HY CMVD+F RAG L  A+ FIQ MP+ P AS WGALLGACR++ N+EL  ++++
Sbjct: 503 EPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISAN 562

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           +LFE++  N G YV + NI      W    E R L ++RG+ KTPG S ++V ++V  F 
Sbjct: 563 KLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFV 622

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G++ + + +KIY+ L  L  KMKS GY PD  +VLQD++++EK   L SHSE+LA+AFG
Sbjct: 623 VGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFG 682

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I++   +S I++FKNLR+CGDCHN  K++S++    IIVRDS RFHHF++G CSC D W
Sbjct: 683 ILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 257/535 (48%), Gaps = 46/535 (8%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           +L+    N+GD   ++  FD+I   +  T +++IS +   G  +EA+   Y      G++
Sbjct: 71  RLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIR-LYASLRARGIK 129

Query: 144 PDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P    F  V KAC    D    K++H   ++ G   D F+  +L+H Y +      AR++
Sbjct: 130 PHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRV 189

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FDD+ V+D  SW +M S Y   G     L +  EM   GV  + +T++SILP C+   ++
Sbjct: 190 FDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDL 249

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
            SG  IH + V+HG+  N+FV + L+++YA+   ++ A  VFD M  RDVVSWN ++ AY
Sbjct: 250 KSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAY 309

Query: 321 EQSNDPITAHGFFT-----------------------------------TMQQAGIQPDL 345
             + +       F+                                    MQ  G +P+ 
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQ 369

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T+ S     + L   R  + VH ++ R  W + D+    A+V MYAK G +N +  VF+
Sbjct: 370 ITISSFLPACSILESLRMGKEVHCYVFRH-WLIGDLTTMTALVYMYAKCGDLNLSRNVFD 428

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  KDV++WNT+I   A +G   E + +F+ M + + I PN  T+  +L   SH   + 
Sbjct: 429 MICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQ-SGIKPNSVTFTGVLSGCSHSRLVE 487

Query: 466 QGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC 523
           +G++I   + ++ L   D     C+VD++ + GR+ +A     ++P   ++  W A++  
Sbjct: 488 EGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGA 547

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQE 577
             ++   + A     ++ +  + P++   +VSL      + L SE      +M+E
Sbjct: 548 CRVYKNVELAKISANKLFE--IEPNNPGNYVSLFNILVTAKLWSEASEARILMKE 600



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 202/466 (43%), Gaps = 45/466 (9%)

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+      G  R A ++FD + + D  + +++I+A+     P  A   + +++  GI+P 
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
               +++        D    + VH   +R G  M D  +GNA++  Y K   +  A  VF
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCG-MMSDAFLGNALIHAYGKCKCVEGARRVF 190

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + L VKDV+SW ++ + Y   GL    + VF  M   N + PN  T  SILPA S +  L
Sbjct: 191 DDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM-GWNGVKPNSVTLSSILPACSELKDL 249

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           + G  IH   +++ +  +VFV + LV +Y +C  +  A  +F  +P    V WN +++ +
Sbjct: 250 KSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAY 309

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             + + DK L  F QM  +GV  D  T+ +++  C  +G   +       MQ   G KP+
Sbjct: 310 FTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQ-NLGFKPN 368

Query: 585 ---------------------------LKHY--------GCMVDLFGRAGHLGMAHNFIQ 609
                                       +H+          +V ++ + G L ++ N + 
Sbjct: 369 QITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRN-VF 427

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKW 667
           +M  R D   W  ++ A  +HGN     +  + + +  +   +V +  ++S    +    
Sbjct: 428 DMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVE 487

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           EG+    S+ RD  ++      +      VD+F    R H  YE I
Sbjct: 488 EGLQIFNSMGRDHLVEPDANHYAC----MVDVFSRAGRLHEAYEFI 529



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 206/445 (46%), Gaps = 68/445 (15%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           VK +H   +  G +   F    L++ Y     +  +R  FD +  ++V +W SM S YV 
Sbjct: 151 VKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVN 210

Query: 123 CG--RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD 177
           CG  RL  AV C   +   +G++P+  T   +L AC  L D   G+ IH   ++ G   +
Sbjct: 211 CGLPRLGLAVFCEMGW---NGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIEN 267

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDS---------------------------- 209
           VFV ++L+ +Y R      AR +FD MP RD                             
Sbjct: 268 VFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSS 327

Query: 210 -------GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
                   +WNA+I G  ++G   +A+++L +M+  G   + IT++S LP C+  +++  
Sbjct: 328 KGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRM 387

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G  +H Y+ +H L  +L     L+ MYAK G +  +  VFD +  +DVV+WN++I A   
Sbjct: 388 GKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAM 447

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWF 377
             +       F +M Q+GI+P+ +T   +      L+ C +SR V   +     M R   
Sbjct: 448 HGNGREVLLLFESMLQSGIKPNSVTFTGV------LSGCSHSRLVEEGLQIFNSMGRDHL 501

Query: 378 ME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLAS-EA 431
           +E D      +VD++++ G ++ A    + +P++   S W  L+     Y    LA   A
Sbjct: 502 VEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISA 561

Query: 432 IEVFQMMEECNEINPNQ-GTYVSIL 455
            ++F       EI PN  G YVS+ 
Sbjct: 562 NKLF-------EIEPNNPGNYVSLF 579



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 10/193 (5%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I       +C+ L  +   K +H  +     I  + + T LV  YA  GDL+ SR+ FD
Sbjct: 369 QITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFD 428

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLV 160
            I  ++V  WN+MI      G   E +   ++  L SG++P+  TF  VL  C   R + 
Sbjct: 429 MICRKDVVAWNTMIIANAMHGNGREVL-LLFESMLQSGIKPNSVTFTGVLSGCSHSRLVE 487

Query: 161 DGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISG 218
           +G +I  S+ +    E D    A ++ ++ R G  + A +    MP+  + S W A++ G
Sbjct: 488 EGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL-G 546

Query: 219 YCQSGNAVEALDI 231
            C+    VE   I
Sbjct: 547 ACRVYKNVELAKI 559


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/778 (32%), Positives = 422/778 (54%), Gaps = 16/778 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
            +SC+   H   +HA +V +    ++F    L+  Y  LG    +R   D +   N  ++
Sbjct: 24  LRSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSF 81

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL 170
           N +I  Y R G+   +++ F +   ++G+R D +T+   L AC     L +GK +H   +
Sbjct: 82  NLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSV 141

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
             G    VFV+ SL+ MY R G    AR++FD    RD  SWNA++SGY ++G   + L 
Sbjct: 142 LEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLR 201

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNLINM 288
           +   MR  G+ ++   + S++  CA SD+ +  +   +H  +VK G + ++F+++ ++ M
Sbjct: 202 VFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGM 261

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI------TAHGFFTTMQQAGIQ 342
           YAK G +  A+ +F  +++ +VV +N++IA   +    +       A   ++ +Q  G++
Sbjct: 262 YAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGME 321

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P   T  S+        D    + +HG +++   F  D  IG+A++D+Y   G +     
Sbjct: 322 PTEFTFSSVIRACNLAGDIEFGKQIHGQVLKH-CFQGDDFIGSALIDLYLNSGCMEDGFR 380

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F  +P +DV++W  +I+G  QN L   A+ +F  +     + P+  T  S++ A + + 
Sbjct: 381 CFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAG-LKPDPFTISSVMNACASLA 439

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
             R G +I     K+       +    + MY + G +  A+  F ++     V W+A+IS
Sbjct: 440 VARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVIS 499

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            H  HG    AL FF +M+D  V P+ ITF+ +LTACSH GLV EG +Y+  M+EE+ + 
Sbjct: 500 SHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALS 559

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P +KH  C+VDL GRAG L  A  FI++     +  IW +LL +CRIH +ME G + +DR
Sbjct: 560 PTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADR 619

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + E+   +   YV + NIY + G+     ++R + ++RG+KK PG S IE+ + V  F  
Sbjct: 620 IMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVA 679

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+++HP+   IY +L  + +K+  L      S    D   +E+   +  HSE+LA+A G+
Sbjct: 680 GDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQS-WMNWHSEKLAVALGL 738

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  P  +PI++ KNLRVC DCH   K IS+  +REI++RD+ RFHHF+DG CSC DYW
Sbjct: 739 IHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 232/591 (39%), Positives = 359/591 (60%), Gaps = 3/591 (0%)

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D LD +    ++  P    S++  CAR  ++     IH ++       ++F+ N+LI++Y
Sbjct: 50  DTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLY 109

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G +  A RVFD M  RD+ SW S+IA Y Q++ P  A G    M +   +P+  T  
Sbjct: 110 CKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFA 169

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL               +H   ++  W  +DV +G+A++DMYA+ G ++ A AVF+ L  
Sbjct: 170 SLLKAAGASASSGIGEQIHALTVKYDWH-DDVYVGSALLDMYARCGRMDMAIAVFDQLES 228

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K+ +SWN LI G+A+ G     + +F  M+  N       TY S+  A + +GAL QG  
Sbjct: 229 KNGVSWNALIAGFARKGDGETTLLMFAEMQR-NGFEATHFTYSSVFSAIAGIGALEQGKW 287

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +HA +IK+      FV   ++DMY K G + DA  +F +V +   V WN++++    +G 
Sbjct: 288 VHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGL 347

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +A+  F +M   GV  + ITF+S+LTACSH GLV EG++YF MM+E + ++P + HY 
Sbjct: 348 GREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYV 406

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            +VDL GRAG L  A  FI  MP++P A++WGALLG+CR+H N ++G  A+D +FE+D +
Sbjct: 407 TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPD 466

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + G  VL+ NIYA+ G+W+    VR + +  G+KK P  S +E+ N V +F   + THP+
Sbjct: 467 DTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPR 526

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            E+IY +   ++ +++  GYVP+  +VL  V+E E++  L  HSE++A+AF +I+ P  +
Sbjct: 527 SEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGA 586

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I+I KN+R+CGDCH+  ++IS++ +REI+VRD+NRFHHF  G CSCGDYW
Sbjct: 587 TIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 211/380 (55%), Gaps = 6/380 (1%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           ++ AC   R+L D + IH  +    F   VF+  SL+H+YC+ G    AR++FD MP RD
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW ++I+GY Q+    EAL +L  M       +  T AS+L     S +   G  IH 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             VK+    +++V + L++MYA+ G M  A+ VFDQ+  ++ VSWN++IA + +  D  T
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
               F  MQ+ G +    T  S+ S +A +      + VH  +++ G  +    +GN ++
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLS-AFVGNTIL 308

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G +  A  VF+ +  KDV++WN+++T +AQ GL  EA+  F+ M +C  ++ NQ
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCG-VHLNQ 367

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T++SIL A SH G +++G +    + +  L  ++     +VD+ G+ G ++DA+   ++
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 509 VP-RSSSVPWNAIISCHGIH 527
           +P + ++  W A++    +H
Sbjct: 428 MPMKPTAAVWGALLGSCRMH 447



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 202/404 (50%), Gaps = 17/404 (4%)

Query: 30  AANSLQISPDCLEN-ESREID-----FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVF 80
           AA S  I  D L++ ++RE+      +  L  +C +   L   + +HA L  S    +VF
Sbjct: 41  AAASTGIIRDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVF 100

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
               L++ Y   G ++ +R  FD +  R++ +W S+I+ Y +     EA+       L  
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM-LRG 159

Query: 141 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
             +P+ +TF  +LKA         G++IH   +K  +  DV+V ++LL MY R G  ++A
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
             +FD +  ++  SWNA+I+G+ + G+    L +  EM+  G      T +S+    A  
Sbjct: 220 IAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGI 279

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  +H +++K G   + FV N +++MYAK G M  A +VFD++ ++DVV+WNS++
Sbjct: 280 GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSML 339

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            A+ Q      A   F  M++ G+  + +T +S+ +  +     +  +    F M + + 
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQY--FDMMKEYN 397

Query: 378 MEDVIIGN-AVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
           +E  I     VVD+  + G++N A      +P+K   + W  L+
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +HA ++ SG+  + F    +++ YA  G +  +R  FD +  ++V TWNSM++ 
Sbjct: 282 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA 341

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW 176
           + + G   EAV  F +     G+  +  TF  +L AC +   + +GK+    + +   E 
Sbjct: 342 FAQYGLGREAVTHFEEMR-KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEP 400

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
           ++    +++ +  R GL N A      MP++ + + W A++ G C+
Sbjct: 401 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCR 445


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/765 (34%), Positives = 425/765 (55%), Gaps = 76/765 (9%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLG--DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           ++++G I+  +++++L+ F  +     + ++R  F+ I   N + WN MI  Y++     
Sbjct: 1   MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASL 184
            A    Y+  L++ L  D YT+P +++AC   R+  + K++H  VLKLGF+ DV+V  +L
Sbjct: 61  FAFT-LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTL 119

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           ++ +        A ++F++  V DS SWN++++GY + GN  EA  I  +M         
Sbjct: 120 INCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP-------- 171

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
                                          E ++  SN++I ++   G++  A ++FD+
Sbjct: 172 -------------------------------ERSIIASNSMIVLFGMRGLVVEACKLFDE 200

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M+E+D+V+W+++IA ++Q+     A   F  M + G+  D +  VS  S  A L      
Sbjct: 201 MLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMG 260

Query: 365 RSVHGFIMRRGW------------------------------FMEDVIIGNAVVDMYAKL 394
           + +H   ++ G                               ++ D+I  N+++  Y K 
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 320

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
            ++++A A+F+ +P KDV+SW+++I+GYAQN L  E + +FQ M+  +   P++ T VS+
Sbjct: 321 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ-MSGFKPDETTLVSV 379

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           + A + + AL QG  +HA + +N L  +V + T L+DMY KCG ++ A+ +FY +     
Sbjct: 380 ISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGI 439

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
             WNA+I    ++G  + +L+ F  M    V P+ ITF+ +L AC H GLV EGQ +F+ 
Sbjct: 440 STWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYS 499

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M  +  I+P++KHYGCMVDL GRAG L  A   +  MP+ PD + WGALLGAC+ HG+ E
Sbjct: 500 MIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSE 559

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G     +L E+  ++ G++VL+SNIYA+ GKW+ V E+R +     + K PG S IE N
Sbjct: 560 MGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEAN 619

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
             +  F  G++THP  + I D L  +  K+K  GY PD + VL DV+E+EKE  L  HSE
Sbjct: 620 GVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSE 679

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           +LAIAFG+I+  P +PI+I KNLR+C DCH   K IS+   R+I+
Sbjct: 680 KLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 39/317 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H+L +  G    +     L+  Y+  GD+  +R  FD     ++ +WNSMIS Y++C
Sbjct: 261 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 320

Query: 124 GRLSEAVDCF------------------------------YQFTLTSGLRPDFYTFPPVL 153
             +  A   F                              +Q    SG +PD  T   V+
Sbjct: 321 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 380

Query: 154 KACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
            AC  L     GK +H  + + G   +V +  +L+ MY + G    A ++F  M  +   
Sbjct: 381 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 440

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY- 269
           +WNA+I G   +G    +LD+   M+   V+ + IT   +L  C R   ++     H Y 
Sbjct: 441 TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC-RHMGLVDEGQHHFYS 499

Query: 270 -IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPI 327
            I  H ++ N+     ++++  + G ++ A  + ++M M  DV +W +++ A ++  D  
Sbjct: 500 MIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGD-- 557

Query: 328 TAHGFFTTMQQAGIQPD 344
           +  G     +   +QPD
Sbjct: 558 SEMGRRVGRKLIELQPD 574



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     +  +C +L  +   K +HA +  +G    V   T L++ Y   G +  +   F 
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 432

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD 161
            +  + + TWN++I      G +  ++D F        + P+  TF  VL ACR+  LVD
Sbjct: 433 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMK-KCHVTPNEITFMGVLGACRHMGLVD 491

Query: 162 GKKIH--CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
             + H    +     + +V     ++ +  R G    A +L + MP+  D  +W A++  
Sbjct: 492 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 551

Query: 219 YCQSGNA 225
             + G++
Sbjct: 552 CKKHGDS 558


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/636 (39%), Positives = 372/636 (58%), Gaps = 26/636 (4%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S +W  +I  Y   G    +L   + +R  G+S D     S+L       +      +H 
Sbjct: 41  SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100

Query: 269 YIVKHGLEFNLFVSNNLINMYAKF----------GMMRH------------ALRVFDQMM 306
            +++ G  F+L+ +N L+NMY+KF             RH              ++FD+M 
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMP 160

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            RDVVSWN++IA   Q+     A      M +  ++PD  TL S+  I  +  +    + 
Sbjct: 161 VRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKE 220

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG+ +R G F +DV IG++++DMYAK   +  +   F  L  +D ISWN++I G  QNG
Sbjct: 221 IHGYAIRHG-FDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              + +  F+ M +  ++ P Q ++ S++PA +H+ AL  G ++HA +I+     + F+A
Sbjct: 280 RFDQGLGFFRRMLK-EKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSS--VPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           + L+DMY KCG I  A  +F ++       V W AII    +HG    A++ F +ML +G
Sbjct: 339 SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDG 398

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           V+P ++ F+++LTACSH+GLV EG +YF+ MQ +FG+ P L+HY  + DL GRAG L  A
Sbjct: 399 VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
           ++FI NM   P  S+W  LL ACR H N+EL     +++  VD  N+G +V+MSNIY+  
Sbjct: 459 YDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAA 518

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
            +W    ++R   R  GLKKTP  S IEV NKV  F  G+++HP Y+KI + L  L  +M
Sbjct: 519 QRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQM 578

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           +  GYV D + VL DV+E+ K  +L +HSERLAIAFGIIS+   + I++ KN+RVC DCH
Sbjct: 579 EKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCH 638

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              KF+++I  REIIVRD++RFHHFK+G CSCGDYW
Sbjct: 639 TAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 242/483 (50%), Gaps = 44/483 (9%)

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCS 168
            W  +I  Y   G L  ++  F     + G+ PD + FP +L+A    ++    + +H +
Sbjct: 43  AWICIIKCYASHGLLRHSLASF-NLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 169 VLKLGFEWDVFVAASLLHMYCRFG----------------------LANVARKLFDDMPV 206
           V++LGF +D++ A +L++MY +F                         +  RKLFD MPV
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           RD  SWN +I+G  Q+G   EAL+++ EM  E +  D  T++SILP+     N+  G  I
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H Y ++HG + ++F+ ++LI+MYAK   +  ++  F  +  RD +SWNSIIA   Q+   
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
               GFF  M +  ++P  ++  S+    A L      + +H +I+R G F ++  I ++
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLG-FDDNKFIASS 340

Query: 387 VVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           ++DMYAK G I  A  +F  + +  +D++SW  +I G A +G A +A+ +F+ M   + +
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEM-LVDGV 399

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGR 498
            P    ++++L A SH G + +G K       N +  D  VA        + D+ G+ GR
Sbjct: 400 KPCYVAFMAVLTACSHAGLVDEGWKYF-----NSMQRDFGVAPGLEHYAAVADLLGRAGR 454

Query: 499 IDDAMSLFYQV-PRSSSVPWNAIISCHGIHGQGDKALNFFRQML--DEGVRPDHITFVSL 555
           +++A      +    +   W+ +++    H   + A     ++L  D G    H+   ++
Sbjct: 455 LEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNI 514

Query: 556 LTA 558
            +A
Sbjct: 515 YSA 517



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 22/196 (11%)

Query: 47  EIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           ++ F  +  +C   T L+  K+LHA ++  G     F ++ L++ YA  G++  +R+ F+
Sbjct: 300 QVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFN 359

Query: 104 HISY--RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--L 159
            I    R++ +W ++I      G   +AV  F +  L  G++P +  F  VL AC +  L
Sbjct: 360 KIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEM-LVDGVKPCYVAFMAVLTACSHAGL 418

Query: 160 VD-GKKIHCSVLKLGFEWDVFVAASLLH------MYCRFGLANVARKLFDDMPVRDSGS- 211
           VD G K   S+ +     D  VA  L H      +  R G    A     +M    +GS 
Sbjct: 419 VDEGWKYFNSMQR-----DFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSV 473

Query: 212 WNAMISGYCQSGNAVE 227
           W+ +++  C++   +E
Sbjct: 474 WSTLLAA-CRAHKNIE 488


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/593 (40%), Positives = 361/593 (60%), Gaps = 5/593 (0%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +LD +    +  +    + +L  C     +  G  IH +I     E +L + N ++NM
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G +  A  +FD+M  +D+VSW  +I+ Y QS     A   F  M   G QP+  TL
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            SL           + R +H F ++ G+ M +V +G++++DMYA+   +  A  +F  L 
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDM-NVHVGSSLLDMYARWAHMREAKVIFNSLA 268

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            K+V+SWN LI G+A+ G     + +F QM+ +  E  P   TY S+  A +  G+L QG
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFE--PTHFTYSSVFTACASSGSLEQG 326

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +HA VIK+      ++   L+DMY K G I DA  +F ++ +   V WN+IIS +  H
Sbjct: 327 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 386

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +AL  F QML   V+P+ ITF+S+LTACSHSGL+ EGQ YF +M++   I+  + H
Sbjct: 387 GLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH-KIEAQVAH 445

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           +  +VDL GRAG L  A+ FI+ MP++P A++WGALLG+CR+H NM+LG  A++++FE+D
Sbjct: 446 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD 505

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
             + G +VL+SNIYA+ G+     +VR + ++ G+KK P  S +E+ N+V +F   + +H
Sbjct: 506 PHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSH 565

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P  E+I      ++ K+K +GYVPD S VL  + + ++E  L  HSE+LA+AF ++ +PP
Sbjct: 566 PMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPP 625

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              I+I KN+R+CGDCH+  KF S++  REIIVRD+NRFHHF  G+CSC DYW
Sbjct: 626 GLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 237/447 (53%), Gaps = 12/447 (2%)

Query: 142 LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           L P+   +  +L  C   R L  G+ IH  +    FE D+ +   +L+MY + G    A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
            LFD MP +D  SW  +ISGY QSG A EAL +  +M   G   +  T++S+L       
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           +   G  +H + +K+G + N+ V ++L++MYA++  MR A  +F+ +  ++VVSWN++IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            + +  +       F  M + G +P   T  S+ +  A        + VH  +++ G   
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG-Q 339

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
               IGN ++DMYAK G I  A  VF  L  +D++SWN++I+GYAQ+GL +EA+++F+ M
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 399

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
            +  ++ PN+ T++S+L A SH G L +G      + K+ +   V     +VD+ G+ GR
Sbjct: 400 LKA-KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 458

Query: 499 IDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQM--LDEGVRPDHITFVSL 555
           +++A     ++P + ++  W A++    +H   D  +    Q+  LD      H+   ++
Sbjct: 459 LNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNI 518

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIK 582
             +   +G +S+  +   MM+E  G+K
Sbjct: 519 YAS---AGRLSDAAKVRKMMKES-GVK 541



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 217/440 (49%), Gaps = 13/440 (2%)

Query: 39  DCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           +C   E     +  +   CT L  +K+   +HA +  S     +     ++N YA  G L
Sbjct: 97  NCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             ++  FD +  +++ +W  +IS Y + G+ SEA+  F +  L  G +P+ +T   +LKA
Sbjct: 157 EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM-LHLGFQPNEFTLSSLLKA 215

Query: 156 CRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
                    G+++H   LK G++ +V V +SLL MY R+     A+ +F+ +  ++  SW
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NA+I+G+ + G     + +  +M  +G      T +S+   CA S ++  G  +H +++K
Sbjct: 276 NALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIK 335

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G +   ++ N LI+MYAK G ++ A +VF +++++D+VSWNSII+ Y Q      A   
Sbjct: 336 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 395

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  M +A +QP+ +T +S+ +  +  +   +    +  +M++      V     VVD+  
Sbjct: 396 FEQMLKAKVQPNEITFLSVLTACSH-SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLG 454

Query: 393 KLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGT 450
           + G +N A    E +P+K   + W  L+     +      +      E+  E++P + G 
Sbjct: 455 RAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYA---AEQIFELDPHDSGP 511

Query: 451 YVSILPAYSHVGALRQGIKI 470
           +V +   Y+  G L    K+
Sbjct: 512 HVLLSNIYASAGRLSDAAKV 531


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/693 (38%), Positives = 392/693 (56%), Gaps = 44/693 (6%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVRDSGSWNAMISG 218
           + IH  ++K G     +  + LL  +C     F     A  +FD +   +   WN M  G
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLE-FCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           +  S + V AL +   M   G+  D  T   +L  CA+S     G  IH +++K G + +
Sbjct: 64  HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123

Query: 279 LFVSNNLINMYAKFGMMRHALRVFD-------------------------------QMME 307
           ++V  +LI+MYA+ G +  A +VFD                               ++  
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           +DVVSWN++I+ Y ++ +   A   F  M     ++PD  T+V++ S  AQ +     R 
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH +I   G F  ++ I NA++D+Y+K G + +AC +F+GL  KDVISWNTLI GY    
Sbjct: 244 VHSWINDHG-FASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV---IKNCLCFDV 483
           L  EA+ +FQ M    E  PN  T +SILPA +H+GA+  G  IH  +   +K  +    
Sbjct: 303 LYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361

Query: 484 FVATCLVDMYGKCGRIDDAMSLF-YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
            + T L+DMY KCG ID A  +F   +   S   WNA+IS   +HG+ + A + F +M  
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G+ PD ITFV LL+ACSHSG++  G+  F  M   + I P L+HYGCM+DL G +G   
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFK 481

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A   I  MP+ PD  IW +LL AC+IHGN+ELG   + +L +++  N G YVL+SNIYA
Sbjct: 482 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYA 541

Query: 663 NVGKWEGVDEVRSLARDRGL-KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
             G+W  V ++R+L  D+G+ KK PG SSIE+++ V  F  G++ HP+  +IY  L  + 
Sbjct: 542 AAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEME 601

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             ++  G+VPD S VLQ++EE+ +E  L  HSE+LAIAFG+IS+ P + + I KNLRVC 
Sbjct: 602 VLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKNLRVCK 661

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           +CH  TK IS+I +REII RD  RF HF+DG+C
Sbjct: 662 NCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/522 (30%), Positives = 266/522 (50%), Gaps = 45/522 (8%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           V+ +HA ++ +G   T ++ +KL+ F     +     ++   FD I   N+  WN+M   
Sbjct: 4   VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           +        A+   Y   ++ GL PD YTFP +LK+C   +   +G++IH  VLKLGF+ 
Sbjct: 64  HALSSDPVSALK-LYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDL 122

Query: 177 DVFVAASLLHMYCRFGLANVAR-------------------------------KLFDDMP 205
           D++V  SL+ MY + G    AR                               KLFD++P
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDE-MRLEGVSMDPITVASILPVCARSDNILSGL 264
            +D  SWNAMISGY ++GN  EAL++  E M +  V  D  T+ +++  CA+SD+I  G 
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H +I  HG   NL + N LI++Y+KFG +  A  +FD +  +DV+SWN++I  Y   N
Sbjct: 243 HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR--RGWFMEDVI 382
               A   F  M ++G  P+ +T++S+    A L      R +H +I +  +G       
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362

Query: 383 IGNAVVDMYAKLGIINSACAVFE-GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +  +++DMYAK G I++A  VF+  +  + + +WN +I+G+A +G A+ A ++F  M   
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM-RM 421

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRID 500
           N I P+  T+V +L A SH G L  G  I   + +   +   +    C++D+ G  G   
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFK 481

Query: 501 DAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +A  +   +P     V W +++    IHG  +   +F ++++
Sbjct: 482 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI 523



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 200/405 (49%), Gaps = 12/405 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  Y + G +  ++  FD I  ++V +WN+MIS YV  G   EA++ F + 
Sbjct: 153 RDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEM 212

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   V+ AC    ++  G+ +H  +   GF  ++ +  +L+ +Y +FG 
Sbjct: 213 MMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGE 272

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A +LFD +  +D  SWN +I GY       EAL +  EM   G + + +T+ SILP 
Sbjct: 273 VETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 332

Query: 254 CARSDNILSGLLIHLYIVK--HGLEFNL-FVSNNLINMYAKFGMMRHALRVFDQMME-RD 309
           CA    I  G  IH+YI K   G+  N+  +  +LI+MYAK G +  A +VFD  M  R 
Sbjct: 333 CAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRS 392

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           + +WN++I+ +        A   F+ M+  GI+PD +T V L S  +        R++  
Sbjct: 393 LSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR 452

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLA 428
            + R       +     ++D+    G+   A  +   +P++ D + W +L+     +G  
Sbjct: 453 SMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG-N 511

Query: 429 SEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHA 472
            E  E F   ++  +I P N G+YV +   Y+  G   +  KI A
Sbjct: 512 LELGESFA--KKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRA 554


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 237/586 (40%), Positives = 362/586 (61%), Gaps = 5/586 (0%)

Query: 237 LEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           LEG  +  D     ++L  C     ++ G ++H +I++     ++ + N L+NMYAK G 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A +VF++M +RD V+W ++I+ Y Q + P  A  FF  M + G  P+  TL S+   
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A          +HGF ++ G F  +V +G+A++D+Y + G+++ A  VF+ L  ++ +S
Sbjct: 171 AAAERRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN LI G+A+     +A+E+FQ M   +   P+  +Y S+  A S  G L QG  +HA +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           IK+      F    L+DMY K G I DA  +F ++ +   V WN++++ +  HG G +A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
            +F +M   G+RP+ I+F+S+LTACSHSGL+ EG  Y+ +M+++ GI P   HY  +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A  FI+ MP+ P A+IW ALL ACR+H N ELGA A++ +FE+D ++ G +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           V++ NIYA+ G+W     VR   ++ G+KK P  S +E+ N + +F   +  HP+ E+I 
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
            +   + AK+K LGYVPD S V+  V++ E+E  L  HSE++A+AF ++++PP S I I 
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KN+RVCGDCH   K  S++  REIIVRD+NRFHHFKDG CSC DYW
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 221/447 (49%), Gaps = 41/447 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           ++ L + CT    L   + +HA ++ S     +     L+N YA  G L  +R  F+ + 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            R+  TW ++IS Y +  R  +A+  F+   L  G  P+ +T   V+KA    R    G 
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDAL-LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K GF+ +V V ++LL +Y R+GL + A+ +FD +  R+  SWNA+I+G+ +  
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL++   M  +G      + AS+   C+ +  +  G  +H Y++K G +   F  N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L++MYAK G +  A ++FD++ +RDVVSWNS++ AY Q      A  +F  M++ GI+P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-----FMEDVIIGNA-----VVDMYAK 393
           + ++ +S+ +  +           H  ++  GW       +D I+  A     VVD+  +
Sbjct: 362 NEISFLSVLTACS-----------HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410

Query: 394 LGIINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQ 448
            G +N A    E +P++   + W  L+     +    L + A E VF       E++P+ 
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVF-------ELDPDD 463

Query: 449 -GTYVSILPAYSHVGALRQGIKIHARV 474
            G +V +   Y+  G      ++  ++
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKM 490


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/562 (42%), Positives = 369/562 (65%), Gaps = 10/562 (1%)

Query: 266 IHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           +HL  ++ GL   + + ++ L++MY        A R FD++ + + V   ++ + Y ++N
Sbjct: 115 LHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNN 174

Query: 325 DPITAHGFFTTM---QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
               +   F  M     A +  +   LV+  S  A++ D   + S+H  I + G F  + 
Sbjct: 175 LVYHSLELFRAMIASDSASVVDEAAALVAF-SASARVPDRGVTASLHALIAKIG-FERNA 232

Query: 382 IIGNAVVDMYAKLGI--INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMM 438
            + N ++D YAK G   +  A  VF+ +  +DV+SWN++I  YAQNG+++EAI ++ +M+
Sbjct: 233 GVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKML 291

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                I  N     ++L A +H GA++ G +IH +V++  L  +V+V T +VDMY KCGR
Sbjct: 292 NVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGR 351

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++ A   F ++   + + W+A+I+ +G+HG+G +AL  F +M   G+RP++ITF+S+L A
Sbjct: 352 VEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAA 411

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSH+GL+ EG+ +++ M++EFGI+  ++HYGCMVDL GRAG L  A++ I+ M V+PDA+
Sbjct: 412 CSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAA 471

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWGALL ACRIH N+EL  ++  RLFE+D+ N GYYVL+SNIYA    W+ V+ +R L +
Sbjct: 472 IWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVK 531

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            R ++K PG+SS E+  K+ +FY G+++HP++ +IY  L  L  +M+  GYVP+   VL 
Sbjct: 532 TRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLH 591

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           D++E+EKE  L  HSE+LA+AF +++S P+S I I KNLRVC DCH   KFI++ITEREI
Sbjct: 592 DLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREI 651

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           I+RD  RFHHFKDG+CSC DYW
Sbjct: 652 IIRDLQRFHHFKDGLCSCRDYW 673



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 190/374 (50%), Gaps = 14/374 (3%)

Query: 164 KIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           ++H   L+ G F  D + A++LLHMY        AR+ FD++P  +     AM SGY ++
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 223 GNAVEALDILDEMRLEGVS--MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
                +L++   M     +  +D           AR  +      +H  I K G E N  
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 281 VSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           V N +++ YAK G   +  A +VFD  MERDVVSWNS+IA Y Q+     A G ++ M  
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDT-MERDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292

Query: 339 --AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
              GI+ + + L ++    A     +  + +H  ++R G   E+V +G ++VDMY+K G 
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMG-LEENVYVGTSIVDMYSKCGR 351

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A   F  +  K+++SW+ +ITGY  +G   EA+E+F  M+    + PN  T++S+L 
Sbjct: 352 VEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSG-LRPNYITFISVLA 410

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSS 513
           A SH G L +G +     +K     +  V    C+VD+ G+ G +D+A SL  ++  +  
Sbjct: 411 ACSHAGLLDEG-RYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPD 469

Query: 514 SVPWNAIISCHGIH 527
           +  W A++S   IH
Sbjct: 470 AAIWGALLSACRIH 483



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 183/367 (49%), Gaps = 11/367 (2%)

Query: 65  RLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +LH L + SG   +  +S++ L++ Y +      +R  FD I   N     +M S YVR 
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 124 GRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
             +  +++ F     + S    D         A   + D      +H  + K+GFE +  
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 180 VAASLLHMYCRFGLAN--VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR- 236
           V  ++L  Y + G  +  VARK+FD M  RD  SWN+MI+ Y Q+G + EA+ +  +M  
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292

Query: 237 -LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
              G+  + + ++++L  CA +  I +G  IH  +V+ GLE N++V  ++++MY+K G +
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 352

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             A R F ++ E++++SW+++I  Y        A   FT M+++G++P+ +T +S+ +  
Sbjct: 353 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 412

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVIS 414
           +        R  +  + +       V     +VD+  + G ++ A ++ + + VK D   
Sbjct: 413 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472

Query: 415 WNTLITG 421
           W  L++ 
Sbjct: 473 WGALLSA 479



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 7/169 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           KR+H  +V  G  + V+  T +V+ Y+  G +  +   F  I  +N+ +W++MI+ Y   
Sbjct: 321 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 380

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK--LGFEWDVF 179
           GR  EA++ F +    SGLRP++ TF  VL AC +  L+D  +   + +K   G E  V 
Sbjct: 381 GRGQEALEIFTEMK-RSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVE 439

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVE 227
               ++ +  R G  + A  L  +M V+ D+  W A++S  C+    VE
Sbjct: 440 HYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA-CRIHKNVE 487


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/654 (37%), Positives = 379/654 (57%), Gaps = 6/654 (0%)

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           +GF +D+ ++  L+ MY + G   VA  +FD M  R+  SW A++ G+ Q+GN +E+L +
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +M L GV  +  T ++ L  C   + +  G  IH   VK G +    V N++I+MY+K
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A  +F+ M  R+++SWN++IA Y  +     A   F  MQ+ G   D  T  S 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
               + L   +    +H F++  G+    +  +  A++D+Y K G +  A  VF  +  K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
            VISW  LI GYAQ G  +E++E+F+ + E + I  +     S++  ++    ++QG ++
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRE-SSIQVDGFILSSMMGVFADFALVQQGKQM 299

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           HA  IK     D+ V   ++DMY KCG I++A  LF ++P  + + W  +I+ +G HG G
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            +A+  F +M  +   PD +T++++L  CSHSGLV +GQ YF  +    GIK  ++HY C
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVDL GRAG L  A N + +MP+  +  IW  LL ACR+HG++ELG      L  +DSEN
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN 479

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YV+MSNIYA+ G W+  + +R L + + LKK  G S +E++ +V  FY G+ THP  
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539

Query: 711 EKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS---P 766
           EKI++ L+ +  +MK  LGYV    + L DVEE+ K   L  HSE+LAI   ++      
Sbjct: 540 EKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEE 599

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +  I++FKNLRVCGDCH + K +S+I     +VRD+NRFH F+DG+CSC DYW
Sbjct: 600 GRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 245/454 (53%), Gaps = 10/454 (2%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           S  L+  Y   G L  +   FD +  RNV +W +++  +++ G   E++  F +  L SG
Sbjct: 10  SNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL-SG 68

Query: 142 LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           ++P+ +TF   LKAC     L  G++IH   +K GF+    V  S++ MY + G  N A 
Sbjct: 69  VKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAA 128

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
            +F+ MPVR+  SWNAMI+GY  +G   +AL +  +M+  G  +D  T  S L  C+   
Sbjct: 129 CMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLG 188

Query: 259 NILSGLLIHLYIVKHGLEF--NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
            I  G  IH +++  G  +  N  V+  LI++Y K G +  A RVF  + E+ V+SW ++
Sbjct: 189 AIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTAL 248

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y Q  +   +   F  ++++ IQ D   L S+  + A     +  + +H F ++   
Sbjct: 249 ILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPS 308

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + D+ + N+++DMY K G+IN A  +F  +P ++VISW  +ITGY ++GL  EAI +F 
Sbjct: 309 GV-DISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFD 367

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGK 495
            M + +   P+  TY+++L   SH G + +G +  +R+   + +   V    C+VD+ G+
Sbjct: 368 EM-QLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGR 426

Query: 496 CGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHG 528
            GR+ +A +L   +P  ++V  W  ++S   +HG
Sbjct: 427 AGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 204/424 (48%), Gaps = 23/424 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H + V +G          +++ Y+  G ++ +   F+ +  RN+ +WN+MI+ Y   
Sbjct: 93  RQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVA 152

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDV-- 178
           G   +A+  F +     G   +F TF   LKAC +L    +G +IH  ++  GF + V  
Sbjct: 153 GFCEKALVLFQKMQEVGGFLDEF-TFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNT 211

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            VA +L+ +Y + G   +AR++F  +  +   SW A+I GY Q GN  E++++  ++R  
Sbjct: 212 AVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRES 271

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            + +D   ++S++ V A    +  G  +H + +K     ++ V N++++MY K GM+  A
Sbjct: 272 SIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEA 331

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT-----S 353
            R+F +M  R+V+SW  +I  Y +      A   F  MQ    +PD +T +++      S
Sbjct: 332 ERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHS 391

Query: 354 IVAQLNDCRNSR--SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK- 410
            + +      SR  S HG   R   +         +VD+  + G +  A  + + +P++ 
Sbjct: 392 GLVEKGQEYFSRLCSYHGIKARVEHYA-------CMVDLLGRAGRLKEAKNLVDSMPLEA 444

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +V  W TL++    +G      EV  ++   +  NP    YV +   Y+  G  ++  +I
Sbjct: 445 NVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPV--NYVMMSNIYADAGYWKECERI 502

Query: 471 HARV 474
              V
Sbjct: 503 RELV 506



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 147/289 (50%), Gaps = 11/289 (3%)

Query: 47  EIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTK--LVNFYANLGDLSFSRHT 101
           E  F    ++C+ L  +K   ++HA L+  G + +V ++    L++ Y   G L  +R  
Sbjct: 174 EFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRV 233

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV- 160
           F HI  ++V +W ++I  Y + G L+E+++ F Q    S ++ D +    ++    +   
Sbjct: 234 FSHIEEKHVISWTALILGYAQEGNLAESMELFRQLR-ESSIQVDGFILSSMMGVFADFAL 292

Query: 161 --DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              GK++H   +K+    D+ V  S+L MY + G+ N A +LF +MP R+  SW  MI+G
Sbjct: 293 VQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITG 352

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEF 277
           Y + G   EA+ + DEM+L+    D +T  ++L  C+ S  +  G      +   HG++ 
Sbjct: 353 YGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKA 412

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND 325
            +     ++++  + G ++ A  + D M +E +V  W ++++A     D
Sbjct: 413 RVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGD 461


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/713 (35%), Positives = 403/713 (56%), Gaps = 73/713 (10%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
            Y+  L++ L  D YT+P +++AC   R+  + K++H  VLKLGF+ DV+V  +L++ + 
Sbjct: 200 LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 259

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
                  A ++F++  V DS SWN++++GY + GN  EA  I  +M              
Sbjct: 260 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP------------- 306

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
                                     E ++  SN++I ++   G++  A ++FD+M+E+D
Sbjct: 307 --------------------------ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKD 340

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           +V+W+++IA ++Q+     A   F  M + G+  D +  VS  S  A L      + +H 
Sbjct: 341 MVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 400

Query: 370 FIMRRGW------------------------------FMEDVIIGNAVVDMYAKLGIINS 399
             ++ G                               ++ D+I  N+++  Y K  ++++
Sbjct: 401 LSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDN 460

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A A+F+ +P KDV+SW+++I+GYAQN L  E + +FQ M+  +   P++ T VS++ A +
Sbjct: 461 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ-MSGFKPDETTLVSVISACA 519

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            + AL QG  +HA + +N L  +V + T L+DMY KCG ++ A+ +FY +       WNA
Sbjct: 520 RLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNA 579

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I    ++G  + +L+ F  M    V P+ ITF+ +L AC H GLV EGQ +F+ M  + 
Sbjct: 580 LILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDH 639

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            I+P++KHYGCMVDL GRAG L  A   +  MP+ PD + WGALLGAC+ HG+ E+G   
Sbjct: 640 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
             +L E+  ++ G++VL+SNIYA+ GKW+ V E+R +     + K PG S IE N  +  
Sbjct: 700 GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHE 759

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G++THP  + I D L  +  K+K  GY PD + VL DV+E+EKE  L  HSE+LAIA
Sbjct: 760 FLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIA 819

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           FG+I+  P +PI+I KNLR+C DCH   K IS+   R+I+VRD +RFHHF+ G
Sbjct: 820 FGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 181/391 (46%), Gaps = 48/391 (12%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +++ +S  ++  +   G +  +   FD +  +++ TW+++I+ + +     EA+  F   
Sbjct: 308 RSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGM 367

Query: 137 TLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G+  D       L AC NL+    GK IH   LK+G E  + +  +L++MY + G 
Sbjct: 368 H-KIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 426

Query: 194 ANVARKLFDD-------------------------------MPVRDSGSWNAMISGYCQS 222
             VARKLFD+                               MP +D  SW++MISGY Q+
Sbjct: 427 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 486

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               E L +  EM++ G   D  T+ S++  CAR   +  G  +H YI ++GL  N+ + 
Sbjct: 487 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG 546

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
             LI+MY K G +  AL VF  M+E+ + +WN++I     +    ++   F+ M++  + 
Sbjct: 547 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 606

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSV----HGF--IMRRGWFMEDVIIGNAVVDMYAKLGI 396
           P+ +T + +      L  CR+   V    H F  ++       +V     +VD+  + G 
Sbjct: 607 PNEITFMGV------LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGK 660

Query: 397 INSACAVFEGLPVK-DVISWNTLITGYAQNG 426
           +  A  +   +P+  DV +W  L+    ++G
Sbjct: 661 LQEAEELLNRMPMTPDVATWGALLGACKKHG 691



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 39/317 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H+L +  G    +     L+  Y+  GD+  +R  FD     ++ +WNSMIS Y++C
Sbjct: 396 KLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKC 455

Query: 124 GRLSEAVDCF------------------------------YQFTLTSGLRPDFYTFPPVL 153
             +  A   F                              +Q    SG +PD  T   V+
Sbjct: 456 NLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 515

Query: 154 KACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
            AC  L     GK +H  + + G   +V +  +L+ MY + G    A ++F  M  +   
Sbjct: 516 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 575

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY- 269
           +WNA+I G   +G    +LD+   M+   V+ + IT   +L  C R   ++     H Y 
Sbjct: 576 TWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC-RHMGLVDEGQHHFYS 634

Query: 270 -IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPI 327
            I  H ++ N+     ++++  + G ++ A  + ++M M  DV +W +++ A ++  D  
Sbjct: 635 MIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGD-- 692

Query: 328 TAHGFFTTMQQAGIQPD 344
           +  G     +   +QPD
Sbjct: 693 SEMGRRVGRKLIELQPD 709



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     +  +C +L  +   K +HA +  +G    V   T L++ Y   G +  +   F 
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD 161
            +  + + TWN++I      G +  ++D F        + P+  TF  VL ACR+  LVD
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMK-KCHVTPNEITFMGVLGACRHMGLVD 626

Query: 162 GKKIH--CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
             + H    +     + +V     ++ +  R G    A +L + MP+  D  +W A++  
Sbjct: 627 EGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686

Query: 219 YCQSGNA 225
             + G++
Sbjct: 687 CKKHGDS 693


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/736 (33%), Positives = 419/736 (56%), Gaps = 53/736 (7%)

Query: 133  FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS-LLHMYCRF 191
            F  F+L+S   P    F        N  + + +H  ++K G    V +  + LL++Y + 
Sbjct: 278  FLGFSLSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKLIKNGC---VGIRGNHLLNLYAKS 334

Query: 192  GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
                 A K+F+++P  D  SW  +ISG+ + G + + L +  +M+ +GV  +  T++ +L
Sbjct: 335  QNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVL 394

Query: 252  PVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
              C+ + N    G  IH +I+++GL+ +  ++N++++ Y K     +A ++F  M E+D 
Sbjct: 395  KSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDT 454

Query: 311  VSWNSIIAAYEQSNDPITAHGFFT-------------------------------TMQQA 339
            VSWN ++++Y Q  D   +   F                                 M  A
Sbjct: 455  VSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAA 514

Query: 340  GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            G   + LT      + + L+     + +H  +++ G  ++D  + N+++DMY K G +  
Sbjct: 515  GPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG-VLDDGFVRNSLIDMYCKCGEMEK 573

Query: 400  ACAVFEGLP---------------VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            A  +F+ LP               V + +SW+++++GY QNG   +A++ F  M  C+++
Sbjct: 574  ASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMI-CSQV 632

Query: 445  NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
              ++ T  S++ A +  G L  G ++H  + K     DVF+ + ++DMY KCG ++DA  
Sbjct: 633  EVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWL 692

Query: 505  LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
            +F Q    + V W ++IS   +HGQG +A+  F  M++EG+ P+ ++FV +LTACSH+GL
Sbjct: 693  IFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGL 752

Query: 565  VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            + EG +YF +M+E +GI+P  +H+ CMVDL+GRAG L     FI N  +   +S+W + L
Sbjct: 753  LEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFL 812

Query: 625  GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
             +CR+H N+E+G     +L E++  + G Y+L S+I A   +WE   ++RSL + RG+KK
Sbjct: 813  SSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKK 872

Query: 685  TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
             P  S I++ N+V  F  G+R+HP+  KIY  L  L  ++K +GY  D + V+QDVE+++
Sbjct: 873  NPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQ 932

Query: 745  KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
            ++ +L  HSE+LAIA+GIIS+ P +PI++ KNLRVC DCHN+ K+ S++  REII+RD +
Sbjct: 933  RQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIH 992

Query: 805  RFHHFKDGICSCGDYW 820
            RFHHFK G CSC DYW
Sbjct: 993  RFHHFKHGHCSCADYW 1008



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 283/592 (47%), Gaps = 69/592 (11%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F   F       + + LHA L+ +G +        L+N YA   +L  +   F+ I   +
Sbjct: 294 FSSTFSDSMNYPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTD 351

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD----GKKI 165
           V++W  +IS + R G  ++ +  F +     G+ P+ +T   VLK+C + V+    GK I
Sbjct: 352 VFSWTVLISGFARIGLSADVLGLFTKMQ-DQGVCPNQFTLSIVLKSCSSNVNDSRIGKGI 410

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG-- 223
           H  +L+ G + D  +  S+L  Y +      A KLF  M  +D+ SWN M+S Y Q G  
Sbjct: 411 HGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDM 470

Query: 224 ---------------------------NAVE--ALDILDEMRLEGVSMDPITVASILPVC 254
                                      N  E  AL++L +M   G + + +T  SI  V 
Sbjct: 471 QKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTF-SIALVL 529

Query: 255 ARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER----- 308
           A S ++L  G  IH  ++K G+  + FV N+LI+MY K G M  A  +F  + +      
Sbjct: 530 ASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMN 589

Query: 309 ----------DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
                     + VSW+S+++ Y Q+     A   F+ M  + ++ D  TL S+ S  A  
Sbjct: 590 SEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASA 649

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 R VHG+I + G  + DV +G++++DMY K G +N A  +F     ++V+ W ++
Sbjct: 650 GVLELGRQVHGYIQKIGHGL-DVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSM 708

Query: 419 ITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           I+G A +G   EA+ +F++M   NE I PN+ ++V +L A SH G L +G K + R+++ 
Sbjct: 709 ISGCALHGQGREAVRLFELM--INEGITPNEVSFVGVLTACSHAGLLEEGCK-YFRLMRE 765

Query: 478 CLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQ--VPRSSSVPWNAIISCHGIHGQGDKA 533
                      TC+VD+YG+ GR+++     +   + + SSV W + +S   +H   +  
Sbjct: 766 VYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSV-WRSFLSSCRVHKNIEMG 824

Query: 534 LNFFRQMLDEGVRP-DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           +   +++L+  + P D   ++   + C+      E  +   +MQ+  G+K +
Sbjct: 825 IWVCKKLLE--LEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQR-GVKKN 873


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/672 (37%), Positives = 386/672 (57%), Gaps = 37/672 (5%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+ +    G  N AR+LFD++P  D  + + +IS     G + EA+ I   ++  G+  D
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
                +    CA S + L    +H    + G+  ++FV N LI+ Y K   +  A RVFD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            ++ RDVVSW S+ + Y +   P      F  M  +G++P+ +T+ S+    A+L D ++
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY- 422
            + +HGF +R G  + ++ + +A+V +YAK   +  A  VF+ +P +DV+SWN ++T Y 
Sbjct: 284 GKEIHGFAVRHGMVV-NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342

Query: 423 ----------------------------------AQNGLASEAIEVFQMMEECNEINPNQ 448
                                              +NG + EA+E+F+ M++     PN+
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG-FKPNE 401

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T  SILPA S    LR G +IH  V ++    D+   T L+ MY KCG ++ + ++F  
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           + R   V WN +I  + +HG G +AL  F +ML   V+P+ +TF  +L+ CSHS LV EG
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            + F+ M  +  ++P   HY C+VD++ RAG L  A+ FIQ MP+ P AS WGALL ACR
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 581

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           ++ N+EL  +++ +LFE++  N G YV + NI      W    +VR L ++RG+ KTPG 
Sbjct: 582 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 641

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI 748
           S ++V NKV  F  G++++ + +KIY+ L  L  KMK  GY PD  +VLQD++++EK   
Sbjct: 642 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 701

Query: 749 LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
           L +HSE+LA+AFGI++   +S I++FKNLR+CGDCHN  K++S++    I+VRDS RFHH
Sbjct: 702 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 761

Query: 809 FKDGICSCGDYW 820
           FK+G CSC D W
Sbjct: 762 FKNGNCSCKDLW 773



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 268/536 (50%), Gaps = 46/536 (8%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           +L+    N+GD + +R  FD+I   +  T +++IS     G  +EA+   Y      G++
Sbjct: 103 RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIK-IYSSLQERGIK 161

Query: 144 PDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD   F    KAC    D    K++H    + G   DVFV  +L+H Y +      AR++
Sbjct: 162 PDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 221

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FDD+ VRD  SW ++ S Y + G   + +D+  EM   GV  +P+TV+SILP CA   ++
Sbjct: 222 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
            SG  IH + V+HG+  NLFV + L+++YAK   +R A  VFD M  RDVVSWN ++ AY
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 341

Query: 321 --------------EQSNDPITAH---------------------GFFTTMQQAGIQPDL 345
                         + S D + A                        F  MQ+ G +P+ 
Sbjct: 342 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 401

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T+ S+    +   + R  + +H ++ R  W + D+    A++ MYAK G +N +  VF+
Sbjct: 402 ITISSILPACSFSENLRMGKEIHCYVFRH-WKVGDLTSTTALLYMYAKCGDLNLSRNVFD 460

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  KDV++WNT+I   A +G   EA+ +F  M   + + PN  T+  +L   SH   + 
Sbjct: 461 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKM-LLSRVQPNSVTFTGVLSGCSHSRLVE 519

Query: 466 QGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC 523
           +G++I   + ++ L   D    +C+VD+Y + GR+++A      +P   ++  W A+++ 
Sbjct: 520 EGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEE 578
             ++   + A    +++ +  + P++   +VSL      + + SE  +   +M+E 
Sbjct: 580 CRVYKNVELAKISAKKLFE--IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKER 633



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 222/486 (45%), Gaps = 84/486 (17%)

Query: 20  LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTV 79
           ++   P+F AAA +  +S D L                     VK +H      G +  V
Sbjct: 160 IKPDMPVFLAAAKACAVSGDAL--------------------RVKEVHDDATRCGVMSDV 199

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F    L++ Y     +  +R  FD +  R+V +W S+ S YV+CG   + +D F +    
Sbjct: 200 FVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW- 258

Query: 140 SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           SG++P+  T   +L AC  L D   GK+IH   ++ G   ++FV ++L+ +Y +      
Sbjct: 259 SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVRE 318

Query: 197 ARKLFDDMPVR-----------------------------------DSGSWNAMISGYCQ 221
           AR +FD MP R                                   D  +WNA+I G  +
Sbjct: 319 ARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCME 378

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G + EA+++  +M+  G   + IT++SILP C+ S+N+  G  IH Y+ +H    +L  
Sbjct: 379 NGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTS 438

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           +  L+ MYAK G +  +  VFD M  +DVV+WN++I A     +   A   F  M  + +
Sbjct: 439 TTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRV 498

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWFME-DVIIGNAVVDMYAKLG 395
           QP+ +T   +      L+ C +SR V   +     M R   +E D    + VVD+Y++ G
Sbjct: 499 QPNSVTFTGV------LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAG 552

Query: 396 IINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLAS-EAIEVFQMMEECNEINPNQ-G 449
            +N A    +G+P++   S W  L+     Y    LA   A ++F       EI PN  G
Sbjct: 553 RLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF-------EIEPNNPG 605

Query: 450 TYVSIL 455
            YVS+ 
Sbjct: 606 NYVSLF 611



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 3/244 (1%)

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G  ++ +   +G  N A  +F+ +P  D  + +TLI+    +GL++EAI+++  ++E  
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQE-R 158

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            I P+   +++   A +  G   +  ++H    +  +  DVFV   L+  YGKC  ++ A
Sbjct: 159 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 218

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F  +     V W ++ SC+   G   K ++ FR+M   GV+P+ +T  S+L AC+  
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
             +  G+   H      G+  +L     +V L+ +   +  A      MP R D   W  
Sbjct: 279 KDLKSGKE-IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNG 336

Query: 623 LLGA 626
           +L A
Sbjct: 337 VLTA 340


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 275/784 (35%), Positives = 414/784 (52%), Gaps = 57/784 (7%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S   +V  Y +   +  + + F  +  RN+ TW  MIS YVR  +  +  D F + 
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIF-RM 213

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
               G  PD   F  VL A   L D    + +   VLK GFE DV +  S+L++Y R   
Sbjct: 214 MHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDAS 273

Query: 194 A-NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI----TVA 248
           A ++A K FD M  R+  +W+ MI+     G    A+ +           DP+    +  
Sbjct: 274 ALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR--------DPVKSIPSQT 325

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS-NNLINMYAKFGMMRHALRVFDQMME 307
           ++L   AR      G +    I+   +   + VS N +I  Y + GM+  A  +FD+M  
Sbjct: 326 ALLTGLARC-----GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPF 380

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R+ +SW  +IA Y Q+     A      + + G+ P L +L S     + +      R V
Sbjct: 381 RNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQV 440

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKL-------------------------------GI 396
           H   ++ G      +  NA++ MY K                                 +
Sbjct: 441 HSLAVKAGCQFNSYVC-NALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNM 499

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A  +F+ +  +DV+SW T+I+ YAQ     EA+E F+ M   +E  PN      +L 
Sbjct: 500 LEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE-KPNSPILTILLS 558

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
               +G+ + G +IH   IK+ +  ++ VA  L+ MY KCG   D+  +F  +       
Sbjct: 559 VCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEERDIFT 617

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN  I+    HG G +A+  +  M   GV P+ +TFV LL ACSH+GLV EG ++F  M 
Sbjct: 618 WNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMS 677

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
            ++G+ P L+HY CMVDL GR G +  A  FI +MP+ PD  IW ALLGAC+IH N E+G
Sbjct: 678 RDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIG 737

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
             A+++LF  +  N G YV++SNIY+++G W  V E+R + + RG+ K PG S +++ NK
Sbjct: 738 RRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNK 797

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F TG++ H K E+I   L++L   ++  GYVPD  FVL D++E++KE  L  HSE+L
Sbjct: 798 VHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKL 857

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           A+A+G++ +P   PIQI KNLR+CGDCH + KF+S +T+R+I +RD NRFHHF++G CSC
Sbjct: 858 AVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSC 917

Query: 817 GDYW 820
           GD+W
Sbjct: 918 GDFW 921



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 179/672 (26%), Positives = 295/672 (43%), Gaps = 106/672 (15%)

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT-----LTSGLRP 144
           A LG L  +R  FD + +R++  WNSMIS Y   G L +A   F   +       + L  
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLS 103

Query: 145 DFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
            +     VL A R + DG     +V      W+  V+      Y + G   +AR+LFD M
Sbjct: 104 GYARLGRVLDA-RRVFDGMPERNTV-----AWNAMVSC-----YVQNGDITMARRLFDAM 152

Query: 205 PVRDSGSWNAMISGYCQSGNAVEA-------------------------------LDILD 233
           P RD  SWN+M++GYC S   V+A                                DI  
Sbjct: 153 PSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFR 212

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK-F 292
            M  EG S D    AS+L       ++    ++   ++K G E ++ +  +++N+Y +  
Sbjct: 213 MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA 272

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  A++ FD M+ER+  +W+++IAA         A   +      G  P + ++ S T
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GRDP-VKSIPSQT 325

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           +++  L  C   R     I+        V+  NA++  Y + G+++ A  +F+ +P ++ 
Sbjct: 326 ALLTGLARC--GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNT 383

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ISW  +I GYAQNG + EA+++ Q +   N + P+  +  S   A SH+GAL  G ++H+
Sbjct: 384 ISWAGMIAGYAQNGRSEEALDLLQALHR-NGMLPSLSSLTSSFLACSHIGALETGRQVHS 442

Query: 473 RVIKNCLCFDVFVATCLVDMYGKC-------------------------------GRIDD 501
             +K    F+ +V   L+ MYGKC                                 ++D
Sbjct: 443 LAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLED 502

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F  +     V W  IIS +    +GD+A+ FF+ ML E  +P+      LL+ C  
Sbjct: 503 ARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGG 562

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            G    GQ+  H +  + G+   L     ++ ++ + G    +H    +M  R D   W 
Sbjct: 563 LGSAKLGQQ-IHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEER-DIFTWN 619

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGY------YVLMSNIYANVGKW-EGVDEVR 674
             +  C  HG   LG  A  +++E   E+VG       +V + N  ++ G   EG    +
Sbjct: 620 TFITGCAQHG---LGREAI-KMYE-HMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFK 674

Query: 675 SLARDRGLKKTP 686
           S++RD GL  TP
Sbjct: 675 SMSRDYGL--TP 684



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 204/479 (42%), Gaps = 88/479 (18%)

Query: 60  LHHVKRLHALLVVSGK--IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           L H  R+ A + V G+  +K++ S T L+   A  G ++ +R  F+ I    V +WN+MI
Sbjct: 300 LSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMI 359

Query: 118 SVYVRCGRLSEAVDCF----YQFTLT--------------------------SGLRPDFY 147
           + Y++ G + EA + F    ++ T++                          +G+ P   
Sbjct: 360 TGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLS 419

Query: 148 TFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMY--CR--------FGLA 194
           +      AC +   L  G+++H   +K G +++ +V  +L+ MY  CR        F   
Sbjct: 420 SLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRM 479

Query: 195 NV---------------------ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
            V                     AR +FD+M  RD  SW  +IS Y Q+    EA++   
Sbjct: 480 RVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFK 539

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M  E    +   +  +L VC    +   G  IH   +KHG++  L V+N L++MY K G
Sbjct: 540 TMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG 599

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
               + +VFD M ERD+ +WN+ I    Q      A   +  M+  G+ P+ +T V L  
Sbjct: 600 CA-DSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGL-- 656

Query: 354 IVAQLNDCRNSRSV-HGF----IMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGL 407
               LN C ++  V  G+     M R + +  ++   A +VD+  + G +  A      +
Sbjct: 657 ----LNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDM 712

Query: 408 PVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           P++ D + W+ L+     +    +   A E     E       N G YV +   YS +G
Sbjct: 713 PIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEP-----SNAGNYVMLSNIYSSLG 766



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 141/293 (48%), Gaps = 11/293 (3%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           +SL +   C  N         ++  C  + +V+++   +    ++K   S    +     
Sbjct: 441 HSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRM----RVKDTVSWNSFIAALVQ 496

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
              L  +RH FD++  R+V +W ++IS Y +  R  EAV+ F++  L    +P+      
Sbjct: 497 NNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVE-FFKTMLHEHEKPNSPILTI 555

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L  C  L     G++IH   +K G + ++ VA +L+ MY + G A+ + K+FD M  RD
Sbjct: 556 LLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERD 614

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             +WN  I+G  Q G   EA+ + + M   GV  + +T   +L  C+ +  +  G     
Sbjct: 615 IFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFK 674

Query: 269 YIVK-HGLEFNLFVSNNLINMYAKFGMMRHALR-VFDQMMERDVVSWNSIIAA 319
            + + +GL   L     ++++  + G ++ A + ++D  +E D V W++++ A
Sbjct: 675 SMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGA 727


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/732 (36%), Positives = 402/732 (54%), Gaps = 78/732 (10%)

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV-LKLGFEWDVFV 180
           RL EA+D  Y     S    +  ++  +L  C    ++V  K++   + L L    D F+
Sbjct: 6   RLREAIDALY-----SRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFL 60

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN---------------- 224
              LLH+Y + G  + AR LFD M  RD  SWNAM+S Y +SGN                
Sbjct: 61  QNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDA 120

Query: 225 ---------------AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
                          + +AL+    M+ EG      T  S+L  C++  +I  G  IH  
Sbjct: 121 VSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGR 180

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           IV   L  ++FV N L NMYAK G +  A  +FD+M+ ++VVSWNS+I+ Y Q+  P T 
Sbjct: 181 IVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETC 240

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  MQ +G+ PD +T+ ++ S                                    
Sbjct: 241 TKLFCEMQSSGLMPDQVTISNILS------------------------------------ 264

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
            Y + G I+ AC  F  +  KD + W T++ G AQNG   +A+ +F+ M   N + P+  
Sbjct: 265 AYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLEN-VRPDNF 323

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T  S++ + + + +L QG  +H + +   +  D+ V++ LVDMY KCG   DA  +F ++
Sbjct: 324 TISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM 383

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
              + + WN++I  +  +G+  +AL  + +ML E ++PD+ITFV +L+AC H+GLV  GQ
Sbjct: 384 LTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQ 443

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            YF+ + +  G+ P   HY CM++L GRAG++  A + I++M   P+  IW  LL  CRI
Sbjct: 444 GYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRI 503

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
           + ++  G +A+  LFE+D  N G Y+++SNIYA  G+W+ V  VRSL ++  +KK   +S
Sbjct: 504 NCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYS 563

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
            IE++N+V  F   +RTH + E+IY+EL  L  K++  G+ PD + VL DV E+EK   +
Sbjct: 564 WIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSI 623

Query: 750 TSHSERLAIAFGIISSP-PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
             HSE+LA+AF +I  P  ++PI+I KN+RVCGDCH + KF+S+I  R II+RD NRFHH
Sbjct: 624 CYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHH 683

Query: 809 FKDGICSCGDYW 820
           F +G CSC D W
Sbjct: 684 FIEGRCSCKDSW 695



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 225/485 (46%), Gaps = 84/485 (17%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
            F   +L++ YA  G+LS +R  FD +S R+V++WN+M+S Y + G + +    F Q ++
Sbjct: 58  TFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSV 117

Query: 139 ------------------------------TSGLRPDFYTFPPVLKACRNLVD---GKKI 165
                                           G     YT   VL AC  L+D   GK+I
Sbjct: 118 HDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQI 177

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++       VFV  +L +MY + G  + AR LFD M  ++  SWN+MISGY Q+G  
Sbjct: 178 HGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQP 237

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
                +  EM+  G+  D +T+++IL                                  
Sbjct: 238 ETCTKLFCEMQSSGLMPDQVTISNILSA-------------------------------- 265

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
              Y + G +  A + F ++ E+D V W +++    Q+     A   F  M    ++PD 
Sbjct: 266 ---YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDN 322

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ S+ S  A+L      ++VHG  +  G    D+++ +A+VDMY+K G    A  VF+
Sbjct: 323 FTISSVVSSCARLASLCQGQAVHGKAVIFG-VDHDLLVSSALVDMYSKCGETADAWIVFK 381

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  ++VISWN++I GYAQNG   EA+ +++ M   N + P+  T+V +L A  H G + 
Sbjct: 382 RMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHEN-LKPDNITFVGVLSACMHAGLVE 440

Query: 466 QG-------IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPW 517
           +G        KIH         FD +  +C++++ G+ G +D A+ L   +    + + W
Sbjct: 441 RGQGYFYSISKIHGMNPT----FDHY--SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIW 494

Query: 518 NAIIS 522
           + ++S
Sbjct: 495 STLLS 499



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 36/313 (11%)

Query: 44  ESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           ES +     +  +C++L  +KR   +H  +V +   ++VF    L N YA  G L  +R 
Sbjct: 152 ESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARW 211

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD +  +NV +WNSMIS Y++ G+       F +   +SGL PD  T   +L A     
Sbjct: 212 LFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQ-SSGLMPDQVTISNILSA----- 265

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                                      Y + G  + A K F ++  +D   W  M+ G  
Sbjct: 266 ---------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCA 298

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+G   +AL +  EM LE V  D  T++S++  CAR  ++  G  +H   V  G++ +L 
Sbjct: 299 QNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLL 358

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           VS+ L++MY+K G    A  VF +M+ R+V+SWNS+I  Y Q+   + A   +  M    
Sbjct: 359 VSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHEN 418

Query: 341 IQPDLLTLVSLTS 353
           ++PD +T V + S
Sbjct: 419 LKPDNITFVGVLS 431


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/653 (37%), Positives = 391/653 (59%), Gaps = 13/653 (1%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           +VF   +L++ Y +  L ++AR++FD++P  D  S+N +I+ Y   G     L + +E+R
Sbjct: 74  NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
              + +D  T++ ++  C     ++  L  H ++V  G +    V+N ++  Y++ G + 
Sbjct: 134 ELRLGLDGFTLSGVITACGDDVGLVRQL--HCFVVVCGHDCYASVNNAVLACYSRKGFLS 191

Query: 297 HALRVFDQMME---RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            A RVF +M E   RD VSWN++I A  Q  + + A G F  M + G++ D+ T+ S+ +
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLT 251

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC-AVFEGLPVKDV 412
               + D    R  HG +++ G F  +  +G+ ++D+Y+K       C  VFE +   D+
Sbjct: 252 AFTCVKDLVGGRQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310

Query: 413 ISWNTLITGYA-QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           + WNT+I+G++    L+ + +  F+ M+  N   P+  ++V +  A S++ +   G ++H
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQR-NGFRPDDCSFVCVTSACSNLSSPSLGKQVH 369

Query: 472 ARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           A  IK+ + ++ V V   LV MY KCG + DA  +F  +P  ++V  N++I+ +  HG  
Sbjct: 370 ALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVE 429

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            ++L  F  ML++ + P+ ITF+++L+AC H+G V EGQ+YF+MM+E F I+P  +HY C
Sbjct: 430 VESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSC 489

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           M+DL GRAG L  A   I+ MP  P +  W  LLGACR HGN+EL   A++    ++  N
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYN 549

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YV++SN+YA+  +WE    V+ L R+RG+KK PG S IE++ KV +F   + +HP  
Sbjct: 550 AAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMI 609

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVL---QDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           ++I+  +  +  KMK  GYVPD  + L   ++VE DE+E  L  HSE+LA+AFG+IS+  
Sbjct: 610 KEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEE 669

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             PI + KNLR+CGDCHN  K IS +T REI VRD++RFH FK+G CSC DYW
Sbjct: 670 GVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 274/555 (49%), Gaps = 31/555 (5%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  L+  C  LH+ +    L     +   VFS   L+N YA    +  +R  FD I   +
Sbjct: 50  FTLLYSKCGSLHNAQTSFHLT----QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPD 105

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQF-TLTSGLRPDFYTFPPVLKACRNLVD-GKKIHC 167
           + ++N++I+ Y   G     +  F +   L  GL  D +T   V+ AC + V   +++HC
Sbjct: 106 IVSYNTLIAAYADRGECGPTLRLFEEVRELRLGL--DGFTLSGVITACGDDVGLVRQLHC 163

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV---RDSGSWNAMISGYCQSGN 224
            V+  G +    V  ++L  Y R G  + AR++F +M     RD  SWNAMI    Q   
Sbjct: 164 FVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHRE 223

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
            +EA+ +  EM   G+ +D  T+AS+L       +++ G   H  ++K G   N  V + 
Sbjct: 224 GMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSG 283

Query: 285 LINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF--FTTMQQAGI 341
           LI++Y+K  G M    +VF+++   D+V WN++I+ +    D ++  G   F  MQ+ G 
Sbjct: 284 LIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYED-LSEDGLWCFREMQRNGF 342

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD  + V +TS  + L+     + VH   ++       V + NA+V MY+K G ++ A 
Sbjct: 343 RPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDAR 402

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+ +P  + +S N++I GYAQ+G+  E++ +F++M E  +I PN  T++++L A  H 
Sbjct: 403 RVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLE-KDIAPNSITFIAVLSACVHT 461

Query: 462 GALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
           G + +G K +  ++K   C +      +C++D+ G+ G++ +A  +   +P    S+ W 
Sbjct: 462 GKVEEGQK-YFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWA 520

Query: 519 AIISCHGIHGQGD---KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            ++     HG  +   KA N F ++      P    +V L    + +    E      +M
Sbjct: 521 TLLGACRKHGNVELAVKAANEFLRLEPYNAAP----YVMLSNMYASAARWEEAATVKRLM 576

Query: 576 QEEFGIKPHLKHYGC 590
           +E  G+K   K  GC
Sbjct: 577 RER-GVK---KKPGC 587



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 192/441 (43%), Gaps = 53/441 (12%)

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T  ++L  C    ++++G ++H    K  +  + ++SN+   +Y+K G + +A   F   
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS- 364
              +V S+N++I AY + +    A   F  +     QPD+++  +L +  A   +C  + 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIP----QPDIVSYNTLIAAYADRGECGPTL 126

Query: 365 --------------------------------RSVHGFIMRRGWFMEDVI--IGNAVVDM 390
                                           R +H F++  G    D    + NAV+  
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCG---HDCYASVNNAVLAC 183

Query: 391 YAKLGIINSACAVFEGLPV---KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           Y++ G ++ A  VF  +     +D +SWN +I    Q+    EA+ +F+ M     +  +
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVR-RGLKVD 242

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC-GRIDDAMSLF 506
             T  S+L A++ V  L  G + H  +IK+    +  V + L+D+Y KC G + +   +F
Sbjct: 243 MFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVF 302

Query: 507 YQVPRSSSVPWNAIISCHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
            ++     V WN +IS   ++    +  L  FR+M   G RPD  +FV + +ACS+    
Sbjct: 303 EEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSP 362

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
           S G++   +  +       +     +V ++ + G++  A      MP     S+   + G
Sbjct: 363 SLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAG 422

Query: 626 ACRIHGNMELGAVASDRLFEV 646
             + HG      V S RLFE+
Sbjct: 423 YAQ-HGV----EVESLRLFEL 438


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/628 (39%), Positives = 377/628 (60%), Gaps = 24/628 (3%)

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI----TVASILPVCARSDNI 260
           P   +   N +I   C+ GN  +AL++L        S++P     T   ++  C   +++
Sbjct: 35  PTASTADNNKLIQSLCKQGNLTQALELL--------SLEPNPAQHTYELLILSCTHQNSL 86

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
           L    +H +++++G + + F++  LINMY+ F  + +A +VFD+   R +  +N++  A 
Sbjct: 87  LDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRAL 146

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTL-------VSLTSIVAQLNDCRNSRSVHGFIMR 373
             +         +  M   GI  D  T        V+    V+ LN     R +H  I+R
Sbjct: 147 SLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLN---KGREIHAHILR 203

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G +   V I   +VDMYAK G +++A  VF  +PVK+V+SW+ +I  YA+NG A EA+E
Sbjct: 204 HG-YDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALE 262

Query: 434 VF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           +F ++M E  ++ PN  T VS+L A + + AL QG  IH  +++  L   + V + LV M
Sbjct: 263 LFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTM 322

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y +CG+++    +F Q+ +   V WN++IS +G+HG G KA+  F +M   GV P  I+F
Sbjct: 323 YARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISF 382

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           VS+L ACSH+GLV EG+  F+ M    GI P ++HY CMVDL GRA  L  A   I+NM 
Sbjct: 383 VSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMR 442

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           + P   +WG+LLG+CRIH N+EL   AS RLF+++  N G YVL+++IYA  G W+GV  
Sbjct: 443 IEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKR 502

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           V+ L   RGL+K PG S IEV  K+  F + +  +P+ E+++  L  L+ ++K  GYVP 
Sbjct: 503 VKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQ 562

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
              VL D++  EKE I+  HSE+LA+AFG+I+S     I+I K+LR+C DCH++TKFIS+
Sbjct: 563 TKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISK 622

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
              +EI+VRD NRFHHF+DG+CSCGDYW
Sbjct: 623 FANKEILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 177/323 (54%), Gaps = 13/323 (4%)

Query: 41  LENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           LE    +  ++ L  SCT    L   +R+H  L+ +G  +  F +TKL+N Y+    +  
Sbjct: 64  LEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDN 123

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           +R  FD    R +Y +N++       G   E ++ + +   + G+  D +T+  VLKAC 
Sbjct: 124 ARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMN-SIGIPSDRFTYTYVLKACV 182

Query: 158 N-------LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
                   L  G++IH  +L+ G++  V +  +L+ MY +FG  + A  +F+ MPV++  
Sbjct: 183 ASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVV 242

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHL 268
           SW+AMI+ Y ++G A EAL++  E+ LE   + P  +T+ S+L  CA    +  G LIH 
Sbjct: 243 SWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHG 302

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           YI++ GL+  L V + L+ MYA+ G +    RVFDQM +RDVVSWNS+I++Y        
Sbjct: 303 YILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKK 362

Query: 329 AHGFFTTMQQAGIQPDLLTLVSL 351
           A G F  M   G++P  ++ VS+
Sbjct: 363 AIGIFEEMTYNGVEPSPISFVSV 385


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/672 (37%), Positives = 386/672 (57%), Gaps = 37/672 (5%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+ +    G  N AR+LFD++P  D  + + +IS     G + EA+ I   ++  G+  D
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
                +    CA S + L    +H    + G+  ++FV N LI+ Y K   +  A RVFD
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            ++ RDVVSW S+ + Y +   P      F  M  +G++P+ +T+ S+    A+L D ++
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY- 422
            + +HGF +R G  + ++ + +A+V +YAK   +  A  VF+ +P +DV+SWN ++T Y 
Sbjct: 198 GKEIHGFAVRHGMVV-NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256

Query: 423 ----------------------------------AQNGLASEAIEVFQMMEECNEINPNQ 448
                                              +NG + EA+E+F+ M++     PN+
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG-FKPNE 315

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T  SILPA S    LR G +IH  V ++    D+   T L+ MY KCG ++ + ++F  
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           + R   V WN +I  + +HG G +AL  F +ML   V+P+ +TF  +L+ CSHS LV EG
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            + F+ M  +  ++P   HY C+VD++ RAG L  A+ FIQ MP+ P AS WGALL ACR
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 495

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           ++ N+EL  +++ +LFE++  N G YV + NI      W    +VR L ++RG+ KTPG 
Sbjct: 496 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 555

Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI 748
           S ++V NKV  F  G++++ + +KIY+ L  L  KMK  GY PD  +VLQD++++EK   
Sbjct: 556 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 615

Query: 749 LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHH 808
           L +HSE+LA+AFGI++   +S I++FKNLR+CGDCHN  K++S++    I+VRDS RFHH
Sbjct: 616 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 675

Query: 809 FKDGICSCGDYW 820
           FK+G CSC D W
Sbjct: 676 FKNGNCSCKDLW 687



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 268/535 (50%), Gaps = 46/535 (8%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           +L+    N+GD + +R  FD+I   +  T +++IS     G  +EA+   Y      G++
Sbjct: 17  RLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIK-IYSSLQERGIK 75

Query: 144 PDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD   F    KAC    D    K++H    + G   DVFV  +L+H Y +      AR++
Sbjct: 76  PDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRV 135

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FDD+ VRD  SW ++ S Y + G   + +D+  EM   GV  +P+TV+SILP CA   ++
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
            SG  IH + V+HG+  NLFV + L+++YAK   +R A  VFD M  RDVVSWN ++ AY
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAY 255

Query: 321 --------------EQSNDPITAH---------------------GFFTTMQQAGIQPDL 345
                         + S D + A                        F  MQ+ G +P+ 
Sbjct: 256 FKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNE 315

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T+ S+    +   + R  + +H ++ R  W + D+    A++ MYAK G +N +  VF+
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRH-WKVGDLTSTTALLYMYAKCGDLNLSRNVFD 374

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  KDV++WNT+I   A +G   EA+ +F  M   + + PN  T+  +L   SH   + 
Sbjct: 375 MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKM-LLSRVQPNSVTFTGVLSGCSHSRLVE 433

Query: 466 QGIKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC 523
           +G++I   + ++ L   D    +C+VD+Y + GR+++A      +P   ++  W A+++ 
Sbjct: 434 EGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQE 577
             ++   + A    +++ +  + P++   +VSL      + + SE  +   +M+E
Sbjct: 494 CRVYKNVELAKISAKKLFE--IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKE 546



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 222/486 (45%), Gaps = 84/486 (17%)

Query: 20  LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTV 79
           ++   P+F AAA +  +S D L                     VK +H      G +  V
Sbjct: 74  IKPDMPVFLAAAKACAVSGDAL--------------------RVKEVHDDATRCGVMSDV 113

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F    L++ Y     +  +R  FD +  R+V +W S+ S YV+CG   + +D F +    
Sbjct: 114 FVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGW- 172

Query: 140 SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           SG++P+  T   +L AC  L D   GK+IH   ++ G   ++FV ++L+ +Y +      
Sbjct: 173 SGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVRE 232

Query: 197 ARKLFDDMPVR-----------------------------------DSGSWNAMISGYCQ 221
           AR +FD MP R                                   D  +WNA+I G  +
Sbjct: 233 ARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCME 292

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G + EA+++  +M+  G   + IT++SILP C+ S+N+  G  IH Y+ +H    +L  
Sbjct: 293 NGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTS 352

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           +  L+ MYAK G +  +  VFD M  +DVV+WN++I A     +   A   F  M  + +
Sbjct: 353 TTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRV 412

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWFME-DVIIGNAVVDMYAKLG 395
           QP+ +T   +      L+ C +SR V   +     M R   +E D    + VVD+Y++ G
Sbjct: 413 QPNSVTFTGV------LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAG 466

Query: 396 IINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLAS-EAIEVFQMMEECNEINPNQ-G 449
            +N A    +G+P++   S W  L+     Y    LA   A ++F       EI PN  G
Sbjct: 467 RLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLF-------EIEPNNPG 519

Query: 450 TYVSIL 455
            YVS+ 
Sbjct: 520 NYVSLF 525



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 3/244 (1%)

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G  ++ +   +G  N A  +F+ +P  D  + +TLI+    +GL++EAI+++  ++E  
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQE-R 72

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            I P+   +++   A +  G   +  ++H    +  +  DVFV   L+  YGKC  ++ A
Sbjct: 73  GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F  +     V W ++ SC+   G   K ++ FR+M   GV+P+ +T  S+L AC+  
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
             +  G+   H      G+  +L     +V L+ +   +  A      MP R D   W  
Sbjct: 193 KDLKSGKE-IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNG 250

Query: 623 LLGA 626
           +L A
Sbjct: 251 VLTA 254


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/593 (40%), Positives = 362/593 (61%), Gaps = 6/593 (1%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +LD +    +  +    + +L  C     +  G  IH +I     E +L + N ++NM
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G +  A  +FD+M  +D+VSW  +I+ Y QS     A   F  M   G QP+  TL
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            SL           + R +H F ++ G+ M +V +G++++DMYA+   +  A  +F  L 
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDM-NVHVGSSLLDMYARWAHMREAKVIFNSLA 268

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
            K+V+SWN LI G+A+ G     + +F QM+ +  E  P   TY S+L A +  G+L QG
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFE--PTHFTYSSVL-ACASSGSLEQG 325

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +HA VIK+      ++   L+DMY K G I DA  +F ++ +   V WN+IIS +  H
Sbjct: 326 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 385

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +AL  F QML   V+P+ ITF+S+LTACSHSGL+ EGQ YF +M++   I+  + H
Sbjct: 386 GLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH-KIEAQVAH 444

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           +  +VDL GRAG L  A+ FI+ MP++P A++WGALLGACR+H NM+LG  A++++FE+D
Sbjct: 445 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELD 504

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
             + G +VL+SNIYA+ G+     +VR + ++ G+KK P  S +E+ N+V +F   + +H
Sbjct: 505 PHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSH 564

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P  E+I      ++ K+K +GYVPD S VL  + + ++E  L  HSE+LA+AF ++ +PP
Sbjct: 565 PMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPP 624

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              I+I KN+R+CGDCH+  KF S++  REIIVRD+NRFHHF  G+CSC DYW
Sbjct: 625 GLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/447 (30%), Positives = 237/447 (53%), Gaps = 13/447 (2%)

Query: 142 LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           L P+   +  +L  C   R L  G+ IH  +    FE D+ +   +L+MY + G    A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
            LFD MP +D  SW  +ISGY QSG A EAL +  +M   G   +  T++S+L       
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           +   G  +H + +K+G + N+ V ++L++MYA++  MR A  +F+ +  ++VVSWN++IA
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            + +  +       F  M + G +P   T  S+ +  A        + VH  +++ G   
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGG-Q 338

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
               IGN ++DMYAK G I  A  VF  L  +D++SWN++I+GYAQ+GL +EA+++F+ M
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 398

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
            +  ++ PN+ T++S+L A SH G L +G      + K+ +   V     +VD+ G+ GR
Sbjct: 399 LKA-KVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGR 457

Query: 499 IDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQM--LDEGVRPDHITFVSL 555
           +++A     ++P + ++  W A++    +H   D  +    Q+  LD      H+   ++
Sbjct: 458 LNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNI 517

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIK 582
             +   +G +S+  +   MM+E  G+K
Sbjct: 518 YAS---AGRLSDAAKVRKMMKES-GVK 540



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 218/440 (49%), Gaps = 14/440 (3%)

Query: 39  DCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDL 95
           +C   E     +  +   CT L  +K+   +HA +  S     +     ++N YA  G L
Sbjct: 97  NCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 96  SFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
             ++  FD +  +++ +W  +IS Y + G+ SEA+  F +  L  G +P+ +T   +LKA
Sbjct: 157 EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKM-LHLGFQPNEFTLSSLLKA 215

Query: 156 CRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
                    G+++H   LK G++ +V V +SLL MY R+     A+ +F+ +  ++  SW
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSW 275

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NA+I+G+ + G     + +  +M  +G      T +S+L  CA S ++  G  +H +++K
Sbjct: 276 NALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIK 334

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G +   ++ N LI+MYAK G ++ A +VF +++++D+VSWNSII+ Y Q      A   
Sbjct: 335 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 394

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F  M +A +QP+ +T +S+ +  +  +   +    +  +M++      V     VVD+  
Sbjct: 395 FEQMLKAKVQPNEITFLSVLTACSH-SGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLG 453

Query: 393 KLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGT 450
           + G +N A    E +P+K   + W  L+     +      +      E+  E++P + G 
Sbjct: 454 RAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYA---AEQIFELDPHDSGP 510

Query: 451 YVSILPAYSHVGALRQGIKI 470
           +V +   Y+  G L    K+
Sbjct: 511 HVLLSNIYASAGRLSDAAKV 530


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/592 (39%), Positives = 355/592 (59%), Gaps = 6/592 (1%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           LD+LD   L   +  P    + +  CA+S N+     +H ++       + F+ N+LI++
Sbjct: 39  LDLLDAGEL---APTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL 95

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G +  A +VFD+M  +D+VSW S+IA Y Q++ P  A G    M +   +P+  T 
Sbjct: 96  YCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTF 155

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            SL        D    R +H   ++  W  EDV +G+A++DMYA+ G+++ A AVF+ L 
Sbjct: 156 ASLLKAAGAHADSGIGRQIHALAVKCDWH-EDVYVGSALLDMYARCGMMDMATAVFDKLD 214

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            K+ +SWN LI+G+A+ G    A+  F  M   N       TY S+  + + +GAL QG 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMTFAEMLR-NGFEATHFTYSSVFSSIARLGALEQGK 273

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
            +HA +IK+      F    L+DMY K G + DA  +F +V     V WN +++    +G
Sbjct: 274 WVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYG 333

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +A++ F +M   G+  + +TF+ +LTACSH GLV EG+RYF MM+E + ++P + H+
Sbjct: 334 LGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHF 392

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
             +V L GRAG L  A  FI  MP+ P A++WGALL ACR+H N ++G  A+D +FE+D 
Sbjct: 393 VTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP 452

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           ++ G  VL+ NIYA+ G+W+    VR + +  G+KK P  S +E+ N V +F   + THP
Sbjct: 453 DDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHP 512

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           + E+IY     ++ K++  GYVPD  +VL  V++ E+E  L  HSE+LA+AF +I  P  
Sbjct: 513 RAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAG 572

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + I+I KN+R+CGDCH+  K+IS++  REI+VRD+NRFHHF +G CSC DYW
Sbjct: 573 ATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 204/383 (53%), Gaps = 3/383 (0%)

Query: 146 FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           ++TF       +NL D +K+H  +    F  D F+  SL+H+YC+ G    ARK+FD+M 
Sbjct: 54  YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            +D  SW ++I+GY Q+    EA+ +L  M       +  T AS+L       +   G  
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH   VK     +++V + L++MYA+ GMM  A  VFD++  ++ VSWN++I+ + +  D
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
             TA   F  M + G +    T  S+ S +A+L      + VH  +++    M     GN
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMT-AFAGN 292

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            ++DMYAK G +  A  VF+ +  KD+++WNT++T +AQ GL  EA+  F+ M +   I 
Sbjct: 293 TLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSG-IY 351

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
            NQ T++ IL A SH G +++G +    + +  L  ++     +V + G+ G ++ A+  
Sbjct: 352 LNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVF 411

Query: 506 FYQVP-RSSSVPWNAIISCHGIH 527
            +++P   ++  W A+++   +H
Sbjct: 412 IFKMPIEPTAAVWGALLAACRMH 434



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 207/436 (47%), Gaps = 32/436 (7%)

Query: 11  RRLCKLLP---LLQAH-RPLFSAAANSLQISPDCLENESREIDFDD-------------L 53
           R+  KLLP   LL  H RP  S AAN +  +   L    R++D  D              
Sbjct: 2   RKPHKLLPNYLLLYRHTRPYTSTAANPVPAASAVL----RDLDLLDAGELAPTPRVYHTF 57

Query: 54  FQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
             +C +   L   +++HA L  S      F    L++ Y   G +  +R  FD +  +++
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
            +W S+I+ Y +     EA+       L    +P+ +TF  +LKA     D   G++IH 
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGM-LKGRFKPNGFTFASLLKAAGAHADSGIGRQIHA 176

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             +K  +  DV+V ++LL MY R G+ ++A  +FD +  ++  SWNA+ISG+ + G+   
Sbjct: 177 LAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGET 236

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL    EM   G      T +S+    AR   +  G  +H +++K   +   F  N L++
Sbjct: 237 ALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLD 296

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK G M  A +VFD++ ++D+V+WN+++ A+ Q      A   F  M+++GI  + +T
Sbjct: 297 MYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVT 356

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEG 406
            + + +  +     +  +    F M + + +E  I     VV +  + G++N A      
Sbjct: 357 FLCILTACSHGGLVKEGKRY--FEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFK 414

Query: 407 LPVKDVIS-WNTLITG 421
           +P++   + W  L+  
Sbjct: 415 MPIEPTAAVWGALLAA 430



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 12/191 (6%)

Query: 44  ESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E+    +  +F S  +L      K +HA ++ S +  T F+   L++ YA  G +  +R 
Sbjct: 250 EATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARK 309

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            FD +  +++ TWN+M++ + + G   EAV  F +    SG+  +  TF  +L AC +  
Sbjct: 310 VFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMR-KSGIYLNQVTFLCILTACSHGG 368

Query: 159 LVDGKKIHCSVLK---LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNA 214
           LV   K +  ++K   L  E D FV  +++ +  R GL N A      MP+  + + W A
Sbjct: 369 LVKEGKRYFEMMKEYDLEPEIDHFV--TVVALLGRAGLLNFALVFIFKMPIEPTAAVWGA 426

Query: 215 MISGYCQSGNA 225
           +++      NA
Sbjct: 427 LLAACRMHKNA 437


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/724 (36%), Positives = 418/724 (57%), Gaps = 30/724 (4%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           I++R++ T  S+ ++Y++             F  TS    + +    +   CR L   ++
Sbjct: 19  IAHRDLRTGKSLHALYIK------------SFVPTSTYLSNHFLL--LYSKCRRLSAARR 64

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
               V     + +VF   +L+  Y +     VA +LFD+MP  DS S+N +I+ Y + G+
Sbjct: 65  ----VFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGD 120

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
              A  +  EMR   + MD  T++ I+  C  +  ++  L  H   V  GL+  + V N 
Sbjct: 121 TQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQL--HALSVVTGLDSYVSVGNA 178

Query: 285 LINMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           LI  Y+K G ++ A R+F  + E RD VSWNS++ AY Q  +   A   +  M   G+  
Sbjct: 179 LITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIV 238

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC-A 402
           D+ TL S+ +    + D       H  +++ G+  ++  +G+ ++D+Y+K G     C  
Sbjct: 239 DIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYH-QNSHVGSGLIDLYSKCGGCMLDCRK 297

Query: 403 VFEGLPVKDVISWNTLITGYA-QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
           VF+ +   D++ WNT+I+GY+    L+ EA+E F+ ++      P+  + V ++ A S++
Sbjct: 298 VFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGH-RPDDCSLVCVISACSNM 356

Query: 462 GALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            +  QG ++H   +K +     + V   L+ MY KCG + DA +LF  +P  ++V +N++
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  HG G ++L+ F++ML+    P +ITF+S+L AC+H+G V +G+ YF+MM+++FG
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I+P   H+ CM+DL GRAG L  A   I+ +P  P    W ALLGACRIHGN+EL   A+
Sbjct: 477 IEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAA 536

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +RL ++D  N   YV+++NIY++ G+ +    VR L RDRG+KK PG S IEVN ++ IF
Sbjct: 537 NRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIF 596

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD--KSFVLQD--VEEDEKEHILTSHSERL 756
              +  HP  +KI + L  +  K+K +GY P+   + V  D  V + E+E  L  HSE+L
Sbjct: 597 VAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKL 656

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           A++FG++S+    PI +FKNLR+C DCHN  K+IS++ +REI VRDS+RFH FKDG CSC
Sbjct: 657 AVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSC 716

Query: 817 GDYW 820
           G YW
Sbjct: 717 GGYW 720



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 266/543 (48%), Gaps = 21/543 (3%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           VFS   L++ YA    +  +   FD +   +  ++N++I+ Y R G    A   F +   
Sbjct: 74  VFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMR- 132

Query: 139 TSGLRPDFYTFPPVLKACR-NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
            + L  D +T   ++ AC  N+   +++H   +  G +  V V  +L+  Y + G    A
Sbjct: 133 EAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192

Query: 198 RKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           R++F  +   RD  SWN+M+  Y Q     +AL++  EM + G+ +D  T+AS+L     
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF-GMMRHALRVFDQMMERDVVSWNS 315
             ++L GL  H  ++K G   N  V + LI++Y+K  G M    +VFD++   D+V WN+
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312

Query: 316 IIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +I+ Y    D    A   F  +Q  G +PD  +LV + S  + ++     R VHG  ++ 
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                 + + NA++ MY+K G +  A  +F+ +P  + +S+N++I GYAQ+G+  +++ +
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDM 492
           FQ M E  +  P   T++S+L A +H G +  G KI+  ++K     +      +C++D+
Sbjct: 433 FQRMLEM-DFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDL 490

Query: 493 YGKCGRIDDAMSLFYQVPRSSS-VPWNAIISCHGIHGQGD---KALNFFRQMLDEGVRPD 548
            G+ G++ +A  L   +P       W+A++    IHG  +   KA N   Q+      P 
Sbjct: 491 LGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAP- 549

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
              +V L    S +G + +      +M++  G+K   K  GC      R  H+ +A +  
Sbjct: 550 ---YVMLANIYSDNGRLQDAASVRKLMRDR-GVK---KKPGCSWIEVNRRIHIFVAEDTF 602

Query: 609 QNM 611
             M
Sbjct: 603 HPM 605



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 197/416 (47%), Gaps = 11/416 (2%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-RNVYTWNSMISVYV 121
           +++LHAL VV+G    V     L+  Y+  G L  +R  F  +S  R+  +WNSM+  Y+
Sbjct: 157 IRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYM 216

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
           +    S+A++ + + T+  GL  D +T   VL A  N+ D   G + H  ++K G+  + 
Sbjct: 217 QHREGSKALELYLEMTV-RGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNS 275

Query: 179 FVAASLLHMYCRFGLANV-ARKLFDDMPVRDSGSWNAMISGYCQSGN-AVEALDILDEMR 236
            V + L+ +Y + G   +  RK+FD++   D   WN MISGY    + + EAL+   +++
Sbjct: 276 HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQ 335

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLINMYAKFGMM 295
             G   D  ++  ++  C+   +   G  +H   +K  +  N + V+N LI MY+K G +
Sbjct: 336 GVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNL 395

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           R A  +FD M E + VS+NS+IA Y Q      +   F  M +    P  +T +S+ +  
Sbjct: 396 RDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAAC 455

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVIS 414
           A      + +     + ++     +    + ++D+  + G ++ A  + E +P       
Sbjct: 456 AHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFX 515

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           W+ L+     +G    AI+    + + + +N     YV +   YS  G L+    +
Sbjct: 516 WSALLGACRIHGNVELAIKAANRLLQLDPLNA--APYVMLANIYSDNGRLQDAASV 569


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/762 (34%), Positives = 415/762 (54%), Gaps = 8/762 (1%)

Query: 64   KRLHALLVVSGKIKTV--FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
            + +H  +V SG +  +  F +  L+N Y  +G    +   FD +  RN+ ++ +++  + 
Sbjct: 448  RAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHA 507

Query: 122  RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGKKIHCSVLKLGFEWDV 178
              G   EA    +Q     G   + +    VLK   A   L     +H    KLG + + 
Sbjct: 508  LRGEFEEA-SALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNA 566

Query: 179  FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            FV ++L+  Y   G+ + AR++FD +  +D+ +W AM+S Y ++      L I  +MR+ 
Sbjct: 567  FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA 626

Query: 239  GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
               ++P  + S+L       +++ G  IH   VK   +    V   L++MYAK G +  A
Sbjct: 627  VSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDA 686

Query: 299  LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
               F+ +   DV+ W+ +I+ Y Q N    A   F  M ++ + P+  +L S+    A +
Sbjct: 687  RLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANM 746

Query: 359  NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                  + +H   ++ G    ++ +GNA++D+YAK   + S+  +F  L   + +SWNT+
Sbjct: 747  PLLDLGKQIHNHAIKIG-HESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTI 805

Query: 419  ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
            I GY+++G    A+ VF+ M   + +   Q TY S+L A +   ++    ++H  + K+ 
Sbjct: 806  IVGYSKSGFGEAALSVFREMRAAS-VPSTQVTYSSVLRACASTASINHVGQVHCLIEKST 864

Query: 479  LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
               D  V+  L+D Y KCG I DA  +F  +     V WNAIIS + +HGQ   A   F 
Sbjct: 865  FNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFD 924

Query: 539  QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
             M    ++ + ITFV+LL+ C  +GLVS+G   F  M+ + GI+P ++HY C+V L GRA
Sbjct: 925  MMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRA 984

Query: 599  GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
            G L  A NFI ++P  P A +W ALL +C +H N+ELG  +++++ E++ ++   YVL+S
Sbjct: 985  GRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLS 1044

Query: 659  NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
            N+Y+  G  + V   R   R+ G++K PG S +E+  +V  F  G+  HP    I   L 
Sbjct: 1045 NMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLE 1104

Query: 719  NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
             L  K    GYVPD   VL D+EE++K  +L  HSERLA+A+G++ +PP  PI+I KNLR
Sbjct: 1105 WLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLR 1164

Query: 779  VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             C DCH   K IS+I ++EIIVRD NRFHHF++G CSCGDYW
Sbjct: 1165 SCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 9/246 (3%)

Query: 360 DCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           D R  R+VHG ++R G     D+   N +++MY K+G   SA  VF+GLP ++++S+ TL
Sbjct: 443 DARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTL 502

Query: 419 ITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           + G+A  G   EA  +FQ +  E +E+  NQ    ++L     +  L     +HA   K 
Sbjct: 503 VQGHALRGEFEEASALFQRLRWEGHEV--NQFVLTTVLKLVVAMDTLGLAWGVHACACKL 560

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
               + FV + L+D Y  CG + DA  +F  +    +V W A++SC+  +   +  L  F
Sbjct: 561 GHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIF 620

Query: 538 RQMLDEGVRPDHITFVSLLTA--CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            +M     + +     S+L A  C  S ++ +G    H    +         YG ++D++
Sbjct: 621 SKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKG---IHACSVKTLYDTERHVYGALLDMY 677

Query: 596 GRAGHL 601
            + G++
Sbjct: 678 AKCGNI 683



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 45   SREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101
            S ++ +  + ++C     ++HV ++H L+  S        S  L++ YA  G +  +R  
Sbjct: 832  STQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREI 891

Query: 102  FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
            F+ +   ++ +WN++IS Y   G+ + A + F   +  S ++ +  TF  +L  C +   
Sbjct: 892  FETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNS-IKANDITFVALLSVCGSTGL 950

Query: 159  LVDGKKIHCSV-LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMI 216
            +  G  +  S+ L  G E  +     ++ +  R G  N A     D+P   S   W A++
Sbjct: 951  VSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALL 1010

Query: 217  S 217
            S
Sbjct: 1011 S 1011


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/691 (36%), Positives = 398/691 (57%), Gaps = 20/691 (2%)

Query: 143 RPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEW-DVFVAASLLHMYCRFGLANVAR 198
           RPD +TFP VLK C  L    +G+  H + ++LG    DV+   SLL  Y R GL + A 
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR--LEGVSMDPITVASILPVCAR 256
           ++FD MP RD  +WN+M+ GY  +G    AL    EM   LE V  D + + + L  C  
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALE-VQHDGVGIIAALAACCL 223

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              ++ G  +H Y+++HG+E ++ V  ++++MY K G +  A  VF  M  R VV+WN +
Sbjct: 224 ESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCM 283

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y  +  P  A   F  M+  G Q +++T ++L +  AQ       RSVHG+I RR  
Sbjct: 284 IGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRR-Q 342

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F+  V++  A+++MY+K+G + S+  VF  +  K ++SWN +I  Y    +  EAI +F 
Sbjct: 343 FLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLF- 401

Query: 437 MMEECNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
            ++  N+ + P+  T  +++PA+  +G LRQ  ++H+ +I+     +  +   ++ MY +
Sbjct: 402 -LDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYAR 460

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG +  +  +F ++     + WN +I  + IHGQG  AL  F +M   G+RP+  TFVS+
Sbjct: 461 CGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSV 520

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           LTACS SGL  EG   F+ MQ ++G+ P ++HYGCM DL GRAG L     FI+NMP+ P
Sbjct: 521 LTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDP 580

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDS-----ENVGYYVLMSNIYANVGKWEGV 670
              +WG+LL A R   ++++   A++R+F+++      +N G YVL+S++YA+ G+W+ V
Sbjct: 581 TFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDV 640

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
           + ++SL  ++GL++T   S +E++     F  G+ THP+ + I +    L+ K   +G +
Sbjct: 641 ERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGK---IGEM 697

Query: 731 PDKSFVLQDVEEDEKEHI-LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
            D          D +       HS RLA+ FG+IS+  ++PI + KN+R+C DCH+  K 
Sbjct: 698 RDPMNQSDPTSLDSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKL 757

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ + R I+V D+N +H F DG C CGDYW
Sbjct: 758 ISKYSGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 232/436 (53%), Gaps = 6/436 (1%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V++   L+ FYA LG +  +   FD +  R+V TWNSM+  YV  G  + A+ CF +   
Sbjct: 144 VYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHE 203

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
              ++ D       L AC     L+ G+++H  V++ G E DV V  S+L MYC+ G   
Sbjct: 204 ALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIA 263

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            A  +F  MP R   +WN MI GY  +    EA D   +M+ EG  ++ +T  ++L  CA
Sbjct: 264 SAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACA 323

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           ++++ L G  +H YI +     ++ +   L+ MY+K G ++ + +VF QM  + +VSWN+
Sbjct: 324 QTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNN 383

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +IAAY      + A   F  +    + PD  T+ ++      L   R  R +H +I+R G
Sbjct: 384 MIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLG 443

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
            + E+ +I NA++ MYA+ G + S+  +F+ +  KDVISWNT+I GYA +G    A+E+F
Sbjct: 444 -YGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMF 502

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQG-IKIHARVIKNCLCFDVFVATCLVDMYG 494
             M +CN + PN+ T+VS+L A S  G   +G  + ++      +   +    C+ D+ G
Sbjct: 503 SEM-KCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLG 561

Query: 495 KCGRIDDAMSLFYQVP 510
           + G + + M     +P
Sbjct: 562 RAGDLKEVMQFIENMP 577



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 170/345 (49%), Gaps = 2/345 (0%)

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           + +L+  +A  G M  A         RD    N +I     +  P  A   +  M  AG 
Sbjct: 45  TKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGA 104

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD  T   +    A+L      R+ H   +R G    DV  GN+++  YA+LG+++ A 
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+G+P +DV++WN+++ GY  NGL + A+  F+ M E  E+  +    ++ L A    
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL QG ++HA VI++ +  DV V T ++DMY KCG I  A  +F  +P  + V WN +I
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
             + ++ + ++A + F QM  EG + + +T ++LL AC+ +     G R  H        
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYG-RSVHGYITRRQF 343

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            PH+     +++++ + G +  +      M  +   S W  ++ A
Sbjct: 344 LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVS-WNNMIAA 387



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 187/417 (44%), Gaps = 18/417 (4%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L   + +HA ++  G    V   T +++ Y   GD++ +   F  +  R V TWN MI
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGF 174
             Y    R  EA DCF Q     G + +  T   +L AC    + + G+ +H  + +  F
Sbjct: 285 GGYALNERPEEAFDCFVQMK-AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQF 343

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
              V +  +LL MY + G    + K+F  M  +   SWN MI+ Y      +EA+ +  +
Sbjct: 344 LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLD 403

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLL-----IHLYIVKHGLEFNLFVSNNLINMY 289
           +  + +  D  T+++++P       +L GLL     +H YI++ G   N  + N +++MY
Sbjct: 404 LLNQPLYPDYFTMSAVVPAF-----VLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMY 458

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           A+ G +  +  +FD+M  +DV+SWN++I  Y       +A   F+ M+  G++P+  T V
Sbjct: 459 ARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFV 518

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S+ +  +         +    + R    +  +     + D+  + G +       E +P+
Sbjct: 519 SVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPI 578

Query: 410 KDVIS-WNTLITGYAQNG---LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
                 W +L+T         +A  A E    +E+    + N G YV I   Y+  G
Sbjct: 579 DPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAG 635


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/716 (36%), Positives = 410/716 (57%), Gaps = 47/716 (6%)

Query: 148 TFPPVLKAC---RNLVDGKKIH------------------------CSVL---KLGFEW- 176
           TF  +LKAC   R+L+ GK +H                        C  L   +  F+  
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 177 ---DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
              +VF   +L++ Y +  L ++AR++FD++P  D  S+N +I+ Y   G    AL +  
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           E+R     +D  T++ ++  C     ++  L  H ++V  G +    V+N ++  Y++ G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGDDVGLVRQL--HCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 294 MMRHALRVFDQMME---RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
            +  A RVF +M E   RD VSWN++I A  Q  + + A   F  M + G++ D+ T+ S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC-AVFEGLPV 409
           + +    + D       HG +++ G F  +  +G+ ++D+Y+K       C  VFE +  
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA 307

Query: 410 KDVISWNTLITGYAQ-NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            D++ WNT+I+G++Q   L+ + I  F+ M+  N  +P+  ++V +  A S++ +   G 
Sbjct: 308 PDLVLWNTMISGFSQYEDLSEDGIWCFREMQH-NGFHPDDCSFVCVTSACSNLSSPSVGK 366

Query: 469 KIHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
           ++HA  IK+ + ++ V V   LV MY KCG + DA  +F  +P  + V  N++I+ +  H
Sbjct: 367 QVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQH 426

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G   ++L  F  ML + + P+ ITF+++L+AC H+G V EGQ+YF+MM+E F I+P  +H
Sbjct: 427 GVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEH 486

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y CM+DL GRAG L  A   I+ MP  P +  W  LLGACR HGN+EL   A++   +++
Sbjct: 487 YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLE 546

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
             N   YV++SN+YA+  +WE    V+ L R+RG+KK PG S IE++ KV +F   + +H
Sbjct: 547 PYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSH 606

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVL---QDVEEDEKEHILTSHSERLAIAFGIIS 764
           P  ++I+  +  +  KMK  GYVPD  + L   ++VE DEKE  L  HSE+LA+AFG+IS
Sbjct: 607 PMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLIS 666

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +    PI + KNLR+CGDCHN  K IS IT REI VRD++RFH FK+G CSCGDYW
Sbjct: 667 TEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 282/587 (48%), Gaps = 57/587 (9%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F +L ++C     +   K LHAL   S    + + S      Y+  G L  ++ +FD   
Sbjct: 12  FRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQ 71

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTSGL------RP------- 144
           Y NV+++N++I+ Y +   +  A   F +          TL +        RP       
Sbjct: 72  YPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAE 131

Query: 145 --------DFYTFPPVLKACRNLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                   D +T   V+ AC + V   +++HC V+  G++    V  ++L  Y R G  N
Sbjct: 132 VRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191

Query: 196 VARKLFDDMPV---RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
            AR++F +M     RD  SWNAMI    Q    +EA+++  EM   G+ +D  T+AS+L 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK-FGMMRHALRVFDQMMERDVV 311
                 +++ G+  H  ++K G   N  V + LI++Y+K  G M    +VF+++   D+V
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLV 311

Query: 312 SWNSIIAAYEQSNDPITAHGF--FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
            WN++I+ + Q  D ++  G   F  MQ  G  PD  + V +TS  + L+     + VH 
Sbjct: 312 LWNTMISGFSQYED-LSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
             ++       V + NA+V MY+K G ++ A  VF+ +P  +++S N++I GYAQ+G+  
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--T 487
           E++ +F++M +  +I PN  T++++L A  H G + +G K +  ++K     +      +
Sbjct: 431 ESLRLFELMLQ-KDIAPNTITFIAVLSACVHTGKVEEGQK-YFNMMKERFRIEPEAEHYS 488

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD---KALNFFRQMLDE 543
           C++D+ G+ G++ +A  +   +P    S+ W  ++     HG  +   KA N F Q+   
Sbjct: 489 CMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPY 548

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
              P    +V L    + +    E      +M+E  G+K   K  GC
Sbjct: 549 NAAP----YVMLSNMYASAARWEEAATVKRLMRER-GVK---KKPGC 587



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 119/305 (39%), Gaps = 61/305 (20%)

Query: 64  KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           K++HAL + S      V  +  LV  Y+  G++  +R  FD +   N+ + NSMI+ Y +
Sbjct: 366 KQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQ 425

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAA 182
            G   E++  F +  L   + P+  TF  VL AC        +H   ++ G ++      
Sbjct: 426 HGVEVESLRLF-ELMLQKDIAPNTITFIAVLSAC--------VHTGKVEEGQKY------ 470

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
                       N+ ++ F   P  ++  ++ MI    ++G   EA  I++ M     S 
Sbjct: 471 -----------FNMMKERFRIEP--EAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGS- 516

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN------LINMYAKFGMMR 296
             I  A++L  C +  N+          VK   EF      N      L NMYA      
Sbjct: 517 --IEWATLLGACRKHGNVELA-------VKAANEFLQLEPYNAAPYVMLSNMYASAARWE 567

Query: 297 HALRVFDQMMERDV-----VSWNSI-----IAAYEQSNDPITAH------GFFTTMQQAG 340
            A  V   M ER V      SW  I     +   E ++ P+              M+QAG
Sbjct: 568 EAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAG 627

Query: 341 IQPDL 345
             PD+
Sbjct: 628 YVPDI 632


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/779 (34%), Positives = 411/779 (52%), Gaps = 47/779 (6%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S   ++  Y +   +  +R+ F+ +  RN+ +W  MIS Y R     +A D F + 
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-FG 192
               GL PD   F   L A +   NL   + +    LK GFE DV +  ++L++Y R   
Sbjct: 216 H-REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           + + A K F+ M  R+  +W+ MI+     G    A+ + +   ++ ++     +   L 
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LA 333

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVS-NNLINMYAKFGMMRHALRVFDQMMERDVV 311
            C R D+          I+   +   + VS N LI  Y + GM+  A  +FD+M  R+ +
Sbjct: 334 QCGRIDDA--------RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SW  +IA Y Q+     A G    + ++G+ P L +L S+    + +        VH   
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G         NA++ MY K   +  A  VF  +  KD++SWN+ +    QN L  EA
Sbjct: 446 VKVGCQFNSFAC-NALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504

Query: 432 IEVFQMM------------------EECNEIN------------PNQGTYVSILPAYSHV 461
              F  M                  E+ NE              PN      +L     +
Sbjct: 505 RNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSL 564

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GA + G +IH   IK  +  ++ VA  L+ MY KCG   D+  +F  +       WN II
Sbjct: 565 GASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTII 623

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +  HG G +A+  ++ M   GV P+ +TFV LL ACSH+GLV EG ++F  M +++G+
Sbjct: 624 TGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGL 683

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P  +HY CMVDL GR G +  A  FI +MP+ PD  IW ALLGAC+IH N E+G  A++
Sbjct: 684 TPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAE 743

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           +LF ++  N G YV++SNIY+++G W  V EVR + + +G+ K PG S  ++ +K+  F 
Sbjct: 744 KLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFV 803

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
           TG++ H + E+I   L  L   +K+ GYVPD  FVL D++E++KE  L  HSE+LA+A+ 
Sbjct: 804 TGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYC 863

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++P   PIQI KNLR+CGDCH + KF+S +T+R+I +RD NRFHHF++G CSC D+W
Sbjct: 864 LLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 258/578 (44%), Gaps = 75/578 (12%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V+  H  L VSG        +  +     LG +  +R  FD +  R++  WNSMIS Y  
Sbjct: 25  VRHAHGELEVSG-------CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCH 77

Query: 123 CGRLSEAVDCFYQFT---LTSG--LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWD 177
            G    A D +   +   + +G  L   +     VL+A R + DG            E +
Sbjct: 78  NGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEA-RRVFDGM----------LERN 126

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE---------- 227
                +++  Y + G   +AR+LFD MP RD  SWN+M++GYC S   V+          
Sbjct: 127 TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186

Query: 228 ---------------------ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
                                A DI  +M  EG+  D    AS L       N+     +
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL 246

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
            +  +K G E ++ +   ++N+Y++   ++  A++ F+ M+ER+  +W+++IAA      
Sbjct: 247 RVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAAL----- 301

Query: 326 PITAHGFFTTMQQAGIQPD-LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
              +HG       A  + D + ++   T+++  L  C   R     I+        V+  
Sbjct: 302 ---SHGGRIDAAIAVYERDPVKSIACRTALITGLAQC--GRIDDARILFEQIPEPIVVSW 356

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           NA++  Y + G++N A  +F+ +P ++ ISW  +I GYAQNG + EA+ + Q +     +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P+  +  SI  A S++ AL  G ++H+  +K    F+ F    L+ MYGKC  ++ A  
Sbjct: 417 -PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++     V WN+ ++    +   D+A N F  ML      D +++ ++++A +H+  
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQ 531

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            +E    F  M  E      L +   +  L G  G LG
Sbjct: 532 SNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSLG 565



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 17/173 (9%)

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
           G+ GR+ +A  +F  +PR   + WN++IS +  +G  D A + +  +    +R   I   
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI--- 101

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            LL+     G V E +R F  M E   +      +  M+  + + G + MA      MP 
Sbjct: 102 -LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFDAMPS 155

Query: 614 RPDASIWGALL-GACRIHGNMELGAVASDRLFE-VDSENVGYYVLMSNIYANV 664
           R D S W ++L G C       L  V +  LFE +   N+  + +M + Y  +
Sbjct: 156 R-DVSSWNSMLTGYCH-----SLQMVDARNLFEKMPERNLVSWTVMISGYGRI 202


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/779 (34%), Positives = 411/779 (52%), Gaps = 47/779 (6%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S   ++  Y +   +  +R+ F+ +  RN+ +W  MIS Y R     +A D F + 
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-FG 192
               GL PD   F   L A +   NL   + +    LK GFE DV +  ++L++Y R   
Sbjct: 216 H-REGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTS 274

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           + + A K F+ M  R+  +W+ MI+     G    A+ + +   ++ ++     +   L 
Sbjct: 275 VLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG-LA 333

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVS-NNLINMYAKFGMMRHALRVFDQMMERDVV 311
            C R D+          I+   +   + VS N LI  Y + GM+  A  +FD+M  R+ +
Sbjct: 334 QCGRIDDA--------RILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTI 385

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SW  +IA Y Q+     A G    + ++G+ P L +L S+    + +        VH   
Sbjct: 386 SWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLA 445

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++ G         NA++ MY K   +  A  VF  +  KD++SWN+ +    QN L  EA
Sbjct: 446 VKVGCQFNSFAC-NALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504

Query: 432 IEVFQMM------------------EECNEIN------------PNQGTYVSILPAYSHV 461
              F  M                  E+ NE              PN      +L     +
Sbjct: 505 RNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSL 564

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GA + G +IH   IK  +  ++ VA  L+ MY KCG   D+  +F  +       WN II
Sbjct: 565 GASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDLMEERDIFTWNTII 623

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +  HG G +A+  ++ M   GV P+ +TFV LL ACSH+GLV EG ++F  M +++G+
Sbjct: 624 TGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGL 683

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P  +HY CMVDL GR G +  A  FI +MP+ PD  IW ALLGAC+IH N E+G  A++
Sbjct: 684 TPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAE 743

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           +LF ++  N G YV++SNIY+++G W  V EVR + + +G+ K PG S  ++ +K+  F 
Sbjct: 744 KLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFV 803

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
           TG++ H + E+I   L  L   +K+ GYVPD  FVL D++E++KE  L  HSE+LA+A+ 
Sbjct: 804 TGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYC 863

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++P   PIQI KNLR+CGDCH + KF+S +T+R+I +RD NRFHHF++G CSC D+W
Sbjct: 864 LLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/578 (25%), Positives = 258/578 (44%), Gaps = 75/578 (12%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V+  H  L VSG        +  +     LG +  +R  FD +  R++  WNSMIS Y  
Sbjct: 25  VRHAHGELEVSG-------CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCH 77

Query: 123 CGRLSEAVDCFYQFT---LTSG--LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWD 177
            G    A D +   +   + +G  L   +     VL+A R + DG            E +
Sbjct: 78  NGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEA-RRVFDGM----------LERN 126

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE---------- 227
                +++  Y + G   +AR+LFD MP RD  SWN+M++GYC S   V+          
Sbjct: 127 TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPE 186

Query: 228 ---------------------ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
                                A DI  +M  EG+  D    AS L       N+     +
Sbjct: 187 RNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESL 246

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
            +  +K G E ++ +   ++N+Y++   ++  A++ F+ M+ER+  +W+++IAA      
Sbjct: 247 RVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAAL----- 301

Query: 326 PITAHGFFTTMQQAGIQPD-LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
              +HG       A  + D + ++   T+++  L  C   R     I+        V+  
Sbjct: 302 ---SHGGRIDAAIAVYERDPVKSIACRTALITGLAQC--GRIDDARILFEQIPEPIVVSW 356

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           NA++  Y + G++N A  +F+ +P ++ ISW  +I GYAQNG + EA+ + Q +     +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P+  +  SI  A S++ AL  G ++H+  +K    F+ F    L+ MYGKC  ++ A  
Sbjct: 417 -PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQ 475

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++     V WN+ ++    +   D+A N F  ML      D +++ ++++A +H+  
Sbjct: 476 VFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAHAEQ 531

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            +E    F  M  E      L +   +  L G  G LG
Sbjct: 532 SNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSLG 565



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 17/173 (9%)

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
           G+ GR+ +A  +F  +PR   + WN++IS +  +G  D A + +  +    +R   I   
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAI--- 101

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            LL+     G V E +R F  M E   +      +  M+  + + G + MA      MP 
Sbjct: 102 -LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARRLFDAMPS 155

Query: 614 RPDASIWGALL-GACRIHGNMELGAVASDRLFE-VDSENVGYYVLMSNIYANV 664
           R D S W ++L G C       L  V +  LFE +   N+  + +M + Y  +
Sbjct: 156 R-DVSSWNSMLTGYCH-----SLQMVDARNLFEKMPERNLVSWTVMISGYGRI 202


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/661 (38%), Positives = 389/661 (58%), Gaps = 14/661 (2%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYC 220
           +++H   LK       FV++ LL +Y    + ++  AR +FD +  R    WN +I  Y 
Sbjct: 30  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           ++  + + + +  E+  E +  D  T+  ++  CAR   +  G  IH   +K G   ++F
Sbjct: 90  ENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +L+NMY+K G +  A +VFD M+++DVV WNS+I  Y +  +   A   F  M +  
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER- 207

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
                    S T +V  L+ C    S      +      +++  NA+++ Y K G  +SA
Sbjct: 208 ------DAFSWTVLVDGLSKCGKVESARKLFDQMP--CRNLVSWNAMINGYMKSGDFDSA 259

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +F  +P+ D+++WN +I GY  NG   +A+++F MM +     P+  T VS+L A S 
Sbjct: 260 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS-RPSHATLVSVLSAVSG 318

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +  L +G  IH+ + KN    D  + T L++MY KCG I+ A+++F  + +     W AI
Sbjct: 319 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAI 378

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I   GIHG  + AL  F +M   G++P+ I F+ +L AC+H+GLV +G++YF MM  E+ 
Sbjct: 379 IVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYK 438

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I+P L+HYGC+VD+  RAGHL  A N I+NMP+ P+  IW +LLG  R HG +++G  A+
Sbjct: 439 IEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAA 498

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
            R+ EV  E +G Y+L+SN+YA  G WE V  VR +   RG +K PG SS+E    +  F
Sbjct: 499 QRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEF 558

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE-EDEKEHILTSHSERLAIA 759
             G+ +HP+ ++IY ++  +  K+K +G+VPD + VL  +E E EKE  L +HSERLAIA
Sbjct: 559 IVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIA 618

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG+I+  P  PI+I KNLRVC DCH+ TK +S+I  REIIVRD+ RFHHFK+G CSC DY
Sbjct: 619 FGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDY 678

Query: 820 W 820
           W
Sbjct: 679 W 679



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 275/571 (48%), Gaps = 33/571 (5%)

Query: 47  EIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDH 104
           E+ F D          V++LHA  + +      F S++L+  Y++  + DL ++R  FD 
Sbjct: 13  ELGFADQRMGLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDR 72

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VD 161
           I  R++  WN++I  YV      + +  F++  L     PD +T P V+K C  L    +
Sbjct: 73  IQRRSLIHWNTIIKCYVENQFSHDGIVLFHE--LVHEYLPDNFTLPCVIKGCARLGVVQE 130

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK+IH   LK+GF  DVFV  SL++MY + G  + ARK+FD M  +D   WN++I GY +
Sbjct: 131 GKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYAR 190

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G    AL + +EM  E  +     +   L  C + ++          +       NL  
Sbjct: 191 CGEIDIALQLFEEMP-ERDAFSWTVLVDGLSKCGKVESARK-------LFDQMPCRNLVS 242

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N +IN Y K G    AL +F QM   D+V+WN +IA YE +   + A   F  M + G 
Sbjct: 243 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 302

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P   TLVS+ S V+ L      R +H ++ + G F  D I+G ++++MYAK G I SA 
Sbjct: 303 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG-FELDGILGTSLIEMYAKCGCIESAL 361

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSH 460
            VF  +  K V  W  +I G   +G+A+ A+ +F  +E C   + PN   ++ +L A +H
Sbjct: 362 TVFRAIQKKKVGHWTAIIVGLGIHGMANHALALF--LEMCKTGLKPNAIIFIGVLNACNH 419

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPW 517
            G +  G + +  ++ N    +  +    CLVD+  + G +++A +    +P S + V W
Sbjct: 420 AGLVDDG-RQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIW 478

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
            +++     HG+ D      +++++  V P+ I    LL+    +  + E   +   M  
Sbjct: 479 MSLLGGSRNHGKIDIGEYAAQRVIE--VAPETIGCYILLSNMYAASGMWEKVSHVREMMY 536

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
           + G +   K  GC         H G  H FI
Sbjct: 537 KRGFR---KDPGC-----SSVEHKGTLHEFI 559


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/740 (35%), Positives = 398/740 (53%), Gaps = 42/740 (5%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++ YANLG+L  +R  F+     N  TW+S++S Y + G   E +  F Q   + G +P
Sbjct: 74  MISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQKP 132

Query: 145 DFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
             YT   VL+AC  L     GK IHC  +K+  E ++FVA  L+ MY +      A  LF
Sbjct: 133 SQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLF 192

Query: 202 DDMPVRDSG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
             +P R +   W AM++GY Q+G +++A+    EMR +G+  +  T  SIL  C      
Sbjct: 193 FSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAY 252

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H  I+  G   N++V + L++MYAK G +  A  + D M   DVV WNS+I   
Sbjct: 253 AFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGC 312

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
                   A   F  M    I+ D  T  S+   +A   + +   SVH   ++ G F   
Sbjct: 313 VTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTG-FDAC 371

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
             + NA+VDMYAK G ++ A  VF  +  KDVISW +L+TGY  NG   +A+++F  M  
Sbjct: 372 KTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRT 431

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              ++ +Q     +  A + +  +  G ++HA  IK+     +     L+ MY KCG ++
Sbjct: 432 A-RVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLE 490

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA+ +   +   + + W AII                                      +
Sbjct: 491 DAIRVXDSMETRNVISWTAII-----------------------------------VGYA 515

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
            +GLV  GQ YF  M++ +GIKP    Y CM+DL GRAG +  A + +  M V PDA+IW
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIW 575

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
            +LL ACR+HGN+ELG  A   L +++  N   YVL+SN+++  G+WE    +R   +  
Sbjct: 576 KSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTM 635

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+ + PG+S IE+ ++V  F + +R+HP   +IY ++  +   +K  G+VPD +F L+D+
Sbjct: 636 GIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDM 695

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           +E+ KE  L  HSE+LA+AFG+++    +PI+IFKNLRVCGDCH+  K+IS I +R II+
Sbjct: 696 DEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIIL 755

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD N FHHF +G CSCGD+W
Sbjct: 756 RDLNCFHHFIEGKCSCGDFW 775



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 225/485 (46%), Gaps = 36/485 (7%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI--------------------------- 216
           LL    + G  + ARKLFD MP RD  +WN MI                           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITW 102

Query: 217 ----SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
               SGYC++G  VE L    +M  +G      T+ S+L  C+    + +G +IH Y +K
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIK 162

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHG 331
             LE N+FV+  L++MY+K   +  A  +F  + +R + V W +++  Y Q+ + + A  
Sbjct: 163 IQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQ 222

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  M+  G++ +  T  S+ +    ++     R VHG I+  G F  +V + +A+VDMY
Sbjct: 223 CFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSG-FGPNVYVQSALVDMY 281

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G + SA  + + + + DV+ WN++I G   +G   EA+ +F  M    +I  +  TY
Sbjct: 282 AKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHN-RDIRIDDFTY 340

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+L + +    L+ G  +H+  IK        V+  LVDMY K G +  A+ +F ++  
Sbjct: 341 PSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILD 400

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              + W ++++ +  +G  +KAL  F  M    V  D      + +AC+   ++  G R 
Sbjct: 401 KDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFG-RQ 459

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    +      L     ++ ++ + G L  A     +M  R   S W A++     +G
Sbjct: 460 VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVIS-WTAIIVGYAQNG 518

Query: 632 NMELG 636
            +E G
Sbjct: 519 LVETG 523



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 160/307 (52%), Gaps = 8/307 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           ES    F  +  +CT +      +++H  ++ SG    V+  + LV+ YA  GDL+ +R 
Sbjct: 233 ESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARM 292

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACR 157
             D +   +V  WNSMI   V  G + EA+  F++      +R D +T+P VLK   +C+
Sbjct: 293 ILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMH-NRDIRIDDFTYPSVLKSLASCK 351

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           NL  G+ +H   +K GF+    V+ +L+ MY + G  + A  +F+ +  +D  SW ++++
Sbjct: 352 NLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVT 411

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY  +G   +AL +  +MR   V +D   VA +   CA    I  G  +H   +K     
Sbjct: 412 GYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGS 471

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            L   N+LI MYAK G +  A+RV D M  R+V+SW +II  Y Q+    T   +F +M+
Sbjct: 472 LLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESME 531

Query: 338 QA-GIQP 343
           +  GI+P
Sbjct: 532 KVYGIKP 538



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 172/375 (45%), Gaps = 36/375 (9%)

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF--------- 332
           SN L++  +K G +  A ++FDQM  RD  +WN +I+AY    + + A            
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNS 99

Query: 333 ----------------------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
                                 F+ M   G +P   TL S+    + L+     + +H +
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLAS 429
            ++      ++ +   +VDMY+K   +  A  +F  LP  K+ + W  ++TGYAQNG + 
Sbjct: 160 AIKIQ-LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESL 218

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           +AI+ F+ M     +  N  T+ SIL A + + A   G ++H  +I +    +V+V + L
Sbjct: 219 KAIQCFKEMRN-QGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSAL 277

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KCG +  A  +   +     V WN++I     HG  ++AL  F +M +  +R D 
Sbjct: 278 VDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDD 337

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
            T+ S+L + +    +  G+   H +  + G          +VD++ + G+L  A + + 
Sbjct: 338 FTYPSVLKSLASCKNLKIGES-VHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALD-VF 395

Query: 610 NMPVRPDASIWGALL 624
           N  +  D   W +L+
Sbjct: 396 NKILDKDVISWTSLV 410


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/782 (33%), Positives = 426/782 (54%), Gaps = 20/782 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG--DLSFSRHTFDHISYRNVY 111
            +SC  L     +H  +  +    ++F    L+  Y  LG  D   +R   D +  RN  
Sbjct: 20  LRSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAV 79

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCS 168
           ++N +I  Y R G+  E+++ F      + ++ D +T+   L AC     L +GK +H  
Sbjct: 80  SFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHAL 139

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            +  G    VFV+ SL+ MY R G    AR++FD    RD  SWN+++SGY + G   E 
Sbjct: 140 AVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEM 199

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNLI 286
           L +   MR   + ++   + S++  C+  D  + G+   +H  +VK GL+ +LF+++ ++
Sbjct: 200 LRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMV 259

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI------TAHGFFTTMQQAG 340
           +MYAK G +  A+ +F  +++ +VV +N++IA   +    +       A   ++ +Q  G
Sbjct: 260 DMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRG 319

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++P   T  S+        D    + +HG +++   F  D  IG+A++D+Y     +   
Sbjct: 320 MEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKH-CFQGDDFIGSALIDLYFNSACMEDG 378

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
              F  +P +DV++W  +I+G  QN L   A+ +F  +     + P+  T  S++ A + 
Sbjct: 379 FRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVG-LKPDPFTISSVMNACAS 437

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +  +R G ++     K+   FD F A     + MY + G ++ A+  F ++     V W+
Sbjct: 438 LAVVRTGEQMQCFATKSG--FDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWS 495

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           AIIS H  HG   +AL FF +M+   V P+ ITF+ +LTACSH GLV EG RY+ +M+ E
Sbjct: 496 AIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKME 555

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +G+ P +KH  C+VDL GRAG L  A  FI++     +  +W +LLG+CRIH +ME G +
Sbjct: 556 YGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQL 615

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            +DR+ E+   + G YV + N+Y + G+     ++R L ++RG+KK PG S IE+ + + 
Sbjct: 616 VADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIH 675

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+++HP+   IY +L  + +K+  L    D S +        +++ +  HSE+LA+
Sbjct: 676 SFVAGDKSHPECNAIYTKLAEMLSKIDKL-TTTDTSCIEWVETTGREQNWMNCHSEKLAV 734

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           A GII  P  +PI++ KNLRVC DCH+  K IS+   REII+RD  RFHHF+DG CSCGD
Sbjct: 735 ALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGD 794

Query: 819 YW 820
           YW
Sbjct: 795 YW 796


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/601 (40%), Positives = 370/601 (61%), Gaps = 7/601 (1%)

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           N+   L +LD +    +  D      +L  C     +  G L+H +++      +L + N
Sbjct: 71  NSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKN 130

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ---SNDPITAHGFFTTMQQAG 340
           +++ MYAK G +  A +VFD+M  +DVV+W S+I  Y Q   ++   TA   F  M + G
Sbjct: 131 SILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDG 190

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++P+   L SL      L  C + + +HG   + G F E+V +G+++VDMYA+ G +  +
Sbjct: 191 LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYG-FQENVFVGSSLVDMYARCGELRES 249

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF+ L  K+ +SWN LI+G+A+ G   EA+ +F  M+        + TY ++L + S 
Sbjct: 250 RLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQR-EGFGATEFTYSALLCSSST 308

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            G+L QG  +HA ++K+      +V   L+ MY K G I DA  +F ++ +   V  N++
Sbjct: 309 TGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSM 368

Query: 521 ISCHGIHGQGDKALNFFRQM-LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +  +  HG G +A+  F +M L   + P+ ITF+S+LTACSH+GL+ EG  YF +M++ +
Sbjct: 369 LIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-Y 427

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           G++P L HY  +VDLFGRAG L  A +FI+ MP+ P+A+IWGALLGA ++H N E+GA A
Sbjct: 428 GLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYA 487

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           + ++ E+D    G + L+SNIYA+ G+W+ V +VR   +D GLKK P  S +E+ N V I
Sbjct: 488 AQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHI 547

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F   + +HP+  K+Y+   NL  K+K +GYVPD S V   V++ EKE  L  HSE+LA+A
Sbjct: 548 FSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALA 607

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           F ++++ P S I+I KN+RVCGDCH+  K++S + +REIIVRD+NRFHHF+DG CSC DY
Sbjct: 608 FALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDY 667

Query: 820 W 820
           W
Sbjct: 668 W 668



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 224/453 (49%), Gaps = 28/453 (6%)

Query: 39  DCLENESREID---FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL 92
           D + N S E D   ++ L + CT   KL   K +H  L+ S     +     ++  YA  
Sbjct: 80  DLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF--TLTSGLRPDFYTFP 150
           G L  +R  FD +  ++V TW SMI+ Y + G  S A      F   +  GLRP+ +   
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALS 199

Query: 151 PVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            ++K C  L   VDGK+IH    K GF+ +VFV +SL+ MY R G    +R +FD++  +
Sbjct: 200 SLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK 259

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +  SWNA+ISG+ + G   EAL +  +M+ EG      T +++L   + + ++  G  +H
Sbjct: 260 NEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLH 319

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            +++K G +   +V N L++MYAK G +  A +VFD++++ DVVS NS++  Y Q     
Sbjct: 320 AHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGK 379

Query: 328 TAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNS----RSVHGFIMRRGWFMEDVI 382
            A   F  M     I+P+ +T +S+      L  C ++      ++ F + + + +E  +
Sbjct: 380 EAVELFEEMMLWVEIEPNDITFLSV------LTACSHAGLLDEGLYYFELMKKYGLEPKL 433

Query: 383 IG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEE 440
                VVD++ + G+++ A +  E +P++ +   W  L+     +          Q + E
Sbjct: 434 SHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLE 493

Query: 441 CNEINPNQGTYVSILPA----YSHVGALRQGIK 469
            +   P   T +S + A    +  V  +R+ +K
Sbjct: 494 LDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMK 526


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/573 (41%), Positives = 353/573 (61%), Gaps = 3/573 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           AS+L  C     I  G  +H  I + G+ FN  ++  L+N+Y     + +A  +FD++ +
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R++  WN +I  Y  +     A   +  M+  G+ PD  T   +    + L+     + +
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H  ++R G    DV +G A++DMYAK G + SA  VF+ +  +DV+ WN+++  Y+QNG 
Sbjct: 125 HKDVIRSG-LESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
             E++ + ++M   N + P +GT+V  + A +  G L QG ++H    ++    +  V T
Sbjct: 184 PDESLALCRVMA-FNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+DMY K G ++ A SLF  +     V WNA+I+ + +HG  ++AL+ F++M  + V P
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLP 301

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           DHITFV +L ACSH GL++EG+ +F  M  +F I P ++HY CM+DL G  G L  A+  
Sbjct: 302 DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I  M V PDA +WGALL +C+IHGN+E+G +A ++L E++ ++ G YV++SN+YA  GKW
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKW 421

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           +GV  +R L  ++GLKK+   S IEV NKV  F + + +HPK E IY EL+     MK  
Sbjct: 422 DGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEA 481

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GY P    V  DVE+DEK  +++ HSERLAIAFG+IS+   + + I KNLR+C DCH   
Sbjct: 482 GYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAI 541

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KFIS+ITEREI +RD NR+HHFKDG+CSCGD+W
Sbjct: 542 KFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 214/389 (55%), Gaps = 14/389 (3%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +L++C   + +  GK++H  + ++G  ++  +A  L+++YC       A  LFD + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R+   WN MI GY  +G    A+ +  +MR  G+  D  T   +L  C+    +  G  
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  +++ GLE ++FV   LI+MYAK G +  A +VFD++ ERDVV WNS++A Y Q+  
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
           P  +      M   G++P   T V   +  A        + +HG+  R G F  +  +  
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHG-FESNDKVKT 242

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A++DMYAK G +N A ++FE L  K V+SWN +ITGYA +G A+EA+++F+ M+   ++ 
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK--GKVL 300

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDD 501
           P+  T+V +L A SH G L +G K+H R + +   F+++      TC++D+ G CGR+++
Sbjct: 301 PDHITFVGVLAACSHGGLLNEG-KMHFRSMIS--DFNIWPTVQHYTCMIDLLGHCGRLEE 357

Query: 502 AMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
           A  L  ++     +  W A++    IHG 
Sbjct: 358 AYKLIMEMRVEPDAGVWGALLHSCKIHGN 386



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 206/435 (47%), Gaps = 41/435 (9%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L QSC     +   K+LHA +   G       +TKLVN Y     L+ +   FD IS
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            RN++ WN MI  Y   G    A+  +YQ     GL PD +TFP VLKAC  L    +GK
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMR-DYGLVPDKFTFPFVLKACSALSAMEEGK 122

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           KIH  V++ G E DVFV A+L+ MY + G    AR++FD +  RD   WN+M++ Y Q+G
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL--SGLLIHLYIVKHGLEFNLFV 281
              E+L +   M   G  + P     ++ + A +DN L   G  +H Y  +HG E N  V
Sbjct: 183 QPDESLALCRVMAFNG--LKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
              L++MYAK G +  A  +F+ + E+ VVSWN++I  Y        A   F  M +  +
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKV 299

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDM 390
            PD +T V + +  +           HG ++  G      +I +            ++D+
Sbjct: 300 LPDHITFVGVLAACS-----------HGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDL 348

Query: 391 YAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINPNQ 448
               G +  A  +   + V+ D   W  L+     +G     +E+ ++ +E+  E+ P+ 
Sbjct: 349 LGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHG----NVEMGELALEKLVELEPDD 404

Query: 449 -GTYVSILPAYSHVG 462
            G YV +   Y+  G
Sbjct: 405 GGNYVILSNMYAQAG 419



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 2/182 (1%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           Y S+L +     A+  G ++HAR+ +  + F+  +AT LV++Y  C  + +A  LF ++ 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
           + +   WN +I  +  +G  + A++ + QM D G+ PD  TF  +L ACS    + EG++
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
             H      G++  +     ++D++ + G +  A      +  R D   W ++L     +
Sbjct: 124 -IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER-DVVCWNSMLATYSQN 181

Query: 631 GN 632
           G 
Sbjct: 182 GQ 183


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/701 (36%), Positives = 399/701 (56%), Gaps = 23/701 (3%)

Query: 138 LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           LT G       + P+L  C    +L   + +H  + K G   D+FVA SL++ Y R G A
Sbjct: 70  LTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAA 129

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR+LFD MP R+  +W A+++GY  +      L++  EM   G      T+ + L  C
Sbjct: 130 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 189

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
             S ++  G  +H Y +K+G E    + N+L ++YAK G +  ALR F ++ E++V++W 
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 249

Query: 315 SIIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           ++I+A  +  + +      F  M   G+ P+  TL S+ S+     D    + V  F  +
Sbjct: 250 TMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 309

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ--------- 424
            G    ++ + N+ + +Y + G  + A  +FE +    +I+WN +I+GYAQ         
Sbjct: 310 IGC-ETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 425 --NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
                  +A+ +F+ ++  + + P+  T+ SIL   S + AL QG +IHA+ IK+    D
Sbjct: 369 QARSRGFQALTIFRDLKR-SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V V + LV+MY KCG I DA   F ++P  + V W ++IS +  HGQ  +A+  F +M  
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 487

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            GVRP+ ITFVSLL+ACS++GLV E + YF MM++E+ I+P + HYGCM+D+F R G + 
Sbjct: 488 AGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE 547

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A +FI+     P+ +IW +L+  CR HGNMEL   A+D+L E+  + +  Y+L+ N+Y 
Sbjct: 548 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYI 607

Query: 663 NVGKWEGVDEVRSLAR--DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           +  +W+ V  VR L +  D G+ +   W  I + +KV  F   +RTHP+  ++Y  L NL
Sbjct: 608 STERWQDVARVRKLMKQEDVGILRDRSW--ITIKDKVYFFRANDRTHPQATELYQLLENL 665

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHI--LTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
             K K++GY P ++  L D E+DEK     L  HSERLA+A G++ +PP + +++ KN+ 
Sbjct: 666 LEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNIT 725

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           +C DCH+  K  S +  REIIVRDS R H FKDG CSCGD+
Sbjct: 726 MCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 277/545 (50%), Gaps = 32/545 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   + +H  +  +G    +F +T LVN Y   G    +R  FD +  RNV TW ++++ 
Sbjct: 94  LGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTG 153

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y    + +  ++ F +  L  G  P  YT    L AC    D   GK++H   +K G E 
Sbjct: 154 YTLNSQPALGLEVFVEM-LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 212

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEM 235
              +  SL  +Y + G  + A + F  +P ++  +W  MIS   +    VE  L +  +M
Sbjct: 213 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDM 272

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            ++GV  +  T+ S++ +C    ++  G  +  +  K G E NL V N+ + +Y + G  
Sbjct: 273 LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGET 332

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQ----SNDPITA--HGF-----FTTMQQAGIQPD 344
             A+R+F+QM +  +++WN++I+ Y Q    + D + A   GF     F  ++++ ++PD
Sbjct: 333 DEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPD 392

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T  S+ S+ + +        +H   ++ G F+ DV++ +A+V+MY K G I  A   F
Sbjct: 393 LFTFSSILSVCSAMMALEQGEQIHAQTIKSG-FLSDVVVNSALVNMYNKCGCIQDANKAF 451

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P +  ++W ++I+GY+Q+G   EAI++F+ M     + PN+ T+VS+L A S+ G +
Sbjct: 452 LEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG-VRPNEITFVSLLSACSYAGLV 510

Query: 465 RQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP----WN 518
            +  + +  ++K   C +  V    C++DM+ + GR++DA S    + R+   P    W+
Sbjct: 511 EEA-EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF---IKRTGFEPNEAIWS 566

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMM-Q 576
           ++++    HG  + A     ++L+  ++P  I T++ LL     +    +  R   +M Q
Sbjct: 567 SLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILLLNMYISTERWQDVARVRKLMKQ 624

Query: 577 EEFGI 581
           E+ GI
Sbjct: 625 EDVGI 629



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 205/429 (47%), Gaps = 24/429 (5%)

Query: 223 GNAVEA----LDILDEMRL--EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           G  +EA    LD+ + M +  EG ++       +L  C    ++ +   +H ++ K G  
Sbjct: 51  GGGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAG 110

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++FV+ +L+N Y + G  R A R+FD M ER+VV+W +++  Y  ++ P      F  M
Sbjct: 111 ADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM 170

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLG 395
            + G  P   TL +  +      D    + VHG+ ++ G   E +  +GN++  +YAKLG
Sbjct: 171 LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYG--AESITSMGNSLCSLYAKLG 228

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASE-AIEVFQMMEECNEINPNQGTYVSI 454
            ++SA   F  +P K+VI+W T+I+  A++    E  + +F  M   + + PN+ T  S+
Sbjct: 229 SLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDM-LMDGVMPNEFTLTSV 287

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           +        L  G ++ A   K     ++ V    + +Y + G  D+AM LF Q+  +S 
Sbjct: 288 MSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASI 347

Query: 515 VPWNAIISCHG-----------IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           + WNA+IS +               +G +AL  FR +    ++PD  TF S+L+ CS   
Sbjct: 348 ITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMM 407

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            + +G++  H    + G    +     +V+++ + G +  A+     MP R   + W ++
Sbjct: 408 ALEQGEQ-IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT-WTSM 465

Query: 624 LGACRIHGN 632
           +     HG 
Sbjct: 466 ISGYSQHGQ 474



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   C+    L   +++HA  + SG +  V  ++ LVN Y   G +  +   F  + 
Sbjct: 396 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKK 164
            R   TW SMIS Y + G+  EA+  F +  L +G+RP+  TF  +L AC    LV+  +
Sbjct: 456 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL-AGVRPNEITFVSLLSACSYAGLVEEAE 514

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFG-----LANVARKLFDDMPVRDSGSWNAMIS 217
            +  ++K  +  +  V     ++ M+ R G      + + R  F+     +   W+++++
Sbjct: 515 HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP----NEAIWSSLVA 570

Query: 218 GYCQSGN---AVEALDILDEMRLEGV 240
           G    GN   A  A D L E++ +G+
Sbjct: 571 GCRSHGNMELAFYAADKLLELKPKGI 596


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/590 (40%), Positives = 358/590 (60%), Gaps = 8/590 (1%)

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           ++ M    +S D IT + ++  C     +    L+H ++  +G E   F+ N LINMY K
Sbjct: 4   MEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVK 63

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           FG++  A  +FD+M +R+VVSW ++I+AY  SN    A  F   M + G++P++ T    
Sbjct: 64  FGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY--- 120

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
           +S++   +   N R +HG I++ G    DV + +A++D Y+KLG  + A  VF  +   D
Sbjct: 121 SSVLRACDGLLNLRQLHGSILKVG-LESDVFVRSALIDTYSKLGEQHDALNVFNEMITGD 179

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           ++ WN++I G+AQN    E + +++ M+  + +  +Q T  S+L A + +  L  G ++H
Sbjct: 180 LVVWNSIIGGFAQNSDGDETLHLYKRMKRADFV-ADQSTLTSVLRACTGLALLELGRQVH 238

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQG 530
             V+K     D+ +   L+DMY KCG ++DA  LF ++     V  W+ +I+    +G  
Sbjct: 239 VHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFS 296

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
             AL  F  M  +G +P++IT + +L ACSH+GLV++G  YF  M+E FGI P  +HYGC
Sbjct: 297 ADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGC 356

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           ++DL GRAG L  A   I  M   PDA  W  LLGACR+H N++L   A+  + ++D  +
Sbjct: 357 IIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPAD 416

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
            G Y+L+SNIYAN  KWE V EVR   R RG+KK PG S IEV+ +V  F  G+ +HP+ 
Sbjct: 417 AGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRI 476

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           E+I  EL  L  ++  LGYVPD +FVLQD+E ++ E  L  HSE+LAI FG++S P +  
Sbjct: 477 EEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKT 536

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I I KNLR+CGDCH + K +SQ+  R I++RD  R+HHF+ G+CSCGDYW
Sbjct: 537 IHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 34/430 (7%)

Query: 48  IDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I + +L + C     +   + +H  +  +G     F    L+N Y   G L  +R+ FD 
Sbjct: 17  ITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDE 76

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           +  RNV +W +MIS Y       +A+D F    L  G+RP+ YT+  VL+AC  L++ ++
Sbjct: 77  MPDRNVVSWTTMISAYSNSNLNHKALD-FLILMLREGVRPNMYTYSSVLRACDGLLNLRQ 135

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H S+LK+G E DVFV ++L+  Y + G  + A  +F++M   D   WN++I G+ Q+ +
Sbjct: 136 LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSD 195

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             E L +   M+      D  T+ S+L  C     +  G  +H++++K+  + +L ++N 
Sbjct: 196 GDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKY--DQDLILNNA 253

Query: 285 LINMYAKFGMMRHALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           L++MY K G +  A  +F +MM E+DV+SW+++IA   Q+     A   F  M+  G +P
Sbjct: 254 LLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKP 313

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDMYA 392
           + +T      I+  L  C      H  ++  GW+    +  +            ++D+  
Sbjct: 314 NYIT------ILGVLFACS-----HAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLG 362

Query: 393 KLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGT 450
           + G ++ A  +   +  + D ++W  L+     +     AI      +E  +++P + GT
Sbjct: 363 RAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYA---AKEILKLDPADAGT 419

Query: 451 YVSILPAYSH 460
           Y+ +   Y++
Sbjct: 420 YILLSNIYAN 429


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/679 (36%), Positives = 390/679 (57%), Gaps = 11/679 (1%)

Query: 152 VLKAC--RNLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+ C  + L D G ++HC +LK G   ++  +  L+ MYC+     +A K+FD MP R+
Sbjct: 12  ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW+A++SG+  +G+   +L +  EM  +G+  +  T ++ L  C   + +  GL IH 
Sbjct: 72  VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           + +K G E  + V N+L++MY+K G +  A +VF ++++R ++SWN++IA +  +     
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191

Query: 329 AHGFFTTMQQAGIQ--PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM-EDVIIGN 385
           A   F  MQ+A I+  PD  TL SL    +        + +HGF++R G+       I  
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           ++VD+Y K G + SA   F+ +  K +ISW++LI GYAQ G   EA+ +F+ ++E N   
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-Q 310

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
            +     SI+  ++    LRQG ++ A  +K     +  V   +VDMY KCG +D+A   
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++     + W  +I+ +G HG G K++  F +ML   + PD + ++++L+ACSHSG++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG+  F  + E  GIKP ++HY C+VDL GRAG L  A + I  MP++P+  IW  LL 
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
            CR+HG++ELG      L  +D++N   YV+MSN+Y   G W      R L   +GLKK 
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDE 744
            G S +E+  +V  F +G  +HP    I + L+    +++  LGYV      L D++++ 
Sbjct: 551 AGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDES 610

Query: 745 KEHILTSHSERLAIAFGIIS---SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           KE  L +HSE+LAI   + +   +     I++FKNLRVC DCH + K +S+IT+   +VR
Sbjct: 611 KEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVR 670

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D+ RFH F+DG CSCGDYW
Sbjct: 671 DAVRFHSFEDGCCSCGDYW 689



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 255/473 (53%), Gaps = 12/473 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  L+ SG    + +S  L++ Y    +   +   FD +  RNV +W++++S +V  G
Sbjct: 27  QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
            L  ++  F +     G+ P+ +TF   LKAC     L  G +IH   LK+GFE  V V 
Sbjct: 87  DLKGSLSLFSEMG-RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVG 145

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ MY + G  N A K+F  +  R   SWNAMI+G+  +G   +ALD    M+   + 
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205

Query: 242 MDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLE--FNLFVSNNLINMYAKFGMMRH 297
             P   T+ S+L  C+ +  I +G  IH ++V+ G     +  ++ +L+++Y K G +  
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A + FDQ+ E+ ++SW+S+I  Y Q  + + A G F  +Q+   Q D   L S+  + A 
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
               R  + +    ++    +E  ++ N+VVDMY K G+++ A   F  + +KDVISW  
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK- 476
           +ITGY ++GL  +++ +F  M   N I P++  Y+++L A SH G +++G ++ +++++ 
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHN-IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHG 528
           + +   V    C+VD+ G+ GR+ +A  L   +P   +V  W  ++S   +HG
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 207/409 (50%), Gaps = 11/409 (2%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + SIL VC R      G  +H Y++K G   NL  SN LI+MY K      A +VFD M 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ER+VVSW+++++ +  + D   +   F+ M + GI P+  T  +       LN       
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HGF ++ G+ M  V +GN++VDMY+K G IN A  VF  +  + +ISWN +I G+   G
Sbjct: 129 IHGFCLKIGFEMM-VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187

Query: 427 LASEAIEVFQMMEECN-EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-C-FDV 483
             S+A++ F MM+E N +  P++ T  S+L A S  G +  G +IH  ++++   C    
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            +   LVD+Y KCG +  A   F Q+   + + W+++I  +   G+  +A+  F+++ + 
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHM-MQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             + D     S++   +   L+ +G++   + ++   G++  +     +VD++ + G + 
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVD 365

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
            A      M ++ D   W  ++     HG   LG  +    +E+   N+
Sbjct: 366 EAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNI 410



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 196/426 (46%), Gaps = 12/426 (2%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F    ++C  L+ +++   +H   +  G    V     LV+ Y+  G ++ +   F 
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRN---L 159
            I  R++ +WN+MI+ +V  G  S+A+D F      +   RPD +T   +LKAC +   +
Sbjct: 167 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226

Query: 160 VDGKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             GK+IH  +++ GF       +  SL+ +Y + G    ARK FD +  +   SW+++I 
Sbjct: 227 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY Q G  VEA+ +   ++     +D   ++SI+ V A    +  G  +    VK     
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
              V N++++MY K G++  A + F +M  +DV+SW  +I  Y +      +   F  M 
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           +  I+PD +  +++ S  +     +    +   ++        V     VVD+  + G +
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466

Query: 398 NSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             A  + + +P+K +V  W TL++    +G      EV +++   +  NP    YV +  
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP--ANYVMMSN 524

Query: 457 AYSHVG 462
            Y   G
Sbjct: 525 LYGQAG 530


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/678 (37%), Positives = 390/678 (57%), Gaps = 8/678 (1%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +  +L  CR L + +K+H  +     + + F+   L+  Y + G  + A+  F  + + +
Sbjct: 38  YASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHN 97

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           + SWN +++ Y Q+G+   A  +   M  +GV  + +T+++ L  C  + N+  G  ++ 
Sbjct: 98  AHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNE 157

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            I    LE +  V ++LI MY +   +  A R FD+  E+DVV W ++I+AY  +     
Sbjct: 158 LIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSR 217

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A      M   GI+  L T VSL    A   D RN  + H      G      ++   +V
Sbjct: 218 ALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLV 277

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           ++Y K G ++ A  V + +PV+  +SW  +I  YAQNG A+EAI +FQ M+      P+ 
Sbjct: 278 NLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMD-LEGAEPSD 336

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVDMYGKCGRIDDAMSLF 506
            T +S++ + + +G L  G +IHAR I++   F   + +   ++ MYGKCG ++ A  +F
Sbjct: 337 ITLISVVDSCAVLGTLSLGKRIHAR-IRSSPSFSQSLMLLNAVITMYGKCGNLELAREVF 395

Query: 507 YQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQML-DEGVRPDHITFVSLLTACSHSG 563
             VP    S V W A+I  +  +G G++A+  F++ML D G  P+ +TF+S+L ACSH G
Sbjct: 396 ECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLG 455

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI-QNMPVRPDASIWGA 622
            + +   +F  M  +FG+ P   HY C+VDL GRAG LG A   + ++     D   W A
Sbjct: 456 QLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIA 515

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
            L AC+++G++E    A+ R+ E++ ENV   VL+SN+YA  G+   V  +R+  +  G+
Sbjct: 516 FLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGV 575

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK  G S IE+NN+V  F   + +HP+  +IY EL  L  ++K  GYVPD   VL+DV+E
Sbjct: 576 KKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDE 635

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
           ++K  +L  HSERLA+A GIIS+PP + +++ KNLRVC DCH  TKFISQI  R+IIVRD
Sbjct: 636 EKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRD 695

Query: 803 SNRFHHFKDGICSCGDYW 820
           ++RFHHFKDG+CSCGDYW
Sbjct: 696 TSRFHHFKDGVCSCGDYW 713



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 9/284 (3%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           + L+  Y    ++  +   FD    ++V  W +MIS Y    R S A++   +  L  G+
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDL-EGI 230

Query: 143 RPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW-DVFVAASLLHMYCRFGLANVAR 198
           +    T+  +L AC + +D   G   H     +G +     VA +L+++Y + G  + AR
Sbjct: 231 KLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDAR 290

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++ D MPVR S SW AMI+ Y Q+GNA EA+++   M LEG     IT+ S++  CA   
Sbjct: 291 RVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLG 350

Query: 259 NILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNS 315
            +  G  IH  I        +L + N +I MY K G +  A  VF+   +  R VV+W +
Sbjct: 351 TLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTA 410

Query: 316 IIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQL 358
           +I AY Q+     A   F  M    G +P+ +T +S+    + L
Sbjct: 411 MIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHL 454



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 18/261 (6%)

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           TV + T LVN Y   G +  +R   D +  R   +W +MI+ Y + G  +EA++ F    
Sbjct: 270 TVVAGT-LVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMD 328

Query: 138 LTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGL 193
           L  G  P   T   V+ +C     L  GK+IH  +     F   + +  +++ MY + G 
Sbjct: 329 L-EGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGN 387

Query: 194 ANVARKLFDDMPVRDSG--SWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASI 250
             +AR++F+ +P+R     +W AMI  Y Q+G   EA+++  EM ++ G   + +T  S+
Sbjct: 388 LELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSV 447

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKFGMMRHALRVF--DQ 304
           L  C+    +        +    G +F +  + +    L+++  + G +  A ++    +
Sbjct: 448 LCACSHLGQLEQAW---EHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHK 504

Query: 305 MMERDVVSWNSIIAAYEQSND 325
             E DVV W + ++A + + D
Sbjct: 505 DFEADVVCWIAFLSACQMNGD 525



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 44  ESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKI-KTVFSSTKLVNFYANLGDLSFSR 99
           E  +I    +  SC  L  +   KR+HA +  S    +++     ++  Y   G+L  +R
Sbjct: 333 EPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAR 392

Query: 100 HTFDHISYR--NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
             F+ +  R  +V TW +MI  Y + G   EA++ F +  +  G  P+  TF  VL AC 
Sbjct: 393 EVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACS 452

Query: 158 NL 159
           +L
Sbjct: 453 HL 454


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/699 (35%), Positives = 383/699 (54%), Gaps = 66/699 (9%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           M+ + G    AR +F +MP RD+ SW  M+ G  ++G   EA+  L +M  +G +    T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK--------------- 291
           + ++L  CA +     G  +H ++VK GL   + V+N+++NMY K               
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 292 ----------------FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
                            G M  A  +F+ M +R +VSWN++IA Y Q+     A   F+ 
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 336 M-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF----------------- 377
           M  ++ + PD  T+ S+ S  A L + R  + VH +I+R                     
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 378 ------------ME---DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
                       ME   +VI   A+++ Y K+G + SA  +F  +  +DV++W  +I GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            QNG   EAI++F+ M  C    PN  T  ++L   + +  L  G +IH R I++ L   
Sbjct: 301 EQNGRNDEAIDLFRSMITCGP-EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
             V+  ++ MY + G    A  +F QV  R  ++ W ++I     HGQG++A+  F +ML
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             GV PD IT+V +L+ACSH+G V+EG+RY+  ++ E  I P + HY CMVDL  RAG  
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A  FI+ MPV PDA  WG+LL ACR+H N EL  +A+++L  +D  N G Y  ++N+Y
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           +  G+W     +    +++ ++K  G+S   + +K+ +F   +  HP+ + +Y     + 
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 599

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
            ++K  G+VPD   VL DV+++ KE +L+ HSE+LAIAFG+IS+P K+ +++ KNLRVC 
Sbjct: 600 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH   K IS++T+REIIVRD+ RFHHF+DG+CSC DYW
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 198/437 (45%), Gaps = 48/437 (10%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +++V S   +V+   +LG +  +   F+ +  R++ +WN+MI+ Y + G  ++A+  F +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
               S + PD +T   VL AC NL +   GK++H  +L+    ++  V  +L+  Y + G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 193 LANVARKLFDD---------------------------------MPVRDSGSWNAMISGY 219
               AR++ D                                  M  RD  +W AMI GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q+G   EA+D+   M   G   +  T+A++L VCA    +  G  IH   ++  LE + 
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            VSN +I MYA+ G    A R+FDQ+  R + ++W S+I A  Q      A G F  M +
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           AG++PD +T V + S  +        +  +  I        ++     +VD+ A+ G+ +
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480

Query: 399 SACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVS 453
            A      +PV+ D I+W +L++    +    LA  A E          I+P N G Y +
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL------SIDPNNSGAYSA 534

Query: 454 ILPAYSHVGALRQGIKI 470
           I   YS  G      +I
Sbjct: 535 IANVYSACGRWSDAARI 551



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN-VYTWNSMIS 118
           L + K++H   + S   ++   S  ++  YA  G   ++R  FD + +R    TW SMI 
Sbjct: 341 LDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 400

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL---KL 172
              + G+  EAV  F +  L +G+ PD  T+  VL AC +   + +GK+ +  +    ++
Sbjct: 401 ALAQHGQGEEAVGLFEEM-LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQI 459

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDI 231
             E   +  A ++ +  R GL + A++    MPV  D+ +W +++S  C+     E  ++
Sbjct: 460 APEMSHY--ACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSA-CRVHKNAELAEL 516

Query: 232 LDEMRLEGVSMDP------ITVASILPVCAR 256
             E  L   S+DP        +A++   C R
Sbjct: 517 AAEKLL---SIDPNNSGAYSAIANVYSACGR 544


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/587 (40%), Positives = 363/587 (61%), Gaps = 7/587 (1%)

Query: 237 LEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           LEG  + +D     ++L  C     +  G ++H ++++     +L ++N L+NMYAK G 
Sbjct: 42  LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A +VFD+M ERD V+W ++I+ Y Q + P  A   F  M + G  P+  TL S+   
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A          +HGF ++ G F  +V +G+A++D+Y + G+++ A  VF+ L  ++ +S
Sbjct: 162 AAAERRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 220

Query: 415 WNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           WN LI G+A+     +A+E+FQ M+ E     P+  +Y S+  A S  G L QG  +HA 
Sbjct: 221 WNALIAGHARRCGTEKALELFQGMLREG--FRPSHFSYASLFGACSSTGFLEQGKWVHAY 278

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           +IK+      F    L+DMY K G I DA  +F ++ +   V WN++++ +  HG G++A
Sbjct: 279 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEA 338

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           + +F +M   G+RP+ I+F+S+LTACSHSGL+ EG  Y+ +M+++ GI     HY  +VD
Sbjct: 339 VCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVD 397

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L GRAG L  A  FI+ MP+ P A+IW ALL ACR+H N ELGA A++ +FE+D ++ G 
Sbjct: 398 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 457

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           +V++ NIYA+ G+W     VR   ++ G+KK P  S +E+ N + +F   +  HP+ E+I
Sbjct: 458 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 517

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
             +   + AK+K LGYVPD S V+  V++ E+E  L  HSE++A+AF ++++PP S I I
Sbjct: 518 ARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHI 577

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KN+RVCGDCH+  K  S+   REIIVRD+NRFHHFKDG CSC DYW
Sbjct: 578 KKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 238/493 (48%), Gaps = 52/493 (10%)

Query: 15  KLLPLLQAHRPLFSAAA--------NSLQISPDCLENESREID---FDDLFQSCTK---L 60
           +LL  L+  R L S  A         SL+   + LE     +D   ++ L + CT    L
Sbjct: 8   RLLSQLKLSRRLHSLPAPLSEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLL 67

Query: 61  HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
              + +H  L+ S     +  +  L+N YA  G L  +R  FD +  R+  TW ++IS Y
Sbjct: 68  TQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGY 127

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWD 177
            +  R  +A+  F Q  L  G  P+ +T   V+KA    R    G ++H   +K GF+ +
Sbjct: 128 SQHDRPFDALVLFNQM-LRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 186

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
           V V ++LL +Y R+GL + A+ +FD +  R+  SWNA+I+G+ +     +AL++   M  
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLR 246

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
           EG      + AS+   C+ +  +  G  +H Y++K G +   F  N L++MYAK G +  
Sbjct: 247 EGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 306

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A ++FD++ +RDVVSWNS++ AY Q      A  +F  M++ GI+P+ ++ +S+ +  + 
Sbjct: 307 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACS- 365

Query: 358 LNDCRNSRSVHGFIMRRGW-----FMEDVIIGNA-----VVDMYAKLGIINSACAVFEGL 407
                     H  ++  GW       +D I+  A     +VD+  + G +N A    E +
Sbjct: 366 ----------HSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEM 415

Query: 408 PVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQ-GTYVSILPAYSHV 461
           P++   + W  L+     +    L + A E VF       E++P+  G +V +   Y+  
Sbjct: 416 PIEPTAAIWKALLNACRMHKNTELGAYAAEHVF-------ELDPDDPGPHVILYNIYASG 468

Query: 462 GALRQGIKIHARV 474
           G      ++  ++
Sbjct: 469 GRWNDAARVRKKM 481


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/682 (35%), Positives = 397/682 (58%), Gaps = 6/682 (0%)

Query: 50  FDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++CT L    H    H  ++V G     + +T L+NFY+  G    +R  FD + 
Sbjct: 51  FPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMD 110

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RNV  W +MI  Y R G    A    Y      G++P   T   +L     LV  + +H
Sbjct: 111 DRNVVPWTTMIGCYTRAGEHDVAFS-MYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLH 169

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V++ GF  DV +A S+L++YC+ G    A+ LF+ M  RD  SWN+++SGY Q GN  
Sbjct: 170 ACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIR 229

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           E L +L  M+ +G+  D  T  S++   A    +  G ++H +I++ GLE +  +  +LI
Sbjct: 230 EVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLI 289

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY K G +  A R+F+ MM +DV+SW ++I+   Q++    A   F  M ++ + P   
Sbjct: 290 GMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTA 349

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+ +  A+L       SVHG+I+R+   + D+   N++V MYAK G +  +C+VF+ 
Sbjct: 350 TIASVLAACAELGSFPLGTSVHGYILRQRIKL-DIPSQNSLVTMYAKCGHLEQSCSVFDR 408

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  +D++SWN +++G+AQNG   +A+ +F  M +  +  P+  T VS+L A + +GAL Q
Sbjct: 409 MSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALHQ 467

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  IH  V K+CL   + + T LVDMY KCG +  A   F ++P+   V W++II+ +G 
Sbjct: 468 GKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGS 527

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG+G+ AL  +   L  G++P+H+ ++S+L+ACSH+GLV +G  +FH M ++FGI+P L+
Sbjct: 528 HGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLE 587

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           H  C+VDL  RAG +  A++F + M  +P   + G LL ACR  GN+ELG + +  +  +
Sbjct: 588 HRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVIL 647

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
              N G YV +++ YA++ +W+GV EV +  +   LKK PGWS IE++  +  F+T + +
Sbjct: 648 KPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSS 707

Query: 707 HPKYEKIYDELRNLTAKMKSLG 728
           HP++E+I   L+ L ++M+ +G
Sbjct: 708 HPQFEEIMLVLKILGSEMRKVG 729



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 179/584 (30%), Positives = 298/584 (51%), Gaps = 27/584 (4%)

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCS 168
           ++N++I+     G   + +   Y   L++   PD +TFP ++KAC +L     G   H  
Sbjct: 15  SYNAIINRLSTAGAFCDVL-LTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQR 73

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           V+  G+  D ++A SL++ Y +FG    ARK+FD M  R+   W  MI  Y ++G    A
Sbjct: 74  VIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL-------IHLYIVKHGLEFNLFV 281
             + + MR +G+    +T+            +LSG+L       +H  ++++G   ++ +
Sbjct: 134 FSMYNIMRRQGIQPSSVTML----------GLLSGVLELVHLQCLHACVIQYGFGSDVAL 183

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           +N+++N+Y K G +  A  +F+ M  RDV+SWNS+++ Y Q  +          M+  GI
Sbjct: 184 ANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD  T  SL S  A  +     + VHG I+R G   +D  I  +++ MY K G +NSA 
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG-LEQDSHIETSLIGMYLKCGNVNSAF 302

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +FEG+  KDVISW  +I+G  QN  A  A+ VF+ M + + + P+  T  S+L A + +
Sbjct: 303 RIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAEL 361

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G+   G  +H  +++  +  D+     LV MY KCG ++ + S+F ++ R   V WNAI+
Sbjct: 362 GSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIV 421

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S H  +G   KAL  F +M     RPD IT VSLL AC+  G + +G ++ H    +  +
Sbjct: 422 SGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCL 480

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG-AVAS 640
            P +     +VD++ + G LG A      MP + D   W +++     HG  E    + S
Sbjct: 481 GPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSHGKGETALRMYS 539

Query: 641 DRLFE-VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           D L   +   +V Y  ++S    N    +G+    S+ +D G++
Sbjct: 540 DFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIE 583


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/529 (43%), Positives = 354/529 (66%), Gaps = 9/529 (1%)

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM---QQAGIQPDLLTLVSLTSI 354
           A R FD++ + + V   ++ + Y ++N    +   F  M     A +  +   LV+ ++ 
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA- 61

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI--INSACAVFEGLPVKDV 412
            A++ D   + S+H  I + G F  +  + N ++D YAK G   +  A  VF+ +  +DV
Sbjct: 62  SARVPDRGVTASLHALIAKIG-FERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDV 119

Query: 413 ISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +SWN++I  YAQNG+++EAI ++ +M+     I  N     ++L A +H GA++ G  IH
Sbjct: 120 VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIH 179

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            +V++  L  +V+V T +VDMY KCGR++ A   F ++   + + W+A+I+ +G+HG+G 
Sbjct: 180 NQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQ 239

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL  F +M   G+RP++ITF+S+L ACSH+GL+ EG+ +++ M++EFGI+  ++HYGCM
Sbjct: 240 EALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCM 299

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GRAG L  A++ I+ M V+PDA+IWGALL ACRIH N+EL  ++  RLFE+D+ N 
Sbjct: 300 VDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNS 359

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           GYYVL+SNIYA  G W+ V+ +R L + R ++K PG+SS E+  K+ +FY G+++HP++ 
Sbjct: 360 GYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHI 419

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +IY  L  L  +M+  GYVP+   VL D++E+EKE  L  HSE+LA+AF +++S P+S I
Sbjct: 420 EIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVI 479

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I KNLRVC DCH   KFI++ITEREII+RD  RFHHFKDG+CSC DYW
Sbjct: 480 HIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 186/376 (49%), Gaps = 16/376 (4%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKAC 156
           +R  FD I   N     +M S YVR   +  +++ F     + S    D         A 
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDSGS 211
             + D      +H  + K+GFE +  V  ++L  Y + G  +  VARK+FD M  RD  S
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVS 121

Query: 212 WNAMISGYCQSGNAVEALDILDEMR--LEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
           WN+MI+ Y Q+G + EA+ +  +M     G+  + + ++++L  CA +  I +G  IH  
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           +V+ GLE N++V  ++++MY+K G +  A R F ++ E++++SW+++I  Y        A
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              FT M+++G++P+ +T +S+ +  +        R  +  + +       V     +VD
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVD 301

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP- 446
           +  + G ++ A ++ + + VK D   W  L++    +    + +E+ +M ++   E++  
Sbjct: 302 LLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH----KNVELAEMSVKRLFELDAS 357

Query: 447 NQGTYVSILPAYSHVG 462
           N G YV +   Y+  G
Sbjct: 358 NSGYYVLLSNIYAEAG 373



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 7/169 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  +V  G  + V+  T +V+ Y+  G +  +   F  I  +N+ +W++MI+ Y   
Sbjct: 176 KHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 235

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK--LGFEWDVF 179
           GR  EA++ F +    SGLRP++ TF  VL AC +  L+D  +   + +K   G E  V 
Sbjct: 236 GRGQEALEIFTEMK-RSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVE 294

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVE 227
               ++ +  R G  + A  L  +M V+ D+  W A++S  C+    VE
Sbjct: 295 HYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA-CRIHKNVE 342


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/589 (39%), Positives = 361/589 (61%), Gaps = 11/589 (1%)

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           E++ +G +M       +L  C     +  G  +H +++K      +++S  LI +Y K  
Sbjct: 7   EIKFDGYNM-------LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCE 59

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  A  VFD+M ER+VVSW ++I+ Y Q      A   F  M ++  +P+  T  ++ S
Sbjct: 60  CLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
                +     R +H  I +R  +   + +G++++DMYAK G I+ A  VFE LP +DV+
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRN-YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVV 178

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           S   +I+GYAQ GL  EA+E+F  ++    ++ N  TY S+L A S + AL  G ++H+ 
Sbjct: 179 SCTAIISGYAQLGLDEEALELFCRLQR-EGMSSNYVTYASLLTALSGLAALDHGKQVHSH 237

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           V++  L F V +   L+DMY KCG ++ A  +F  +P  + + WNA++  +  HG+G + 
Sbjct: 238 VLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEV 297

Query: 534 LNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYF-HMMQEEFGIKPHLKHYGCM 591
           +  F+ M +E  V+PD +TF+++L+ CSH GL  +G   F  MM     I+  ++HYGC+
Sbjct: 298 VKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCV 357

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           +DL GRAG +  A   I+ MP  P A+IWG+LLGACR+H N  +G     RL E++ EN 
Sbjct: 358 IDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENA 417

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G YV++SN+YA+ G+WE V  VR L  ++ + K PG S IE++  +  FY  +R+HP+ E
Sbjct: 418 GNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRRE 477

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +++ ++R L  K K  GYVPD+S VL DV+E++KE IL  HSE+LA+AFG+IS+    P+
Sbjct: 478 EVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPL 537

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ KNLR+C DCHN+ KF+S++  R++ +RD NRFHH   GICSCGDYW
Sbjct: 538 RVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 214/393 (54%), Gaps = 7/393 (1%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G    F  +  +L  C   R + +G+++H  ++K  +   V+++  L+ +Y +      A
Sbjct: 5   GPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCA 64

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R +FD+M  R+  SW AMISGY Q G A EAL +  +M       +  T A++L  C   
Sbjct: 65  RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
                G  IH +I K   E ++FV ++L++MYAK G +  A  VF+ + ERDVVS  +II
Sbjct: 125 SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           + Y Q      A   F  +Q+ G+  + +T  SL + ++ L    + + VH  ++R    
Sbjct: 185 SGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELP 244

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
              V++ N+++DMY+K G +N A  +F  +PV+ VISWN ++ GY+++G   E +++F++
Sbjct: 245 FY-VVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKL 303

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGK 495
           M E N++ P+  T++++L   SH G   +G+++   ++      +  +    C++D+ G+
Sbjct: 304 MREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGR 363

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            GR+++A  L  ++P   ++  W +++    +H
Sbjct: 364 AGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 203/396 (51%), Gaps = 35/396 (8%)

Query: 47  EIDFDD---LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           EI FD    L   C     V+   R+HA ++ +  +  V+ ST+L+  Y     L  +RH
Sbjct: 7   EIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARH 66

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD +  RNV +W +MIS Y + G  SEA+  F Q  L S   P+ +TF  VL +C    
Sbjct: 67  VFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQM-LRSDTEPNEFTFATVLSSCTGFS 125

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G++IH  + K  +E  +FV +SLL MY + G  + AR +F+ +P RD  S  A+IS
Sbjct: 126 GFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIIS 185

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY Q G   EAL++   ++ EG+S + +T AS+L   +    +  G  +H ++++  L F
Sbjct: 186 GYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPF 245

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            + + N+LI+MY+K G + +A ++F+ M  R V+SWN+++  Y +    I     F  M+
Sbjct: 246 YVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMR 305

Query: 338 QAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA---------- 386
           +   ++PD +T +++      L+ C      HG +  +G  M D ++             
Sbjct: 306 EENKVKPDSVTFLAV------LSGCS-----HGGLEDKGLEMFDEMMNGGDEIEAGIEHY 354

Query: 387 --VVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
             V+D+  + G +  A  + + +P +   + W +L+
Sbjct: 355 GCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLL 390


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/701 (36%), Positives = 398/701 (56%), Gaps = 23/701 (3%)

Query: 138 LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           LT G       + P+L  C    +L   + +H  + K G   D+FVA SL++ Y R   A
Sbjct: 70  LTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAA 129

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR+LFD MP R+  +W A+++GY  +      L++  EM   G      T+ + L  C
Sbjct: 130 RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 189

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
             S ++  G  +H Y +K+G E    + N+L ++YAK G +  ALR F ++ E++V++W 
Sbjct: 190 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 249

Query: 315 SIIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           ++I+A  +  + +      F  M   G+ P+  TL S+ S+     D    + V  F  +
Sbjct: 250 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 309

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ--------- 424
            G    ++ + N+ + +Y + G  + A  +FE +    +I+WN +I+GYAQ         
Sbjct: 310 IGC-ETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 425 --NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
                  +A+ +F+ ++  + + P+  T+ SIL   S + AL QG +IHA+ IK+    D
Sbjct: 369 QARSRGFQALTIFRDLKR-SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V V + LV+MY KCG I DA   F ++P  + V W ++IS +  HGQ  +A+  F +M  
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 487

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            GVRP+ ITFVSLL+ACS++GLV E + YF MM++E+ I+P + HYGCM+D+F R G + 
Sbjct: 488 AGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE 547

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A +FI+     P+ +IW +L+  CR HGNMEL   A+D+L E+  + +  Y+L+ N+Y 
Sbjct: 548 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYI 607

Query: 663 NVGKWEGVDEVRSLAR--DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           +  +W+ V  VR L +  D G+ +   W  I + +KV  F   +RTHP+  ++Y  L NL
Sbjct: 608 STERWQDVARVRKLMKQEDVGILRDRSW--ITIKDKVYFFRANDRTHPQATELYQLLENL 665

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHI--LTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
             K K++GY P ++  L D E+DEK     L  HSERLA+A G++ +PP + +++ KN+ 
Sbjct: 666 LEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNIT 725

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           +C DCH+  K  S +  REIIVRDS R H FKDG CSCGD+
Sbjct: 726 MCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 276/545 (50%), Gaps = 32/545 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   + +H  +  +G    +F +T LVN Y        +R  FD +  RNV TW ++++ 
Sbjct: 94  LGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTG 153

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y    + +  ++ F +  L  G  P  YT    L AC    D   GK++H   +K G E 
Sbjct: 154 YTLNSQPALGLEVFVEM-LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 212

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEM 235
              +  SL  +Y + G  + A + F  +P ++  +W  MIS   +    VE  + +  +M
Sbjct: 213 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDM 272

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            ++GV  +  T+ S++ +C    ++  G  +  +  K G E NL V N+ + +Y + G  
Sbjct: 273 LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGET 332

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQ----SNDPITA--HGF-----FTTMQQAGIQPD 344
             A+R+F+QM +  +++WN++I+ Y Q    + D + A   GF     F  ++++ ++PD
Sbjct: 333 DEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPD 392

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T  S+ S+ + +        +H   ++ G F+ DV++ +A+V+MY K G I  A   F
Sbjct: 393 LFTFSSILSVCSAMMALEQGEQIHAQTIKSG-FLSDVVVNSALVNMYNKCGCIQDANKAF 451

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P +  ++W ++I+GY+Q+G   EAI++F+ M     + PN+ T+VS+L A S+ G +
Sbjct: 452 LEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG-VRPNEITFVSLLSACSYAGLV 510

Query: 465 RQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP----WN 518
            +  + +  ++K   C +  V    C++DM+ + GR++DA S    + R+   P    W+
Sbjct: 511 EEA-EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF---IKRTGFEPNEAIWS 566

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMM-Q 576
           ++++    HG  + A     ++L+  ++P  I T++ LL     +    +  R   +M Q
Sbjct: 567 SLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILLLNMYISTERWQDVARVRKLMKQ 624

Query: 577 EEFGI 581
           E+ GI
Sbjct: 625 EDVGI 629



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 205/429 (47%), Gaps = 24/429 (5%)

Query: 223 GNAVEA----LDILDEMRL--EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           G  +EA    LD+ + M +  EG ++       +L  C  + ++ +   +H ++ K G  
Sbjct: 51  GGGMEAPLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGAS 110

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++FV+ +L+N Y +    R A R+FD M ER+VV+W +++  Y  ++ P      F  M
Sbjct: 111 ADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM 170

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLG 395
            + G  P   TL +  +      D    + VHG+ ++ G   E +  +GN++  +YAKLG
Sbjct: 171 LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYG--AESITSMGNSLCSLYAKLG 228

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASE-AIEVFQMMEECNEINPNQGTYVSI 454
            ++SA   F  +P K+VI+W T+I+  A++    E  + +F  M   + + PN+ T  S+
Sbjct: 229 SLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDM-LMDGVMPNEFTLTSV 287

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           +        L  G ++ A   K     ++ V    + +Y + G  D+AM LF Q+  +S 
Sbjct: 288 MSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASI 347

Query: 515 VPWNAIISCHG-----------IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           + WNA+IS +               +G +AL  FR +    ++PD  TF S+L+ CS   
Sbjct: 348 ITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMM 407

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            + +G++  H    + G    +     +V+++ + G +  A+     MP R   + W ++
Sbjct: 408 ALEQGEQ-IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT-WTSM 465

Query: 624 LGACRIHGN 632
           +     HG 
Sbjct: 466 ISGYSQHGQ 474



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   C+    L   +++HA  + SG +  V  ++ LVN Y   G +  +   F  + 
Sbjct: 396 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKK 164
            R   TW SMIS Y + G+  EA+  F +  L +G+RP+  TF  +L AC    LV+  +
Sbjct: 456 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL-AGVRPNEITFVSLLSACSYAGLVEEAE 514

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFG-----LANVARKLFDDMPVRDSGSWNAMIS 217
            +  ++K  +  +  V     ++ M+ R G      + + R  F+     +   W+++++
Sbjct: 515 HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP----NEAIWSSLVA 570

Query: 218 GYCQSGN---AVEALDILDEMRLEGV 240
           G    GN   A  A D L E++ +G+
Sbjct: 571 GCRSHGNMELAFYAADKLLELKPKGI 596


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/661 (38%), Positives = 382/661 (57%), Gaps = 45/661 (6%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN---VARKLFDDMPVRDSGSWNAMISGYC 220
           +IH  ++K   + + FV A LL        AN    AR +FD++P  D+  WN MI  Y 
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80

Query: 221 QSGNAVEALDILDEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            S N  E++ +  +MR  E + +D  +++ ++  C R  +  +G  +H  ++K GL  +L
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           FV   LI MYAKFG +  A  + D+M   D+V +N ++A Y +  +   AH  F  M + 
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE- 199

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
                                                   D++  N ++  +A LG + +
Sbjct: 200 ---------------------------------------RDLVSWNTMIHGHASLGDVGT 220

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  +F+    +D+ISW+++I  YA+   ++EA+ +F  M+  N + P++ T VS+L A  
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLAN-VLPDKVTMVSVLSACG 279

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            VGAL  G  IH  + +N +  D+ + T LVDMY KCG ID+++ +F  +       W+A
Sbjct: 280 DVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSA 339

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I     HG G+ AL+ F +M+ E ++P+ +TF+ +L+ACSH GLV EG  YF  M + +
Sbjct: 340 MIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVY 399

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            + P ++HYGC+VD+ GRAG L  A   I++MP  PDA +W ALLGACRI+ N+E+   A
Sbjct: 400 DVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEA 459

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           +  L E++    G YVL+SNIY+   +W+ V  VR + ++  ++K PG SSIEV+N V  
Sbjct: 460 TVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHE 519

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+++HP+ +KI   L  +TA++K+ GY P  + VLQD +E EKE+ L  HSE+LAIA
Sbjct: 520 FVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIA 579

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++S+ P S I+I KNLRVC DCH   K IS+  +R IIVRD NRFHHF +G CSC DY
Sbjct: 580 FGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDY 639

Query: 820 W 820
           W
Sbjct: 640 W 640



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 216/498 (43%), Gaps = 80/498 (16%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFY---ANLGDLSFSRHTFDHISYRN 109
           L Q+ TKL+ + ++HAL++ +      F   KL+      ++  DL ++R  FD I   +
Sbjct: 9   LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPD 68

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
            + WN+MI  Y+      E++  F+Q      +  D Y+   V++AC  L D   G+K+H
Sbjct: 69  TFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLH 128

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARK--------------------------- 199
             VLK+G   D+FV  +L+ MY +FG   +AR                            
Sbjct: 129 TQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEIN 188

Query: 200 ----LFDDMPVRDSGSWNAMISG-------------------------------YCQSGN 224
               LFD MP RD  SWN MI G                               Y ++  
Sbjct: 189 LAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQ 248

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           + EAL +  EM+L  V  D +T+ S+L  C     +  G +IH  I ++ +E +L +  +
Sbjct: 249 SNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTS 308

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L++MYAK G + ++LRVF+ M  RDV +W+++I           A   F+ M    I+P+
Sbjct: 309 LVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPN 368

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T + + S  + +       +    + +       +     VVD+  + G +  A  + 
Sbjct: 369 DVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELI 428

Query: 405 EGLP-VKDVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPN-QGTYVSILPAYS 459
           + +P   D I W  L+     Y    +A EA     ++    E+ P+  G YV +   YS
Sbjct: 429 KSMPFAPDAIVWRALLGACRIYKNVEIAEEA--TVNLL----ELEPHVDGNYVLLSNIYS 482

Query: 460 HVGALRQGIKIHARVIKN 477
                 + + +  R++KN
Sbjct: 483 QAKEWDKVVNVR-RMMKN 499



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 6/198 (3%)

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD---AMSLFYQVP 510
           ++    +   L Q I+IHA +IK  L  + FV   L+     C   +D   A S+F ++P
Sbjct: 6   VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSGLVSEGQ 569
              +  WN +I  +       ++++ F QM  +   P D  +   ++ AC        GQ
Sbjct: 66  SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
           +  H    + G+   L     +++++ + G + +A N +  M   PD   +  LL     
Sbjct: 126 K-LHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEM-AHPDLVPYNVLLAEYVR 183

Query: 630 HGNMELGAVASDRLFEVD 647
            G + L     DR+ E D
Sbjct: 184 VGEINLAHDLFDRMPERD 201


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/697 (38%), Positives = 404/697 (57%), Gaps = 17/697 (2%)

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF--EWDVFVAASLLHMYCRFGL 193
           FTL S LR   +  P    A R    G++ H   LK G       F   +LL MY R GL
Sbjct: 11  FTLVSVLRAVSH-LPAAAAAVRL---GREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 66

Query: 194 ANVARKLFDD-MPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
              A++LF    P R D  +WN M+S   QSG   EA+  L +M   GV  D +T AS L
Sbjct: 67  VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 126

Query: 252 PVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--R 308
           P C+R + +  G  +H Y++K   L  N FV++ L++MYA    +  A +VFD + +  +
Sbjct: 127 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 186

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
            +  WN++I  Y Q+     A   F  M+ +AG  P   T+ S+    A+        +V
Sbjct: 187 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 246

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HG++++RG    +  + NA++DMYA+LG  + A  +F  + + DV+SWNTLITG    G 
Sbjct: 247 HGYVVKRG-MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGH 305

Query: 428 ASEAIEVFQMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
            ++A ++ + M++  E  + PN  T +++LP  + + A  +G +IH   +++ L  DV V
Sbjct: 306 VADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAV 365

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG- 544
            + LVDMY KCG +  + ++F ++PR +++ WN +I  +G+HG G +A   F +M   G 
Sbjct: 366 GSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGE 425

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
            RP+ +TF++ L ACSHSG+V  G + FH M+ + G++P      C+VD+ GRAG L  A
Sbjct: 426 ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 485

Query: 605 HNFIQNMPV-RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           +  + +M       S W  +LGACR+H N+ LG +A +RL E++ E   +YVL+ NIY+ 
Sbjct: 486 YAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSA 545

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
            G+W    EVRS  R RG+ K PG S IEV+  +  F  G   HP  E+++  +  L  +
Sbjct: 546 AGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGE 605

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           M + GY PD S VL D+++ +K  +L  HSE+LAIAFG++ + P + I++ KNLRVC DC
Sbjct: 606 MVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDC 665

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H   KF+S++  REI++RD  RFHHF++G CSCGDYW
Sbjct: 666 HEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 159/441 (36%), Positives = 239/441 (54%), Gaps = 19/441 (4%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHIS--YRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           F+   L++ YA LG ++ ++  F   +    +V TWN+M+SV V+ G   EAV   Y   
Sbjct: 52  FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDM- 110

Query: 138 LTSGLRPDFYTFPPVLKACR--NLVD-GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGL 193
           +  G+RPD  TF   L AC    L+D G+++H  V+K      + FVA++L+ MY     
Sbjct: 111 VALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQ 170

Query: 194 ANVARKLFDDMPVRDSGS----WNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVA 248
              AR++FD +P  DSG     WNAMI GY Q+G   EAL +   M  E G      T+A
Sbjct: 171 VGKARQVFDMVP--DSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMA 228

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S+LP CARS+       +H Y+VK G+  N FV N L++MYA+ G    A R+F  +   
Sbjct: 229 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 288

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQ---AGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           DVVSWN++I           A      MQQ    G+ P+ +TL++L    A L      +
Sbjct: 289 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK 348

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +HG+ +R      DV +G+A+VDMYAK G +  + AVF+ LP ++ I+WN LI  Y  +
Sbjct: 349 EIHGYAVRHA-LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 407

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCLCFDVF 484
           GL  EA  +F  M    E  PN+ T+++ L A SH G + +G+++ HA    + +     
Sbjct: 408 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 467

Query: 485 VATCLVDMYGKCGRIDDAMSL 505
           +  C+VD+ G+ GR+D+A ++
Sbjct: 468 ILACVVDILGRAGRLDEAYAM 488



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V  G     F    L++ YA LG    +R  F  +   +V +WN++I+  V  G 
Sbjct: 246 VHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGH 305

Query: 126 LSEAVDCFYQFTL--TSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
           +++A     +       G+ P+  T   +L  C  L     GK+IH   ++   + DV V
Sbjct: 306 VADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAV 365

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+ MY + G   ++R +FD +P R++ +WN +I  Y   G   EA  + D M   G 
Sbjct: 366 GSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGE 425

Query: 241 SM-DPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +  + +T  + L  C+ S  +  GL L H     HG+E    +   ++++  + G +  A
Sbjct: 426 ARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEA 485

Query: 299 LRVFDQMM--ERDVVSWNSIIAA 319
             +   M   E+ V +W++++ A
Sbjct: 486 YAMVTSMEAGEQQVSAWSTMLGA 508



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 7/164 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H   V       V   + LV+ YA  G L+ SR  FD +  RN  TWN +I  Y   
Sbjct: 348 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 407

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG--KKIHCSVLKLGFEWDVF 179
           G   EA   F + T +   RP+  TF   L AC +  +VD   +  H      G E    
Sbjct: 408 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 467

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDS--GSWNAMISGYCQ 221
           + A ++ +  R G  + A  +   M   +    +W+ M+ G C+
Sbjct: 468 ILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML-GACR 510


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/573 (41%), Positives = 351/573 (61%), Gaps = 3/573 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           AS+L  C  +  +  G  +H  + + G+ +NL ++  L+N Y+    +R+A  +FD++ +
Sbjct: 62  ASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPK 121

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
            ++  WN +I AY  +    TA   +  M + G++PD  TL  +    + L+     R +
Sbjct: 122 GNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVI 181

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H  ++R GW   DV +G A+VDMYAK G +  A  VF+ +  +D + WN+++  YAQNG 
Sbjct: 182 HERVIRSGW-ERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGH 240

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
             E++ +   M     + P + T V+++ + + +  L  G +IH    ++   ++  V T
Sbjct: 241 PDESLSLCCEMA-AKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKT 299

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+DMY KCG +  A  LF ++     V WNAII+ + +HG   +AL+ F +M+ E  +P
Sbjct: 300 ALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QP 358

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           DHITFV  L ACS   L+ EG+  +++M  +  I P ++HY CMVDL G  G L  A++ 
Sbjct: 359 DHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDL 418

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I+ M V PD+ +WGALL +C+ HGN+EL  VA ++L E++ ++ G YV+++N+YA  GKW
Sbjct: 419 IRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKW 478

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           EGV  +R L  D+G+KK    S IEV NKV  F +G+ +HP    IY EL+ L   M+  
Sbjct: 479 EGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREA 538

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GYVPD   V  DVEEDEK  ++ SHSERLAIAFG+IS+ P + + I KNLR+C DCH   
Sbjct: 539 GYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAI 598

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KFIS+ITEREI VRD NR+HHF+ G+CSCGDYW
Sbjct: 599 KFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 238/447 (53%), Gaps = 12/447 (2%)

Query: 145 DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           + Y +  +L++C   + L  GK++H  + +LG  +++ +A  L++ Y        A  LF
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D +P  +   WN +I  Y  +G    A+ +  +M   G+  D  T+  +L  C+    I 
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G +IH  +++ G E ++FV   L++MYAK G +  A  VFD++++RD V WNS++AAY 
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYA 236

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q+  P  +      M   G++P   TLV++ S  A +    + R +HGF  R G+   D 
Sbjct: 237 QNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDK 296

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            +  A++DMYAK G +  AC +FE L  K V+SWN +ITGYA +GLA EA+++F+ M + 
Sbjct: 297 -VKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK- 354

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRID 500
            E  P+  T+V  L A S    L +G  ++  ++++C +   V   TC+VD+ G CG++D
Sbjct: 355 -EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLD 413

Query: 501 DAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTA 558
           +A  L  Q+     S  W A+++    HG  + A     ++++  + PD    +V L   
Sbjct: 414 EAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIE--LEPDDSGNYVILANM 471

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            + SG      R   +M ++ GIK ++
Sbjct: 472 YAQSGKWEGVARLRQLMIDK-GIKKNI 497



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 220/445 (49%), Gaps = 20/445 (4%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L +SC     L   K+LHA L   G    +  +TKLVNFY+    L  + H FD I 
Sbjct: 61  YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP 120

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
             N++ WN +I  Y   G    A+  ++Q  L  GL+PD +T P VLKAC  L    +G+
Sbjct: 121 KGNLFLWNVLIRAYAWNGPHETAISLYHQM-LEYGLKPDNFTLPFVLKACSALSTIGEGR 179

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH  V++ G+E DVFV A+L+ MY + G    AR +FD +  RD+  WN+M++ Y Q+G
Sbjct: 180 VIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNG 239

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  E+L +  EM  +GV     T+ +++   A    +  G  IH +  +HG ++N  V  
Sbjct: 240 HPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKT 299

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G ++ A  +F+++ E+ VVSWN+II  Y      + A   F  M +   QP
Sbjct: 300 ALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QP 358

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T V   +  ++       R+++  ++R       V     +VD+    G ++ A  +
Sbjct: 359 DHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDL 418

Query: 404 FEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHV 461
              + V  D   W  L+     +G   E  EV   +E+  E+ P + G YV +   Y+  
Sbjct: 419 IRQMDVMPDSGVWGALLNSCKTHG-NVELAEV--ALEKLIELEPDDSGNYVILANMYAQS 475

Query: 462 GA------LRQGIKIHARVIKNCLC 480
           G       LRQ + I   + KN  C
Sbjct: 476 GKWEGVARLRQ-LMIDKGIKKNIAC 499



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 94/180 (52%), Gaps = 2/180 (1%)

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N   Y S+L +     AL  G ++HAR+ +  + +++ +AT LV+ Y  C  + +A  LF
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            ++P+ +   WN +I  +  +G  + A++ + QML+ G++PD+ T   +L ACS    + 
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG R  H      G +  +     +VD++ + G +  A +    + V  DA +W ++L A
Sbjct: 177 EG-RVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAA 234


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/590 (39%), Positives = 358/590 (60%), Gaps = 3/590 (0%)

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D LD +    ++  P    S++  CAR  ++     IH ++       ++F+ N+LI++Y
Sbjct: 50  DTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLY 109

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G +  A RVFD M  RD+ SW S+IA Y Q++ P  A G    M +   +P+  T  
Sbjct: 110 CKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFA 169

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           SL               +H   ++  W  +DV +G+A++DMYA+ G ++ A AVF+ L  
Sbjct: 170 SLLKAAGASASSGIGEQIHALTVKYDWH-DDVYVGSALLDMYARCGRMDMAIAVFDQLES 228

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K+ +SWN LI G+A+ G     + +F  M+  N       TY S+  A + +GAL QG  
Sbjct: 229 KNGVSWNALIAGFARKGDGETTLLMFAEMQR-NGFEATHFTYSSVFSAIAGIGALEQGKW 287

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +HA +IK+      FV   ++DMY K G + DA  +F +V +   V WN++++    +G 
Sbjct: 288 VHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGL 347

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +A+  F +M   GV  + ITF+S+LTACSH GLV EG++YF MM+E + ++P + HY 
Sbjct: 348 GREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYV 406

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
            +VDL GRAG L  A  FI  MP++P A++WGALLG+CR+H N ++G  A+D +FE+D +
Sbjct: 407 TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPD 466

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + G  VL+ NIYA+ G+W+    VR + +  G+KK P  S +E+ N V +F   + THP+
Sbjct: 467 DTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPR 526

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            E+IY +   ++ +++  GYVP+  +VL  V+E E++  L  HSE++A+AF +I+ P  +
Sbjct: 527 SEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGA 586

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
            I+I KN+R+CGDCH+  ++IS++ +REI+VRD+NRFHHF  G CSCGDY
Sbjct: 587 TIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 211/380 (55%), Gaps = 6/380 (1%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           ++ AC   R+L D + IH  +    F   VF+  SL+H+YC+ G    AR++FD MP RD
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW ++I+GY Q+    EAL +L  M       +  T AS+L     S +   G  IH 
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             VK+    +++V + L++MYA+ G M  A+ VFDQ+  ++ VSWN++IA + +  D  T
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
               F  MQ+ G +    T  S+ S +A +      + VH  +++ G  +    +GN ++
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLS-AFVGNTIL 308

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G +  A  VF+ +  KDV++WN+++T +AQ GL  EA+  F+ M +C  ++ NQ
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCG-VHLNQ 367

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            T++SIL A SH G +++G +    + +  L  ++     +VD+ G+ G ++DA+   ++
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 509 VP-RSSSVPWNAIISCHGIH 527
           +P + ++  W A++    +H
Sbjct: 428 MPMKPTAAVWGALLGSCRMH 447



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 202/404 (50%), Gaps = 17/404 (4%)

Query: 30  AANSLQISPDCLEN-ESREID-----FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVF 80
           AA S  I  D L++ ++RE+      +  L  +C +   L   + +HA L  S    +VF
Sbjct: 41  AAASTGIIRDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVF 100

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
               L++ Y   G ++ +R  FD +  R++ +W S+I+ Y +     EA+       L  
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGM-LRG 159

Query: 141 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
             +P+ +TF  +LKA         G++IH   +K  +  DV+V ++LL MY R G  ++A
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
             +FD +  ++  SWNA+I+G+ + G+    L +  EM+  G      T +S+    A  
Sbjct: 220 IAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGI 279

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  +H +++K G   + FV N +++MYAK G M  A +VFD++ ++DVV+WNS++
Sbjct: 280 GALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSML 339

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            A+ Q      A   F  M++ G+  + +T +S+ +  +     +  +    F M + + 
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQY--FDMMKEYN 397

Query: 378 MEDVIIGN-AVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
           +E  I     VVD+  + G++N A      +P+K   + W  L+
Sbjct: 398 LEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL 441



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +HA ++ SG+  + F    +++ YA  G +  +R  FD +  ++V TWNSM++ 
Sbjct: 282 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA 341

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW 176
           + + G   EAV  F +     G+  +  TF  +L AC +   + +GK+    + +   E 
Sbjct: 342 FAQYGLGREAVTHFEEMR-KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEP 400

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
           ++    +++ +  R GL N A      MP++ + + W A++ G C+
Sbjct: 401 EIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCR 445


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/665 (37%), Positives = 376/665 (56%), Gaps = 11/665 (1%)

Query: 162 GKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+  H  ++K L      F+   L++MY +    N A+ L    P R   +W A+I+G  
Sbjct: 25  GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSV 84

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+G    AL     MR + +  +  T            + L G  +H   VK G   ++F
Sbjct: 85  QNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVF 144

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFTTMQ 337
           V  +  +MY+K G+   A ++FD+M ER++ +WN+ ++      + +D +TA   F   +
Sbjct: 145 VGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTA---FIEFR 201

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
             G +P+L+T  +  +  A  +  R  R +HGF+++ G F  DV + N ++D Y K   +
Sbjct: 202 HEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSG-FEADVSVANGLIDFYGKCHQV 260

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             +  +F G+   + +SW ++I  Y QN    +A  VF +      I P      S+L A
Sbjct: 261 GCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVF-LRARKEGIEPTDFMVSSVLSA 319

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + +  L  G  +H   +K C+  ++FV + LVDMYGKCG I+DA   F ++P  + V W
Sbjct: 320 CAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTW 379

Query: 518 NAIISCHGIHGQGDKALNFFRQML--DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           NA+I  +   GQ D A+  F +M      V P+++TFV +L+ACS +G V+ G   F  M
Sbjct: 380 NAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESM 439

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           +  +GI+P  +HY C+VDL GRAG +  A+ FI+ MP+RP  S+WGALLGA ++ G  EL
Sbjct: 440 RGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSEL 499

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G VA+D LFE+D  + G +VL+SN++A  G+WE    VR   +D G+KK  G S I   N
Sbjct: 500 GKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGN 559

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            V +F   + +H +  +I   L  L  +M++ GY+PD SF L D+EE+EK   +  HSE+
Sbjct: 560 AVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEK 619

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           +A+AFG+IS P   PI+I KNLR+CGDCH+  KFIS I  REIIVRD+N FH F+D  CS
Sbjct: 620 IALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCS 679

Query: 816 CGDYW 820
           C DYW
Sbjct: 680 CRDYW 684



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 167/607 (27%), Positives = 289/607 (47%), Gaps = 34/607 (5%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           C++L        +  +   + + F    LVN Y+ L   + ++        R+V TW ++
Sbjct: 21  CSRLGRAAHAQIIKTLDNPLPS-FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTAL 79

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
           I+  V+ GR + A+  F      S ++P+ +TFP   KA    R+ + GK++H   +K G
Sbjct: 80  IAGSVQNGRFTSALFHFSNMRRDS-IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAG 138

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
              DVFV  S   MY + GL   ARK+FD+MP R+  +WNA +S     G   +AL    
Sbjct: 139 QISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFI 198

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           E R EG   + IT  + L  CA +  +  G  +H ++++ G E ++ V+N LI+ Y K  
Sbjct: 199 EFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCH 258

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  +  +F  + + + VSW S+I +Y Q+++   A   F   ++ GI+P    + S+ S
Sbjct: 259 QVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLS 318

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L+     +SVH   + +   + ++ +G+A+VDMY K G I  A   F+ +P ++++
Sbjct: 319 ACAGLSVLEVGKSVHTLAV-KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLV 377

Query: 414 SWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +WN +I GYA  G A  A+ +F +M    + + PN  T+V +L A S  G++  G++I  
Sbjct: 378 TWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFE 437

Query: 473 RVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQG 530
            +  +  +        C+VD+ G+ G ++ A     ++P R +   W A++    + G+ 
Sbjct: 438 SMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKS 497

Query: 531 D----KALNFFR-QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           +     A N F    LD G   +H+   ++  A   +G   E       M+ + GIK   
Sbjct: 498 ELGKVAADNLFELDPLDSG---NHVLLSNMFAA---AGRWEEATLVRKEMK-DVGIK--- 547

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR--- 642
           K  GC     G A H+  A +          A +        ++ G ME      D    
Sbjct: 548 KGAGCSWITAGNAVHVFQAKDTSHERNSEIQAML-------AKLRGEMEAAGYIPDTSFA 600

Query: 643 LFEVDSE 649
           LF+++ E
Sbjct: 601 LFDLEEE 607


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 277/832 (33%), Positives = 438/832 (52%), Gaps = 37/832 (4%)

Query: 16  LLPLLQA----HRPLFSAAANSLQISPDCLENES--REIDFDDLFQSCTKLHHV------ 63
           LLP L      HR  F+A A +LQ   D L + +    +   D F    +L         
Sbjct: 16  LLPTLSCPVAPHRRGFAAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDA 75

Query: 64  ---KRLHALLVVSGKIKTV--FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
              + +H  +V  G +  +  F +  L+N Y  LG L+ +R  FD +  RN+ ++ +++ 
Sbjct: 76  RGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQ 135

Query: 119 VYVRCGRLSEAVDCFY----------QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
            + + G    A   F           QF LT+ L+        +      L  G  +H  
Sbjct: 136 AHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL------AIAMDAAGLAGG--VHSC 187

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
             KLG + + FV + L+  Y    L + A  +F+ +  +D+  W AM+S Y ++     A
Sbjct: 188 AWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
             +  +MR+ G   +P  + S+L       +++ G  IH   +K   +    V   L++M
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G ++ A   F+ +   DV+  + +I+ Y QSN    A   F  + ++ + P+  +L
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            S+      +      + +H   ++ G    D+ +GNA++D YAK   ++S+  +F  L 
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIKIG-HESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
             + +SWNT++ G++Q+GL  EA+ VF  M+   ++   Q TY S+L A +   ++R   
Sbjct: 427 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAA-QMPCTQVTYSSVLRACASTASIRHAG 485

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +IH  + K+    D  +   L+D Y KCG I DA+ +F  +     + WNAIIS + +HG
Sbjct: 486 QIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHG 545

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           Q   AL  F +M    V  + ITFV+LL+ CS +GLV+ G   F  M+ + GIKP ++HY
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHY 605

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            C+V L GRAG L  A  FI ++P  P A +W ALL +C IH N+ LG  +++++ E++ 
Sbjct: 606 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEP 665

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           ++   YVL+SN+YA  G  + V  +R   R+ G++K PG S +E+  ++  F  G+  HP
Sbjct: 666 QDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHP 725

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
               I   L  L  K    GY+PD + VL DV++++K  +L  HSERLA+A+G++ +PP 
Sbjct: 726 DMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPG 785

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            PI+I KNLR C DCH     IS+I +REIIVRD NRFHHF+DG CSCGDYW
Sbjct: 786 HPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/616 (39%), Positives = 369/616 (59%), Gaps = 16/616 (2%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPI--TVASILPVCARSDNILSGLLIHLYI 270
           N +I   C+ GN  +AL +L          +P   T   ++  CA+ +++  GL +H  +
Sbjct: 51  NQLIQSLCKGGNLKQALHLL------CCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCL 104

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           V  G + + F++  LINMY + G +  AL+VFD+  ER +  WN++  A           
Sbjct: 105 VDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELL 164

Query: 331 GFFTTMQQAGIQPDLLTLVSL--TSIVAQLNDC--RNSRSVHGFIMRRGWFMEDVIIGNA 386
             +  M   G   D  T   +    +V++L+ C  R  + +H  I+R G +  ++ +   
Sbjct: 165 DLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHG-YEANIHVMTT 223

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM--EECNEI 444
           ++D+YAK G ++ A +VF  +P K+ +SW+ +I  +A+N +  +A+E+FQ+M  E CN +
Sbjct: 224 LLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSV 283

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN  T V++L A + + AL QG  IH  +++  L   + V   L+ MYG+CG +     
Sbjct: 284 -PNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQR 342

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F  + +   V WN++IS +G+HG G KA+  F  M+ +GV P +I+F+++L ACSH+GL
Sbjct: 343 VFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGL 402

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG+  F  M  ++ I P ++HY CMVDL GRA  LG A   I++M   P  ++WG+LL
Sbjct: 403 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLL 462

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           G+CRIH N+EL   AS  LFE++  N G YVL+++IYA    W     V  L   RGL+K
Sbjct: 463 GSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQK 522

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S IEV  KV  F + +  +P+ E+I+  L  L+ +MK+ GYVP  + VL D++E+E
Sbjct: 523 LPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEE 582

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KE I+  HSE+LA+AFG+I++     I+I KNLR+C DCH  TKFIS+   REI+VRD N
Sbjct: 583 KERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVN 642

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF+DG+CSCGDYW
Sbjct: 643 RFHHFRDGVCSCGDYW 658



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 13/324 (4%)

Query: 40  CLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C E    +  F+ L  SC +   L +   +H  LV SG  +  F +TKL+N Y  LG + 
Sbjct: 71  CCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSID 130

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +   FD    R +Y WN++       G   E +D + Q     G   D +T+  VLKAC
Sbjct: 131 RALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWI-GTPSDRFTYTYVLKAC 189

Query: 157 R-------NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
                    L  GK+IH  +L+ G+E ++ V  +LL +Y +FG  + A  +F  MP ++ 
Sbjct: 190 VVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF 249

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIH 267
            SW+AMI+ + ++   ++AL++   M  E  +  P  +T+ ++L  CA    +  G LIH
Sbjct: 250 VSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIH 309

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            YI++  L+  L V N LI MY + G +    RVFD M +RDVVSWNS+I+ Y       
Sbjct: 310 GYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGK 369

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSL 351
            A   F  M   G+ P  ++ +++
Sbjct: 370 KAIQIFENMIHQGVSPSYISFITV 393



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 130/270 (48%), Gaps = 6/270 (2%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   K +HA ++  G    +   T L++ YA  G +S++   F  +  +N  +W++
Sbjct: 195 SVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSA 254

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRNLV---DGKKIHCSVLK 171
           MI+ + +     +A++ F      +    P+  T   +L+AC  L     GK IH  +L+
Sbjct: 255 MIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILR 314

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
              +  + V  +L+ MY R G   + +++FD+M  RD  SWN++IS Y   G   +A+ I
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYA 290
            + M  +GVS   I+  ++L  C+ +  +  G +L    + K+ +   +     ++++  
Sbjct: 375 FENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 291 KFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           +   +  A+++ + M  E     W S++ +
Sbjct: 435 RANRLGEAIKLIEDMHFEPGPTVWGSLLGS 464


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 243/679 (35%), Positives = 393/679 (57%), Gaps = 6/679 (0%)

Query: 50  FDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++CT L    H    H  ++V G     + +T L+NFY+  G    +R  FD + 
Sbjct: 51  FPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMD 110

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RNV  W +MI  Y R G    A    Y      G++P   T   +L     LV  + +H
Sbjct: 111 DRNVVPWTTMIGCYTRAGEHDVAFS-MYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLH 169

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V++ GF  DV +A S+L++YC+ G    A+ LF+ M  RD  SWN+++SGY Q GN  
Sbjct: 170 ACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIR 229

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           E L +L  M+ +G+  D  T  S++   A    +  G ++H +I++ GLE +  +  +LI
Sbjct: 230 EVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLI 289

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY K G +  A R+F+ MM +DV+SW ++I+   Q++    A   F  M ++ + P   
Sbjct: 290 GMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTA 349

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+ +  A+L       SVHG+I+R+   + D+   N++V MYAK G +  +C+VF+ 
Sbjct: 350 TIASVLAACAELGSFPLGTSVHGYILRQRIKL-DIPSQNSLVTMYAKCGHLEQSCSVFDR 408

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  +D++SWN +++G+AQNG   +A+ +F  M +  +  P+  T VS+L A + +GAL Q
Sbjct: 409 MSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALHQ 467

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  IH  V K+CL   + + T LVDMY KCG +  A   F ++P+   V W++II+ +G 
Sbjct: 468 GKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGS 527

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG+G+ AL  +   L  G++P+H+ ++S+L+ACSH+GLV +G  +FH M ++FGI+P L+
Sbjct: 528 HGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLE 587

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           H  C+VDL  RAG +  A++F + M  +P   + G LL ACR  GN+ELG + +  +  +
Sbjct: 588 HRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVIL 647

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
              N G YV +++ YA++ +W+GV EV +  +   LKK PGWS IE++  +  F+T + +
Sbjct: 648 KPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFFTDHSS 707

Query: 707 HPKYEKIYDELRNLTAKMK 725
           HP++E+I D +  L  + +
Sbjct: 708 HPQFEEIIDRVLLLNKRRR 726



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 179/584 (30%), Positives = 298/584 (51%), Gaps = 27/584 (4%)

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCS 168
           ++N++I+     G   + +   Y   L++   PD +TFP ++KAC +L     G   H  
Sbjct: 15  SYNAIINRLSTAGAFCDVL-LTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQR 73

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           V+  G+  D ++A SL++ Y +FG    ARK+FD M  R+   W  MI  Y ++G    A
Sbjct: 74  VIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL-------IHLYIVKHGLEFNLFV 281
             + + MR +G+    +T+            +LSG+L       +H  ++++G   ++ +
Sbjct: 134 FSMYNIMRRQGIQPSSVTML----------GLLSGVLELVHLQCLHACVIQYGFGSDVAL 183

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           +N+++N+Y K G +  A  +F+ M  RDV+SWNS+++ Y Q  +          M+  GI
Sbjct: 184 ANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGI 243

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD  T  SL S  A  +     + VHG I+R G   +D  I  +++ MY K G +NSA 
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG-LEQDSHIETSLIGMYLKCGNVNSAF 302

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +FEG+  KDVISW  +I+G  QN  A  A+ VF+ M + + + P+  T  S+L A + +
Sbjct: 303 RIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAEL 361

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G+   G  +H  +++  +  D+     LV MY KCG ++ + S+F ++ R   V WNAI+
Sbjct: 362 GSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIV 421

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S H  +G   KAL  F +M     RPD IT VSLL AC+  G + +G ++ H    +  +
Sbjct: 422 SGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCL 480

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG-AVAS 640
            P +     +VD++ + G LG A      MP + D   W +++     HG  E    + S
Sbjct: 481 GPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSHGKGETALRMYS 539

Query: 641 DRLFE-VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           D L   +   +V Y  ++S    N    +G+    S+ +D G++
Sbjct: 540 DFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIE 583


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/617 (38%), Positives = 376/617 (60%), Gaps = 3/617 (0%)

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSG 263
           P R + S+N +I  + ++G+  +AL +  EM  +  VS D  TVA+ +  C+R  ++  G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +  Y  K G   + FV N+LI+MYA  G +  A  +F  +  + V++WN++IA Y ++
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            D       F  M +     D +TL+S+ +   +L D    + +  +   +G  +    +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKG-MLRSRNL 309

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
             A+VDMYAK G ++ A  +F+ +  +DV++W+ +I+GY Q+    EA+ +F  M+   E
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQG-TE 368

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           +NPN  T VS+L A + +GAL  G  +H+ + +  L   V + T LVD Y KCG I DA+
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
             F  +P  ++  W A+I     +G+  +AL  F  ML+  + P  +TF+ +L ACSH  
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV EG+R+F  M +++GI P ++HYGCMVDL GRAG +  A+ FI+NMP+ P+A +W AL
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           L AC +H N+E+G  A  ++  +D  + G Y+L+SN YA+VG+W+    VR   +++G++
Sbjct: 549 LSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVE 608

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K PG S IE+   +  F+  +  HP+  +IY+++  +   +K +GY+P+ +    DV+E 
Sbjct: 609 KIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEY 668

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EK+  ++ HSE+LAIAFG++ S P + I++ KNLRVC DCH+ TK IS++  REIIVRD 
Sbjct: 669 EKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDR 728

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHFKDG+CSC DYW
Sbjct: 729 NRFHHFKDGLCSCNDYW 745



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 250/493 (50%), Gaps = 19/493 (3%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSS-------TKLVNFYANLGDLSFSRHTFDHISY--RNV 110
           L  V +LHA L+ SG + T   S         L     +   LS++   F    +  R+ 
Sbjct: 76  LRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSA 135

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
            ++N +I  ++R G   +A+  F +    + + PD +T    +K+C  + D   G+ +  
Sbjct: 136 RSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQA 195

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
              K GF  D FV  SL+HMY   G    A  LF  + V+   +WNAMI+GY ++G+  E
Sbjct: 196 YAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKE 255

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
            +++   M       D +T+ S+   C R  +   G  I  Y  + G+  +  ++  L++
Sbjct: 256 VVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVD 315

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK G +  A R+FD+M  RDVV+W+++I+ Y QS+    A   F  MQ   + P+ +T
Sbjct: 316 MYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVT 375

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           +VS+ S  A L      + VH +I R+   +  VI+G A+VD YAK G I  A   FE +
Sbjct: 376 MVSVLSACAVLGALETGKWVHSYIRRKDLPL-TVILGTALVDFYAKCGCIKDAVKAFESM 434

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           PV++  +W  LI G A NG + EA+E+F  M E N I P   T++ +L A SH   + +G
Sbjct: 435 PVRNTWTWTALIKGMASNGRSREALELFSSMLEAN-IEPTDVTFIGVLLACSHGCLVEEG 493

Query: 468 IKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
            +    + ++  +C  +    C+VD+ G+ G ID+A      +P   ++V W A++S   
Sbjct: 494 RRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACT 553

Query: 526 IHGQ---GDKALN 535
           +H     G++AL 
Sbjct: 554 VHKNVEIGEEALK 566


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/664 (37%), Positives = 377/664 (56%), Gaps = 4/664 (0%)

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL-ANVARKLFDDMPVR-DSGSWNAMI 216
           L   K  HC +L+L    D  + + +L     F   A     +F   P   ++  +N MI
Sbjct: 17  LKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMI 76

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
            G         A+ +   M    +  D  T + +L  CAR +    G++IH  + K G +
Sbjct: 77  RGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFD 136

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++FV  N++  Y+K G +R A +VFD M+ ++VVSW  +I    +      A   F  +
Sbjct: 137 CDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGL 196

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            ++G++PD   +V +    A+L D  + R +    MR      +V +  ++VDMY K G 
Sbjct: 197 LESGLRPDGFVIVRVLRACARLGDLESGRWIDR-CMRECGLSRNVFVATSLVDMYTKCGS 255

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A  VF+G+  KD++ W+ +I GYA NGL  EAIE+F  M + N + P+    V  L 
Sbjct: 256 MEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVN-VRPDCYAMVGALS 314

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           + + +GAL  G      +       +  + T L+D Y KCG +++A+ ++  +     V 
Sbjct: 315 SCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVV 374

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           +NA+IS   ++GQ   A   F QM   G+ P+  TFV LL  C+H+GLV +G+ YF+ M 
Sbjct: 375 FNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMS 434

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
            +F + P ++HYGCMVDL  RAG L  AHN I+ MP++ +  +WG+LLG CR+H   +L 
Sbjct: 435 HDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLA 494

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
                +L E++  N G+YVL+SNIY+   +W+  +++RS   ++G++K PG+S +EV+  
Sbjct: 495 EHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGV 554

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F  G+ +HP  +KIY++L +L   +K  GY P   FVL DVEE+EKEH L  HSE+L
Sbjct: 555 VHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKL 614

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           A+AF +IS+  K  I++ KNLRVCGDCH   K IS++T REI++RD+NRFH F DG CSC
Sbjct: 615 AVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSC 674

Query: 817 GDYW 820
            DYW
Sbjct: 675 RDYW 678



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 223/444 (50%), Gaps = 18/444 (4%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKI 165
           N + +N+MI   V   R + AV   Y     + + PD +TF  VLKAC  L     G  I
Sbjct: 68  NTFLYNTMIRGMVSKDRFNNAVH-LYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMI 126

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  V K GF+ DVFV  +++  Y + G    A K+FDDM V++  SW  MI G  + G  
Sbjct: 127 HSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKF 186

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA+D+   +   G+  D   +  +L  CAR  ++ SG  I   + + GL  N+FV+ +L
Sbjct: 187 REAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSL 246

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K G M  A  VFD M+E+D+V W+++I  Y  +  P  A   F  M++  ++PD 
Sbjct: 247 VDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDC 306

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
             +V   S  A L          G +M    F+ + ++G +++D YAK G +  A  V++
Sbjct: 307 YAMVGALSSCASLGALELGNWAKG-LMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYK 365

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +  KD + +N +I+G A  G    A  VF  M +   I PN+ T+V +L   +H G + 
Sbjct: 366 MMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG-IPPNEHTFVGLLCGCTHAGLVD 424

Query: 466 QGIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
            G     R   N +  D  V        C+VD+  + G +D+A +L   +P +++ + W 
Sbjct: 425 DG-----RHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWG 479

Query: 519 AIISCHGIHGQGDKALNFFRQMLD 542
           +++    +H +   A +  +Q+++
Sbjct: 480 SLLGGCRLHRETQLAEHVLKQLIE 503



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 138/459 (30%), Positives = 209/459 (45%), Gaps = 29/459 (6%)

Query: 29  AAANSLQISPDCLENESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKL 85
           A+ +   I PD          F  + ++C +L   H    +H+L+  +G    VF  T +
Sbjct: 93  ASMHKAAIVPD-------SFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNV 145

Query: 86  VNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
           V FY+  G L  +   FD +  +NV +W  MI   +  G+  EAVD F    L SGLRPD
Sbjct: 146 VCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGL-LESGLRPD 204

Query: 146 FYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
            +    VL+AC  L D   G+ I   + + G   +VFVA SL+ MY + G    AR +FD
Sbjct: 205 GFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFD 264

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            M  +D   W+AMI GY  +G   EA+++  EMR   V  D   +   L  CA    +  
Sbjct: 265 GMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALEL 324

Query: 263 GLLIHLYIVKHGLEFNLFVSN-----NLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           G        K  + +  F+SN     +LI+ YAK G M  AL V+  M E+D V +N++I
Sbjct: 325 G-----NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVI 379

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           +          A G F  M + GI P+  T V L           + R     +      
Sbjct: 380 SGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSV 439

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQ 436
              +     +VD+ A+ G ++ A  + +G+P+K +VI W +L+ G     L  E      
Sbjct: 440 TPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCR---LHRETQLAEH 496

Query: 437 MMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARV 474
           ++++  E+ P N G YV +   YS      +  KI + V
Sbjct: 497 VLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTV 535


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/756 (34%), Positives = 416/756 (55%), Gaps = 8/756 (1%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           ++VSG  + V  +  L++   NLG +  +   F  +  R+  +WN+++S+Y   G  S++
Sbjct: 171 VIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKS 230

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLH 186
              F        LR D  T   ++  C +   +  G  +H   L+ G    + V  +L++
Sbjct: 231 FRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVN 290

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY   G    A  LF +M  RD  SWN MIS Y Q+GN ++AL  L ++       D +T
Sbjct: 291 MYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMT 350

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
            +S L  C+    ++ G ++H   ++  L  NL V N+LI MY K   +  A R+F  M 
Sbjct: 351 FSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN-SR 365
             DVVS N +I +Y    D   A   F  M++  ++ + +T+V++       ND RN   
Sbjct: 411 NHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGL 470

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H + +  G F+ D  + N+++ MYAK G + S+  VF+ +  + V+SWN +I    Q+
Sbjct: 471 PLHAYTIHAG-FLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQH 529

Query: 426 GLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           G   E++++F  M  + N ++         + + + + +L +G+++H   +K  L  D  
Sbjct: 530 GHGEESLKLFMDMRHDGNGLD--HICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSH 587

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V    +DMYGKCG++D+ + +           WN +IS +  +G   +A   F+ M+  G
Sbjct: 588 VVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVG 647

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
             PD++TFV+LL+ACSH+GLV +G  Y++ M   FG+ P +KH  C+VD+ GR G    A
Sbjct: 648 RTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEA 707

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
             FI++MPV P+  IW +LL + R H N+++G  A+ RL E+D  +   YVL+SN+YA  
Sbjct: 708 EKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATS 767

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
            +W  VD VRS  +   L K P  S ++   +V  F  G+ +H   +KIY +L  +  K+
Sbjct: 768 ARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKL 827

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           + +GYV D S  L D +E++KE  L +HSE+LA+A+G+I+ P    ++IFKNLRVC DCH
Sbjct: 828 REVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCH 887

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              K +S + +REI++RD  RFHHFK G CSC D+W
Sbjct: 888 LVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 279/571 (48%), Gaps = 10/571 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL   +G +  V+  T L++ Y +   +  ++  F  +  RNV +W +++      G 
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
           L EA+  +Y+      +  +   F  V+  C +L D   G ++   V+  G +  V VA 
Sbjct: 126 LEEALG-YYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVAN 184

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG-VS 241
           SL+ M    G  + A KLF  M  RD+ SWNA++S Y   G   ++  +  +MR  G + 
Sbjct: 185 SLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLR 244

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D  T+ S++ VCA SD +  G  +H   ++ GL   + V N L+NMY+  G +  A  +
Sbjct: 245 HDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFL 304

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F  M  RD++SWN++I++Y Q+ + + A      +      PD +T  S     +     
Sbjct: 305 FWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGAL 364

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            + R VH   ++      ++++GN+++ MY K   I  A  +F+ +P  DV+S N LI  
Sbjct: 365 MDGRMVHAMTLQLS-LHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGS 423

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ-GIKIHARVIKNCLC 480
           YA     ++A++VF  M    E+  N  T V+IL +++    LR  G+ +HA  I     
Sbjct: 424 YAVLEDGTKAMQVFFWMRR-GEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFL 482

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D +V+  L+ MY KCG ++ + ++F ++   S V WNA+I+ +  HG G+++L  F  M
Sbjct: 483 SDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDM 542

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
             +G   DHI     +++ +    + EG +  H +  + G+          +D++G+ G 
Sbjct: 543 RHDGNGLDHICLAECMSSSASLASLEEGMQ-LHGLGLKCGLGNDSHVVNAAMDMYGKCGK 601

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +      + +  +RP    W  L+     +G
Sbjct: 602 MDEMLKMLPDPAIRPQ-QCWNTLISGYARYG 631



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 266/538 (49%), Gaps = 19/538 (3%)

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACRNLVD 161
           +R   +W + IS  VRCGR S A      F++  G+R        +    ++ AC    +
Sbjct: 5   HRTPSSWYTAISGCVRCGRDSTA------FSMLRGMRERGVPLSGFALASLVTACERWEE 58

Query: 162 GKK----IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           G+     IH    K G   +V++  +LLH+Y        A++LF +MP R+  SW A++ 
Sbjct: 59  GRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMV 118

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
               +G+  EAL     MR E ++ +    A+++ +C   ++ ++GL +  +++  GL+ 
Sbjct: 119 ALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQR 178

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            + V+N+LI+M    G +  A ++F +M ERD VSWN++++ Y        +   F+ M+
Sbjct: 179 QVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMR 238

Query: 338 QAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           + G ++ D  TL SL S+ A  +       VH   +R G     + + NA+V+MY+  G 
Sbjct: 239 RGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTG-LHSYIPVVNALVNMYSSAGK 297

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A  +F  +  +D+ISWNT+I+ Y QNG   +A++    +   NE  P++ T+ S L 
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNE-GPDRMTFSSALG 356

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A S  GAL  G  +HA  ++  L  ++ V   L+ MYGKC  I+DA  +F  +P    V 
Sbjct: 357 ACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVS 416

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
            N +I  + +   G KA+  F  M    V+ ++IT V++L + + S  +       H   
Sbjct: 417 CNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYT 476

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
              G          ++ ++ + G L  ++N  Q +  R   S W A++ A   HG+ E
Sbjct: 477 IHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVS-WNAMIAANVQHGHGE 533



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 240/491 (48%), Gaps = 25/491 (5%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H+L + +G    +     LVN Y++ G L+ +   F ++S R++ +WN+MIS YV+ G 
Sbjct: 269 VHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGN 328

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAA 182
             +A+    Q  L +   PD  TF   L AC +   L+DG+ +H   L+L    ++ V  
Sbjct: 329 NMDALKTLGQL-LHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGN 387

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+ MY +      A ++F  MP  D  S N +I  Y    +  +A+ +   MR   V +
Sbjct: 388 SLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKL 447

Query: 243 DPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           + IT+ +IL     S+++ + GL +H Y +  G   + +VSN+LI MYAK G +  +  V
Sbjct: 448 NYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNV 507

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +++ R VVSWN++IAA  Q      +   F  M+  G   D + L    S  A L   
Sbjct: 508 FQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASL 567

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                +HG  ++ G    D  + NA +DMY K G ++    +     ++    WNTLI+G
Sbjct: 568 EEGMQLHGLGLKCG-LGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISG 626

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV------- 474
           YA+ G   EA E F+ M       P+  T+V++L A SH G + +GI  +  +       
Sbjct: 627 YARYGYFKEAEETFKHMISVGR-TPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVS 685

Query: 475 --IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
             IK+C+        C+VD+ G+ GR  +A      +P   + + W +++S    H   D
Sbjct: 686 PGIKHCV--------CIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLD 737

Query: 532 KALNFFRQMLD 542
                 +++L+
Sbjct: 738 IGRKAAKRLLE 748


>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
 gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
          Length = 533

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/536 (42%), Positives = 347/536 (64%), Gaps = 6/536 (1%)

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLL 346
           MYAK G+     ++FD+M  +D+V W ++I AYEQ+  P  A   F  MQQ  G+  D +
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
            +VS+ S V QL D +N+ +VHG+  R+   +E++ +GN+++ M+ K G    A  VF+ 
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKS-LIEELCVGNSILAMHTKCGNTEKARLVFDM 119

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  +DVISWN++++GY QNG A+EA+ +F  M + ++  P   T + ++ A +++G    
Sbjct: 120 MMERDVISWNSMLSGYTQNGQATEALLLFDEMRD-SDCQPTPVTALIMVSACAYLGFRHL 178

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS--SSVPWNAIISCH 524
           G K H  ++ + +  D  ++  L+DMY KCG ++ A+ LF  +P +  ++  WN +IS +
Sbjct: 179 GRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGY 238

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           G+HG G +AL  F +M +EGV P+H TF S+L+ACSH+GL+ EG++ F  M+    +   
Sbjct: 239 GMHGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKR-LSVTLE 297

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
            KH+ C+VD+ GRAG L  A + I+ MP  P   +WGALL AC+IHGNMELG  A+  L 
Sbjct: 298 DKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLL 357

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           +++  + GYYVLMSNIYA   KW+ V ++R   +++GLKK   +S IE    +  F+T +
Sbjct: 358 QLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTAD 417

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
           + +P   ++Y ++ +L  +MK  GYVPD S  L DVEE++KE +L  HSE+LA+AFG++ 
Sbjct: 418 QENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLK 477

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             P   I++ KNLRVC DCH+  K+IS I +R+IIVRD+NRFHHF+ G CSC DYW
Sbjct: 478 IDPGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/376 (33%), Positives = 193/376 (51%), Gaps = 10/376 (2%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPI 245
           MY + GL    RK+FD+M  +D   W AMI+ Y Q+    EAL +  +M+ E G+  D I
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            V S+     +  ++ +   +H Y  +  L   L V N+++ M+ K G    A  VFD M
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           MERDV+SWNS+++ Y Q+     A   F  M+ +  QP  +T + + S  A L      R
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 366 SVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLP--VKDVISWNTLITGY 422
             H FI+     ME D  + NA++DMYAK G +  A  +F G+P   ++  SWN LI+GY
Sbjct: 181 KFHDFIVDSR--MEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGY 238

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
             +G   EA+E+F  M+E   + PN  T+ SIL A SH G + +G K  A + +  +  +
Sbjct: 239 GMHGHGKEALELFSRMQE-EGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLE 297

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPR-SSSVPWNAIISCHGIHGQGDKALNFFRQML 541
                C+VDM G+ G + +A  L  ++P   S   W A++    IHG  +        +L
Sbjct: 298 DKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLL 357

Query: 542 DEGVRPDHITFVSLLT 557
              + P+H  +  L++
Sbjct: 358 Q--LEPNHTGYYVLMS 371



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 6/326 (1%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            YA  G     R  FD +S +++  W +MI+ Y +  +  EA+  F +     GL  D  
Sbjct: 1   MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60

Query: 148 TFPPVLKACRNLVDGKK---IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
               V  A   L D K    +H    +     ++ V  S+L M+ + G    AR +FD M
Sbjct: 61  AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
             RD  SWN+M+SGY Q+G A EAL + DEMR       P+T   ++  CA       G 
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM--MERDVVSWNSIIAAYEQ 322
             H +IV   +E +  +SN L++MYAK G +  A+ +F+ +   ER+  SWN +I+ Y  
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                 A   F+ MQ+ G++P+  T  S+ S  +        R     + R    +ED  
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKH 300

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLP 408
               VVDM  + G++  A  + + +P
Sbjct: 301 HA-CVVDMLGRAGLLQEAFDLIKEMP 325



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 10/237 (4%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           I+ +     ++  +   G+   +R  FD +  R+V +WNSM+S Y + G+ +EA+  F +
Sbjct: 91  IEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDE 150

Query: 136 FTLTSGLRPDFYTFPPVLKAC-----RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
               S  +P   T   ++ AC     R+L  G+K H  ++    E D  ++ +L+ MY +
Sbjct: 151 MR-DSDCQPTPVTALIMVSACAYLGFRHL--GRKFHDFIVDSRMEIDTNLSNALMDMYAK 207

Query: 191 FGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
            G    A  LF+ +P   R++GSWN +ISGY   G+  EAL++   M+ EGV  +  T  
Sbjct: 208 CGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFTFT 267

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           SIL  C+ +  I  G      + +  +         +++M  + G+++ A  +  +M
Sbjct: 268 SILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEM 324


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/693 (37%), Positives = 402/693 (58%), Gaps = 41/693 (5%)

Query: 138 LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF-GL 193
           L SG  PD   FP VLK+C   ++L  G+ +H  +++LG  +D++   +L++MY +F  L
Sbjct: 2   LASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSL 61

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQS---GNAVEALDI---LDEMRLEGVSMDPITV 247
                + F D         + M+ G  +    G    + D+   LDE R+ G+  +    
Sbjct: 62  EEGGVQRFCD---------SKMLGGIPEPREIGKCSNSHDLPCELDE-RVAGIDQNGD-- 109

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
                   +  NIL  +  +  +   G   +++      + Y   G +R   +VF+ M +
Sbjct: 110 ------LNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYY--LGSLR---KVFEMMPK 158

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           RD+VSWN++I+   Q+     A      M  A ++PD  TL S+  I A+  +    + +
Sbjct: 159 RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEI 218

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HG+ +R G +  DV IG++++DMYAK   ++ +C VF  LP  D ISWN++I G  QNG+
Sbjct: 219 HGYAIRNG-YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGM 277

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
             E ++ FQ M    +I PN  ++ SI+PA +H+  L  G ++H  +I++    +VF+A+
Sbjct: 278 FDEGLKFFQQML-IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 336

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            LVDMY KCG I  A  +F ++     V W A+I  + +HG    A++ F++M  EGV+P
Sbjct: 337 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 396

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           +++ F+++LTACSH+GLV E  +YF+ M +++ I P L+HY  + DL GR G L  A+ F
Sbjct: 397 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 456

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I +M + P  S+W  LL ACR+H N+EL    S +LF VD +N+G YVL+SNIY+  G+W
Sbjct: 457 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 516

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           +   ++R   RD+G+KK P  S IE+ NKV  F  G+++HP Y++I + L+ L  +M+  
Sbjct: 517 KDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMERE 576

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GYV D + VL DVEE++K ++L SHSERLAI FGIIS+P  + I++ KNLRVC DCH  T
Sbjct: 577 GYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTAT 636

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KFIS+I  REI+      F+ F D +      W
Sbjct: 637 KFISKIVGREIV------FYFFLDEVGVLNVKW 663



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 207/428 (48%), Gaps = 23/428 (5%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL Q    L+ V     +    GK   V+S  +  ++Y  LG L   R  F+ +  R++ 
Sbjct: 109 DLNQMSNILYQVNTYKKVFD-EGKTSDVYSKKEKESYY--LGSL---RKVFEMMPKRDIV 162

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDGKKIHCS 168
           +WN++IS   + G   +A+    +    + LRPD +T     P+     NL+ GK+IH  
Sbjct: 163 SWNTVISGNAQNGMHEDALMMVREMG-NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 221

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            ++ G++ DVF+ +SL+ MY +    + + ++F  +P  D  SWN++I+G  Q+G   E 
Sbjct: 222 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 281

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L    +M +  +  + ++ +SI+P CA    +  G  +H YI++   + N+F+++ L++M
Sbjct: 282 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 341

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G +R A  +FD+M   D+VSW ++I  Y        A   F  M+  G++P+ +  
Sbjct: 342 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 401

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           +++ +  +       +      + +    +  +    AV D+  ++G +  A      + 
Sbjct: 402 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 461

Query: 409 VKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNE----INP-NQGTYVSILPAYSHVG 462
           ++   S W+TL+        A    +  ++ E+ ++    ++P N G YV +   YS  G
Sbjct: 462 IEPTGSVWSTLLA-------ACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAG 514

Query: 463 ALRQGIKI 470
             +   K+
Sbjct: 515 RWKDARKL 522



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 13/210 (6%)

Query: 48  IDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  +  +C   T LH  K+LH  ++ S     VF ++ LV+ YA  G++  +R  FD 
Sbjct: 298 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 357

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG 162
           +   ++ +W +MI  Y   G   +A+  F +  +  G++P++  F  VL AC +  LVD 
Sbjct: 358 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV-EGVKPNYVAFMAVLTACSHAGLVDE 416

Query: 163 KKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGY 219
              + + +   +     +   A++  +  R G    A +   DM +  +GS W+ +++  
Sbjct: 417 AWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAA- 475

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           C+    +E   + +++  +  ++DP  + +
Sbjct: 476 CRVHKNIE---LAEKVSKKLFTVDPQNIGA 502


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/516 (44%), Positives = 326/516 (63%), Gaps = 33/516 (6%)

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M   G++P+  TL ++    A +      +  H +I++ G F  DV++  A+V MYA+ G
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMG-FESDVVVQTALVHMYARCG 59

Query: 396 IINSACAVFEGLPVK-------------------------------DVISWNTLITGYAQ 424
            +  A  VF+ +  +                               DV+SW  +I GYAQ
Sbjct: 60  SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NG   E++ VF  M +   +  ++    S+L A + + AL  G + HA V+++    D+ 
Sbjct: 120 NGYGDESLNVFNQMRKTG-MKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIV 178

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V + LVDMY K G ++DA  +F ++P+ + V WN+II+    HG+G+ A+  F QML  G
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           ++P+ I+FV +L+ACSH+GLV+EG+ YF++M + +GI P + HY CM+DL GRAG L  A
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEA 298

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
            NFI  MPV PD S+WGALLGACRIHGN EL    ++ L  ++ +  G YVL+SNIYA  
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G+W+   +VR L +DRG+ K PG+S IEV   +  F  G  +HP+ ++I++ L +L+ KM
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKM 418

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           K+ GYVP+K+FVLQDVE+DEKE  L+ HSE+LAIAFGII++ P + I++ KNLRVCGDCH
Sbjct: 419 KAAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCH 478

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              KFIS    R+I+VRD+NRFHHFKDG CSCGDYW
Sbjct: 479 TVIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 176/337 (52%), Gaps = 35/337 (10%)

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM--- 294
           +GV  +  T+++++  CA   ++  G   H YI+K G E ++ V   L++MYA+ G    
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 295 ----------------------------MRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
                                       M+ AL++F +M ERDVVSW ++IA Y Q+   
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             +   F  M++ G++ D   + S+ S  A L      R  H ++++ G F  D+++G+A
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSG-FALDIVVGSA 182

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           +VDMYAK G +  AC VF+ +P ++ +SWN++ITG AQ+G  ++A+ +F+ M +   I P
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG-IKP 241

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           N+ ++V +L A SH G + +G      + +N  +  DV   TC++D+ G+ G +D+A + 
Sbjct: 242 NEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF 301

Query: 506 FYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQML 541
              +P    V  W A++    IHG  + A      +L
Sbjct: 302 INGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLL 338



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 153/314 (48%), Gaps = 35/314 (11%)

Query: 141 GLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G++P+ +T   V+KAC +   L  GK+ H  ++K+GFE DV V  +L+HMY R G    A
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 198 RKLFDDMPVRDSGSWNAMIS-------------------------------GYCQSGNAV 226
             +FD M  R + +WNAMI+                               GY Q+G   
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           E+L++ ++MR  G+  D   + S+L  CA    +  G   H Y+V+ G   ++ V + L+
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MYAK G M  A +VFD+M +R+ VSWNSII    Q      A   F  M QAGI+P+ +
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           + V + S  +        R     + +    + DV     ++D+  + G ++ A     G
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304

Query: 407 LPVK-DVISWNTLI 419
           +PV+ DV  W  L+
Sbjct: 305 MPVEPDVSVWGALL 318



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 158/360 (43%), Gaps = 46/360 (12%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   K+ H  ++  G    V   T LV+ YA  G L  + H FD +S R+  TWN+
Sbjct: 22  SIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNA 81

Query: 116 MISVYVRCGRLSEAVDCFYQFT------------------------------LTSGLRPD 145
           MI+ + +   + +A+  FY+ +                                +G++ D
Sbjct: 82  MITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSD 141

Query: 146 FYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
            +    VL AC +L     G++ H  V++ GF  D+ V ++L+ MY + G    A ++FD
Sbjct: 142 RFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFD 201

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            MP R+  SWN++I+G  Q G   +A+ + ++M   G+  + I+   +L  C+ +  +  
Sbjct: 202 KMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNE 261

Query: 263 GL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAY 320
           G    +L    +G+  ++     +I++  + G +  A    + M +E DV  W +++ A 
Sbjct: 262 GRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGAC 321

Query: 321 EQSNDP-----ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
               +      I  H     +Q AGI       V L++I A      ++  V   +  RG
Sbjct: 322 RIHGNTELAKRIAEHLLGMEVQIAGI------YVLLSNIYAAAGQWDDAAKVRKLMKDRG 375


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/690 (36%), Positives = 390/690 (56%), Gaps = 23/690 (3%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           + P+L  C    +L   K +H  ++K G   D+FVA SL+++Y R G +  AR LFD+MP
Sbjct: 81  YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            ++  +W A+I+GY  +   V AL++  EM   G      T+  +L  C  S NI  G  
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA-YEQSN 324
           +H Y +K+G      + N+L  +Y K G +   +R F ++ +++V++W ++I+A  E  N
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDEN 260

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                   F  M +  + P+  TL S+ S+     D    + V GF  + G    ++ + 
Sbjct: 261 YTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGC-ATNLPVK 319

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-----------NGLASEAIE 433
           N+ + +Y + G    A  +FE +    VI+WN +I+G+AQ                +A++
Sbjct: 320 NSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALK 379

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F+ +   + + P+  T+ SIL   S + AL QG +IHA+ IK     DV V + LV+MY
Sbjct: 380 IFRDLVR-SAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMY 438

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I+ A   F ++P  + V W ++IS +  HG+   A+  F  M+  G +P+ ITFV
Sbjct: 439 NKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFV 498

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           SLL+ACS++GLV E  RYF MMQ E+ I+P + HYGCM+D+F R G L  A+ FI+    
Sbjct: 499 SLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGF 558

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P+ +IW +L+  CR HGNMEL   A+DRL E+  + V  YVL+ N+Y + G+W  V  V
Sbjct: 559 EPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARV 618

Query: 674 RSLAR--DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           R L++  D G+ +   W  I + +KV  F   +R+HP+  ++Y  L  L  K K++GY P
Sbjct: 619 RKLSKHEDLGILRDRSW--ITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEP 676

Query: 732 DKSFVLQDVEEDEKEHI--LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
            ++  L D EED K     L  HSERLA+A G++ +PP   ++I KN+ +C DCH+  KF
Sbjct: 677 YQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKF 736

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDY 819
            S +  REI+VRDS R H FKDG CSCGD+
Sbjct: 737 FSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 251/497 (50%), Gaps = 26/497 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LH  +V +G I  +F +T LVN Y   G+   +R+ FD +  +NV TW ++I+ 
Sbjct: 94  LGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITG 153

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           Y    +   A++ F +  L  G  P  YT   +L AC    N+  GK++H   +K G   
Sbjct: 154 YTLNSQPVLALEVFVEM-LKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAAS 212

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEM 235
              +  SL  +Y + G      + F  +P ++  +W  MIS   +  N  E  L++  +M
Sbjct: 213 ITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDM 272

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
               V  +  T+ S++ +C  S ++  G  +  +  K G   NL V N+ + +Y + G  
Sbjct: 273 LKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGET 332

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT------AHGF-----FTTMQQAGIQPD 344
             A+R+F++M +  V++WN++I+ + Q  D         + GF     F  + ++ ++PD
Sbjct: 333 EEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPD 392

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T  S+ S+ + +        +H   ++ G F+ DV++ +A+V+MY K G I  A   F
Sbjct: 393 LFTFSSILSVCSTMMALEQGEQIHAQTIKTG-FLSDVVVNSALVNMYNKCGCIEYATKAF 451

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P + +++W ++I+GY+Q+G   +AI++F+ M       PN+ T+VS+L A S+ G +
Sbjct: 452 VEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGA-KPNEITFVSLLSACSYAGLV 510

Query: 465 RQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            + ++ +  +++N    +  +    C++DM+ + GR+DDA +    + R    P  AI S
Sbjct: 511 EEAMR-YFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAF---IKRKGFEPNEAIWS 566

Query: 523 --CHGIHGQGDKALNFF 537
               G    G+  L F+
Sbjct: 567 SLVAGCRSHGNMELAFY 583



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 204/420 (48%), Gaps = 20/420 (4%)

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +A EA+ +L E    G S+       +L  C  + ++     +H ++VK G   ++FV+ 
Sbjct: 62  DAQEAMAMLKE----GQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVAT 117

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +L+N+Y + G  + A  +FD+M E++VV+W ++I  Y  ++ P+ A   F  M + G  P
Sbjct: 118 SLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYP 177

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              TL  + S     ++    + VHG+ ++ G       IGN++  +Y K G + S    
Sbjct: 178 SDYTLGGMLSACVASHNIDLGKQVHGYTIKYGA-ASITSIGNSLCRLYTKSGNLESGIRA 236

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASE-AIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           F+ +P K+VI+W T+I+  A++   +E  + +F  M +  E+ PN+ T  S++       
Sbjct: 237 FKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLK-GEVMPNEFTLTSVMSLCGTSL 295

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            +  G ++     K     ++ V    + +Y + G  ++AM LF ++  +S + WNA+IS
Sbjct: 296 DMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMIS 355

Query: 523 CHG---------IHG--QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
                       +H   +G +AL  FR ++   ++PD  TF S+L+ CS    + +G++ 
Sbjct: 356 GFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQ- 414

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    + G    +     +V+++ + G +  A      MP R   + W +++     HG
Sbjct: 415 IHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVT-WTSMISGYSQHG 473



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 20/202 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   C+    L   +++HA  + +G +  V  ++ LVN Y   G + ++   F  + 
Sbjct: 396 FSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMP 455

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKK 164
            R + TW SMIS Y + GR  +A+  F    L +G +P+  TF  +L AC    LV+   
Sbjct: 456 TRTLVTWTSMISGYSQHGRPHDAIQLFEDMIL-AGAKPNEITFVSLLSACSYAGLVEEAM 514

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFG-----LANVARKLFDDMPVRDSGSWNAMIS 217
            +  +++  +  +  +     ++ M+ R G      A + RK F+     +   W+++++
Sbjct: 515 RYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEP----NEAIWSSLVA 570

Query: 218 GYCQSGN---AVEALDILDEMR 236
           G    GN   A  A D L E++
Sbjct: 571 GCRSHGNMELAFYAADRLLELK 592


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 414/735 (56%), Gaps = 66/735 (8%)

Query: 133  FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             Y FTL++         PP L           +H   +K G    +  A  LL +Y +  
Sbjct: 296  LYHFTLSNS--------PPPLGT---------LHALYVKNGSLQTLNPANHLLTLYAKSN 338

Query: 193  LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
                A+KLFD++P R++ +W  +ISG+ ++G++    ++  EM+ +G   +  T++S+L 
Sbjct: 339  NMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLK 398

Query: 253  VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
             C+  +N+  G  +H +++++G++ ++ + N+++++Y K  +  +A R+F+ M E DVVS
Sbjct: 399  CCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVS 458

Query: 313  WNSIIAAYEQSNDPITAHGFFTT-------------------------------MQQAGI 341
            WN +I AY ++ D   +   F                                 M + G 
Sbjct: 459  WNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGT 518

Query: 342  QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
            +   +T      + + L+     R +HG +++ G F  D  I +++V+MY K G ++ A 
Sbjct: 519  EFSAVTFSIALILASSLSHVELGRQLHGMVLKFG-FDSDGFIRSSLVEMYCKCGRMDKAS 577

Query: 402  AVFEGLPV----------------KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
             +   +P+                  ++SW ++++GY  NG   + ++ F++M     + 
Sbjct: 578  IILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVR-ELVV 636

Query: 446  PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
             +  T  +I+ A ++ G L  G  +HA V K     D +V + L+DMY K G +DDA  +
Sbjct: 637  VDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMV 696

Query: 506  FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
            F Q    + V W ++IS + +HGQG  A+  F +ML++G+ P+ +TF+ +L ACSH+GL+
Sbjct: 697  FRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLI 756

Query: 566  SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
             EG RYF MM++ + I P ++H   MVDL+GRAGHL    NFI    +    S+W + L 
Sbjct: 757  EEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLS 816

Query: 626  ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
            +CR+H N+E+G   S+ L +V   + G YVL+SN+ A+  +W+    VRSL   RG+KK 
Sbjct: 817  SCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQ 876

Query: 686  PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
            PG S I++ +++  F  G+R+HP+ ++IY  L  L  ++K +GY  D   V+QDVEE++ 
Sbjct: 877  PGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQG 936

Query: 746  EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
            E +++ HSE+LA+ FGII++  ++PI+I KNLR+C DCHN+ K+ SQ+ +REIIVRD +R
Sbjct: 937  EVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHR 996

Query: 806  FHHFKDGICSCGDYW 820
            FHHFK G CSCGDYW
Sbjct: 997  FHHFKHGSCSCGDYW 1011



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/593 (25%), Positives = 270/593 (45%), Gaps = 69/593 (11%)

Query: 54  FQSCTKLHH--------VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
            QSC+  H         +  LHAL V +G ++T+  +  L+  YA   +++ ++  FD I
Sbjct: 291 LQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEI 350

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             RN  TW  +IS + R G  SE V   ++     G  P+ YT   VLK C    NL  G
Sbjct: 351 PQRNTQTWTILISGFARAGS-SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLG 409

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K +H  +L+ G + DV +  S+L +Y +  +   A +LF+ M   D  SWN MI  Y ++
Sbjct: 410 KGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRA 469

Query: 223 GNAVEALDILDEMRLE-------------------------------GVSMDPITVASIL 251
           G+  ++LD+   +  +                               G     +T +  L
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIAL 529

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA------------- 298
            + +   ++  G  +H  ++K G + + F+ ++L+ MY K G M  A             
Sbjct: 530 ILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLR 589

Query: 299 ---LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
               RV  +  +  +VSW S+++ Y  +         F  M +  +  D+ T+ ++ S  
Sbjct: 590 KGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A        R VH ++ + G  + D  +G++++DMY+K G ++ A  VF      +++ W
Sbjct: 650 ANAGILEFGRHVHAYVQKIGHRI-DAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMW 708

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            ++I+GYA +G    AI +F+ M     I PN+ T++ +L A SH G + +G + + R++
Sbjct: 709 TSMISGYALHGQGMHAIGLFEEMLN-QGIIPNEVTFLGVLNACSHAGLIEEGCR-YFRMM 766

Query: 476 KNCLCFDVFVATC--LVDMYGKCGRIDDAMSLFYQ--VPRSSSVPWNAIISCHGIHGQGD 531
           K+  C +  V  C  +VD+YG+ G +    +  ++  +   +SV W + +S   +H   +
Sbjct: 767 KDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSV-WKSFLSSCRLHKNVE 825

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
               +  +ML +    D   +V L   C+ +    E  R   +M +  G+K  
Sbjct: 826 MG-KWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQR-GVKKQ 876



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 156/332 (46%), Gaps = 30/332 (9%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL+  C    + +RL  L+        V S   ++  Y   GD+  S   F  + Y++V 
Sbjct: 433 DLYLKCKVFEYAERLFELM----NEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVV 488

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           +WN+++   ++CG    A++  Y   +  G      TF   L    +L     G+++H  
Sbjct: 489 SWNTIVDGLLQCGYERHALEQLYCM-VECGTEFSAVTFSIALILASSLSHVELGRQLHGM 547

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSG--------------SW 212
           VLK GF+ D F+ +SL+ MYC+ G  + A  +  D+P  V   G              SW
Sbjct: 548 VLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSW 607

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
            +M+SGY  +G   + L     M  E V +D  TV +I+  CA +  +  G  +H Y+ K
Sbjct: 608 GSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQK 667

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G   + +V ++LI+MY+K G +  A  VF Q  E ++V W S+I+ Y      + A G 
Sbjct: 668 IGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGL 727

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           F  M   GI P+ +T + +      LN C ++
Sbjct: 728 FEEMLNQGIIPNEVTFLGV------LNACSHA 753


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/686 (36%), Positives = 397/686 (57%), Gaps = 10/686 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++     G++  +   F  +  R+V++WN M+  Y + G L EA+D +Y+  L +G+RP
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM-LWAGMRP 195

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL+ C  + D   G+++H  VL+ GF  +V V  +L+ MY + G    ARK+F
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D M V D  SWNAMI+G+ ++      L++   M    V  + +T+ S+         + 
Sbjct: 256 DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
               +H + VK G   ++   N+LI MY   G M  A ++F +M  +D +SW ++I+ YE
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYE 375

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +  M+   + PD +T+ S  +  A L        +H     +G F+  V
Sbjct: 376 KNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG-FIRYV 434

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++ NA+++MYAK   I+ A  VF+ +  KDV+SW+++I G+  N  + EA+  F+ M   
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM--L 492

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN  T+++ L A +  GALR G +IHA V++  +  + +V   L+D+Y KCG+   
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A + F        V WN ++S    HG GD AL+ F QM++ G  PD +TFV+LL ACS 
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +G+V +G   FHMM E+F I P+LKHY CMVDL  R G L  A+N I  MP++PDA++WG
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL  CRIH ++ELG +A+  + E++  +V Y+VL+ ++Y + GKW  V  VR   R++G
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           L++  G S +EV      F T + +HP+ ++I   L  +  +MK+ G+ P +S   ++V 
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVS 792

Query: 742 EDEKEHILTSHSERLAIAFGIISSPP 767
           ED+   IL  HSERLA+AFG+I++ P
Sbjct: 793 EDD---ILCGHSERLAVAFGLINTTP 815



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 236/457 (51%), Gaps = 8/457 (1%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           ++L M  RFG    A ++F  MP RD  SWN M+ GY + G   EALD+   M   G+  
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRP 195

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T   +L  C    +   G  +H ++++ G    + V N L+ MYAK G +  A +VF
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M   D +SWN++IA + ++++       F TM +  +QP+L+T+ S+T     L++  
Sbjct: 256 DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +HGF ++RG F  DV   N+++ MY  LG +  A  +F  +  KD +SW  +I+GY
Sbjct: 316 FAKEMHGFAVKRG-FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+EV+ +ME  N ++P+  T  S L A + +G L  GIK+H           
Sbjct: 375 EKNGFPDKALEVYALMELHN-VSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V VA  L++MY K   ID A+ +F  +     V W+++I+    + +  +AL +FR ML 
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             V+P+ +TF++ L+AC+ +G +  G+   H      GI         ++DL+ + G   
Sbjct: 494 H-VKPNSVTFIAALSACAATGALRSGKE-IHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            A     ++    D   W  +L     HG   LG +A
Sbjct: 552 YAWAQF-SVHSEKDVVSWNIMLSGFVAHG---LGDIA 584



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 243/469 (51%), Gaps = 9/469 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HA ++  G    V     LV  YA  GD+  +R  FD ++  +  +WN+MI+ +   
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFEN 276

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
                 ++ F    L + ++P+  T   V  A   L +    K++H   +K GF  DV  
Sbjct: 277 HECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAF 335

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY   G    A K+F  M  +D+ SW AMISGY ++G   +AL++   M L  V
Sbjct: 336 CNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNV 395

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D +T+AS L  CA    +  G+ +H      G    + V+N L+ MYAK   +  A+ 
Sbjct: 396 SPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIE 455

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M E+DVVSW+S+IA +  ++    A  +F  M    ++P+ +T ++  S  A    
Sbjct: 456 VFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGA 514

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R+ + +H +++R G   E   + NA++D+Y K G  + A A F     KDV+SWN +++
Sbjct: 515 LRSGKEIHAYVLRCGIGSEG-YVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCL 479
           G+  +GL   A+ +F  M E  E +P++ T+V++L A S  G + QG ++ H    K  +
Sbjct: 574 GFVAHGLGDIALSLFNQMVEMGE-HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSI 632

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
             ++    C+VD+  + G++ +A +L  ++P +  +  W A+++   IH
Sbjct: 633 VPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 681



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 202/423 (47%), Gaps = 8/423 (1%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           +A +   C  G   +AL +L+         D     ++  +C     + +G+        
Sbjct: 68  SAALRALCSHGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADA 124

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
               F L + N +++M  +FG + HA RVF +M ERDV SWN ++  Y +      A   
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M  AG++PD+ T   +      + D R  R VH  ++R G F ++V + NA+V MYA
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFG-FGDEVDVLNALVTMYA 243

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G I +A  VF+G+ V D ISWN +I G+ +N      +E+F  M E NE+ PN  T  
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLE-NEVQPNLMTIT 302

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+  A   +  +    ++H   +K     DV     L+ MY   GR+ DA  +F ++   
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
            ++ W A+IS +  +G  DKAL  +  M    V PD +T  S L AC+  G +  G +  
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIK-L 421

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACRIHG 631
           H + +  G   ++     +++++ ++ H+  A    + M  + D   W +++ G C  H 
Sbjct: 422 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHR 480

Query: 632 NME 634
           + E
Sbjct: 481 SFE 483


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/652 (37%), Positives = 383/652 (58%), Gaps = 4/652 (0%)

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           +LG+  + F+   L+ +Y +    + A  +F  +  ++  SW  M++ + ++ +      
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
               M L+G++   + ++  L  C  +  I  G  I L I+  G+E    V   L+++Y 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G    A  VF +M  RDVV+W++++AAY ++  P  A G F  M   G+ P+ +TLVS
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
                A L D R+   +H  +  +G     V++G A+V++Y K G I +A   F  +  K
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQG-IQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEK 241

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           +V++W+ +   YA+N    +AI V   M+    + PN  T+VS+L A + + AL+QG +I
Sbjct: 242 NVVAWSAISAAYARNDRNRDAIRVLHRMD-LEGLAPNSTTFVSVLDACAAIAALKQGRRI 300

Query: 471 HAR--VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           H R  V+   L  DV+V T LV+MY KCG +  A ++F ++     V WN++I+ +  HG
Sbjct: 301 HERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHG 360

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           Q +KAL  F +M  EG++P  ITF S+L ACSH+G++ +G+++F     + GI P  +H+
Sbjct: 361 QTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHF 420

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
           GCMVDL GRAG +  + + + +MP  P    W A LGACR + NM+    A++ LF++D 
Sbjct: 421 GCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDP 480

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
                YVL+SN+YA  G+W  V  +R   +     K  G S IEV ++V  F +G+  HP
Sbjct: 481 RKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHP 540

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           +  +I+ EL+ LT  MK+ GYVPD   VL DV+++ KE ++  HSE+LA+AF ++++P  
Sbjct: 541 RIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEG 600

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           SPI++ KNLRVC DCH  +KFIS++  REI+VRD NRFH F++G CSCGDYW
Sbjct: 601 SPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 248/513 (48%), Gaps = 17/513 (3%)

Query: 74  GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF 133
           G I+  F    L++ Y        +   F  I  +NV++W  M++ +    R  +    F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAE-NRDFDRCWLF 63

Query: 134 YQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           ++  L  G+ P        L AC   R +  G+ I  ++L  G E +  V  +L+ +Y +
Sbjct: 64  FRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGK 123

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            G    A  +F  M  RD  +W+AM++ Y ++G+  EAL +  +M L+GV+ + +T+ S 
Sbjct: 124 LGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSG 183

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L  CA   ++ SG L+H  +   G++  + V   L+N+Y K G +  A   F Q++E++V
Sbjct: 184 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNV 243

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           V+W++I AAY +++    A      M   G+ P+  T VS+    A +   +  R +H  
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303

Query: 371 IMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           I   G  +E DV +  A+V+MY+K G +  A  +F+ +   D++ WN+LI   AQ+G   
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTE 363

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF-DVFVATC 488
           +A+E+F+ M     + P   T+ S+L A SH G L QG K     I +   F +     C
Sbjct: 364 KALELFERM-RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGC 422

Query: 489 LVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL----NFFRQMLDE 543
           +VD+ G+ G I D+  L   +P     V W A +     +   D A+    N F+  LD 
Sbjct: 423 MVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQ--LDP 480

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
             R  ++   ++    + +G  S+  R    MQ
Sbjct: 481 RKRAPYVLLSNMY---AKAGRWSDVARMRQAMQ 510



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 46  REIDFDDL----------FQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANL 92
           R++D D +            +C  L  ++    +H  +   G    V   T LVN Y   
Sbjct: 166 RQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC 225

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G +  +   F  I  +NV  W+++ + Y R  R  +A+   ++  L  GL P+  TF  V
Sbjct: 226 GRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDL-EGLAPNSTTFVSV 284

Query: 153 LKAC---RNLVDGKKIH--CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
           L AC     L  G++IH    VL  G E DV+V  +L++MY + G   +A  +FD +   
Sbjct: 285 LDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHL 344

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           D   WN++I+   Q G   +AL++ + MRLEG+    IT  S+L  C+ +  +  G
Sbjct: 345 DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 400


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/556 (39%), Positives = 352/556 (63%), Gaps = 3/556 (0%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  ++K     + F+ + L++MY K G    A R+FD+M  RD+VSWNS+++       
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 326 PITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                  F  M+ ++G QP+ +TL+S+ S  A +      +S+HG +++ G   +  ++ 
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV- 279

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N++++MY KLG +++A  +FE +PV+ ++SWN+++  +  NG A + +++F +M+    I
Sbjct: 280 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG-I 338

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
           NP+Q T V++L A +  G  RQ   IHA + +     D+ +AT L+++Y K GR++ +  
Sbjct: 339 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 398

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++    ++ W A+++ + +H  G +A+  F  M+ EGV  DH+TF  LL+ACSHSGL
Sbjct: 399 IFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 458

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG++YF +M E + ++P L HY CMVDL GR+G L  A+  I++MP+ P + +WGALL
Sbjct: 459 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 518

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACR++GN+ELG   +++L  +D  +   Y+++SNIY+  G W    +VR L ++R L +
Sbjct: 519 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTR 578

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S IE  NK+  F  G++ HP+ ++I+ +L  L  K+   G  P   FVL D++E+ 
Sbjct: 579 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEV 638

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K  ++  HSE+LAIAFG++ +    P+ I KNLR+CGDCH+  KF S + +R II+RDS 
Sbjct: 639 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 698

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF DG+CSC DYW
Sbjct: 699 RFHHFADGLCSCRDYW 714



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 224/431 (51%), Gaps = 12/431 (2%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           + +C ++     IH  V+K     D F+   L+ MY + G    A++LFD+MP RD  SW
Sbjct: 149 ISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSW 208

Query: 213 NAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           N+++SG    G     L+    MR E G   + +T+ S++  CA    +  G  +H  +V
Sbjct: 209 NSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVV 268

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K G+     V N+LINMY K G +  A ++F++M  R +VSWNS++  +  +        
Sbjct: 269 KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMD 328

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F  M++AGI PD  T+V+L          R + S+H +I R G F  D+II  A++++Y
Sbjct: 329 LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG-FNADIIIATALLNLY 387

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AKLG +N++  +FE +  +D I+W  ++ GYA +    EAI++F +M +   +  +  T+
Sbjct: 388 AKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVK-EGVEVDHVTF 446

Query: 452 VSILPAYSHVGALRQGIK---IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
             +L A SH G + +G K   I + V +     D +  +C+VD+ G+ GR++DA  L   
Sbjct: 447 THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIKS 504

Query: 509 VP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSGLVS 566
           +P   SS  W A++    ++G  +       Q+L   + P DH  ++ L    S +GL  
Sbjct: 505 MPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGLWR 562

Query: 567 EGQRYFHMMQE 577
              +   +M+E
Sbjct: 563 XASKVRXLMKE 573



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 206/440 (46%), Gaps = 19/440 (4%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
             SCT + +   +HA ++ S      F   +LV+ Y  LG    ++  FD +  R++ +W
Sbjct: 149 ISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSW 208

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL 170
           NS++S     G L   ++ F +    SG +P+  T   V+ AC     L +GK +H  V+
Sbjct: 209 NSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVV 268

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           KLG      V  SL++MY + G  + A +LF++MPVR   SWN+M+  +  +G A + +D
Sbjct: 269 KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMD 328

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + + M+  G++ D  T+ ++L  C  +        IH YI + G   ++ ++  L+N+YA
Sbjct: 329 LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYA 388

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  +  +F+++ +RD ++W +++A Y        A   F  M + G++ D +T   
Sbjct: 389 KLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 448

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPV 409
           L S  +        +  +  IM   + +E  +   + +VD+  + G +  A  + + +P+
Sbjct: 449 LLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPM 507

Query: 410 KDVIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +     W  L+     Y    L  E  E    ++  +  N     Y+ +   YS  G  R
Sbjct: 508 EPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN-----YIMLSNIYSAAGLWR 562

Query: 466 QGIKIHA-----RVIKNCLC 480
              K+       R+ +N  C
Sbjct: 563 XASKVRXLMKERRLTRNPGC 582


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/655 (37%), Positives = 383/655 (58%), Gaps = 6/655 (0%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F  + L+  YA  G +  +R  FD +  ++   WN M++ +V+CG  + AV  F      
Sbjct: 8   FVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR-N 66

Query: 140 SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
              +P+  TF  VL  C +      G ++H  V+  GF +D  VA +L+ MY +FG  + 
Sbjct: 67  CQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSD 126

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A KLF+ MP  +  +WN MI+G+ Q+G   EA  +  EM   GVS D IT AS LP    
Sbjct: 127 ALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTE 186

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S ++  G  IH YI++HG+  ++F+ + LI++Y K   +  A ++F Q    D+V   +I
Sbjct: 187 SASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAI 246

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+ Y  +     A   F  + +  + P+ +TL S+    A L      + +H  I++ G 
Sbjct: 247 ISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG- 305

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
             E   +G+A++DMYAK G ++ A  +F  +P KD + WN +IT  +QNG   EAI++F+
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     ++ +  +  + L A +++ AL  G  IH+ +IK     +VF  + L+DMYGKC
Sbjct: 366 QMGR-EGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC 424

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G +  A  +F  +   + V WN+II+ +G HG  + +L  F +ML++G++PDH+TF+++L
Sbjct: 425 GNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTIL 484

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +AC H+G V +G +YF  M EE+GI   ++HY C+VDLFGRAG L  A   I+NMP  PD
Sbjct: 485 SACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPD 544

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
             +WG LLGACR+HGN+EL  VAS  L ++D EN G YVL+SN++A+ G+W  V ++RSL
Sbjct: 545 DGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSL 604

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            + RG++K PG+S IEVN    +F   + +HP+  +IY  L NL  +++  GY P
Sbjct: 605 MKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCP 659



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 292/545 (53%), Gaps = 12/545 (2%)

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           +GF  D FV +SL+ +Y   G    AR+LFD MP +D   WN M++G+ + G    A+ +
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
            ++MR      + IT AS+L +CA       G  +H  ++  G  F+  V+N L+ MY+K
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           FG +  AL++F+ M + +VV+WN +IA + Q+     A   F+ M  AG+ PD +T  S 
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
              V +    +  + +HG+I+R G  + DV + +A++D+Y K   +  AC +F+     D
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIAL-DVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           ++    +I+GY  NGL ++A+E+F+ + E  +++PN  T  S+LPA + +  L  G ++H
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLE-EKMSPNAVTLASVLPACAGLATLNLGKELH 298

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           A ++K+ L     V + ++DMY KCGR+D A  +F ++P   +V WNAII+    +G+  
Sbjct: 299 ANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQ 358

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A++ FRQM  EG+  D ++  + L+AC++   +  G +  H    +      +     +
Sbjct: 359 EAIDLFRQMGREGLSYDCVSISAALSACANLPALHHG-KAIHSFMIKGAFDSEVFAESAL 417

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSE 649
           +D++G+ G+L +A      M  + + S W +++ A   HG++E+      ++ E  +  +
Sbjct: 418 IDMYGKCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEVSLALFHKMLEDGIQPD 476

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL-KKTPGWSSIEVNNKVDIFYTGNRTHP 708
           +V +  ++S         +G+   R +  + G+  +   ++ I     VD+F    R + 
Sbjct: 477 HVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACI-----VDLFGRAGRLNE 531

Query: 709 KYEKI 713
            +E I
Sbjct: 532 AFETI 536



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 255/488 (52%), Gaps = 18/488 (3%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH L++  G       +  LV  Y+  G LS +   F+ +   NV TWN MI+ +V+ G
Sbjct: 94  QLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNG 153

Query: 125 RLSEAVDCFYQFTLTSGLRPD---FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVA 181
            + EA   F +  +++G+ PD   F +F P +    +L  GK+IH  +L+ G   DVF+ 
Sbjct: 154 FMDEASLLFSEM-ISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLK 212

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
           ++L+ +Y +     +A K+F      D     A+ISGY  +G   +AL+I   +  E +S
Sbjct: 213 SALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMS 272

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            + +T+AS+LP CA    +  G  +H  I+KHGL+    V + +++MYAK G +  A ++
Sbjct: 273 PNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQI 332

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F +M E+D V WN+II    Q+  P  A   F  M + G+  D +++ +  S  A L   
Sbjct: 333 FRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPAL 392

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            + +++H F M +G F  +V   +A++DMY K G ++ A  VF+ +  K+ +SWN++I  
Sbjct: 393 HHGKAIHSF-MIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAA 451

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           Y  +G    ++ +F  M E + I P+  T+++IL A  H G + +GI+        C+  
Sbjct: 452 YGSHGHLEVSLALFHKMLE-DGIQPDHVTFLTILSACGHAGQVDKGIQYF-----RCMTE 505

Query: 482 DVFVA------TCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHGQGDKAL 534
           +  +        C+VD++G+ GR+++A      +P S     W  ++    +HG  + A 
Sbjct: 506 EYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAE 565

Query: 535 NFFRQMLD 542
              R +LD
Sbjct: 566 VASRCLLD 573



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 6/261 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHA ++  G  +     + +++ YA  G L  +   F  +  ++   WN++I+   + 
Sbjct: 295 KELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQN 354

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFV 180
           G+  EA+D F Q     GL  D  +    L AC NL     GK IH  ++K  F+ +VF 
Sbjct: 355 GKPQEAIDLFRQMG-REGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFA 413

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+ MY + G  +VAR +FD M  ++  SWN++I+ Y   G+   +L +  +M  +G+
Sbjct: 414 ESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGI 473

Query: 241 SMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             D +T  +IL  C  +  +  G+        ++G+   +     +++++ + G +  A 
Sbjct: 474 QPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAF 533

Query: 300 RVFDQM-MERDVVSWNSIIAA 319
                M    D   W +++ A
Sbjct: 534 ETIKNMPFSPDDGVWGTLLGA 554



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 10/190 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           LHH K +H+ ++       VF+ + L++ Y   G+LS +R  FD +  +N  +WNS+I+ 
Sbjct: 392 LHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAA 451

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVLKLGFE 175
           Y   G L  ++  F++  L  G++PD  TF  +L AC +     K      C   + G  
Sbjct: 452 YGSHGHLEVSLALFHKM-LEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIP 510

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDE 234
             +   A ++ ++ R G  N A +   +MP   D G W  ++ G C+    VE  ++   
Sbjct: 511 ARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLL-GACRVHGNVELAEVASR 569

Query: 235 MRLEGVSMDP 244
             L+   +DP
Sbjct: 570 CLLD---LDP 576


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/658 (37%), Positives = 370/658 (56%), Gaps = 80/658 (12%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           +N  I  +C+ GN   A++++++     + +   T  S+L +CA   +I  G  IH  I 
Sbjct: 71  YNIEICRFCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQ 128

Query: 272 KHGLEFN-------------------------------LFVSNNLINMYAKFGMMRHAL- 299
            + +E +                               +F+ N L+N YAK G  R +L 
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLS 188

Query: 300 -----------------RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
                            ++FD++ +RDV+SWNS+I+ Y  +         F  M   GI 
Sbjct: 189 LFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGIN 248

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            DL T+VS+                            ++ + N ++DMY+K G +NSA  
Sbjct: 249 TDLATMVSV----------------------------ELTLNNCLLDMYSKSGNLNSAIQ 280

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VFE +  + V+SW ++I GYA+ GL+  ++ +F  ME+  ++ PN  T   ILPA + + 
Sbjct: 281 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEK-EDLFPNSITMACILPACASLA 339

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL +G +IH  +++N    D  VA  LVDMY KCG +  A  LF  +P    V W  +I+
Sbjct: 340 ALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIA 399

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+HG G +A+  F +M + G+ PD ++F+S+L ACSHSGL+ EG  +F+MM+    I+
Sbjct: 400 GYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIE 459

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+VDL  RAG+L  A+ FI+ MP+ PDA+IWGALL  CRI+ +++L    ++ 
Sbjct: 460 PKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEH 519

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           +FE++ EN GYYVL++NIYA   KWE V ++R     RGL+K PG S IE+  KV IF T
Sbjct: 520 VFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVT 579

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+ +HP   KI   L+    +MK  G+ P   + L   ++ EKE  L  HSE++A+AFGI
Sbjct: 580 GDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGI 639

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S PP   +++ KNLRVCGDCH   KF+S++ +R+II+RDSNRFHHFKDG CSC  +W
Sbjct: 640 LSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 256/568 (45%), Gaps = 57/568 (10%)

Query: 61  HHVKRLHALLVVSGKI------KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           H + R ++L   +G I      KT   S+ L +  A +G       T D      +  +N
Sbjct: 17  HQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDC----KITDYN 72

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF--YTFPPVLKAC---RNLVDGKKIHCSV 169
             I  +   G L  A++   Q       +PD    T+  VL+ C   +++ DG++IH  +
Sbjct: 73  IEICRFCELGNLRRAMELINQSP-----KPDLELRTYCSVLQLCADLKSIQDGRRIHSII 127

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
                E D  + + L+ MY   G     R++FD +       WN +++GY + GN  E+L
Sbjct: 128 QSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESL 187

Query: 230 DILDEMRLEGV--------------SMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
            +   MR  G+                D I+  S++     +     GL +   ++  G+
Sbjct: 188 SLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI 247

Query: 276 EFN--------LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
             +        L ++N L++MY+K G +  A++VF+ M ER VVSW S+IA Y +     
Sbjct: 248 NTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSD 307

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            +   F  M++  + P+ +T+  +    A L      + +HG I+R G F  D  + NA+
Sbjct: 308 MSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNG-FSLDRHVANAL 366

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           VDMY K G +  A  +F+ +P KD++SW  +I GY  +G  SEAI  F  M     I P+
Sbjct: 367 VDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSG-IEPD 425

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSL 505
           + +++SIL A SH G L +G      +  NC C +       C+VD+  + G +  A   
Sbjct: 426 EVSFISILYACSHSGLLDEGWGFFNMMRNNC-CIEPKSEHYACIVDLLARAGNLSKAYKF 484

Query: 506 FYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
              +P    +  W A++    I+     A      + +  + P++  +  LL     + +
Sbjct: 485 IKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE--LEPENTGYYVLL-----ANI 537

Query: 565 VSEGQRYFHM--MQEEFGIKPHLKHYGC 590
            +E +++  +  ++E  G +   K+ GC
Sbjct: 538 YAEAEKWEEVKKLRERIGRRGLRKNPGC 565



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 39/200 (19%)

Query: 47  EIDFDDLFQ----------SCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLG 93
           E++ +DLF           +C  L  ++R   +H  ++ +G       +  LV+ Y   G
Sbjct: 315 EMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCG 374

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
            L  +R  FD I  +++ +W  MI+ Y   G  SEA+  F +    SG+ PD  +F  +L
Sbjct: 375 ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR-NSGIEPDEVSFISIL 433

Query: 154 KACRNLVDGKKIHCSVLKLGFEWDVFVA--------------ASLLHMYCRFGLANVARK 199
            AC         H  +L  G  W  F                A ++ +  R G  + A K
Sbjct: 434 YACS--------HSGLLDEG--WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 483

Query: 200 LFDDMPVR-DSGSWNAMISG 218
               MP+  D+  W A++ G
Sbjct: 484 FIKMMPIEPDATIWGALLCG 503


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 217/556 (39%), Positives = 353/556 (63%), Gaps = 3/556 (0%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  ++K     + F+ + L++MY K G    A R+FD+M  +D+VSWNS+++       
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 326 PITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                  F  M+ ++G QP+ +TL+S+ S  A +      +S+HG +++ G   +  ++ 
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV- 202

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N++++MY KLG +++A  +FE +PV+ ++SWN+++  +  NG A + +++F +M+    I
Sbjct: 203 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG-I 261

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
           NP+Q T V++L A +  G  RQ   IHA + +     D+ +AT L+++Y K GR++ +  
Sbjct: 262 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 321

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++     + W A+++ + +H  G +A+  F  M+ EGV  DH+TF  LL+ACSHSGL
Sbjct: 322 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 381

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG++YF +M E + ++P L HY CMVDL GR+G L  A+  I++MP+ P + +WGALL
Sbjct: 382 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACR++GN+ELG   +++L  +D  +   Y+++SNIY+  G W    +VR+L ++R L +
Sbjct: 442 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 501

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S IE  NK+  F  G++ HP+ ++I+ +L  L  K++  G  P   FVL D++E+ 
Sbjct: 502 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 561

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K  ++  HSE+LAIAFG++ +    P+ I KNLR+CGDCH+  KF S + +R II+RDS 
Sbjct: 562 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 621

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF DG+CSC DYW
Sbjct: 622 RFHHFADGLCSCRDYW 637



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 230/448 (51%), Gaps = 18/448 (4%)

Query: 142 LRPDFYTFPPV------LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
           L P F  +  V      + +C ++     IH  V+K     D F+   L+ MY + G   
Sbjct: 55  LSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDE 114

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVC 254
            A++LFD+MP +D  SWN+++SG    G     L+    MR E G   + +T+ S++  C
Sbjct: 115 DAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 174

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           A    +  G  +H  +VK G+     V N+LINMY K G +  A ++F++M  R +VSWN
Sbjct: 175 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWN 234

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           S++  +  +         F  M++AGI PD  T+V+L          R + S+H +I R 
Sbjct: 235 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 294

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G F  D+II  A++++YAKLG +N++  +FE +  +D I+W  ++ GYA +    EAI++
Sbjct: 295 G-FNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 353

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK---IHARVIKNCLCFDVFVATCLVD 491
           F +M +   +  +  T+  +L A SH G + +G K   I + V +     D +  +C+VD
Sbjct: 354 FDLMVK-EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVD 410

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP-DH 549
           + G+ GR++DA  L   +P   SS  W A++    ++G  +       Q+L   + P DH
Sbjct: 411 LLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDH 468

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQE 577
             ++ L    S +GL  +  +   +M+E
Sbjct: 469 RNYIMLSNIYSAAGLWRDASKVRALMKE 496



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 208/438 (47%), Gaps = 19/438 (4%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           SCT + +   +HA ++ S      F   +LV+ Y  LG    ++  FD +  +++ +WNS
Sbjct: 74  SCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNS 133

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           ++S     G L   ++ F +    SG +P+  T   V+ AC +   L +GK +H  V+KL
Sbjct: 134 LMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKL 193

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G      V  SL++MY + G  + A +LF++MPVR   SWN+M+  +  +G A + +D+ 
Sbjct: 194 GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLF 253

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           + M+  G++ D  T+ ++L  C  +        IH YI + G   ++ ++  L+N+YAK 
Sbjct: 254 NLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL 313

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  +  +F+++ +RD ++W +++A Y        A   F  M + G++ D +T   L 
Sbjct: 314 GRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLL 373

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKD 411
           S  +        +  +  IM   + +E  +   + +VD+  + G +  A  + + +P++ 
Sbjct: 374 SACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEP 432

Query: 412 VIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
               W  L+     Y    L  E  E    ++  +  N     Y+ +   YS  G  R  
Sbjct: 433 SSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN-----YIMLSNIYSAAGLWRDA 487

Query: 468 IKIHA-----RVIKNCLC 480
            K+ A     R+ +N  C
Sbjct: 488 SKVRALMKERRLTRNPGC 505


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/739 (36%), Positives = 406/739 (54%), Gaps = 78/739 (10%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL 172
           ++ M+  Y R G  ++ V  F + T +  LRP  + +  ++K       G   H  VLKL
Sbjct: 68  YSCMLKYYSRMGAHNQVVSLF-KCTHSLNLRPQPFVYIYLIKLAGK--SGNMFHAYVLKL 124

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G   D F+  ++L MY + G  ++AR LF+ M  R    WN+MISG  +SGN  EA    
Sbjct: 125 GHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEA---- 180

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
                       + + +++P  AR                     N+    +++  YAK 
Sbjct: 181 ------------VVLFNMMP--AR---------------------NIITWTSMVTGYAKM 205

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A R FD+M ER VVSWN++ +AY Q   P  A   F  M + GI PD  T V   
Sbjct: 206 GDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTI 265

Query: 353 SIVAQLNDCRNSRSVHGFI--------------------------MRRGWFME-----DV 381
           S  + + D   + S+   I                          + R  F E     + 
Sbjct: 266 SSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNA 325

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +  N ++  Y ++G ++ A  +F+ +P +DV+SWN++I GYAQNG ++ +IE+F+ M  C
Sbjct: 326 VTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISC 385

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            +I P++ T  S+L A  H+GAL+    +   V +  +   +     L+ MY KCG + D
Sbjct: 386 MDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVAD 445

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F  +     V +N +IS    +G G +A+     M +EG+ PDH+T++ +LTACSH
Sbjct: 446 AHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSH 505

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +GL++EG+  F  +Q      P + HY CMVDL GRAG L  A   IQ+MP++P A ++G
Sbjct: 506 AGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYG 560

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           +LL A RIH  + LG +A+ +LFE++ +N+G YVL+SNIYA+ G+WE V  VR + +  G
Sbjct: 561 SLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGG 620

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           LKK+ G S +E   +V  F  G+R+H + + IY  L  L  KMK +G+V DKS  L+DVE
Sbjct: 621 LKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVE 680

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E+EKE +L +HSE+LAI F ++ S   + I++ KNLR+C DCH   K IS++  REI+VR
Sbjct: 681 EEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVR 740

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D+NRFH F +G+CSC DYW
Sbjct: 741 DNNRFHCFSEGMCSCHDYW 759



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 219/483 (45%), Gaps = 86/483 (17%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
            HA ++  G I   F    +++ YA  G +  +R+ F+ ++ R +  WNSMIS   + G 
Sbjct: 117 FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGN 176

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
            +EAV  F                        N++  + I          W   V     
Sbjct: 177 ETEAVVLF------------------------NMMPARNI--------ITWTSMVTG--- 201

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
             Y + G    AR+ FD+MP R   SWNAM S Y Q     EAL++  +M  EG++ D  
Sbjct: 202 --YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDT 259

Query: 246 TVASILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           T    +  C+   D  L+  ++ +   KH +  N FV   L++M+AKFG +  A  +FD+
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKH-IVLNSFVKTALLDMHAKFGNLEIARNIFDE 318

Query: 305 --------------------------------MMERDVVSWNSIIAAYEQSNDPITAHGF 332
                                           M +RDVVSWNS+IA Y Q+ +   +   
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378

Query: 333 FTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG----NAV 387
           F  M     IQPD +T+ S+ S    +   + S  V   +  +     ++ +G    N++
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK-----NIKLGISGFNSL 433

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           + MY+K G +  A  +F+ +  +DV+S+NTLI+G+A NG   EAI++   MEE   I P+
Sbjct: 434 IFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEE-EGIEPD 492

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             TY+ +L A SH G L +G      V K+     V    C+VD+ G+ G +D+A  L  
Sbjct: 493 HVTYIGVLTACSHAGLLNEG----KNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQ 548

Query: 508 QVP 510
            +P
Sbjct: 549 SMP 551



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 52/375 (13%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + + T +V  YA +GDL  +R  FD +  R+V +WN+M S Y +     EA++ F+Q 
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDV----FVAASLLHM----- 187
            L  G+ PD  T+   + +C ++ D   +  S+L++  +  +    FV  +LL M     
Sbjct: 250 -LEEGITPDDTTWVVTISSCSSIGD-PTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307

Query: 188 ---------------------------YCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                                      Y R G  ++AR+LFD+MP RD  SWN+MI+GY 
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367

Query: 221 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           Q+G +  ++++  EM     +  D +T+AS+L  C     +     +   + +  ++  +
Sbjct: 368 QNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGI 427

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
              N+LI MY+K G +  A R+F  M  RDVVS+N++I+ +  +     A     TM++ 
Sbjct: 428 SGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEE 487

Query: 340 GIQPDLLTLVSLTSIVAQ---LNDCRNS-RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           GI+PD +T + + +  +    LN+ +N  +S+    +     M         VD+  + G
Sbjct: 488 GIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYACM---------VDLLGRAG 538

Query: 396 IINSACAVFEGLPVK 410
            ++ A  + + +P+K
Sbjct: 539 ELDEAKMLIQSMPMK 553



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 87/225 (38%), Gaps = 42/225 (18%)

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKI------------------------------HARV 474
           +P+   Y  +L  YS +GA  Q + +                              HA V
Sbjct: 62  SPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYV 121

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           +K     D F+   ++DMY K G++D A +LF Q+   +   WN++IS     G   +A+
Sbjct: 122 LKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAV 181

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F  M    +    IT+ S++T  +  G +   +RYF  M E   +      +  M   
Sbjct: 182 VLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPERSVVS-----WNAMQSA 232

Query: 595 FGRAGHLGMAHNFIQNM---PVRPDASIWGALLGACRIHGNMELG 636
           + +      A N    M    + PD + W   + +C   G+  L 
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLA 277


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/667 (36%), Positives = 385/667 (57%), Gaps = 5/667 (0%)

Query: 157 RNLVDGKKIHCS--VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
           +NL  GK IH    V     E  +    SL++ Y +    ++A  LFD MP R+  SW+A
Sbjct: 43  KNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSA 102

Query: 215 MISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           +++GY  +G +++ + +L +M  EG VS +   +A  +  C     +  G   H  ++K 
Sbjct: 103 LMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKT 162

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G  F+ +V N L++MY+K  +++ A+ V++++   D+V++NSI+++  ++          
Sbjct: 163 GFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVL 222

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
            +M    ++ D +T V+  S+ A L D R    VHG ++       D  + +A+++MY K
Sbjct: 223 RSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSD-VECDAYVSSAIINMYGK 281

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G    A  VF+GL  ++V+ W  ++    QNG   EA+ +F  ME+ N +  N+ TY  
Sbjct: 282 CGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQEN-VKSNEFTYAV 340

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +L A + + A R G  +H    K+     V V   L++MY K G I+ A  +F  +    
Sbjct: 341 LLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRD 400

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            + WNA+I     HG G KAL  F+ ML     P+++TF  +L+AC H GLV EG  Y H
Sbjct: 401 IITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLH 460

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            + ++FG++P L+HY C+V L  + G L  A NF++  PV+ D   W  LL AC +H N 
Sbjct: 461 HLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNY 520

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
            LG   ++ + E+D  +VG Y L+SNIYA   +W+GV +VR L RD+ +KK PG S IE+
Sbjct: 521 GLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEI 580

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            N   IF + +  HP Y + Y +++ L A +K LGY PD   VL DVE+++KE+ L+ HS
Sbjct: 581 GNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHS 640

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LAIA+G++  P ++ I + KNLR+C DCH+  + IS++T R I+VRD+NRFHHF+DG 
Sbjct: 641 EKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGR 700

Query: 814 CSCGDYW 820
           CSC DYW
Sbjct: 701 CSCLDYW 707



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 255/490 (52%), Gaps = 18/490 (3%)

Query: 64  KRLHALLVVSGKI--KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           K +H+ L+V+ +    ++     L+NFYA +  +S + + FD +  RNV +W+++++ Y+
Sbjct: 49  KTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYL 108

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLV-DGKKIHCSVLKLGFEWDV 178
             G   + +           + P+ Y     + +C  R  V +G++ H  +LK GF +  
Sbjct: 109 LNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHN 168

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           +V  +L+ MY +  +   A  +++++PV D  ++N+++S   ++G   E L++L  M  E
Sbjct: 169 YVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSE 228

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V  D +T  +   +CA   ++  GL +H  ++   +E + +VS+ +INMY K G    A
Sbjct: 229 SVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMA 288

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             VFD +  R+VV W +++A+  Q+     A   F+ M+Q  ++ +  T   L +  A L
Sbjct: 289 RGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGL 348

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +  RN   +HG   + G F   V++GNA+++MYAK G I +A  VF  +  +D+I+WN +
Sbjct: 349 SARRNGSLLHGHSEKSG-FKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAM 407

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G++ +GL  +A+ VFQ M    E +PN  T+  +L A  H+G +++G      ++K  
Sbjct: 408 ICGFSHHGLGKKALLVFQDMLAAEE-HPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQ- 465

Query: 479 LCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH---GQG 530
             F V       TC+V +  K G++++A +     P +   V W  +++   +H   G G
Sbjct: 466 --FGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLG 523

Query: 531 DKALNFFRQM 540
                F  +M
Sbjct: 524 RWVAEFVLEM 533


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/625 (38%), Positives = 376/625 (60%), Gaps = 2/625 (0%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCA 255
           A  +F    V D  +WN+M+  +  S     AL    EM     ++ D  T  S+L  CA
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
                  G ++H  +VK+ L  +L++   L+NMYA  G ++ A  +F++M  R+ V W S
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I+ Y +++ P  A   +  M++ G  PD +T+ +L S  A+L D      +H  I R  
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI-REM 209

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
                 ++G+A+V+MYAK G + +A  VF+ L  KDV +W+ LI GY +N  ++EA+++F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           + +   + + PN+ T ++++ A + +G L  G  +H  + +      V +   L+DM+ K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG ID A  +F  +     + WN++++   +HG G +AL  F  M    ++PD ITF+ +
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGV 389

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           LTACSH+GLV EG++ F+ ++  +G++   +HYGCMVDL  RAG L  A  FI+ MP++P
Sbjct: 390 LTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQP 449

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
           D +IWG++LGACR++ N+ELG  A+  L E++  N G Y+L+SNIYA    W  V +VR 
Sbjct: 450 DGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRE 509

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
           L  ++G++KTPG SS+ ++N    F  G+ +HP+  +I   LR +  K+K +GYV D S 
Sbjct: 510 LMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSE 569

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           VL ++++++KE  ++ HSE+LA+ +G++ S     I I KNLRVC DCH   K +S+I +
Sbjct: 570 VLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQ 629

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           R+I +RD NRFHHFKDG CSC DYW
Sbjct: 630 RQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 255/465 (54%), Gaps = 20/465 (4%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLS--FSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           +VV+G I    S  KL+    ++G L   ++   F H    +V TWNSM+  +V      
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASL 184
            A+  + +    S   PD +TFP +LK C  L++   GK +H  V+K     D+++  +L
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           L+MY   G    AR LF+ M  R+   W +MISGY ++    EAL +  +M  +G S D 
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +T+A+++  CA   ++  G+ +H +I +  ++    + + L+NMYAK G ++ A +VFDQ
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRN 363
           + ++DV +W+++I  Y ++N    A   F  +   + ++P+ +T++++ S  AQL D   
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300

Query: 364 SRSVHGFIMR--RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            R VH +I R  +G     V + N+++DM++K G I++A  +F+ +  KD+ISWN+++ G
Sbjct: 301 GRWVHDYITRTQKG---HSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            A +GL  EA+  F +M+   ++ P++ T++ +L A SH G +++G K+   +      +
Sbjct: 358 LALHGLGREALAQFHLMQT-TDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA---LY 413

Query: 482 DVFVAT----CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
            V + +    C+VD+  + G + +A      +P +     W +++
Sbjct: 414 GVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 212/449 (47%), Gaps = 36/449 (8%)

Query: 33  SLQISPDCLE---NESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLV 86
           +LQ   + LE   N      F  L + C  L   K    LH  +V       ++  T L+
Sbjct: 62  ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121

Query: 87  NFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF 146
           N YA  GDL  +R  F+ + +RN   W SMIS Y++    +EA+   Y+     G  PD 
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEAL-LLYKKMEEDGFSPDE 180

Query: 147 YTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
            T   ++ AC  L D   G K+H  + ++  +    + ++L++MY + G    AR++FD 
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNIL 261
           +  +D  +W+A+I GY ++  + EAL +  E+   G +M P  +T+ +++  CA+  ++ 
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVA-GGSNMRPNEVTILAVISACAQLGDLE 299

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           +G  +H YI +     ++ ++N+LI+M++K G +  A R+FD M  +D++SWNS++    
Sbjct: 300 TGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLA 359

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR-------SVHGFIMRR 374
                  A   F  MQ   +QPD +T + + +  +     +  +       +++G  ++ 
Sbjct: 360 LHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS 419

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASE 430
             +         +VD+  + G++  A      +P++ D   W +++     Y    L  E
Sbjct: 420 EHY-------GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEE 472

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A      +E  N+     G Y+ +   Y+
Sbjct: 473 AARCLLELEPTND-----GVYILLSNIYA 496


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 277/815 (33%), Positives = 430/815 (52%), Gaps = 20/815 (2%)

Query: 20  LQAHRPLFSAAANSLQISPDCLENESRE-IDFDDLFQSCTK---LHHVKRLHALLVVSGK 75
           +++   L S + +S Q+ P        E +D+  L QS TK   L+H K +H+ ++ +  
Sbjct: 31  IESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSF 90

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
              +F    L+N Y   GD   +   FD +S  N+ T+NS+IS YV+   L + +  F +
Sbjct: 91  RPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDK 150

Query: 136 FTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                GL+ D YT    L AC    NL  GK IH  +L  G    V +  SL+ MY + G
Sbjct: 151 -ARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG 209

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + AR LFD     D  SWN++I+GY Q+G   E L IL +M   G++ +  T+ S L 
Sbjct: 210 QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALK 269

Query: 253 VCARSDN--ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
            C+ + N   + G ++H + +K GL  ++ V   L++MYAK G +  A+++FDQM++++V
Sbjct: 270 ACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 329

Query: 311 VSWNSIIAAYEQSND-----PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           V +N+++A   Q           A   F  M+  GI+P + T  SL      + D + ++
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAK 389

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VH  + + G  + D  IG+ ++D+Y+ LG +  A   F  +    ++    +I GY QN
Sbjct: 390 QVHALMCKNG-LLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQN 448

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G    A+ +F  +    E  P++    +I+ + +++G LR G +I     K  +      
Sbjct: 449 GEFESALSLFYELLTYEE-KPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIF 507

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
               + MY K G +  A   F Q+     V W+ +I  +  HG   +AL FF  M   G+
Sbjct: 508 QNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGI 567

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            P+H  F+ +L ACSH GLV EG RYF  M++++ +K H+KH  C+VDL GRAG L  A 
Sbjct: 568 EPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAE 627

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
           + I  +    +  +W ALL ACRIH +       + ++ E++      YVL+ NIY + G
Sbjct: 628 SLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAG 687

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
                 +VR+L  +R +KK PG S I++ +KV  F +G+R+H    +IY +L  + A  K
Sbjct: 688 NKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTK 747

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
            L    D   +L    E E    +  HSE+LA+AFG++     +P+++ KNLR+C DCH 
Sbjct: 748 RLDSAKD---ILGYKIEHEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHM 804

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             K  S + +RE+IVRDS RFHHFKDG CSCGDYW
Sbjct: 805 TMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/739 (36%), Positives = 404/739 (54%), Gaps = 78/739 (10%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL 172
           ++ M+  Y R G  ++ V  F + T +  LRP  + +  ++K       G   H  VLKL
Sbjct: 68  YSCMLKYYSRMGAHNQVVSLF-KCTHSLNLRPQPFVYIYLIKLAGK--SGNLFHAYVLKL 124

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G   D F+  ++L MY + G  ++AR LF+ M  R    WN+MISG  +SGN  EA+ + 
Sbjct: 125 GHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLF 184

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           + M                   AR                     N+    +++  YAK 
Sbjct: 185 NMMP------------------AR---------------------NIITWTSMVTGYAKM 205

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A R FD+M ER VVSWN++ +AY Q   P  A   F  M + GI PD  T V   
Sbjct: 206 GDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTI 265

Query: 353 SIVAQLNDCRNSRSVHGFI--------------------------MRRGWFME-----DV 381
           S  + + D   + S+   I                          + R  F E     + 
Sbjct: 266 SSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNA 325

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +  N ++  Y ++G ++ A  +F+ +P +DV+SWN++I GYAQNG ++ +IE+F+ M  C
Sbjct: 326 VTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISC 385

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            +I P++ T  S+L A  H+GAL+    +   V +  +   +     L+ MY KCG + D
Sbjct: 386 MDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVAD 445

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F  +     V +N +IS    +G G +A+     M +EG+ PDH+T++ +LTACSH
Sbjct: 446 AHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSH 505

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +GL++EG+  F  +Q      P + HY CMVDL GRAG L  A   IQ+MP++P A ++G
Sbjct: 506 AGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYG 560

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           +LL A RIH  + LG +A+ +LFE++ +N+G YVL+SNIYA+ G+WE V  VR + +  G
Sbjct: 561 SLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGG 620

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           LKK+ G S +E   +V  F  G+R+H + + IY  L  L  KMK +G+V DKS  L+DVE
Sbjct: 621 LKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCALRDVE 680

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E+EKE +L +HSE+LAI F ++ S   + I++ KNLR+C DCH   K IS++  REI+VR
Sbjct: 681 EEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMISKLEGREIVVR 740

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D+NRFH F +G+CSC DYW
Sbjct: 741 DNNRFHCFSEGMCSCHDYW 759



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 219/483 (45%), Gaps = 86/483 (17%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
            HA ++  G I   F    +++ YA  G +  +R+ F+ ++ R +  WNSMIS   + G 
Sbjct: 117 FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGN 176

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
            +EAV  F                        N++  + I          W   V     
Sbjct: 177 ETEAVVLF------------------------NMMPARNI--------ITWTSMVTG--- 201

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
             Y + G    AR+ FD+MP R   SWNAM S Y Q     EAL++  +M  EG++ D  
Sbjct: 202 --YAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDT 259

Query: 246 TVASILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           T    +  C+   D  L+  ++ +   KH +  N FV   L++M+AKFG +  A  +FD+
Sbjct: 260 TWVVTISSCSSIGDPTLADSILRMIDQKH-IVLNSFVKTALLDMHAKFGNLEIARNIFDE 318

Query: 305 --------------------------------MMERDVVSWNSIIAAYEQSNDPITAHGF 332
                                           M +RDVVSWNS+IA Y Q+ +   +   
Sbjct: 319 LGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIEL 378

Query: 333 FTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG----NAV 387
           F  M     IQPD +T+ S+ S    +   + S  V   +  +     ++ +G    N++
Sbjct: 379 FKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK-----NIKLGISGFNSL 433

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           + MY+K G +  A  +F+ +  +DV+S+NTLI+G+A NG   EAI++   MEE   I P+
Sbjct: 434 IFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEE-EGIEPD 492

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             TY+ +L A SH G L +G      V K+     V    C+VD+ G+ G +D+A  L  
Sbjct: 493 HVTYIGVLTACSHAGLLNEG----KNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQ 548

Query: 508 QVP 510
            +P
Sbjct: 549 SMP 551



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 52/375 (13%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + + T +V  YA +GDL  +R  FD +  R+V +WN+M S Y +     EA++ F+Q 
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDV----FVAASLLHM----- 187
            L  G+ PD  T+   + +C ++ D   +  S+L++  +  +    FV  +LL M     
Sbjct: 250 -LEEGITPDDTTWVVTISSCSSIGD-PTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307

Query: 188 ---------------------------YCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                                      Y R G  ++AR+LFD+MP RD  SWN+MI+GY 
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367

Query: 221 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           Q+G +  ++++  EM     +  D +T+AS+L  C     +     +   + +  ++  +
Sbjct: 368 QNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGI 427

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
              N+LI MY+K G +  A R+F  M  RDVVS+N++I+ +  +     A     TM++ 
Sbjct: 428 SGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEE 487

Query: 340 GIQPDLLTLVSLTSIVAQ---LNDCRNS-RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           GI+PD +T + + +  +    LN+ +N  +S+    +     M         VD+  + G
Sbjct: 488 GIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYACM---------VDLLGRAG 538

Query: 396 IINSACAVFEGLPVK 410
            ++ A  + + +P+K
Sbjct: 539 ELDEAKMLIQSMPMK 553



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 87/225 (38%), Gaps = 42/225 (18%)

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKI------------------------------HARV 474
           +P+   Y  +L  YS +GA  Q + +                              HA V
Sbjct: 62  SPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYV 121

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           +K     D F+   ++DMY K G++D A +LF Q+   +   WN++IS     G   +A+
Sbjct: 122 LKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAV 181

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F  M    +    IT+ S++T  +  G +   +RYF  M E   +      +  M   
Sbjct: 182 VLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPERSVVS-----WNAMQSA 232

Query: 595 FGRAGHLGMAHNFIQNM---PVRPDASIWGALLGACRIHGNMELG 636
           + +      A N    M    + PD + W   + +C   G+  L 
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLA 277


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/663 (36%), Positives = 381/663 (57%), Gaps = 40/663 (6%)

Query: 190 RFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
           ++ L  + R+ F   P   SGS   A  +  C  G+  +A D         +  +P   +
Sbjct: 3   KYCLRPLTRRHFSTNP--SSGSELTAEFTNLCSKGHLKQAFDRFSSH----IWSEPSLFS 56

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL--------- 299
            +L  C   +++  G  +H  I+  G   + F+SN+L+N+Y+K G +  A+         
Sbjct: 57  HLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRK 116

Query: 300 ----------------------RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
                                 ++FD+M ER+V +WN+++A   Q        G F+ M 
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G  PD   L S+    A L      R VHG++ + G F  ++++ +++  MY K G +
Sbjct: 177 ELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCG-FEFNLVVVSSLAHMYMKCGSL 235

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                +   +P ++V++WNTLI G AQNG   E ++ + MM+      P++ T+VS++ +
Sbjct: 236 GEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAG-FRPDKITFVSVISS 294

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S +  L QG +IHA VIK      V V + L+ MY +CG ++ ++ +F +      V W
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +++I+ +G HG+G +A++ F QM  E +  + +TF+SLL ACSH GL  +G ++F +M E
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           ++G+KP L+HY CMVDL GR G +  A   I++MPV+ D   W  LL AC+IH   E+  
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMAR 474

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             S+ +F +D  +   YVL+SNI+A+  +W+ V +VR   RDR LKK PG S +EV N++
Sbjct: 475 RISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQI 534

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F  G+++HPK  +I   LR LT++MK  GYVPD   VL D++ ++KE+ L  HSE+LA
Sbjct: 535 HQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLA 594

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAF ++ +P  +PI++ KNLRVC DCH   K+IS+I+ REIIVRDS+RFHHFK+G CSCG
Sbjct: 595 IAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCG 654

Query: 818 DYW 820
           DYW
Sbjct: 655 DYW 657



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 231/471 (49%), Gaps = 67/471 (14%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
           G L +A D F     +S +  +   F  +L++C    +L  GK++H  ++  G   D F+
Sbjct: 35  GHLKQAFDRF-----SSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFI 89

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM----- 235
           +  LL++Y + G  + A  LF  MP ++  S N +I+GY +SG+ V A  + DEM     
Sbjct: 90  SNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNV 149

Query: 236 ---------------RLEGVSM-----------DPITVASILPVCARSDNILSGLLIHLY 269
                            EG+ +           D   + S+L  CA    +++G  +H Y
Sbjct: 150 ATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGY 209

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           + K G EFNL V ++L +MY K G +    R+   M  ++VV+WN++IA   Q+  P   
Sbjct: 210 VRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEV 269

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              +  M+ AG +PD +T VS+ S  ++L      + +H  +++ G  +   +I ++++ 
Sbjct: 270 LDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI-SSLIS 328

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MY++ G +  +  VF      DV+ W+++I  Y  +G   EAI++F  ME+  ++  N  
Sbjct: 329 MYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQ-EKLEANDV 387

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA-----------TCLVDMYGKCGR 498
           T++S+L A SH G   +GIK           FD+ V            TC+VD+ G+ G 
Sbjct: 388 TFLSLLYACSHCGLKEKGIKF----------FDLMVEKYGVKPRLEHYTCMVDLLGRYGS 437

Query: 499 IDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           +++A +L   +P ++  + W  ++S   IH + + A    R++ +E  R D
Sbjct: 438 VEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA----RRISEEVFRLD 484



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 193/394 (48%), Gaps = 9/394 (2%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           +SL I+  C  ++       +L+  C +L     L  ++      K + S   L+N Y  
Sbjct: 75  HSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVM----PRKNIMSCNILINGYFR 130

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            GD   +R  FD +  RNV TWN+M++  ++     E +  F +     G  PD +    
Sbjct: 131 SGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN-ELGFLPDEFALGS 189

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           VL+ C   R LV G+++H  V K GFE+++ V +SL HMY + G      +L   MP ++
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             +WN +I+G  Q+G   E LD  + M++ G   D IT  S++  C+    +  G  IH 
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHA 309

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            ++K G    + V ++LI+MY++ G + ++L+VF +    DVV W+S+IAAY      + 
Sbjct: 310 EVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVE 369

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M+Q  ++ + +T +SL    +              ++ +      +     +V
Sbjct: 370 AIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMV 429

Query: 389 DMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           D+  + G +  A A+   +PVK DVI+W TL++ 
Sbjct: 430 DLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/556 (39%), Positives = 353/556 (63%), Gaps = 3/556 (0%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  ++K     + F+ + L++MY K G    A R+FD+M  +D+VSWNS+++       
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 326 PITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                  F  M+ ++G QP+ +TL+S+ S  A +      +S+HG +++ G   +  ++ 
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV- 259

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N++++MY KLG +++A  +FE +PV+ ++SWN+++  +  NG A + +++F +M+    I
Sbjct: 260 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG-I 318

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
           NP+Q T V++L A +  G  RQ   IHA + +     D+ +AT L+++Y K GR++ +  
Sbjct: 319 NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 378

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++     + W A+++ + +H  G +A+  F  M+ EGV  DH+TF  LL+ACSHSGL
Sbjct: 379 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 438

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG++YF +M E + ++P L HY CMVDL GR+G L  A+  I++MP+ P + +WGALL
Sbjct: 439 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 498

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACR++GN+ELG   +++L  +D  +   Y+++SNIY+  G W    +VR+L ++R L +
Sbjct: 499 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 558

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S IE  NK+  F  G++ HP+ ++I+ +L  L  K++  G  P   FVL D++E+ 
Sbjct: 559 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 618

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K  ++  HSE+LAIAFG++ +    P+ I KNLR+CGDCH+  KF S + +R II+RDS 
Sbjct: 619 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 678

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF DG+CSC DYW
Sbjct: 679 RFHHFADGLCSCRDYW 694



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 225/432 (52%), Gaps = 12/432 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
            + +C ++     IH  V+K     D F+   L+ MY + G    A++LFD+MP +D  S
Sbjct: 128 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 187

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           WN+++SG    G     L+    MR E G   + +T+ S++  CA    +  G  +H  +
Sbjct: 188 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVV 247

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           VK G+     V N+LINMY K G +  A ++F++M  R +VSWNS++  +  +       
Sbjct: 248 VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGM 307

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M++AGI PD  T+V+L          R + S+H +I R G F  D+II  A++++
Sbjct: 308 DLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG-FNADIIIATALLNL 366

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           YAKLG +N++  +FE +  +D I+W  ++ GYA +    EAI++F +M +   +  +  T
Sbjct: 367 YAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK-EGVEVDHVT 425

Query: 451 YVSILPAYSHVGALRQGIK---IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
           +  +L A SH G + +G K   I + V +     D +  +C+VD+ G+ GR++DA  L  
Sbjct: 426 FTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY--SCMVDLLGRSGRLEDAYELIK 483

Query: 508 QVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSGLV 565
            +P   SS  W A++    ++G  +       Q+L   + P DH  ++ L    S +GL 
Sbjct: 484 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGLW 541

Query: 566 SEGQRYFHMMQE 577
            +  +   +M+E
Sbjct: 542 RDASKVRALMKE 553



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 208/440 (47%), Gaps = 19/440 (4%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
             SCT + +   +HA ++ S      F   +LV+ Y  LG    ++  FD +  +++ +W
Sbjct: 129 ISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSW 188

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL 170
           NS++S     G L   ++ F +    SG +P+  T   V+ AC +   L +GK +H  V+
Sbjct: 189 NSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVV 248

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           KLG      V  SL++MY + G  + A +LF++MPVR   SWN+M+  +  +G A + +D
Sbjct: 249 KLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMD 308

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + + M+  G++ D  T+ ++L  C  +        IH YI + G   ++ ++  L+N+YA
Sbjct: 309 LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYA 368

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  +  +F+++ +RD ++W +++A Y        A   F  M + G++ D +T   
Sbjct: 369 KLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTH 428

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPV 409
           L S  +        +  +  IM   + +E  +   + +VD+  + G +  A  + + +P+
Sbjct: 429 LLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPM 487

Query: 410 KDVIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +     W  L+     Y    L  E  E    ++  +  N     Y+ +   YS  G  R
Sbjct: 488 EPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN-----YIMLSNIYSAAGLWR 542

Query: 466 QGIKIHA-----RVIKNCLC 480
              K+ A     R+ +N  C
Sbjct: 543 DASKVRALMKERRLTRNPGC 562



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 168/352 (47%), Gaps = 24/352 (6%)

Query: 301 VFDQMMERDVVSWNSIIA--------------AYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           VF+Q + R  V WNSI++              A+  ++        F T +   I  +  
Sbjct: 54  VFNQQLTRLAVPWNSIVSPVRCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREAS 113

Query: 347 TLVSLTSIVAQL----NDCRN---SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
             + + SIV  L    + C +     ++H  +++   +  D  IG+ +V MY KLG    
Sbjct: 114 QFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNY-SDGFIGDRLVSMYFKLGYDED 172

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  +F+ +P KD++SWN+L++G +  G     +  F  M   +   PN+ T +S++ A +
Sbjct: 173 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 232

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +GAL +G  +H  V+K  +     V   L++MYGK G +D A  LF ++P  S V WN+
Sbjct: 233 DMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 292

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           ++  H  +G  +K ++ F  M   G+ PD  T V+LL AC+ +GL  + +   H      
Sbjct: 293 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES-IHAYIHRC 351

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           G    +     +++L+ + G L  + +  + +  R D   W A+L    +H 
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR-DRIAWTAMLAGYAVHA 402


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/614 (38%), Positives = 372/614 (60%), Gaps = 2/614 (0%)

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLI 266
           D  +WN+M+  +  S     AL    EM     ++ D  T  S+L  CA       G ++
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H  +VK+ L  +L++   L+NMYA  G ++ A  +F++M  R+ V W S+I+ Y +++ P
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   +  M++ G  PD +T+ +L S  A+L D      +H  I R        ++G+A
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI-REMDMKICAVLGSA 220

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           +V+MYAK G + +A  VF+ L  KDV +W+ LI GY +N  ++EA+++F+ +   + + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+ T ++++ A + +G L  G  +H  + +      V +   L+DM+ KCG ID A  +F
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIF 340

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +     + WN++++   +HG G +AL  FR M    ++PD ITF+ +LTACSH+GLV 
Sbjct: 341 DSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQ 400

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG++ F+ ++  +G++   +HYGCMVDL  RAG L  A  FI+ MP++PD +IWG++LGA
Sbjct: 401 EGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR++ N+ELG  A+  L +++  N G Y+L+SNIYA    W  V +VR L  ++G++KTP
Sbjct: 461 CRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTP 520

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G SS+ ++N    F  G+ +HP+  +I   LR +  K+K  GYV D S VL ++++++KE
Sbjct: 521 GCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKE 580

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
             ++ HSE+LA+ +G++ S     I I KNLRVC DCH   K +S+I +R+I +RD NRF
Sbjct: 581 ESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRF 640

Query: 807 HHFKDGICSCGDYW 820
           HHFKDG CSC DYW
Sbjct: 641 HHFKDGSCSCRDYW 654



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 266/487 (54%), Gaps = 23/487 (4%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLS--FSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
           +VV+G I    S  KL+    ++G L   ++   F H    +V TWNSM+  +V      
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASL 184
            A+  + +    S   PD +TFP +LK C  L++   GK +H  V+K     D+++  +L
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           L+MY   G    AR LF+ M  R+   W +MISGY ++    EAL +  +M  +G S D 
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +T+A+++  CA   ++  G+ +H +I +  ++    + + L+NMYAK G ++ A +VFD+
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRN 363
           + ++DV +W+++I  Y ++N    A   F  +   + ++P+ +T++++ S  AQL D   
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300

Query: 364 SRSVHGFIMR--RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            R VH +I R  +G     V + N+++DM++K G I++A  +F+ +  KD+ISWN+++ G
Sbjct: 301 GRWVHDYITRTQKG---HSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           +A +GL  EA+  F++M +  ++ P++ T++ +L A SH G +++G K+   +      +
Sbjct: 358 FALHGLGREALAQFRLM-QTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEA---LY 413

Query: 482 DVFVAT----CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKA 533
            V + +    C+VD+  + G + +A      +P +     W +++    ++     G++A
Sbjct: 414 GVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEA 473

Query: 534 LNFFRQM 540
             F  ++
Sbjct: 474 ARFLLKL 480



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 213/449 (47%), Gaps = 36/449 (8%)

Query: 33  SLQISPDCLE---NESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLV 86
           +LQ   + LE   N      F  L + C  L   K    LH  +V       ++  T L+
Sbjct: 62  ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121

Query: 87  NFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF 146
           N YA  GDL  +R  F+ + +RN   W SMIS Y++    +EA+   Y+     G  PD 
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEAL-LLYKKMEEDGFSPDE 180

Query: 147 YTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
            T   ++ AC  L D   G K+H  + ++  +    + ++L++MY + G    AR++FD 
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNIL 261
           +  +D  +W+A+I GY ++  + EAL +  E+   G +M P  +T+ +++  CA+  ++ 
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVA-GGSNMRPNEVTILAVISACAQLGDLE 299

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           +G  +H YI +     ++ ++N+LI+M++K G +  A R+FD M  +D++SWNS++  + 
Sbjct: 300 TGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFA 359

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR-------SVHGFIMRR 374
                  A   F  MQ   +QPD +T + + +  +     +  +       +++G  ++ 
Sbjct: 360 LHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS 419

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASE 430
             +         +VD+  + G++  A      +P++ D   W +++     Y    L  E
Sbjct: 420 EHY-------GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEE 472

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A      +E  N+     G Y+ +   Y+
Sbjct: 473 AARFLLKLEPTND-----GVYILLSNIYA 496



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 115/228 (50%), Gaps = 2/228 (0%)

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A +VF      DV++WN+++  +  + +   A++ +  M E +   P++ T+ S+L 
Sbjct: 28  VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
             + +   + G  +H +V+K  L  D+++ T L++MY  CG +  A  LF ++   + V 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W ++IS +  +   ++AL  +++M ++G  PD +T  +L++AC+    +  G +  H   
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMK-LHSHI 206

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            E  +K        +V+++ + G L  A      +  + D   W AL+
Sbjct: 207 REMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDK-DVYAWSALI 253


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/760 (35%), Positives = 421/760 (55%), Gaps = 38/760 (5%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           SG +  +F  + LV+ +A  G L  +R  F+ +  RN  T N ++   VR     EA   
Sbjct: 237 SGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296

Query: 133 FYQFTLTSGLRPDFY-----TFPPV-LKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLL 185
           F        + P+ Y     +FP   L     L  G+++H  V+  G  ++ V +   L+
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           +MY + G    AR++F  M  +DS SWN+MI+G  Q+   +EA++    MR   +     
Sbjct: 357 NMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSF 416

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T+ S +  CA       G  IH   +K G++ N+ VSN L+ +YA+ G +    ++F  M
Sbjct: 417 TLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSM 476

Query: 306 MERDVVSWNSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
            E D VSWNSII A   S   +  A   F    +AG + + +T  S+ S V+ L+     
Sbjct: 477 PEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELG 536

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYA 423
           + +HG  ++     ++    NA++  Y K G ++    +F  +   +D ++WN++I+GY 
Sbjct: 537 KQIHGLALKYN-IADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYI 595

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            N L ++A+++   M +  +   +   Y ++L A++ V  L +G+++HA  ++ CL  DV
Sbjct: 596 HNELLAKALDLVWFMMQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            V + LVDMY KCGR+D A+  F  +P                         F    LD 
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPL------------------------FANMKLDG 690

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
              PDH+TFV +L+ACSH+GL+ EG ++F  M + +G+ P ++H+ CM DL GRAG L  
Sbjct: 691 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDK 750

Query: 604 AHNFIQNMPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             +FI+ MP++P+  IW  +LGA CR +G   ELG  A++ LF+++ EN   YVL+ N+Y
Sbjct: 751 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 810

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A  G+WE + + R   +D  +KK  G+S + + + V +F  G+++HP  + IY +L+ L 
Sbjct: 811 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 870

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS-PIQIFKNLRVC 780
            KM+  GYVP   F L D+E++ KE IL+ HSE+LA+AF + +    + PI+I KNLRVC
Sbjct: 871 RKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVC 930

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GDCH+  K IS+I  R+II+RDSNRFHHF+DG CSC D+W
Sbjct: 931 GDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 167/585 (28%), Positives = 283/585 (48%), Gaps = 19/585 (3%)

Query: 55  QSCTKLHHVKRL-HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           QSC       +L H+ L  +G  K V+    L+N Y   GD   +R  FD +  RN  +W
Sbjct: 11  QSCIGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSW 70

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL-----VDGKKIHCS 168
             ++S Y R G   EA+  F +  +  G+  + Y F   L+AC+ L     + G++IH  
Sbjct: 71  ACVVSGYSRNGEHKEAL-VFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGL 129

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLA-NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           + KL +  D  V+  L+ MY + G +   A + FDD+ V++S SWN++IS Y Q+G+   
Sbjct: 130 LFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRF 189

Query: 228 ALDILDEMRLEGVSMDPITVASILPV-CARSDNILSGL-LIHLYIVKHGLEFNLFVSNNL 285
           A  +   M+ +G      T  S++   C+ ++  +  L  I   I K G   +LFV + L
Sbjct: 190 AFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGL 249

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPD 344
           ++ +AK G + HA ++F+QM  R+ V+ N ++    +      A   F  M     + P+
Sbjct: 250 VSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309

Query: 345 LLTLVSLTSI----VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
              ++ L+S     +A+    +  R VHG ++  G     V IGN +V+MYAK G I  A
Sbjct: 310 SYVIL-LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +  KD +SWN++ITG  QN    EA+E +Q M   +EI P   T +S + + + 
Sbjct: 369 RRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRR-HEILPGSFTLISSISSCAS 427

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +   + G +IH   +K  +  +V V+  L+ +Y + G +++   +F  +P    V WN+I
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSI 487

Query: 521 ISCHGIHGQG-DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           I       +   +A+  F   L  G + + ITF S+L+A S       G++  H +  ++
Sbjct: 488 IGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALKY 546

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            I         ++  +G+ G +         M  R D   W +++
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMI 591



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 237/477 (49%), Gaps = 18/477 (3%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            K  H  + K G E DV++  +L++ Y   G +  ARK+FD+MP+R+  SW  ++SGY +
Sbjct: 20  AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSR 79

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN--ILSGLLIHLYIVKHGLEFNL 279
           +G   EAL  L +M  EGV  +     S L  C   D+  IL G  IH  + K     + 
Sbjct: 80  NGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDA 139

Query: 280 FVSNNLINMYAKF-GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            VSN LI+MY K  G + +ALR FD +  ++ VSWNSII+ Y Q+ D   A   F +MQ 
Sbjct: 140 VVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQC 199

Query: 339 AGIQPDLLTLVSLTSIVAQLN--DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            G +P   T  SL +    L   D R    +   I + G F+ D+ +G+ +V  +AK G 
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG-FLTDLFVGSGLVSAFAKSGS 258

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL- 455
           +  A  +F  +  ++ ++ N L+ G  +     EA ++F  M    +++P   +YV +L 
Sbjct: 259 LIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLS 316

Query: 456 --PAYS---HVGALRQGIKIHARVIKNCLC-FDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
             P YS    VG L++G ++H  VI   L  F V +   LV+MY KCG I DA  +F  +
Sbjct: 317 SFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM 375

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
               SV WN++I+    +    +A+  ++ M    + P   T +S +++C+       GQ
Sbjct: 376 TEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQ 435

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +  H    + GI  ++     ++ L+   G L        +MP     S W +++GA
Sbjct: 436 Q-IHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVS-WNSIIGA 490


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 264/766 (34%), Positives = 434/766 (56%), Gaps = 27/766 (3%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANL-GDLSFSRHTFDHISYRNVYTWNSMISVY 120
           H+++LHA ++ +      +    L+N    L     ++   F+     NV+ + SM+  Y
Sbjct: 16  HLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFY 75

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFV 180
                 ++ V   ++     G+RPD + +P ++K+  N   G   H  VLKLG   D FV
Sbjct: 76  SHLQDHAKVV-LMFEHMQGCGVRPDAFVYPILIKSAGN--GGIGFHAHVLKLGHGSDAFV 132

Query: 181 AASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
             +++ MY R G    ARK+FD++P   R    WNAM+SGY +  +  +A  + D M   
Sbjct: 133 RNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPER 192

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            V    IT  +++   A+  ++ +       +     E ++   N +++ YA+ G+    
Sbjct: 193 NV----ITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVSWNAMLSGYAQNGLAEEV 244

Query: 299 LRVFDQM----MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           LR+FD+M    +E D  +W ++I+A     DP  A     T+ Q  IQ +     +L  +
Sbjct: 245 LRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDM 304

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A+      +R +   +   G +  + +  NA++  Y ++G ++SA  +F  +P ++V++
Sbjct: 305 YAKCGSIGAARRIFDEL---GAY-RNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVT 360

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN++I GYAQNG ++ AIE+F+ M    ++ P++ T VS++ A  H+GAL  G  +   +
Sbjct: 361 WNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFL 420

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            +N +   +     ++ MY +CG ++DA  +F ++     V +N +IS    HG G +A+
Sbjct: 421 TENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAI 480

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           N    M + G+ PD +TF+ +LTACSH+GL+ EG++ F  +++     P + HY CMVDL
Sbjct: 481 NLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDL 535

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GR G L  A   ++ MP+ P A ++G+LL A RIH  +ELG +A+++LFE++ +N G +
Sbjct: 536 LGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNF 595

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           +L+SNIYA+ G+W+ V+ +R   +  G+KKT GWS +E   K+  F   +R+H + + IY
Sbjct: 596 ILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIY 655

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L  L  KM+  GY+ DKS VL+DVEE+EKE I+ +HSE+LAI + ++ S   + I++ 
Sbjct: 656 QLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVV 715

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLRVC DCH   K IS++  R IIVRD+NRFH F DG+CSC DYW
Sbjct: 716 KNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 13/273 (4%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D++  C  +   +R+   L   G  +   +   +++ Y  +G+L  +R  F+ +  RNV 
Sbjct: 303 DMYAKCGSIGAARRIFDEL---GAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVV 359

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
           TWNSMI+ Y + G+ + A++ F +      L PD  T   V+ AC +L    ++   V++
Sbjct: 360 TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL-GALELGNWVVR 418

Query: 172 LGFEWDVFVAAS----LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
              E  + ++ S    ++ MY R G    A+++F +M  RD  S+N +ISG+   G+ VE
Sbjct: 419 FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVE 478

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A++++  M+  G+  D +T   +L  C+ +  +  G  +   I    ++        +++
Sbjct: 479 AINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYAC----MVD 534

Query: 288 MYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           +  + G +  A R  ++M ME     + S++ A
Sbjct: 535 LLGRVGELEDAKRTMERMPMEPHAGVYGSLLNA 567


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/808 (34%), Positives = 423/808 (52%), Gaps = 80/808 (9%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF-- 133
           ++   +   +V  Y   GD++ +R  FD +  R+V +WN+M++ Y     + EA + F  
Sbjct: 123 VRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFER 182

Query: 134 ----------------------------YQFTLTSGLRPDFYTFPPVLKACRNLVDGK-- 163
                                       ++  L  G+ P+      VL A R+L  GK  
Sbjct: 183 MPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHL--GKPG 240

Query: 164 ---KIHCSVLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGY 219
               IH  V K GFE DV V  ++L+ Y +   + + A K F+ M  R+  +W+ +I+  
Sbjct: 241 ILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAAL 300

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q+G   +A  +     L+ V     +  S+L   AR   I    ++   I     E N+
Sbjct: 301 SQAGRIDDAFAVYQRDPLKSVP----SRTSMLTGLARYGRIDDAKILFDQI----HEPNV 352

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
              N +I  Y +  M+  A  +F++M  R+ +SW  +IA Y ++     A      + + 
Sbjct: 353 VSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRK 412

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G+ P L +L S     + +      + VH   ++ G      +  NA++ +Y K   I S
Sbjct: 413 GMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVC-NALITLYGKYRSIGS 471

Query: 400 -------------------------------ACAVFEGLPVKDVISWNTLITGYAQNGLA 428
                                          A  VF  +P  DV+SW T+I+  AQ    
Sbjct: 472 VRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQG 531

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
           +EA+E+F+ M    E+ PN      +L    ++GA + G +IH   IK  +   + VA  
Sbjct: 532 NEAVEIFRSMLHEREL-PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANA 590

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LV MY KC   D ++ +F  +       WN II+ +  HG G +A+  ++ M+  GV P+
Sbjct: 591 LVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPN 649

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            +TFV LL ACSHSGLV EG ++F  M  ++G+ P L+HY CMVDL GRAG +  A +FI
Sbjct: 650 EVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFI 709

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
            +MP+ PD+ IW ALLGAC+IH N+E+G  A+++LF ++  N G YV++SNIY++ G W+
Sbjct: 710 YDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWD 769

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V +VR L ++RG+ K PG S +++ NK+  F TG+  H + + IY  L  L   +K+ G
Sbjct: 770 EVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATG 829

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVPD  FVL D++E++KE  L  HSE+LA+A+G++ +P   PIQI KNLR+CGDCH + K
Sbjct: 830 YVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIK 889

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSC 816
           F+S +T+REI VRD NRFHHF++G CSC
Sbjct: 890 FVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 260/556 (46%), Gaps = 58/556 (10%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYA-NLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           ++ +H L+  +G  + V   T ++N Y  ++  L  +   F+ ++ RN YTW+++I+   
Sbjct: 242 LESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALS 301

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVA 181
           + GR+ +A   + +  L S   P   +    L     + D K +   +     E +V   
Sbjct: 302 QAGRIDDAFAVYQRDPLKS--VPSRTSMLTGLARYGRIDDAKILFDQI----HEPNVVSW 355

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +++  Y +  + + A  LF+ MP R++ SW  MI+GY ++G + +AL  L  +  +G+ 
Sbjct: 356 NAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGML 415

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
               ++ S    C+  + + +G  +H   VK G +FN +V N LI +Y K+  +    ++
Sbjct: 416 PSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQI 475

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M  +D VS+NS ++A  Q+N    A   F  M      PD+++  ++ S  AQ +  
Sbjct: 476 FDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQG 531

Query: 362 RNS-----------------------------------RSVHGFIMRRGWFMEDVIIGNA 386
             +                                   + +H   ++ G     +++ NA
Sbjct: 532 NEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLG-MDSGLVVANA 590

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           +V MY K    +S   VF+ +  +D+ +WNT+ITGYAQ+GL  EAI ++Q+M     + P
Sbjct: 591 LVSMYFKCSSADS-LKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAG-VLP 648

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV-ATCLVDMYGKCGRIDDAMSL 505
           N+ T+V +L A SH G + +G +    +  +     +     C+VD+ G+ G +  A   
Sbjct: 649 NEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHF 708

Query: 506 FYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE--GVRPDHI-TFVSLLTACSH 561
            Y +P    SV W+A++    IH    K +   R+  ++   + P +   +V L    S 
Sbjct: 709 IYDMPIEPDSVIWSALLGACKIH----KNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSS 764

Query: 562 SGLVSEGQRYFHMMQE 577
            G+  E  +   +M+E
Sbjct: 765 QGMWDEVAKVRKLMKE 780



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 244/553 (44%), Gaps = 39/553 (7%)

Query: 59  KLHHVKRLHALLVV--SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           +L  + RLH    V  S   + + +   ++  Y N G     R   D IS  N+ T   +
Sbjct: 42  ELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTIL 101

Query: 117 ISVYVRCGRLSEAVDCF----YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL 172
           +S Y R GR+ +A   F     + T+        Y     +   R L D           
Sbjct: 102 LSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSR------ 155

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
               DV    ++L  YC   L   AR LF+ MP R+  SW  MISGY        A D+ 
Sbjct: 156 ----DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMF 211

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLFVSNNLINMYA 290
             M  EG++ +   + S+L           G+L  IH+ + K G E ++ V   ++N Y 
Sbjct: 212 RTMLCEGMTPEQPNLVSVLSAVRHLGK--PGILESIHVLVHKTGFERDVVVGTAILNGYT 269

Query: 291 K-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           K   M+  A++ F+ M  R+  +W++IIAA  Q+     A   +        +  L ++ 
Sbjct: 270 KDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQ-------RDPLKSVP 322

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S TS++  L   R  R     I+       +V+  NA++  Y +  +++ A  +F  +P 
Sbjct: 323 SRTSMLTGL--ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPF 380

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           ++ ISW  +I GYA+NG + +A+   Q +     + P+  +  S   A S++ AL  G +
Sbjct: 381 RNTISWAGMIAGYARNGRSEQALVSLQALHR-KGMLPSLSSLTSSFFACSNIEALETGKQ 439

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H+  +K    F+ +V   L+ +YGK   I     +F ++    +V +N+ +S    +  
Sbjct: 440 VHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNL 499

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            D+A + F  M      PD +++ ++++AC+ +   +E    F  M  E      L +  
Sbjct: 500 FDEARDVFNNMPS----PDVVSWTTIISACAQADQGNEAVEIFRSMLHE----RELPNPP 551

Query: 590 CMVDLFGRAGHLG 602
            +  L G +G+LG
Sbjct: 552 ILTILLGLSGNLG 564



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 156/376 (41%), Gaps = 53/376 (14%)

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I    + G +  A  VFD M  RD+++WNS+I AY  +  P         +       +L
Sbjct: 40  IRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGG----NL 95

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T   L S  A+    R++R V       G  + + +  NA+V  Y + G I  A  +F+
Sbjct: 96  RTGTILLSGYARAGRVRDARRVFD-----GMGVRNTVAWNAMVTCYVQNGDITLARKLFD 150

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE------------------------- 440
            +P +DV SWNT++TGY  + L  EA  +F+ M E                         
Sbjct: 151 AMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDM 210

Query: 441 -----CNEINPNQGTYVSILPAYSHVGALRQGI--KIHARVIKNCLCFDVFVATCLVDMY 493
                C  + P Q   VS+L A  H+G  + GI   IH  V K     DV V T +++ Y
Sbjct: 211 FRTMLCEGMTPEQPNLVSVLSAVRHLG--KPGILESIHVLVHKTGFERDVVVGTAILNGY 268

Query: 494 GK-CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
            K    +D A+  F  +   +   W+ II+     G+ D A   +++   + V     + 
Sbjct: 269 TKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SR 324

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
            S+LT  +  G + + +  F  + E     P++  +  M+  + +   +  A +    MP
Sbjct: 325 TSMLTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMP 379

Query: 613 VRPDASIWGALLGACR 628
            R   S  G + G  R
Sbjct: 380 FRNTISWAGMIAGYAR 395


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/721 (35%), Positives = 419/721 (58%), Gaps = 13/721 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C KL  ++    LH+LLV  G   T F    LV+ YA   DLS +R  FD   
Sbjct: 148 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 207

Query: 107 YR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
            + +   WNS++S Y   G+  E ++ F +  +T G  P+ YT    L AC        G
Sbjct: 208 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLG 266

Query: 163 KKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           K+IH SVLK      +++V  +L+ MY R G    A ++   M   D  +WN++I GY Q
Sbjct: 267 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 326

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    EAL+   +M   G   D +++ SI+    R  N+L+G+ +H Y++KHG + NL V
Sbjct: 327 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 386

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N LI+MY+K  +  +  R F +M ++D++SW ++IA Y Q++  + A   F  + +  +
Sbjct: 387 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 446

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + D + L S+    + L      + +H  I+R+G    D +I N +VD+Y K   +  A 
Sbjct: 447 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYAT 504

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VFE +  KDV+SW ++I+  A NG  SEA+E+F+ M E   ++ +    + IL A + +
Sbjct: 505 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASL 563

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL +G +IH  +++   C +  +A  +VDMY  CG +  A ++F ++ R   + + ++I
Sbjct: 564 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 623

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +G+HG G  A+  F +M  E V PDHI+F++LL ACSH+GL+ EG+ +  +M+ E+ +
Sbjct: 624 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 683

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P  +HY C+VD+ GRA  +  A  F++ M   P A +W ALL ACR H   E+G +A+ 
Sbjct: 684 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQ 743

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           RL E++ +N G  VL+SN++A  G+W  V++VR+  +  G++K PG S IE++ KV  F 
Sbjct: 744 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFT 803

Query: 702 TGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             +++HP+ ++IY++L  +T K+ + +GYV D  FVL +V+E EK  +L  HSER+AIA+
Sbjct: 804 ARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAY 863

Query: 761 G 761
           G
Sbjct: 864 G 864



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 287/556 (51%), Gaps = 16/556 (2%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           FD +  R  + WN+MI  YV  G  + A+  ++   +  G+     +FP +LKAC  L D
Sbjct: 102 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRD 160

Query: 162 ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMIS 217
              G ++H  ++KLG+    F+  +L+ MY +    + AR+LFD    + D+  WN+++S
Sbjct: 161 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 220

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y  SG ++E L++  EM + G + +  T+ S L  C        G  IH  ++K     
Sbjct: 221 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 280

Query: 278 N-LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
           + L+V N LI MY + G M  A R+  QM   DVV+WNS+I  Y Q+     A  FF+ M
Sbjct: 281 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 340

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
             AG + D +++ S+ +   +L++      +H ++++ GW   ++ +GN ++DMY+K  +
Sbjct: 341 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNL 399

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
                  F  +  KD+ISW T+I GYAQN    EA+E+F+ + +   +  ++    SIL 
Sbjct: 400 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILR 458

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A S + ++    +IH  +++  L  D  +   LVD+YGKC  +  A  +F  +     V 
Sbjct: 459 ASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS 517

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMM 575
           W ++IS   ++G   +A+  FR+M++ G+  D +  + +L+A +    +++G+  + +++
Sbjct: 518 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 577

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           ++ F ++  +     +VD++   G L  A      +  R     + +++ A  +HG    
Sbjct: 578 RKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---C 631

Query: 636 GAVASDRLFEVDSENV 651
           G  A +   ++  ENV
Sbjct: 632 GKAAVELFDKMRHENV 647



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 221/437 (50%), Gaps = 9/437 (2%)

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           K+FD+MP R + +WN MI  Y  +G    AL +   MR+EGV +   +  ++L  CA+  
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSII 317
           +I SG  +H  +VK G     F+ N L++MYAK   +  A R+FD   E+ D V WNSI+
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           ++Y  S   +     F  M   G  P+  T+VS  +     +  +  + +H  +++    
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             ++ + NA++ MY + G +  A  +   +   DV++WN+LI GY QN +  EA+E F  
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M        ++ +  SI+ A   +  L  G+++HA VIK+    ++ V   L+DMY KC 
Sbjct: 340 MIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 398

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
                   F ++     + W  +I+ +  +    +AL  FR +  + +  D +   S+L 
Sbjct: 399 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 458

Query: 558 ACS--HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           A S   S L+ + + + H++++   +   +++   +VD++G+  ++G A    +++  + 
Sbjct: 459 ASSVLKSMLIVK-EIHCHILRKGL-LDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK- 513

Query: 616 DASIWGALLGACRIHGN 632
           D   W +++ +  ++GN
Sbjct: 514 DVVSWTSMISSSALNGN 530


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/651 (39%), Positives = 373/651 (57%), Gaps = 48/651 (7%)

Query: 213 NAMISGYCQSGNAVEALDIL-DEMRL-EGVSM-----DPIT--VASILPVCARSDNILSG 263
           +A I+  C S    EA+DIL  + RL E V +      P      ++L  C +   +  G
Sbjct: 79  DAYINRLCDSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEG 138

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE-- 321
             +H +I   G    L++SN L++MYAK G +  A +VFD+M+ RD+ SWN +I+ Y   
Sbjct: 139 KQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKG 197

Query: 322 -----------------------------QSNDPITAHGFFTTMQQAGI-QPDLLTLVSL 351
                                        Q N P  A   +  MQ+    + +  T+ S 
Sbjct: 198 GNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSA 257

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            +  A +      + +HG IMR G    D ++  +++DMY K G I  A  +F+ +  +D
Sbjct: 258 LAASAAIPSLHMGKKIHGHIMRMG-LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERD 316

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V+SW T+I  Y +NG   E   +F+ +   N I PN  T+  +L A + + A   G +IH
Sbjct: 317 VVSWTTMIHTYLKNGRREEGFALFRHLMNSN-IMPNDFTFAGVLNACADLAAEDLGKQIH 375

Query: 472 ARVIKNCLCFDVF--VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           A +++  + FD F   A+ LV MY KCG I++A S+F  +P+     W +++  +  HGQ
Sbjct: 376 AYMVR--VGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQ 433

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            DKAL+FF  +L  G +PD I F+ +L+AC+H+GLV +G  YFH ++E+ G+   + HY 
Sbjct: 434 HDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYA 493

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           C++DL  RAG    A + I  MP++PD  IW ALLG CRIHGN+EL   A+  LFE++ E
Sbjct: 494 CIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPE 553

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           N   YV ++NIYA+ G       +R     RG+ K PG S IE+  +V +F  G+ +HPK
Sbjct: 554 NPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPK 613

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            ++I + L  L+ +MK +GYVPD +FVL DVE ++KE  L+ HSE+LA+AFGIIS+P  +
Sbjct: 614 SKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGT 673

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PI++FKNLR C DCHN  KFIS IT R+IIVRDSNRFH F+ G CSC DYW
Sbjct: 674 PIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 239/494 (48%), Gaps = 58/494 (11%)

Query: 118 SVYVRCG--RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 172
           ++ + CG  RL EAV   Y+       +P    +  +LK C   R L +GK++H  +   
Sbjct: 94  AIDILCGQSRLREAVQLLYRIE-----KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTS 148

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G    ++++  LL MY + G    A K+FD+M  RD  SWN MISGY + GN  +A ++ 
Sbjct: 149 G-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLF 207

Query: 233 DEMRLEGVSMDPITVASILPVCA---RSDNILS--------------------------- 262
           D+M     + D  +  +I+  C    R +  L                            
Sbjct: 208 DKMP----NRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAA 263

Query: 263 ------GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                 G  IH +I++ GL+ +  V  +L++MY K G +  A  +FD+M ERDVVSW ++
Sbjct: 264 IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTM 323

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y ++         F  +  + I P+  T   + +  A L      + +H +++R G 
Sbjct: 324 IHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVG- 382

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F       +A+V MY+K G I +A +VFE LP  D+ SW +L+ GYAQ+G   +A+  F+
Sbjct: 383 FDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFE 442

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGK 495
           ++ +     P+   ++ +L A +H G + +G++  H+   K+ L   +    C++D+  +
Sbjct: 443 LLLKSG-TKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLAR 501

Query: 496 CGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH-ITFV 553
            G+  +A S+  ++P +     W A++    IHG  + A    + + +  + P++  T+V
Sbjct: 502 AGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE--IEPENPATYV 559

Query: 554 SLLTACSHSGLVSE 567
           +L    + +G+ +E
Sbjct: 560 TLANIYASAGMRAE 573



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 193/453 (42%), Gaps = 51/453 (11%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L + C K   L   K++HA +  SG I  ++ S +L++ YA  G L  +   FD + +R+
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSGSI-GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRD 183

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC------------- 156
           + +WN MIS YV+ G   +A + F +         D +++  ++  C             
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKMP-----NRDNFSWTAIISGCVQHNRPEEALELY 238

Query: 157 --------------------------RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
                                      +L  GKKIH  ++++G + D  V  SLL MY +
Sbjct: 239 RLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGK 298

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            G    AR +FD M  RD  SW  MI  Y ++G   E   +   +    +  +  T A +
Sbjct: 299 CGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGV 358

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L  CA       G  IH Y+V+ G +     ++ L++MY+K G + +A  VF+ + + D+
Sbjct: 359 LNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDL 418

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
            SW S++  Y Q      A  FF  + ++G +PD +  + + S  A              
Sbjct: 419 FSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHS 478

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLAS 429
           I  +      +     ++D+ A+ G    A ++   +P+K D   W  L+ G   +G   
Sbjct: 479 IKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLE 538

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            A    + + E    NP   TYV++   Y+  G
Sbjct: 539 LAKRAAKSLFEIEPENP--ATYVTLANIYASAG 569


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/632 (37%), Positives = 364/632 (57%), Gaps = 24/632 (3%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMR--LEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           SW   I      G  + A+ +  +MR  +   S  P ++ + L  CA          +H 
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHAL--------------------RVFDQMMER 308
             ++ G   + F +N L+N+  K     H                      +VFD+M+ER
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           D VSWN++I    +      A      M + G  PD  TL ++  I A+  D +    VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
           G+ ++ G F  DV +G++++DMYA    ++ +  VF+     D + WN+++ GYAQNG  
Sbjct: 194 GYAIKNG-FDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 252

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            EA+ +F+ M +   + P   T+ S++PA+ ++  LR G ++HA +I+     ++F+++ 
Sbjct: 253 EEALGIFRRMLQAG-VRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSS 311

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           L+DMY KCG +D A  +F  +     V W A+I  + +HG   +A   F +M    V+P+
Sbjct: 312 LIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPN 371

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
           HITF+++LTACSH+GLV  G +YF+ M  ++G  P L+H   + D  GRAG L  A+NFI
Sbjct: 372 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 431

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
             M ++P +S+W  LL ACR+H N  L    + ++FE++ +++G +V++SN+Y+  G+W 
Sbjct: 432 SEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWN 491

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
              ++R   R +G+KK P  S IEV NK+ +F   +++HP Y++I D L   + +M   G
Sbjct: 492 EAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQG 551

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVP+   VLQD+EE++K  +L  HSE+LAI FGIIS+PP + I++ KNLRVC DCH  TK
Sbjct: 552 YVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATK 611

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FIS+I  REI+VRD NRFH FKDG CSCGD+W
Sbjct: 612 FISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 199/439 (45%), Gaps = 41/439 (9%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANL---------------GDLSFS-----RHTFDHI 105
           LHAL + SG     F++  L+N    L               G L  +     R  FD +
Sbjct: 71  LHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEM 130

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP---PVLKACRNLVDG 162
             R+  +WN++I       R  EA+    +     G  PD +T     P+   C ++  G
Sbjct: 131 LERDAVSWNTLILGCAEHKRHQEALSMVREM-WRDGFMPDTFTLSTVLPIFAECADIKRG 189

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
             +H   +K GF+ DVFV +SL+ MY      + + K+FD     D+  WN+M++GY Q+
Sbjct: 190 MVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQN 249

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G+  EAL I   M   GV   P+T +S++P       +  G  +H Y+++     N+F+S
Sbjct: 250 GSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFIS 309

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           ++LI+MY K G +  A RVF+ +   D+VSW ++I  Y        A   F  M+   ++
Sbjct: 310 SSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVK 369

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+ +T +++ +  +      N       +  +  F+  +    A+ D   + G ++ A  
Sbjct: 370 PNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYN 429

Query: 403 VFEGLPVKDVIS-WNTLITG---YAQNGLASE-AIEVFQMMEECNEINPNQGTYVSILPA 457
               + +K   S W+TL+     +    LA E A ++F++  +      + G++V +   
Sbjct: 430 FISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPK------SMGSHVILSNM 483

Query: 458 YSHVG------ALRQGIKI 470
           YS  G       LR+ ++I
Sbjct: 484 YSASGRWNEAAQLRKSMRI 502



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 4/214 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           +F  C  +     +H   + +G    VF  + L++ YAN   + +S   FD  S  +   
Sbjct: 179 IFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVL 238

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSV 169
           WNSM++ Y + G + EA+  F +  L +G+RP   TF  ++ A  NL     GK++H  +
Sbjct: 239 WNSMLAGYAQNGSVEEALGIFRRM-LQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYL 297

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++  F  ++F+++SL+ MYC+ G  ++AR++F+ +   D  SW AMI GY   G   EA 
Sbjct: 298 IRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAF 357

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
            + + M L  V  + IT  ++L  C+ +  + +G
Sbjct: 358 VLFERMELGNVKPNHITFLAVLTACSHAGLVDNG 391


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/620 (39%), Positives = 376/620 (60%), Gaps = 14/620 (2%)

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI--TVASILPVCARSDNILSGLL 265
           DS + N +I   C+ GN  +AL +L +        +P   T   ++  C R +++  G+ 
Sbjct: 46  DSNNNNPLIQSLCKQGNLNQALQVLSQ------EPNPTQHTYELLILSCTRQNSLPQGID 99

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H +++  G + + F++  LINMY++   + +A +VFD+  +R +  WN++  A   +  
Sbjct: 100 LHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGY 159

Query: 326 PITAHGFFTTMQQAGIQPDLLT----LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
                  +  M + G+  D  T    L +  +  A ++   N R +HG I+R G F   V
Sbjct: 160 GREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHG-FEGHV 218

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEE 440
            I   ++DMYA+ G + +A  VF+ +PVK+V+SW+ +I  Y++NG   EA+E+F +MM E
Sbjct: 219 HIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLE 278

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
             ++ PN  T VS+L A + + AL QG  +H  +++  L   + V + LV +Y +CG ++
Sbjct: 279 NQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLE 338

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
               +F ++ +   V WN++IS +GIHG G KA+  F++M+D+G+ P  I+FVS+L ACS
Sbjct: 339 LGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACS 398

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H+GLV EG+  F  M     I P ++HY CMVDL GRA  L  A   I +M + P   +W
Sbjct: 399 HAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVW 458

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           G+LLG+CRIH N+EL   A+ RLFE++  N G YVL+++IYA    W  V  V+ L   R
Sbjct: 459 GSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEAR 518

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           GL+K PG S IE+  K+  F + +  +P+ E+++  L  L+ +MK  GYVPD   VL D+
Sbjct: 519 GLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDL 578

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           + +EKE I+  HSE+LA+AFG+I+S     I+I KNLR+C DCH+ TKFIS+   REI+V
Sbjct: 579 DPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILV 638

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD NRFH F+DG+CSCGDYW
Sbjct: 639 RDVNRFHLFQDGVCSCGDYW 658



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 194/373 (52%), Gaps = 13/373 (3%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           ++ L  SCT+ + + +   LH  L+  G  +  F +TKL+N Y+ L  +  +R  FD   
Sbjct: 81  YELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTR 140

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-------L 159
            R +Y WN++       G   E +D + +     G+  D +T+  VLKAC         L
Sbjct: 141 KRTIYVWNALFRALTLAGYGREVLDLYRRMNRI-GVPSDRFTYTYVLKACVASEAFVSLL 199

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           ++G++IH  +L+ GFE  V +  +LL MY RFG    A ++FD MPV++  SW+AMI+ Y
Sbjct: 200 LNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACY 259

Query: 220 CQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            ++G  +EAL++  +M LE   + P  +T+ S+L  CA    +  G L+H YI++ GL+ 
Sbjct: 260 SKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDS 319

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            L V + L+ +YA+ G +    RVF++M +RDVVSWNS+I++Y        A   F  M 
Sbjct: 320 ILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMI 379

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
             G+ P  ++ VS+    +        + +   ++R       V     +VD+  +   +
Sbjct: 380 DQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRL 439

Query: 398 NSACAVFEGLPVK 410
           + A  + + + ++
Sbjct: 440 DEAAKIIDDMRIE 452



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 15/167 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  ++  G    +   + LV  YA  G+L      F+ +  R+V +WNS+IS Y   
Sbjct: 306 KLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIH 365

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWDVFVA 181
           G   +A+  F +  +  GL P   +F  VL AC +  LV+  K+    +  G +    + 
Sbjct: 366 GFGRKAIQIFKEM-IDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHK----IF 420

Query: 182 ASLLHMYCR---FGLAN---VARKLFDDMPVRDSGS-WNAMISGYCQ 221
            S+ H  C     G AN    A K+ DDM +      W +++ G C+
Sbjct: 421 PSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLL-GSCR 466


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/557 (42%), Positives = 349/557 (62%), Gaps = 4/557 (0%)

Query: 266 IHLYIVKHGLEF-NLFVSNNLINMYAKF-GMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           IH + ++HG+   N  +   LI     F   M +A ++F Q+   ++ +WN++I  Y +S
Sbjct: 59  IHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAES 118

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            +P+ A   +  M  + I+PD  T   L   +A+L D R    VH   +R G F   V +
Sbjct: 119 ENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNG-FESLVFV 177

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            N +V MYA  G   SA  +FE +  +++++WN++I GYA NG  +EA+ +F+ M     
Sbjct: 178 QNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG-LRG 236

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + P+  T VS+L A + +GAL  G + H  ++K  L  ++     L+D+Y KCG I  A 
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F ++   S V W ++I    ++G G +AL  F+++  +G+ P  ITFV +L ACSH G
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCG 356

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           +V EG  YF  M+EE+GI P ++HYGCMVDL GRAG +  AH FIQNMP++P+A +W  L
Sbjct: 357 MVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTL 416

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           LGAC IHG++ LG VA  +L +++ ++ G YVL+SN+YA+  +W  V +VR      G+K
Sbjct: 417 LGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVK 476

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           KTPG S +E+ N++  F  G+R+HP+ E+IY +L  +T  +K  GYVP  S VL D+EE+
Sbjct: 477 KTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADIEEE 536

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EKE  L+ HSE++AIAF +I++    PI++ KNLRVC DCH   K IS++ +REI+VRD 
Sbjct: 537 EKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVVRDR 596

Query: 804 NRFHHFKDGICSCGDYW 820
           +RFHHFKDG CSC DYW
Sbjct: 597 SRFHHFKDGHCSCKDYW 613



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 179/342 (52%), Gaps = 17/342 (4%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +S++   F  I   N++TWN+MI  Y        A++ + Q  + S + PD +T+P +LK
Sbjct: 90  MSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHV-SCIEPDTHTYPFLLK 148

Query: 155 ACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           A   L+D   G+K+H   ++ GFE  VFV  +L+HMY   G A  A KLF+ M  R+  +
Sbjct: 149 AIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVT 208

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN++I+GY  +G   EAL +  EM L GV  D  T+ S+L  CA    +  G   H+Y+V
Sbjct: 209 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 268

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K GL+ NL   N L+++YAK G +R A +VFD+M E+ VVSW S+I     +     A  
Sbjct: 269 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 328

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFIMRRGWFMEDVIIGN----- 385
            F  +++ G+ P  +T V +      L  C +   V  GF   +    E  I+       
Sbjct: 329 LFKELERKGLMPSEITFVGV------LYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYG 382

Query: 386 AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG 426
            +VD+  + G++  A    + +P++ + + W TL+     +G
Sbjct: 383 CMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 145/293 (49%), Gaps = 11/293 (3%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYAN 91
           Q+   C+E ++    F  L ++  KL  V+   ++H++ + +G    VF    LV+ YA 
Sbjct: 130 QMHVSCIEPDTHTYPF--LLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAA 187

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            G    +   F+ ++ RN+ TWNS+I+ Y   GR +EA+  F +  L  G+ PD +T   
Sbjct: 188 CGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGL-RGVEPDGFTMVS 246

Query: 152 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L AC     L  G++ H  ++K+G + ++    +LL +Y + G    A K+FD+M  + 
Sbjct: 247 LLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKS 306

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIH 267
             SW ++I G   +G   EAL++  E+  +G+    IT   +L  C+    +  G     
Sbjct: 307 VVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFK 366

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
               ++G+   +     ++++  + G+++ A      M M+ + V W +++ A
Sbjct: 367 RMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/875 (31%), Positives = 444/875 (50%), Gaps = 115/875 (13%)

Query: 50  FDDLFQSCTKLH---HVKR-LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           F D F+ C+  H   H+ R LHA L++SG   ++F    L++ Y+N G    +   F   
Sbjct: 10  FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQF-----------TLTSGLRP---------- 144
            +RN++TWN+MI   V   R+S+A   F +            T+ SG             
Sbjct: 70  HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129

Query: 145 ---------------DFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLH 186
                          D ++F  V+KAC +L D +   ++H  V KLGF  +  +  S++ 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 187 MYCRFGLANVARKLFDD-------------------------------MPVRDSGSWNAM 215
           MY + G  ++A  +F D                               MP RD  SWN +
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           IS + Q G  V+ L +  EM  +G S + +T  S+L  CA + ++  G  +H  I++   
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             +L   N LI+MYAK G +  A RVF  + E D +SWNS+I           A   F  
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M+++ +  D   L ++  + +  +       +HG+ ++ G       +GNA++ MYAK G
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG-MGSSAPVGNAIITMYAKCG 428

Query: 396 IINSACAVFEGLPVKDVISWNTLITG-------------------------------YAQ 424
             + A  VF  +P+++ ISW  +IT                                Y Q
Sbjct: 429 DTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQ 488

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NG + E ++++  M   N + P+  T+ + + A + +  ++ G+++     K  L  +V 
Sbjct: 489 NGFSEEGLKLYVSMRS-NGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVS 547

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           VA  +V MY +CG I +A + F  +     + WNA+++    +G G K ++ F  ML   
Sbjct: 548 VANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTE 607

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
            +P+HI++VS+L+ CSH GLV+EG+ YF  M   FGI P  +H+ CMVDL GRAG L  A
Sbjct: 608 CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQA 667

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
            + I+ MP +P+A++W ALLG+CR+H ++ L   A+ +L E+D E    YVL+SN+Y+  
Sbjct: 668 KDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSES 727

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G+ + V ++R L + +G++ + G S IEV+N+V +F     +HP+ +++Y +L  +   +
Sbjct: 728 GELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMI 787

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           +  G    K   ++      K++    HSE+LA AFG+++ P   PI + KNLRVC DCH
Sbjct: 788 EDTG----KYITVESSVHRSKKY----HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCH 839

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
              K +S +T RE+I+RD  RFHHFKDGICSC DY
Sbjct: 840 LVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 245/659 (37%), Positives = 377/659 (57%), Gaps = 45/659 (6%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYCQ 221
           ++H  VL+ G   D +V+ +LL  Y     +N   A K+F  +P  +   WN +I G  +
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    +A+     M ++    +  T  ++   C+ +  +  G  IH ++VKHG+  ++ +
Sbjct: 111 NNKLFKAIYFYGRMVIDARP-NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            +  I+MYA FG +  A ++F    E DVV WN++I  Y +      A G F  M    I
Sbjct: 170 KSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
                                             W        N +++  AK G +  A 
Sbjct: 229 G--------------------------------SW--------NVMINGLAKGGNLGDAR 248

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+ +  +D ISW++++ GY   G   EA+E+FQ M+   E  P +    S+L A S++
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR-EETRPGRFILSSVLAACSNI 307

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GA+ QG  +HA + +N +  D  + T L+DMY KCGR+D    +F ++       WNA+I
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
               IHG+ + AL  F ++ +  ++P+ IT V +LTAC+H+G V +G R F  M+E +G+
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P L+HYGCMVDL GR+G    A + I +MP++P+A++WGALLGACRIHGN +L      
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGK 487

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L E++ +N G YVL+SNIYA VG+++ V ++R L +DRG+K  PG S +++N  V  F 
Sbjct: 488 ILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFK 547

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+ +HP+ ++IY +L+ +  +++  G+ PD S VL D++E+EKE  +  HSE+LAIAFG
Sbjct: 548 MGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFG 607

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I++ P   I I KNLRVC DCH+ TK ISQI +REIIVRD  R+HHFK+G CSC D+W
Sbjct: 608 LINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 210/477 (44%), Gaps = 75/477 (15%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNVYT 112
           +S T L ++ +LH L++ SG  +  + S  L+  YAN    +  F+   F  I   NV+ 
Sbjct: 41  KSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFI 100

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV 169
           WN +I   +   +L +A+  + +  + +  RP+ +T+P + KAC   + + +G++IH  V
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRMVIDA--RPNKFTYPTLFKACSVAQAVQEGRQIHGHV 158

Query: 170 LKLGF------------------------------EWDVFVAASLLHMYCRFGLANVA-- 197
           +K G                               E DV    +++  Y + G+   A  
Sbjct: 159 VKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKG 218

Query: 198 -----------------------------RKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
                                        RKLFD+M  RD  SW++M+ GY  +G   EA
Sbjct: 219 LFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEA 278

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L+I  +M+ E        ++S+L  C+    I  G  +H Y+ ++ ++ +  +   L++M
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G +     VF++M ER++ +WN++I           A   F+ +Q+  ++P+ +TL
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKLGIINSACAVFEG 406
           V + +  A        + +  F   R ++  D  + +   +VD+  + G+ + A  +   
Sbjct: 399 VGVLTACAHAGFV--DKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINS 456

Query: 407 LPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +P+K +   W  L+     +G    A  V +++ E      N G YV +   Y+ VG
Sbjct: 457 MPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEP--QNSGRYVLLSNIYAKVG 511



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 26/350 (7%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D +  C  L   K L A + V    K + S   ++N  A  G+L  +R  FD +S R+  
Sbjct: 205 DGYLKCGVLEAAKGLFAQMPV----KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI 260

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VD-GKKIHCS 168
           +W+SM+  Y+  GR  EA++ F Q       RP  +    VL AC N+  +D G+ +H  
Sbjct: 261 SWSSMVDGYISAGRYKEALEIFQQMQREE-TRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           + +   + D  +  +LL MY + G  ++  ++F++M  R+  +WNAMI G    G A +A
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLIN 287
           L++  +++   +  + IT+  +L  CA +  +  GL I   + + +G++  L     +++
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVD 439

Query: 288 MYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-----I 341
           +  + G+   A  + + M M+ +   W +++ A          HG F   ++ G     +
Sbjct: 440 LLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA-------CRIHGNFDLAERVGKILLEL 492

Query: 342 QP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
           +P +    V L++I A++    +   +   +  RG      + G ++VD+
Sbjct: 493 EPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI---KTVPGVSIVDL 539


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/586 (39%), Positives = 347/586 (59%), Gaps = 2/586 (0%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           +R+E   +D  T+  +L +CA+  ++L G   H   +  GL  +    N LIN+Y K G 
Sbjct: 47  VRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQ 106

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
              A RVFD M  R ++SWN++IA Y  + + + A   F+ M + G Q    TL S    
Sbjct: 107 NDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCA 166

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A        + +H   ++         +G A +D+YAK  +I  AC VFE +P K  ++
Sbjct: 167 CAAKYAIIECKQLHTIAIKLA-LDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVT 225

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W++L  G+ QNGL  E + +FQ  +    +   + T  SIL   + +  + +G ++HA +
Sbjct: 226 WSSLFAGFVQNGLHEEVLCLFQSTQR-EGMQLTEFTVSSILSTCASLALIIEGTQVHAVI 284

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           +K+    ++FVAT LVD+Y KCG+I+ +  +F  +   + V WNA+I+    H    +A+
Sbjct: 285 VKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAM 344

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F +M   G+ P+ +T++S+L+ACSH+GLV EG+ YF+++  +   +P++ HY CMVD+
Sbjct: 345 ILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDV 404

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GR+G    A   +  MP  P AS+WG+LLG+ RIH N+ L  +A+++LF ++ EN G +
Sbjct: 405 LGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNH 464

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL+SN+YA  G WE V   R   RD G KK  G S IE   K+ +F  G R HP    +Y
Sbjct: 465 VLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVY 524

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
           ++L  +  +M+ + +  +    L DV  D+KE +L  HSE+LA AFG+IS PP  PI I+
Sbjct: 525 NKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIY 584

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLR+CGDCH++ K +S ITER++IVRD NRFHHFKDG CSCGD+W
Sbjct: 585 KNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 186/375 (49%), Gaps = 8/375 (2%)

Query: 52  DLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           +L Q C K   +   K  H L +  G +    +   L+N Y   G    +R  FD +S R
Sbjct: 61  ELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVR 120

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKI 165
           ++ +WN+MI+ Y       EA+  F +     G +   +T    L AC     +++ K++
Sbjct: 121 SIISWNTMIAGYTHNREDVEALKLFSRMH-REGTQMTEFTLSSTLCACAAKYAIIECKQL 179

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   +KL  +   FV  + L +Y +  +   A  +F++MP + S +W+++ +G+ Q+G  
Sbjct: 180 HTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLH 239

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            E L +    + EG+ +   TV+SIL  CA    I+ G  +H  IVKHG   NLFV+ +L
Sbjct: 240 EEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSL 299

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +++YAK G +  +  VF  M E++VV WN++IA++ +      A   F  MQQ GI P+ 
Sbjct: 300 VDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNE 359

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T +S+ S  +        R     ++       +V+  + +VD+  + G  + A  + +
Sbjct: 360 VTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLD 419

Query: 406 GLPVKDVIS-WNTLI 419
            +P +   S W +L+
Sbjct: 420 KMPFEPTASMWGSLL 434


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/650 (40%), Positives = 371/650 (57%), Gaps = 47/650 (7%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A  +F+ +P  +   WN M  G+  S + V AL +   M   G+  +  T   +L  CA+
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS---- 312
           S     G  IH +++K G + +L+V  +LI+MYA+ G +  A +VFD+   RDVVS    
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 313 ---------------------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
                                      WN++I+ Y ++ +   A   F  M +  ++PD 
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T+ ++ S  AQ       R VH +I   G F  ++ I NA++D+Y+K G + +AC + E
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHG-FGSNLKIVNALIDLYSKCGEVETACELLE 266

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           GL  KDVISWNTLI GY    L  EA+ +FQ M    E  PN  T +SILPA +H+GA+ 
Sbjct: 267 GLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAID 325

Query: 466 QGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSV-----P 516
            G  IH  + K      V  A    T L+DMY KCG ID A     QV  SS+       
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAP----QVSDSSAFNRSLST 381

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WNA+I    +HG+ + A + F +M   G+ PD ITFV LL+ACSHSG++  G+  F  M+
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +++ I P L+HYGCM+DL G +G    A   I  MP+ PD  IW +LL AC+IHGN+ELG
Sbjct: 442 QDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG 501

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL-KKTPGWSSIEVNN 695
              + +L +++ EN G YVL+SNIYA  GKW  V ++R+L  D+G+ KK PG SSIE+++
Sbjct: 502 ESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDS 561

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            V  F  G++ HP+  +IY  L  +   ++  G+VPD S VLQ++EE+ KE  L  HSE+
Sbjct: 562 VVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEK 621

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           LAIAFG+IS+ P + + I KNLRVC +CH  TK IS+I +REII RD  R
Sbjct: 622 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 257/510 (50%), Gaps = 51/510 (10%)

Query: 78  TVFSSTKLVNF---YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           T ++ ++L+ F     +   L ++   F+ I   N   WN M   +        A+   Y
Sbjct: 5   THYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALK-LY 63

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR- 190
              ++ GL P+F+TFP +LK+C   +   +G++IH  VLKLGF+ D++V  SL+ MY + 
Sbjct: 64  VVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQN 123

Query: 191 ------------------------------FGLANVARKLFDDMPVRDSGSWNAMISGYC 220
                                          G    A+K+FD++P++D  SWNAMISGY 
Sbjct: 124 GRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYA 183

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           ++GN  +AL++  EM    V  D  T+A+++  CA+S +I  G  +H +I  HG   NL 
Sbjct: 184 ETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLK 243

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           + N LI++Y+K G +  A  + + +  +DV+SWN++I  Y   N    A   F  M ++G
Sbjct: 244 IVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 303

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA------VVDMYAKL 394
             P+ +T++S+    A L      R +H +I ++   ++ V++ NA      ++DMYAK 
Sbjct: 304 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK---LKGVVVTNASSLRTSLIDMYAKC 360

Query: 395 GIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
           G I++A  V +       +S WN +I G+A +G A+ A ++F  M + N I P+  T+V 
Sbjct: 361 GDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRK-NGIEPDDITFVG 419

Query: 454 ILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-R 511
           +L A SH G L  G  I   + ++  +   +    C++D+ G  G   +A  +   +P  
Sbjct: 420 LLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME 479

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQML 541
              V W +++    IHG  +   +F ++++
Sbjct: 480 PDGVIWCSLLKACKIHGNLELGESFAKKLI 509



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 46/379 (12%)

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F  + +A+ VF+ + E + + WN +   +  S+DP++A   +  M   G+ P+  T   L
Sbjct: 22  FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFME------------------------------DV 381
               A+    +  + +HG +++ G+ ++                              DV
Sbjct: 82  LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           +   A++  YA  G I SA  +F+ +P+KDV+SWN +I+GYA+ G   +A+E+F+ M + 
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N + P++ T  +++ A +  G++  G ++H+ +  +    ++ +   L+D+Y KCG ++ 
Sbjct: 202 N-VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  L   +     + WN +I  +       +AL  F++ML  G  P+ +T +S+L AC+H
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 320

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHY---------GCMVDLFGRAGHLGMAHNFIQNMP 612
            G +  G R+ H+      I   LK             ++D++ + G +  A     +  
Sbjct: 321 LGAIDIG-RWIHVY-----IDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSA 374

Query: 613 VRPDASIWGALLGACRIHG 631
                S W A++    +HG
Sbjct: 375 FNRSLSTWNAMIFGFAMHG 393



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 195/406 (48%), Gaps = 18/406 (4%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G +  ++  FD I  ++V +WN+MIS Y   G   +A++ F + 
Sbjct: 139 RDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEM 198

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + ++PD  T   V+ AC    ++  G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 199 -MKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A +L + +  +D  SWN +I GY       EAL +  EM   G + + +T+ SILP 
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSN------NLINMYAKFGMMRHALRVFD-QMM 306
           CA    I  G  IH+YI K      + V+N      +LI+MYAK G +  A +V D    
Sbjct: 318 CAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAF 375

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            R + +WN++I  +        A   F+ M++ GI+PD +T V L S  +        R+
Sbjct: 376 NRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRN 435

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQN 425
           +   + +       +     ++D+    G+   A  +   +P++ D + W +L+     +
Sbjct: 436 IFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIH 495

Query: 426 GLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
           G   E  E F   ++  +I P N G+YV +   Y+  G   +  KI
Sbjct: 496 G-NLELGESFA--KKLIKIEPENPGSYVLLSNIYATAGKWNEVXKI 538


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/705 (35%), Positives = 396/705 (56%), Gaps = 32/705 (4%)

Query: 147 YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA-NVARKLFDDMP 205
           +T    L +  +L   K++H  +L+   +    +   L+   C    + + A  +F+ +P
Sbjct: 24  HTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIP 83

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
             ++   N  +    +S    + L + + MR +G+++D  +   +L   +R  +++ GL 
Sbjct: 84  KPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLE 143

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH    K G + + FV   L+ MYA  G +  A  +FD+M  RDVV+W+ +I  Y QS  
Sbjct: 144 IHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGL 203

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME------ 379
              A   F  M+   ++PD + L ++ S   +  +    + +H FIM     ++      
Sbjct: 204 FNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSA 263

Query: 380 ------------------------DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
                                   +++   A+V  Y+KLG I +A +VF  +  KD++ W
Sbjct: 264 LVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCW 323

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           + +I+GYA++    EA+ +F  M+    I P+Q T +S++ A +H+GAL Q   IH  V 
Sbjct: 324 SAMISGYAESDSPQEALNLFNEMQSLG-IKPDQVTMLSVITACAHLGALDQAKWIHLFVD 382

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           KN     + +   L++MY KCG ++ A  +F ++PR + + W  +IS   +HG    AL 
Sbjct: 383 KNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALR 442

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
           FF QM DE + P+ ITFV +L ACSH+GLV EG++ F+ M  E  I P   HYGCMVDLF
Sbjct: 443 FFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLF 502

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           GRA  L  A   ++ MP+ P+  IWG+L+ ACR+HG +ELG  A+ RL E+D ++ G +V
Sbjct: 503 GRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHV 562

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
            +SNIYA   +WE V +VR L + +G+ K  G S  E+NN++  F   +R+H   ++IY+
Sbjct: 563 FLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYE 622

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
           +L  + +K+K +GY P+   +L D+EE+EK+ ++  HSE+LA+ +G++     S I+I K
Sbjct: 623 KLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIK 682

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLRVC DCH + K  S++ EREI+VRD  RFHH+KDG+CSC DYW
Sbjct: 683 NLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/533 (31%), Positives = 276/533 (51%), Gaps = 42/533 (7%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD-LSFSRHTFDHISYRNVYT 112
             S T L H+K++HA ++ S   ++     KLV     L   L ++   F+ I     + 
Sbjct: 30  LSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHL 89

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSV 169
            N  +    R     E     Y+   T GL  D ++FPP+LKA    ++LV+G +IH   
Sbjct: 90  CNRFLRELSRSEE-PEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLA 148

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
            KLGF+ D FV   L+ MY   G    AR +FD M  RD  +W+ MI GYCQSG   +AL
Sbjct: 149 AKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDAL 208

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG--------------- 274
            + +EM+   V  D + ++++L  C R+ N+  G +IH +I+++                
Sbjct: 209 LLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMY 268

Query: 275 -------LEFNLF---------VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
                  L  NLF          S  ++  Y+K G + +A  VF+QM+++D+V W+++I+
Sbjct: 269 ASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMIS 328

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y +S+ P  A   F  MQ  GI+PD +T++S+ +  A L     ++ +H F+ + G F 
Sbjct: 329 GYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG-FG 387

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             + I NA+++MYAK G +  A  +F+ +P K+VISW  +I+ +A +G A  A+  F  M
Sbjct: 388 GALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQM 447

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA-TCLVDMYGKCG 497
           E+ N I PN  T+V +L A SH G + +G KI   +I         V   C+VD++G+  
Sbjct: 448 EDEN-IEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRAN 506

Query: 498 RIDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
            + +A+ L   +P + +V  W ++++   +HG+ +      +++L+  + PDH
Sbjct: 507 LLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLE--LDPDH 557


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/713 (36%), Positives = 386/713 (54%), Gaps = 72/713 (10%)

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            A SL+  +   G    A   FD +P   RD+   NAM+S + ++  A  A+ +   +  
Sbjct: 96  AATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLG 155

Query: 238 EG-VSMDPITVASILPVCARSDNILSG--LLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
            G +  D  +  +++    +  N+ +     +H  ++K G    L VSN LI +Y K   
Sbjct: 156 SGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDT 215

Query: 295 MR---HALRVFDQMMERDVVSW-------------------------------NSIIAAY 320
                 A +V D+M ++D ++W                               N++I+ Y
Sbjct: 216 PEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGY 275

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-RGWFME 379
            QS     A   F  M    +  D  T  S+ S  A      + +SVHG I+R +  F+ 
Sbjct: 276 VQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVP 335

Query: 380 DVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           +    + NA+V +Y+K G I  A  +F+ + +KDV+SWNT+++GY  +G   +A+EVF++
Sbjct: 336 EAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKV 395

Query: 438 MEECN------------------------------EINPNQGTYVSILPAYSHVGALRQG 467
           M   N                              ++ P   TY   + A   +GAL+ G
Sbjct: 396 MPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHG 455

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++HA +++            L+ MY KCG ++DA  +F  +P   SV WNA+IS  G H
Sbjct: 456 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 515

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +AL  F QM+ EG+ PD I+F+++LTAC+H+GLV EG  YF  M+ +FGI P   H
Sbjct: 516 GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDH 575

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y  ++DL GR+G +G A + I+ MP  P  SIW A+L  CR +G+ME GA A+D+LF + 
Sbjct: 576 YARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 635

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            ++ G Y+L+SN Y+  G+W     VR L RDRG+KK PG S IEV +K+ +F  G+  H
Sbjct: 636 PQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKH 695

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ +++Y  L  + A+M+ LGYVPD  FVL D+E  EKE+IL +HSE+LA+ FG++  PP
Sbjct: 696 PEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPP 755

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + + + KNLR+CGDCH    F+S+   REI+VRD  RFHHFKDG CSCG+YW
Sbjct: 756 GATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 186/676 (27%), Positives = 297/676 (43%), Gaps = 116/676 (17%)

Query: 14  CKLL--PLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLV 71
           C LL   L + H P  +  ++S   +  CL      +   DL  + +  H   RL  L  
Sbjct: 18  CSLLLRRLAERHSPAPTCPSSSFLRALRCLHAR---LLTADLLHAPSHPHLTLRLIHLYT 74

Query: 72  VSGKIKTV------------FSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMI 117
           +S  + T              ++T LV  +A  G L  +   FD +  + R+    N+M+
Sbjct: 75  LSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMM 134

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG--KKIHCSVLKL 172
           S + R    + AV  F+    +  LRPD Y+F  ++ A     NL      ++HCSVLK 
Sbjct: 135 SAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKS 194

Query: 173 GFEWDVFVAASLLHMYCRFGLANV---ARKLFDDMPVRDSGS------------------ 211
           G    + V+ +L+ +Y +         ARK+ D+MP +D  +                  
Sbjct: 195 GAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAAR 254

Query: 212 -------------WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
                        WNAMISGY QSG   +A ++   M  E V +D  T  S+L  CA + 
Sbjct: 255 SVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAG 314

Query: 259 NILSGLLIHLYIVKHGLEF----NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
             + G  +H  I++    F     L V+N L+ +Y+K G +  A R+FD M  +DVVSWN
Sbjct: 315 FFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWN 374

Query: 315 SIIAAYEQS----------------ND-------PITAHG--------FFTTMQQAGIQP 343
           +I++ Y  S                ND           HG         F  M+   ++P
Sbjct: 375 TILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKP 434

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
              T     +   +L   ++ R +H  +++ G F      GNA++ MYAK G +N A  V
Sbjct: 435 CDYTYAGAIAACGELGALKHGRQLHAHLVQCG-FEASNSAGNALLTMYAKCGAVNDARLV 493

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVG 462
           F  +P  D +SWN +I+   Q+G   EA+E+F QM+ E   I+P++ ++++IL A +H G
Sbjct: 494 FLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAE--GIDPDRISFLTILTACNHAG 551

Query: 463 ALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPW 517
            + +G      + ++   F +         L+D+ G+ GRI +A  L   +P   +   W
Sbjct: 552 LVDEGFHYFESMKRD---FGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 608

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVR--PDHI-TFVSLLTACSHSGLVSEGQRYFHM 574
            AI+S  G    GD  + F     D+  R  P H  T++ L    S +G   +  R   +
Sbjct: 609 EAILS--GCRTNGD--MEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKL 664

Query: 575 MQEEFGIKPHLKHYGC 590
           M++  G+K   K  GC
Sbjct: 665 MRDR-GVK---KEPGC 676


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/659 (37%), Positives = 376/659 (57%), Gaps = 45/659 (6%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYCQ 221
           ++H  VL+ G   D +V+ +LL  Y     +N   A K+F  +P  +   WN +I G  +
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    +A+     M ++    +  T  ++   C+ +  +  G  IH ++VKHG+  ++ +
Sbjct: 111 NNKLFKAIYFYGRMVIDARP-NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            +  I MYA FG +  A ++F    E DVV WN++I  Y +      A G F  M    I
Sbjct: 170 KSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
                                             W        N +++  AK G +  A 
Sbjct: 229 G--------------------------------SW--------NVMINGLAKGGNLGDAR 248

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            +F+ +  +D ISW++++ GY   G   EA+E+FQ M+   E  P +    S+L A S++
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR-EETRPGRFILSSVLAACSNI 307

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GA+ QG  +HA + +N +  D  + T L+DMY KCGR+D    +F ++       WNA+I
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
               IHG+ + AL  F ++ +  ++P+ IT V +LTAC+H+G V +G R F  M+E +G+
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P L+HYGCMVDL GR+G    A + I +MP++P+A++WGALLGACRIHGN +L      
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGK 487

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L E++ +N G YVL+SNIYA VG+++ V ++R L ++RG+K  PG S +++N  V  F 
Sbjct: 488 ILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFK 547

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+ +HP+ ++IY +L+ +  +++  G+ PD S VL D++E+EKE  +  HSE+LAIAFG
Sbjct: 548 MGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFG 607

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I++ P   I I KNLRVC DCH+ TK ISQI +REIIVRD  R+HHFK+G CSC D+W
Sbjct: 608 LINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 218/492 (44%), Gaps = 76/492 (15%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNVYT 112
           +S T L ++ +LHAL++ SG  +  + S  L+  YAN    +  F+   F  I   NV+ 
Sbjct: 41  KSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFI 100

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV 169
           WN +I   +   +L +A+  + +  + +  RP+ +T+P + KAC   + + +G++IH  V
Sbjct: 101 WNIVIKGCLENNKLFKAIYFYGRMVIDA--RPNKFTYPTLFKACSVAQAVQEGRQIHGHV 158

Query: 170 LKLGF------------------------------EWDVFVAASLLHMYCRFGLANVA-- 197
           +K G                               E DV    +++  Y + G+   A  
Sbjct: 159 VKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKG 218

Query: 198 -----------------------------RKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
                                        RKLFD+M  RD  SW++M+ GY  +G   EA
Sbjct: 219 LFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEA 278

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L+I  +M+ E        ++S+L  C+    I  G  +H Y+ ++ ++ +  +   L++M
Sbjct: 279 LEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G +     VF++M ER++ +WN++I           A   F+ +Q+  ++P+ +TL
Sbjct: 339 YAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITL 398

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKLGIINSACAVFEG 406
           V + +  A        + +  F   R ++  D  + +   +VD+  + G+ + A  +   
Sbjct: 399 VGVLTACAHAGFV--DKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINS 456

Query: 407 LPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +P+K +   W  L+     +G    A  V +++ E      N G YV +   Y+ VG   
Sbjct: 457 MPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEP--QNSGRYVLLSNIYAKVGRFD 514

Query: 466 QGIKIHARVIKN 477
              KI  +++KN
Sbjct: 515 DVSKIR-KLMKN 525



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 26/350 (7%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D +  C  L   K L A + V    K + S   ++N  A  G+L  +R  FD +S R+  
Sbjct: 205 DGYLKCGVLEAAKGLFAQMPV----KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI 260

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VD-GKKIHCS 168
           +W+SM+  Y+  GR  EA++ F Q       RP  +    VL AC N+  +D G+ +H  
Sbjct: 261 SWSSMVDGYISAGRYKEALEIFQQMQREE-TRPGRFILSSVLAACSNIGAIDQGRWVHAY 319

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           + +   + D  +  +LL MY + G  ++  ++F++M  R+  +WNAMI G    G A +A
Sbjct: 320 LKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDA 379

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLIN 287
           L++  +++   +  + IT+  +L  CA +  +  GL I   + + +G++  L     +++
Sbjct: 380 LELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVD 439

Query: 288 MYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-----I 341
           +  + G+   A  + + M M+ +   W +++ A          HG F   ++ G     +
Sbjct: 440 LLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA-------CRIHGNFDLAERVGKILLEL 492

Query: 342 QP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
           +P +    V L++I A++    +   +   +  RG      + G ++VD+
Sbjct: 493 EPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI---KTVPGVSIVDL 539


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/680 (37%), Positives = 378/680 (55%), Gaps = 42/680 (6%)

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG---NAVEALD 230
           F W+     +LL  Y + GL +     F+ +P RD  +WN +I GY  SG    AV+A +
Sbjct: 73  FSWN-----NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN 127

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
            +  MR    ++  +T+ ++L + + + ++  G  IH  ++K G E  L V + L+ MYA
Sbjct: 128 TM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185

Query: 291 KFGMMRHALRVFDQM------------------------------MERDVVSWNSIIAAY 320
             G +  A +VF  +                              ME+D VSW ++I   
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q+     A   F  M+  G++ D     S+      L      + +H  I+R   F + 
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDH 304

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           + +G+A++DMY K   ++ A  VF+ +  K+V+SW  ++ GY Q G A EA+++F  M+ 
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              I+P+  T    + A ++V +L +G + H + I + L   V V+  LV +YGKCG ID
Sbjct: 365 SG-IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           D+  LF ++    +V W A++S +   G+  + +  F +M+  G++PD +T   +++ACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
            +GLV +GQRYF +M  E+GI P + HY CM+DLF R+G L  A  FI  MP  PDA  W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
             LL ACR  GN+E+G  A++ L E+D  +   Y L+S+IYA+ GKW+ V ++R   R++
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
            +KK PG S I+   K+  F   + + P  ++IY +L  L  K+   GY PD SFV  DV
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           EE  K  +L  HSERLAIAFG+I  P   PI++ KNLRVC DCHN TK IS +T REI+V
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD+ RFH FKDG CSCGD+W
Sbjct: 724 RDAVRFHRFKDGTCSCGDFW 743



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 245/527 (46%), Gaps = 68/527 (12%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           +VK +H  ++ +      F    +V+ YA +   +++R  FD I   N+++WN+++  Y 
Sbjct: 24  YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83

Query: 122 RCGRLSEAVDCFYQFTLTSGL----------------------------------RPDFY 147
           + G +SE    F +     G+                                  R    
Sbjct: 84  KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143

Query: 148 TFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF---DDM 204
           T   +  +  ++  GK+IH  V+KLGFE  + V + LL+MY   G  + A+K+F   DD 
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203

Query: 205 PV---------------------------RDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
                                        +DS SW AMI G  Q+G A EA++   EM++
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
           +G+ MD     S+LP C     I  G  IH  I++   + +++V + LI+MY K   + +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A  VFD+M +++VVSW +++  Y Q+     A   F  MQ++GI PD  TL    S  A 
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           ++        HG  +  G  +  V + N++V +Y K G I+ +  +F  + V+D +SW  
Sbjct: 384 VSSLEEGSQFHGKAITSG-LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +++ YAQ G A E I++F  M + + + P+  T   ++ A S  G + +G +    +   
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501

Query: 478 -CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
             +   +   +C++D++ + GR+++AM     +P    ++ W  ++S
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 208/444 (46%), Gaps = 39/444 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H  ++  G    +   + L+  YAN+G +S ++  F  +  RN   +NS++   + C
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218

Query: 124 GRLS------------------------------EAVDCFYQFTLTSGLRPDFYTFPPVL 153
           G +                               EA++CF +  +  GL+ D Y F  VL
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV-QGLKMDQYPFGSVL 277

Query: 154 KACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
            AC  L    +GK+IH  +++  F+  ++V ++L+ MYC+    + A+ +FD M  ++  
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SW AM+ GY Q+G A EA+ I  +M+  G+  D  T+   +  CA   ++  G   H   
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  GL   + VSN+L+ +Y K G +  + R+F++M  RD VSW ++++AY Q    +   
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M Q G++PD +TL  + S  ++       +     +      +  +   + ++D+
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517

Query: 391 YAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +++ G +  A     G+P   D I W TL++     G         + + E +  +P   
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577

Query: 450 TYVSILPA----YSHVGALRQGIK 469
           T +S + A    +  V  LR+G++
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMR 601



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 39/399 (9%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA-HGFFTTM 336
           NLF  NNL+  Y+K G++      F+++ +RD V+WN +I  Y  S     A   + T M
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           +        +TL+++  + +        + +HG +++ G F   +++G+ ++ MYA +G 
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYANVGC 189

Query: 397 INSACAVFEGLP------------------------------VKDVISWNTLITGYAQNG 426
           I+ A  VF GL                                KD +SW  +I G AQNG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           LA EAIE F+ M +   +  +Q  + S+LPA   +GA+ +G +IHA +I+      ++V 
Sbjct: 250 LAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + L+DMY KC  +  A ++F ++ + + V W A++  +G  G+ ++A+  F  M   G+ 
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           PDH T    ++AC++   + EG + FH      G+  ++     +V L+G+ G +  +  
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
               M VR DA  W A++ A    G     AV + +LF+
Sbjct: 428 LFNEMNVR-DAVSWTAMVSAYAQFGR----AVETIQLFD 461



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 66/328 (20%)

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           N  R  + +HG I+R   + E  +  N +V  YA +     A  VF+ +P  ++ SWN L
Sbjct: 20  NQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALMKSSTYARRVFDRIPQPNLFSWNNL 78

Query: 419 ITGYAQNGLASE-------------------------------AIEVFQMMEECNEINPN 447
           +  Y++ GL SE                               A++ +  M      N  
Sbjct: 79  LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK------------ 495
           + T +++L   S  G +  G +IH +VIK      + V + L+ MY              
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198

Query: 496 -------------------CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
                              CG I+DA+ LF  + +  SV W A+I     +G   +A+  
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIEC 257

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           FR+M  +G++ D   F S+L AC   G ++EG++  H        + H+     ++D++ 
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ-IHACIIRTNFQDHIYVGSALIDMYC 316

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALL 624
           +   L  A      M  +   S W A++
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVS-WTAMV 343



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L    + H   + SG I  V  S  LV  Y   GD+  S   F+ ++ R+  +W +M+
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKKIHCSVL--KLG 173
           S Y + GR  E +  F +  +  GL+PD  T   V+ AC    LV+  + +  ++  + G
Sbjct: 445 SAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQSGN------AV 226
               +   + ++ ++ R G    A +  + MP   D+  W  ++S     GN      A 
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563

Query: 227 EALDILDEMRLEGVSM 242
           E+L  LD     G ++
Sbjct: 564 ESLIELDPHHPAGYTL 579


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/578 (40%), Positives = 363/578 (62%), Gaps = 13/578 (2%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGL-----EFNLFVSNNLINMYAKFGMMRHALRVFD 303
           S++ +C  S + L    IH + ++HG+     +FN  +   L+++ A    M  A ++F+
Sbjct: 39  SLVQLCGSSQSKLKQ--IHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFN 93

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCR 362
           Q+   ++ +WN++I  + +S +P  A   F+ M  A  I PD  T   L   VA+L D  
Sbjct: 94  QIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVS 153

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               +H  ++R G F     + N++V MY+ LG + SA  VFE +  +D ++WN++I G+
Sbjct: 154 LGEGIHSVVVRNG-FDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGF 212

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           A NG+ +EA+ +++ M     + P+  T VS+L A   +GAL  G ++H  ++K  L  +
Sbjct: 213 ALNGMPNEALTLYREMGS-EGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQN 271

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
              +  L+D+Y KCG   DA  +F ++   S V W ++I    ++G G++AL  F ++  
Sbjct: 272 QHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELER 331

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           +G++P  ITFV +L ACSH G++ EG  YF  M+EE+GI P ++H+GCMVDL  RAG +G
Sbjct: 332 QGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVG 391

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+++I+NMPV P+A IW  LLGAC IHG++ELG VA   +  ++  + G +VL+SN+YA
Sbjct: 392 DAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYA 451

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
           +  +W  V  VR +   +G+KKTPG+S +E+ N+V  F  G+R+HP+ E+ Y  L  +T 
Sbjct: 452 SERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQ 511

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
            +K  GYVP    VL D+EE+EKE  L+ H+E++AIAF ++++PP +PI+I KNLRVC D
Sbjct: 512 LLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCAD 571

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH   K IS++ EREIIVRD +RFHHFKDG CSC DYW
Sbjct: 572 CHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 172/343 (50%), Gaps = 18/343 (5%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +SF+   F+ I   N++TWN+MI  +      S AV+ F Q    S + PD +TFP + K
Sbjct: 85  MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFK 144

Query: 155 ACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           A   L+D   G+ IH  V++ GF+   FV  SL+HMY   G    A ++F+ M  RD  +
Sbjct: 145 AVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVA 204

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN++I+G+  +G   EAL +  EM  EGV  D  T+ S+L  C     +  G  +H+Y+V
Sbjct: 205 WNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMV 264

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K GL  N   SN L+++Y+K G  R A +VFD+M ER VVSW S+I     +     A  
Sbjct: 265 KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALK 324

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQ-------LNDCRNSRSVHGFIMRRGWFMEDVIIG 384
            F  +++ G++P  +T V +    +         N  R  +  +G + R       +   
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR-------IEHH 377

Query: 385 NAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNG 426
             +VD+  + G +  A      +PV  + + W TL+     +G
Sbjct: 378 GCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 14/236 (5%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSS 82
           LFS    +  I PD          F  LF++  KL  V   + +H+++V +G     F  
Sbjct: 122 LFSQMHAASSILPDTH-------TFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQ 174

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
             LV+ Y+ LG L  +   F+ +SYR+   WNS+I+ +   G  +EA+  + +   + G+
Sbjct: 175 NSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMG-SEGV 233

Query: 143 RPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
            PD +T   +L AC     L  G+++H  ++K+G   +   + +LL +Y + G    A+K
Sbjct: 234 EPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQK 293

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           +FD+M  R   SW ++I G   +G   EAL +  E+  +G+    IT   +L  C+
Sbjct: 294 VFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/634 (37%), Positives = 361/634 (56%), Gaps = 3/634 (0%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY +  L N A+ L    P R   +W A+ISG  Q+G    AL    +MR E +  +  T
Sbjct: 1   MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
                          +G  IH   +K G   + FV  +  +MY+K G+   A R+FD+M 
Sbjct: 61  FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            R+V  WN+ I+       P  A   F   ++ G +PDL+T  +  +  A        R 
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG ++R G F  DV + N ++D+Y K   +  A  VF G+  ++ +SW T++    QN 
Sbjct: 181 LHGLVIRSG-FEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              +A  VF +M     I        S++ AY+ +  L  G  +HA  +K C+  D+FV 
Sbjct: 240 EKEKACVVF-LMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVG 298

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + LVDMYGKCG I+D   +F+++P  + V WNA+IS +   G  D A+  F +M  E V 
Sbjct: 299 SALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV- 357

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
            +++T + +L+ACS  G V  G   F  M++ + I+P  +HY C+ D+ GRAG +  A+ 
Sbjct: 358 ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYE 417

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
           F+Q MP+RP  S+WGALL ACR++G  ELG +A+D LF++D ++ G +VL+SN++A  G+
Sbjct: 418 FVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGR 477

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+    VR   +D G+KK  G S +   NKV +F   + +H +  +I   L  L  +M++
Sbjct: 478 WDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQA 537

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GY+PD ++ L D+EE+EK   +  HSE++A+AFG+I+ PP  PI+I KNLR+CGDCH+ 
Sbjct: 538 AGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSA 597

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KFIS I  REIIVRD+NRFH F+D  CSC D+W
Sbjct: 598 FKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 233/465 (50%), Gaps = 25/465 (5%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKK 164
           R V TW ++IS  V+ G  S A+  ++       ++P+ +TFP   KA   L     GK+
Sbjct: 21  RCVVTWTALISGSVQNGYFSSAL-LYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQ 79

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           IH   LKLG   D FV  S   MY + GL   A++LFD+MP R+   WNA IS     G 
Sbjct: 80  IHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGR 139

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             +A+D   E R  G   D IT  + L  CA +  +  G  +H  +++ G E ++ V+N 
Sbjct: 140 PGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANG 199

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           +I++Y K   +  A  VF+ M  R+ VSW +++AA EQ+++   A   F   ++ GI+  
Sbjct: 200 IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT 259

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
              + S+ S  A ++     RSVH   + +     D+ +G+A+VDMY K G I     VF
Sbjct: 260 DYMVSSVISAYAGISGLEFGRSVHALAV-KACVEGDIFVGSALVDMYGKCGSIEDCEQVF 318

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P ++++SWN +I+GYA  G    A+ +F+ M+  +E   N  T + +L A S  GA+
Sbjct: 319 HEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQ--SEAVANYVTLICVLSACSRGGAV 376

Query: 465 RQGIKIHA------RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPW 517
           + G +I        R+      +      C+ DM G+ G ++ A     ++P R +   W
Sbjct: 377 KLGNEIFESMRDRYRIEPGAEHY-----ACIADMLGRAGMVERAYEFVQKMPIRPTISVW 431

Query: 518 NAIISCHGIHGQGD----KALNFFRQMLDEGVRPDHITFVSLLTA 558
            A+++   ++G+ +     A N F+  LD     +H+   ++  A
Sbjct: 432 GALLNACRVYGEPELGKIAADNLFK--LDPKDSGNHVLLSNMFAA 474



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 174/362 (48%), Gaps = 6/362 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++HA+ +  G+I   F      + Y+  G    ++  FD +  RNV  WN+ IS  V  
Sbjct: 78  KQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLD 137

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
           GR  +A+D F +F    G  PD  TF   L AC   R L  G+++H  V++ GFE DV V
Sbjct: 138 GRPGKAIDKFIEFRRVGG-EPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSV 196

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           A  ++ +Y +     +A  +F+ M  R+S SW  M++   Q+    +A  +    R EG+
Sbjct: 197 ANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGI 256

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +    V+S++   A    +  G  +H   VK  +E ++FV + L++MY K G +    +
Sbjct: 257 ELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQ 316

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF +M ER++VSWN++I+ Y    D   A   F  MQ   +  + +TL+ + S  ++   
Sbjct: 317 VFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRGGA 375

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
            +    +   +  R            + DM  + G++  A    + +P++  IS W  L+
Sbjct: 376 VKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALL 435

Query: 420 TG 421
             
Sbjct: 436 NA 437


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/713 (35%), Positives = 400/713 (56%), Gaps = 46/713 (6%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVL 170
           ++++S   + G+++ A+D      L      D      V+++C  L    +G++IH  + 
Sbjct: 7   STLLSKRQQLGQIAAAID-----ALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMR 61

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           ++G   DV+V+  L+ MY + G    AR +F+  P ++  SW  +I+   Q G + EAL 
Sbjct: 62  RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALA 121

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNIL-SGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +  EM  +G+    ++  + +  C+     L +G  +H  + ++G +  +  + +L++MY
Sbjct: 122 LFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMY 181

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  ++R F+ M E + VSWN++IAA+ +    + A      M   GI+       
Sbjct: 182 SKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRA------ 235

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                                         DV++G  +V+MYAK   ++ A A F  L  
Sbjct: 236 ----------------------------CSDVVVGTTLVNMYAKCSGLHDANAAFVKLQE 267

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            ++I+WN LI+ Y Q+    EA+E+F+ M     +  ++ T+++IL A     AL  G  
Sbjct: 268 PNIITWNVLISAYVQHCCFKEAMELFRRMLLLG-LEMDEVTFINILGACCVPVALEDGRA 326

Query: 470 IHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           IHA V ++ L  +   +   +++MYGKCG + DA ++F  + +   + WN +I+ +G HG
Sbjct: 327 IHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHG 386

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTA-CSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
              +AL F+  M +EGV PD  T+VS++ A C+++GL  E   YF  MQ++ G++P   H
Sbjct: 387 HTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGH 446

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           YGCMV+  G+AG L  A   IQ MP  PD   W + L  CR HG+M+ G +A+     +D
Sbjct: 447 YGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRID 506

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            E    YV ++ I+A+ G ++    +R L  DRG++K  G S I++   V  F  G++++
Sbjct: 507 PEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSN 566

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ ++I+DEL+ L  +MKS GY PD + V  DVE  +KE +L +HSERLAIAFGIIS+ P
Sbjct: 567 PRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSP 626

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +P++I KNLRVCGDCH  TK  S+IT REIIVRDSNRFHHFK+G CSC D+W
Sbjct: 627 GTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 679



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 241/530 (45%), Gaps = 55/530 (10%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLH 67
           RRL  LL   Q      +AA ++LQ   D    E   +      QSC +L  +   +R+H
Sbjct: 4   RRLSTLLSKRQ-QLGQIAAAIDALQKRKDADLKECVRV-----IQSCARLGALAEGRRIH 57

Query: 68  ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLS 127
            L+   G    V+ S  LV  Y   G L  +R  F+    +NV++W  +I+V  + GR  
Sbjct: 58  QLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQ 117

Query: 128 EAVDCFYQFTLTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFVAAS 183
           EA+  FY+  L  G++P   +F   + AC      L  G+ +H  + + GF+  V    S
Sbjct: 118 EALALFYEM-LKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTS 176

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+ MY + G    + + F+ M   ++ SWNAMI+ + +    +EAL  L +M LEG+   
Sbjct: 177 LVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIR-- 234

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
                     C+                      ++ V   L+NMYAK   +  A   F 
Sbjct: 235 ---------ACS----------------------DVVVGTTLVNMYAKCSGLHDANAAFV 263

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           ++ E ++++WN +I+AY Q      A   F  M   G++ D +T +++           +
Sbjct: 264 KLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALED 323

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R++H  +           + N +++MY K G +  A A+F+ +   DVI+WNT+I  Y 
Sbjct: 324 GRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYG 383

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q+G  SEA+  +++M+E   + P+  TYVS++ A      L +  + HA  +       V
Sbjct: 384 QHGHTSEALRFYELMQE-EGVVPDDYTYVSVIDASCANAGLPE--EAHAYFVSMQQDHGV 440

Query: 484 FVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHG 528
                   C+V+  GK GR+ DA +L   +P    V  W + ++    HG
Sbjct: 441 RPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHG 490


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/735 (33%), Positives = 395/735 (53%), Gaps = 73/735 (9%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRDSGSWNA 214
           +L   ++ H  +L+L    D  +  SLL  Y          ++  L   +P     S+++
Sbjct: 15  SLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +I  + +S +    L     +    +  D   + S +  CA    +  G  +H +    G
Sbjct: 75  LIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASG 134

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
              +  V+++L +MY K   +  A ++FD+M +RDVV W+++IA Y +      A   F 
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194

Query: 335 TMQQAGIQPDLL-----------------------------------TLVSLTSIVAQLN 359
            M+  G++P+L+                                   T+  +   V  L 
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           D      VHG+++++G    D  + +A++DMY K G +     VF+ +   ++ S N  +
Sbjct: 255 DVVVGAQVHGYVIKQG-LGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313

Query: 420 TGYAQNGLASEAIEVF-----QMME-----------ECNE------------------IN 445
           TG ++NG+   A+EVF     Q ME            C++                  + 
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE 373

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN  T  S++PA  ++ AL  G +IH   ++  +  DV+V + L+DMY KCGRI  A   
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++   + V WNA++  + +HG+  + +  F  ML  G +PD +TF  +L+AC+ +GL 
Sbjct: 434 FDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLT 493

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG R ++ M EE GI+P ++HY C+V L  R G L  A++ I+ MP  PDA +WGALL 
Sbjct: 494 EEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           +CR+H N+ LG +A+++LF ++  N G Y+L+SNIYA+ G W+  + +R + + +GL+K 
Sbjct: 554 SCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKN 613

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PG+S IEV +KV +   G+++HP+ + I ++L  L  +MK  GY+P  +FVLQDVEE +K
Sbjct: 614 PGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDK 673

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           E IL  HSE+LA+  G++++ P  P+Q+ KNLR+C DCH   K IS++  REI VRD+NR
Sbjct: 674 EQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNR 733

Query: 806 FHHFKDGICSCGDYW 820
           FHHFKDG+CSCGD+W
Sbjct: 734 FHHFKDGVCSCGDFW 748



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 260/553 (47%), Gaps = 81/553 (14%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF---DHISYRN 109
           L  S   L   ++ HAL++          +T L++FYAN   LS  + +     H+ +  
Sbjct: 9   LSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPT 68

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +++++S+I  + R       +  F        L PD +  P  +K+C   R L  G+++H
Sbjct: 69  LFSFSSLIHAFARSHHFPHVLTTFSHLHPLR-LIPDAFLLPSAIKSCASLRALDPGQQLH 127

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD------------------ 208
                 GF  D  VA+SL HMY +      ARKLFD MP RD                  
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187

Query: 209 ----------SG-------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
                     SG       SWN M++G+  +G   EA+ +   M ++G   D  TV+ +L
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVL 247

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF--------- 302
           P     ++++ G  +H Y++K GL  + FV + +++MY K G ++   RVF         
Sbjct: 248 PAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIG 307

Query: 303 --------------------------DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
                                     DQ ME +VV+W SIIA+  Q+   + A   F  M
Sbjct: 308 SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  G++P+ +T+ SL      ++   + + +H F +RRG F +DV +G+A++DMYAK G 
Sbjct: 368 QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIF-DDVYVGSALIDMYAKCGR 426

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I  A   F+ +   +++SWN ++ GYA +G A E +E+F MM +  +  P+  T+  +L 
Sbjct: 427 IQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ-KPDLVTFTCVLS 485

Query: 457 AYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
           A +  G   +G + +  +  ++ +   +    CLV +  + G++++A S+  ++P    +
Sbjct: 486 ACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDA 545

Query: 515 VPWNAIISCHGIH 527
             W A++S   +H
Sbjct: 546 CVWGALLSSCRVH 558



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA---KLGIINSACAVFEGL 407
           L+S  A L+    +R  H  I+R   F  D  +  +++  YA    L     +  +   L
Sbjct: 9   LSSSTASLS---QARQAHALILRLNLF-SDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P   + S+++LI  +A++      +  F  +     I P+     S + + + + AL  G
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLI-PDAFLLPSAIKSCASLRALDPG 123

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++HA    +    D  VA+ L  MY KC RI DA  LF ++P    V W+A+I+ +   
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G  ++A   F +M   GV P+ +++  +L    ++G   E    F MM  + G  P    
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGST 242

Query: 588 YGCMVDLFG 596
             C++   G
Sbjct: 243 VSCVLPAVG 251



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 10/199 (5%)

Query: 44  ESREIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E   +    L  +C   + L H K +H   +  G    V+  + L++ YA  G +  +R 
Sbjct: 373 EPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARR 432

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-- 158
            FD +S  N+ +WN+++  Y   G+  E ++ F+   L SG +PD  TF  VL AC    
Sbjct: 433 CFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMM-LQSGQKPDLVTFTCVLSACAQNG 491

Query: 159 -LVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAM 215
              +G + + S+ +  G E  +   A L+ +  R G    A  +  +MP   D+  W A+
Sbjct: 492 LTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGAL 551

Query: 216 ISGYCQSGNAVEALDILDE 234
           +S  C+  N +   +I  E
Sbjct: 552 LSS-CRVHNNLSLGEIAAE 569


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/736 (33%), Positives = 418/736 (56%), Gaps = 58/736 (7%)

Query: 141  GLRPDFYTFPPV-LKACR----NLVDGK----KIHCSVLKLGFEWDVFVAASLLHMYCRF 191
            G     Y +PP+ L++C      + +G      +H   +K G    +  A  LL +Y + 
Sbjct: 278  GFSVSSYFYPPLWLQSCSLFHSTISNGPPPLGTLHALSVKNGSLQTLNSANYLLTLYVKS 337

Query: 192  GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
               + ARKLFD++P R++ +W  +ISG+ ++G++     +  EMR +G   +  T++S+ 
Sbjct: 338  SNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLF 397

Query: 252  PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
              C+   N+  G  +H +++++G++ ++ + N+++++Y K  +  +A RVF+ M E DVV
Sbjct: 398  KCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVV 457

Query: 312  SWNSIIAAYEQSNDPITAHGFFT-------------------------------TMQQAG 340
            SWN +I+AY ++ D   +   F                                 M + G
Sbjct: 458  SWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECG 517

Query: 341  IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             +  ++T      + + L+     R +HG +++ G F  D  I +++V+MY K G +++A
Sbjct: 518  TEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFG-FCRDGFIRSSLVEMYCKCGRMDNA 576

Query: 401  CAVFEGLPV----------------KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
              V + +P+                  ++SW  +++GY  NG   + ++ F++M     +
Sbjct: 577  SIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVR-ELV 635

Query: 445  NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
              +  T  +I+ A ++ G L  G  +HA   K     D +V + L+DMY K G +DDA +
Sbjct: 636  VVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWT 695

Query: 505  LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
            +F Q    + V W ++IS   +HGQG +A+  F +ML++G+ P+ +TF+ +L AC H+GL
Sbjct: 696  IFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGL 755

Query: 565  VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            + EG RYF MM++ + I P ++H   MVDL+GRAGHL    NFI    +    S+W + L
Sbjct: 756  LEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFL 815

Query: 625  GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
             +CR+H N+E+G   S+ L +V   + G YVL+SN+ A+  +W+    VRSL   RG+KK
Sbjct: 816  SSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGIKK 875

Query: 685  TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
             PG S I++ +++  F  G+R+HP+ E+IY  L  L  ++K +GY  D   V+QDVEE++
Sbjct: 876  QPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQ 935

Query: 745  KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
             E +++ HSE+LA+ FGII++  ++PI+I KNLR+C DCHN+ K+ SQ+ +REII+RD +
Sbjct: 936  GEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIILRDIH 995

Query: 805  RFHHFKDGICSCGDYW 820
            RFHHFK G CSCGDYW
Sbjct: 996  RFHHFKHGGCSCGDYW 1011



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 147/593 (24%), Positives = 267/593 (45%), Gaps = 69/593 (11%)

Query: 54  FQSCTKLHH--------VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
            QSC+  H         +  LHAL V +G ++T+ S+  L+  Y    ++  +R  FD I
Sbjct: 291 LQSCSLFHSTISNGPPPLGTLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEI 350

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDG 162
             RN  TW  +IS + R G  SE V   ++     G  P+ YT   + K C    NL  G
Sbjct: 351 PQRNTQTWTILISGFSRAGS-SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLG 409

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K +H  +L+ G + DV +  S+L +Y +  +   A ++F+ M   D  SWN MIS Y ++
Sbjct: 410 KGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRA 469

Query: 223 GNAVEALD---------------ILDEMRLEGVSMDPITVASILPVCARSDNILS----- 262
           G+  ++LD               I+D +   G     +     +  C    ++++     
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIAL 529

Query: 263 -----------GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM------ 305
                      G  +H  ++K G   + F+ ++L+ MY K G M +A  V   +      
Sbjct: 530 ILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLK 589

Query: 306 ----------MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
                     ++  +VSW  +++ Y  +         F  M +  +  D+ T+ ++ S  
Sbjct: 590 NGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC 649

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A        R VH +  + G  + D  +G++++DMY+K G ++ A  +F      +++ W
Sbjct: 650 ANAGILEFGRHVHAYNHKIGHRI-DAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFW 708

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            ++I+G A +G   +AI +F+ M     I PN+ T++ +L A  H G L +G + + R++
Sbjct: 709 TSMISGCALHGQGKQAICLFEEMLN-QGIIPNEVTFLGVLNACCHAGLLEEGCR-YFRMM 766

Query: 476 KNCLCFDVFVATC--LVDMYGKCGRIDDAMSLFYQ--VPRSSSVPWNAIISCHGIHGQGD 531
           K+  C +  V  C  +VD+YG+ G + +  +  ++  +   +SV W + +S   +H   +
Sbjct: 767 KDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSV-WKSFLSSCRLHKNVE 825

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
               +  +ML +    D   +V L   C+ +    E  R   +M +  GIK  
Sbjct: 826 MG-KWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQR-GIKKQ 876



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 171/378 (45%), Gaps = 54/378 (14%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           DL+  C    + +R+  L+        V S   +++ Y   GD+  S   F  + Y++V 
Sbjct: 433 DLYLKCKVFEYAERVFELM----NEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVV 488

Query: 112 TWNSMISVYVRCGRLSEA-------VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           +WN+++   ++ G   +A       V+C  +F++ +     F     +  +   +  G++
Sbjct: 489 SWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVT-----FSIALILSSSLSLVELGRQ 543

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-----DSG--------- 210
           +H  VLK GF  D F+ +SL+ MYC+ G  + A  +  D+P+      ++G         
Sbjct: 544 LHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAG 603

Query: 211 --SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW  M+SGY  +G   + L     M  E V +D  TV +I+  CA +  +  G  +H 
Sbjct: 604 IVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHA 663

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           Y  K G   + +V ++LI+MY+K G +  A  +F Q  E ++V W S+I+          
Sbjct: 664 YNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQ 723

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG--WF--MEDVIIG 384
           A   F  M   GI P+ +T + +      LN C      H  ++  G  +F  M+D    
Sbjct: 724 AICLFEEMLNQGIIPNEVTFLGV------LNAC-----CHAGLLEEGCRYFRMMKDAYCI 772

Query: 385 N-------AVVDMYAKLG 395
           N       ++VD+Y + G
Sbjct: 773 NPGVEHCTSMVDLYGRAG 790


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 264/727 (36%), Positives = 403/727 (55%), Gaps = 74/727 (10%)

Query: 165 IHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFD--------------------- 202
           +HC VL+ L      +V   LL  Y R G   +AR+LFD                     
Sbjct: 31  VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90

Query: 203 ----------DMPVRDSGSWNAMISGYCQSGNAVEALD-----ILDEMRLEGVSMDP--I 245
                      MP RD+ S+NA+I+G+  +G    A       + +E  ++G  + P  I
Sbjct: 91  LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150

Query: 246 TVAS-ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           T++  ++   A  D  L G  +H  I++ G     F  + L++MYAK G++  A RVFD+
Sbjct: 151 TMSGMVMAASALGDRAL-GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDE 209

Query: 305 -------------------------------MMERDVVSWNSIIAAYEQSNDPITAHGFF 333
                                          M++RD ++W +++    Q+     A   F
Sbjct: 210 MVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVF 269

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M+  G+  D  T  S+ +    L      + +H + +R   +  ++ +G+A+VDMY+K
Sbjct: 270 RRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRT-LYDGNIFVGSALVDMYSK 328

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
              I  A AVF  +  K++ISW  +I GY QNG   EA+ VF  M+  + I PN  T  S
Sbjct: 329 CRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQT-DGIKPNDFTLGS 387

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           ++ + +++ +L +G + H   + + L   + V++ LV +YGKCG I+DA  LF ++P   
Sbjct: 388 VISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHD 447

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V + A++S +   G+  + ++ F +ML +GV+P+ +TF+ +L+ACS SGLV +G  YFH
Sbjct: 448 QVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFH 507

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            MQ++ GI     HY CM+DL+ R+G L  A  FI+ MP  PDA  W  LL ACR+ G+M
Sbjct: 508 SMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDM 567

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           E+G  A++ L + D +N   YVL+ +++A+ G+W  V  +R   RDR +KK PG S I+ 
Sbjct: 568 EIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKY 627

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            N+V IF   +++HP    IY++L+ L +KM   GY PD S VL DV + EK H+L++HS
Sbjct: 628 KNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHS 687

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LAIAFG+I  P + PI++ KNLRVC DCHN TKFIS+IT R+I+VRD+ RFH F +GI
Sbjct: 688 EKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGI 747

Query: 814 CSCGDYW 820
           CSCGD+W
Sbjct: 748 CSCGDFW 754



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 232/517 (44%), Gaps = 75/517 (14%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF-------- 136
           L+  YA  G L  +R  FD +   N++T N+++S       L +    F           
Sbjct: 51  LLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSY 110

Query: 137 -TLTSG----------------------------LRPDFYTFPPVLKACRNLVD---GKK 164
             L +G                            +RP   T   ++ A   L D   G++
Sbjct: 111 NALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQ 170

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV------------------ 206
           +HC +++LGF    F  + L+ MY + GL   A+++FD+M V                  
Sbjct: 171 VHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKM 230

Query: 207 -------------RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
                        RDS +W  M++G  Q+G   EALD+   MR EGV +D  T  SIL  
Sbjct: 231 VEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTA 290

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C        G  IH Y ++   + N+FV + L++MY+K   +R A  VF +M  ++++SW
Sbjct: 291 CGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISW 350

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
            ++I  Y Q+     A   F+ MQ  GI+P+  TL S+ S  A L         H   + 
Sbjct: 351 TAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALV 410

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G     + + +A+V +Y K G I  A  +F+ +P  D +S+  L++GYAQ G A E I+
Sbjct: 411 SG-LRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETID 469

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDM 492
           +F+ M     + PN  T++ +L A S  G + +G    H+    + +       TC++D+
Sbjct: 470 LFEKM-LLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDL 528

Query: 493 YGKCGRIDDAMSLFYQVPR-SSSVPWNAIISCHGIHG 528
           Y + GR+ +A     Q+PR   ++ W  ++S   + G
Sbjct: 529 YSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 205/452 (45%), Gaps = 54/452 (11%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H  ++  G     F+ + LV+ YA +G +  ++  FD +  +NV  +N+MI+  +RC
Sbjct: 169 RQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRC 228

Query: 124 -------------------------------GRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
                                          G  SEA+D F +     G+  D YTF  +
Sbjct: 229 KMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMR-AEGVGIDQYTFGSI 287

Query: 153 LKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L AC  L    +GK+IH   ++  ++ ++FV ++L+ MY +     +A  +F  M  ++ 
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AMI GY Q+G   EA+ +  EM+ +G+  +  T+ S++  CA   ++  G   H  
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            +  GL   + VS+ L+ +Y K G +  A R+FD+M   D VS+ ++++ Y Q       
Sbjct: 408 ALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKET 467

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQL----NDCRNSRSV---HGFIMRRGWFMEDVI 382
              F  M   G++P+ +T + + S  ++       C    S+   HG ++    +     
Sbjct: 468 IDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHY----- 522

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
               ++D+Y++ G +  A      +P   D I W TL++     G         + + + 
Sbjct: 523 --TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKT 580

Query: 442 NEINPNQGTYVSILPA----YSHVGALRQGIK 469
           +  NP     +  + A    +S V  LR+G++
Sbjct: 581 DPQNPASYVLLCSMHASKGEWSEVALLRRGMR 612



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 4/113 (3%)

Query: 47  EIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +     +  SC  L  ++   + H + +VSG    +  S+ LV  Y   G +  +   FD
Sbjct: 382 DFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFD 441

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            + + +  ++ +++S Y + G+  E +D F +  L  G++P+  TF  VL AC
Sbjct: 442 EMPFHDQVSYTALVSGYAQFGKAKETIDLFEKM-LLKGVKPNGVTFIGVLSAC 493


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/642 (37%), Positives = 376/642 (58%), Gaps = 6/642 (0%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVS 241
           SL+H+Y + G   +AR LFD MP+R+  SWN +++GY   GN +E L +   M  L+   
Sbjct: 55  SLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNAC 114

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            +     + L  C+    +  G+  H  + K GL  + +V + L++MY++   +  AL+V
Sbjct: 115 PNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQV 174

Query: 302 FDQMMER---DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            D +      D+ S+NS++ A  +S     A      M    +  D +T V +  + AQ+
Sbjct: 175 LDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQI 234

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D +    VH  ++R G  M D  +G+ ++DMY K G + +A  VF+GL  ++V+ W  L
Sbjct: 235 RDLQLGLRVHARLLRGG-LMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           +T Y QNG   E++ +F  M+    + PN+ T+  +L A + + ALR G  +HARV K  
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTL-PNEYTFAVLLNACAGIAALRHGDLLHARVEKLG 352

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
               V V   L++MY K G ID + ++F  +     + WNA+I  +  HG G +AL  F+
Sbjct: 353 FKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQ 412

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M+     P+++TF+ +L+A SH GLV EG  Y + +   F I+P L+HY CMV L  RA
Sbjct: 413 DMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRA 472

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A NF++   V+ D   W  LL AC +H N +LG   ++ + ++D  +VG Y L+S
Sbjct: 473 GLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLS 532

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+YA   +W+GV  +R L R+R +KK PG S +++ N + +F +    HP+  +IY +++
Sbjct: 533 NMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQ 592

Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
            L A +K LGYVP+ + VL DVE+++KE  L+ HSE+LA+A+G++  P  +PI+I KNLR
Sbjct: 593 QLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLR 652

Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +C DCH   K IS++T R IIVRD+NRFHHF+DG C+C D+W
Sbjct: 653 MCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/473 (29%), Positives = 250/473 (52%), Gaps = 28/473 (5%)

Query: 64  KRLHALLVVSGKIKT---VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
           K +HA  ++  +      +     LV+ Y   G L  +R+ FD +  RNV +WN +++ Y
Sbjct: 32  KAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGY 91

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWD 177
           +  G   E +  F          P+ Y F   L AC +   + +G + H  + K G    
Sbjct: 92  LHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCH 151

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMP---VRDSGSWNAMISGYCQSGNAVEALDILDE 234
            +V ++L+HMY R     +A ++ D +P   V D  S+N++++   +SG   EA+++L  
Sbjct: 152 QYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRR 211

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M  E V+ D +T   ++ +CA+  ++  GL +H  +++ GL F+ FV + LI+MY K G 
Sbjct: 212 MVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGE 271

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           + +A  VFD +  R+VV W +++ AY Q+     +   FT M + G  P+  T   L + 
Sbjct: 272 VLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNA 331

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A +   R+   +H  + + G F   VI+ NA+++MY+K G I+S+  VF  +  +D+I+
Sbjct: 332 CAGIAALRHGDLLHARVEKLG-FKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIIT 390

Query: 415 WNTLITGYAQNGLASEAIEVFQMM---EECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           WN +I GY+ +GL  +A++VFQ M   EEC    PN  T++ +L AYSH+G +++G    
Sbjct: 391 WNAMICGYSHHGLGKQALQVFQDMVSAEEC----PNYVTFIGVLSAYSHLGLVKEGFYYL 446

Query: 472 ARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
             +++N   F +       TC+V +  + G +D+A +      +++ V W+ +
Sbjct: 447 NHLMRN---FKIEPGLEHYTCMVALLSRAGLLDEAENFM----KTTQVKWDVV 492



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 181/385 (47%), Gaps = 11/385 (2%)

Query: 47  EIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F     +C+    VK   + H LL   G +   +  + LV+ Y+    +  +    D
Sbjct: 117 EYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLD 176

Query: 104 HIS---YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---R 157
            +      +++++NS+++  V  GR  EAV+   +  +   +  D  T+  V+  C   R
Sbjct: 177 TVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRM-VDECVAWDHVTYVGVMGLCAQIR 235

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L  G ++H  +L+ G  +D FV + L+ MY + G    AR +FD +  R+   W A+++
Sbjct: 236 DLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMT 295

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y Q+G   E+L++   M  EG   +  T A +L  CA    +  G L+H  + K G + 
Sbjct: 296 AYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKN 355

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           ++ V N LINMY+K G +  +  VF  M+ RD+++WN++I  Y        A   F  M 
Sbjct: 356 HVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMV 415

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            A   P+ +T + + S  + L   +        +MR       +     +V + ++ G++
Sbjct: 416 SAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLL 475

Query: 398 NSACAVFEGLPVK-DVISWNTLITG 421
           + A    +   VK DV++W TL+  
Sbjct: 476 DEAENFMKTTQVKWDVVAWRTLLNA 500



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 133/260 (51%), Gaps = 19/260 (7%)

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N++V +Y K G +  A  +F+ +P+++V+SWN L+ GY   G   E + +F+ M      
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN+  + + L A SH G +++G++ H  + K  L    +V + LV MY +C  ++ A+ 
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 505 LFYQVPR---SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           +   VP    +    +N++++     G+G++A+   R+M+DE V  DH+T+V ++  C+ 
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 562 SGLVSEGQRYFH------MMQEEFGIKPHLKHYGCM-VDLFGRAGHLGMAHNFIQNMPVR 614
              +  G R         +M +EF         G M +D++G+ G +  A N    +  R
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEF--------VGSMLIDMYGKCGEVLNARNVFDGLQNR 285

Query: 615 PDASIWGALLGACRIHGNME 634
            +  +W AL+ A   +G  E
Sbjct: 286 -NVVVWTALMTAYLQNGYFE 304


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/625 (37%), Positives = 348/625 (55%), Gaps = 72/625 (11%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H   V  GL  + FV+++L++ Y + G    A  VFD+M E++VV W+++IA Y    D
Sbjct: 39  LHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGD 98

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTS-------------------------------- 353
              A G    M+ AG++P+++T   L S                                
Sbjct: 99  AEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSC 158

Query: 354 ---IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
               V  + +    + VHG++++ G  ++  ++  A++DMY K G  +    VF      
Sbjct: 159 ALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVV-TALIDMYGKCGRADEIVRVFHESSHM 217

Query: 411 DVISWNTLITGYA-----------------------------------QNGLASEAIEVF 435
           DV S N L+ G +                                   QNG   EA+++F
Sbjct: 218 DVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLF 277

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           + M+    + PN  T   +LPA+++V AL  G   H   ++     DV+V + LVDMY K
Sbjct: 278 RTMQSIG-VEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAK 336

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG+   A ++F  +P  + V WNA+I  + +HG    A+  F  M     +PD +TF  +
Sbjct: 337 CGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCV 396

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           L ACS +GL  EG+RYF+ MQ+  GI P ++HY CMV L GR+G L  A++ I  MP  P
Sbjct: 397 LGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEP 456

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
           D+ IWG+LLG+CR++GN+ L  VA+++LF+++  N G YVL+SNIYA+   W+GV+ VR 
Sbjct: 457 DSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRD 516

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
             ++ GLKK  G S IE+ NKV +   G+ +HP    I ++L  LT +M  LG+ P + F
Sbjct: 517 EMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDF 576

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           VL DVEE EK++IL  HSE+LA+A G+IS+ P +P+++ KNLR+CGDCH   KFIS   +
Sbjct: 577 VLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQ 636

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           REI VRD+NRFHHFKDG CSCGDYW
Sbjct: 637 REISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 213/469 (45%), Gaps = 74/469 (15%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            Y F       PD +  P  LK+C      + +H + +  G   D FVA+SLLH Y R G
Sbjct: 7   LYHFLRHVSFPPDPHLLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLG 66

Query: 193 LANVARKLFDDMP-----------------------------VRDSG------SWNAMIS 217
               AR +FD MP                             +R +G      +WN ++S
Sbjct: 67  ATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVS 126

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G  +SG A++A+  L  M  EG   D   V+  L        +  G  +H Y+VK G   
Sbjct: 127 GLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRL 186

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQM-------------------------------- 305
           +  V   LI+MY K G     +RVF +                                 
Sbjct: 187 DACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFI 246

Query: 306 ---MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
              +E +VVSW SI+A   Q+   + A   F TMQ  G++P+ +T+  +    A +    
Sbjct: 247 CRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALM 306

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           + RS H F +R+G F+ DV +G+A+VDMYAK G    A  +F+ +P ++V+SWN +I GY
Sbjct: 307 HGRSAHCFSLRKG-FLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGY 365

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCF 481
           A +G A+ A+++F  M++C +  P+  T+  +L A S  G   +G +    + + + +  
Sbjct: 366 AMHGDAANAVQLFCSMQKCKQ-KPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISP 424

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
            +    C+V + G+ G++D+A  L  ++P    S  W +++    ++G 
Sbjct: 425 RMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 194/483 (40%), Gaps = 83/483 (17%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY-- 111
            +SC      + LHA  VVSG  +  F ++ L++ Y  LG    +R  FD +  +NV   
Sbjct: 27  LKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGW 86

Query: 112 ---------------------------------TWNSMISVYVRCGRLSEAVDCFYQFTL 138
                                            TWN ++S   R GR  +AV    +   
Sbjct: 87  SALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMH- 145

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
           + G  PD       L A  ++ +   GK++H  V+K G   D  V  +L+ MY + G A+
Sbjct: 146 SEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRAD 205

Query: 196 VARKLFDDMPVRDSGSWNAMISGY-----------------------------------C 220
              ++F +    D  S NA+++G                                     
Sbjct: 206 EIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCV 265

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+G  +EA+D+   M+  GV  + +T+  +LP  A    ++ G   H + ++ G   +++
Sbjct: 266 QNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVY 325

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V + L++MYAK G  RHA  +FD M  R+VVSWN++I  Y    D   A   F +MQ+  
Sbjct: 326 VGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCK 385

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            +PDL+T   +    +Q       R     + +       +     +V +  + G ++ A
Sbjct: 386 QKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEA 445

Query: 401 CAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             +   +P + D   W +L+     Y    LA  A E    +E       N G YV +  
Sbjct: 446 YDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEP-----GNAGNYVLLSN 500

Query: 457 AYS 459
            Y+
Sbjct: 501 IYA 503


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 264/693 (38%), Positives = 397/693 (57%), Gaps = 23/693 (3%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + Q+CT    L   ++ HA ++V+G        TKL+  Y   G    +++ F  +    
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
              WN MI  +   G+   A+  FY   L  G  PD YTFP V+KAC  L     G+ +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFAL-LFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             +  +GFE DVFV +SL+  Y   G  + AR LFD MP +D   WN M++GY ++G+  
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN-- 284
            A  +  EMR    + + +T A +L VCA    I  G  +H  +V  GLE +  V+N   
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFA 290

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI++Y K   +  A ++FDQ    D+V   ++I+ Y  +     A   F  + Q  ++ +
Sbjct: 291 LIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRAN 350

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +TL S+    A L      + +HG I++ G       +G+A++DMYAK G ++ A   F
Sbjct: 351 SVTLASVLPACAGLAALTLGKELHGHILKNG-HGGSCYVGSAIMDMYAKCGRLDLAHQTF 409

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME------ECNEINPNQGTYVSILPAY 458
            G+  KD + WN++IT  +QNG   EAI++F+ M       +C  I+       + L A 
Sbjct: 410 IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSIS-------AALSAC 462

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +++ AL  G +IHA +++     D+F  + L+DMY KCG +D A  +F  +   + V WN
Sbjct: 463 ANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWN 522

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +II+ +G HG+   +LN F  ML +G++PDH+TF+++++AC H+G V EG  YF  M EE
Sbjct: 523 SIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEE 582

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
            GI   ++HY CMVDLFGRAG L  A   I +MP  PDA +WG LLGACR+HGN+EL  V
Sbjct: 583 LGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEV 642

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           AS  LF++D +N GYYVL+SN++AN G+WE V ++RSL ++RG++K PG S I+VNN   
Sbjct: 643 ASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTH 702

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           +F   +R+HP+  +IY  L+NL  +++  GYVP
Sbjct: 703 MFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 735



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 8/391 (2%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + SIL  C     +  G   H  ++ +G+ +N  +   L+ MY   G    A  +F Q+ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
                 WN +I  +        A  F+  M   G  PD  T   +      LN     R 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH  I   G F  DV +G++++  Y++ G I+ A  +F+ +P KD + WN ++ GY +NG
Sbjct: 169 VHDKIQFMG-FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNG 227

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
               A  VF  M    E NPN  T+  +L   +    +  G ++H  V+ + L  D  VA
Sbjct: 228 DWDNATGVFMEMRR-TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 487 T--CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
               L+D+Y KC  ++ A  +F Q      V   A+IS + ++G  + AL  FR +L E 
Sbjct: 287 NTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           +R + +T  S+L AC+    ++ G+  + H+++   G   ++     ++D++ + G L +
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDL 404

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           AH     +  + DA  W +++ +C  +G  E
Sbjct: 405 AHQTFIGISDK-DAVCWNSMITSCSQNGKPE 434



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 4/209 (1%)

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           VSIL   +    L QG + HA+++ N + ++  + T L+ MY  CG   DA ++FYQ+  
Sbjct: 50  VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
             S PWN +I    + GQ D AL F+ +ML  G  PD  TF  ++ AC     V+ G R 
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG-RV 168

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H   +  G +  +     ++  +   G +  A      MP + D  +W  +L     +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLNGYVKNG 227

Query: 632 NME--LGAVASDRLFEVDSENVGYYVLMS 658
           + +   G     R  E +  +V +  ++S
Sbjct: 228 DWDNATGVFMEMRRTETNPNSVTFACVLS 256


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/736 (34%), Positives = 407/736 (55%), Gaps = 56/736 (7%)

Query: 86  VNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
           ++++A LG +  +R+ FD +  + V +WN++++ Y    R +EA   F +        P+
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM-------PE 75

Query: 146 FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
                      RN +               W+  V+      Y + G+ + ARK+FD MP
Sbjct: 76  -----------RNTIS--------------WNGLVSG-----YVKNGMISEARKVFDKMP 105

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R+  SW +M+ GY Q G   EA  +   M  + V    + +  ++    R D   +  L
Sbjct: 106 ERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIE-DGRVDE--ARRL 162

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
             +  VK     ++  S N+I      G +  A  +FD+M +R+VV+W S+I+ Y  +N 
Sbjct: 163 FDMIPVK-----DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNK 217

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  M      PD    V+ T+++      R+ R      + +   ++ V   N
Sbjct: 218 VDVARKLFEVM------PDK-NEVTWTAMLKGYT--RSGRINEAAELFKAMPVKPVAACN 268

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            ++  +   G +  A  VF+ +  KD  +W+ LI  Y + G   EA+ +F +M+    + 
Sbjct: 269 GMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQR-EGVR 327

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN  + +SIL     + +L  G ++H++++++    D++V++ L+ MY KCG +     +
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRV 387

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F +      V WN+II+ +  HG G+KAL  F +M   G  PD ITF+ +L+AC ++G V
Sbjct: 388 FDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKV 447

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG   F  M+ ++ +    +HY CMVDL GRAG L  A N I+NMPV  DA +WGALL 
Sbjct: 448 KEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLS 507

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           ACR H N++L  +A+ +L +++  + G Y+L+SN+YA+  +W+ V E+R   R R + K+
Sbjct: 508 ACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKS 567

Query: 686 PGWSSIEVNNKVDIFY-TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
           PG S IEV+NKV +F   G+ +HP++E I  +L  L A ++  GY PD SFV+ DV+E++
Sbjct: 568 PGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEED 627

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K H L  HSE++A+A+G++  P   PI++ KNLRVCGDCH+  K I+Q+T REII+RD+N
Sbjct: 628 KVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDAN 687

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHFKDG+CSC D+W
Sbjct: 688 RFHHFKDGLCSCRDFW 703



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 231/496 (46%), Gaps = 76/496 (15%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +   S   LV+ Y   G +S +R  FD +  RNV +W SM+  YV+ G + EA   F++ 
Sbjct: 76  RNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRM 135

Query: 137 ---------TLTSGLRPD--------FYTFPPV--LKACRNLVDGKKIHCSVLKLGFEWD 177
                     +  GL  D         +   PV  + A  N++ G    CS  +L    +
Sbjct: 136 PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGG---LCSEGRLSEARE 192

Query: 178 VF---------VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           +F            S++  Y      +VARKLF+ MP ++  +W AM+ GY +SG   EA
Sbjct: 193 IFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEA 252

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            ++   M              + PV A                           N +I  
Sbjct: 253 AELFKAM-------------PVKPVAA--------------------------CNGMIMG 273

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           +   G +  A  VFDQM E+D  +W+++I  YE+    + A   F+ MQ+ G++P+  ++
Sbjct: 274 FGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSI 333

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           +S+ S+   L    + R VH  ++R   F  D+ + + ++ MY K G + +   VF+   
Sbjct: 334 ISILSVCGSLASLDHGRQVHSQLVRSH-FDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            KD++ WN++I GYAQ+G   +A+EVF  M       P++ T++ +L A  + G +++G+
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAA-PDEITFIGVLSACGYTGKVKEGL 451

Query: 469 KIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
           +I    +K+    D       C+VD+ G+ G++++AM+L   +P  + ++ W A++S   
Sbjct: 452 EIF-ESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACR 510

Query: 526 IHGQGDKALNFFRQML 541
            H   D A    +++L
Sbjct: 511 THKNLDLAEIAAKKLL 526



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 162/357 (45%), Gaps = 27/357 (7%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY- 134
           +K V +ST ++    + G LS +R  FD +  RNV  W SMIS Y    ++  A   F  
Sbjct: 168 VKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEV 227

Query: 135 -----QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH----CSVLKLGFEWDVFVAASLL 185
                + T T+ L+   YT    +     L     +     C+ + +GF  +        
Sbjct: 228 MPDKNEVTWTAMLKG--YTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLN-------- 277

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
                 G    AR +FD M  +D G+W+A+I  Y + G  +EAL +   M+ EGV  +  
Sbjct: 278 ------GEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFP 331

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           ++ SIL VC    ++  G  +H  +V+   + +++VS+ LI MY K G +    RVFD+ 
Sbjct: 332 SIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF 391

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
             +D+V WNSIIA Y Q      A   F  M  +G  PD +T + + S        +   
Sbjct: 392 SSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGL 451

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
            +   +  +    +       +VD+  + G +N A  + E +PV+ D I W  L++ 
Sbjct: 452 EIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 145/295 (49%), Gaps = 12/295 (4%)

Query: 30  AANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFY 89
           A    ++ PD       E+ +  + +  T+   +    A L  +  +K V +   ++  +
Sbjct: 221 ARKLFEVMPD-----KNEVTWTAMLKGYTRSGRINEA-AELFKAMPVKPVAACNGMIMGF 274

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTF 149
              G++  +R  FD +  ++  TW+++I +Y R G   EA+   +      G+RP+F + 
Sbjct: 275 GLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEAL-ALFSLMQREGVRPNFPSI 333

Query: 150 PPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
             +L  C +L     G+++H  +++  F+ D++V++ L+ MY + G     +++FD    
Sbjct: 334 ISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSS 393

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           +D   WN++I+GY Q G   +AL++  EM   G + D IT   +L  C  +  +  GL I
Sbjct: 394 KDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEI 453

Query: 267 HLYI-VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              +  K+ ++        ++++  + G +  A+ + + M +E D + W ++++A
Sbjct: 454 FESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 140/323 (43%), Gaps = 45/323 (13%)

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            I  R +F     I    +  +A+LG I+ A  +F+ L  K V SWN ++ GY  N   +
Sbjct: 5   LIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPA 64

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA ++F  M E N I+ N      ++  Y   G + +  K+  ++ +     +V   T +
Sbjct: 65  EAQKLFDKMPERNTISWN-----GLVSGYVKNGMISEARKVFDKMPER----NVVSWTSM 115

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF------------ 537
           V  Y + G ID+A  LF+++P  + V W  ++      G+ D+A   F            
Sbjct: 116 VRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVAST 175

Query: 538 ---------------RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
                          R++ DE  + + + + S+++  + +  V   ++ F +M ++  + 
Sbjct: 176 NMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVT 235

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
                +  M+  + R+G +  A    + MPV+P A+  G ++G   ++G +       D+
Sbjct: 236 -----WTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFG-LNGEVGKARWVFDQ 289

Query: 643 LFEVDSENVGYYVLMSNIYANVG 665
           + E D    G +  +  IY   G
Sbjct: 290 MKEKDD---GTWSALIKIYERKG 309



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 11/204 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L H +++H+ LV S     ++ S+ L+  Y   GDL   +  FD  S +++  WNS
Sbjct: 342 SLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNS 401

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 172
           +I+ Y + G   +A++ F++   +SG  PD  TF  VL AC     + +G +I  S +K 
Sbjct: 402 IIAGYAQHGFGEKALEVFHEM-FSSGAAPDEITFIGVLSACGYTGKVKEGLEIFES-MKS 459

Query: 173 GFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEAL 229
            ++ D      A ++ +  R G  N A  L ++MPV  D+  W A++S  C++   ++  
Sbjct: 460 KYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA-CRTHKNLDLA 518

Query: 230 DILDE--MRLEGVSMDPITVASIL 251
           +I  +  ++LE  S  P  + S L
Sbjct: 519 EIAAKKLLQLEPSSAGPYILLSNL 542


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/677 (36%), Positives = 387/677 (57%), Gaps = 15/677 (2%)

Query: 157 RNLVDGKKIHCSVLKLG--------FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +NL  GK IH  +L            E+++    SL+++Y +     +AR LFD+M +R 
Sbjct: 26  KNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRS 85

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             S+N ++ GY  SG  +E + +   M       +     ++L  CA S  +  G+  H 
Sbjct: 86  VVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHG 145

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM-----ERDVVSWNSIIAAYEQS 323
           ++ K GL F+ FV ++L++MY+K   +  AL+V +        + D   +NS++ A  +S
Sbjct: 146 FLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVES 205

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                A      M   G+  D +T VS+  +  Q+ D      VH  +++ G    DV +
Sbjct: 206 GRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLK-GGLTFDVFV 264

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           G+ +VDM+ K G + SA  VF+GL  ++V+ W +L+T Y QNG   E + +   M+    
Sbjct: 265 GSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGT 324

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           ++ N+ T+  +L A++ + ALR G  +HARV K  +   V V   L++MY KCG ID + 
Sbjct: 325 MS-NEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSY 383

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F+ +     + WNA+I  +  HG G +AL  F+ ML  G  P+H+TFV +L+AC+H  
Sbjct: 384 DVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLA 443

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV+EG  Y + + + F ++P L+HY C+V +  RAG L  A NF++   V+ D   W  L
Sbjct: 444 LVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVL 503

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           L AC IH N  LG   ++ + ++D  ++G Y L+SN+YA    W+ V  +R + R+R +K
Sbjct: 504 LNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVK 563

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K PG S IE+ N V +F +    HP+  +IY++++ L   +K LGYVP+   VL DVE++
Sbjct: 564 KEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDE 623

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           +KE  L  HSE+LAIA+G++  P  +PI++ KNLR+C DCH   K IS++T R IIVRD+
Sbjct: 624 QKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDA 683

Query: 804 NRFHHFKDGICSCGDYW 820
           +RFHHF+DG C+C D+W
Sbjct: 684 SRFHHFRDGTCTCTDHW 700



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 249/477 (52%), Gaps = 30/477 (6%)

Query: 64  KRLHALLVVSGKIKT--------VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           K +H  L++  +  T        +     L+N Y     L  +R+ FD +S R+V ++N 
Sbjct: 32  KSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNV 91

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           ++  Y+  G   E V  F    ++S  +P+ Y F  VL AC +   + +G + H  + K 
Sbjct: 92  LMGGYLHSGEHLEVVKLFKNM-VSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKF 150

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDM-----PVRDSGSWNAMISGYCQSGNAVE 227
           G  +  FV +SL+HMY +    ++A ++ +          D+  +N++++   +SG   E
Sbjct: 151 GLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGE 210

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A+++L  M  EGV  D +T  S++ +C +  ++  GL +H  ++K GL F++FV + L++
Sbjct: 211 AVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVD 270

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           M+ K G +  A +VFD +  R+VV W S++ AY Q+ +        + M + G   +  T
Sbjct: 271 MFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFT 330

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
              L +  A +   R+   +H  + + G     VI+GNA+++MY+K G I+S+  VF  +
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLG-IKNRVIVGNALINMYSKCGCIDSSYDVFFDM 389

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             +D+I+WN +I GY+Q+GL  +A+ +FQ M    E  PN  T+V +L A +H+  + +G
Sbjct: 390 RNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGEC-PNHVTFVGVLSACAHLALVNEG 448

Query: 468 IKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
                +++K+   F V       TC+V +  + G +++A +      R++ V W+ +
Sbjct: 449 FYYLNQLMKH---FKVEPGLEHYTCVVAVLCRAGMLEEAENFM----RTTQVKWDVV 498



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 6/260 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++HA L+  G    VF  + LV+ +   GD+  +R  FD +  RNV  W S+++ Y++ G
Sbjct: 248 QVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNG 307

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVA 181
              E ++         G   + +TF  +L A   +     G  +H  V KLG +  V V 
Sbjct: 308 EFEETLNLLSCMD-REGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVG 366

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +L++MY + G  + +  +F DM  RD  +WNAMI GY Q G   +AL +  +M   G  
Sbjct: 367 NALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGEC 426

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHALR 300
            + +T   +L  CA    +  G      ++KH  +E  L     ++ +  + GM+  A  
Sbjct: 427 PNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAEN 486

Query: 301 VF-DQMMERDVVSWNSIIAA 319
                 ++ DVV+W  ++ A
Sbjct: 487 FMRTTQVKWDVVAWRVLLNA 506



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 48/303 (15%)

Query: 40  CLENE---SREIDFDDL---FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG 93
           C++ E   S E  F  L   F     L H   LHA +   G    V     L+N Y+  G
Sbjct: 318 CMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCG 377

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
            +  S   F  +  R++ TWN+MI  Y + G   +A+   +Q  L++G  P+  TF  VL
Sbjct: 378 CIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQAL-LLFQDMLSAGECPNHVTFVGVL 436

Query: 154 KACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
            AC         H +++  GF    ++   + H     GL +                + 
Sbjct: 437 SAC--------AHLALVNEGF---YYLNQLMKHFKVEPGLEH----------------YT 469

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
            +++  C++G   EA +    MR   V  D +    +L  C    N   G  I   I++ 
Sbjct: 470 CVVAVLCRAGMLEEAENF---MRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQM 526

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV-----VSWNSI-----IAAYEQS 323
               ++     L NMYAK         +   M ER+V     VSW  I     + + + S
Sbjct: 527 DPR-DMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGS 585

Query: 324 NDP 326
           N P
Sbjct: 586 NHP 588


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/770 (34%), Positives = 405/770 (52%), Gaps = 19/770 (2%)

Query: 67   HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI---SYRNVYTWNSMISVYVRC 123
            H  +V  G  +    +T L++ +A  G +  +R  F+ +   S + +  WN+MI+ Y   
Sbjct: 355  HDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 414

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
            G   EA+       L  G++P+  TF   L AC +L DG+ +H  + + GF+ +V VA +
Sbjct: 415  GCSKEALFLLDSLQL-QGVKPNCITFISSLGACSSLQDGRALHLLIHESGFDQEVSVANA 473

Query: 184  LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
            L+ MY + G    + KLF +M  +D  SWN+ I+ +   G + E + +LD+MR EG   +
Sbjct: 474  LVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYE 533

Query: 244  PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             +T  + L  C    ++  G+L+H  IV+ G E +  V++ +INMY + G +  A  +F 
Sbjct: 534  KVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFT 593

Query: 304  QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ--LNDC 361
            ++   DV+ W  ++  Y Q          F +M   G++P  +TLV+L + VA   L   
Sbjct: 594  RVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHF 653

Query: 362  RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            R+   +       G    + ++ N++++M+++   ++ A A+F+  P K V    T++  
Sbjct: 654  RDGVWISSLAWESG-LESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAA 712

Query: 422  YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            Y +     EA            + P+  T V+ + A   +       ++H R  +  L  
Sbjct: 713  YVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLES 772

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
            +  VA  LVDMYGK G +D A  +F +  R +   WNA+   +   G     L   R M 
Sbjct: 773  ETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQ 832

Query: 542  DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             +G RPD +TFVSLL+ C HSGL+ E +  F  M+ EFGI P  KHY C++DL  RAG L
Sbjct: 833  RDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGEL 892

Query: 602  GMAHNFIQNMPVRPDAS--IWGALLGACRIHGNMELGAVASDRLFEVDSENV-------- 651
              A +FI  + V   AS  +W ALLGACR  GN             +D E +        
Sbjct: 893  QQAEDFIARISVSSPASSPMWMALLGACRSLGNSSS-RARRAARNAMDVEKMEPRSQHDP 951

Query: 652  -GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
               +V ++NI A  G W+    +R    ++GL+K PG S I V N++  F  G+R HP+ 
Sbjct: 952  SAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRR 1011

Query: 711  EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
            E+IY ELR L   M   GYV D   V  +V E +K  +L  HSE+LA+AFG++S+PP S 
Sbjct: 1012 EEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSS 1071

Query: 771  IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            ++I KNLR CGDCH   K IS I  REI+VRDSNRFHHF++G CSCGDYW
Sbjct: 1072 LRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 161/601 (26%), Positives = 292/601 (48%), Gaps = 36/601 (5%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKI-------KTVFSSTKLVNFYANLGDLSFSR 99
           +  L + C +L  +   KRLHA +  SG +          F    LV  Y   G    ++
Sbjct: 17  YARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 76

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
             FD I+++N+++W S++  Y   G  ++A++ F+Q  + +G+ PD   +  +LK C  L
Sbjct: 77  RAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQM-IKAGVEPDRLVYARLLKECGRL 135

Query: 160 VD---GKKIHCSVLKLGFEWD-------VFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
            D   GK++H  + + G   D        F+   L+ MY + G  + A++ FD +  ++ 
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNI 195

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW +++  Y  +G   +AL+   +M   GV  D +   + L VC     +  G  IH  
Sbjct: 196 FSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQ 255

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           I    L+ +L + N L++MY K G +  A  +FD +  R+V+SW  +++ + ++      
Sbjct: 256 IQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRET 315

Query: 330 HGFFTTMQQAGIQPD---LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
            G   +M   GI+PD   LLTL+++ S    L++  +S   H +I+  G    + ++  A
Sbjct: 316 WGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDE--DSWMAHDYIV-GGGLDREAVVATA 372

Query: 387 VVDMYAKLGIINSACAVFEGLP---VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           ++ M+A+ G ++ A  +FE +     + +  WN +IT YA  G + EA+ +   + +   
Sbjct: 373 LLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL-QLQG 431

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN  T++S L A S   +L+ G  +H  + ++    +V VA  LV MYGKCG + D+ 
Sbjct: 432 VKPNCITFISSLGACS---SLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSA 488

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            LF ++       WN+ I+ H  HG+ D+ +    QM  EG   + +TF++ L +C+   
Sbjct: 489 KLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPA 548

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            + +G    H    + G +        +++++GR G L  A      +    D  +W  +
Sbjct: 549 SLQDGV-LMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKT-FDVILWTGM 606

Query: 624 L 624
           L
Sbjct: 607 L 607



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 238/504 (47%), Gaps = 25/504 (4%)

Query: 32  NSLQ---ISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF 88
           +SLQ   + P+C       I F     +C+ L   + LH L+  SG  + V  +  LV  
Sbjct: 425 DSLQLQGVKPNC-------ITFISSLGACSSLQDGRALHLLIHESGFDQEVSVANALVTM 477

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           Y   G L  S   F  ++ +++ +WNS I+ +   GR  E +    Q     G   +  T
Sbjct: 478 YGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMR-GEGFLYEKVT 536

Query: 149 FPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           F   L +C +   L DG  +H  +++ G+E D  VA+++++MY R G  + AR++F  + 
Sbjct: 537 FLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVK 596

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS--DNILSG 263
             D   W  M++ YCQ G   + ++    M  EG+    +T+ +++   A S  ++   G
Sbjct: 597 TFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDG 656

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY-EQ 322
           + I     + GLE    V+N+LI M+++F  +  A  +FD+  E+ V    +++AAY + 
Sbjct: 657 VWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKG 716

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                 A   F  M   G++P  +TLV+  S    L D  +S+ VH      G    +  
Sbjct: 717 ERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELG-LESETC 775

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + N +VDMY K G +++A  +F+    ++V +WN +   Y Q G+    + + + M+  +
Sbjct: 776 VANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQR-D 834

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRID 500
              P+  T+VS+L    H G L +  + +   ++     D      +C++D+  + G + 
Sbjct: 835 GYRPDSVTFVSLLSVCGHSGLLEEA-RYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQ 893

Query: 501 DAMSLFYQVPRSS--SVP-WNAII 521
            A     ++  SS  S P W A++
Sbjct: 894 QAEDFIARISVSSPASSPMWMALL 917


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 357/584 (61%), Gaps = 13/584 (2%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGL-----EFNLFVSNNLINMYAKFGMMRH 297
           DP+++  ++ +C R      G LIH ++  HG         LFVSN+L +MYAKFG++  
Sbjct: 63  DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDD 122

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
           ALR+FD M  R+VV+W +++AA   ++     A  F   M++ G+ P+  T    +S++ 
Sbjct: 123 ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTF---SSVLG 179

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                    +VH   ++ G    DV + ++++D Y KLG ++    VF+ +  +D++ WN
Sbjct: 180 ACTTPGMLTAVHASTVKAG-LDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWN 238

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           ++I G+AQ+G    AIE+F  M++    + NQGT  S+L A + +  L  G ++HA V+K
Sbjct: 239 SIIAGFAQSGDGVGAIELFMRMKDAG-FSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
                D+ +   L+DMY KCG ++DA +LF+++P+   + W+ ++S    +G+  +AL  
Sbjct: 298 --YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV 355

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F  M  +GV P+H+T V +L ACSH+GLV +G  YF  M+  FGI+P  +H+ CMVDL G
Sbjct: 356 FDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG L  A  FI  M + PD+ IW  LLGACR+H N  L A A+  + +++ ++ G  VL
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVL 475

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SN YA++ +W   ++     RDRG++K PG S IE+  +V +F  G+ +HP  + I  E
Sbjct: 476 LSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQE 535

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  L  ++KSLGYVP   FVLQD+  ++KE +L  HSE++AI FG + +    PI+I KN
Sbjct: 536 LNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKN 595

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LR+CGDCH + K +S+   R I++RD  RFHHF+DG CSCGDYW
Sbjct: 596 LRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 192/384 (50%), Gaps = 9/384 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC-GRLSEAVDCFYQFT 137
           +F S  L + YA  G L  +   FD +  RNV TW ++++      GR  EA+  F    
Sbjct: 104 LFVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALR-FLVAM 162

Query: 138 LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
              G+ P+ YTF  VL AC        +H S +K G + DVFV +SL+  Y + G  +  
Sbjct: 163 RRDGVAPNAYTFSSVLGACTTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGG 222

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++FD+M  RD   WN++I+G+ QSG+ V A+++   M+  G S +  T+ S+L  C   
Sbjct: 223 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGM 282

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             + +G  +H +++K+  + +L + N L++MY K G +  A  +F +M +RDV+SW++++
Sbjct: 283 VMLEAGRQVHAHVLKY--DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMV 340

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           +   Q+   + A   F  M+  G+ P+ +T+V +    +      +       + R    
Sbjct: 341 SGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGI 400

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQ 436
             +    N +VD+  + G ++ A     G+ ++ D + W TL+     +  AS A    +
Sbjct: 401 QPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAR 460

Query: 437 MMEECNEINP-NQGTYVSILPAYS 459
              E  ++ P +QG  V +   Y+
Sbjct: 461 ---EILKLEPDDQGARVLLSNTYA 481


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/712 (36%), Positives = 378/712 (53%), Gaps = 72/712 (10%)

Query: 181 AASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           A SL+  Y   G    A   FD +P   RD+   NA+IS Y ++ +A  A+ +   +   
Sbjct: 91  ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 239 G-VSMDPITVASILPVCARSDNILSGLLIHLY--IVKHGLEFNLFVSNNLINMYAK---F 292
           G +  D  +  ++L       NI       L   ++K G    L VSN L+ +Y K    
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210

Query: 293 GMMRHALRVFDQMMERDVVSW-------------------------------NSIIAAYE 321
              R A +V D+M ++D ++W                               N++I+ Y 
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-RGWFMED 380
            S   + A   F  M    +  D  T  S+ S  A      + +SVHG I R +  F+ +
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330

Query: 381 VI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
               + NA+V +Y+K G I  A  +F+ +  KDV+SWNT+++GY ++    +A+EVF+ M
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 439 EECNE------------------------------INPNQGTYVSILPAYSHVGALRQGI 468
              NE                              + P   TY   + A   +G+L+ G 
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           ++H  +++            L+ MY +CG + +A  +F  +P   SV WNA+IS  G HG
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +AL  F +M+ EG+ PD I+F+++LTAC+HSGLV EG +YF  M+ +FGI P   HY
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
             ++DL GRAG +G A + I+ MP  P  SIW A+L  CR  G+MELGA A+D+LF++  
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           ++ G Y+L+SN Y+  G+W     VR L RDRG+KK PG S IE  NKV +F  G+  HP
Sbjct: 631 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHP 690

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           +  K+Y  L  + A+M+ LGYVPD   VL D+E  +KEHIL +HSERLA+ FG++  PP 
Sbjct: 691 EAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPG 750

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + + + KNLR+C DCH    F+S+   REI+VRD  RFHHFKDG CSCG+YW
Sbjct: 751 ATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 174/630 (27%), Positives = 278/630 (44%), Gaps = 103/630 (16%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIK---TVF-------SSTKLVNFYANLGDLSFSRHTF 102
           L  +    H   RL  L  +SG +    T+F       ++T LV  YA  G L  +   F
Sbjct: 52  LLHAPPHPHLTLRLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFF 111

Query: 103 DHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
           D +  + R+    N++IS Y R    + AV  F     +  LRPD Y+F  +L A  +L 
Sbjct: 112 DAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLP 171

Query: 161 D-----GKKIHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRDSGS- 211
           +       ++ CSVLK G    + V+ +L+ +Y +         ARK+ D+MP +D+ + 
Sbjct: 172 NISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTW 231

Query: 212 ------------------------------WNAMISGYCQSGNAVEALDILDEMRLEGVS 241
                                         WNAMISGY  SG  VEA ++   M LE V 
Sbjct: 232 TTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVP 291

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF----NLFVSNNLINMYAKFGMMRH 297
           +D  T  S+L  CA +     G  +H  I +    F     L V+N L+ +Y+K G +  
Sbjct: 292 LDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAV 351

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITA-----------------------HG--- 331
           A R+FD M  +DVVSWN+I++ Y +S+    A                       HG   
Sbjct: 352 ARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFS 411

Query: 332 -----FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
                 F  M+   ++P   T     S   +L   ++ + +HG +++ G F      GNA
Sbjct: 412 EDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLG-FEGSNSAGNA 470

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           ++ MYA+ G +  A  +F  +P  D +SWN +I+   Q+G   EA+E+F  M     I P
Sbjct: 471 LITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM-VAEGIYP 529

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDA 502
           ++ +++++L A +H G + +G +    + ++   F +       T L+D+ G+ GRI +A
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFQYFESMKRD---FGIIPGEDHYTRLIDLLGRAGRIGEA 586

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACS 560
             L   +P   +   W AI+S  G    GD  L          + P H  T++ L    S
Sbjct: 587 RDLIKTMPFEPTPSIWEAILS--GCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYS 644

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            +G   +  R   +M++  G+K   K  GC
Sbjct: 645 AAGRWVDAARVRKLMRDR-GVK---KEPGC 670



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 19/289 (6%)

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           V+ TS+VA         +   F         D ++ NAV+  YA+      A AVF  L 
Sbjct: 89  VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSL- 147

Query: 409 VKDVISWNTLITGYAQNGLASEA-----IEVFQMME-ECNEINPNQGTYVSILPA----Y 458
              + S +     Y+   L S A     I V    + +C+ +    G  +S+  A    Y
Sbjct: 148 ---LASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALY 204

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
               AL +  +   +V+      D    T +V  Y + G +  A S+F +V     V WN
Sbjct: 205 MKCEAL-EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWN 263

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY---FHMM 575
           A+IS +   G   +A   FR+M+ E V  D  TF S+L+AC+++G  + G+        +
Sbjct: 264 AMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRL 323

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           Q  F  +  L     +V L+ + G++ +A     NM  + D   W  +L
Sbjct: 324 QPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK-DVVSWNTIL 371


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/830 (31%), Positives = 434/830 (52%), Gaps = 93/830 (11%)

Query: 44   ESREIDFDDL-----FQSCTKLHHVKRLHALLVVSGKIKTVF--SSTKLVN----FYANL 92
            +++ ++FD++     F+ C  L +  R     +  G IK     S T++V+    FY   
Sbjct: 516  QNKGVNFDEVVLAMVFRICAVLMY--RFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRC 573

Query: 93   GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
              L  +   FD +  R+   WN ++ V ++ G   +AV  F      SG +    T   +
Sbjct: 574  VSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRF-SGAKAYDSTMVKL 632

Query: 153  LKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
            L+ C N      G++IH  VL+LGFE +V +  SL+ MY R G    +RK+F+ M  R+ 
Sbjct: 633  LQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNL 692

Query: 210  GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT----------------------- 246
             SWN+++S Y + G   +A+ +LDEM   G+  D +T                       
Sbjct: 693  SSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKR 752

Query: 247  --VASILPVCARSDNILS----------GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
              +A + P  +   ++L           G  IH Y++++ L ++++V   LI+MY K G 
Sbjct: 753  IQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGY 812

Query: 295  MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
            + +A  VFD M E+++V+WNS+I+    +     A    + M++ GI+ + +T       
Sbjct: 813  LPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVT------- 865

Query: 355  VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK---- 410
                                 W        N++V  YA  G    A AV   +       
Sbjct: 866  ---------------------W--------NSLVSGYATWGKTEKALAVVGKMKKNGVEP 896

Query: 411  DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
            +V+SW  +++G ++NG     +++F  M+E   ++PN  T  S+L     +  L  G ++
Sbjct: 897  NVVSWTAILSGCSKNGNFGNGLKIFLKMQE-EGVSPNSATISSLLRILGCLSLLYSGKEV 955

Query: 471  HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
            H+  +KN L  D  VAT LVDMY K G +  A  +F+ +       WN +I  + +  +G
Sbjct: 956  HSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRG 1015

Query: 531  DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            ++ +  F  ML+ G+ PD ITF S+L+ C +SGLV EG +YF +M+  +G+ P ++H  C
Sbjct: 1016 EEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSC 1075

Query: 591  MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
            MV+L GR+G+L  A +FI+ MP++PDA+IWGA L +C+IH ++EL  +A  RL  ++  N
Sbjct: 1076 MVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHN 1135

Query: 651  VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
               Y++M N+Y+N+ +W  V+ +R+   +  ++    WS I+++  V IFY   + HP  
Sbjct: 1136 SANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDE 1195

Query: 711  EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
             +IY EL  L ++MK  GY+PD   + Q+V E EKE +L  H+E+LA+ +G+I     +P
Sbjct: 1196 GEIYFELYKLVSEMKKSGYMPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAP 1255

Query: 771  IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I++ KN  +C DCH   K+IS +  REI++++  R HHF+DG CSC + W
Sbjct: 1256 IRVVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 251/555 (45%), Gaps = 93/555 (16%)

Query: 166 HCSVLKL--GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           H  ++KL   FE + F++  L+  Y  FG    A  +F     R+  SW   +      G
Sbjct: 444 HARMMKLIDRFELE-FISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFG 502

Query: 224 NAVEALDILDE-MRLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE-FNL 279
             VE   +L+E +RL+  GV+ D + +A +  +CA       G  IH  ++K GL+  + 
Sbjct: 503 --VEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDT 560

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V + L+  Y +   +  A ++FD+M +RD ++WN I+    QS +   A   F  M+ +
Sbjct: 561 RVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFS 620

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G +    T+V L  + +        R +HG+++R G F  +V + N+++ MY++ G + S
Sbjct: 621 GAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLG-FESNVSMCNSLIVMYSRNGKLES 679

Query: 400 ACAVFEGLPVK-----------------------------------DVISWNTLITGYAQ 424
           +  VF  +  +                                   D+++WN+L++GYA 
Sbjct: 680 SRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYAS 739

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
             L+ +AI V + ++    + PN  +  S+L A    G ++ G  IH  VI+N L +DV+
Sbjct: 740 KALSRDAIAVLKRIQIAG-LKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVY 798

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVP---------------------------------- 510
           V T L+DMY K G +  A  +F  +                                   
Sbjct: 799 VETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEG 858

Query: 511 -RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
            +S++V WN+++S +   G+ +KAL    +M   GV P+ +++ ++L+ CS +G    G 
Sbjct: 859 IKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGL 918

Query: 570 RYFHMMQEEFGIKPH-------LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           + F  MQEE G+ P+       L+  GC+  L+         H+F     +  DA +  A
Sbjct: 919 KIFLKMQEE-GVSPNSATISSLLRILGCLSLLYSGKE----VHSFCLKNNLTRDAHVATA 973

Query: 623 LLGACRIHGNMELGA 637
           L+      G+++  A
Sbjct: 974 LVDMYAKSGDLQSAA 988


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/686 (36%), Positives = 380/686 (55%), Gaps = 28/686 (4%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G ++H ++LKLGF  D  +  +L+ MY + G   +A ++F  MP R+  SW A++ G+ +
Sbjct: 23  GAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLR 82

Query: 222 SGNAVEALDILDEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
            G+A E L +L  MR L  V+ +  T+++ L  C    ++ +G+ IH   V+ G E +  
Sbjct: 83  HGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHV 142

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-- 338
           V+N+L+ +Y+K G +  A RVFD  + R++V+WN++I+ Y  +     +   F  MQQ  
Sbjct: 143 VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRR 202

Query: 339 ---AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG-WFMEDVIIGNAVVDMYAKL 394
                 QPD  T  SL      L   R    VH  ++ RG     + I+  A++DMY K 
Sbjct: 203 QEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKC 262

Query: 395 G-IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
             ++  A  VF  L  K+ I W T+I G+AQ G   EA+E+F        +  +     S
Sbjct: 263 RCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSG-VRADGHVLSS 321

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           ++  ++    + QG ++H   +K     DV VA  L+DMY KCG  D+A   F +VP  +
Sbjct: 322 VVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARN 381

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V W A+I+  G HG G +A++ F +M  EGV PD + +++LL+ACSHSGLV E +RYF 
Sbjct: 382 VVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFS 441

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            ++ +  ++P  +HY CMVDL GRAG L  A + +  MP+ P   +W  LL ACR+H N+
Sbjct: 442 AIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNV 501

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
            +G  A + L  +D +N   YV++SNI+A  G W     VR   R RGL+K  G S +EV
Sbjct: 502 TVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWVEV 561

Query: 694 NNKVDIFY-TGNRTHPKYEKIYDELRNLTAKMKS-LGYVPD-----KSFVLQDVEEDEKE 746
             +   FY  G+ +HP+   I   LR++   M+  LGY P          L DV+E+ + 
Sbjct: 562 GKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDVDEESRA 621

Query: 747 HILTSHSERLAIAF------------GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
             L +HSERLA+              G+  +  K  I+++KNLRVCGDCH + K +S + 
Sbjct: 622 ESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGLSSVV 681

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
            R ++VRD+NRFH F+DG+CSC DYW
Sbjct: 682 GRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 240/508 (47%), Gaps = 35/508 (6%)

Query: 44  ESREIDFDDLFQSC--TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT 101
           E R++  D L  S   + +H   +LH  L+  G          L++ YA  G+L  +   
Sbjct: 2   ERRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEV 61

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---N 158
           F  +  RNV +W +++  ++R G   E +         S + P+ +T    LKAC    +
Sbjct: 62  FGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGD 121

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           +  G  IH + ++ GFE    VA SL+ +Y + G    AR++FD    R+  +WNAMISG
Sbjct: 122 MAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISG 181

Query: 219 YCQSGNAVEALDILDEMRL-----EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           Y  +G+  ++L +  EM+      E    D  T AS+L  C        G  +H  +V  
Sbjct: 182 YAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIR 241

Query: 274 GLEF--NLFVSNNLINMYAKFG-MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           G+    N  ++  L++MY K   ++  A++VF+++ +++ + W ++I  + Q      A 
Sbjct: 242 GVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAM 301

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F     +G++ D   L S+  + A        R VH + ++    + DV + N+++DM
Sbjct: 302 ELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGL-DVSVANSLIDM 360

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           Y K G+ + A   F  +P ++V+SW  +I G  ++G   EAI +F+ M     + P++  
Sbjct: 361 YHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEM-RAEGVEPDEVA 419

Query: 451 YVSILPAYSHVG----------ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
           Y+++L A SH G          A+R   ++  R              C+VD+ G+ G + 
Sbjct: 420 YLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHY---------ACMVDLLGRAGELS 470

Query: 501 DAMSLFYQVPRSSSVP-WNAIISCHGIH 527
           +A  L   +P + +V  W  ++S   +H
Sbjct: 471 EAKDLVATMPMAPTVGVWQTLLSACRVH 498



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 210/423 (49%), Gaps = 15/423 (3%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A +L   A S  I  G  +H  ++K G   +  + NNLI+MYAK G +R A  VF  M 
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           ER+VVSW +++  + +  D          M+  + + P+  TL +       + D     
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +HG  +R G F    ++ N++V +Y+K G I  A  VF+G   +++++WN +I+GYA  
Sbjct: 127 WIHGACVRAG-FEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185

Query: 426 GLASEAIEVFQMM----EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-- 479
           G   +++ VF+ M    +E  +  P++ T+ S+L A   +GA R+G ++HA ++   +  
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVST 245

Query: 480 CFDVFVATCLVDMYGKCG-RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
             +  +A  L+DMY KC   +  AM +F ++ + +++ W  +I  H   GQ  +A+  F 
Sbjct: 246 ASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           +    GVR D     S++   +   LV +G Q + + ++   G+   + +   ++D++ +
Sbjct: 306 RFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVAN--SLIDMYHK 363

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME--LGAVASDRLFEVDSENVGYYV 655
            G    A    + +P R   S W A++     HG+ +  +      R   V+ + V Y  
Sbjct: 364 CGLTDEAARRFREVPARNVVS-WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLA 422

Query: 656 LMS 658
           L+S
Sbjct: 423 LLS 425


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/608 (38%), Positives = 362/608 (59%), Gaps = 9/608 (1%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           IS  C +G   EAL    EM + G  +      ++L  C     +  G  +H +++K   
Sbjct: 26  ISQLCSNGRLQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
               ++   L+  Y K   +  A +V D+M E++VVSW ++I+ Y Q+     A   F  
Sbjct: 83  LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAE 142

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKL 394
           M ++  +P+  T  ++ +   + +     + +HG I++  W +   + +G++++DMYAK 
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVK--WNYDSHIFVGSSLLDMYAKA 200

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  A  +FE LP +DV+S   +I GYAQ GL  EA+E+FQ ++    + PN  TY S+
Sbjct: 201 GQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQS-EGMRPNYVTYASL 259

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S +  L  G + H  V++  L F   +   L+DMY KCG +  A  LF  +P  ++
Sbjct: 260 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTA 319

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQR-YF 572
           + WNA++  +  HG G + L  FR M DE  V+PD +T +++L+ CSH  +   G   Y 
Sbjct: 320 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYD 379

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            M+  E+GIKP  +HYGC+VD+ GRAG +  A  FI+ MP +P A + G+LLGACR+H +
Sbjct: 380 GMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLS 439

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           +++G     RL E++ EN G YV++SN+YA+ G+WE V+ VR++   + + K PG S I+
Sbjct: 440 VDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQ 499

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
               +  F+  +RTHP+ E++  +++ ++ KMK  GYVPD S VL DV+E++KE +L  H
Sbjct: 500 HEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGH 559

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SE+LA+ FG+I++    PI++FKNLR+C DCHN+ K  S++ ERE+ +RD NRFH    G
Sbjct: 560 SEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKG 619

Query: 813 ICSCGDYW 820
           ICSCGDYW
Sbjct: 620 ICSCGDYW 627



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 212/399 (53%), Gaps = 10/399 (2%)

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
           IS     GRL EA+          G    F+ +  +L AC   R L +G+++H  ++K  
Sbjct: 26  ISQLCSNGRLQEALLEMVML----GPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTR 81

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           +    ++   LL  Y +      ARK+ D+MP ++  SW AMIS Y Q+G++ EAL +  
Sbjct: 82  YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFA 141

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           EM       +  T A++L  C R+  +  G  IH  IVK   + ++FV ++L++MYAK G
Sbjct: 142 EMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 201

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  A  +F+ + ERDVVS  +IIA Y Q      A   F  +Q  G++P+ +T  SL +
Sbjct: 202 QIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLT 261

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
            ++ L    + +  H  ++RR       ++ N+++DMY+K G ++ A  +F+ +P +  I
Sbjct: 262 ALSGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAI 320

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SWN ++ GY+++GL  E +E+F++M +   + P+  T +++L   SH      G+ I+  
Sbjct: 321 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDG 380

Query: 474 VIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           ++     +  D     C+VDM G+ GRID+A     ++P
Sbjct: 381 MVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMP 419



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 223/457 (48%), Gaps = 16/457 (3%)

Query: 19  LLQAHRPLFSAAANS-LQISPDCLENESREIDF---DDLFQSC---TKLHHVKRLHALLV 71
           +LQ  RP+    +N  LQ +   +     EI F   D L  +C     L   +R+HA ++
Sbjct: 19  VLQTFRPISQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMI 78

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
            +  +   +  T+L+ FY     L  +R   D +  +NV +W +MIS Y + G  SEA+ 
Sbjct: 79  KTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALS 138

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMY 188
            F +   + G +P+ +TF  VL +C     L  GK+IH  ++K  ++  +FV +SLL MY
Sbjct: 139 VFAEMMRSDG-KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMY 197

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
            + G    AR++F+ +P RD  S  A+I+GY Q G   EAL++   ++ EG+  + +T A
Sbjct: 198 AKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYA 257

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S+L   +    +  G   H ++++  L F   + N+LI+MY+K G + +A R+FD M ER
Sbjct: 258 SLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPER 317

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
             +SWN+++  Y +          F  M+ +  ++PD +TL+++ S  +         S+
Sbjct: 318 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSI 377

Query: 368 H-GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           + G +        D      +VDM  + G I+ A    + +P K        + G  +  
Sbjct: 378 YDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 437

Query: 427 LASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           L+ +  E   +     EI P N G YV +   Y+  G
Sbjct: 438 LSVDIGEY--VGHRLIEIEPENAGNYVILSNLYASAG 472


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/694 (37%), Positives = 400/694 (57%), Gaps = 21/694 (3%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  L+ V   + +H  +   G    VF  + L+ FY+  G +  +R+ FD + 
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            ++   WN M++ YV+ G    A   F +   T    P+  TF  VL  C + +    G 
Sbjct: 210 SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE-TNPNSVTFACVLSVCASEIMINFGS 268

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+  G E D  VA +LL MY + G    AR+LFD MP  D  +WN MISGY Q+G
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EA  +  EM    +  D IT +S LP+ +    +  G  IH YI+++G+  ++F+ +
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI++Y K   +  A ++FDQ    D+V   ++I+ Y  +     A   F  + Q  ++ 
Sbjct: 389 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TL S+    A L      + +HG I++ G       +G+A++DMYAK G ++ A   
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNG-HGGSCYVGSAIMDMYAKCGRLDLAHQT 507

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME------ECNEINPNQGTYVSILPA 457
           F G+  KD + WN++IT  +QNG   EAI++F+ M       +C  I+       + L A
Sbjct: 508 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSIS-------AALSA 560

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +++ AL  G +IHA +++     D+F  + L+DMY KCG +D A  +F  +   + V W
Sbjct: 561 CANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSW 620

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           N+II+ +G HG+   +LN F  ML +G++PDH+TF+++++AC H+G V EG  YF  M E
Sbjct: 621 NSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTE 680

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           E GI   ++HY CMVDLFGRAG L  A   I +MP  PDA +WG LLGACR+HGN+EL  
Sbjct: 681 ELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAE 740

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
           VAS  LF++D +N GYYVL+SN++AN G+WE V ++RSL ++RG++K PG S I+VNN  
Sbjct: 741 VASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTT 800

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +F   +R+HP+  +IY  L+NL  +++  GYVP
Sbjct: 801 HMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 834



 Score =  291 bits (745), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 180/588 (30%), Positives = 306/588 (52%), Gaps = 11/588 (1%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + Q+CT    L   ++ HA ++V+G        TKL+  Y   G    +++ F  +    
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
              WN MI  +   G+   A+  FY   L  G  PD YTFP V+KAC  L     G+ +H
Sbjct: 112 SEPWNWMIRGFTMMGQFDFAL-LFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             +  +GFE DVFV +SL+  Y   G  + AR LFD MP +D   WN M++GY ++G+  
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            A  +  EMR    + + +T A +L VCA    I  G  +H  +V  GLE +  V+N L+
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLL 290

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MYAK G +  A R+FD M + D+V+WN +I+ Y Q+     A   F  M  A ++PD +
Sbjct: 291 AMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSI 350

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T  S   ++++    R  + +H +I+R G  + DV + +A++D+Y K   +  A  +F+ 
Sbjct: 351 TFSSFLPLLSEGATLRQGKEIHCYIIRNGVSL-DVFLKSALIDIYFKCRDVEMARKIFDQ 409

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
               D++    +I+GY  NG+ + A+E+F+ + +   +  N  T  S+LPA + + AL  
Sbjct: 410 RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ-ERMRANSVTLASVLPACAGLAALTL 468

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G ++H  ++KN      +V + ++DMY KCGR+D A   F  +    +V WN++I+    
Sbjct: 469 GKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ 528

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           +G+ ++A++ FRQM   G + D ++  + L+AC++   +  G+   H        +  L 
Sbjct: 529 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE-IHAFMMRGAFRSDLF 587

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
               ++D++ + G+L +A      M  + + S W +++ A   HG ++
Sbjct: 588 AESALIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNHGRLK 634



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 172/369 (46%), Gaps = 6/369 (1%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + SIL  C     +  G   H  ++ +G+ +N  +   L+ MY   G    A  +F Q+ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
                 WN +I  +        A  F+  M   G  PD  T   +      LN     R 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH  I   G F  DV +G++++  Y++ G I+ A  +F+ +P KD + WN ++ GY +NG
Sbjct: 169 VHDKIQFMG-FELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNG 227

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
               A  VF  M    E NPN  T+  +L   +    +  G ++H  V+ + L  D  VA
Sbjct: 228 DWDNATGVFMEMRR-TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
             L+ MY KCG + DA  LF  +P++  V WN +IS +  +G  D+A   F +M+   ++
Sbjct: 287 NTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMK 346

Query: 547 PDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           PD ITF S L   S    + +G+  + ++++    +   LK    ++D++ +   + MA 
Sbjct: 347 PDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLK--SALIDIYFKCRDVEMAR 404

Query: 606 N-FIQNMPV 613
             F Q  PV
Sbjct: 405 KIFDQRTPV 413



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 4/209 (1%)

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           VSIL   +    L QG + HA+++ N + ++  + T L+ MY  CG   DA ++FYQ+  
Sbjct: 50  VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
             S PWN +I    + GQ D AL F+ +ML  G  PD  TF  ++ AC     V+ G R 
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG-RV 168

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H   +  G +  +     ++  +   G +  A      MP + D  +W  +L     +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLNGYVKNG 227

Query: 632 NME--LGAVASDRLFEVDSENVGYYVLMS 658
           + +   G     R  E +  +V +  ++S
Sbjct: 228 DWDNATGVFMEMRRTETNPNSVTFACVLS 256


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 228/577 (39%), Positives = 359/577 (62%), Gaps = 4/577 (0%)

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T   +L  CA S  +L G  +H  +VK G   +  ++N LI MY K G +  A  VFDQ+
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 306 MER--DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            E+  DV+SWN II AY Q+     A   F TM   G+  + +TL++     A L     
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R VH   + +     D ++G ++V+M+ K   +++A AVF+ LP K++++WN ++  Y+
Sbjct: 146 GRIVHAIAVDK-RLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           QN    +AI+VF+ M+    + P+  T+++I+ A + + A  +G  +H  +  + +  DV
Sbjct: 205 QNWQCKKAIQVFRFMD-LEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDV 263

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
            + T ++  YGKCGR+D+A ++F  + + ++V W+AI++ +  +G   +A+  + +M+  
Sbjct: 264 ALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQG 323

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           G+  + ITF+ LL ACSH+G   +G  YF  M  +FG+ P  +HY  ++DL GR+G L +
Sbjct: 324 GLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQL 383

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           + + I +MP  PD+S W ALLGACR+HG+++ GA  ++ ++E+D E+ G Y+L+SN+Y++
Sbjct: 384 SEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSS 443

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAK 723
            G+ +     R   R RG+ K PG SSIEV ++V  F    + HP+  +I+ E+  L A+
Sbjct: 444 TGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKAR 503

Query: 724 MKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           +K  GYV D   VL+DVEE+EKE +L  HSERLAIAFG+IS+PP + + I KNLRVC DC
Sbjct: 504 VKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDC 563

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H   K IS++  R+I+VRD+ RFHHF++G CSCGDYW
Sbjct: 564 HAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 224/441 (50%), Gaps = 10/441 (2%)

Query: 143 RPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           R +  T+  +LK C   + L++GK++H  ++K G+  D  +A  L+ MY + G    AR 
Sbjct: 21  REEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARS 80

Query: 200 LFDDMPVRDSG--SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           +FD +  +++   SWN +I  Y Q+G   EAL +   M LEGV  + +T+ + +  CA  
Sbjct: 81  VFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASL 140

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            +   G ++H   V   LE +  V  +L+NM+ K   +  A  VFD +  +++V+WN+++
Sbjct: 141 PSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMV 200

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y Q+     A   F  M   G+QPD +T +++    A L      R VH  I   G  
Sbjct: 201 AVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIP 260

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           M DV +G AV+  Y K G +++A A+F+ L  K+ ++W+ ++  YAQNG  +EAIE++  
Sbjct: 261 M-DVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHE 319

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC-LVDMYGKC 496
           M +   +  N  T++ +L A SH G    G+     +I++     VF     L+D+ G+ 
Sbjct: 320 MVQGG-LEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRS 378

Query: 497 GRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           G++  +  L   +P    S  W A++    +HG  D+      +++ E    D   ++ L
Sbjct: 379 GQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGAR-IAELIYELDPEDSGPYILL 437

Query: 556 LTACSHSGLVSEGQRYFHMMQ 576
               S +G + E +R    M+
Sbjct: 438 SNLYSSTGRMDEARRTRKAMR 458



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 197/413 (47%), Gaps = 15/413 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN--VYTWNSMISVYV 121
           KR+H+ LV  G       +  L+  Y   G ++ +R  FD I  +N  V +WN +I  Y 
Sbjct: 44  KRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYT 103

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDV 178
           + G   EA+  F    L  G+  +  T    + AC +L    +G+ +H   +    E D 
Sbjct: 104 QNGLGKEALHLFKTMDL-EGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDT 162

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V  SL++M+ +    + AR +FD +P ++  +WN M++ Y Q+    +A+ +   M LE
Sbjct: 163 MVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLE 222

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           GV  D +T  +I+  CA       G ++H  I   G+  ++ +   +++ Y K G + +A
Sbjct: 223 GVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNA 282

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +FD + +++ V+W++I+AAY Q+     A   +  M Q G++ + +T + L  + A  
Sbjct: 283 RAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGL--LFACS 340

Query: 359 NDCRNSRSVHGFI-MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISW 415
           +  R+   V  F+ M R + +  V      ++D+  + G +  +  +   +P + D  +W
Sbjct: 341 HAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAW 400

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQG 467
             L+     +G       + +++    E++P + G Y+ +   YS  G + + 
Sbjct: 401 LALLGACRMHGDVDRGARIAELI---YELDPEDSGPYILLSNLYSSTGRMDEA 450


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/581 (39%), Positives = 363/581 (62%), Gaps = 7/581 (1%)

Query: 243 DPIT-VASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLI-NMYAKFGMMRHAL 299
           +P+T   S+L  CA S + L    IH + ++HG+  N   +  +LI  + +    M +A 
Sbjct: 15  NPLTKCISLLQFCASSKHKLKQ--IHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAY 72

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            VF  +   +V +WN+II  Y +S++P  A  F+  M  + ++PD  T   L   +++  
Sbjct: 73  NVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSL 132

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           + R   ++H   +R G F   V + N+++ +YA  G   SA  VFE +  +D+++WN++I
Sbjct: 133 NVREGEAIHSVTIRNG-FESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMI 191

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            G+A NG  +EA+ +F+ M     + P+  T VS+L A + +GAL  G ++H  ++K  L
Sbjct: 192 NGFALNGRPNEALTLFREMS-VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGL 250

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             +  V   L+D+Y KCG I +A  +F ++   ++V W ++I    ++G G++AL  F++
Sbjct: 251 SKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKE 310

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M  +G+ P  ITFV +L ACSH G++ EG  YF  M+EE GI P ++HYGCMVDL  RAG
Sbjct: 311 MEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAG 370

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            +  A+ +IQNMPV+P+A IW  LLGAC IHG++ LG +A   L  ++ ++ G YVL+SN
Sbjct: 371 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSN 430

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           +YA+  +W  V  +R      G+KKTPG+S +E+ N+V  F  G+R+HP+ + +Y  L  
Sbjct: 431 LYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEK 490

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           +T  +K  GYVP  + VL D+EE+EKE  L+ HSE++AIAF ++++PP +PI++ KNLRV
Sbjct: 491 ITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRV 550

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           C DCH   K I++I +REI++RD +RFHHF+ G CSC DYW
Sbjct: 551 CADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/381 (32%), Positives = 195/381 (51%), Gaps = 20/381 (5%)

Query: 52  DLFQSC-TKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANL-GDLSFSRHTFDHISYR 108
            L Q C +  H +K++HA  +  G  +        L+    +L   +S++ + F  I   
Sbjct: 22  SLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNP 81

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKI 165
           NV+TWN++I  Y      S A   FY+  + S + PD +T+P +LKA     N+ +G+ I
Sbjct: 82  NVFTWNTIIRGYAESDNPSPAF-LFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H   ++ GFE  VFV  SLLH+Y   G    A K+F+ M  RD  +WN+MI+G+  +G  
Sbjct: 141 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRP 200

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EAL +  EM +EGV  D  TV S+L   A    +  G  +H+Y++K GL  N  V+N+L
Sbjct: 201 NEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSL 260

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +++YAK G +R A RVF +M ER+ VSW S+I     +     A   F  M+  G+ P  
Sbjct: 261 LDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSE 320

Query: 346 LTLVSLTSIVAQLNDCRNSRSV-HGFIMRRGWFMEDVIIG-----NAVVDMYAKLGIINS 399
           +T V +      L  C +   +  GF   R    E  II        +VD+ ++ G++  
Sbjct: 321 ITFVGV------LYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQ 374

Query: 400 ACAVFEGLPVK-DVISWNTLI 419
           A    + +PV+ + + W TL+
Sbjct: 375 AYEYIQNMPVQPNAVIWRTLL 395


>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/471 (46%), Positives = 328/471 (69%), Gaps = 5/471 (1%)

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI--INSACAVFEGLPVK 410
           S  A++ D   + S+H  I + G F  +  + N ++D YAK G   +  A  VF+ +  +
Sbjct: 206 SASARVPDRGVTASLHALIAKIG-FERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-R 263

Query: 411 DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           DV+SWN++I  YAQNG+++EAI ++ +M+     I  N     ++L A +H GA++ G +
Sbjct: 264 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR 323

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH +V++  L  +V+V T +VDMY KCGR++ A   F ++   + + W+A+I+ +G+HG+
Sbjct: 324 IHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGR 383

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +AL  F +M   G+RP++ITF+S+L ACSH+GL+ EG+ +++ M++EFGI+  ++HYG
Sbjct: 384 GQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG 443

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GRAG L  A++ I+ M V+PDA+IWGALL ACRIH N+EL  ++  RLFE+D+ 
Sbjct: 444 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDAS 503

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           N GYYVL+SNIYA    W+ V+ +R L + R ++K PG+SS E+  K+ +FY G+++HP+
Sbjct: 504 NSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQ 563

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
           + +IY  L  L  +M+  GYVP+   VL D++E+EKE  L  HSE+LA+AF +++S P+S
Sbjct: 564 HIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRS 623

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I I KNLRVC DCH   KFI++ITEREII+RD  RFHHFKDG+CSC DYW
Sbjct: 624 VIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 143/262 (54%), Gaps = 6/262 (2%)

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDSGSWNAMISGYCQS 222
           +H  + K+GFE +  V  ++L  Y + G  +  VARK+FD M  RD  SWN+MI+ Y Q+
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQN 278

Query: 223 GNAVEALDILDEMR--LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           G + EA+ +  +M     G+  + + ++++L  CA +  I +G  IH  +V+ GLE N++
Sbjct: 279 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVY 338

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  ++++MY+K G +  A R F ++ E++++SW+++I  Y        A   FT M+++G
Sbjct: 339 VGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSG 398

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++P+ +T +S+ +  +        R  +  + +       V     +VD+  + G ++ A
Sbjct: 399 LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEA 458

Query: 401 CAVFEGLPVK-DVISWNTLITG 421
            ++ + + VK D   W  L++ 
Sbjct: 459 YSLIKEMKVKPDAAIWGALLSA 480



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 138/262 (52%), Gaps = 9/262 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLG--DLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           LHAL+   G  +       +++ YA  G  DL  +R  FD +  R+V +WNSMI++Y + 
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQN 278

Query: 124 GRLSEAVDCFYQ-FTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
           G  +EA+  + +   +  G++ +      VL AC +   +  GK+IH  V+++G E +V+
Sbjct: 279 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVY 338

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  S++ MY + G   +A + F  +  ++  SW+AMI+GY   G   EAL+I  EM+  G
Sbjct: 339 VGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSG 398

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHA 298
           +  + IT  S+L  C+ +  +  G   +  + +  G+E  +     ++++  + G +  A
Sbjct: 399 LRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEA 458

Query: 299 LRVFDQM-MERDVVSWNSIIAA 319
             +  +M ++ D   W ++++A
Sbjct: 459 YSLIKEMKVKPDAAIWGALLSA 480



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 7/173 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           KR+H  +V  G  + V+  T +V+ Y+  G +  +   F  I  +N+ +W++MI+ Y   
Sbjct: 322 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 381

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK--LGFEWDVF 179
           GR  EA++ F +    SGLRP++ TF  VL AC +  L+D  +   + +K   G E  V 
Sbjct: 382 GRGQEALEIFTEMK-RSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVE 440

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDI 231
               ++ +  R G  + A  L  +M V+ D+  W A++S  C+    VE  ++
Sbjct: 441 HYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA-CRIHKNVELAEM 492



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 103/216 (47%), Gaps = 8/216 (3%)

Query: 421 GYAQNGLASEAIEVFQMMEECNEIN-PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           GY +N L   ++E+F+ M   +  +  ++   +    A + V        +HA + K   
Sbjct: 170 GYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGF 229

Query: 480 CFDVFVATCLVDMYGKCGR--IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
             +  V   ++D Y K G   ++ A  +F  + R   V WN++I+ +  +G   +A+  +
Sbjct: 230 ERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSAEAIGLY 288

Query: 538 RQMLD--EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            +ML+   G++ + +   ++L AC+H+G +  G+R  H      G++ ++     +VD++
Sbjct: 289 SKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKR-IHNQVVRMGLEENVYVGTSIVDMY 347

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            + G + MA    + +  +   S W A++    +HG
Sbjct: 348 SKCGRVEMASRAFRKIKEKNILS-WSAMITGYGMHG 382


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/690 (36%), Positives = 412/690 (59%), Gaps = 11/690 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  L++V   K +H L    G    +F  + L+  Y + G +  +++ FD + 
Sbjct: 180 FPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELP 239

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVD-GK 163
            R+   WN M++ YV+ G  + A+  F Q    S ++P+  +F  +L  C  R +V  G 
Sbjct: 240 VRDCILWNVMLNGYVKNGDFNSALGTF-QEMRNSCVKPNSVSFVCLLSVCATRGIVRAGI 298

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V++ GFE D  VA +++ MY + G    ARK+FD MP  D+ +WN +I+GY Q+G
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EA+ +   M   GV +D IT AS LP   +S ++     +H YIV+HG+ F++++ +
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+++Y K G +  A + F Q    DV    ++I+ Y  +   + A   F  + Q G+ P
Sbjct: 419 ALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVP 478

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACA 402
           + LT+ S+    A L   +  + +H  I+++G  +E+V  +G+++  MYAK G ++ A  
Sbjct: 479 NCLTMASVLPACAALASLKLGKELHCDILKKG--LENVCQVGSSITYMYAKSGRLDLAYQ 536

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F  +PVKD + WN +I  ++QNG    AI++F+ M   +    +  +  + L A ++  
Sbjct: 537 FFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGT-SGTKFDSVSLSATLSACANYP 595

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G ++H  V++N    D FVA+ L+DMY KCG++  A S+F  +   + V WN+II+
Sbjct: 596 ALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIA 655

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G HG+  + L+ F +M++ G++PDH+TF+ +++AC H+GLV EG  YF  M EE+GI 
Sbjct: 656 AYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGIC 715

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
             ++H+ CMVDL+GRAG L  A + I++MP  PDA  WG+LLGACR+HGN+EL  +AS  
Sbjct: 716 ARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKH 775

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E+D  N GYYVL+SN++A  G+WE V +VRSL +++G++K PG+S I+VN    +F  
Sbjct: 776 LVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSA 835

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
            +  HP+  +IY  L+NL  +++  GYVP 
Sbjct: 836 ADGCHPQSVEIYLILKNLLLELRKHGYVPQ 865



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 186/678 (27%), Positives = 330/678 (48%), Gaps = 27/678 (3%)

Query: 61  HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
             V+++HA ++V G   ++   ++++  Y          + F  +       WN +I  +
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWD 177
              G    A+  F++  L S + PD YTFP V+KAC    N+   K +H     +GF  D
Sbjct: 153 SMLGCFDFALMFFFRM-LGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMD 211

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
           +F+ +SL+ +Y   G  + A+ LFD++PVRD   WN M++GY ++G+   AL    EMR 
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
             V  + ++   +L VCA    + +G+ +H  +++ G E +  V+N +I MY+K G +  
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A ++FD M + D V+WN +IA Y Q+     A   F  M  +G++ D +T  S    V +
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
               +  + VH +I+R G    DV + +A+VD+Y K G +  AC  F+   + DV     
Sbjct: 392 SGSLKYCKEVHSYIVRHG-VPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTA 450

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I+GY  NGL  EA+ +F+ + +   + PN  T  S+LPA + + +L+ G ++H  ++K 
Sbjct: 451 MISGYVLNGLNVEALNLFRWLIQEGMV-PNCLTMASVLPACAALASLKLGKELHCDILKK 509

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            L     V + +  MY K GR+D A   F ++P   SV WN +I     +G+ + A++ F
Sbjct: 510 GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLF 569

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           RQM   G + D ++  + L+AC++   +  G+   H                 ++D++ +
Sbjct: 570 RQMGTSGTKFDSVSLSATLSACANYPALYYGKE-LHCFVVRNSFISDTFVASTLIDMYSK 628

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYV 655
            G L +A +    M  + + S W +++ A   HG           + E  +  ++V + V
Sbjct: 629 CGKLALARSVFDMMDWKNEVS-WNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLV 687

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGL-KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           +MS         EG+   R +  + G+  +   ++ +     VD++    R H  ++ I 
Sbjct: 688 IMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACM-----VDLYGRAGRLHEAFDTI- 741

Query: 715 DELRNLTAKMKSLGYVPD 732
                     KS+ + PD
Sbjct: 742 ----------KSMPFTPD 749


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/663 (36%), Positives = 380/663 (57%), Gaps = 7/663 (1%)

Query: 162 GKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+ IH  +++        F++  L++MY +  L N A+ +     +R   +W ++ISG  
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
            +   + AL     MR + V  +  T   +    A     ++G  IH   +K G+ +++F
Sbjct: 85  HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +  +MY K G    A  +FD+M +R++ +WN+ I+   Q    + A   F       
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            +P+ +T  +  +    +      R +H FI+R G + EDV + N ++D Y K G I SA
Sbjct: 205 GEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCG-YKEDVSVANGLIDFYGKCGDIVSA 263

Query: 401 CAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
             VF  +   K+V+SW +++    QN     A  VF  ++   E+ P      S+L A +
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVF--LQARKEVEPTDFMISSVLSACA 321

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +G L  G  +HA  +K C+  ++FV + LVDMYGKCG I++A  +F ++P  + V WNA
Sbjct: 322 ELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNA 381

Query: 520 IISCHGIHGQGDKALNFFRQML--DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +I  +   G  D AL  F +M     G+RP ++T +S+L+ CS  G V  G + F  M+ 
Sbjct: 382 MIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRL 441

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            +GI+P  +H+ C+VDL GR+G +  A+ FIQNM ++P  S+WGALLGACR+HG  ELG 
Sbjct: 442 NYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGK 501

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
           +A+++LFE+D  + G +V++SN+ A+ G+WE    VR   +D G+KK  G+S I V N++
Sbjct: 502 IAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRI 561

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
            +F   + +H +  +I   L  L   MK  GYVPD +  L D+E++EK   +  HSE++A
Sbjct: 562 HVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIA 621

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +AFG+I+ P   PI+I KNLR+CGDCH+  KFIS+I  REIIVRD++RFH FKDG CSC 
Sbjct: 622 LAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCK 681

Query: 818 DYW 820
           DYW
Sbjct: 682 DYW 684



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 241/480 (50%), Gaps = 22/480 (4%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           H+ R H   + S      F S  LVN Y+ L  L+ ++H       R V TW S+IS  V
Sbjct: 31  HIIRTHVTPLPS------FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDV 178
              R   A+  F        ++P+ +TFP V KA   +   + GK+IH   LK G  +DV
Sbjct: 85  HNRRFLPALLHFTNMR-RDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV  S   MYC+ G    A  +FD+MP R+  +WNA IS   Q   +++A+    E    
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
               + IT  + L  C     +  G  +H +IV+ G + ++ V+N LI+ Y K G +  A
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSA 263

Query: 299 LRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
             VF+++  R +VVSW S++AA  Q+++   A   F   ++  ++P    + S+ S  A+
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAE 322

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L      RSVH   + +    +++ +G+A+VDMY K G I +A  VF  LP +++++WN 
Sbjct: 323 LGGLELGRSVHALAV-KACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNA 381

Query: 418 LITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           +I GYA  G    A+ +F+ M    + I P+  T +SIL   S VGA+ +GI+I   +  
Sbjct: 382 MIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRL 441

Query: 477 NCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGD 531
           N   + +        C+VD+ G+ G +D A      +    ++  W A++    +HG+ +
Sbjct: 442 N---YGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTE 498



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 13/291 (4%)

Query: 40  CLENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C+  E   I F     +C    +L+  ++LHA +V  G  + V  +  L++FY   GD+ 
Sbjct: 202 CVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIV 261

Query: 97  FSRHTFDHISYR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
            +   F+ I  R NV +W SM++  V+      A   F Q      + P  +    VL A
Sbjct: 262 SAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ--ARKEVEPTDFMISSVLSA 319

Query: 156 CRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           C  L     G+ +H   +K   E ++FV ++L+ MY + G    A ++F ++P R+  +W
Sbjct: 320 CAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTW 379

Query: 213 NAMISGYCQSGNAVEALDILDEMRL--EGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           NAMI GY   G+   AL + +EM L   G+    +T+ SIL VC+R   +  G+ I   +
Sbjct: 380 NAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESM 439

Query: 271 -VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS-WNSIIAA 319
            + +G+E        ++++  + G++  A      M  +  +S W +++ A
Sbjct: 440 RLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGA 490



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 10/206 (4%)

Query: 42  ENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           E E  +     +  +C +L  +   + +HAL V +     +F  + LV+ Y   G +  +
Sbjct: 305 EVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENA 364

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACR 157
              F  +  RN+ TWN+MI  Y   G +  A+  F + TL S G+RP + T   +L  C 
Sbjct: 365 EQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCS 424

Query: 158 N---LVDGKKIHCSV-LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-W 212
               +  G +I  S+ L  G E      A ++ +  R GL + A +   +M ++ + S W
Sbjct: 425 RVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVW 484

Query: 213 NAMISGYCQSGNAVEALDILDEMRLE 238
            A++ G C+     E   I  E   E
Sbjct: 485 GALL-GACRMHGKTELGKIAAEKLFE 509


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/578 (40%), Positives = 361/578 (62%), Gaps = 13/578 (2%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGL-----EFNLFVSNNLINMYAKFGMMRHALRVFD 303
           S++ +C  S + L    IH + ++HG+     +FN  +   L+++ A    M  A ++F+
Sbjct: 39  SLVQLCGSSQSKLKQ--IHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFN 93

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCR 362
           Q+   ++ +WN++I  + +S +P  A   F+ M  A  I PD  T   L   VA+L D  
Sbjct: 94  QIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVS 153

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               +H  ++R G F     + N++V MY+  G   SA  VFE +  +D ++WN++I G+
Sbjct: 154 LGEGIHSVVVRNG-FDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGF 212

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           A NG+ +EA+ +++ M     + P+  T VS+L A   +GAL  G ++H  ++K  L  +
Sbjct: 213 ALNGMPNEALTLYREMGS-EGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQN 271

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
              +  L+D+Y KCG   DA  +F ++   S V W ++I    ++G G++AL  F ++  
Sbjct: 272 QHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELER 331

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           +G++P  ITFV +L ACSH G++ EG  YF  M+EE+GI P ++H+GCMVDL  RAG +G
Sbjct: 332 QGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVG 391

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+++I+NMPV P+A IW  LLGAC IHG++ELG VA   +  ++  + G +VL+SN+YA
Sbjct: 392 DAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYA 451

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
           +  +W  V  VR +   +G+KKTPG+S +E+ N+V  F  G+R+HP+ E+ Y  L  +T 
Sbjct: 452 SERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQ 511

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
            +K  GYVP    VL D+EE+EKE  L+ H+E++AIAF ++++PP +PI+I KNLRVC D
Sbjct: 512 LLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCAD 571

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH   K IS++ EREIIVRD +RFHHFKDG CSC DYW
Sbjct: 572 CHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 18/343 (5%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           +SF+   F+ I   N++TWN+MI  +      S AV+ F Q    S + PD +TFP + K
Sbjct: 85  MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFK 144

Query: 155 ACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           A   L+D   G+ IH  V++ GF+   FV  SL+HMY  FG A  A ++F+ M  RD  +
Sbjct: 145 AVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVA 204

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN++I+G+  +G   EAL +  EM  EGV  D  T+ S+L  C     +  G  +H+Y+V
Sbjct: 205 WNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMV 264

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K GL  N   SN L+++Y+K G  R A +VFD+M ER VVSW S+I     +     A  
Sbjct: 265 KVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALK 324

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQ-------LNDCRNSRSVHGFIMRRGWFMEDVIIG 384
            F  +++ G++P  +T V +    +         N  R  +  +G + R       +   
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPR-------IEHH 377

Query: 385 NAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNG 426
             +VD+  + G +  A      +PV  + + W TL+     +G
Sbjct: 378 GCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 14/236 (5%)

Query: 26  LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSS 82
           LFS    +  I PD          F  LF++  KL  V   + +H+++V +G     F  
Sbjct: 122 LFSQMHAASSILPDTH-------TFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQ 174

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
             LV+ Y+  G    +   F+ +SYR+   WNS+I+ +   G  +EA+   Y+   + G+
Sbjct: 175 NSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEAL-TLYREMGSEGV 233

Query: 143 RPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
            PD +T   +L AC     L  G+++H  ++K+G   +   + +LL +Y + G    A+K
Sbjct: 234 EPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQK 293

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           +FD+M  R   SW ++I G   +G   EAL +  E+  +G+    IT   +L  C+
Sbjct: 294 VFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 26/185 (14%)

Query: 52  DLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
            L  +C +L  +   +R+H  +V  G ++   +S  L++ Y+  G+   ++  FD +  R
Sbjct: 242 SLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEER 301

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           +V +W S+I      G  +EA+  F +     GL+P   TF  VL AC         HC 
Sbjct: 302 SVVSWTSLIVGLAVNGLGNEALKLFGELE-RQGLKPSEITFVGVLYACS--------HCG 352

Query: 169 VLKLGF--------EWDVFVA----ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAM 215
           +L  GF        E+ +         ++ + CR G    A     +MPV  +   W  +
Sbjct: 353 MLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTL 412

Query: 216 ISGYC 220
           + G C
Sbjct: 413 L-GAC 416


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/674 (36%), Positives = 382/674 (56%), Gaps = 37/674 (5%)

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG-V 240
           AS+L  + R    + AR +FD+ P R +  W   ISG  + G   + +    EM  EG  
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           + +   +A+++  CA   ++ SG  +H +++++G+  ++ + N +++MYAK G    A R
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF-------TT------------------ 335
           VF  M ERD VSWN  I A  QS D + +   F       TT                  
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 336 ------MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
                 M QAG+  +  T  +   +   L      R +HG ++       D  + ++++D
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAA-LEGDAFVRSSLMD 287

Query: 390 MYAKLGIINSACAVFEGLP--VKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           MY K G++ +A +VF+      +D+  +W+T++ GY QNG   EA+++F+ M     +  
Sbjct: 288 MYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLR-EGVAA 346

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           ++ T  S+  A ++VG + QG ++H  V K     D  +A+ +VDMY KCG ++DA S+F
Sbjct: 347 DRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIF 406

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            +    +   W +++  +  HGQG  A+  F +M  E + P+ IT V +L+ACSH GLVS
Sbjct: 407 DRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVS 466

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG+ YF  MQEE+GI P ++HY C+VDL+GR+G L  A NFI+   +  +A +W  LL A
Sbjct: 467 EGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSA 526

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR+H + E   +AS++L +++  + G YV++SNIYA   KW    E+R   ++R ++K P
Sbjct: 527 CRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQP 586

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S I + N V  F  G+ +HP+  +IY  L  L  ++K +GY      V+ DVE++++E
Sbjct: 587 GRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRE 646

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
             L  HSE+LAIAFGIIS+P  +P++IFKNLRVC DCH   K+IS  T REI+VRD  RF
Sbjct: 647 TALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRF 706

Query: 807 HHFKDGICSCGDYW 820
           HHFKD  CSC D+W
Sbjct: 707 HHFKDASCSCEDFW 720



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 230/489 (47%), Gaps = 43/489 (8%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           ++ F+        +R  FD    R    W   IS   R GR ++ +  F +        P
Sbjct: 51  VLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATP 110

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           + +    V++ C  + D   GK++H  +L+ G   DV +  ++L MY + G    AR++F
Sbjct: 111 NAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVF 170

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN-- 259
             M  RD+ SWN  I    QSG+ + ++ + DE  L   +     ++ ++     +D   
Sbjct: 171 GAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALS 230

Query: 260 ---------------------ILSGLL--------IHLYIVKHGLEFNLFVSNNLINMYA 290
                                +L+G+L        +H  ++   LE + FV ++L++MY 
Sbjct: 231 HLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYC 290

Query: 291 KFGMMRHALRVFDQM--MERDV-VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           K G++  A  VFD    + RD+  +W++++A Y Q+     A   F  M + G+  D  T
Sbjct: 291 KCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFT 350

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           L S+ +  A +      R VHG +  + W+  D  + +A+VDMYAK G +  A ++F+  
Sbjct: 351 LTSVAAACANVGMVEQGRQVHGCV-EKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA 409

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             K++  W +++  YA +G    AIE+F+ M    ++ PN+ T V +L A SHVG + +G
Sbjct: 410 CTKNIAVWTSMLCSYASHGQGRIAIELFERM-TAEKMTPNEITLVGVLSACSHVGLVSEG 468

Query: 468 IKIHARVIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCH 524
            +++ + ++    +   +    C+VD+YG+ G +D A +   +      ++ W  ++S  
Sbjct: 469 -ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSAC 527

Query: 525 GIHGQGDKA 533
            +H   + A
Sbjct: 528 RLHQHNEYA 536



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 20/418 (4%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           D++  C +    +R+   +      +   S    +      GD+  S   FD    R+  
Sbjct: 155 DMYAKCGQFERARRVFGAMAE----RDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTT 210

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP--VLKACRNLVD-GKKIHCS 168
           +WN++IS  +R G  ++A+    +    +G+  + YT+    VL     L D G+++H  
Sbjct: 211 SWNTIISGLMRSGHAADALSHLRRMA-QAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGR 269

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSG-SWNAMISGYCQSGNA 225
           VL    E D FV +SL+ MYC+ GL   A  +FD      RD   +W+ M++GY Q+G  
Sbjct: 270 VLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGRE 329

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EALD+   M  EGV+ D  T+ S+   CA    +  G  +H  + K   + +  +++ +
Sbjct: 330 EEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAI 389

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MYAK G +  A  +FD+   +++  W S++ +Y        A   F  M    + P+ 
Sbjct: 390 VDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNE 449

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +TLV + S  + +            +      +  +   N +VD+Y + G+++ A    E
Sbjct: 450 ITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIE 509

Query: 406 GLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
              +  + I W TL++    +  N  A  A E    +E+C     + G+YV +   Y+
Sbjct: 510 ENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQC-----DAGSYVMLSNIYA 562


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/572 (40%), Positives = 351/572 (61%), Gaps = 3/572 (0%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S+L  C  S  +  G  +H      G+ +N  ++  L+++YA    + +A  +FD++ ++
Sbjct: 52  SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           ++  WN +I  Y  +     A   +  M   G++PD  TL  +    + L+     RS+H
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            ++++ GW   D+ +G A++DMYAK G +  A  VF+ + V+D + WN+++  YAQNG  
Sbjct: 172 EYVIKSGW-ERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            E+I + + M   N + P + T V+++ + + V  L  G +IH    ++    +  V T 
Sbjct: 231 DESISLCREMA-ANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTA 289

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           L+DMY KCG +  A++LF ++     V WNAII+ + +HG    AL+ F +M  E  RPD
Sbjct: 290 LIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPD 348

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
           HITFV +L ACS   L+ EG+  +++M  ++GI P ++HY CM+DL G  G L  A++ I
Sbjct: 349 HITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLI 408

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           +NM V+PD+ +WGALL +C+IHGN+EL  +A ++L E++ ++ G YV+++N+YA  GKWE
Sbjct: 409 RNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWE 468

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
           GV+++R +  D+ +KK    S IEV NKV  F  G+ +H   + IY EL+ L   M   G
Sbjct: 469 GVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAG 528

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           Y PD   V  DVEEDEK  ++ SHSERLAIAFG+IS+ P + + I KNLR+C DCH   K
Sbjct: 529 YAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIK 588

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FIS+I EREI VRD NR+H FK G+CSCGD+W
Sbjct: 589 FISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 220/407 (54%), Gaps = 10/407 (2%)

Query: 147 YTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           Y +  +L++C   + L  GK++H     LG  ++  +A  L+H+Y        AR LFD 
Sbjct: 48  YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           +P ++   WN +I GY  +G    A+ +  +M   G+  D  T+  +L  C+    I  G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             IH Y++K G E +LFV   LI+MYAK G +  A RVFD+++ RD V WNS++AAY Q+
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
             P  +      M   G++P   TLV++ S  A +      R +HGF  R G F  +  +
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHG-FQSNDKV 286

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
             A++DMYAK G +  A A+FE L  K V+SWN +ITGYA +GLA  A+++F  M +  E
Sbjct: 287 KTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRK--E 344

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDA 502
             P+  T+V +L A S    L +G  ++  ++++  +   V   TC++D+ G CG++D+A
Sbjct: 345 DRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEA 404

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
             L   +  +  S  W A+++   IHG  + A     ++++  + PD
Sbjct: 405 YDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIE--LEPD 449



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 224/446 (50%), Gaps = 22/446 (4%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L QSC     L+  K+LHA     G       +TKLV+ YA    L  +R+ FD I 
Sbjct: 50  YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            +N++ WN +I  Y   G    A+   Y   L  GLRPD +T P VLKAC  L    +G+
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAI-ILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGR 168

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH  V+K G+E D+FV A+L+ MY + G    A ++FD + VRD+  WN+M++ Y Q+G
Sbjct: 169 SIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNG 228

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +  E++ +  EM   GV     T+ +++   A    +  G  IH +  +HG + N  V  
Sbjct: 229 HPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT 288

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+MYAK G ++ AL +F+++ E+ VVSWN+II  Y      + A   F  M++   +P
Sbjct: 289 ALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RP 347

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T V + +  ++       R+++  ++R       V     ++D+    G ++ A  +
Sbjct: 348 DHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDL 407

Query: 404 FEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPAYSH 460
              + VK D   W  L+     +G     +E+ ++ +E+  E+ P + G YV +   Y+ 
Sbjct: 408 IRNMSVKPDSGVWGALLNSCKIHG----NVELAELALEKLIELEPDDSGNYVILANMYAQ 463

Query: 461 VG------ALRQGIKIHARVIKNCLC 480
            G       LRQ + I  R+ KN  C
Sbjct: 464 SGKWEGVEKLRQ-VMIDKRIKKNIAC 488



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 6/191 (3%)

Query: 446 PNQGT----YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           P Q T    Y S+L +     AL  G ++HA+     + ++  +AT LV +Y     + +
Sbjct: 41  PPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLN 100

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A +LF ++P+ +   WN +I  +  +G  D A+  + +MLD G+RPD+ T   +L ACS 
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
              + EG R  H    + G +  L     ++D++ + G +  A      + VR DA +W 
Sbjct: 161 LSAIGEG-RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWN 218

Query: 622 ALLGACRIHGN 632
           ++L A   +G+
Sbjct: 219 SMLAAYAQNGH 229


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 351/599 (58%), Gaps = 6/599 (1%)

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           S   +  LD+L    L   +  P    SI+  CA+  N+     IH ++ +  L  + F+
Sbjct: 41  SSTGLRELDLLHAGEL---APTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFL 97

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N+LI+MY K G +  A  VFD+M  RDVVSW  +IA Y Q+  P  A G    M +A  
Sbjct: 98  LNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARF 157

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P+  T  SL         C     +H   ++  W  EDV +G+A++DMYA+   ++ A 
Sbjct: 158 RPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNW-DEDVYVGSALLDMYARCEQMDMAI 216

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+ L  K+ +SWN LI G+A+       +  F  M+  N       TY S+  A++ +
Sbjct: 217 MVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQR-NGFGATHFTYSSMFSAFARI 275

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL QG  +HA +IK+      FV   ++ MY K G + DA  +F ++ +   V WN ++
Sbjct: 276 GALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTML 335

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           +    +G G +A+  F ++   G++ + ITF+S+LTACSH GLV EG+ YF MM++ + +
Sbjct: 336 TALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNV 394

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P + HY   VDL GRAG L  A  F+  MP+ P A++WGALLGACR+H N ++G  A+D
Sbjct: 395 QPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAAD 454

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            +FE+D ++ G  VL+ NIYA+ GKW     VR + +  G+KK P  S +++ N V +F 
Sbjct: 455 HVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFV 514

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
             + THPK   IY     +  ++K  GYVP+ + VL  + E E+E  L  HSE++A+AF 
Sbjct: 515 ADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFA 574

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I+ P  + I+I KN+R+CGDCH+  K++S++ +REI+VRD+NRFHHF +G CSCGDYW
Sbjct: 575 LINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 202/390 (51%), Gaps = 6/390 (1%)

Query: 142 LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           L P    +  ++ AC   +NL   + IH  + +     D F+  SL+HMYC+ G  + AR
Sbjct: 56  LAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDAR 115

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
            +FD MP RD  SW  +I+GY Q+    EA+ +L +M       +  T  S+L       
Sbjct: 116 HVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACG 175

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
               G  +H   VK+  + +++V + L++MYA+   M  A+ VFD+++ ++ VSWN++IA
Sbjct: 176 GCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIA 235

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            + +  D  T    F  MQ+ G      T  S+ S  A++      R VH  +++ G  +
Sbjct: 236 GFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKL 295

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
               +GN ++ MYAK G +  A  VF+ +  +D+++WNT++T  AQ GL  EA+  F+ +
Sbjct: 296 T-AFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEI 354

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
            +C  I  NQ T++S+L A SH G +++G      +    +  ++      VD+ G+ G 
Sbjct: 355 RKCG-IQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGL 413

Query: 499 IDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           + +A+   +++P   ++  W A++    +H
Sbjct: 414 LKEALIFVFKMPMEPTAAVWGALLGACRMH 443



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 205/420 (48%), Gaps = 27/420 (6%)

Query: 24  RPLFSAAANSLQIS-PDCLENES--REID-------------FDDLFQSCTKLHHV---K 64
           +P  SAA  ++ IS P    + +  RE+D             +  +  +C +  ++   +
Sbjct: 21  KPYTSAAHRAVPISFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGAR 80

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
            +HA L  S      F    L++ Y   G +S +RH FD +  R+V +W  +I+ Y +  
Sbjct: 81  AIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNY 140

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGKKIHCSVLKLGFEWDVFVA 181
             +EA+       L +  RP+ +TF  +LK   AC     G+++H   +K  ++ DV+V 
Sbjct: 141 MPAEAIGLLPDM-LRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVG 199

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
           ++LL MY R    ++A  +FD +  ++  SWNA+I+G+ +  +    L    EM+  G  
Sbjct: 200 SALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFG 259

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
               T +S+    AR   +  G  +H +++K G +   FV N ++ MYAK G M  A +V
Sbjct: 260 ATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKV 319

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD+M +RD+V+WN+++ A  Q      A   F  +++ GIQ + +T +S+ +  +     
Sbjct: 320 FDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 379

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGN-AVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
           +  +  H F M + + ++  I    + VD+  + G++  A      +P++   + W  L+
Sbjct: 380 KEGK--HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 437



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     L   + +HA L+ SG+  T F    ++  YA  G +  +R  FD +  R++ TW
Sbjct: 272 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 331

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK 171
           N+M++   + G   EAV  F +     G++ +  TF  VL AC +  LV   K +  ++K
Sbjct: 332 NTMLTALAQYGLGKEAVAHFEEIR-KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMK 390

Query: 172 ---LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
              +  E D +V  S + +  R GL   A      MP+  + + W A++ G C+
Sbjct: 391 DYNVQPEIDHYV--SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL-GACR 441


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/596 (39%), Positives = 350/596 (58%), Gaps = 37/596 (6%)

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +S  I   L IH  + +HGL+ +  ++  L   YA  G + +++ +F +     V  W +
Sbjct: 39  KSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTA 98

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           II  +        A  F+  M   G++P+  T  S    + +L      +++H   ++ G
Sbjct: 99  IIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSS----ILKLCPIEPGKALHSQAVKLG 154

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS--------------------- 414
            F  D+ +   ++D+YA+ G + SA  +F+ +P K ++S                     
Sbjct: 155 -FDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLF 213

Query: 415 ----------WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
                     WN +I GY QNG+ +EA+ +F+ M +  +  PN+ T +S+L A   +GAL
Sbjct: 214 DGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA-KAKPNEVTVLSVLSACGQLGAL 272

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             G  +H+ +  N + F+V V T LVDMY KCG ++DA  +F ++     V WN++I  +
Sbjct: 273 ESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGY 332

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
            +HG   +AL  F+ M   G+ P +ITF+ +L+AC HSG V+EG   F+ M++E+GI+P 
Sbjct: 333 AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 392

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           ++HYGCMV+L GRAGH+  A+  ++NM + PD  +WG LLGACR+HG + LG    + L 
Sbjct: 393 IEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLV 452

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           + +  N G Y+L+SNIYA VG W+GV  +R++ +D G+KK PG SSIEVNNKV  F  G 
Sbjct: 453 DQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGG 512

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
             HPK ++IY  L  +   +KS GY P    VL D+ E EKE  L  HSE+LAIAFG+I+
Sbjct: 513 LNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLIN 572

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + P + I+I KNLRVC DCH  TK IS+IT R+I+VRD NRFHHF +G CSCGDYW
Sbjct: 573 TQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 207/458 (45%), Gaps = 68/458 (14%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L      + H+ ++HA+L   G       + KL   YA+LG L +S   F      +V+ 
Sbjct: 36  LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFF 95

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL 172
           W ++I  +   G   +A++ FY   LT G+ P+ +TF  +LK C  +  GK +H   +KL
Sbjct: 96  WTAIIHGHALRGLHEQALN-FYAQMLTQGVEPNAFTFSSILKLCP-IEPGKALHSQAVKL 153

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-------------------------- 206
           GF+ D++V   LL +Y R G    A++LFD MP                           
Sbjct: 154 GFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLF 213

Query: 207 -----RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
                RD   WN MI GY Q+G   EAL +   M       + +TV S+L  C +   + 
Sbjct: 214 DGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALE 273

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           SG  +H YI  +G++FN+ V   L++MY+K G +  A  VFD++ ++DVV+WNS+I  Y 
Sbjct: 274 SGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYA 333

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
                  A   F +M + G+ P  +T + +      L+ C +S          GW  E  
Sbjct: 334 MHGFSQEALQLFKSMCRMGLHPTNITFIGI------LSACGHS----------GWVTEGW 377

Query: 382 IIGNAVVDMY----------------AKLGIINSACAVFEGLPVK-DVISWNTLITGYAQ 424
            I N + D Y                 + G +  A  + + + ++ D + W TL+     
Sbjct: 378 DIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 437

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +G  +   ++ +++ + N    N GTY+ +   Y+ VG
Sbjct: 438 HGKIALGEKIVELLVDQNL--ANSGTYILLSNIYAAVG 473



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 41/400 (10%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  + + G +    +   L   Y   G  + +  LF          W A+I G+   G
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL+   +M  +GV  +  T +SIL +C     I  G  +H   VK G + +L+V  
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRT 163

Query: 284 NLINM-------------------------------YAKFGMMRHALRVFDQMMERDVVS 312
            L+++                               YAK G +  A  +FD M ERD V 
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN +I  Y Q+  P  A   F  M +A  +P+ +T++S+ S   QL    + R VH +I 
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
             G    +V +G A+VDMY+K G +  A  VF+ +  KDV++WN++I GYA +G + EA+
Sbjct: 284 NNG-IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLV 490
           ++F+ M     ++P   T++ IL A  H G + +G  I  + +K+    +  +    C+V
Sbjct: 343 QLFKSMCRMG-LHPTNITFIGILSACGHSGWVTEGWDIFNK-MKDEYGIEPKIEHYGCMV 400

Query: 491 DMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
           ++ G+ G ++ A  L   +      V W  ++    +HG+
Sbjct: 401 NLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 440



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 37/268 (13%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E+    +  +C +L  ++    +H+ +  +G    V   T LV+ Y+  G L  +R  FD
Sbjct: 256 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 315

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            I  ++V  WNSMI  Y   G   EA+  F       GL P   TF  +L AC       
Sbjct: 316 KIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMC-RMGLHPTNITFIGILSACG------ 368

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS-GSWNAMISGYCQS 222
             H   +  G  WD+F                   K+ D+  +      +  M++   ++
Sbjct: 369 --HSGWVTEG--WDIF------------------NKMKDEYGIEPKIEHYGCMVNLLGRA 406

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G+  +A +++  M +E    DP+   ++L  C     I  G  I   +V   L  N    
Sbjct: 407 GHVEQAYELVKNMNIEP---DPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA-NSGTY 462

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDV 310
             L N+YA  G      R+   M +  V
Sbjct: 463 ILLSNIYAAVGNWDGVARLRTMMKDSGV 490


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/686 (35%), Positives = 402/686 (58%), Gaps = 11/686 (1%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + +SC  L  V   + +H     +G    V+  + L+  Y++ G L  +R  FD + +R+
Sbjct: 147 VVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRD 206

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
              WN M+  Y++ G +  AV  F    + SG  P+F T    L  C    +L+ G ++H
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRV-SGCEPNFATLACFLSVCAAEADLLSGVQLH 265

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K G E +V VA +LL MY +    + A +LF+ +P  D  +WN MISG  Q+G   
Sbjct: 266 SLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLD 325

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  +M   G   D +T+ S+LP     + +  G  +H YI+++ +  + F+ + L+
Sbjct: 326 EALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALV 385

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           ++Y K   +R A  ++D     DVV  +++I+ Y  +     A   F  + +  I+P+ +
Sbjct: 386 DIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAV 445

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+    A ++     + +HG+++R   +     + +A++DMYAK G ++ +  +F  
Sbjct: 446 TVASVLPACASISALPLGQEIHGYVLRNA-YEGKCYVESALMDMYAKCGRLDLSHYIFSK 504

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALR 465
           + +KD ++WN++I+ ++QNG   EA+++F+ M  C E I  N  T  S L A + + A+ 
Sbjct: 505 MSLKDEVTWNSMISSFSQNGEPQEALDLFRQM--CMEGIKYNNVTISSALSACASLPAIY 562

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G +IH  +IK  +  D+F  + L+DMY KCG ++ A+ +F  +P  + V WN+IIS +G
Sbjct: 563 YGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG 622

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG   ++++F  +M +EG +PDH+TF++L++AC+H+GLV EG + F  M +E+ I P +
Sbjct: 623 AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRM 682

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +H+ CMVDL+ R+G L  A  FI +MP +PDA IWGALL ACR+H N+EL  +AS  LF+
Sbjct: 683 EHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +D  N GYYVLMSNI A  G+W+GV +VR L +D  + K PG+S ++VNN   +F   ++
Sbjct: 743 LDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDK 802

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVP 731
           +HP+ E IY  L+ L  +++  GYVP
Sbjct: 803 SHPESEDIYTSLKALLQELREEGYVP 828



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 317/594 (53%), Gaps = 21/594 (3%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKT---VFSSTKLVNFYA---NLGDLSFSRHTFD 103
           L + C    H+    ++HA  VVSG +     +   T+L+  Y       D         
Sbjct: 38  LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFY--QFTLTSGLRPDFYTFPPVLKACRNLVD 161
             +  +   WN +I  +   G  S AV  FY   +T  +   PD +T P V+K+C  L  
Sbjct: 98  RAAAGSSLPWNWLIRGFTAAGHHSLAV-LFYVKMWTHPAAPSPDAHTLPYVVKSCAALGA 156

Query: 162 ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              G+ +H +    G   DV+V ++L+ MY   GL   AR  FD MP RD   WN M+ G
Sbjct: 157 VSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDG 216

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y ++G+   A+ +   MR+ G   +  T+A  L VCA   ++LSG+ +H   VK GLE  
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQE 276

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           + V+N L++MYAK   +  A R+F+ +   D+V+WN +I+   Q+     A G F  M +
Sbjct: 277 VAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLR 336

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +G +PD +TLVSL   +  LN  +  + VHG+I+R    M D  + +A+VD+Y K   + 
Sbjct: 337 SGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHM-DAFLVSALVDIYFKCRDVR 395

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPA 457
           +A  +++     DV+  +T+I+GY  NG++ +A+++F+ ++E+C  I PN  T  S+LPA
Sbjct: 396 TARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQC--IKPNAVTVASVLPA 453

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + + AL  G +IH  V++N      +V + L+DMY KCGR+D +  +F ++     V W
Sbjct: 454 CASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTW 513

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           N++IS    +G+  +AL+ FRQM  EG++ +++T  S L+AC+    +  G+   H +  
Sbjct: 514 NSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKE-IHGVII 572

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +  IK  +     ++D++ + G++ +A    + MP + + S W +++ A   HG
Sbjct: 573 KGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISAYGAHG 625



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 20/190 (10%)

Query: 464 LRQGIKIHAR-VIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRS---SSVPW 517
           L  G++IHAR V+   L     +A  T L+ MY    R  DA+++F  +PR+   SS+PW
Sbjct: 48  LPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPW 107

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDE--GVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
           N +I      G    A+ F+ +M        PD  T   ++ +C+  G VS G R  H  
Sbjct: 108 NWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLG-RLVHRT 166

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL----------G 625
               G+   +     ++ ++  AG L  A +    MP R D  +W  ++          G
Sbjct: 167 ARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR-DCVLWNVMMDGYIKAGDVGG 225

Query: 626 ACRIHGNMEL 635
           A R+  NM +
Sbjct: 226 AVRLFRNMRV 235


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/574 (40%), Positives = 353/574 (61%), Gaps = 7/574 (1%)

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV-KHGLEFNLFV 281
           G  + ALD++    L     D    + +L  C R   +  G ++H ++V  H L+ +L +
Sbjct: 69  GTGLYALDLIQRGSL---VPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N ++NMYAK G +  A R+FD+M  +D+V+W ++IA + Q+N P  A   F  M + G+
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGL 185

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           QP+  TL SL       +       +H F ++ G +   V +G+A+VDMYA+ G +++A 
Sbjct: 186 QPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG-YQSSVYVGSALVDMYARCGHMDAAQ 244

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F+G+P K  +SWN LI+G+A+ G    A+ +   M+  N   P   TY S+  A + +
Sbjct: 245 LAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN-FQPTHFTYSSVFSACASI 303

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL QG  +HA +IK+ L    F+   L+DMY K G IDDA  +F ++ +   V WN ++
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           +    HG G + L+ F QML  G+ P+ I+F+ +LTACSHSGL+ EG  YF +M++ + +
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKV 422

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P + HY   VDL GR G L  A  FI+ MP+ P A++WGALLGACR+H NMELG  A++
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAE 482

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           R FE+D  + G  +L+SNIYA+ G+W  V +VR + ++ G+KK P  S +E+ N V +F 
Sbjct: 483 RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFV 542

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
             + THP+ ++I  +   ++ K+K +GYVPD S VL  V++ E+E  L  HSE+LA+AF 
Sbjct: 543 ANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFA 602

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           ++++P  SPI+I KN+RVCGDCH   KF+S+I E
Sbjct: 603 LLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKIYE 636



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 199/383 (51%), Gaps = 20/383 (5%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHI 105
           +  L + CT+L  V++   +HA LV S  +   +     +VN YA  G L  +R  FD +
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             +++ TW ++I+ + +  R  +A+  F Q  L  GL+P+ +T   +LKA      L  G
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQM-LRLGLQPNHFTLSSLLKASGSEHGLDPG 208

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            ++H   LK G++  V+V ++L+ MY R G  + A+  FD MP +   SWNA+ISG+ + 
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G    AL +L +M+ +       T +S+   CA    +  G  +H +++K GL+   F+ 
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIG 328

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++MYAK G +  A RVFD++++ DVVSWN+++    Q          F  M + GI+
Sbjct: 329 NTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIE 388

Query: 343 PDLLTLVSLTSIVAQLNDCRNS----RSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGII 397
           P+ ++ + +      L  C +S      ++ F + + + +E DV      VD+  ++G++
Sbjct: 389 PNEISFLCV------LTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442

Query: 398 NSACAVFEGLPVKDVIS-WNTLI 419
           + A      +P++   + W  L+
Sbjct: 443 DRAERFIREMPIEPTAAVWGALL 465



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 9/185 (4%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  +F +C     L   K +HA ++ SG     F    L++ YA  G +  ++  FD + 
Sbjct: 293 YSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV 352

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKK 164
             +V +WN+M++   + G   E +D F Q  L  G+ P+  +F  VL AC +  L+D   
Sbjct: 353 KPDVVSWNTMLTGCAQHGLGKETLDRFEQM-LRIGIEPNEISFLCVLTACSHSGLLDEGL 411

Query: 165 IHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQS 222
            +  ++K    E DV    + + +  R GL + A +   +MP+  + + W A++ G C+ 
Sbjct: 412 YYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL-GACRM 470

Query: 223 GNAVE 227
              +E
Sbjct: 471 HKNME 475


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/601 (38%), Positives = 362/601 (60%), Gaps = 7/601 (1%)

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           C   +   A+  +D ++  G+  D  T + ++  C  +  +  G LI  ++  +G    +
Sbjct: 37  CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           F+ N LINMY KF ++  A ++FDQM +R+V+SW ++I+AY +      A      M + 
Sbjct: 97  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            ++P++ T    +S++   N   + R +H  I++ G    DV + +A++D++AKLG    
Sbjct: 157 NVRPNVYTY---SSVLRSCNGMSDVRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPED 212

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A +VF+ +   D I WN++I G+AQN  +  A+E+F+ M+    I   Q T  S+L A +
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACT 271

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +  L  G++ H  ++K     D+ +   LVDMY KCG ++DA+ +F Q+     + W+ 
Sbjct: 272 GLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +IS    +G   +AL  F +M   G +P++IT V +L ACSH+GL+ +G  YF  M++ +
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P  +HYGCM+DL G+AG L  A   +  M   PDA  W  LLGACR+  NM L   A
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           + ++  +D E+ G Y L+SNIYAN  KW+ V+E+R+  RDRG+KK PG S IEVN ++  
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+ +HP+  ++  +L  L  ++  +GYVP+ +FVLQD+E ++ E  L  HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG+++ P +  I+I KNLR+CGDCH + K  S++  R I++RD  R+HHF+DG CSCGDY
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629

Query: 820 W 820
           W
Sbjct: 630 W 630



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 189/362 (52%), Gaps = 26/362 (7%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           L  +G    +F    L+N Y     L+ +   FD +  RNV +W +MIS Y +C    +A
Sbjct: 87  LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
           ++      L   +RP+ YT+  VL++C  + D + +HC ++K G E DVFV ++L+ ++ 
Sbjct: 147 LELLV-LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G    A  +FD+M   D+  WN++I G+ Q+  +  AL++   M+  G   +  T+ S
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  C     +  G+  H++IVK+  + +L ++N L++MY K G +  ALRVF+QM ERD
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V++W+++I+   Q+     A   F  M+ +G +P+ +T      IV  L  C      H 
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT------IVGVLFACS-----HA 372

Query: 370 FIMRRGWF----MEDVIIGNAV-------VDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
            ++  GW+    M+ +   + V       +D+  K G ++ A  +   +  + D ++W T
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432

Query: 418 LI 419
           L+
Sbjct: 433 LL 434


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/577 (39%), Positives = 346/577 (59%), Gaps = 5/577 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V+S++       +I    L+H  +VK     + F+ + L+  Y + G    A ++FD+M 
Sbjct: 34  VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           ERD+VSWNS+I+ Y             + M   + G +P+ +T +S+ S           
Sbjct: 94  ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           R +HG +M+ G  +E+V + NA ++ Y K G + S+C +FE L +K+++SWNT+I  + Q
Sbjct: 154 RCIHGLVMKFG-VLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           NGLA + +  F M        P+Q T++++L +   +G +R    IH  ++      +  
Sbjct: 213 NGLAEKGLAYFNMSRRVGH-EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           + T L+D+Y K GR++D+ ++F+++    S+ W A+++ +  HG G  A+  F  M+  G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           + PDH+TF  LL ACSHSGLV EG+ YF  M + + I P L HY CMVDL GR+G L  A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
           +  I+ MP+ P + +WGALLGACR++ + +LG  A++RLFE++  +   YV++SNIY+  
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G W+    +R+L + +GL +  G S IE  NK+  F  G+ +HP+ EKI  +L+ +  KM
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511

Query: 725 KS-LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           KS +GY     FVL DV ED KE ++  HSE++A+AFG++   P  PI I KNLR+CGDC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H   K IS I +R II+RDS RFHHF DG CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 218/449 (48%), Gaps = 9/449 (2%)

Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           Q +    L  +  +    +K+C ++   + +HC V+K       F+   L+  Y R G  
Sbjct: 23  QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILP 252
             A KLFD+MP RD  SWN++ISGY   G   +  ++L  M +  V   P  +T  S++ 
Sbjct: 83  VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C    +   G  IH  ++K G+   + V N  IN Y K G +  + ++F+ +  +++VS
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++I  + Q+        +F   ++ G +PD  T +++      +   R ++ +HG IM
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
             G F  +  I  A++D+Y+KLG +  +  VF  +   D ++W  ++  YA +G   +AI
Sbjct: 263 -FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV--ATCLV 490
           + F++M     I+P+  T+  +L A SH G + +G K +   +      D  +   +C+V
Sbjct: 322 KHFELMVHYG-ISPDHVTFTHLLNACSHSGLVEEG-KHYFETMSKRYRIDPRLDHYSCMV 379

Query: 491 DMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           D+ G+ G + DA  L  ++P   SS  W A++    ++           ++ +   R D 
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR-DG 438

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
             +V L    S SGL  +  R  ++M+++
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQK 467



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 192/431 (44%), Gaps = 27/431 (6%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           +SC  +   + LH  +V S   +  F   +LV  Y  LG    +   FD +  R++ +WN
Sbjct: 42  KSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWN 101

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           S+IS Y   G L +  +   +  ++  G RP+  TF  ++ AC    +  +G+ IH  V+
Sbjct: 102 SLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVM 161

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G   +V V  + ++ Y + G    + KLF+D+ +++  SWN MI  + Q+G A + L 
Sbjct: 162 KFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLA 221

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
             +  R  G   D  T  ++L  C     +     IH  I+  G   N  ++  L+++Y+
Sbjct: 222 YFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYS 281

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  +  VF ++   D ++W +++AAY        A   F  M   GI PD +T   
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTH 341

Query: 351 LTSIVAQLNDCRNSRSV----HGFIMRRGWFMEDVIIG--NAVVDMYAKLGIINSACAVF 404
           L      LN C +S  V    H F      +  D  +   + +VD+  + G++  A  + 
Sbjct: 342 L------LNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395

Query: 405 EGLPVKDVIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQG-TYVSILPAYS 459
           + +P++     W  L+     Y    L ++A       E   E+ P  G  YV +   YS
Sbjct: 396 KEMPMEPSSGVWGALLGACRVYKDTQLGTKA------AERLFELEPRDGRNYVMLSNIYS 449

Query: 460 HVGALRQGIKI 470
             G  +   +I
Sbjct: 450 ASGLWKDASRI 460


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/573 (42%), Positives = 343/573 (59%), Gaps = 3/573 (0%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           SIL  C  S ++ +G  +H  ++  GL  +  +S  L+++YA  G + HA R+FD M +R
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           +V  WN +I AY +      A   +  M + G++PD  T   +    A L D    R VH
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             +    W  +DV +   VVDMYAK G ++ A AVF+G+ V+D + WN++I  Y QNG  
Sbjct: 187 QRVSGTRWG-QDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            EA+ + + M   N I P   T VS + A +   AL +G ++H    +        + T 
Sbjct: 246 MEALALCRDMA-ANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTS 304

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML-DEGVRP 547
           LVDMY K G +  A  LF Q+ +   V WNA+I  +G+HG  D+AL  F +M  D  V P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTP 364

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           D+ITFV +L+AC+H G+V E + +F++M   + IKP ++HY C++D+ G  G    A++ 
Sbjct: 365 DNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDL 424

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I+ M + PD+ IWGALL  C+IH N+ELG +A  +L E++ E+ G YV +SNIYA  GKW
Sbjct: 425 IKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKW 484

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           E    VR L  +RGLKK    S IE+  K   F  G+ +HP+ ++IY EL  L   M   
Sbjct: 485 EKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDA 544

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GYVPD   V  +V++DEK +++ SHSERLAIAFG+IS+PP + + + KNLRVC DCH   
Sbjct: 545 GYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVI 604

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K ISQI +REII+RD NR+HHF +G CSC DYW
Sbjct: 605 KLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 228/479 (47%), Gaps = 17/479 (3%)

Query: 27  FSAAANSLQISPDCLENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSST 83
           F+A+      +P    +         + QSC     L   ++LH  L+VSG       ST
Sbjct: 42  FAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLST 101

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KLV+ YA  G +  +R  FD +  RNV+ WN +I  Y R G    AV   Y+  +  G+ 
Sbjct: 102 KLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVR-LYRGMVEHGVE 160

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD +T+P VLKAC  L+D   G+++H  V    +  DVFV A ++ MY + G  + AR +
Sbjct: 161 PDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAV 220

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FD + VRD+  WN+MI+ Y Q+G  +EAL +  +M   G+     T+ S +   A +  +
Sbjct: 221 FDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAAL 280

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H +  + G      +  +L++MYAK G ++ A  +F+Q+M+R++VSWN++I  Y
Sbjct: 281 PRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY 340

Query: 321 EQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
                   A   F  M+  A + PD +T V + S          ++     ++       
Sbjct: 341 GMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKP 400

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM- 437
            V     V+D+    G    A  + +G+ ++ D   W  L+ G   +    + +E+ ++ 
Sbjct: 401 TVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIH----KNVELGELA 456

Query: 438 MEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           +++  E+ P + G YV +   Y+  G   +  ++   +    L     +A   +++ GK
Sbjct: 457 LQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGL--KKILACSWIELKGK 513



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           + SIL +    G+LR G ++H R++ + L  D  ++T LVD+Y  CG++  A  LF  +P
Sbjct: 65  HTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMP 124

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
           + +   WN +I  +   G  + A+  +R M++ GV PD+ T+  +L AC+ + L  E  R
Sbjct: 125 KRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACA-ALLDLETGR 183

Query: 571 YFHMMQEEFGIKPHLKHYGC--MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
             H  Q   G +     + C  +VD++ + G +  A      + VR DA +W +++ A  
Sbjct: 184 EVH--QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVR-DAVVWNSMIAAYG 240

Query: 629 IHGN-MELGAVASD 641
            +G  ME  A+  D
Sbjct: 241 QNGRPMEALALCRD 254


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/635 (37%), Positives = 366/635 (57%), Gaps = 42/635 (6%)

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           CQ     EAL IL ++     S+     ++++  C +S  +  G  +H +I   G    L
Sbjct: 50  CQQNRLKEALQILHQIDKPSASV----YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGL 105

Query: 280 FVSNNLINMYAK-------------------------------FGMMRHALRVFDQMMER 308
           F+ N L+ MYAK                                G+++ A  +FD+M ER
Sbjct: 106 FILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPER 165

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           D  SW ++I+ Y + + P  A   F  M+++   + +  T+ S  +  A +   R  + +
Sbjct: 166 DNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEI 225

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HG+IMR G    D ++ +A+ DMY K G I  A  +F+ +  +D+++W  +I  Y Q+G 
Sbjct: 226 HGYIMRTG-LDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGR 284

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD--VFV 485
             E  ++F  +     I PN+ T+  +L A ++  +   G K+H  + +  + FD   F 
Sbjct: 285 RKEGFDLFADLLRSG-IRPNEFTFSGVLNACANQTSEELGKKVHGYMTR--VGFDPFSFA 341

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
           A+ LV MY KCG +  A  +F + P+     W ++I+ +  +GQ D+A+ +F  ++  G 
Sbjct: 342 ASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGT 401

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +PDHITFV +L+AC+H+GLV +G  YFH ++E++G+     HY C++DL  R+G    A 
Sbjct: 402 QPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAE 461

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
           N I  M ++PD  +W +LLG CRIHGN++L   A++ LFE++ EN   YV ++NIYA  G
Sbjct: 462 NIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAG 521

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
            W  V ++R    DRG+ K PG S I +   V +F  G+ +HPK ++I + L  L+ +MK
Sbjct: 522 MWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMK 581

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             G+VPD +FVL DVE+++KE  L+ HSE+LA+AFGIIS+P  +PI++FKNLR C DCH 
Sbjct: 582 EEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHT 641

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             KFIS+IT R+IIVRDSNRFH F+DG CSC DYW
Sbjct: 642 AIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 223/497 (44%), Gaps = 51/497 (10%)

Query: 8   CKDRRLCKLLPLL-QAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLH-HVKR 65
           C+  RL + L +L Q  +P  S  +  +Q    C+++         L Q   K+H H+K 
Sbjct: 50  CQQNRLKEALQILHQIDKPSASVYSTLIQ---SCIKSR--------LLQQGKKVHQHIKL 98

Query: 66  ---------LHALLVVSGKIKTVFSSTKL---------------VNFYANLGDLSFSRHT 101
                    L+ LL +  K  ++  S KL               ++ YA +G L  ++  
Sbjct: 99  SGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSL 158

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
           FD +  R+ ++W +MIS YVR  R +EA++ F     +   + + +T    L A      
Sbjct: 159 FDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPC 218

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
           L  GK+IH  +++ G + D  V ++L  MY + G    AR +FD M  RD  +W AMI  
Sbjct: 219 LRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDR 278

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y Q G   E  D+  ++   G+  +  T + +L  CA   +   G  +H Y+ + G +  
Sbjct: 279 YFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPF 338

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            F ++ L++MY+K G M  A RVF +  + D+ SW S+IA Y Q+  P  A  +F  + +
Sbjct: 339 SFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVK 398

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +G QPD +T V + S  A              I  +            ++D+ A+ G  +
Sbjct: 399 SGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFD 458

Query: 399 SACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIEVFQMMEECNEINP-NQGTYVS 453
            A  +   + +K D   W +L+ G   +G   LA  A E         EI P N  TYV+
Sbjct: 459 EAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEAL------FEIEPENPATYVT 512

Query: 454 ILPAYSHVGALRQGIKI 470
           +   Y+  G   +  KI
Sbjct: 513 LANIYATAGMWSEVAKI 529


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/688 (36%), Positives = 388/688 (56%), Gaps = 19/688 (2%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           + P+L  C    +L   + +H  ++K G   D+FVA SL++ Y R G +  AR LFD MP
Sbjct: 81  YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            ++  +W A+I+GY  +   +EAL++  EM   G      T+ ++L  C+ S+N   G  
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA-YEQSN 324
           +H Y +K+       + N+L  MYAK G +  A+R F  + +++V++W ++I+A  E  N
Sbjct: 201 VHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDEN 260

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                   F  M   G+ P+  TL S+ S+     D    + V  F  + G    ++ + 
Sbjct: 261 YTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGC-QTNIPVK 319

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-----------NGLASEAIE 433
           N+ + +Y + G  + A   FE +    +I+WN +I+GYAQ                +A++
Sbjct: 320 NSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALK 379

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           VF+ ++  + + P+  T+ SIL   S + AL QG +IHA+ IK     DV V + LV+MY
Sbjct: 380 VFRNLKR-SAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMY 438

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I+DA   F ++   + V W ++IS +  HG+  +A+  F  M   GVRP+ ITFV
Sbjct: 439 NKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFV 498

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L+ACS++GL  + + YF MM+EE+ I+P + HYGCMVD+F R G L  A  FI+    
Sbjct: 499 CVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGF 558

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P+ +IW +L+  CR HGNMEL   A+DRL E+  + +  YVL+ N+Y +  +W  V  V
Sbjct: 559 EPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARV 618

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R L +  GL      S I + +KV  F   ++TH   +++Y  L NL  K K++GY P +
Sbjct: 619 RKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQ 678

Query: 734 SFVLQDVEEDEKEHI--LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           S  L D E+D+K     +  HSERLA+A G++ +PP + +++ KN+ +C DCH+  KF S
Sbjct: 679 SAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFS 738

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDY 819
            +  REI+VRDS R H FKDG CSCGD+
Sbjct: 739 LLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 262/516 (50%), Gaps = 25/516 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   + LH  +V +G    +F +T LVN Y   G    +R  FD +  +NV TW ++I+ 
Sbjct: 94  LGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITG 153

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           Y    +L EA++ F +  L +G  P  YT   +L AC    N   G ++H   +K     
Sbjct: 154 YTVNSQLLEALEVFVEM-LEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALS 212

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEM 235
              +  SL  MY + G    A + F  +P ++  +W  MIS   +  N  E  L +  +M
Sbjct: 213 ITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDM 272

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            ++GV  +  T+ S++ +C    ++  G  +  +  K G + N+ V N+ + +Y + G  
Sbjct: 273 LMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGET 332

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQ----SNDPITA--HGF-----FTTMQQAGIQPD 344
             A+R F++M +  +++WN++I+ Y Q    + D + A   GF     F  ++++ ++PD
Sbjct: 333 DEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPD 392

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T  S+ S+ + +        +H   ++ G F+ DV++ +A+V+MY K G I  A   F
Sbjct: 393 LFTFSSILSVCSSMMALEQGEQIHAQTIKTG-FLSDVVVNSALVNMYNKCGCIEDATKAF 451

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             + ++ +++W ++I+GY+Q+G   EAI++F+ M     + PN+ T+V +L A S+ G L
Sbjct: 452 VEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAG-VRPNEITFVCVLSACSYAG-L 509

Query: 465 RQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
            +  + +  ++K     +  V    C+VDM+ + GR+DDA +   +     +   W++++
Sbjct: 510 AEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLV 569

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLL 556
           +  G    G+  L F+       +RP  I T+V LL
Sbjct: 570 A--GCRSHGNMELAFYAADRLIELRPKGIETYVLLL 603



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 216/457 (47%), Gaps = 20/457 (4%)

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA----LDILDEMRL--EGVSMDPI 245
           G A+  R     +   D  +WN       Q+G+ +EA    LD+ + M +  EG ++   
Sbjct: 20  GGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSA 79

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
               +L VC  + ++     +H ++VK G   ++FV+ +L+N Y + G  + A  +FDQM
Sbjct: 80  MYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQM 139

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            E++VV+W ++I  Y  ++  + A   F  M +AG  P   TL ++ +  +  N+     
Sbjct: 140 PEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGS 199

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VHG+ ++    +    IGN++  MYAK G + SA   F  +P K+VI+W T+I+  A++
Sbjct: 200 QVHGYTIKY-RALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAED 258

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
              +E      +    + + PN+ T  S++        L  G ++ A   K     ++ V
Sbjct: 259 ENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPV 318

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG---------IHG--QGDKAL 534
               + +Y + G  D+AM  F ++   S + WNA+IS +          +H   +G +AL
Sbjct: 319 KNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQAL 378

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             FR +    ++PD  TF S+L+ CS    + +G++  H    + G    +     +V++
Sbjct: 379 KVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQ-IHAQTIKTGFLSDVVVNSALVNM 437

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           + + G +  A      M +R   + W +++     HG
Sbjct: 438 YNKCGCIEDATKAFVEMSIRTLVT-WTSMISGYSQHG 473



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   C+    L   +++HA  + +G +  V  ++ LVN Y   G +  +   F  +S
Sbjct: 396 FSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMS 455

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKK 164
            R + TW SMIS Y + GR  EA+  F      +G+RP+  TF  VL AC    L +  +
Sbjct: 456 IRTLVTWTSMISGYSQHGRPQEAIQLFEDMRF-AGVRPNEITFVCVLSACSYAGLAEKAE 514

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFG-----LANVARKLFDDMPVRDSGSWNAMIS 217
            +  ++K  ++ +  V     ++ M+ R G      A + R  F+     +   W+++++
Sbjct: 515 HYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP----NEAIWSSLVA 570

Query: 218 GYCQSGN---AVEALDILDEMRLEGV 240
           G    GN   A  A D L E+R +G+
Sbjct: 571 GCRSHGNMELAFYAADRLIELRPKGI 596


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/574 (40%), Positives = 358/574 (62%), Gaps = 3/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + ++L    RS ++  GL +H +I+K GL+    VS+NLIN+Y+K  +   +L+VFD+  
Sbjct: 28  ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP 87

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ++   +W+S+I+A+ Q+  P+ A  FF  M   G++PD     S T     L      +S
Sbjct: 88  KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH   ++ G++  DV +G+++VDMYAK G I  A  +F+ +P ++V+SW+ +I GYAQ  
Sbjct: 148 VHCLAVKTGYYC-DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              EA+ +F+      +++ N  T+ S++   S    L  G  IH   +K       FV 
Sbjct: 207 DGVEALTLFKQ-ALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVG 265

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + L+ +Y KCG I+ A  +F ++P  +   WN+++     H    +    F +M + G++
Sbjct: 266 SALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK 325

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ I+F+S+L ACSH+GLV +G+ YF +M++ +GI+P  +HY  +VDL GRAG L  A +
Sbjct: 326 PNFISFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVS 384

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I+ MP+RP  S+WGALL  CRIH + E+ A  +DR+ E+DS + G +VL+SN YA  G+
Sbjct: 385 VIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGR 444

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           +E    +R + RDRG+KK  G S +E  NKV  F  G+R+H K+ +IY++L  L  +M+ 
Sbjct: 445 YEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEK 504

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GYV D SFVL+ V+ +EK   +  HSERLAIAFG+I+ PP  PI++ KNLRVCGDCH  
Sbjct: 505 AGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAA 564

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KF+S+   R +IVRD+NRFH F+DG CSCGDYW
Sbjct: 565 IKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 209/422 (49%), Gaps = 10/422 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     L    +LHA ++  G       S  L+N Y+      FS   FD    ++  TW
Sbjct: 35  FTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTW 94

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           +S+IS + +      A+  F++  L  G+RPD + +P   KAC   R    GK +HC  +
Sbjct: 95  SSVISAFAQNEAPLLALQ-FFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAV 153

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G+  DVFV +SL+ MY + G    AR LFD+MP R+  SW+ MI GY Q  + VEAL 
Sbjct: 154 KTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALT 213

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +  +  +E V ++  T +S++ VC+ S  +  G LIH   +K   + + FV + LI++Y+
Sbjct: 214 LFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYS 273

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G++  A +VFD++  R++  WNS++ A  Q        G F  M   G++P+ ++ +S
Sbjct: 274 KCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLS 333

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPV 409
           +    +        R    F + R + +E      A +VD+  + G +  A +V + +P+
Sbjct: 334 VLYACSHAGLVEKGREY--FSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPM 391

Query: 410 KDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           +   S W  L+TG   +     A  V   + E +  + + G +V +  AY+  G   +  
Sbjct: 392 RPTESVWGALLTGCRIHKDTEMAAFVADRILEMD--SSSSGLHVLLSNAYAAAGRYEEAA 449

Query: 469 KI 470
           ++
Sbjct: 450 RM 451



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 5/220 (2%)

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
            S AI+  Q     N    N     ++L +++   +LRQG+++HA ++K  L     V+ 
Sbjct: 5   TSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSH 64

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+++Y K      ++ +F + P+ SS  W+++IS    +     AL FFR+ML++GVRP
Sbjct: 65  NLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRP 124

Query: 548 DHITFVSLLTACSHSGLV--SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           D   + S   AC   G +  S+  +  H +  + G    +     +VD++ + G +G A 
Sbjct: 125 DDHIYPSATKAC---GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +    MP R   S  G + G  ++   +E   +    L E
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/565 (41%), Positives = 338/565 (59%), Gaps = 41/565 (7%)

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +S  I   L IH  + +HGL+ +  ++  L   YA  G + +++ +F +     V  W +
Sbjct: 39  KSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTA 98

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           II  +    D ++A   F TM +        +LVSLT                       
Sbjct: 99  IIHGHALRGDVVSAQQLFDTMPEK-------SLVSLT----------------------- 128

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
                     A++  YAK G +++A  +F+G+  +D + WN +I GY QNG+ +EA+ +F
Sbjct: 129 ----------AMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 178

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           + M +  +  PN+ T +S+L A   +GAL  G  +H+ +  N + F+V V T LVDMY K
Sbjct: 179 RRMLKA-KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSK 237

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG ++DA  +F ++     V WN++I  + +HG   +AL  F+ M   G+ P +ITF+ +
Sbjct: 238 CGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGI 297

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           L+AC HSG V+EG   F+ M++E+GI+P ++HYGCMV+L GRAGH+  A+  ++NM + P
Sbjct: 298 LSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEP 357

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
           D  +WG LLGACR+HG + LG    + L + +  N G Y+L+SNIYA VG W+GV  +R+
Sbjct: 358 DPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRT 417

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
           + +D G+KK PG SSIEVNNKV  F  G   HPK ++IY  L  +   +KS GY P    
Sbjct: 418 MMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDI 477

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           VL D+ E EKE  L  HSE+LAIAFG+I++ P + I+I KNLRVC DCH  TK IS+IT 
Sbjct: 478 VLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITG 537

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           R+I+VRD NRFHHF +G CSCGDYW
Sbjct: 538 RKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 180/427 (42%), Gaps = 72/427 (16%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L      + H+ ++HA+L   G       + KL   YA+LG L +S   F      +V+ 
Sbjct: 36  LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFF 95

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL 172
           W ++I  +   G +  A             +  F T P                      
Sbjct: 96  WTAIIHGHALRGDVVSA-------------QQLFDTMP---------------------- 120

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
             E  +    ++L  Y + G  + AR LFD M  RD   WN MI GY Q+G   EAL + 
Sbjct: 121 --EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 178

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             M       + +TV S+L  C +   + SG  +H YI  +G++FN+ V   L++MY+K 
Sbjct: 179 RRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 238

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A  VFD++ ++DVV+WNS+I  Y        A   F +M + G+ P  +T + + 
Sbjct: 239 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGI- 297

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY----------------AKLGI 396
                L+ C +S          GW  E   I N + D Y                 + G 
Sbjct: 298 -----LSACGHS----------GWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGH 342

Query: 397 INSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           +  A  + + + ++ D + W TL+     +G  +   ++ +++ + N    N GTY+ + 
Sbjct: 343 VEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL--ANSGTYILLS 400

Query: 456 PAYSHVG 462
             Y+ VG
Sbjct: 401 NIYAAVG 407


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/690 (36%), Positives = 378/690 (54%), Gaps = 18/690 (2%)

Query: 140 SGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           +G+     ++  + +AC   ++L DG+  H  + +       F+  S+L MYC+ G    
Sbjct: 4   AGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLAD 63

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           ARK+FD+M  R+  SWN +IS Y ++G   +   +   M       +  T    L     
Sbjct: 64  ARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLN 123

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G  IH + ++ GL  N  V+  + NMY K G +  A  VF++M E++ V+W  I
Sbjct: 124 PSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGI 183

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           +  Y Q+   + A   F  M   G++ D      +    A L +    R +HG I++ G 
Sbjct: 184 MVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLG- 242

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              +V +G  +VD Y K   + SA   FE +   + +SW+ LITGY Q G   EA++ F+
Sbjct: 243 LESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFE 302

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            +     ++ N  TY SI  A S +     G + HA  IK+ L       + ++ MY +C
Sbjct: 303 SLR-TRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRC 361

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           GR+D A  +F  +    +V W AII+ +   G   +AL  FR+M D GVRP+ +TF+++L
Sbjct: 362 GRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVL 421

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           TACSHSGLV EG++Y   M   +G+   + HY CMVD++ RAG L  A   I++MP  PD
Sbjct: 422 TACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPD 481

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A  W  LLG C  + N+E+G +A++ LF++D E+   Y+LM N+YA+ GKW+    VR +
Sbjct: 482 AMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKM 541

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
             +R L+K    S I V  KV  F  G++ HP+ E+IY +L  L   +     + +++ +
Sbjct: 542 MAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSV-----IKEETGL 596

Query: 737 LQDVEED------EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           L   EED      E++  L  HSERLA+AFG+IS+P  +P+ +FKNLR C DCH++ K +
Sbjct: 597 L--TEEDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQV 654

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S IT REI+VRDS RFHHFK G CSC DYW
Sbjct: 655 SLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 236/482 (48%), Gaps = 21/482 (4%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           LF++C K+  +   +  H  +  + K    F    ++  Y   G L+ +R  FD +  RN
Sbjct: 16  LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERN 75

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           + +WN++IS Y   G   +   C +   L    +P+  T+   L++  N   L  GK+IH
Sbjct: 76  LVSWNTIISAYAENGVFDKGF-CMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIH 134

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              ++ G   +  V  ++ +MY + G    A  +F+ M  +++ +W  ++ GY Q+   +
Sbjct: 135 SHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQM 194

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +AL +  +M  EGV +D    + +L  CA  + +  G  IH +IVK GLE  + V   L+
Sbjct: 195 DALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLV 254

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           + Y K   +  A + F+ + E + VSW+++I  Y Q  +   A   F +++   +  +  
Sbjct: 255 DFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSF 314

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T  S+    + L D  +    H   ++    +      +A++ MY++ G ++ A  VFE 
Sbjct: 315 TYTSIFQACSALADFNSGAQAHADAIKSS-LVAYQHGESAMITMYSRCGRLDYATRVFES 373

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +   D ++W  +I GYA  G A EA+++F+ M++C  + PN  T++++L A SH      
Sbjct: 374 IDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCG-VRPNAVTFIAVLTACSH-----S 427

Query: 467 GIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNA 519
           G+ I  R     +  +  VAT      C+VD+Y + G + +A+ L   +P S  ++ W  
Sbjct: 428 GLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKC 487

Query: 520 II 521
           ++
Sbjct: 488 LL 489



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 12/288 (4%)

Query: 43  NESREID---FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           NE  E+D   F  + ++C  L  +   +++H  +V  G    V   T LV+FY    +L 
Sbjct: 205 NEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLE 264

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +   F+ IS  N  +W+++I+ Y + G   EA+  F     T  +  + +T+  + +AC
Sbjct: 265 SATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLR-TRSVDINSFTYTSIFQAC 323

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L D   G + H   +K          ++++ MY R G  + A ++F+ +   D+ +W 
Sbjct: 324 SALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWT 383

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG-LLIHLYIVK 272
           A+I+GY   GNA EAL +   M+  GV  + +T  ++L  C+ S  ++ G   +      
Sbjct: 384 AIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSN 443

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           +G+   +   + ++++Y++ G ++ AL +   M    D +SW  ++  
Sbjct: 444 YGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/584 (40%), Positives = 360/584 (61%), Gaps = 9/584 (1%)

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G+  D  T   I+  C+   +   G+ IH  +VK G +  +F+SN+LI MY K      +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +VFD+M +++ VSW++II A  Q +        F  M   G +P    +++  + V   
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRSH 124

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            +  +   V+  ++  G    D  + +A   M+A+ G +  A  +F+G+  KD+++W T 
Sbjct: 125 EEADD---VYRVVVENGLDF-DQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I  Y +  +  EA+ + + M     I P+  T + ++ A S + + +    +H  +I   
Sbjct: 181 IEAYVKADMPLEALGLLKQMM-LQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTG 238

Query: 479 LCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             ++  +A  T L+D+Y KCG +  A  +F  +   + + W+A+IS +G+HG G +ALN 
Sbjct: 239 FFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNL 298

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F QM    V+PDHITFVS+L+ACSHSGLV+EG   F+ M  +FG+ P  +HY CMVD+ G
Sbjct: 299 FDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILG 357

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG L  A +FI+ MPVRP+A++WGALLGACRIH N++L  + +  LF++D  N G YV+
Sbjct: 358 RAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVI 417

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           + NIY   GK +  D +R+L ++RG+KK  G+S IE+ NK+  F  G+R+HP+ + IY E
Sbjct: 418 LYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSE 477

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L  L  +++  GY PD +FVL DV+E+ KE +L  HSE+LAI FG+++  P S I+I KN
Sbjct: 478 LERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKN 537

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           LRVCGDCH  TKFIS++T REI+VRD++RFHHFK+G CSC DYW
Sbjct: 538 LRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 222/415 (53%), Gaps = 20/415 (4%)

Query: 138 LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           L  G++PD +TFP ++KAC   R+   G +IH  V+K G++  VF++ SL+ MY +    
Sbjct: 2   LRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKY 61

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
            ++R++FD+MP +++ SW+A+I    Q     E   +  +M  EG       + + +  C
Sbjct: 62  ELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-AC 120

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
            RS        ++  +V++GL+F+  V +    M+A+ G +  A ++FD +M +D+V+W 
Sbjct: 121 VRSHEEADD--VYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWA 178

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           + I AY +++ P+ A G    M   GI PD +TL+ +    + L   + +  VHG I   
Sbjct: 179 TTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTG 238

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
            ++ + + +  A++D+Y K G +  A  VF+G+  +++I+W+ +I+GY  +G   EA+ +
Sbjct: 239 FFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNL 298

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA------TC 488
           F  M+    + P+  T+VSIL A SH G + +G +       N +  D  V        C
Sbjct: 299 FDQMKA--SVKPDHITFVSILSACSHSGLVAEGWECF-----NSMARDFGVTPRPEHYAC 351

Query: 489 LVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           +VD+ G+ G++D+A     ++P R ++  W A++    IH   D A    R + D
Sbjct: 352 MVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFD 406



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 215/457 (47%), Gaps = 33/457 (7%)

Query: 34  LQISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYA 90
           L I PD          F  + ++C+ L H +   R+H  +V  G    VF S  L+  Y 
Sbjct: 4   LGIQPD-------NFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYG 56

Query: 91  NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
                  SR  FD +  +N  +W+++I   ++  R  E    F Q  L+ G RP      
Sbjct: 57  KCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQM-LSEGSRPSRGAIL 115

Query: 151 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
             +   R+  +   ++  V++ G ++D  V ++   M+ R G   VARKLFD +  +D  
Sbjct: 116 NAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLV 175

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           +W   I  Y ++   +EAL +L +M L+G+  D IT+  ++  C+   +     ++H  I
Sbjct: 176 TWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVH-GI 234

Query: 271 VKHGLEFN--LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           +  G  +N  L V   LI++Y K G + +A +VFD M ER++++W+++I+ Y        
Sbjct: 235 ITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGRE 294

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTS------IVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           A   F  M +A ++PD +T VS+ S      +VA+  +C NS +    +  R        
Sbjct: 295 ALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYA--- 350

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
               +VD+  + G ++ AC   E +PV+ +   W  L+ G  +  L  +  E+  +    
Sbjct: 351 ---CMVDILGRAGKLDEACDFIERMPVRPNAAVWGALL-GACRIHLNVDLAEM--VARAL 404

Query: 442 NEINP-NQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
            +++P N G YV +   Y+  G  ++   I   ++KN
Sbjct: 405 FDLDPHNAGRYVILYNIYTLTGKRKEADSIRT-LMKN 440



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           ML  G++PD+ TF  ++ ACS       G R  H    +FG +  +     ++ ++G+  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIR-IHQDVVKFGYQSQVFISNSLITMYGKCD 59

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGAC 627
              ++      MP + +A  W A++GAC
Sbjct: 60  KYELSRQVFDEMPDK-NAVSWSAIIGAC 86


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/657 (38%), Positives = 378/657 (57%), Gaps = 41/657 (6%)

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           LFD +P  D  +W  +ISG+ Q G   +A+DI   +    V  D   + S+   CA S +
Sbjct: 33  LFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGD 92

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           ++    IH   ++ G   +L + N LI+M+ K   +  A  VFD M+ +DVVSW S+   
Sbjct: 93  LVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYC 152

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           Y            F  M   GI+ + LT+ S+    A     +  R VHGFI+R    ME
Sbjct: 153 YVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFILRNE--ME 208

Query: 380 -DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY---------------- 422
            +V + +A+V+MYA    +  A  VF+ +  +D++SWN ++T Y                
Sbjct: 209 GNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQM 268

Query: 423 -------------------AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
                               QNG    A+ +   M++   I PN+ T VS LP  +++ +
Sbjct: 269 RKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSG-IKPNRITIVSALPGCTNLES 327

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           LR G +IH  V ++    DV + T LV +Y KCG ++ +  +F  +PR   V WN +I  
Sbjct: 328 LRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMA 387

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           + +HG+G ++L  F +MLD GV P+ +TF+ +L+ CSHS L  EG   F+ M  E  I P
Sbjct: 388 NSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITP 447

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
              HY CMVD+  RAG L  A++FI+ MP+ P A+ WGALLGACR++ N+ELG +A+ +L
Sbjct: 448 DADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQL 507

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
           FE++ +N G YVL+SNI     KW    E+R + RD+GL KTPG S ++V NKV  F TG
Sbjct: 508 FEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTG 567

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
           ++++ + + IY  L  +  KM+  GY P+  FVLQ+V+++++E  L SHSERLA+AFGI+
Sbjct: 568 DKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGIL 627

Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S  K+ +++FKNLR+CGDCHN  K I++I   +IIVRDS RFHHF+DG C+C D+W
Sbjct: 628 NSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 240/468 (51%), Gaps = 44/468 (9%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           S KL+    N GDL  + + FD I   ++ TW  +IS + + G   +A+D  Y   L+  
Sbjct: 14  SIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAID-IYSTLLSRN 72

Query: 142 LRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           +RPD +    V KAC    +LV  KKIH   ++ GF  D+ +  +L+ M+ +    N AR
Sbjct: 73  VRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGAR 132

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
            +FDDM V+D  SW +M   Y   G   + + +  EM L G+  + +TV+SILP CA  D
Sbjct: 133 CVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--D 190

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            I  G  +H +I+++ +E N++VS+ L+NMYA    ++ A  VFD M  RD+VSWN ++ 
Sbjct: 191 YIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLT 250

Query: 319 AY-----------------------------------EQSNDPITAHGFFTTMQQAGIQP 343
           AY                                    Q+     A G    MQ +GI+P
Sbjct: 251 AYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKP 310

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +T+VS       L   R  + +HG++ R  WF+EDV I  A+V +YAK G +  +  V
Sbjct: 311 NRITIVSALPGCTNLESLRGGKEIHGYVFRH-WFIEDVTITTALVLLYAKCGDLELSRHV 369

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  +P KDV++WNT+I   + +G   E++ +F  M +   + PN  T++ +L   SH   
Sbjct: 370 FNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSG-VEPNSVTFIGVLSGCSHSQL 428

Query: 464 LRQGIKI-HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
             +G+ + ++   ++ +  D    +C+VD+  + GR+++A     ++P
Sbjct: 429 ADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMP 476



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 185/390 (47%), Gaps = 51/390 (13%)

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           S  LI      G ++ AL +FD++ E D+ +W  +I+ + Q   P  A   ++T+    +
Sbjct: 14  SIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNV 73

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD   L+S+    A   D   ++ +H   ++ G F +D+++GNA++DM+ K   +N A 
Sbjct: 74  RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFG-FNKDLVLGNALIDMFGKCKFVNGAR 132

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+ + VKDV+SW ++   Y   G+  + I +F+ M   N I  N  T  SILPA +  
Sbjct: 133 CVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREM-GLNGIRANSLTVSSILPACADY 191

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYG-----KCGRI----------------- 499
             ++ G ++H  +++N +  +V+V++ LV+MY      K  R+                 
Sbjct: 192 --IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVML 249

Query: 500 ---------DDAMSLFYQVPRS----SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
                    +  + LF+Q+ +     +   WNA IS    +GQ + AL    +M D G++
Sbjct: 250 TAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIK 309

Query: 547 PDHITFVSLLTACSH-----SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           P+ IT VS L  C++      G    G  + H   E+  I   L      V L+ + G L
Sbjct: 310 PNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTAL------VLLYAKCGDL 363

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            ++ +    MP R D   W  ++ A  +HG
Sbjct: 364 ELSRHVFNTMP-RKDVVAWNTMIMANSMHG 392



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 181/389 (46%), Gaps = 49/389 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H   +  G  K +     L++ +     ++ +R  FD +  ++V +W SM   YV C
Sbjct: 97  KKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNC 156

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-GKKIHCSVLKLGFEWDVFVAA 182
           G   + +  F +  L +G+R +  T   +L AC + +  G+++H  +L+   E +V+V++
Sbjct: 157 GMCRQGILLFREMGL-NGIRANSLTVSSILPACADYIKLGREVHGFILRNEMEGNVYVSS 215

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRD---------------------------------- 208
           +L++MY        AR +FD M  RD                                  
Sbjct: 216 ALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKL 275

Query: 209 -SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
              SWNA ISG  Q+G    AL IL +M+  G+  + IT+ S LP C   +++  G  IH
Sbjct: 276 NQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIH 335

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            Y+ +H    ++ ++  L+ +YAK G +  +  VF+ M  +DVV+WN++I A        
Sbjct: 336 GYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGG 395

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR-SVHGFIMRRGWFMEDVIIGNA 386
            +   F  M  +G++P+ +T + +      L+ C +S+ +  G ++      E  I  +A
Sbjct: 396 ESLILFNKMLDSGVEPNSVTFIGV------LSGCSHSQLADEGLLVFNSMSSEHSITPDA 449

Query: 387 -----VVDMYAKLGIINSACAVFEGLPVK 410
                +VD+ ++ G +  A      +P++
Sbjct: 450 DHYSCMVDVLSRAGRLEEAYDFIRKMPIE 478



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 57  CTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           CT L  +   K +H  +     I+ V  +T LV  YA  GDL  SRH F+ +  ++V  W
Sbjct: 322 CTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAW 381

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
           N+MI      G+  E++  F +  L SG+ P+  TF  VL  C
Sbjct: 382 NTMIMANSMHGKGGESLILFNKM-LDSGVEPNSVTFIGVLSGC 423


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/587 (39%), Positives = 360/587 (61%), Gaps = 16/587 (2%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHG--------LEFNLFVSNNLINMYAKFGM 294
           DP+++  ++ +C R      G LIH ++  HG            +FVSN+L++MYAKFG+
Sbjct: 71  DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGL 130

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSND-PITAHGFFTTMQQAGIQPDLLTLVSLTS 353
           +  ALR+FD+M ER+VV+W +++AA   ++     A  F   M + G+ P+  T    +S
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTF---SS 187

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
           ++          ++H   ++ G    DV + ++++D Y KLG ++    VF+ +  +D++
Sbjct: 188 VLGACGTPGVLAALHASTVKVG-LDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLV 246

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
            WN++I G+AQ+G    AIE+F  M++    + NQGT  S+L A + +  L  G ++HA 
Sbjct: 247 VWNSIIAGFAQSGDGVGAIELFMRMKDAG-FSANQGTLTSVLRACTGMVMLEAGRQVHAH 305

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           V+K     D+ +   L+DMY KCG ++DA +LF+++P+   + W+ +IS    +G+  +A
Sbjct: 306 VLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEA 363

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L  F  M  EGV P+ IT V +L ACSH+GLV +G  YF  M++ FGI+P  +H+ CMVD
Sbjct: 364 LRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVD 423

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L GRAG L  A  FI++M + PDA IW  LLGACR+H +  L A A+  + +++ ++ G 
Sbjct: 424 LLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGA 483

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
            VL+SN YA++ +W   ++     RDRG+KK PG S IE+   V +F  G+ +HP  + I
Sbjct: 484 RVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTI 543

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
             EL  L  ++ +LGYVP   FVLQD+  ++KE +L  HSE++AIAFG + +    PI+I
Sbjct: 544 VQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRI 603

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KNLR+CGDCH + K +S+   R II+RD  RFHHF+DG CSCGDYW
Sbjct: 604 MKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 181/354 (51%), Gaps = 27/354 (7%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC-GRLSEAVDCFYQFT 137
           +F S  LV+ YA  G L  +   FD +  RNV TW ++++      GR  EA+  F    
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALR-FLVAM 173

Query: 138 LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
              G+ P+ YTF  VL AC        +H S +K+G + DVFV +SL+  Y + G  +  
Sbjct: 174 WRDGVAPNAYTFSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGG 233

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++FD+M  RD   WN++I+G+ QSG+ V A+++   M+  G S +  T+ S+L  C   
Sbjct: 234 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGM 293

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             + +G  +H +++K+  E +L + N L++MY K G +  A  +F +M +RDV+SW+++I
Sbjct: 294 VMLEAGRQVHAHVLKY--ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMI 351

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           +   Q+     A   F  M+  G+ P+ +T+V +      L  C      H  ++  GW+
Sbjct: 352 SGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGV------LFACS-----HAGLVEDGWY 400

Query: 378 M---EDVIIG--------NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
                  + G        N +VD+  + G ++ A      + ++ D + W TL+
Sbjct: 401 YFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLL 454



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 8/275 (2%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  +  +C     +  LHA  V  G    VF  + L++ Y  LGDL   R  FD +  R+
Sbjct: 185 FSSVLGACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRD 244

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIH 166
           +  WNS+I+ + + G    A++ F +    +G   +  T   VL+AC  +V    G+++H
Sbjct: 245 LVVWNSIIAGFAQSGDGVGAIELFMRMK-DAGFSANQGTLTSVLRACTGMVMLEAGRQVH 303

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             VLK  +E D+ +  +LL MYC+ G    A  LF  MP RD  SW+ MISG  Q+G + 
Sbjct: 304 AHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSA 361

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNL 285
           EAL + D M+ EGV+ + IT+  +L  C+ +  +  G      + K  G++      N +
Sbjct: 362 EALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCM 421

Query: 286 INMYAKFGMMRHALR-VFDQMMERDVVSWNSIIAA 319
           +++  + G +  A+  + D  +E D V W +++ A
Sbjct: 422 VDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGA 456


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/574 (40%), Positives = 357/574 (62%), Gaps = 3/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + ++L    RS ++  GL +H +I+K GL+    VS+NLIN+Y+K  +   +L+VFD+  
Sbjct: 28  ICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETP 87

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ++   +W+S+I+A+ Q+  P+ A  FF  M   G++PD     S T     L      +S
Sbjct: 88  KKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKS 147

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH   ++ G++  DV +G+++VDMYAK G I  A  +F+ +P ++V+SW+ +I GYAQ  
Sbjct: 148 VHCLAVKTGYYC-DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLD 206

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              EA+ +F+      +++ N  T+ S++   S    L  G  IH   +K       FV 
Sbjct: 207 DGVEALTLFKQ-ALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVG 265

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + L+ +Y KCG I+ A  +F ++P  +   WN+++     H    +    F +M + G++
Sbjct: 266 SALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMK 325

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ I F+S+L ACSH+GLV +G+ YF +M++ +GI+P  +HY  +VDL GRAG L  A +
Sbjct: 326 PNFIXFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVS 384

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I+ MP+RP  S+WGALL  CRIH + E+ A  +DR+ E+DS + G +VL+SN YA  G+
Sbjct: 385 VIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGR 444

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           +E    +R + RDRG+KK  G S +E  NKV  F  G+R+H K+ +IY++L  L  +M+ 
Sbjct: 445 YEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEK 504

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GYV D SFVL+ V+ +EK   +  HSERLAIAFG+I+ PP  PI++ KNLRVCGDCH  
Sbjct: 505 AGYVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAA 564

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KF+S+   R +IVRD+NRFH F+DG CSCGDYW
Sbjct: 565 IKFMSKCCGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 208/422 (49%), Gaps = 10/422 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     L    +LHA ++  G       S  L+N Y+      FS   FD    ++  TW
Sbjct: 35  FTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTW 94

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           +S+IS + +      A+  F++  L  G+RPD + +P   KAC   R    GK +HC  +
Sbjct: 95  SSVISAFAQNEAPLLALQ-FFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAV 153

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G+  DVFV +SL+ MY + G    AR LFD+MP R+  SW+ MI GY Q  + VEAL 
Sbjct: 154 KTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALT 213

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +  +  +E V ++  T +S++ VC+ S  +  G LIH   +K   + + FV + LI++Y+
Sbjct: 214 LFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYS 273

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G++  A +VFD++  R++  WNS++ A  Q        G F  M   G++P+ +  +S
Sbjct: 274 KCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLS 333

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPV 409
           +    +        R    F + R + +E      A +VD+  + G +  A +V + +P+
Sbjct: 334 VLYACSHAGLVEKGREY--FSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPM 391

Query: 410 KDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           +   S W  L+TG   +     A  V   + E +  + + G +V +  AY+  G   +  
Sbjct: 392 RPTESVWGALLTGCRIHKDTEMAAFVADRILEMD--SSSSGLHVLLSNAYAAAGRYEEAA 449

Query: 469 KI 470
           ++
Sbjct: 450 RM 451



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 5/220 (2%)

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
            S AI+  Q     N    N     ++L +++   +LRQG+++HA ++K  L     V+ 
Sbjct: 5   TSTAIKPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSH 64

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+++Y K      ++ +F + P+ SS  W+++IS    +     AL FFR+ML++GVRP
Sbjct: 65  NLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRP 124

Query: 548 DHITFVSLLTACSHSGLV--SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           D   + S   AC   G +  S+  +  H +  + G    +     +VD++ + G +G A 
Sbjct: 125 DDHIYPSATKAC---GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDAR 181

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +    MP R   S  G + G  ++   +E   +    L E
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIE 221


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/593 (38%), Positives = 351/593 (59%), Gaps = 3/593 (0%)

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
            L  LD +    ++  P    SI+  CA+S N+     IH ++ +  L  + F+ N+LI+
Sbjct: 46  GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MY K G +  A  VFD +  RDVVSW  +I  Y Q++ P  A G    M +A  +P   T
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             S                +H   ++     EDV +G+A++DMYA+   ++ A  VF+ L
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYN-LDEDVYVGSALLDMYARCQQMDMAIRVFDWL 224

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             K+ +SWN LI G+A+ G     +  F  M+  N       TY S+  A + +GAL QG
Sbjct: 225 DSKNEVSWNALIAGFARKGDGETTLMKFAEMQR-NGFGATHFTYSSVFSALARIGALEQG 283

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +HA +IK+      FVA  ++ MY K G + DA  +F +V +   V WN +++    +
Sbjct: 284 RWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQY 343

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +A+  F ++   G++ + ITF+S+LTACSH GLV EG++YF MM++ + ++P + H
Sbjct: 344 GLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDH 402

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y   VDL GRAG L  A  F+  MP+ P A++WGALLGACR+H N ++G  A+D +FE+D
Sbjct: 403 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELD 462

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            E+ G  VL+ NIYA+ G+W+    VR + +  G+KK P  S +E+ N V +F   + TH
Sbjct: 463 PEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTH 522

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           PK E+IY     +  ++K  GYVP+  +VL  ++E E+E  L  HSE++A+AF +I+ P 
Sbjct: 523 PKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPA 582

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + I+I KN+R+CGDCH+  +++S++ +REI+VRD+NRFHHF +G CSCGDYW
Sbjct: 583 GATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 203/394 (51%), Gaps = 6/394 (1%)

Query: 138 LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           LT  L P    +  ++ AC   +NL   + IH  + +     D F+  SL+HMYC+ G  
Sbjct: 54  LTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAV 113

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
           + AR +FD +P RD  SW  +I+GY Q+    EAL +L +M          T  S L   
Sbjct: 114 SDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAA 173

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
                   G  +H   VK+ L+ +++V + L++MYA+   M  A+RVFD +  ++ VSWN
Sbjct: 174 GACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWN 233

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++IA + +  D  T    F  MQ+ G      T  S+ S +A++      R VH  +++ 
Sbjct: 234 ALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKS 293

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G  +    + N ++ MYAK G +  A  VF+ +  +D+++WNT++T +AQ GL  EA+  
Sbjct: 294 GQKLT-AFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAH 352

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F+ + +   I  NQ T++S+L A SH G +++G +    +    +  ++      VD+ G
Sbjct: 353 FEEIRKYG-IQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLG 411

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           + G + +A+   +++P   ++  W A++    +H
Sbjct: 412 RAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 445



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 188/378 (49%), Gaps = 11/378 (2%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  +  +C +   L   + +H+ L  S      F    L++ Y   G +S +RH FD I 
Sbjct: 65  YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK---ACRNLVDGK 163
            R+V +W  +I+ Y +    +EA+       L +  RP  +TF   LK   AC     G+
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDM-LRARFRPSGFTFTSFLKAAGACGGRGIGE 183

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K   + DV+V ++LL MY R    ++A ++FD +  ++  SWNA+I+G+ + G
Sbjct: 184 QMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKG 243

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
           +    L    EM+  G      T +S+    AR   +  G  +H +++K G +   FV+N
Sbjct: 244 DGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVAN 303

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            ++ MYAK G M  A +VFD++ +RD+V+WN+++ A+ Q      A   F  +++ GIQ 
Sbjct: 304 TILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQL 363

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-AVVDMYAKLGIINSACA 402
           + +T +S+ +  +     +  +    F M + + +E  I    + VD+  + G++  A  
Sbjct: 364 NQITFLSVLTACSHGGLVKEGKQY--FDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALI 421

Query: 403 VFEGLPVKDVIS-WNTLI 419
               +P++   + W  L+
Sbjct: 422 FVFKMPMEPTAAVWGALL 439



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 6/166 (3%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   + +HA ++ SG+  T F +  ++  YA  G +  +R  FD +  R++ TWN+M++ 
Sbjct: 280 LEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTA 339

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW 176
           + + G   EAV  F +     G++ +  TF  VL AC +   + +GK+    +     E 
Sbjct: 340 FAQYGLGKEAVAHFEEIR-KYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEP 398

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
           ++    S + +  R GL   A      MP+  + + W A++ G C+
Sbjct: 399 EIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL-GACR 443


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/568 (41%), Positives = 351/568 (61%), Gaps = 7/568 (1%)

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
            RS ++L G  IH +I+K GL+    V + LIN Y+K  +   + +VF++   +   +W+
Sbjct: 65  TRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWS 124

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           S+I+++ Q+ +P+ A  +F  M    + PD     S T   A L  C   +SVH  +++ 
Sbjct: 125 SVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKT 184

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G+ + DV +G+++VDMYAK G I  A  VF+ +P ++V+SW+ +I GY Q G   EA+ +
Sbjct: 185 GYDV-DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRL 243

Query: 435 FQ--MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
           F+  ++E    ++ N  T  S++        L  G +IH    K       FV + L+ +
Sbjct: 244 FKEALLEG---LDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISL 300

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCG I+ A  +F +VP  +   WNA++     H    +A + F +M + G+RP+ ITF
Sbjct: 301 YSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITF 360

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           + +L ACSH+GLV EG++YF +M++ + I+P  +HY  MVDL GRAG L  A + I+ MP
Sbjct: 361 LCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMP 419

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
             P  S+WGA +  CRIHGN +L A A+D++FE+ + + G +V++SN YA  G++E   +
Sbjct: 420 TEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAK 479

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
            R + RDRG+KK  G S IE  N+V  F  G+R H + ++IY +L +L  +M+  GYV D
Sbjct: 480 ARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVAD 539

Query: 733 KSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQ 792
            SFVL++V  +EK   +  HSERLAIAFG+IS P   PI+I KNLRVCGDCHN  KFIS+
Sbjct: 540 TSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISK 599

Query: 793 ITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ R IIVRD+NRFH F+DG CSC DYW
Sbjct: 600 LSGRVIIVRDNNRFHRFEDGKCSCADYW 627



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 217/443 (48%), Gaps = 13/443 (2%)

Query: 35  QISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           Q SP+   +E +     DL  S T+   L   +++HA ++ SG          L+NFY+ 
Sbjct: 42  QNSPNRFCSEKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSK 101

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
                 S   F+    ++  TW+S+IS + +      A+  F +  +   L PD + FP 
Sbjct: 102 TQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRM-IGENLCPDDHIFPS 160

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
             KAC  L     GK +HC V+K G++ DVFV +SL+ MY + G    AR +FD+MP R+
Sbjct: 161 ATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRN 220

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW+ MI GY Q G   EA+ +  E  LEG+ ++  T++S++ VC  +  +  G  IH 
Sbjct: 221 VVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHG 280

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
              K   + + FV ++LI++Y+K G++  A RVFD++  +++  WN+++ A  Q      
Sbjct: 281 LCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKE 340

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA-V 387
           A   FT M+ AG++P+ +T + +    +        +    F + + + +E      A +
Sbjct: 341 AFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKY--FALMKKYEIEPGTQHYASM 398

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           VD+  + G +  A +V +G+P +   S W   ITG   +G    A      + E   +  
Sbjct: 399 VDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAV-- 456

Query: 447 NQGTYVSILPAYSHVGALRQGIK 469
           + G +V +  AY+  G      K
Sbjct: 457 SSGLHVMLSNAYAAAGRYEDAAK 479



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 1/197 (0%)

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
           G    +L + +   +L +G +IHA +IK+ L     V   L++ Y K      +  +F +
Sbjct: 55  GHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEE 114

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
             R SS  W+++IS    + +   A+ +F +M+ E + PD   F S   AC+  G    G
Sbjct: 115 SERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVG 174

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
            +  H +  + G    +     +VD++ + G +  A N    MP R   S  G + G  +
Sbjct: 175 -KSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQ 233

Query: 629 IHGNMELGAVASDRLFE 645
           +  + E   +  + L E
Sbjct: 234 LGEHEEAMRLFKEALLE 250


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/617 (37%), Positives = 341/617 (55%), Gaps = 72/617 (11%)

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G+  + FV+++L++ Y +FG    A  V D M  R VV W+++IAA+    D   A G  
Sbjct: 50  GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109

Query: 334 TTMQQAGIQPDLLTLVSLTS-----------------------------------IVAQL 358
             M+  G++P+++T   L S                                    V  +
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
            D      +HG++++ G  + D  +  A++DMY K G  +    VF+     DV S N L
Sbjct: 170 GDVAVGEQLHGYVVKAGCRL-DACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNAL 228

Query: 419 ITGYA-----------------------------------QNGLASEAIEVFQMMEECNE 443
           + G +                                   QNG   EA+++F+ M+    
Sbjct: 229 VAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQS-EG 287

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           I PN  T   +LPA++++ AL  G   H   ++     D++V + LVDMY KCGR+ DA 
Sbjct: 288 IEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDAR 347

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F  +P  + V WNA+I  + +HG+ + A+  FR M     +PD +TF  +L ACS +G
Sbjct: 348 MIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAG 407

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
              EG+ YF+ MQ + GI P ++HY CMV L GRAG L  A++ I  MP  PD  IWG+L
Sbjct: 408 WTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSL 467

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           LG+CR+HGN+ L  VA++ LF+++ EN G YVL+SNIYA+   W+GV+ +R + +  GLK
Sbjct: 468 LGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLK 527

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K  G S IE+ NKV +   G+ +HP    I ++L++LT +M+ LG+ P   +VL DVEE 
Sbjct: 528 KEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQ 587

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EK+ IL+ HSE+LA+A G+IS+   +P+Q+ KNLR+CGDCH   KFIS    REI VRD+
Sbjct: 588 EKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDT 647

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHFKDG CSC DYW
Sbjct: 648 NRFHHFKDGKCSCADYW 664



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 232/523 (44%), Gaps = 87/523 (16%)

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           PD    P  LK+C  L   + +H +    G   D FVA+SLLH Y RFG    AR + D 
Sbjct: 21  PDPRLLPSALKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSVLDG 80

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS----DN 259
           MP R    W+A+I+ +   G+A  A  +L+ MR +GV  + IT   ++    RS    D 
Sbjct: 81  MPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDA 140

Query: 260 ILS-------------------------------GLLIHLYIVKHGLEFNLFVSNNLINM 288
           +L+                               G  +H Y+VK G   +  V+  LI+M
Sbjct: 141 VLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDM 200

Query: 289 YAKFGMMRHALRVFDQM-----------------------------------MERDVVSW 313
           Y K G     +RVFD+                                    +E +VVSW
Sbjct: 201 YGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSW 260

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
            SI+A   Q+   + A   F  MQ  GI+P+ +T+  +    A +    + RS H F +R
Sbjct: 261 TSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLR 320

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
           +G F  D+ +G+A+VDMYAK G +  A  +FE +P ++V+SWN +I GYA +G A  A+ 
Sbjct: 321 KG-FHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVR 379

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDM 492
           +F+ M+   E  P+  T+  +L A S  G   +G      +  K+ +   +    C+V +
Sbjct: 380 LFRSMQSSKE-KPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTL 438

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ----GDKALNFFRQMLDEGVRP 547
            G+ G++DDA  +  Q+P       W +++    +HG        A N F+      + P
Sbjct: 439 LGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQ------LEP 492

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           ++     LL+    S  + +G      M +  G+K   K  GC
Sbjct: 493 ENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLK---KEKGC 532



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 189/431 (43%), Gaps = 56/431 (12%)

Query: 77  KTVFSSTKLVNFYANLGDLS-----FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
           +TV   + L+  +A+ GD         R   D +   NV TWN ++S   R GR  +AV 
Sbjct: 84  RTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVE-PNVITWNGLVSGLNRSGRARDAVL 142

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMY 188
              +     G  PD       L A  ++ D   G+++H  V+K G   D  VA +L+ MY
Sbjct: 143 ALVRMH-GEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMY 201

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGY----------------------------- 219
            + G A+   ++FD+    D  S NA+++G                              
Sbjct: 202 GKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWT 261

Query: 220 ------CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
                  Q+G  +EA+D+  EM+ EG+  + +T+  +LP  A    ++ G   H + ++ 
Sbjct: 262 SIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRK 321

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G   +++V + L++MYAK G +R A  +F+ M  R+VVSWN++I  Y    +   A   F
Sbjct: 322 GFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLF 381

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
            +MQ +  +PDL+T   +    +Q       RS    +  +      +     +V +  +
Sbjct: 382 RSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGR 441

Query: 394 LGIINSACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIE-VFQMMEECNEINPNQ 448
            G ++ A  +   +P + D   W +L+     +G   LA  A E +FQ+  E      N 
Sbjct: 442 AGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPE------NA 495

Query: 449 GTYVSILPAYS 459
           G YV +   Y+
Sbjct: 496 GNYVLLSNIYA 506



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 6/180 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F +   L H +  H   +  G    ++  + LV+ YA  G +  +R  F+ + YRNV +W
Sbjct: 302 FANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSW 361

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL 170
           N+MI  Y   G    AV  F     +S  +PD  TF  VL AC       +G+     + 
Sbjct: 362 NAMIGGYAMHGEAENAVRLFRSMQ-SSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQ 420

Query: 171 -KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEA 228
            K G    +   A ++ +  R G  + A  + + MP    G  W +++      GN V A
Sbjct: 421 HKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLA 480


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/633 (37%), Positives = 366/633 (57%), Gaps = 9/633 (1%)

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
           F L  +  + F   P          IS  C +G   EAL    EM + G  M      ++
Sbjct: 2   FNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDAL 58

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L  C     +  G  +H +++K       ++   L+  Y K   +  A +V D+M E++V
Sbjct: 59  LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSW ++I+ Y Q+     A   F  M ++  +P+  T  ++ +   + +     + +HG 
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178

Query: 371 IMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           I++  W +   + +G++++DMYAK G I  A  +FE LP +DV+S   +I GYAQ GL  
Sbjct: 179 IVK--WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA+E+F  +     ++PN  TY S+L A S +  L  G + H  V++  L F   +   L
Sbjct: 237 EALEMFHRLHS-EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPD 548
           +DMY KCG +  A  LF  +P  +++ WNA++  +  HG G + L  FR M DE  V+PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355

Query: 549 HITFVSLLTACSHSGLVSEGQRYFH-MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
            +T +++L+ CSH  +   G   F  M+  E+G KP  +HYGC+VD+ GRAG +  A  F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I+ MP +P A + G+LLGACR+H ++++G     RL E++ EN G YV++SN+YA+ G+W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
             V+ VR++   + + K PG S I+    +  F+  +RTHP+ E++  +++ ++ KMK  
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GYVPD S VL DV+E++KE +L  HSE+LA+ FG+I++    PI++FKNLR+C DCHN+ 
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K  S++ ERE+ +RD NRFH   DGICSCGDYW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 214/417 (51%), Gaps = 32/417 (7%)

Query: 111 YTWNSMISVYVRC--GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKI 165
           Y   +++ +   C  GRL EA+          G    F+ +  +L AC   R L DG+++
Sbjct: 19  YVLQTILPISQLCSNGRLQEALLEMAMLGPEMG----FHGYDALLNACLDKRALRDGQRV 74

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++K  +    ++   LL  Y +      ARK+ D+MP ++  SW AMIS Y Q+G++
Sbjct: 75  HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 134

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EAL +  EM       +  T A++L  C R+  +  G  IH  IVK   + ++FV ++L
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL 194

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MYAK G ++ A  +F+ + ERDVVS  +IIA Y Q      A   F  +   G+ P+ 
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T  SL + ++ L    + +  H  ++RR       ++ N+++DMY+K G ++ A  +F+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYARRLFD 313

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P +  ISWN ++ GY+++GL  E +E+F++M +   + P+  T +++L   SH     
Sbjct: 314 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMED 373

Query: 466 QGIKIHARVIKNCLCFDVFVA------------TCLVDMYGKCGRIDDAMSLFYQVP 510
            G+ I          FD  VA             C+VDM G+ GRID+A     ++P
Sbjct: 374 TGLNI----------FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 212/433 (48%), Gaps = 34/433 (7%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +D L  +C     L   +R+HA ++ +  +   +  T+L+ FY     L  +R   D + 
Sbjct: 55  YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            +NV +W +MIS Y + G  SEA+  F +   + G +P+ +TF  VL +C     L  GK
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGK 173

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           +IH  ++K  ++  +FV +SLL MY + G    AR++F+ +P RD  S  A+I+GY Q G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              EAL++   +  EG+S + +T AS+L   +    +  G   H ++++  L F   + N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQ 342
           +LI+MY+K G + +A R+FD M ER  +SWN+++  Y +          F  M+ +  ++
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA------------VVDM 390
           PD +TL+++      L+ C      HG +   G  + D ++               +VDM
Sbjct: 354 PDAVTLLAV------LSGCS-----HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQG 449
             + G I+ A    + +P K        + G  +  L+ +  E   +     EI P N G
Sbjct: 403 LGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE--SVGRRLIEIEPENAG 460

Query: 450 TYVSILPAYSHVG 462
            YV +   Y+  G
Sbjct: 461 NYVILSNLYASAG 473


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/668 (37%), Positives = 376/668 (56%), Gaps = 17/668 (2%)

Query: 162 GKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+ +H  ++K L      F+A  L++MY +      AR +    P R+  SW +++SG  
Sbjct: 25  GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLA 84

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+G+   AL    EMR EGV+ +  T   +    A     ++G  IH   VK G   ++F
Sbjct: 85  QNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVF 144

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +  +MY K  +   A ++FD++ ER++ +WN+ I+       P  A   F   ++ G
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIG 204

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNS------RSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            QP+ +T          LN C +         +HG + R G F  DV + N ++D Y K 
Sbjct: 205 GQPNSITFCGF------LNACSDGLLLDLGMQMHGLVFRSG-FDTDVSVYNGLIDFYGKC 257

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
             I S+  +F  + +K+ +SW +L+  Y QN    E   V  +      +  +     S+
Sbjct: 258 KQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNH-EDEKASVLYLRSRKEIVETSDFMISSV 316

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A + +  L  G  IHA  +K C+  ++FV + LVDMYGKCG I+D+   F ++P  + 
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNL 376

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGV--RPDHITFVSLLTACSHSGLVSEGQRYF 572
           V  N++I  +   GQ D AL  F  M   G    P+++TFVSLL+ACS +G V  G + F
Sbjct: 377 VTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIF 436

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             M+  +GI+P  +HY C+VD+ GRAG +  A  FI+ MP++P  S+WGAL  ACR+HG 
Sbjct: 437 DSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGK 496

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
             LG +A++ LF++D ++ G +VL+SN +A  G+W   + VR   +  G+KK  G+S I 
Sbjct: 497 PHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWIT 556

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
           V N+V  F   +R+H   ++I   L  L  KM++ GY PD    L D+EE+EK   ++ H
Sbjct: 557 VKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHH 616

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SE+LA+AFG+++ P   PI+I KNLR+CGDCH++ KF+S   +REIIVRD+NRFH FKDG
Sbjct: 617 SEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDG 676

Query: 813 ICSCGDYW 820
           ICSC DYW
Sbjct: 677 ICSCKDYW 684



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 235/469 (50%), Gaps = 34/469 (7%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F +  L+N Y+ L     +R        RNV +W S++S   + G  S A+  F++    
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMR-R 101

Query: 140 SGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            G+ P+ +TFP V KA  +L   V GK+IH   +K G   DVFV  S   MYC+  L + 
Sbjct: 102 EGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           ARKLFD++P R+  +WNA IS     G   EA++   E R  G   + IT    L  C  
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNAC-- 219

Query: 257 SDNIL--SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           SD +L   G+ +H  + + G + ++ V N LI+ Y K   +R +  +F +M  ++ VSW 
Sbjct: 220 SDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWC 279

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           S++AAY Q+++   A   +   ++  ++     + S+ S  A +      RS+H   + +
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-K 338

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
                ++ +G+A+VDMY K G I  +   F+ +P K++++ N+LI GYA  G    A+ +
Sbjct: 339 ACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALAL 398

Query: 435 FQMMEE--CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----- 487
           F+ M    C    PN  T+VS+L A S  GA+  G+KI          FD   +T     
Sbjct: 399 FEDMAPRGCGPA-PNYMTFVSLLSACSRAGAVENGMKI----------FDSMKSTYGIEP 447

Query: 488 ------CLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
                 C+VDM G+ G ++ A     ++P   ++  W A+ +   +HG+
Sbjct: 448 GAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGK 496



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 174/361 (48%), Gaps = 7/361 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++HAL V  G+I  VF      + Y        +R  FD I  RN+ TWN+ IS  V  
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTD 187

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKLGFEWDVFV 180
           GR  EA++ F +F    G +P+  TF   L AC +  L+D G ++H  V + GF+ DV V
Sbjct: 188 GRPKEAIEAFIEFRRIGG-QPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSV 246

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              L+  Y +      +  +F +M ++++ SW ++++ Y Q+    +A  +    R E V
Sbjct: 247 YNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIV 306

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                 ++S+L  CA    +  G  IH + VK  +E N+FV + L++MY K G +  + +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQ 366

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQL 358
            FD+M E+++V+ NS+I  Y        A   F  M  +  G  P+ +T VSL S  ++ 
Sbjct: 367 AFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRA 426

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNT 417
               N   +   +             + +VDM  + G++  A    + +P+K  IS W  
Sbjct: 427 GAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGA 486

Query: 418 L 418
           L
Sbjct: 487 L 487


>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
 gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/587 (38%), Positives = 348/587 (59%), Gaps = 33/587 (5%)

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           +IH ++++    F++F ++ LI++     ++ +A +VF Q+   ++  +NS I  +  S 
Sbjct: 33  IIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSK 92

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           DP  +  F+   ++ G+ PD LT   L     Q          HG I+R G F  DV + 
Sbjct: 93  DPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHG-FDSDVYVQ 151

Query: 385 NAVVDMYAKLGIINSACAVF-------------------------------EGLPVKDVI 413
           N++V MY+ LG I SA  VF                               + +P K+++
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +W+ +I+GYA+N    +AIE++ +++    ++ N+   VS++ + +H+GAL  G + H  
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQS-EGVHANETVMVSVIASCAHLGALELGERAHDY 270

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           +++N +  ++ + T LVDMY +CG ID A+ +F Q+P   ++ W  +I+   +HG  +KA
Sbjct: 271 ILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKA 330

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L +F +M   G+ P  ITF ++L+ACSH GLV  G   F  M+ ++ I+P L+HYGCMVD
Sbjct: 331 LEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVD 390

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L GRAG L  A  F+  MP++P+A IWGALLGACRIH N E+   A   L E+  E+ GY
Sbjct: 391 LLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGY 450

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YVL+SNIYA   KWE V+ +R + ++RG+ K PG++  E++ KV  F  G++THP+ ++I
Sbjct: 451 YVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQI 510

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
                 +  K++  GY  +    L D++E+EKE  +  HSE+LAIA+ I+ +    PI+I
Sbjct: 511 ERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRI 570

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KNLRVC DCH  TK IS++ ERE+IVRD NRFHHFK G CSC DYW
Sbjct: 571 VKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 249/535 (46%), Gaps = 54/535 (10%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           L++C  L   K IH  +++    +DVF A+ L+ +     L + A ++F  +   +   +
Sbjct: 22  LESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIY 81

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N+ I G+  S +  ++     + +  G+  D +T   ++  C +  ++  G+  H  I++
Sbjct: 82  NSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIR 141

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
           HG + +++V N+L+ MY+  G ++ A  VF ++   DVVSW S++A Y +S D  +A   
Sbjct: 142 HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKL 201

Query: 333 FTTM-------------------------------QQAGIQPDLLTLVSLTSIVAQLNDC 361
           F  M                               Q  G+  +   +VS+ +  A L   
Sbjct: 202 FDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGAL 261

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                 H +I+R    + ++I+G A+VDMYA+ G I+ A  VF+ LP +D +SW TLI G
Sbjct: 262 ELGERAHDYILRNKMTV-NLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAG 320

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           +A +G A +A+E F  ME+   + P + T+ ++L A SH G + +G+++   + ++    
Sbjct: 321 FAMHGYAEKALEYFSRMEKAG-LTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIE 379

Query: 482 DVFV-ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQ 539
                  C+VD+ G+ G++ +A     ++P   + P W A++    IH   + A    + 
Sbjct: 380 PRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKT 439

Query: 540 MLDEGVRPDHITFVSLLTAC-SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +++  ++P+H  +  LL+   + +      +    MM+E   +KP          LF   
Sbjct: 440 LIE--LKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKP------PGYTLFEMD 491

Query: 599 GHLGMAHNFIQNMPVRPD----ASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           G +   H F       P+      +W  +LG  R+ G         D LF++D E
Sbjct: 492 GKV---HKFTIGDKTHPEIQQIERMWEEILGKIRLAG---YTGNNDDALFDIDEE 540



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 175/357 (49%), Gaps = 46/357 (12%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
             +SCT L H+K +HA L+ +  I  VF+++ L++   N   L ++   F  I   N++ 
Sbjct: 21  FLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFI 80

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           +NS I  +       ++   FY  +  +GL PD  T+P ++KAC    +L  G + H  +
Sbjct: 81  YNSFIRGFSGSKDPDKSFH-FYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQI 139

Query: 170 LKLGFEWDVFVAASLLHMYC-------------------------------RFGLANVAR 198
           ++ GF+ DV+V  SL+ MY                                + G    AR
Sbjct: 140 IRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSAR 199

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           KLFD MP ++  +W+ MISGY ++    +A+++   ++ EGV  +   + S++  CA   
Sbjct: 200 KLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLG 259

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G   H YI+++ +  NL +   L++MYA+ G +  A+ VFDQ+  RD +SW ++IA
Sbjct: 260 ALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIA 319

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
            +        A  +F+ M++AG+ P  +T  ++ S  +           HG ++ RG
Sbjct: 320 GFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACS-----------HGGLVERG 365



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 23/171 (13%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +R H  ++ +     +   T LV+ YA  G +  +   FD +  R+  +W ++I+ +   
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------D 177
           G   +A++ F +    +GL P   TF  VL AC         H  +++ G E       D
Sbjct: 325 GYAEKALEYFSRME-KAGLTPREITFTAVLSACS--------HGGLVERGLELFESMKRD 375

Query: 178 VFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
             +   L H  C      R G    A K  ++MP++ +   W A++ G C+
Sbjct: 376 YRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALL-GACR 425


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/677 (37%), Positives = 386/677 (57%), Gaps = 10/677 (1%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +++ C   +++ D  KI    LK GF   +     L+  Y + G    ARK+FD++P
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R   +WN+MI+ Y ++G + EA+DI   M  +G+  D  T +S+    +    +  G  
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 266 IHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            H   V  G+   N+FV + L++MYAKFG MR A  V DQ++ +DVV + ++I  Y    
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +   +   F  M + GI+ +  TL S+      L D  + R +HG I++ G     V   
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG-LESAVASQ 316

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            +++ MY + G+++ +  VF+     + ++W ++I G  QNG    A+  F+ M   + I
Sbjct: 317 TSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLR-SSI 375

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN  T  S+L A S +  L QG +IHA V+K  L  D +V   L+D YGKCG  + A S
Sbjct: 376 TPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARS 435

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F  +     V  N++I  +  +G G +AL  F  M D G+ P+++T++ +L+AC+++GL
Sbjct: 436 VFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGL 495

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           + EG   F   +    I+    HY CMVDL GRAG L  A   I  + +  D  IW  LL
Sbjct: 496 LEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLL 554

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            ACRIHG++E+     +R+ ++  E+ G +VL+SN+YA+ G W  V E++S  R+  LKK
Sbjct: 555 SACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKK 614

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            P  S ++V  ++  F  G+ +HP +  I ++L  L  K+K LGYVPD  FVLQD++E++
Sbjct: 615 NPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEK 674

Query: 745 KEHILTSHSERLAIAFGIISSPPK-SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           K   L  HSE+LA+AF +  S  K + I+I KNLRVCGDCH W KF+S+I  R+II RD 
Sbjct: 675 KIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDV 734

Query: 804 NRFHHFKDGICSCGDYW 820
            RFHHF++G+CSCGDYW
Sbjct: 735 KRFHHFRNGLCSCGDYW 751



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 250/466 (53%), Gaps = 12/466 (2%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL++ Y   G + ++R  FD + +R++  WNSMI+ Y+R GR  EA+D  YQ  +  G+ 
Sbjct: 115 KLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAID-IYQRMVPDGIL 173

Query: 144 PDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARK 199
           PD +TF  V KA  +L    +G++ H   + LG    +VFV ++L+ MY +FG    AR 
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           + D +  +D   + A+I GY   G   E+L +   M  +G+  +  T++S+L  C   ++
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           + SG LIH  IVK GLE  +    +L+ MY + G++  +L+VF Q +  + V+W S+I  
Sbjct: 294 LTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVG 353

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
             Q+     A   F  M ++ I P+  TL S+    + L      + +H  +M+ G  + 
Sbjct: 354 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI- 412

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D  +G A++D Y K G    A +VF GL   DV+S N++I  YAQNG   EA+++F  M+
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 472

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKI--HARVIKNC-LCFDVFVATCLVDMYGKC 496
           +   + PN  T++ +L A ++ G L +G  I   AR   N  L  D +   C+VD+ G+ 
Sbjct: 473 DTG-LEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHY--ACMVDLLGRA 529

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           GR+ +A  L  QV  S  V W  ++S   IHG  + A     +++D
Sbjct: 530 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID 575



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 6/176 (3%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   K++HA+++  G     +    L++FY   G    +R  F+ +   +V + NS
Sbjct: 391 SLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNS 450

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           MI  Y + G   EA+  F     T GL P+  T+  VL AC N   L +G  I  S    
Sbjct: 451 MIYSYAQNGFGHEALQLFSGMKDT-GLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNS 509

Query: 173 G-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           G  E      A ++ +  R G    A  L + + + D   W  ++S  C+    VE
Sbjct: 510 GNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA-CRIHGDVE 564


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/555 (41%), Positives = 336/555 (60%), Gaps = 33/555 (5%)

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
           +A  +F  +   +V  WN+ + ++ + + P  A   F  +++  I PD  T   +    +
Sbjct: 65  YAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACS 124

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
           +L D RN + VHG++ + G    ++ + N +V +YA  G I  A  VF+ +P +DVI+WN
Sbjct: 125 RLLDVRNGKIVHGYVEKLG-LQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWN 183

Query: 417 -------------------------------TLITGYAQNGLASEAIEVFQMMEECNEIN 445
                                          ++I GYAQ G + EAI++F  ME+   + 
Sbjct: 184 IMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL- 242

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           PN+ T V++L A + +G L  G +IH    ++    ++ V   L+DMY KCG ++DA  +
Sbjct: 243 PNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRI 302

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F  +   + V W+A+I+    HG+ + AL  F +M++ GV+P+ +TF+ +L ACSH G+V
Sbjct: 303 FDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMV 362

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            +G++YF  M  ++GI P ++HYGCMVDLF RAG L  AH FI NMP+ P+  +WGALLG
Sbjct: 363 EKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLG 422

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
            C++H N++L   A+  L ++D  N GYYV++SNIYA  G+WE V  VR L RDRG+KKT
Sbjct: 423 GCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKT 482

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 745
           PGWSSI V   V  F  G+ THP+ E+I+     L  +MK  GYVP+ S VL D+EED+K
Sbjct: 483 PGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQK 542

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           E  L  HSE+LA+ FG+I + P + I+I KNLRVC DCH   K IS ++ REI+VRD NR
Sbjct: 543 EKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNR 602

Query: 806 FHHFKDGICSCGDYW 820
           FH FK+G CSCGDYW
Sbjct: 603 FHCFKNGSCSCGDYW 617



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 203/448 (45%), Gaps = 44/448 (9%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L  + T    +K+LHA L+ +    +    +++ +  A     S+++  F  +    V  
Sbjct: 21  LLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTH 80

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN+ +  +      ++A+  FY+      + PD YT   VLKAC  L+D   GK +H  V
Sbjct: 81  WNTCLRSFAEGDSPADAISLFYRLR-EFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYV 139

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN---------------- 213
            KLG + ++F+   ++H+Y   G   VARK+FD MP RD  +WN                
Sbjct: 140 EKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAY 199

Query: 214 ---------------AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
                          +MI GY Q G + EA+D+  EM   G+  + +TV ++L  CA   
Sbjct: 200 KLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMG 259

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           N++ G  IH +  + G E N+ V N LI+MY K G +  A R+FD M ER VVSW+++IA
Sbjct: 260 NLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
                     A   F  M   G++P+ +T + +    + +      R     + R    +
Sbjct: 320 GLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIV 379

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEV 434
             +     +VD++++ G++  A      +P+  + + W  L+ G   +    LA EA   
Sbjct: 380 PRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRH 439

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVG 462
              ++  N+     G YV +   Y+  G
Sbjct: 440 LSKLDPLND-----GYYVVLSNIYAEAG 462


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/574 (38%), Positives = 353/574 (61%), Gaps = 2/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V  IL +CA+   +L G   H  I+  GL+ +L  SN LINMY+K G +  A +VFD+M 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            R +VSWN++I +  Q+ +   A      MQ+ G      T+ S+    A        + 
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H F ++    + +V +  A++D+YAK G++  A  VFE +P + V++W+++  GY QN 
Sbjct: 187 LHAFAIKAAMDL-NVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           +  +A+ +F+   E   +  +Q    S++ A + + A+ +G +++A + K+  C ++FVA
Sbjct: 246 MYEQALALFRKAWETG-LKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVA 304

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + L+DMY KCG I+++  +F  V + + V WNA+IS    H +  + +  F +M   G+ 
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +TFVS+L+AC H GLV +GQ+YF +M +E  + P++ HY CMVD   RAG +  A++
Sbjct: 365 PNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYD 424

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I  +P    AS+WG+LL +CR HGN+EL  VA+ +LF+++  N G Y+L+SN+YA  GK
Sbjct: 425 LISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGK 484

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V ++R L ++  +KK  G S IE+ +KV +F  G R HPK  +IY +L  +  +++ 
Sbjct: 485 WDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQK 544

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
           LGY  +    L  V E  K+ +L  HSE+LA   G++  PP +PI+I KNLR+CGDCH++
Sbjct: 545 LGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSF 604

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            K  S+   R++IVRD+NRFHHFK+G CSCGD+W
Sbjct: 605 MKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 223/396 (56%), Gaps = 7/396 (1%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +LK C   + L+ GK  H  +L +G + D+  +  L++MY + G  + AR++FD+MP R 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN MI    Q+G   EALD+L +M+ EG      T++S+L  CA    +    L+H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           + +K  ++ N+FV+  L+++YAK G+M+ A+ VF+ M +R VV+W+S+ A Y Q+     
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F    + G++ D   + S+    A L      + V+  + + G F  ++ + ++++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG-FCSNIFVASSLI 308

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G I  +  VF  +  ++V+ WN +I+G +++  + E + +F+ M++   ++PN 
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG-LSPND 367

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
            T+VS+L A  H+G +++G K    + K + L  +VF  +C+VD   + G+I +A  L  
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 508 QVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLD 542
           ++P ++S   W ++++    HG  + A    +++ D
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFD 463



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 222/465 (47%), Gaps = 17/465 (3%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQI----SPDCLENESREIDF-DDLFQSCTK---LHH 62
           +R+ + L L       F++ ++S  I     P   +  +  + F  ++ + C K   L  
Sbjct: 23  KRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQ 82

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            K  HA +++ G    + +S  L+N Y+  G + F+R  FD +  R++ +WN+MI    +
Sbjct: 83  GKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVF 179
            G  +EA+D   Q     G     +T   VL AC     L + + +H   +K   + +VF
Sbjct: 143 NGEENEALDLLLQMQ-REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVF 201

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           VA +LL +Y + GL   A  +F+ MP R   +W++M +GY Q+    +AL +  +    G
Sbjct: 202 VATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETG 261

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +  D   ++S++  CA    ++ G  ++  + K G   N+FV+++LI+MYAK G +  + 
Sbjct: 262 LKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESY 321

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VF  + +R+VV WN++I+   +    +     F  MQQ G+ P+ +T VS+ S    + 
Sbjct: 322 KVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMG 381

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 418
             +  +     + +      +V   + +VD  ++ G I  A  +   LP     S W +L
Sbjct: 382 LVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSL 441

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           +     +G   E  EV    ++  +I P N G Y+ +   Y+  G
Sbjct: 442 LASCRTHG-NLELAEV--AAKKLFDIEPHNSGNYLLLSNMYAANG 483


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/712 (36%), Positives = 378/712 (53%), Gaps = 72/712 (10%)

Query: 181 AASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           A SL+  Y        A   FD +P   RD+   NA+IS Y ++ +A  A+ +   +   
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 239 G-VSMDPITVASILPVCARSDNI--LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG-- 293
           G +  D  +  ++L       NI       +H  ++K G    L V N L+ +Y K    
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESP 210

Query: 294 -MMRHALRVFDQMMERDVVSW-------------------------------NSIIAAYE 321
              R A +V D+M  +D ++W                               N++I+ Y 
Sbjct: 211 EATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYV 270

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-RGWFMED 380
            S   + A   F  M    +  D  T  S+ S  A +    + +SVHG I+R +  F+ +
Sbjct: 271 HSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPE 330

Query: 381 VI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
               + NA+V  Y+K G I  A  +F+ + +KDV+SWNT+++GY ++    +A+EVF+ M
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 439 EECNE------------------------------INPNQGTYVSILPAYSHVGALRQGI 468
              NE                              + P   TY   + A   +GAL+ G 
Sbjct: 391 PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGK 450

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           ++H  +++            L+ MY +CG + +A  +F  +P   SV WNA+IS  G HG
Sbjct: 451 QLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +AL  F +M+ EG+ PD I+F+++LTAC+HSGLV EG RYF  M+ +FGI P   HY
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY 570

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
             ++DL GRAG +G A + I+ MP  P  SIW A+L  CR  G+MELGA A+D+LF++  
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           ++ G Y+L+SN Y+  G W     VR L RDRG+KK PG S IE  NKV +F  G+  HP
Sbjct: 631 QHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHP 690

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           +  ++Y  L  + AKM+ LGYVPD   VL D+E  +KEHIL +HSERLA+ FG+++ PP 
Sbjct: 691 EAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPG 750

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + + + KNLR+C DCH    F+S+   REI+VRD  RFHHFKDG CSCG+YW
Sbjct: 751 ATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 264/592 (44%), Gaps = 93/592 (15%)

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           S+T LV  YA    L  +   FD +  + R+    N++IS Y R    + AV  F     
Sbjct: 90  SATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 139 TSGLRPDFYTFPPVLKACRNLVD-----GKKIHCSVLKLGFEWDVFVAASL--LHMYCRF 191
           +  LRPD Y+F  +L A  +L +       ++HCSVLK G    + V  +L  L+M C  
Sbjct: 150 SGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCES 209

Query: 192 GLANV-ARKLFDDMPVRDSGS-------------------------------WNAMISGY 219
             A   ARK+ D+MP +D  +                               WNAMISGY
Sbjct: 210 PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGY 269

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-- 277
             SG AVEA ++   M LE V +D  T  S+L  CA       G  +H  I++    F  
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVP 329

Query: 278 --NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA------ 329
              L V+N L+  Y+K G +  A R+FD M  +DVVSWN+I++ Y +S+    A      
Sbjct: 330 EAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 330 -----------------HG--------FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
                            HG         F  M+   ++P   T     +   +L   ++ 
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG 449

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           + +HG I++ G F      GNA++ MYA+ G +  A  +F  +P  D +SWN +I+   Q
Sbjct: 450 KQLHGHIVQLG-FEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQ 508

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           +G   EA+E+F  M     I P++ +++++L A +H G + +G +    + ++   F + 
Sbjct: 509 HGHGREALELFDRM-VAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRD---FGII 564

Query: 485 VA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
                 T L+D+ G+ GRI +A  L   +P   +   W AI+S  G    GD  L     
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS--GCRTSGDMELGAHAA 622

Query: 540 MLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
                + P H  T++ L    S +G   +  R   +M++  G+K   K  GC
Sbjct: 623 DQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDR-GVK---KEPGC 670



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 209/503 (41%), Gaps = 89/503 (17%)

Query: 265 LIHLYIVKHGLEF--NLFVSN-------NLINMYAKFGMMRHALRVFDQM--MERDVVSW 313
           LIHLY +   L     LF ++       +L+  YA    +  A+  FD +    RD V  
Sbjct: 65  LIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLH 124

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLND--CRNSRSVHGF 370
           N++I+AY +++    A   F ++  +G ++PD  +  +L S    L +   R+   +H  
Sbjct: 125 NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCS 184

Query: 371 IMRRG-------------WFM--------------------EDVIIGNAVVDMYAKLGII 397
           +++ G              +M                    +D +    +V  Y + G +
Sbjct: 185 VLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDV 244

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
            +A +VFE +  K  + WN +I+GY  +G+A EA E+F+ M     +  ++ T+ S+L A
Sbjct: 245 GAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRM-VLERVPLDEFTFTSVLSA 303

Query: 458 YSHVGALRQGIKIHARVIKNCLCF----DVFVATCLVDMYGKCGRI-------------- 499
            ++VG    G  +H ++I+    F     + V   LV  Y KCG I              
Sbjct: 304 CANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKD 363

Query: 500 -----------------DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
                            D A+ +F ++P  + + W  ++S +   G  + AL  F +M  
Sbjct: 364 VVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRS 423

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           E V+P   T+   + AC   G +  G Q + H++Q   G +        ++ ++ R G +
Sbjct: 424 ENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQ--LGFEGSNSAGNALITMYARCGAV 481

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSN 659
             AH     MP   D+  W A++ A   HG+        DR+    +  + + +  +++ 
Sbjct: 482 KEAHLMFLVMP-NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540

Query: 660 IYANVGKWEGVDEVRSLARDRGL 682
              +    EG     S+ RD G+
Sbjct: 541 CNHSGLVDEGFRYFESMKRDFGI 563



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 119/258 (46%), Gaps = 12/258 (4%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K V S   +++ Y     L  +   F+ + Y+N  +W  M+S YV  G   +A+  F +
Sbjct: 361 LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNK 420

Query: 136 FTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
              +  ++P  YT+   + AC     L  GK++H  +++LGFE       +L+ MY R G
Sbjct: 421 MR-SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               A  +F  MP  DS SWNAMIS   Q G+  EAL++ D M  EG+  D I+  ++L 
Sbjct: 480 AVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKFGMMRHALRVFDQM-ME 307
            C  S  +  G     Y      +F +    +    LI++  + G +  A  +   M  E
Sbjct: 540 ACNHSGLVDEGF---RYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFE 596

Query: 308 RDVVSWNSIIAAYEQSND 325
                W +I++    S D
Sbjct: 597 PTPSIWEAILSGCRTSGD 614



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 10/172 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H K+LH  +V  G   +  +   L+  YA  G +  +   F  +   +  +WN+MIS 
Sbjct: 446 LKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISA 505

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEW- 176
             + G   EA++ F +  +  G+ PD  +F  VL AC +  LVD    +   +K  F   
Sbjct: 506 LGQHGHGREALELFDRM-VAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGII 564

Query: 177 ---DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGN 224
              D +    L+ +  R G    AR L   MP   + S W A++SG   SG+
Sbjct: 565 PGEDHYT--RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGD 614


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/571 (40%), Positives = 351/571 (61%), Gaps = 2/571 (0%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L   AR+   + G+  H  I++ GL  +   SN L+NMY+K G++  A ++FD+M  R 
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           +VSWN+++ ++ Q+ D   A   F  MQ+ G      T+ S+    A        + +HG
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 172

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           F ++      +V +G A++D+YAK G++  A  VFE +P +  ++W++++ GY QN L  
Sbjct: 173 FALKTA-LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 231

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA+ +F   +    +  NQ T  S L A +   AL +G ++ A   K  +  ++FV + L
Sbjct: 232 EALVLFHRAQAMG-LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSL 290

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           +DMY KCG I++A ++F  V   + V WNAI+S    H +  +A+ +F +M   G+ P+ 
Sbjct: 291 IDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 350

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           IT++S+L+ACSH GLV +G++YF +M     + P++ HY CMVD+ GRAG L  A +FI 
Sbjct: 351 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 410

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEG 669
            MP    AS+WG+LL +CRI+ N+EL  VA+  LFE++  N G +VL+SNIYA   +WE 
Sbjct: 411 RMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEE 470

Query: 670 VDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGY 729
           V   R+L ++   KK  G S IE+ +KV  F  G R HP+  +IY +L +L  +MK +GY
Sbjct: 471 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 530

Query: 730 VPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
                  L DVEE  K+ +L  HSE+LA+ FGI+  P  +PI+I KNLR+CGDCH++ K 
Sbjct: 531 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 590

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S ITEREIIVRD+NRFHHFK+G CSCG++W
Sbjct: 591 ASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 205/368 (55%), Gaps = 4/368 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R  ++G   H  ++++G   D   +  L++MY + GL   ARKLFD+MPVR   SWN M+
Sbjct: 61  RAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMV 120

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
             + Q+G+  +AL +  +M+ EG S    TV+S++  CA    +     +H + +K  L+
Sbjct: 121 GSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALD 180

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N+FV   L+++YAK G+++ A  VF+ M ER  V+W+S++A Y Q+     A   F   
Sbjct: 181 SNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRA 240

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  G++ +  T+ S  S  A        + V     + G    ++ + ++++DMYAK GI
Sbjct: 241 QAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTG-IGSNIFVISSLIDMYAKCGI 299

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I  A  VF  +  K+V+ WN +++G++++  + EA+  F+ M++   I PN  TY+S+L 
Sbjct: 300 IEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG-ICPNDITYISVLS 358

Query: 457 AYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
           A SH+G + +G K    +I+ + +  +V   +C+VD+ G+ G + +A     ++P  ++ 
Sbjct: 359 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 418

Query: 516 P-WNAIIS 522
             W ++++
Sbjct: 419 SMWGSLLA 426



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 182/358 (50%), Gaps = 5/358 (1%)

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           HA ++  G      +S  L+N Y+  G +  +R  FD +  R++ +WN+M+  + + G  
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 129

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAAS 183
            +A+  F Q     G     +T   V+ AC     + + K++H   LK   + +VFV  +
Sbjct: 130 EKALVLFMQMQ-KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 188

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           LL +Y + GL   A  +F+ MP R   +W++M++GY Q+    EAL +    +  G+  +
Sbjct: 189 LLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 248

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T++S L  CA    ++ G  +     K G+  N+FV ++LI+MYAK G++  A  VF 
Sbjct: 249 QFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFS 308

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            + E++VV WN+I++ + +    + A  +F  MQQ GI P+ +T +S+ S  + L     
Sbjct: 309 SVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEK 368

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLIT 420
            R     ++R      +V+  + +VD+  + G+++ A    + +P     S W +L+ 
Sbjct: 369 GRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 6/261 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+LH   + +     VF  T L++ YA  G +  +   F+ +  R+  TW+SM++ YV+ 
Sbjct: 168 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 227

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTF---PPVLKACRNLVDGKKIHCSVLKLGFEWDVFV 180
               EA+  F++     GL  + +T         A   L++GK++     K G   ++FV
Sbjct: 228 ELYEEALVLFHR-AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFV 286

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SL+ MY + G+   A  +F  +  ++   WNA++SG+ +   ++EA+   ++M+  G+
Sbjct: 287 ISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGI 346

Query: 241 SMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             + IT  S+L  C+    +  G     L I  H +  N+   + ++++  + G++  A 
Sbjct: 347 CPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAK 406

Query: 300 RVFDQM-MERDVVSWNSIIAA 319
              D+M  +     W S++A+
Sbjct: 407 DFIDRMPFDATASMWGSLLAS 427


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/633 (38%), Positives = 372/633 (58%), Gaps = 18/633 (2%)

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI--TVASILP 252
           N +  L +D+     G+ N +I   C+ GN  +A+ +L          +P   T   ++ 
Sbjct: 37  NPSANLMNDI----KGNNNQLIQSLCKGGNLKQAIHLL------CCEPNPTQRTFEHLIC 86

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            CA+ +++  GL +H  +V  G + + F++  LINMY + G +  A +VFD+  ER +  
Sbjct: 87  SCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYV 146

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT--LVSLTSIVAQLN--DCRNSRSVH 368
           WN++  A             +  M   GI  D  T   V    +V++L+    +  + +H
Sbjct: 147 WNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIH 206

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             I+R G +  ++ +   ++D+YAK G ++ A +VF  +P K+ +SW+ +I  +A+N + 
Sbjct: 207 AHILRHG-YEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMP 265

Query: 429 SEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
            +A+E+FQ MM E ++  PN  T V++L A + + AL QG  IH  +++  L   + V  
Sbjct: 266 MKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLN 325

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+ MYG+CG I     +F  +     V WN++IS +G+HG G KA+  F  M+ +G  P
Sbjct: 326 ALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSP 385

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
            +I+F+++L ACSH+GLV EG+  F  M  ++ I P ++HY CMVDL GRA  L  A   
Sbjct: 386 SYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 445

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I++M   P  ++WG+LLG+CRIH N+EL   AS  LFE++  N G YVL+++IYA    W
Sbjct: 446 IEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMW 505

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
                V  L   RGL+K PG S IEV  KV  F + +  +P+ E+I+  L  L+ +MK+ 
Sbjct: 506 SEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQ 565

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GYVP  + VL D++E+EKE I+  HSE+LA+AFG+I++     I+I KNLR+C DCH  T
Sbjct: 566 GYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVT 625

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KFIS+   REI+VRD NRFHHFKDG+CSCGDYW
Sbjct: 626 KFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 219/426 (51%), Gaps = 20/426 (4%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           N +I    + G L +A+       L     P   TF  ++ +C    +L DG  +H  ++
Sbjct: 51  NQLIQSLCKGGNLKQAIH-----LLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLV 105

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
             GF+ D F+A  L++MY   G  + ARK+FD+   R    WNA+       G   E LD
Sbjct: 106 SSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLD 165

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILS----GLLIHLYIVKHGLEFNLFVSNNLI 286
           +  +M   G+  D  T   +L  C  S+  +S    G  IH +I++HG E N+ V   L+
Sbjct: 166 LYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLL 225

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPD 344
           ++YAKFG + +A  VF  M  ++ VSW+++IA + ++  P+ A   F  M  +     P+
Sbjct: 226 DVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPN 285

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAV 403
            +T+V++    A L      + +HG+I+RRG  ++ ++ + NA++ MY + G I     V
Sbjct: 286 SVTMVNVLQACAGLAALEQGKLIHGYILRRG--LDSILPVLNALITMYGRCGEILMGQRV 343

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F+ +  +DV+SWN+LI+ Y  +G   +AI++F+ M      +P+  +++++L A SH G 
Sbjct: 344 FDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGS-SPSYISFITVLGACSHAGL 402

Query: 464 LRQG-IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
           + +G I   + + K  +   +    C+VD+ G+  R+D+A+ L   +        W +++
Sbjct: 403 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLL 462

Query: 522 SCHGIH 527
               IH
Sbjct: 463 GSCRIH 468



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 165/324 (50%), Gaps = 13/324 (4%)

Query: 40  CLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C E    +  F+ L  SC + + +     +H  LV SG  +  F +TKL+N Y  LG + 
Sbjct: 71  CCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSID 130

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +R  FD    R +Y WN++       G   E +D + Q     G+  D +T+  VLKAC
Sbjct: 131 RARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWI-GIPSDRFTYTFVLKAC 189

Query: 157 -------RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
                    L  GK+IH  +L+ G+E ++ V  +LL +Y +FG  + A  +F  MP ++ 
Sbjct: 190 VVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNF 249

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIH 267
            SW+AMI+ + ++   ++AL++   M LE     P  +T+ ++L  CA    +  G LIH
Sbjct: 250 VSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIH 309

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            YI++ GL+  L V N LI MY + G +    RVFD M  RDVVSWNS+I+ Y       
Sbjct: 310 GYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGK 369

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSL 351
            A   F  M   G  P  ++ +++
Sbjct: 370 KAIQIFENMIHQGSSPSYISFITV 393


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/684 (36%), Positives = 401/684 (58%), Gaps = 11/684 (1%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S T L+     H L + SG   +++++  +++ YA  G++  +   F   S R+  +WN+
Sbjct: 11  SFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNT 70

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKIHCSVLKL 172
           MI+ +V  G    A++ F +     G   D Y+F  +LK  AC   V+ G+++H  ++K+
Sbjct: 71  MIAGFVNLGNFETALE-FLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           G+E +VF  ++LL MY +      A ++F  + +R+S +WNA+ISGY Q G+   A  +L
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLL 189

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           D M LEGV +D  T A +L +    D       +H  IVKHGL  +  V N +I  Y++ 
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC 249

Query: 293 GMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           G +  A RVFD  +E RD+V+WNS++AAY  +N    A   F  MQ  G +PD+ T  S+
Sbjct: 250 GSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSV 309

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKL--GIINSACAVFEGLP 408
            S   + +     +S+HG +++RG  F+  V I N+++ MY K     ++ A  +FE L 
Sbjct: 310 ISAAFEGSHQGQGKSLHGLVIKRGLEFL--VPISNSLIAMYLKSHSKSMDEALNIFESLE 367

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
            KD +SWN+++TG++Q+GL+ +A++ F+ M     +  +   + ++L + S +  L+ G 
Sbjct: 368 NKDHVSWNSILTGFSQSGLSEDALKFFENMRS-QYVVIDHYAFSAVLRSCSDLATLQLGQ 426

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           ++H  V+K+    + FVA+ L+ MY KCG I+DA   F   P+ SS+ WN++I  +  HG
Sbjct: 427 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 486

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
           +G  AL+ F  M D  V+ DHITFV++LTACSH GLV EG  +   M+ ++GI P ++HY
Sbjct: 487 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 546

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CM+DL GRAG L  A   I+ MP  PDA +W  LLGACR  G++EL +  +  L E++ 
Sbjct: 547 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEP 606

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           E    YVL+S+++ ++ +W     ++ L ++RG+KK PGWS IEV N+V  F   +R+HP
Sbjct: 607 EEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHP 666

Query: 709 KYEKIYDELRNLTAKMKSLGYVPD 732
             E+IY  L  L  +++ L YV +
Sbjct: 667 NCEEIYLRLGELMEEIRRLDYVAN 690


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/683 (36%), Positives = 392/683 (57%), Gaps = 17/683 (2%)

Query: 148 TFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
           +F   +++C++      IH  + + G     ++   L+ M  + G    AR +FD +  +
Sbjct: 46  SFAAAIRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHK 105

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +  SWN +IS Y   G+   AL +  +M +   +M   T A+ L  C+   ++  G  IH
Sbjct: 106 NIFSWNIIISAYAHRGHPSTALHLFAKMDVPPTAM---TFATALSACSSLGDLQRGREIH 162

Query: 268 LYI-VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS-ND 325
             I    G+  ++ +   + +MYAK G +  A  VFD++  ++VVSWN++IAAY QS + 
Sbjct: 163 ARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHS 222

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG--WFMEDVII 383
              A   F  M + G++P   T V    ++   ND  +   +H  I+  G  + + DV +
Sbjct: 223 HHQALDLFEKMAEHGVRPCRATFVG---VLGACNDVTSLEKIHARIVETGLQFDVRDVGV 279

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            NA+++MYAK G +  A  +F  +  +D +S N +I  +AQ GL  E+I+VF+ M+    
Sbjct: 280 QNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMD-LEG 338

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVI-----KNCLCFDVFVATCLVDMYGKCGR 498
           +  +  T+ S++ A S  GAL  G +IH RV+     + C   +V V T LV MYGKCG 
Sbjct: 339 LPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGT 398

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++ A ++F  +   +SV WNA+++     GQGD+A  F R    EGV  D  +F+S+L A
Sbjct: 399 LEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIA 458

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSHSG++     +F +M  +F + P  ++Y CMVDL  R+G LG A   + +MP  PDA 
Sbjct: 459 CSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAI 518

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
            W  LLG CR+ G++E  A A+++ F ++ +N   Y L+S++Y+  GK + + E+RS  +
Sbjct: 519 AWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMK 578

Query: 679 DRGLKK-TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           +RGL+K  PG S IEV+ +V  F  G+ +HP+ +KI  EL  L  ++K  G+VP    V+
Sbjct: 579 ERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVV 638

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            D++ ++KE IL  HSE+LA+AFG+IS+    P+ + KNLRVC DCH   K IS++  R 
Sbjct: 639 HDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRV 698

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           I VRD+NRFH F+ G CSCGDYW
Sbjct: 699 ITVRDANRFHRFQSGTCSCGDYW 721



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 254/537 (47%), Gaps = 30/537 (5%)

Query: 39  DCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           D LE E +   F    +SC   + V  +H  +  +G   + + +  LV   A  G L  +
Sbjct: 36  DSLEREIQSDSFAAAIRSCKDSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEA 95

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
           R  FD I ++N+++WN +IS Y   G  S A+  F +  +     P   TF   L AC +
Sbjct: 96  RSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVP----PTAMTFATALSACSS 151

Query: 159 LVD---GKKIHCSV-LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
           L D   G++IH  +    G    V +  ++  MY + G  + A+ +FD +P ++  SWNA
Sbjct: 152 LGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNA 211

Query: 215 MISGYCQSGNA-VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           +I+ Y QSG++  +ALD+ ++M   GV     T   +L  C   +++ S   IH  IV+ 
Sbjct: 212 LIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGAC---NDVTSLEKIHARIVET 268

Query: 274 GLEFNLF---VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           GL+F++    V N L+NMYAK G +  A  +F +M  RD VS N +IA + Q      + 
Sbjct: 269 GLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESI 328

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR----RGWFMEDVIIGNA 386
             F  M   G+  D  T  S+ +  +        + +H  ++     R   + +V++  A
Sbjct: 329 QVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETA 388

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           +V MY K G +  A AVF+ +  K+ +SWN ++   A  G   EA         C  +  
Sbjct: 389 LVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAF-LRAAACEGVEL 447

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVDMYGKCGRIDDA 502
           +  +++S+L A SH G L         ++ +   FD+  A     C+VD+  + GR+ DA
Sbjct: 448 DSASFISVLIACSHSGMLEVAYDHFQLMLSD---FDLVPAAENYRCMVDLLARSGRLGDA 504

Query: 503 MSLFYQVPRS-SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
             L   +P S  ++ W  ++    + G  + A +   Q  +  + P +    +LL++
Sbjct: 505 DELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFN--LEPQNTAPYTLLSS 559



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 205/439 (46%), Gaps = 37/439 (8%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFD 103
           + F     +C+ L  ++R   +HA +  S  I+ +V   T + + YA  GDLS ++  FD
Sbjct: 140 MTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFD 199

Query: 104 HISYRNVYTWNSMISVYVRCGRL-SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG 162
            I  +NV +WN++I+ Y + G    +A+D F +     G+RP   TF  VL AC ++   
Sbjct: 200 RIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMA-EHGVRPCRATFVGVLGACNDVTSL 258

Query: 163 KKIHCSVLKLGFEWDVF---VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           +KIH  +++ G ++DV    V  +LL+MY + G   VAR +F  M  RD  S N MI+ +
Sbjct: 259 EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATF 318

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-- 277
            Q G   E++ +  EM LEG+  D  T AS++  C+    +  G  IH  +V+  L    
Sbjct: 319 AQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKC 378

Query: 278 ---NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
              N+ V   L++MY K G +  A  VF  M  ++ VSWN+++AA         A  F  
Sbjct: 379 CLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLR 438

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA------VV 388
                G++ D  + +S+      L  C +S  +          + D  +  A      +V
Sbjct: 439 AAACEGVELDSASFISV------LIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMV 492

Query: 389 DMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG----LASEAIEVFQMMEECNE 443
           D+ A+ G +  A  +   +P   D I+W TL+ G    G     AS A + F +  +   
Sbjct: 493 DLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQ--- 549

Query: 444 INPNQGTYVSILPAYSHVG 462
              N   Y  +   YS  G
Sbjct: 550 ---NTAPYTLLSSLYSATG 565


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/743 (34%), Positives = 405/743 (54%), Gaps = 56/743 (7%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           + S   L+  Y+ LG +  +R  FD +  +N+ +WNS+++ Y +  R  EA + F + + 
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
                             RN +               W+  V+      Y   G+ N AR
Sbjct: 158 ------------------RNTIS--------------WNGLVSG-----YINNGMINEAR 180

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++FD MP R+  SW AM+ GY + G   EA  +  +M  + V    + +  +L    R D
Sbjct: 181 EVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE-GRID 239

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
                      +     E ++    N+I  Y + G +  A  +FD+M  R+VVSW ++I 
Sbjct: 240 EACR-------LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y Q+     A   F  M +          VS T+++    +C   R      +     +
Sbjct: 293 GYVQNQQVDIARKLFEVMPEK-------NEVSWTAMLKGYTNC--GRLDEASELFNAMPI 343

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
           + V+  NA++  + + G +  A  VF+ +  KD  +W+ +I  Y + GL  +A+E+F+MM
Sbjct: 344 KSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMM 403

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +    I PN  + +S+L   + +  L  G +IHA+++++    DV+VA+ L+ MY KCG 
Sbjct: 404 QR-EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGN 462

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +  A  +F +      V WN+II+ +  HG G +AL  F  M   G+ PD +TFV +L+A
Sbjct: 463 LAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSA 522

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS++G V +G   F+ M+ ++ ++  ++HY CMVDL GRAG L  A + I+ MP+  DA 
Sbjct: 523 CSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAI 582

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWGALLGACR H  ++L  VA+ +L  ++ +N G ++L+SNIYA+ G+W+ V E+R   R
Sbjct: 583 IWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMR 642

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRT-HPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           DR + K PG S I V  KV  F  G+ + HP++ +I   L  L+  ++  GY PD+SFVL
Sbjct: 643 DRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVL 702

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            DV+E+EK   L  HSE+LA+A+G++  P   PI++ KNLRVCGDCH   K I+++T RE
Sbjct: 703 HDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGRE 762

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RD+NRFHHFKDG CSC DYW
Sbjct: 763 IILRDANRFHHFKDGSCSCRDYW 785



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 239/460 (51%), Gaps = 20/460 (4%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +   S   LV+ Y N G ++ +R  FD +  RNV +W +M+  YV+ G +SEA   F+Q 
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGK-KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                  P+       +     L +G+    C +  +  E DV    +++  YC+ G   
Sbjct: 218 -------PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR LFD+MP R+  SW  MI+GY Q+   V+    L E+  E   +    +      C 
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQN-QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCG 329

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           R D   +  L +   +K     ++   N +I  + + G +  A +VFDQM E+D  +W++
Sbjct: 330 RLDE--ASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSA 382

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  YE+    + A   F  MQ+ GI+P+  +L+S+ S+ A L +  + R +H  ++ R 
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV-RS 441

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
            F  DV + + ++ MY K G +  A  VF+   VKDV+ WN++ITGYAQ+GL  EA+ VF
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCLCFDVFVATCLVDMYG 494
             M   + I P+  T+V +L A S+ G +++G++I ++   K  +   +    C+VD+ G
Sbjct: 502 HDM-HFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLG 560

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
           + G++++AM L  ++P  + ++ W A++     H + D A
Sbjct: 561 RAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 144/271 (53%), Gaps = 10/271 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + +C +L     L   +     IK+V +   ++  +   G++  +R  FD +  ++  TW
Sbjct: 325 YTNCGRLDEASELFNAM----PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVL 170
           ++MI VY R G   +A++ F +     G+RP+F +   VL  C    NL  G++IH  ++
Sbjct: 381 SAMIKVYERKGLELDALELF-RMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV 439

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           +  F+ DV+VA+ LL MY + G    A+++FD   V+D   WN++I+GY Q G  VEAL 
Sbjct: 440 RSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALR 499

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMY 289
           +  +M   G+  D +T   +L  C+ + N+  GL I   +  K+ +E  +     ++++ 
Sbjct: 500 VFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLL 559

Query: 290 AKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            + G +  A+ + ++M ME D + W +++ A
Sbjct: 560 GRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 163/360 (45%), Gaps = 57/360 (15%)

Query: 259 NILSGLLIHLYIVKHGLEFNLFVS-NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           ++ SGL+    ++      N  +S N+LI  Y++ G +  A  VFD+M +++++SWNSI+
Sbjct: 77  SMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIV 136

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y Q+  P  A   F  M +     + ++   L S          +R V   +  R   
Sbjct: 137 AGYFQNKRPQEAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPER--- 189

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             +V+   A+V  Y K G+I+ A  +F  +P K+V+SW  ++ G  Q G   EA  +F M
Sbjct: 190 --NVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI------KNCLCFDVFVA----- 486
           M E + +     T  +++  Y  VG L     + AR++      +N + +   +      
Sbjct: 248 MPEKDVV-----TRTNMIGGYCQVGRL-----VEARMLFDEMPRRNVVSWTTMITGYVQN 297

Query: 487 ---------------------TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
                                T ++  Y  CGR+D+A  LF  +P  S V  NA+I C G
Sbjct: 298 QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFG 357

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            +G+  KA    RQ+ D+    D  T+ +++      GL  +    F MMQ E GI+P+ 
Sbjct: 358 QNGEVPKA----RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQRE-GIRPNF 412


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/748 (34%), Positives = 414/748 (55%), Gaps = 12/748 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++ A +VVSG +  V  +  L+  + NL  +  +   FD +  R+  +WN+MIS+Y    
Sbjct: 166 QVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEE 225

Query: 125 RLSEAVDCFYQFT-LTSG-LRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
             S+   CF   + +  G ++PD  T   ++  C +   +  G  IH   +  G    V 
Sbjct: 226 VYSK---CFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVP 282

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLE 238
           +  +L++MY   G  + A  LF +M  RD  SWN MIS Y QS + VEAL+ L ++ + +
Sbjct: 283 LINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTD 342

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
               + +T +S L  C+  + +++G  IH  I++  L+  L + N+L+ MY+K   M   
Sbjct: 343 EGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDT 402

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            RVF+ M   DVVS N +   Y    D   A   F+ M+  GI+P+ +T+++L      L
Sbjct: 403 ERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSL 462

Query: 359 NDCRN-SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            D  +    +H ++ + G  + D  I N+++ MYA  G + S+  +F  +  K VISWN 
Sbjct: 463 GDLHSYGMPLHAYVTQTG-LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNA 521

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I    ++G   EAI++F   +       ++      L + +++ +L +G+++H   +KN
Sbjct: 522 IIAANVRHGRGEEAIKLFMDSQHAGN-KLDRFCLAECLSSSANLASLEEGMQLHGLSVKN 580

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            L  D  V    +DMYGKCG++D  +          +  WN +IS +  +G   +A + F
Sbjct: 581 GLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTF 640

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
           + M+  G +PD++TFV+LL+ACSH+GL+ +G  Y++ M   FG+ P +KH  C+VDL GR
Sbjct: 641 KHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGR 700

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
            G    A  FI  MPV P+  IW +LL + R H N+++G  A+  L E+D  +   YVL+
Sbjct: 701 LGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLL 760

Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
           SN+YA   +W  VD++RS  +   L K P  S +++ N+V  F  G+R+H   EKIY +L
Sbjct: 761 SNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKL 820

Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
             +  K++ +GYV D S  L D +E++KEH L +HSE+LA+A+G++  P  S I+IFKNL
Sbjct: 821 DEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNL 880

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNR 805
           RVC DCH   K +S +  REI++RD  R
Sbjct: 881 RVCADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 267/564 (47%), Gaps = 10/564 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL   +G +  V+  T L++ Y + G +  ++  F  +  RNV +W +++      G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 182
           + EA+   Y+     G+  +      V+  C  L D   G ++   V+  G    V VA 
Sbjct: 126 MEEAL-VAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVAN 184

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+ M+        A +LFD M  RD  SWNAMIS Y       +   +L +MR   V  
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKP 244

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T+ S++ VCA SD +  G  IH   V  GL  ++ + N L+NMY+  G +  A  +F
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLF 304

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITA-HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
             M  RDV+SWN++I++Y QSN  + A       +Q     P+ +T  S     +     
Sbjct: 305 RNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEAL 364

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            N R++H  I++R      ++IGN+++ MY+K   +     VFE +P  DV+S N L  G
Sbjct: 365 MNGRTIHAMILQRS-LQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ-GIKIHARVIKNCLC 480
           YA     + A+ VF  M     I PN  T +++      +G L   G+ +HA V +  L 
Sbjct: 424 YAALEDVANAMRVFSWMRGTG-IKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D ++   L+ MY  CG ++ +  +F ++   S + WNAII+ +  HG+G++A+  F   
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              G + D       L++ ++   + EG +  H +  + G+          +D++G+ G 
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQ-LHGLSVKNGLDCDSHVVNATMDMYGKCGK 601

Query: 601 LGMAHNFIQNMPVRPDASIWGALL 624
           +      + +   RP    W  L+
Sbjct: 602 MDCMLKTLPDPAHRP-TQCWNTLI 624



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 270/561 (48%), Gaps = 28/561 (4%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACRN- 158
           + +R   +W + +S   RCG  S A      FTL   +R        +    ++ AC + 
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTA------FTLLRVMRERDVPLSGFALASLVTACEHR 54

Query: 159 -----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
                   G  IH    + G   +V++  +LLH+Y   GL   A++LF +MP R+  SW 
Sbjct: 55  GWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWT 114

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           A++     +G   EAL     MR EGV  +   +A+++ +C   ++ ++GL +  ++V  
Sbjct: 115 AIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVS 174

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF- 332
           GL  ++ V+N+LI M+     ++ A R+FD+M ERD +SWN++I+ Y  S++ + +  F 
Sbjct: 175 GLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMY--SHEEVYSKCFI 232

Query: 333 -FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
             + M+   ++PD+ TL SL S+ A  +       +H   +  G      +I NA+V+MY
Sbjct: 233 VLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI-NALVNMY 291

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           +  G ++ A ++F  +  +DVISWNT+I+ Y Q+    EA+E    + + +E  PN  T+
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S L A S   AL  G  IHA +++  L   + +   L+ MY KC  ++D   +F  +P 
Sbjct: 352 SSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPC 411

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V  N +   +        A+  F  M   G++P++IT ++L   C   G +      
Sbjct: 412 YDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMP 471

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            H    + G+         ++ ++   G L  +      +  +   S W A++ A   HG
Sbjct: 472 LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHG 530

Query: 632 NMELGAVASDRLFEVDSENVG 652
             E     + +LF +DS++ G
Sbjct: 531 RGE----EAIKLF-MDSQHAG 546


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/608 (38%), Positives = 374/608 (61%), Gaps = 17/608 (2%)

Query: 220 CQSGNAVEAL---DILD-EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           C SG   EAL    IL  E++ EG         SIL  C     I  G  +H +++K   
Sbjct: 41  CSSGQLKEALLQMAILGREVKFEGYD-------SILNECVSQRAIREGQRVHTHMIKTCY 93

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             ++++   LI +Y K   +  A  +FD+M +R+VVSW ++I+AY Q      A   F  
Sbjct: 94  LPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVE 153

Query: 336 MQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           M ++  +P+  T  + LTS    L      R +H   ++R  +   + +G++++DMYAK 
Sbjct: 154 MLRSDTEPNHFTFATILTSCYGSLG-FETGRQIHSIAIKRN-YESHMFVGSSLLDMYAKS 211

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  A  VF  LP +DV++   +I+GYAQ GL  EA+++F+ ++    +N N  TY S+
Sbjct: 212 GRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQ-IEGMNSNSVTYASV 270

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S + AL  G ++H+ V+++     V +   L+DMY KCG +  A  +F  +P  + 
Sbjct: 271 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 330

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEG-QRYF 572
           + WNA++  +  HG   + L  F+ M +E  V+PD IT++++L+ CSH  L   G + ++
Sbjct: 331 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFY 390

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           +M+  + GI+P + HYGC+VDL GRAG +  A +FI+ MP  P A+IWG+LLG+CR+H +
Sbjct: 391 NMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSD 450

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           +E+G +   +L E++ EN G YV++SN+YA+ GKWE +  +R L +++ + K PG S +E
Sbjct: 451 VEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVE 510

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
           ++  V  F+  + THP+ E++ ++++ L+ K K  GYVPD S VL DV+E++KE +L  H
Sbjct: 511 LDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGH 570

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SE+LA+AFG+I++P  + I++ KNLR+C DCH++ KF+S++  R +I+RD NRFH+   G
Sbjct: 571 SEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGG 630

Query: 813 ICSCGDYW 820
           +CSCGDYW
Sbjct: 631 VCSCGDYW 638



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 258/489 (52%), Gaps = 19/489 (3%)

Query: 98  SRHTFD-HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
           SR+TF   IS+       ++ S     G+L EA+    Q  +  G    F  +  +L  C
Sbjct: 21  SRYTFSRQISFSPSPNLKTLCS----SGQLKEAL---LQMAIL-GREVKFEGYDSILNEC 72

Query: 157 ---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
              R + +G+++H  ++K  +   V++   L+ +Y +      AR +FD+MP R+  SW 
Sbjct: 73  VSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWT 132

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           AMIS Y Q G A EAL++  EM       +  T A+IL  C  S    +G  IH   +K 
Sbjct: 133 AMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKR 192

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
             E ++FV ++L++MYAK G +  A  VF  + ERDVV+  +II+ Y Q      A   F
Sbjct: 193 NYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLF 252

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             +Q  G+  + +T  S+ + ++ L    + + VH  ++R G +   V++ N+++DMY+K
Sbjct: 253 RQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY-SYVVLLNSLIDMYSK 311

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G +  A  +F+ +P +  ISWN ++ GY+++G+A E +E+F++M E N++ P+  TY++
Sbjct: 312 CGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLA 371

Query: 454 ILPAYSHVGALRQGIKIHARVI--KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP- 510
           +L   SH      G++I   ++  K+ +  D+    C+VD+ G+ GR+++A     ++P 
Sbjct: 372 VLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPF 431

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQ 569
             ++  W +++    +H   +  +   +++L+  + P++   +V L    + +G   + +
Sbjct: 432 VPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILSNLYASAGKWEDMR 489

Query: 570 RYFHMMQEE 578
               +MQE+
Sbjct: 490 NIRDLMQEK 498



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 211/431 (48%), Gaps = 19/431 (4%)

Query: 46  REIDF---DDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR 99
           RE+ F   D +   C     ++   R+H  ++ +  + +V+  T+L+  Y     L  +R
Sbjct: 58  REVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAR 117

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
             FD +  RNV +W +MIS Y + G   EA++ F +  L S   P+ +TF  +L +C   
Sbjct: 118 GMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEM-LRSDTEPNHFTFATILTSCYGS 176

Query: 160 V---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           +    G++IH   +K  +E  +FV +SLL MY + G    A  +F  +P RD  +  A+I
Sbjct: 177 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 236

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           SGY Q G   EAL +  ++++EG++ + +T AS+L   +    +  G  +H ++++ G  
Sbjct: 237 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 296

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + + N+LI+MY+K G + +A R+FD M ER  +SWN+++  Y +          F  M
Sbjct: 297 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLM 356

Query: 337 QQAG-IQPDLLTLVSLTSIVA--QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           ++   ++PD +T +++ S  +  QL D       +  +  +     D+     VVD+  +
Sbjct: 357 REENKVKPDSITYLAVLSGCSHGQLED-MGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGR 415

Query: 394 LGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTY 451
            G +  A    + +P V     W +L+     +      I V Q +    E+ P N G Y
Sbjct: 416 AGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL---ELEPENAGNY 472

Query: 452 VSILPAYSHVG 462
           V +   Y+  G
Sbjct: 473 VILSNLYASAG 483


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 239/590 (40%), Positives = 357/590 (60%), Gaps = 38/590 (6%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           IH   +  G+  + FV++ +++  A    G + +A  +F ++ + D+   N++I AY  S
Sbjct: 54  IHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFS 113

Query: 324 NDPITAHGFFTTMQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
            +PI A  F++ M ++ +  PD+ T   L    +++   R   ++H  + + GW  E V 
Sbjct: 114 PNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSE-VS 172

Query: 383 IGNAVVDMYAKLGIINSA------------------------CAVF-------EGLPVKD 411
           + N +V MYA  G+I SA                        C VF       E +P +D
Sbjct: 173 VSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRD 232

Query: 412 VISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           V+SW+ +I GY Q     E + +FQ MM E  +I PN+   V+ L A +H+GA+ QG  I
Sbjct: 233 VVSWSVMINGYVQESRFKEGLGLFQDMMGE--KIEPNESVLVNALSACAHLGAMEQGQWI 290

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              + +  +   V + T L+DMY KCG ++ A+ +F+++   + + W+A+I+   I+GQG
Sbjct: 291 ERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQG 350

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
             ALN F QM  +GV+P+ +TF+ +L ACSHS LV EG  +FH M   +G+KP+  H+ C
Sbjct: 351 KDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCC 410

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVDL+GRAG L  A   I++MP +P+++IWGALL ACRIHG+ ELG     RL E+D  +
Sbjct: 411 MVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNH 470

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
            G YVL+SNIYA  G+W+ V E+R + R+R + KTPG S I++ + +  F  G+ +HP+ 
Sbjct: 471 GGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQL 530

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           E IY +L  ++ ++K+ GY PD   VL D++E+EKE  L  HSE+LAIAFG+I + P + 
Sbjct: 531 EMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGTT 590

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I+I KNLRVC DCH+ TK IS+I  REIIVRD  RFHHF+DG CSC D+W
Sbjct: 591 IRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 212/465 (45%), Gaps = 47/465 (10%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLFDDMPVRDSG 210
           L +C+ L D  +IH   +  G   D FVA+ +L        G    AR LF  +   D  
Sbjct: 42  LSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIF 101

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI-TVASILPVCARSDNILSGLLIHLY 269
             N +I  Y  S N ++A+    EM    V    + T   +L  C+   ++  G  IH +
Sbjct: 102 IANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSH 161

Query: 270 IVKHGLEFNLFVSNNLINMYA-------------------------------KFGMMRHA 298
           + K G    + VSN L+ MYA                               K G+ + A
Sbjct: 162 VFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSA 221

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            R+F+ M +RDVVSW+ +I  Y Q +      G F  M    I+P+   LV+  S  A L
Sbjct: 222 RRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHL 281

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + +  ++ R+   +  V +G A++DMY+K G +  A  VF  +  K+V++W+ +
Sbjct: 282 GAMEQGQWIERYMERKNVRL-TVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAM 340

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKN 477
           I G A NG   +A+ +F  M E   + PN+ T++ IL A SH   + +G    H+     
Sbjct: 341 INGLAINGQGKDALNLFSQM-EMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIY 399

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNF 536
            L  +     C+VD+YG+ G +D A ++   +P + +S  W A+++   IHG  +     
Sbjct: 400 GLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQV 459

Query: 537 FRQMLDEGVRPDH----ITFVSLLTACSHSGLVSEGQRYFHMMQE 577
            +++L+  + P+H    +   ++  AC     V+E +R   MM+E
Sbjct: 460 GKRLLE--LDPNHGGRYVLLSNIYAACGRWDRVAELRR---MMRE 499



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 207/454 (45%), Gaps = 55/454 (12%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVY 111
             SC  L  + ++HA  + +G     F ++++++F A    G + ++R  F  I   +++
Sbjct: 42  LSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIF 101

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
             N++I  Y       +AV  + + T +S + PD +TFP +LKAC  +     G+ IH  
Sbjct: 102 IANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSH 161

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLA-------------------------------NVA 197
           V KLG+  +V V+  L+ MY   GL                                  A
Sbjct: 162 VFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSA 221

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R++F+ MP RD  SW+ MI+GY Q     E L +  +M  E +  +   + + L  CA  
Sbjct: 222 RRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHL 281

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  I  Y+ +  +   + +   LI+MY+K G +  AL VF +M E++V++W+++I
Sbjct: 282 GAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMI 341

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-------HGF 370
                +     A   F+ M+  G++P+ +T + +      LN C +S+ V       H  
Sbjct: 342 NGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGI------LNACSHSKLVDEGCSFFHSM 395

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLAS 429
               G    +      +VD+Y + G+++ A  V + +P K +   W  L+     +G  +
Sbjct: 396 TSIYG-LKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG-DT 453

Query: 430 EAIEVFQMMEECNEINPNQ-GTYVSILPAYSHVG 462
           E  E  Q+ +   E++PN  G YV +   Y+  G
Sbjct: 454 ELGE--QVGKRLLELDPNHGGRYVLLSNIYAACG 485



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 41/316 (12%)

Query: 354 IVAQLNDCRNSR---SVHGFIMRRGWFMEDVIIGNAVVDMYAKL---GIINSACAVFEGL 407
           I+  L+ C+  +    +H   +  G F ++ +    +   +A L   G I  A  +F  +
Sbjct: 38  ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILS--FAALSPHGSIPYARFLFYRI 95

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
              D+   NTLI  YA +    +A+  +  M E + + P+  T+  +L A S + +LR G
Sbjct: 96  RKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLG 155

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH--- 524
             IH+ V K     +V V+  LV MY  CG I+ A  +F + P      WN +I  +   
Sbjct: 156 EAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKC 215

Query: 525 GIHGQGDK----------------------------ALNFFRQMLDEGVRPDHITFVSLL 556
           G+     +                             L  F+ M+ E + P+    V+ L
Sbjct: 216 GVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNAL 275

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +AC+H G + +GQ +     E   ++  ++    ++D++ + G +  A      M  + +
Sbjct: 276 SACAHLGAMEQGQ-WIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEK-N 333

Query: 617 ASIWGALLGACRIHGN 632
              W A++    I+G 
Sbjct: 334 VLAWSAMINGLAINGQ 349



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 16/194 (8%)

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           TV   T L++ Y+  G +  +   F  +  +NV  W++MI+     G+  +A++ F Q  
Sbjct: 302 TVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQME 361

Query: 138 LTSGLRPDFYTFPPVLKACRN--LVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
           +  G++P+  TF  +L AC +  LVD      H      G + +      ++ +Y R G+
Sbjct: 362 M-QGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGM 420

Query: 194 ANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP------IT 246
            + A+ +   MP + +S  W A+++  C+     E  + + +  LE   +DP      + 
Sbjct: 421 LDQAQTVIKSMPFKPNSAIWGALLNA-CRIHGDTELGEQVGKRLLE---LDPNHGGRYVL 476

Query: 247 VASILPVCARSDNI 260
           +++I   C R D +
Sbjct: 477 LSNIYAACGRWDRV 490


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/574 (38%), Positives = 353/574 (61%), Gaps = 2/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V  IL +CA+   +L G   H  I+  GL+ +L  SN LINMY+K G +  A +VFD+M 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            R +VSWN++I +  Q+ +   A      MQ+ G      T+ S+    A        + 
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H F ++    + +V +  A++D+YAK G++  A  VFE +P + V++W+++  GY QN 
Sbjct: 187 LHAFAIKAAMDL-NVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           +  +A+ +F+   E   +  +Q    S++ A + + A+ +G +++A + K+  C ++FVA
Sbjct: 246 MYEQALALFRKAWETG-LKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVA 304

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + L+DMY KCG I+++  +F  V + + V WNA+IS    H +  + +  F +M   G+ 
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +TFVS+L+AC H GLV +GQ+YF +M +E  + P++ HY CMVD   RAG +  A++
Sbjct: 365 PNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYD 424

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I  +P    AS+WG+LL +CR HGN+EL  VA+ +LF+++  N G Y+L+SN+YA  GK
Sbjct: 425 LISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGK 484

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V ++R L ++  +KK  G S IE+ +KV +F  G R HPK  +IY +L  +  +++ 
Sbjct: 485 WDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQK 544

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
           LGY  +    L  V E  K+ +L  HSE+LA   G++  PP +PI+I KNLR+CGDCH++
Sbjct: 545 LGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSF 604

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            K  S+   R++IVRD+NRFHHFK+G CSCGD+W
Sbjct: 605 MKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 223/396 (56%), Gaps = 7/396 (1%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +LK C   + L+ GK  H  +L +G + D+  +  L++MY + G  + AR++FD+MP R 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN MI    Q+G   EALD+L +M+ EG      T++S+L  CA    +    L+H 
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           + +K  ++ N+FV+  L+++YAK G+M+ A+ VF+ M +R VV+W+S+ A Y Q+     
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F    + G++ D   + S+    A L      + ++  + + G F  ++ + ++++
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSG-FCSNIFVASSLI 308

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G I  +  VF  +  ++V+ WN +I+G +++  + E + +F+ M++   ++PN 
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG-LSPND 367

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
            T+VS+L A  H+G +R+G K    + K + L  +VF  +C+VD   + G+I +A  L  
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427

Query: 508 QVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLD 542
           ++P ++S   W ++++    HG  + A    +++ D
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFD 463



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 223/467 (47%), Gaps = 17/467 (3%)

Query: 9   KDRRLCKLLPLLQAHRPLFSAAANSLQI----SPDCLENESREIDF-DDLFQSCTK---L 60
           K +R+ + L L       F++ ++S  I     P   +  +  + F  ++ + C K   L
Sbjct: 21  KGKRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHVSFVHEILKLCAKRKLL 80

Query: 61  HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
              K  HA +++ G    + +S  L+N Y+  G + F+R  FD +  R++ +WN+MI   
Sbjct: 81  LQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSL 140

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWD 177
            + G  +EA+D   Q     G     +T   VL AC     L + + +H   +K   + +
Sbjct: 141 TQNGEENEALDLLLQMQ-REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLN 199

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
           VFVA +LL +Y + GL   A  +F+ MP R   +W++M +GY Q+    +AL +  +   
Sbjct: 200 VFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWE 259

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            G+  D   ++S++  CA    ++ G  ++  + K G   N+FV+++LI+MYAK G +  
Sbjct: 260 TGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEE 319

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           + +VF  + +R+VV WN++I+   +    +     F  MQQ G+ P+ +T VS+ S    
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WN 416
           +   R  +     + +      +V   + +VD  ++ G I  A  +   LP     S W 
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           +L+     +G   E  EV    ++  +I P N G Y+ +   Y+  G
Sbjct: 440 SLLASCRTHG-NLELAEV--AAKKLFDIEPHNSGNYLLLSNMYAANG 483


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/571 (40%), Positives = 351/571 (61%), Gaps = 2/571 (0%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L   AR+   + G+  H  I++ GL  +   SN L+NMY+K G++  A ++FD+M  R 
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           +VSWN+++ ++ Q+ D   A   F  MQ+ G      T+ S+    A        + +HG
Sbjct: 86  LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 145

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
           F ++      +V +G A++D+YAK G++  A  VFE +P +  ++W++++ GY QN L  
Sbjct: 146 FALKTA-LDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE 204

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA+ +F   +    +  NQ T  S L A +   AL +G ++ A   K  +  ++FV + L
Sbjct: 205 EALVLFHRAQAMG-LEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSL 263

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           +DMY KCG I++A ++F  V   + V WNAI+S    H +  +A+ +F +M   G+ P+ 
Sbjct: 264 IDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 323

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           IT++S+L+ACSH GLV +G++YF +M     + P++ HY CMVD+ GRAG L  A +FI 
Sbjct: 324 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 383

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEG 669
            MP    AS+WG+LL +CRI+ N+EL  VA+  LFE++  N G +VL+SNIYA   +WE 
Sbjct: 384 RMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEE 443

Query: 670 VDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGY 729
           V   R+L ++   KK  G S IE+ +KV  F  G R HP+  +IY +L +L  +MK +GY
Sbjct: 444 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 503

Query: 730 VPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
                  L DVEE  K+ +L  HSE+LA+ FGI+  P  +PI+I KNLR+CGDCH++ K 
Sbjct: 504 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 563

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S ITEREIIVRD+NRFHHFK+G CSCG++W
Sbjct: 564 ASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 205/368 (55%), Gaps = 4/368 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R  ++G   H  ++++G   D   +  L++MY + GL   ARKLFD+MPVR   SWN M+
Sbjct: 34  RAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMV 93

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
             + Q+G+  +AL +  +M+ EG S    TV+S++  CA    +     +H + +K  L+
Sbjct: 94  GSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALD 153

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N+FV   L+++YAK G+++ A  VF+ M ER  V+W+S++A Y Q+     A   F   
Sbjct: 154 SNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRA 213

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  G++ +  T+ S  S  A        + V     + G    ++ + ++++DMYAK GI
Sbjct: 214 QAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTG-IGSNIFVISSLIDMYAKCGI 272

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I  A  VF  +  K+V+ WN +++G++++  + EA+  F+ M++   I PN  TY+S+L 
Sbjct: 273 IEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMG-ICPNDITYISVLS 331

Query: 457 AYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
           A SH+G + +G K    +I+ + +  +V   +C+VD+ G+ G + +A     ++P  ++ 
Sbjct: 332 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 391

Query: 516 P-WNAIIS 522
             W ++++
Sbjct: 392 SMWGSLLA 399



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 182/358 (50%), Gaps = 5/358 (1%)

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           HA ++  G      +S  L+N Y+  G +  +R  FD +  R++ +WN+M+  + + G  
Sbjct: 43  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDC 102

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAAS 183
            +A+  F Q     G     +T   V+ AC     + + K++H   LK   + +VFV  +
Sbjct: 103 EKALVLFMQMQ-KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 161

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           LL +Y + GL   A  +F+ MP R   +W++M++GY Q+    EAL +    +  G+  +
Sbjct: 162 LLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 221

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T++S L  CA    ++ G  +     K G+  N+FV ++LI+MYAK G++  A  VF 
Sbjct: 222 QFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFS 281

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            + E++VV WN+I++ + +    + A  +F  MQQ GI P+ +T +S+ S  + L     
Sbjct: 282 SVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEK 341

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLIT 420
            R     ++R      +V+  + +VD+  + G+++ A    + +P     S W +L+ 
Sbjct: 342 GRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 6/261 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+LH   + +     VF  T L++ YA  G +  +   F+ +  R+  TW+SM++ YV+ 
Sbjct: 141 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQN 200

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTF---PPVLKACRNLVDGKKIHCSVLKLGFEWDVFV 180
               EA+  F++     GL  + +T         A   L++GK++     K G   ++FV
Sbjct: 201 ELYEEALVLFHR-AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFV 259

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SL+ MY + G+   A  +F  +  ++   WNA++SG+ +   ++EA+   ++M+  G+
Sbjct: 260 ISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGI 319

Query: 241 SMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             + IT  S+L  C+    +  G     L I  H +  N+   + ++++  + G++  A 
Sbjct: 320 CPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAK 379

Query: 300 RVFDQM-MERDVVSWNSIIAA 319
              D+M  +     W S++A+
Sbjct: 380 DFIDRMPFDATASMWGSLLAS 400


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/770 (34%), Positives = 407/770 (52%), Gaps = 97/770 (12%)

Query: 138 LTSGLRPDFYTFPPVLKACRNLVDG--KKIHCSVLKLGFEW----DVFVAASLLHMYCRF 191
           LTSG +P    FP ++     L+D   K  +    +  F+     D+  A ++L  Y   
Sbjct: 23  LTSGFKP----FPLIIN---RLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAA 75

Query: 192 GLANVARKLFDDMP--VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           G   +A +LF+  P  +RD+ S+NAMI+ +  S +   AL +  +M+  G   DP T +S
Sbjct: 76  GNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSS 135

Query: 250 ILPVCAR-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG---------MMRHAL 299
           +L   +  +D       +H  + K G      V N L++ Y             +M  A 
Sbjct: 136 VLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAAR 195

Query: 300 RVFDQMM--ERDVVSWNSIIAAYEQSNDPITAH------------------------GFF 333
           ++FD+     RD  +W +IIA Y +++D + A                         GF+
Sbjct: 196 KLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFY 255

Query: 334 TT-------MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-----RGWFMEDV 381
                    M   GIQ D  T  S+ S  +        R VH +++R      G F+  +
Sbjct: 256 EEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV--L 313

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT------------------------ 417
            + NA++ +Y + G +  A  VF+ +PVKD++SWN                         
Sbjct: 314 SVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVR 373

Query: 418 -------LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
                  +I+G AQNG   E +++F  M+    + P    Y   + + S +G+L  G ++
Sbjct: 374 SLLTWTVMISGLAQNGFGEEGLKLFNQMK-LEGLEPCDYAYAGAIASCSVLGSLDNGQQL 432

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H+++I+      + V   L+ MY +CG ++ A ++F  +P   SV WNA+I+    HG G
Sbjct: 433 HSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHG 492

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            +A+  + +ML E + PD ITF+++L+ACSH+GLV EG+ YF  M+  +GI P   HY  
Sbjct: 493 VQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSR 552

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           ++DL  RAG    A N  ++MP  P A IW ALL  C IHGNMELG  A+DRL E+  + 
Sbjct: 553 LIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQ 612

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
            G Y+ +SN+YA +G+W+ V  VR L R+RG+KK PG S IEV N V +F   +  HP+ 
Sbjct: 613 DGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEV 672

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
             +Y  L  L  +M+ LGYVPD  FVL D+E ++KE+ L++HSE+LA+ +GI+  P  + 
Sbjct: 673 HAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGAT 732

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I++FKNLR+CGDCHN  K+IS++ +REIIVRD  RFHHF++G CSC +YW
Sbjct: 733 IRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 279/604 (46%), Gaps = 107/604 (17%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + ++T +++ Y+  G++  +   F+   +S R+  ++N+MI+ +        A+  F Q 
Sbjct: 62  IVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQM 121

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVFVAASLLH--MYCR 190
               G  PD +TF  VL A   + D     +++HC V    F+W      S+L+  M C 
Sbjct: 122 KRL-GFVPDPFTFSSVLGALSLIADEETHCQQLHCEV----FKWGALSVPSVLNALMSCY 176

Query: 191 FGLAN-----------VARKLFDDMP----------------VRDSG------------- 210
              A+            ARKLFD+ P                VR+               
Sbjct: 177 VSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTD 236

Query: 211 ----SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
               +WNAMISGY   G   EA D+L  M   G+ +D  T  S++   + +     G  +
Sbjct: 237 HIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQV 296

Query: 267 HLYIVKHGLE----FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA--- 319
           H Y+++  ++    F L V+N LI +Y + G +  A RVFD+M  +D+VSWN+I++    
Sbjct: 297 HAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVN 356

Query: 320 ---YEQSND-----PITA-------------HGF-------FTTMQQAGIQPDLLTLVSL 351
               E++N      P+ +             +GF       F  M+  G++P        
Sbjct: 357 ARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGA 416

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            +  + L    N + +H  I++ G     + +GNA++ MY++ G++ +A  VF  +P  D
Sbjct: 417 IASCSVLGSLDNGQQLHSQIIQLG-HDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVD 475

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWN +I   AQ+G   +AI++++ M +  +I P++ T+++IL A SH G +++G + +
Sbjct: 476 SVSWNAMIAALAQHGHGVQAIQLYEKMLK-EDILPDRITFLTILSACSHAGLVKEG-RHY 533

Query: 472 ARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGI 526
              ++  +C+ +       + L+D+  + G   +A ++   +P     P W A+++   I
Sbjct: 534 FDTMR--VCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWI 591

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG  +  +    ++L+   + D  T++SL    +  G   E  R   +M+E  G+K   K
Sbjct: 592 HGNMELGIQAADRLLELMPQQDG-TYISLSNMYAALGQWDEVARVRKLMRER-GVK---K 646

Query: 587 HYGC 590
             GC
Sbjct: 647 EPGC 650



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 10/272 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L+  C KL   +R+   +     +K + S   +++   N   +  +   F  +  R++ T
Sbjct: 322 LYTRCGKLVEARRVFDKM----PVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLT 377

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           W  MIS   + G   E +  F Q  L  GL P  Y +   + +C    +L +G+++H  +
Sbjct: 378 WTVMISGLAQNGFGEEGLKLFNQMKL-EGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQI 436

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           ++LG +  + V  +L+ MY R GL   A  +F  MP  DS SWNAMI+   Q G+ V+A+
Sbjct: 437 IQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAI 496

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINM 288
            + ++M  E +  D IT  +IL  C+ +  +  G        V +G+       + LI++
Sbjct: 497 QLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDL 556

Query: 289 YAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             + GM   A  V + M  E     W +++A 
Sbjct: 557 LCRAGMFSEAKNVTESMPFEPGAPIWEALLAG 588



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 137/354 (38%), Gaps = 86/354 (24%)

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP------ 408
           +AQL+    +R+VH  I+  G F    +I N ++D Y K   I  A  +F+ +P      
Sbjct: 6   LAQLSHTSFARAVHAHILTSG-FKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVA 64

Query: 409 ---------------------------VKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
                                      ++D +S+N +IT ++ +     A+++F  M+  
Sbjct: 65  ATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRL 124

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGI-KIHARVIK----------NCLCFDVFVATCLV 490
             + P+  T+ S+L A S +        ++H  V K          N L    +V+    
Sbjct: 125 GFV-PDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNAL-MSCYVSCASS 182

Query: 491 DMYGKCGRIDDAMSLFYQVPRSS---------------------------------SVPW 517
            +   C  +  A  LF + P                                    +V W
Sbjct: 183 PLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAW 242

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           NA+IS +   G  ++A +  R+M   G++ D  T+ S+++A S++GL + G R  H    
Sbjct: 243 NAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIG-RQVHAYVL 301

Query: 578 EFGIKPH----LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
              ++P     L     ++ L+ R G L  A      MPV+ D   W A+L  C
Sbjct: 302 RTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGC 354


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/574 (41%), Positives = 348/574 (60%), Gaps = 3/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +  +L   ARS +I+ GL +H YIVK GL     V+NNLIN Y+K  +   + R F+   
Sbjct: 18  ICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ++   +W+SII+ + Q+  P  +  F   M    ++PD   L S T     L+ C   +S
Sbjct: 78  QKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKS 137

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH   M+ G +  DV +G+++VDMYAK G I  A  +F+ +P+++V++W+ ++ GYAQ G
Sbjct: 138 VHCLSMKTG-YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMG 196

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              EA+ +F+     N +  N  ++ +++   ++   L  G +I    IK+      FV 
Sbjct: 197 ENEEALWLFKEALFEN-LAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVG 255

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + LV +Y KCG ++ A  +F +VP  +   WNA++     H    K +  F++M   G++
Sbjct: 256 SSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMK 315

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ ITF+++L ACSH+GLV EG+ YF +M+E   I+P  KHY  +VD+ GRAG L  A  
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGKYYFDLMKES-RIEPTDKHYASLVDMLGRAGKLEEALE 374

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            + NMP+ P  S+WGALL +C IH N EL A A+D++FE+   + G ++ +SN YA  G+
Sbjct: 375 IVTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           +E   + R L RDRG KK  G S +E  NKV  F  G R H + ++IY++L  L  +M+ 
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEK 494

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GYV D S+VL++V+ DEK   +  HSERLAIAFG+I+ P   PI++ KNLRVCGDCHN 
Sbjct: 495 AGYVADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNA 554

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KF+S  T R IIVRD+NRFH F+DG CSC DYW
Sbjct: 555 IKFMSICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 211/425 (49%), Gaps = 40/425 (9%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF-SRHTFDHISYRNVYTWNSMISVYVRC 123
           +LH  +V SG       +  L+NFY+    L F SR  F+    ++  TW+S+IS + + 
Sbjct: 36  QLHGYIVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKSATTWSSIISCFAQ- 93

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
             L      F +  +   LRPD +  P   K+C  L     GK +HC  +K G++ DVFV
Sbjct: 94  NELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFV 153

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SL+ MY + G    ARK+FD+MP+R+  +W+ M+ GY Q G   EAL +  E   E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           +++  + ++++ VCA S  +  G  I    +K   + + FV ++L+++Y+K G +  A +
Sbjct: 214 AVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQ 273

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD++  R++  WN+++ A  Q +        F  M+ +G++P+ +T +++      LN 
Sbjct: 274 VFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNV------LNA 327

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGN----------AVVDMYAKLGIINSACAVFEGLPVK 410
           C      H  ++  G +  D++  +          ++VDM  + G +  A  +   +P+ 
Sbjct: 328 CS-----HAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPID 382

Query: 411 DVIS-WNTLITG---YAQNGLAS-EAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGAL 464
              S W  L+T    +    LA+  A +VF       E+ P + G ++S+  AY+  G  
Sbjct: 383 PTESVWGALLTSCTIHKNTELAAFAADKVF-------ELGPVSSGMHISLSNAYAADGRF 435

Query: 465 RQGIK 469
               K
Sbjct: 436 EDAAK 440



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 202/384 (52%), Gaps = 15/384 (3%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R++V G ++H  ++K G      VA +L++ Y +  L   +R+ F+D P + + +W+++I
Sbjct: 29  RSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSII 88

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS----GLLIHLYIVK 272
           S + Q+     +L+ L +M    +  D      +LP   +S  ILS    G  +H   +K
Sbjct: 89  SCFAQNELPWMSLEFLRKMMAGSLRPDD----HVLPSATKSCGILSRCDIGKSVHCLSMK 144

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G + ++FV ++L++MYAK G + +A ++FD+M  R+VV+W+ ++  Y Q  +   A   
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWL 204

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F       +  +  +  ++ S+ A        R + G  ++   F     +G+++V +Y+
Sbjct: 205 FKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSS-FDSSSFVGSSLVSLYS 263

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G +  A  VF+ +P++++  WN ++   AQ+    + IE+F+ M + + + PN  T++
Sbjct: 264 KCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRM-KLSGMKPNFITFL 322

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLC--FDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           ++L A SH G + +G K +  ++K       D   A+ LVDM G+ G++++A+ +   +P
Sbjct: 323 NVLNACSHAGLVDEG-KYYFDLMKESRIEPTDKHYAS-LVDMLGRAGKLEEALEIVTNMP 380

Query: 511 -RSSSVPWNAIISCHGIHGQGDKA 533
              +   W A+++   IH   + A
Sbjct: 381 IDPTESVWGALLTSCTIHKNTELA 404



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 4/245 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H L + +G    VF  + LV+ YA  G++ ++R  FD +  RNV TW+ M+  Y + 
Sbjct: 136 KSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQM 195

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   EA+  F +  L   L  + Y+F  V+  C N   L  G++I    +K  F+   FV
Sbjct: 196 GENEEALWLFKE-ALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFV 254

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SL+ +Y + G    A ++FD++P+R+ G WNAM+    Q  +  + +++   M+L G+
Sbjct: 255 GSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGM 314

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + IT  ++L  C+ +  +  G      + +  +E       +L++M  + G +  AL 
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALE 374

Query: 301 VFDQM 305
           +   M
Sbjct: 375 IVTNM 379



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 5/201 (2%)

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N      +L + +   ++ +G+++H  ++K+ L     VA  L++ Y K     D+   F
Sbjct: 14  NYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
              P+ S+  W++IISC   +     +L F R+M+   +RPD     S   +C   G++S
Sbjct: 74  EDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSC---GILS 130

Query: 567 EGQ--RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
                +  H +  + G    +     +VD++ + G +  A      MP+R   +  G + 
Sbjct: 131 RCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMY 190

Query: 625 GACRIHGNMELGAVASDRLFE 645
           G  ++  N E   +  + LFE
Sbjct: 191 GYAQMGENEEALWLFKEALFE 211



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           T L   +++  L + S    + F  + LV+ Y+  GDL  +   FD +  RN+  WN+M+
Sbjct: 231 TLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAML 290

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLG-F 174
               +     + ++ F +  L SG++P+F TF  VL AC +  LVD  K +  ++K    
Sbjct: 291 KACAQHSHTQKVIELFKRMKL-SGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRI 349

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
           E      ASL+ M  R G    A ++  +MP+  + S W A+++
Sbjct: 350 EPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLT 393


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/743 (34%), Positives = 405/743 (54%), Gaps = 56/743 (7%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           + S   L+  Y+ LG +  +R  FD +  +N+ +WNS+++ Y +  R  EA + F + + 
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
                             RN +               W+  V+      Y   G+ N AR
Sbjct: 158 ------------------RNTIS--------------WNGLVSG-----YINNGMINEAR 180

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           ++FD MP R+  SW AM+ GY + G   EA  +  +M  + V    + +  +L    R D
Sbjct: 181 EVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE-GRID 239

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
                      +     E ++    N+I  Y + G +  A  +FD+M  R+VVSW ++I 
Sbjct: 240 EACR-------LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMIT 292

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y Q+     A   F  M +          VS T+++    +C   R      +     +
Sbjct: 293 GYVQNQQVDIARKLFEVMPEK-------NEVSWTAMLKGYTNC--GRLDEASELFNAMPI 343

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
           + V+  NA++  + + G +  A  VF+ +  KD  +W+ +I  Y + GL  +A+E+F+MM
Sbjct: 344 KSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMM 403

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           +    I PN  + +S+L   + +  L  G +IHA+++++    DV+VA+ L+ MY KCG 
Sbjct: 404 QR-EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGN 462

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +  A  +F +      V WN+II+ +  HG G +AL  F  M   G+ PD +TFV +L+A
Sbjct: 463 LAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSA 522

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS++G V +G   F+ M+ ++ ++  ++HY CMVDL GRAG L  A + I+ MP+  DA 
Sbjct: 523 CSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAI 582

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWGALLGACR H  ++L  VA+ +L  ++ +N G ++L+SNIYA+ G+W+ V E+R   R
Sbjct: 583 IWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMR 642

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRT-HPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           DR + K PG S I V  KV  F  G+ + HP++ +I   L  L+  ++  GY PD+SFVL
Sbjct: 643 DRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVL 702

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            DV+E+EK   L  HSE+LA+A+G++  P   PI++ KNLRVCGDCH   K I+++T RE
Sbjct: 703 HDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGRE 762

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RD+NRFHHFKDG CSC DYW
Sbjct: 763 IILRDANRFHHFKDGSCSCRDYW 785



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 239/460 (51%), Gaps = 20/460 (4%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +   S   LV+ Y N G ++ +R  FD +  RNV +W +M+  YV+ G +SEA   F+Q 
Sbjct: 158 RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQM 217

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGK-KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                  P+       +     L +G+    C +  +  E DV    +++  YC+ G   
Sbjct: 218 -------PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLV 270

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR LFD+MP R+  SW  MI+GY Q+   V+    L E+  E   +    +      C 
Sbjct: 271 EARMLFDEMPRRNVVSWTTMITGYVQN-QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCG 329

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           R D   +  L +   +K     ++   N +I  + + G +  A +VFDQM E+D  +W++
Sbjct: 330 RLDE--ASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSA 382

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  YE+    + A   F  MQ+ GI+P+  +L+S+ S+ A L +  + R +H  ++ R 
Sbjct: 383 MIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV-RS 441

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
            F  DV + + ++ MY K G +  A  VF+   VKDV+ WN++ITGYAQ+GL  EA+ VF
Sbjct: 442 QFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVF 501

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCLCFDVFVATCLVDMYG 494
             M   + I P+  T+V +L A S+ G +++G++I ++   K  +   +    C+VD+ G
Sbjct: 502 HDM-HFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLG 560

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
           + G++++AM L  ++P  + ++ W A++     H + D A
Sbjct: 561 RAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 144/271 (53%), Gaps = 10/271 (3%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + +C +L     L   +     IK+V +   ++  +   G++  +R  FD +  ++  TW
Sbjct: 325 YTNCGRLDEASELFNAM----PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVL 170
           ++MI VY R G   +A++ F +     G+RP+F +   VL  C    NL  G++IH  ++
Sbjct: 381 SAMIKVYERKGLELDALELF-RMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLV 439

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           +  F+ DV+VA+ LL MY + G    A+++FD   V+D   WN++I+GY Q G  VEAL 
Sbjct: 440 RSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALR 499

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMY 289
           +  +M   G+  D +T   +L  C+ + N+  GL I   +  K+ +E  +     ++++ 
Sbjct: 500 VFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLL 559

Query: 290 AKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            + G +  A+ + ++M ME D + W +++ A
Sbjct: 560 GRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 163/360 (45%), Gaps = 57/360 (15%)

Query: 259 NILSGLLIHLYIVKHGLEFNLFVS-NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           ++ SGL+    ++      N  +S N+LI  Y++ G +  A  VFD+M +++++SWNSI+
Sbjct: 77  SMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIV 136

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y Q+  P  A   F  M +     + ++   L S          +R V   +  R   
Sbjct: 137 AGYFQNKRPQEAQNMFDKMSER----NTISWNGLVSGYINNGMINEAREVFDRMPER--- 189

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             +V+   A+V  Y K G+I+ A  +F  +P K+V+SW  ++ G  Q G   EA  +F M
Sbjct: 190 --NVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDM 247

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI------KNCLCFDVFVA----- 486
           M E + +     T  +++  Y  VG L     + AR++      +N + +   +      
Sbjct: 248 MPEKDVV-----TRTNMIGGYCQVGRL-----VEARMLFDEMPRRNVVSWTTMITGYVQN 297

Query: 487 ---------------------TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
                                T ++  Y  CGR+D+A  LF  +P  S V  NA+I C G
Sbjct: 298 QQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFG 357

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            +G+  KA    RQ+ D+    D  T+ +++      GL  +    F MMQ E GI+P+ 
Sbjct: 358 QNGEVPKA----RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQRE-GIRPNF 412


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/601 (37%), Positives = 361/601 (60%), Gaps = 7/601 (1%)

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
           C   +   A+  +D ++  G+  D  T + ++  C  +  +  G LI  ++  +G    +
Sbjct: 37  CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           F+ N LINMY KF ++  A ++FDQM +R+V+SW ++I+AY +      A      M + 
Sbjct: 97  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            ++P++ T    +S++   N   + R +H  I++ G    DV + +A++D++AKLG    
Sbjct: 157 NVRPNVYTY---SSVLRSCNGMSDVRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPED 212

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A +VF+ +   D I WN++I G+AQN  +  A+E+F+ M+    I   Q T  S+L A +
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACT 271

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +  L  G++ H  ++K     D+ +   LVDMY KCG ++DA+ +F Q+     + W+ 
Sbjct: 272 GLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +IS    +G   +AL  F +M   G +P++IT V +L ACSH+GL+ +G  YF  M++ +
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P  +HYGCM+DL G+AG L  A   +  M   PDA  W  LLGACR+  NM L   A
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           + ++  +D E+ G Y L+SNIYAN  KW+ V+E+R+  RDRG+KK PG S IEVN ++  
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+ +HP+  ++  +L  L  ++  +GYVP+ +FVLQD+E ++ E  L  HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG+++ P +  I+I KNLR+CGDCH + K  S++  R I++R   R+HHF+DG CSCGDY
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDY 629

Query: 820 W 820
           W
Sbjct: 630 W 630



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 189/362 (52%), Gaps = 26/362 (7%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           L  +G    +F    L+N Y     L+ +   FD +  RNV +W +MIS Y +C    +A
Sbjct: 87  LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
           ++      L   +RP+ YT+  VL++C  + D + +HC ++K G E DVFV ++L+ ++ 
Sbjct: 147 LELLV-LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G    A  +FD+M   D+  WN++I G+ Q+  +  AL++   M+  G   +  T+ S
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  C     +  G+  H++IVK+  + +L ++N L++MY K G +  ALRVF+QM ERD
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V++W+++I+   Q+     A   F  M+ +G +P+ +T      IV  L  C      H 
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT------IVGVLFACS-----HA 372

Query: 370 FIMRRGWF----MEDVIIGNAV-------VDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
            ++  GW+    M+ +   + V       +D+  K G ++ A  +   +  + D ++W T
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432

Query: 418 LI 419
           L+
Sbjct: 433 LL 434


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/587 (40%), Positives = 356/587 (60%), Gaps = 3/587 (0%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           MR  G   +  T +SIL   A +  +L G  +H  I KHG + N+FV   L++MYAK   
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAGIQPDLLTLVSLTS 353
           M  A+RVFDQM ER++VSWNS+I  +  +N    A G F   +++  + P+ +++ S+ S
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A +      R VHG +++ G  +    + N+++DMY K    +    +F+ +  +DV+
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFG-LVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV 179

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +WN L+ G+ QN    EA   F +M     I P++ ++ ++L + + + AL QG  IH +
Sbjct: 180 TWNVLVMGFVQNDKFEEACNYFWVMRR-EGILPDEASFSTVLHSSASLAALHQGTAIHDQ 238

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           +IK     ++ +   L+ MY KCG + DA  +F  +   + + W A+IS + +HG  ++ 
Sbjct: 239 IIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 298

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           +  F  ML EG+ P H+TFV +L+ACSH+G V EG  +F+ M++   + P  +HY CMVD
Sbjct: 299 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 358

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L GRAG L  A  FI++MP++P  S+WGALLGACR +GN+++G  A++RLFE++  N G 
Sbjct: 359 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 418

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YVL++N+    G+ E  +EVR L    G++K PG S I+V N   +F   +R+H   ++I
Sbjct: 419 YVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEI 478

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
           Y  L  L   +K  GYV +  FV   +EE+E+E  L  HSE+LA+AFG+++ P  SPI+I
Sbjct: 479 YKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRI 538

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KNLR CG CH   K  S+I +REIIVRD NRFH F DG CSCGDYW
Sbjct: 539 KKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 234/461 (50%), Gaps = 21/461 (4%)

Query: 140 SGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           SG  P+ +TF  +L A      ++ G+++H  + K GF+ ++FV  +L+ MY +    + 
Sbjct: 4   SGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 63

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL-DEMRLEGVSMDPITVASILPVCA 255
           A ++FD MP R+  SWN+MI G+  +     A+ +  D +R + V  + ++V+S+L  CA
Sbjct: 64  AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  +H  +VK GL    +V N+L++MY K       +++F  + +RDVV+WN 
Sbjct: 124 NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 183

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           ++  + Q++    A  +F  M++ GI PD  +  ++    A L       ++H  I++ G
Sbjct: 184 LVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLG 243

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +     I+G +++ MYAK G +  A  VFEG+   +VISW  +I+ Y  +G A++ IE+F
Sbjct: 244 YVKNMCILG-SLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELF 302

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMY 493
           + M     I P+  T+V +L A SH G + +G+  H   +K     +       C+VD+ 
Sbjct: 303 EHMLS-EGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISC---HGIHGQGDKALNFFRQMLDEGVRPDH 549
           G+ G +D+A      +P + +   W A++     +G    G +A     +M  E   P +
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPYNPGN 418

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
             +V L   C+ SG + E      +M    G+    K  GC
Sbjct: 419 --YVLLANMCTRSGRLEEANEVRRLM----GVNGVRKEPGC 453



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 192/419 (45%), Gaps = 18/419 (4%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           H ++LH+L+   G    +F  T LV+ YA   D+  +   FD +  RN+ +WNSMI  + 
Sbjct: 28  HGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFF 87

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
                  AV  F        + P+  +   VL AC N+     G+++H  V+K G     
Sbjct: 88  HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLT 147

Query: 179 FVAASLLHMY--CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           +V  SL+ MY  CRF    V  KLF  +  RD  +WN ++ G+ Q+    EA +    MR
Sbjct: 148 YVMNSLMDMYFKCRFFDEGV--KLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR 205

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            EG+  D  + +++L   A    +  G  IH  I+K G   N+ +  +LI MYAK G + 
Sbjct: 206 REGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLV 265

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A +VF+ + + +V+SW ++I+AY+           F  M   GI+P  +T V + S  +
Sbjct: 266 DAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS 325

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIG----NAVVDMYAKLGIINSACAVFEGLPVKDV 412
                    + H   M++   + D+  G      +VD+  + G ++ A    E +P+K  
Sbjct: 326 HTGRVEEGLA-HFNSMKK---IHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPT 381

Query: 413 IS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
            S W  L+    + G      E  + + E    NP  G YV +    +  G L +  ++
Sbjct: 382 PSVWGALLGACRKYGNLKMGREAAERLFEMEPYNP--GNYVLLANMCTRSGRLEEANEV 438



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 13/213 (6%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   LH    +H  ++  G +K +     L+  YA  G L  +   F+ I   NV +W +
Sbjct: 225 SLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTA 284

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VDGKKIHCSVLKLG 173
           MIS Y   G  ++ ++ F +  L+ G+ P   TF  VL AC +   V+    H + +K  
Sbjct: 285 MISAYQLHGCANQVIELF-EHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI 343

Query: 174 FEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGN---AVE 227
            + +      A ++ +  R G  + A++  + MP++ + S W A++    + GN     E
Sbjct: 344 HDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGRE 403

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           A + L EM       +P     +  +C RS  +
Sbjct: 404 AAERLFEME----PYNPGNYVLLANMCTRSGRL 432


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/733 (36%), Positives = 397/733 (54%), Gaps = 56/733 (7%)

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           YA +G +  +R  FD +  + + +WNSM++ Y +  R  EA             R  F  
Sbjct: 26  YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREA-------------RYLFDK 72

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
            P      RN V               W+      L+  Y +  + + ARK FD MP R+
Sbjct: 73  MPE-----RNTVS--------------WN-----GLISGYVKNRMVSEARKAFDTMPERN 108

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SW AM+ GY Q G   EA  +  +M  + V    + +  ++ V  R  +   GL   +
Sbjct: 109 VVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQV--RRIDEARGLF-DI 165

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             VK     ++    N+I+ Y + G +  A  +FD+M  R+V+SW ++I+ Y Q+     
Sbjct: 166 MPVK-----DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDV 220

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M +          VS T+++  +   +  R      +     ++ V+  NA++
Sbjct: 221 ARKLFEVMPEK-------NEVSWTAML--MGYTQGGRIEEASELFDAMPVKAVVACNAMI 271

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
             + + G +  A  VF+ +  KD  +W+ +I  Y + G   EA+ +F +M+    +  N 
Sbjct: 272 LGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQR-EGVQSNF 330

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            + +S+L   + + +L  G ++HA ++K+    DVFVA+ L+ MY KCG +  A  +F +
Sbjct: 331 PSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDR 390

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
                 V WN+II+ +  HG  ++AL  F +M   G+  D +TFV +L+ACS++G V EG
Sbjct: 391 FSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEG 450

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
              F  M+ ++ ++P  +HY CMVDL GRAG +  A + IQ MPV  DA IWGALLGACR
Sbjct: 451 LEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACR 510

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
            H NM L  VA+ +L +++ +N G Y+L+SNIYA+ G+W  V E+R   R + + K+PG 
Sbjct: 511 THMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGC 570

Query: 689 SSIEVNNKVDIFYTGNRT-HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           S IEV  +V +F  G  T HP+   I   L  L   ++  GY PD SFVL DV+E+EK  
Sbjct: 571 SWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVR 630

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
            L  HSERLA+AFG++  P   PI++ KNLRVCGDCH+  K I++IT REII+RD+NRFH
Sbjct: 631 SLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFH 690

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSC DYW
Sbjct: 691 HFKDGFCSCRDYW 703



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 228/482 (47%), Gaps = 76/482 (15%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +   S   L++ Y     +S +R  FD +  RNV +W +M+  YV+ G +SEA   F+Q 
Sbjct: 76  RNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135

Query: 137 ---------TLTSGL----RPD----FYTFPPV--LKACRNLVDGKKIHCSVLKLGFEWD 177
                     +  GL    R D     +   PV  + A  N++ G   +C   +L    +
Sbjct: 136 PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISG---YCQEGRLAEARE 192

Query: 178 VFVA---------ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           +F            +++  Y + G  +VARKLF+ MP ++  SW AM+ GY Q G   EA
Sbjct: 193 LFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEA 252

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            ++ D M                PV A                       +   N +I  
Sbjct: 253 SELFDAM----------------PVKA-----------------------VVACNAMILG 273

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           + + G +  A +VFDQ+ E+D  +W+++I  YE+    + A   F  MQ+ G+Q +  +L
Sbjct: 274 FGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSL 333

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           +S+ S+ A L    + R VH  ++ +  F  DV + + ++ MY K G +  A  +F+   
Sbjct: 334 ISVLSVCASLASLDHGRQVHAELV-KSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFS 392

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-TYVSILPAYSHVGALRQG 467
            KD++ WN++ITGYAQ+GL  EA++VF  M  C+      G T+V +L A S+ G +++G
Sbjct: 393 PKDIVMWNSIITGYAQHGLVEEALQVFHEM--CSSGMATDGVTFVGVLSACSYTGKVKEG 450

Query: 468 IKIHARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
           ++I   +    L         C+VD+ G+ G ++DAM L  ++P  + ++ W A++    
Sbjct: 451 LEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACR 510

Query: 526 IH 527
            H
Sbjct: 511 TH 512



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 190/402 (47%), Gaps = 37/402 (9%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY- 134
           +K V + T +++ Y   G L+ +R  FD +  RNV +W +MIS YV+ G++  A   F  
Sbjct: 168 VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEV 227

Query: 135 -----QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH----CSVLKLGFEWDVFVAASLL 185
                + + T+ L    YT    ++    L D   +     C+ + LGF  +  VA    
Sbjct: 228 MPEKNEVSWTAMLMG--YTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAK--- 282

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
                      AR++FD +  +D G+W+AMI  Y + G  VEAL++   M+ EGV  +  
Sbjct: 283 -----------ARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFP 331

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           ++ S+L VCA   ++  G  +H  +VK   + ++FV++ LI MY K G +  A ++FD+ 
Sbjct: 332 SLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRF 391

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
             +D+V WNSII  Y Q      A   F  M  +G+  D +T V + S  +     +   
Sbjct: 392 SPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGL 451

Query: 366 SVHGFIMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG-- 421
            +    M+  + +E      A +VD+  + G++N A  + + +PV+ D I W  L+    
Sbjct: 452 EIFES-MKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACR 510

Query: 422 -YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            +    LA  A +    +E       N G Y+ +   Y+  G
Sbjct: 511 THMNMNLAEVAAKKLLQLEP-----KNAGPYILLSNIYASKG 547



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 200/456 (43%), Gaps = 67/456 (14%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           S +  Y R G    AR++FD+MP +   SWN+M++GY Q+    EA  + D+M       
Sbjct: 21  SQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP------ 74

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
                                            E N    N LI+ Y K  M+  A + F
Sbjct: 75  ---------------------------------ERNTVSWNGLISGYVKNRMVSEARKAF 101

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M ER+VVSW +++  Y Q      A   F  M +  +       VS T ++  L   R
Sbjct: 102 DTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV-------VSWTVMLGGLIQVR 154

Query: 363 NSRSVHGF--IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
                 G   IM     ++DV+    ++  Y + G +  A  +F+ +P ++VISW T+I+
Sbjct: 155 RIDEARGLFDIMP----VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMIS 210

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI-HARVIKNCL 479
           GY QNG    A ++F++M E NE+     ++ ++L  Y+  G + +  ++  A  +K   
Sbjct: 211 GYVQNGQVDVARKLFEVMPEKNEV-----SWTAMLMGYTQGGRIEEASELFDAMPVKA-- 263

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
              V     ++  +G+ G +  A  +F Q+       W+A+I  +   G   +ALN F  
Sbjct: 264 ---VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFAL 320

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           M  EGV+ +  + +S+L+ C+    +  G Q +  +++ +F     +     ++ ++ + 
Sbjct: 321 MQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVA--SVLITMYVKC 378

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           G L  A         + D  +W +++     HG +E
Sbjct: 379 GDLVKARQIFDRFSPK-DIVMWNSIITGYAQHGLVE 413



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 67/346 (19%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N+ I  YA+ G +  A RVFD+M ++ +VSWNS++A Y Q+N P  A   F  M +    
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPE---- 75

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
                              RN+ S         W        N ++  Y K  +++ A  
Sbjct: 76  -------------------RNTVS---------W--------NGLISGYVKNRMVSEARK 99

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F+ +P ++V+SW  ++ GY Q GL SEA  +F  M E N           ++     +G
Sbjct: 100 AFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKN-----------VVSWTVMLG 148

Query: 463 ALRQGIKI-HARVIKNCLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            L Q  +I  AR + + +   DV   T ++  Y + GR+ +A  LF ++PR + + W  +
Sbjct: 149 GLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTM 208

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS +  +GQ D A   F  M ++    + +++ ++L   +  G + E    F  M     
Sbjct: 209 ISGYVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAM----- 259

Query: 581 IKPHLKHYGC--MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
             P      C  M+  FG+ G +  A      +  + D + W A++
Sbjct: 260 --PVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT-WSAMI 302



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 7/172 (4%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L H +++HA LV S     VF ++ L+  Y   GDL  +R  FD  S +++  WNS
Sbjct: 342 SLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNS 401

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVL-K 171
           +I+ Y + G + EA+  F++   +SG+  D  TF  VL AC     + +G +I  S+  K
Sbjct: 402 IITGYAQHGLVEEALQVFHEMC-SSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSK 460

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQS 222
              E      A ++ +  R GL N A  L   MPV  D+  W A++ G C++
Sbjct: 461 YLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL-GACRT 511


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/617 (37%), Positives = 364/617 (58%), Gaps = 16/617 (2%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S SWN  +          E++ +   M   G S D  +   IL  CA     +SG  +H 
Sbjct: 15  STSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 74

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV--VSWNSIIAAYEQSNDP 326
           ++++ G E   FV   LI+MY K G++  A +VF++        V +N++I+ Y  ++  
Sbjct: 75  HVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKV 134

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M++ G+  D +T++ L  +          RS+HG  ++ G + E V + N+
Sbjct: 135 SDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSE-VAVLNS 193

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
            + MY K G + S   +F+ +PVK +I+WN +I+GY+QNGLA + +E+F+ M+    + P
Sbjct: 194 FITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSG-VCP 252

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           +  T VS+L + +H+GA + G ++   V  N    +VF++  L+ MY +CG +  A ++F
Sbjct: 253 DPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVF 312

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +P  S V W A+I C+G+HG G+  L  F  M+  G+RPD   FV +L+ACSHSGL  
Sbjct: 313 DIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 372

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G   F  M+ E+ ++P  +HY C+VDL GRAG L  A  FI +MPV PD ++WGALLGA
Sbjct: 373 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGA 432

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C+IH N+++  +A  ++ E +  N+GYYVLMSNIY++    EG+  +R + R+R  +K P
Sbjct: 433 CKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 492

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G+S +E   KV +F  G+R+H + E+++  L  L   +  L           +++ D  E
Sbjct: 493 GYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELA---------GNMDCDRGE 543

Query: 747 HILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
            + ++   HSERLAIAFGI++S P + I + KNLRVC DCH + K +S+I +R  +VRD+
Sbjct: 544 EVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDA 603

Query: 804 NRFHHFKDGICSCGDYW 820
           +RFH+FKDG+CSC DYW
Sbjct: 604 SRFHYFKDGVCSCKDYW 620



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 252/491 (51%), Gaps = 19/491 (3%)

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCS 168
           +WN  +         +E++   Y+  L SG  PD ++FP +LK+C +L   V G+++HC 
Sbjct: 17  SWNVRLRELAYQSLFTESIS-LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGNAV 226
           V++ G E + FV  +L+ MYC+ GL   ARK+F++ P   +    +NA+ISGY  +    
Sbjct: 76  VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +A  +   M+  GVS+D +T+  ++P+C   + +  G  +H   VK G    + V N+ I
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFI 195

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY K G +    R+FD+M  + +++WN++I+ Y Q+         F  M+ +G+ PD  
Sbjct: 196 TMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPF 255

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           TLVS+ S  A L   +  + V   +   G F  +V + NA++ MYA+ G +  A AVF+ 
Sbjct: 256 TLVSVLSSCAHLGAKKIGQEVGELVEANG-FAPNVFLSNALISMYARCGNLAKARAVFDI 314

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +PVK ++SW  +I  Y  +G+    + +F  M +   I P+   +V +L A SH G   +
Sbjct: 315 MPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDK 373

Query: 467 GIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISC 523
           G+++  R +K     +      +CLVD+ G+ GR+D+AM     +P       W A++  
Sbjct: 374 GLELF-RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGA 432

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE--FGI 581
             IH   D A   F ++++    P +I +  L++         EG     +M  E  F  
Sbjct: 433 CKIHKNVDMAELAFAKVIE--FEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRK 490

Query: 582 KP---HLKHYG 589
           KP   +++H G
Sbjct: 491 KPGYSYVEHKG 501



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 187/387 (48%), Gaps = 26/387 (6%)

Query: 50  FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD--- 103
           F  + +SC  L      ++LH  ++  G     F  T L++ Y   G +  +R  F+   
Sbjct: 53  FPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENP 112

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLV 160
           H S   V  +N++IS Y    ++S+A   F +   T G+  D  T   ++  C     L 
Sbjct: 113 HSSQLGV-CYNALISGYTANSKVSDAAFMFRRMKET-GVSVDSVTILGLVPLCTVPEYLW 170

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+ +H   +K G   +V V  S + MY + G     R+LFD+MPV+   +WNA+ISGY 
Sbjct: 171 LGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYS 230

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+G A + L++ ++M+  GV  DP T+ S+L  CA       G  +   +  +G   N+F
Sbjct: 231 QNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVF 290

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +SN LI+MYA+ G +  A  VFD M  + +VSW ++I  Y       T    F  M + G
Sbjct: 291 LSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRG 350

Query: 341 IQPDLLTLVSLTSIVAQ--LNDCRNSRSVHGF-IMRRGWFMEDVIIG----NAVVDMYAK 393
           I+PD    V + S  +   L D    + +  F  M+R + +E    G    + +VD+  +
Sbjct: 351 IRPDGAVFVMVLSACSHSGLTD----KGLELFRAMKREYKLEP---GPEHYSCLVDLLGR 403

Query: 394 LGIINSACAVFEGLPVK-DVISWNTLI 419
            G ++ A    + +PV+ D   W  L+
Sbjct: 404 AGRLDEAMEFIDSMPVEPDGAVWGALL 430


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/667 (37%), Positives = 381/667 (57%), Gaps = 8/667 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           ++L   K +H  +LK G  +  F    L+  Y +  +   ARKLFD+MP R   +WN+MI
Sbjct: 15  KSLTTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMI 73

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           S +   G   EA+++ D M  EGV  D  T ++I    +       G   H   V  G E
Sbjct: 74  SSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFE 133

Query: 277 F-NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             + FV+  +++MYAKFG M+ A  VFD+++++DVV + ++I  Y Q      A   F  
Sbjct: 134 VSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFED 193

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKL 394
           M  + I+P+  TL S+      L D  N + +HG +++ G  +E V+    +++ MY+K 
Sbjct: 194 MVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSG--LESVVASQTSLLTMYSKC 251

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
            ++  +  VF  L     ++W + I G  QNG    A+ +F+ M  C+ I+PN  T+ SI
Sbjct: 252 NMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS-ISPNHFTFSSI 310

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S +  L  G +IHA  +K  +  + +V   L+ +YGKCG ++ A S+F  +     
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDV 370

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V  N +I  +  +G G +AL  F +M   G +P+ +TF+S+L AC+++GLV EG + F +
Sbjct: 371 VSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSL 430

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           ++    I+    HY CM+DL GRA     A   I+     PD   W  LL AC+IHG +E
Sbjct: 431 IRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVE 489

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +      ++ +    + G ++L++NIYA+ GKW+ V E++S  RD  LKKTP  S ++++
Sbjct: 490 MAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDID 549

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
            +V  F  G+ +HP+  +I + L  L  K+ +LGY PD  FVLQD+EE++K   L  HSE
Sbjct: 550 REVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSE 609

Query: 755 RLAIAFGIISSPPK-SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           +LAIAF +  +  K + I+IFKNLRVCGDCH+W KF+S +T R+II RD+ RFHHFK GI
Sbjct: 610 KLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGI 669

Query: 814 CSCGDYW 820
           CSC DYW
Sbjct: 670 CSCKDYW 676



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 261/505 (51%), Gaps = 23/505 (4%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F +   L  +K LH  ++ SG + + F   KL++ Y     ++ +R  FD +  R++ TW
Sbjct: 11  FTNKKSLTTLKSLHTHILKSGSLFSFFGH-KLIDGYIKCSVITEARKLFDEMPNRHIVTW 69

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVL 170
           NSMIS +V  G+  EA++  Y   L  G+ PD YTF  + KA   +    +G+K H   +
Sbjct: 70  NSMISSHVSRGKTKEAIE-LYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAV 128

Query: 171 KLGFEW-DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
            LGFE  D FVA  ++ MY +FG    AR +FD +  +D   + A+I GY Q G   EAL
Sbjct: 129 VLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEAL 188

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           ++ ++M    +  +  T+AS+L  C    ++++G LIH  +VK GLE  +    +L+ MY
Sbjct: 189 EVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMY 248

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K  M+  +++VF+ +     V+W S I    Q+     A   F  M +  I P+  T  
Sbjct: 249 SKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFS 308

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD-----MYAKLGIINSACAVF 404
           S+    + L        +H   ++ G      + GN  VD     +Y K G +  A +VF
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLG------VDGNKYVDAALIHLYGKCGNVEKARSVF 362

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           E L   DV+S NT+I  YAQNG   EA+E+F+ M++     PN  T++SIL A ++ G +
Sbjct: 363 ESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGH-KPNVVTFISILLACNNAGLV 421

Query: 465 RQGIKIHARVIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            +G +I + +  N    L  D +  TC++D+ G+  R ++A  L  +      + W  ++
Sbjct: 422 EEGCQIFSLIRNNHSIELTRDHY--TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLL 479

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVR 546
           +   IHG+ + A  F ++MLD+  R
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPR 504


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/594 (39%), Positives = 351/594 (59%), Gaps = 5/594 (0%)

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA+D+L++    G + D   +  ++  CA +  +  G  IH ++    L+   F+SN L+
Sbjct: 27  EAVDLLEQSGAAGGTGD---LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLV 83

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MY K G +  A RVFD M  ++V SW  ++A + QS   + A   F  M Q G  PD +
Sbjct: 84  DMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRV 143

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
            L+               R +H      G    D++  NA+++MY K G I  A AVF  
Sbjct: 144 ALLKFIDSCGAAKALSQGREIHSAAASCG-MDSDLVTANAIINMYGKCGSIGEAFAVFTR 202

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +P K+VISW+T+I  + QN LA EA+  F++M++   +  ++ TYVS+L AY+ VGAL  
Sbjct: 203 MPEKNVISWSTMIAAFCQNELADEALLFFKLMQQ-EGMELDRITYVSVLDAYTSVGALEL 261

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  +H R++   L   + V   LV+MYGKCG  DDA  +F  +   + V WNA+++ +G 
Sbjct: 262 GKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQ 321

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           +G+  +AL  F  M  EGVRP+ ITFV++L  CSHSG   +   +F  M+++FGI P   
Sbjct: 322 NGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREV 381

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           H+GC++D+ GR+G L  A   IQ MPV  DA +W +LL AC  H + +  A A++  F+ 
Sbjct: 382 HFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQR 441

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           +      Y+++SN+YA + KW+   +VR      G++K  G S IE++ +V  F  G+  
Sbjct: 442 EPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSI 501

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP   +I+  L+ L ++M+  GY PD+  V+  +EE+EK+ +L  HSE+LA+AFGI S+P
Sbjct: 502 HPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTP 561

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P++P+ I KNLRVC DCH+  KFIS +  R I VRDSNRFHHF  G CSCGDYW
Sbjct: 562 PRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 195/380 (51%), Gaps = 12/380 (3%)

Query: 49  DFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           D + L + C     L   +R+H  +      +  F S  LV+ Y   G L  ++  FD +
Sbjct: 43  DLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAM 102

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
            ++NV++W  +++ +V+ GR  EA+  F++     G  PD       + +C   + L  G
Sbjct: 103 QHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMC-QEGELPDRVALLKFIDSCGAAKALSQG 161

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           ++IH +    G + D+  A ++++MY + G    A  +F  MP ++  SW+ MI+ +CQ+
Sbjct: 162 REIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQN 221

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
             A EAL     M+ EG+ +D IT  S+L        +  G  +H+ IV  GL+ ++ V 
Sbjct: 222 ELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVG 281

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L+NMY K G    A  VFD M+E++VVSWN+++AAY Q+     A   F +M   G++
Sbjct: 282 NTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVR 341

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR--GWFMEDVIIGNAVVDMYAKLGIINSA 400
           P+ +T V++    +     +++ S H   MR+  G    +V  G  ++DM  + G +  A
Sbjct: 342 PNDITFVTILYCCSHSGKFKDAVS-HFVEMRQDFGITPREVHFG-CLIDMLGRSGKLEEA 399

Query: 401 CAVFEGLPV-KDVISWNTLI 419
             + + +PV  D + W +L+
Sbjct: 400 EELIQAMPVPADAVLWTSLL 419



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 132/278 (47%), Gaps = 8/278 (2%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY 107
           + F D   +   L   + +H+     G    + ++  ++N Y   G +  +   F  +  
Sbjct: 146 LKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPE 205

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKK 164
           +NV +W++MI+ + +   L++    F++     G+  D  T+  VL A  +   L  GK 
Sbjct: 206 KNVISWSTMIAAFCQ-NELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKA 264

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H  ++  G +  + V  +L++MY + G  + AR +FD M  ++  SWNAM++ Y Q+G 
Sbjct: 265 LHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGR 324

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH--GLEFNLFVS 282
           + EAL + D M LEGV  + IT  +IL  C+ S       + H   ++   G+       
Sbjct: 325 SREALALFDSMDLEGVRPNDITFVTILYCCSHSGK-FKDAVSHFVEMRQDFGITPREVHF 383

Query: 283 NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             LI+M  + G +  A  +   M +  D V W S++ A
Sbjct: 384 GCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCA 421


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/578 (39%), Positives = 355/578 (61%), Gaps = 5/578 (0%)

Query: 237 LEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           LEG  +  D     ++L  C     ++ G ++H +I++     ++ + N L+NMYAK G 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A +VF++M +RD V+W ++I+ Y Q + P  A  FF  M + G  P+  TL S+   
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A          +HGF ++ G F  +V +G+A++D+Y + G+++ A  VF+ L  ++ +S
Sbjct: 171 AAAERRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           WN LI G+A+     +A+E+FQ M   +   P+  +Y S+  A S  G L QG  +HA +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
           IK+      F    L+DMY K G I DA  +F ++ +   V WN++++ +  HG G +A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
            +F +M   G+RP+ I+F+S+LTACSHSGL+ EG  Y+ +M+++ GI P   HY  +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A  FI+ MP+ P A+IW ALL ACR+H N ELGA A++ +FE+D ++ G +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           V++ NIYA+ G+W     VR   ++ G+KK P  S +E+ N + +F   +  HP+ E+I 
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
            +   + AK+K LGYVPD S V+  V++ E+E  L  HSE++A+AF ++++PP S I I 
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           KN+RVCGDCH   K  S++  REIIVRD+NRFHHFKD 
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 221/447 (49%), Gaps = 41/447 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           ++ L + CT    L   + +HA ++ S     +     L+N YA  G L  +R  F+ + 
Sbjct: 63  YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
            R+  TW ++IS Y +  R  +A+  F+   L  G  P+ +T   V+KA    R    G 
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDAL-LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K GF+ +V V ++LL +Y R+GL + A+ +FD +  R+  SWNA+I+G+ +  
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL++   M  +G      + AS+   C+ +  +  G  +H Y++K G +   F  N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L++MYAK G +  A ++FD++ +RDVVSWNS++ AY Q      A  +F  M++ GI+P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-----FMEDVIIGNA-----VVDMYAK 393
           + ++ +S+ +  +           H  ++  GW       +D I+  A     VVD+  +
Sbjct: 362 NEISFLSVLTACS-----------HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410

Query: 394 LGIINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQ 448
            G +N A    E +P++   + W  L+     +    L + A E VF       E++P+ 
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVF-------ELDPDD 463

Query: 449 -GTYVSILPAYSHVGALRQGIKIHARV 474
            G +V +   Y+  G      ++  ++
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKM 490


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/719 (33%), Positives = 405/719 (56%), Gaps = 59/719 (8%)

Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           PP L+A         +H    K G    +  A  LL +Y +    + A KLFD++  +++
Sbjct: 48  PPSLRA---------LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNT 98

Query: 210 GSWNAMISGYCQSGNAVE-ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
            +W  +ISG+ ++  + E    +  EM+ +G   +  T++S+L  C+R +NI  G  IH 
Sbjct: 99  QTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHA 158

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           +I+++G+  ++ + N+++++Y K     +A   F+ M+E+DVVSWN +I AY +  D   
Sbjct: 159 WILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEK 218

Query: 329 AHGFFTT-------------------------------MQQAGIQPDLLTLVSLTSIVAQ 357
           +   F                                 M   G +   +T      +V+ 
Sbjct: 219 SLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSS 278

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK------- 410
           L+     R +HG ++  G    D  I +++V+MY K G ++ A  + + +P+        
Sbjct: 279 LSLVEVGRQLHGRVLTFG-LNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNF 337

Query: 411 ---------DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
                     ++SW+++++GY  NG   + ++ F+ M  C  I  +  T  +I+ A ++ 
Sbjct: 338 GVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMV-CELIVVDIRTVATIISACANA 396

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G L  G +IHA + K  L  D +V + L+DMY K G +DDA+ +F Q+   + V W ++I
Sbjct: 397 GILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMI 456

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S   +HGQG +A++ F  ML+ G+ P+ +TFV +L ACSH GL+ EG RYF MM++ + I
Sbjct: 457 SGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHI 516

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P ++HY  MV+L+GRAGHL  A NFI    +    S+W + L +CR+H N  +G   S+
Sbjct: 517 NPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSE 576

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L +    +   Y+L+SN+ ++  +W+    VRSL   RG+KK PG S +++ +++  F 
Sbjct: 577 MLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFT 636

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+R+HP+ ++IY  L +L  ++K +GY  D   V+QDVEE++ E +++ HSE+LA+ F 
Sbjct: 637 VGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVLISHHSEKLALVFS 696

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           II++ P++PI+I KNLR+C DCHN+ K+ SQ+ EREIIVRD++RFHHFK   CSCG+YW
Sbjct: 697 IINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/569 (24%), Positives = 255/569 (44%), Gaps = 68/569 (11%)

Query: 55  QSCTKLHH---------VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           Q C+ LH          ++ LH      G ++ + S+  L+  Y    +L  +   FD I
Sbjct: 34  QPCSFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEI 93

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
           +++N  TW  +IS + R    SE V   ++     G  P+ YT   VLK C    N+  G
Sbjct: 94  THKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFG 153

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHM-------------------------------YCRF 191
           K IH  +L+ G   DV +  S+L +                               Y R 
Sbjct: 154 KGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLRE 213

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    + ++F + P +D  SWN +I G  Q G    AL+ L  M   G    P+T +  L
Sbjct: 214 GDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIAL 273

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM------ 305
            + +    +  G  +H  ++  GL  + ++ ++L+ MY K G M  A  +   +      
Sbjct: 274 ILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLR 333

Query: 306 ----------MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
                      +  +VSW+S+++ Y  +         F +M    I  D+ T+ ++ S  
Sbjct: 334 KGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISAC 393

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A        + +H +I + G  + D  +G++++DMY+K G ++ A  +FE +   +V+ W
Sbjct: 394 ANAGILEFGKQIHAYIQKIGLRI-DAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLW 452

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            ++I+G A +G   EAI +F+ M     I PN+ T+V +L A SHVG + +G + + R++
Sbjct: 453 TSMISGCALHGQGKEAISLFEGMLNLG-IIPNEVTFVGVLNACSHVGLIEEGCR-YFRMM 510

Query: 476 KNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQ--VPRSSSVPWNAIISCHGIHGQGD 531
           K+    +  V   T +V++YG+ G + +A +  ++  +   +SV W + +S   +H   +
Sbjct: 511 KDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSV-WRSFLSSCRLHKNFN 569

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACS 560
              +   +ML +    D   ++ L   CS
Sbjct: 570 MGKS-VSEMLLQSAPSDPDAYILLSNMCS 597


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/621 (40%), Positives = 360/621 (57%), Gaps = 52/621 (8%)

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
           P + A I     R + I  G   H  IV HGL+ N F++  ++ MYA  G +  A+ VFD
Sbjct: 77  PSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFD 136

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGF----------FTTMQQAGIQPDLLTLVSLTS 353
           ++     + +NSII AY       T HG           +  M   G+  D  TL  +  
Sbjct: 137 RIDNPSSLLYNSIIRAY-------TRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLK 189

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L+     R VHG  +R G    D  +G +++DMY K G+I  A  +F+ + V+D+ 
Sbjct: 190 SCADLSRVCMGRCVHGQGLRVG-LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMA 248

Query: 414 SWNTLI-------------------------------TGYAQNGLASEAIEVF-QMMEEC 441
           SWN LI                               +GY QNG A +A+ +F +M+++ 
Sbjct: 249 SWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDG 308

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           +E+ PN  T VS+LPA +   AL +G +IH       L  +  V T L  MY KC  + +
Sbjct: 309 SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVE 368

Query: 502 AMSLFYQVPRSSS--VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           A   F  + ++    + WN +I+ +  HG G +A++ F  ML  GV+PD +TF+ LL+ C
Sbjct: 369 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGC 428

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGL+  G  +F+ M     ++P ++HY C+VDL GRAG L  A   I  MP++   S+
Sbjct: 429 SHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSV 488

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WGALL ACR H N+E+  +A+ RLF ++ +N G YVL+SN+YA  G WE V ++R+L + 
Sbjct: 489 WGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKY 548

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           +G+KK+PG S IE+N K  +F   +++HP+ ++IY  L  L  K+K  GY+PD SFVL D
Sbjct: 549 QGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHD 608

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           + E+EKE+ LT+HSE+LAIAFG++++ P   +++ KNLR+CGDCH  TKFIS+I EREII
Sbjct: 609 ISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREII 668

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD NRFH FKDG CSCGDYW
Sbjct: 669 VRDLNRFHCFKDGSCSCGDYW 689



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 214/477 (44%), Gaps = 66/477 (13%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  +FQ  T+ + +K   + HA +V+ G     F + K+V  YA+ GDL  +   FD I 
Sbjct: 80  YAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRID 139

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS--GLRPDFYTFPPVLKACRNLVD--- 161
             +   +NS+I  Y R G           +      GL  D +T P VLK+C +L     
Sbjct: 140 NPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCM 199

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN-------- 213
           G+ +H   L++G E D +V ASL+ MY + G+   ARKLFD M VRD  SWN        
Sbjct: 200 GRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMK 259

Query: 214 -----------------------AMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVA 248
                                  AMISGY Q+G A +AL + DEM  +G  M P  +T+ 
Sbjct: 260 EGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIV 319

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME- 307
           S+LP CA+S  +  G  IH +    GL  N  V   L  MYAK   +  A   FD + + 
Sbjct: 320 SVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQN 379

Query: 308 -RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS-------IVAQLN 359
            +++++WN++I AY      + A   F  M +AG+QPD +T + L S       I A LN
Sbjct: 380 GKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLN 439

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 418
              +  ++H    R   +         VVD+  + G +  A  +   +P++   S W  L
Sbjct: 440 HFNDMGTIHSVEPRVEHYA-------CVVDLLGRAGRLVEAKELISQMPMQAGPSVWGAL 492

Query: 419 ITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +     +    +A  A     ++E       N G YV +   Y+  G   +  K+ A
Sbjct: 493 LAACRSHRNLEIAELAARRLFVLEP-----DNSGNYVLLSNLYAEAGMWEEVKKLRA 544



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 187/402 (46%), Gaps = 44/402 (10%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G++ H  ++  G + + F+AA ++ MY   G  + A  +FD +    S  +N++I  Y +
Sbjct: 96  GQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTR 155

Query: 222 SGNAVEALDILD---EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
            G        L+    M   G+  D  T+  +L  CA    +  G  +H   ++ GLE +
Sbjct: 156 HGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGD 215

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH-------- 330
            +V  +LI+MY K G++  A ++FD+M+ RD+ SWN++IA Y +  +   A         
Sbjct: 216 FYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEH 275

Query: 331 -----------------------GFFTTMQQAG--IQPDLLTLVSLTSIVAQLNDCRNSR 365
                                  G F  M Q G  ++P+ +T+VS+    AQ       R
Sbjct: 276 RNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGR 335

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYA 423
            +H F    G  +    +  A+  MYAK   +  A   F+ +    K++I+WNT+IT YA
Sbjct: 336 RIHDFANGIGLHLNSS-VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            +G   EA+ +F+ M     + P+  T++ +L   SH G +  G+  H   +      + 
Sbjct: 395 SHGCGVEAVSIFENMLRAG-VQPDAVTFMGLLSGCSHSGLIDAGLN-HFNDMGTIHSVEP 452

Query: 484 FVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
            V    C+VD+ G+ GR+ +A  L  Q+P ++    W A+++
Sbjct: 453 RVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLA 494



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 8/249 (3%)

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P+  +Y  I    +    ++ G + HA+++ + L  + F+A  +V MY   G +D A+ +
Sbjct: 75  PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 506 FYQVPRSSSVPWNAIISCHGIHG---QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
           F ++   SS+ +N+II  +  HG        L  + +M   G+  D+ T   +L +C+  
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADL 194

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
             V  G R  H      G++        ++D++ + G +G A      M VR D + W A
Sbjct: 195 SRVCMG-RCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNA 252

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           L+      G  E+G VA D    ++  N+  +  M + Y   G  E    +       G 
Sbjct: 253 LIAGYMKEG--EIG-VAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGS 309

Query: 683 KKTPGWSSI 691
           +  P W +I
Sbjct: 310 EMKPNWVTI 318


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/543 (40%), Positives = 343/543 (63%), Gaps = 2/543 (0%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           N+   N LIN + + G +  A++VFD+M+ER+V +WN++++   Q          F  M 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G  PD  TL S+    A L      + VH ++++ G+   ++++G+++  MY K G +
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEF-NLVVGSSLAHMYMKSGSL 140

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                V + + +++V++WNTLI G AQNG     ++++ MM+  + + P++ T VS++ +
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMK-MSGLRPDKITLVSVISS 199

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + +  L QG +IHA  IK      V V + L+ MY KCG ++D+M          SV W
Sbjct: 200 SAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLW 259

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +++I+ +G HG+G++A++ F QM  EG+  + +TF+SLL ACSH+GL  +G  +F +M E
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVE 319

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           ++G+KP L+HY C+VDL GR+G L  A   I++MP+  D  IW  LL ACRIH N ++  
Sbjct: 320 KYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMAT 379

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             ++ +  ++ ++   YVL+SNI+A+  +W+ V +VR+  RDR +KK PG S +EV N+V
Sbjct: 380 RTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRV 439

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F  G+++HP  E+I   L+ L  +MK  GYVPD + V  D + +EKE+ L +HSE+LA
Sbjct: 440 FQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLA 499

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAFG+++ PP SPI++ KNLR+C DCH   K IS I  REIIVRD++RFHHFK G CSCG
Sbjct: 500 IAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCG 559

Query: 818 DYW 820
           DYW
Sbjct: 560 DYW 562



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 185/360 (51%), Gaps = 4/360 (1%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L++ + + G  + A K+FD+M  R+  +WNAM+SG  Q       L +  EM   G   D
Sbjct: 29  LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T+ S+L  CA      +G  +H Y++K+G EFNL V ++L +MY K G +    +V  
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
            M  R+VV+WN++IA   Q+         +  M+ +G++PD +TLVS+ S  A+L     
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            + +H   ++ G     V + ++++ MY+K G +  +          D + W+++I  Y 
Sbjct: 209 GQQIHAEAIKAG-ANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYG 267

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFD 482
            +G   EA+ +F+ ME+   +  N  T++S+L A SH G   +G+     ++ K  L   
Sbjct: 268 FHGRGEEAVHLFEQMEQ-EGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPR 326

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +   TC+VD+ G+ G +D+A ++   +P  +  V W  ++S   IH   D A     ++L
Sbjct: 327 LEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEIL 386



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 189/394 (47%), Gaps = 9/394 (2%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           ++ + S   L+N +   GDL  +   FD +  RNV TWN+M+S  ++    +E     ++
Sbjct: 20  MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQF-EFNENGLFLFR 78

Query: 136 FTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                G  PD +T   VL+ C  L     GK++H  VLK G+E+++ V +SL HMY + G
Sbjct: 79  EMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSG 138

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
                 K+   M +R+  +WN +I+G  Q+G+    LD+ + M++ G+  D IT+ S++ 
Sbjct: 139 SLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVIS 198

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
             A    +  G  IH   +K G    + V ++LI+MY+K G +  +++        D V 
Sbjct: 199 SSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVL 258

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           W+S+IAAY        A   F  M+Q G+  + +T +SL    +              ++
Sbjct: 259 WSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMV 318

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEA 431
            +      +     VVD+  + G ++ A A+   +P++ DV+ W TL++    +  A  A
Sbjct: 319 EKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMA 378

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
               +  EE   +NP Q +   +L +  H  A R
Sbjct: 379 T---RTAEEILRLNP-QDSATYVLLSNIHASAKR 408



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 9/281 (3%)

Query: 47  EIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     + + C  L   +  K++HA ++  G    +   + L + Y   G L        
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV--- 160
            +  RNV  WN++I+   + G     +D  Y     SGLRPD  T   V+ +   L    
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLD-LYNMMKMSGLRPDKITLVSVISSSAELATLF 207

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++IH   +K G    V V +SL+ MY + G    + K   D    DS  W++MI+ Y 
Sbjct: 208 QGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYG 267

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNL 279
             G   EA+ + ++M  EG+  + +T  S+L  C+ +     G+    L + K+GL+  L
Sbjct: 268 FHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRL 327

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
                ++++  + G +  A  +   M +E DVV W ++++A
Sbjct: 328 EHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 150/330 (45%), Gaps = 42/330 (12%)

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN------- 442
           MY K+G I  A A F  +P+++++S N LI G+ Q+G    AI+VF  M E N       
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 443 -------EIN----------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
                  E N                P++ T  S+L   + + A   G ++HA V+K   
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
            F++ V + L  MY K G + +   +   +   + V WN +I+ +  +G  +  L+ +  
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNM 180

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M   G+RPD IT VS++++ +    + +GQ+  H    + G    +     ++ ++ + G
Sbjct: 181 MKMSGLRPDKITLVSVISSSAELATLFQGQQ-IHAEAIKAGANSAVAVLSSLISMYSKCG 239

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE-VDSENVGY--YVL 656
            L  +   + +    PD+ +W +++ A   HG  E        LFE ++ E +G      
Sbjct: 240 CLEDSMKALLDCE-HPDSVLWSSMIAAYGFHGRGEEAV----HLFEQMEQEGLGGNDVTF 294

Query: 657 MSNIYA---NVGKWEGVDEVRSLARDRGLK 683
           +S +YA   N  K +G+   + +    GLK
Sbjct: 295 LSLLYACSHNGLKEKGMGFFKLMVEKYGLK 324


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/676 (37%), Positives = 378/676 (55%), Gaps = 7/676 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K LHA ++ S     V+ +  LVN YA    L  ++  F+ I  ++V +WN +I+ 
Sbjct: 22  LQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80

Query: 120 YVRCG-RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
           Y + G   S  V   +Q        P+ +TF  V  A   LVD   G+  H   +K+   
Sbjct: 81  YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSC 140

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            DVFV +SL++MYC+ GL   ARK+FD MP R+S SW  MISGY     A EAL +   M
Sbjct: 141 RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLM 200

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           R E    +     S+L      + + +G  IH   VK+GL   + V N L+ MYAK G +
Sbjct: 201 RREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSL 260

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             AL+ F+   +++ ++W+++I  Y QS D   A   F++M  +GI+P   T V + +  
Sbjct: 261 DDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINAC 320

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           + L      + VH ++++ G F   + +  A+VDMYAK   I  A   F+ L   D++ W
Sbjct: 321 SDLGAAWEGKQVHDYLLKLG-FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLW 379

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            ++I GY QNG   +A+ ++  ME    I PN+ T  S+L A S + AL QG +IHAR +
Sbjct: 380 TSMIGGYVQNGENEDALSLYGRME-MEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           K     +V + + L  MY KCG + D   +F ++P    + WNA+IS    +G G +AL 
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALE 498

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M  EG +PD++TFV++L+ACSH GLV  G  YF MM +EFG+ P ++HY CMVD+ 
Sbjct: 499 LFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDIL 558

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
            RAG L  A  F ++  +     +W  +LGACR + N ELGA A ++L E+ S+    YV
Sbjct: 559 SRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYV 618

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+S+IY+ +G+WE V+ VR + + RG+ K PG S IE+ + V +F   ++ HP+   I+ 
Sbjct: 619 LLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHV 678

Query: 716 ELRNLTAKMKSLGYVP 731
           ELR L+ +MK  GY P
Sbjct: 679 ELRQLSKQMKDEGYEP 694



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P+  ++ + L  Y+H  +L++G  +HA++IK+     V++A  LV++Y KC R+ +A  +
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFV 62

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKA--LNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           F ++     V WN II+ +  HG    +  +  F++M  E   P+  TF  + TA S + 
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS-TL 121

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           + + G R  H +  +      +     +++++ +AG    A      MP R   S W  +
Sbjct: 122 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVS-WATM 180

Query: 624 LGACRIHGNMELGAVASD--RLFEVDSENVGYYVLMSNIYA 662
           +     + + +L A A    RL   + E    +V  S + A
Sbjct: 181 ISG---YASQKLAAEALGLFRLMRREEEGENEFVFTSVLSA 218



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 4/116 (3%)

Query: 47  EIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E+    + ++C+ L      K++HA  V  G    V   + L   YA  G L      F 
Sbjct: 411 ELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFR 470

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
            +  R+V +WN+MIS   + G   EA++ F +  L  G +PD+ TF  +L AC ++
Sbjct: 471 RMPARDVISWNAMISGLSQNGCGKEALELFEEMQL-EGTKPDYVTFVNILSACSHM 525


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/602 (39%), Positives = 362/602 (60%), Gaps = 44/602 (7%)

Query: 256 RSDNILSGLLIHLYIVKHGLEFNL---FVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           +S ++   L IH  I++H L  +     ++  L   YA  G +RH+L +F Q ++ D+  
Sbjct: 38  KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC--RNSRSVHGF 370
           + + I     +     A   +  +  + I P+  T  SL      L  C  ++ + +H  
Sbjct: 98  FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSL------LKSCSTKSGKLIHTH 151

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-------------------- 410
           +++ G  + D  +   +VD+YAK G + SA  VF+ +P +                    
Sbjct: 152 VLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210

Query: 411 -----------DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
                      D++SWN +I GYAQ+G  ++A+ +FQ +    +  P++ T V+ L A S
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +GAL  G  IH  V  + +  +V V T L+DMY KCG +++A+ +F   PR   V WNA
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330

Query: 520 IISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +I+ + +HG    AL  F +M    G++P  ITF+  L AC+H+GLV+EG R F  M +E
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GIKP ++HYGC+V L GRAG L  A+  I+NM +  D+ +W ++LG+C++HG+  LG  
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            ++ L  ++ +N G YVL+SNIYA+VG +EGV +VR+L +++G+ K PG S+IE+ NKV 
Sbjct: 451 IAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+R H K ++IY  LR ++ ++KS GYVP+ + VLQD+EE EKE  L  HSERLAI
Sbjct: 511 EFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAI 570

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           A+G+IS+ P SP++IFKNLRVC DCH  TK IS+IT R+I++RD NRFHHF DG CSCGD
Sbjct: 571 AYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGD 630

Query: 819 YW 820
           +W
Sbjct: 631 FW 632



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 39/323 (12%)

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           ++ +  T +S+L  C+      SG LIH +++K GL  + +V+  L+++YAK G +  A 
Sbjct: 126 INPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181

Query: 300 RVFDQ-------------------------------MMERDVVSWNSIIAAYEQSNDPIT 328
           +VFD+                               M ERD+VSWN +I  Y Q   P  
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241

Query: 329 AHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
           A   F  +   G  +PD +T+V+  S  +Q+      R +H F+ +      +V +   +
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGL 300

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMY+K G +  A  VF   P KD+++WN +I GYA +G + +A+ +F  M+    + P 
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
             T++  L A +H G + +GI+I   + +   +   +    CLV + G+ G++  A    
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420

Query: 507 YQVPR-SSSVPWNAIISCHGIHG 528
             +   + SV W++++    +HG
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHG 443



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 35/299 (11%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL   YA+ G +  S   F      +++ + + I+     G   +A   + Q  L+S + 
Sbjct: 69  KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL-LSSEIN 127

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           P+ +TF  +LK+C +   GK IH  VLK G   D +VA  L+ +Y + G    A+K+FD 
Sbjct: 128 PNEFTFSSLLKSC-STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR 186

Query: 204 MPVR-------------------------------DSGSWNAMISGYCQSGNAVEALDIL 232
           MP R                               D  SWN MI GY Q G   +AL + 
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246

Query: 233 DEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
            ++  EG    D ITV + L  C++   + +G  IH+++    +  N+ V   LI+MY+K
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLV 349
            G +  A+ VF+    +D+V+WN++IA Y        A   F  MQ   G+QP  +T +
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 146/314 (46%), Gaps = 17/314 (5%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +++ SST ++  YA  G++  +R  FD +  R++ +WN MI  Y + G  ++A+  F + 
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249

Query: 137 TLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
                 +PD  T    L AC     L  G+ IH  V       +V V   L+ MY + G 
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILP 252
              A  +F+D P +D  +WNAMI+GY   G + +AL + +EM+ + G+    IT    L 
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369

Query: 253 VCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            CA +  +  G+ I   +  ++G++  +     L+++  + G ++ A      M M+ D 
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

Query: 311 VSWNSIIAAYEQSND-----PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
           V W+S++ + +   D      I  +     ++ +GI       V L++I A + D     
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGI------YVLLSNIYASVGDYEGVA 483

Query: 366 SVHGFIMRRGWFME 379
            V   +  +G   E
Sbjct: 484 KVRNLMKEKGIVKE 497


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/626 (38%), Positives = 369/626 (58%), Gaps = 52/626 (8%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQ-SGNAVEALDILDEMRLEGVSMDPITVA-SILPVC 254
           AR +F+ M VR + +WN M+SGY + +G   EA ++ D++       +P +V+ +I+ VC
Sbjct: 92  ARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP------EPDSVSYNIMLVC 145

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
                         Y+  +G+E                     AL  F++M  +D+ SWN
Sbjct: 146 --------------YLRSYGVE--------------------AALAFFNKMPVKDIASWN 171

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++I+ + Q+     A   F+ M +     + ++  ++ S   +  D   +  ++     +
Sbjct: 172 TLISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELY-----K 222

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
              M+ V++  A++  Y K G +  A  +F+ + VK++++WN++I GY +N  A + ++V
Sbjct: 223 NVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKV 282

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F+ M E + + PN  +  S+L   S++ AL  G ++H  V K+ L  D    T L+ MY 
Sbjct: 283 FKTMIE-SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYC 341

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           KCG +D A  LF ++PR   + WNA+IS +  HG G KAL+ F +M +  ++PD ITFV+
Sbjct: 342 KCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVA 401

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           ++ AC+H+G V  G +YF  M++EFGI+    HY C++DL GRAG L  A + I+ MP +
Sbjct: 402 VILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFK 461

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P A+I+G LLGACRIH N++L   A+  L  +D  +   YV ++NIYA   KW+ V +VR
Sbjct: 462 PHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVR 521

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
            + ++  + K PG+S IE+ +    F + +R HP+   I+ +L  L  KMK  GYVPD  
Sbjct: 522 KMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLE 581

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
           F L DVEE+ KE +L  HSE+LAIAFG++ + P +PI++FKNLRVCGDCH   KFIS I 
Sbjct: 582 FALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIE 641

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
           +REIIVRD+ RFHHF++G CSCGDYW
Sbjct: 642 KREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 160/319 (50%), Gaps = 26/319 (8%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F+ +  +++ +WN++IS + + G++ +A D F      +G+     ++  ++       D
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGV-----SWSAMISGYVEHGD 213

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            +        +G +  V V  ++L  Y +FG   +A ++F  M V++  +WN+MI+GY +
Sbjct: 214 LEAAEELYKNVGMK-SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +  A + L +   M    V  +P++++S+L  C+    +  G  +H  + K  L  +   
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
             +LI+MY K G +  A ++F +M  +DV+SWN++I+ Y Q      A   F  M+   +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTM 392

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFI---------MRRGWFMEDVIIG-NAVVDMY 391
           +PD +T V++  I+A    C ++    GF+         M++ + +E   +    V+D+ 
Sbjct: 393 KPDWITFVAV--ILA----CNHA----GFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLL 442

Query: 392 AKLGIINSACAVFEGLPVK 410
            + G ++ A ++ + +P K
Sbjct: 443 GRAGRLDEAVSLIKEMPFK 461



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/306 (19%), Positives = 126/306 (41%), Gaps = 56/306 (18%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-NGLASEAIEVFQMM 438
           DV+  N  +  + +   + SA  VFE + V+  ++WNT+++GY +  G   EA E+F  +
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKI 131

Query: 439 EECNEINPN--------------------------QGTYVSILPAYSHVGALRQGIKIHA 472
            E + ++ N                            ++ +++  ++  G +++   + +
Sbjct: 132 PEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFS 191

Query: 473 ---------------------------RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
                                       + KN     V V T ++  Y K G+++ A  +
Sbjct: 192 VMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F ++   + V WN++I+ +  + + +  L  F+ M++  VRP+ ++  S+L  CS+   +
Sbjct: 252 FQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSAL 311

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
             G R  H +  +  +         ++ ++ + G L  A      MP R D   W A++ 
Sbjct: 312 PLG-RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNAMIS 369

Query: 626 ACRIHG 631
               HG
Sbjct: 370 GYAQHG 375


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 388/744 (52%), Gaps = 102/744 (13%)

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           S   ++  YAN G L+ +R  F     R+  TW+S+IS Y R G   EA++ F++     
Sbjct: 74  SWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQY-E 132

Query: 141 GLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G RP+ +T+  VL+ C   V    GK+IH   +K  F+ + FV   L+ MY +      A
Sbjct: 133 GERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEA 192

Query: 198 RKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
             LF+  P  R+   W AM++GY Q+G+  +A++   +MR EG+  +  T  SIL  C  
Sbjct: 193 EYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGS 252

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                 G  +H  IV+ G   N+FV + L++MY+K G + +A R+ + M   D VSWNS+
Sbjct: 253 ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSM 312

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I    +      A   F  M    ++ D  T  SL                         
Sbjct: 313 IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL------------------------- 347

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
                 + NA+VDMYAK G  + A  VFE +  KDVISW +L+TG   NG   EA+ +F 
Sbjct: 348 ------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFC 401

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     I+P+Q    ++L A                           +   LV MY KC
Sbjct: 402 EMRIMG-IHPDQIVIAAVLSA---------------------------LDNSLVSMYAKC 433

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G I+DA  +F  +     + W A+I  +  +G+                           
Sbjct: 434 GCIEDANKVFDSMEIQDVITWTALIVGYAQNGR--------------------------- 466

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
                      G+ YF  M+E +GIKP  +HY CM+DL GR+G L  A   +  M V+PD
Sbjct: 467 -----------GRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPD 515

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A++W ALL ACR+HGN+ELG  A++ LFE++ +N   YVL+SN+Y+  GKWE   + R L
Sbjct: 516 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 575

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            + RG+ K PG S IE+++KV  F + +R+HP+  +IY ++  +   +K  GYVPD +F 
Sbjct: 576 MKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFA 635

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L D++E+ KE  L  HSE+LA+AFG+++ PP +PI+IFKNLR+CGDCH   K++S +  R
Sbjct: 636 LHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHR 695

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
            +I+RDSN FHHF++G CSC DYW
Sbjct: 696 HVILRDSNCFHHFREGACSCSDYW 719



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 227/525 (43%), Gaps = 109/525 (20%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-SYRNVYTWNSMIS 118
           L   K++HA  + +      F  T LV+ YA    +  + + F+     RN   W +M++
Sbjct: 154 LEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVT 213

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            Y + G   +A++CF       G+  + +TFP +L AC ++     G ++H  +++ GF 
Sbjct: 214 GYSQNGDGHKAIECFRDMR-GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFG 272

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            +VFV ++L+ MY + G  + AR++ + M V D  SWN+MI G  + G   EAL +   M
Sbjct: 273 ANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIM 332

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
            L  + +D  T  S+                              V+N L++MYAK G  
Sbjct: 333 HLRHMKIDEFTYPSL------------------------------VNNALVDMYAKRGYF 362

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
            +A  VF++M ++DV+SW S++     +     A   F  M+  GI PD + + ++ S  
Sbjct: 363 DYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS-- 420

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
                                      + N++V MYAK G I  A  VF+ + ++DVI+W
Sbjct: 421 --------------------------ALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITW 454

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
             LI GYAQNG      + FQ MEE   I P    Y                        
Sbjct: 455 TALIVGYAQNGRGR---DYFQSMEEVYGIKPGPEHY------------------------ 487

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ---GD 531
                       C++D+ G+ G++ +A  L  Q+  +  +  W A+++   +HG    G+
Sbjct: 488 -----------ACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGE 536

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           +A N   ++  +   P    +V L    S +G   E  +   +M+
Sbjct: 537 RAANNLFELEPKNAVP----YVLLSNLYSAAGKWEEAAKTRRLMK 577



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 171/390 (43%), Gaps = 63/390 (16%)

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI------------------------- 419
           N V+   +K G ++ A  +F+ +P +D  SWNT+I                         
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 420 ------TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
                 +GY + G   EA+E+F  M+   E  PNQ T+ S+L   S    L +G +IHA 
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGE-RPNQFTWGSVLRVCSMYVLLEKGKQIHAH 163

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDK 532
            IK     + FV T LVDMY KC  I +A  LF   P + + V W A+++ +  +G G K
Sbjct: 164 AIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHK 223

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCM 591
           A+  FR M  EG+  +  TF S+LTAC        G Q +  +++  FG    +     +
Sbjct: 224 AIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVG--SAL 281

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG----NMELGAVASDRLFEVD 647
           VD++ + G L  A   ++ M V  D   W +++  C   G     + L  +   R  ++D
Sbjct: 282 VDMYSKCGDLSNARRMLETMEV-DDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKID 340

Query: 648 SENVGYYVLMSN----IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
                Y  L++N    +YA  G ++   +V     D   K    W+S+          TG
Sbjct: 341 --EFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMTD---KDVISWTSL---------VTG 386

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
              +  YE    E   L  +M+ +G  PD+
Sbjct: 387 CVHNGSYE----EALRLFCEMRIMGIHPDQ 412


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/632 (38%), Positives = 363/632 (57%), Gaps = 64/632 (10%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQ-SGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           AR +F+ M VR + +WN M+SGY + +G   EA ++ D++       +P +V        
Sbjct: 92  ARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIP------EPDSV-------- 137

Query: 256 RSDNILSGLLIHLYIVKHGLEF-------NLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
            S NI+    +  Y VK  L F       ++   N LI+ +A+ G M+ A  +F  M E+
Sbjct: 138 -SYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK 196

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           + VSW+++I+ Y +  D   A   +  +                                
Sbjct: 197 NGVSWSAMISGYVEHGDLEAAEELYKNVG------------------------------- 225

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
                    M+ V++  A++  Y K G +  A  +F+ + VK++++WN++I GY +N  A
Sbjct: 226 ---------MKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRA 276

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            + ++VF+ M E + + PN  +  S+L   S++ AL  G ++H  V K+ L  D    T 
Sbjct: 277 EDGLKVFKTMIE-SRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTS 335

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           L+ MY KCG +D A  LF ++PR   + WNA+IS +  HG G KAL+ F +M +  ++PD
Sbjct: 336 LISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPD 395

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            ITFV+++ AC+H+G V  G +YF  M++EFGI+    HY C++DL GRAG L  A + I
Sbjct: 396 WITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLI 455

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           + MP  P A+I+G LLGACRIH N++L   A+  L  +D  +   YV ++NIYA   KW+
Sbjct: 456 KEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWD 515

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V +VR + ++  + K PG+S IE+ +    F + +R HP+   I+ +L  L  KMK  G
Sbjct: 516 QVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAG 575

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVPD  F L DVEE+ KE +L  HSE+LAIAFG++ + P +PI++FKNLRVCGDCH   K
Sbjct: 576 YVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIK 635

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FIS I +REIIVRD+ RFHHF++G CSCGDYW
Sbjct: 636 FISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 155/350 (44%), Gaps = 52/350 (14%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT-AHGFFTTMQQAGI 341
           N  I  + +   +  A  VF++M  R  V+WN++++ Y +    +  AH  F  + +   
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE--- 133

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
            PD ++                                     N ++  Y +   + +A 
Sbjct: 134 -PDSVSY------------------------------------NIMLVCYLRSYGVKAAL 156

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
           A F  +PVKD+ SWNTLI+G+AQNG   +A ++F +M E N +     ++ +++  Y   
Sbjct: 157 AFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGV-----SWSAMISGYVEH 211

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G L    +++    KN     V V T ++  Y K G+++ A  +F ++   + V WN++I
Sbjct: 212 GDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMI 267

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +  + + +  L  F+ M++  VRP+ ++  S+L  CS+   +  G R  H +  +  +
Sbjct: 268 AGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLG-RQMHQLVSKSPL 326

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                    ++ ++ + G L  A      MP R D   W A++     HG
Sbjct: 327 SKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVITWNAMISGYAQHG 375



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 5/234 (2%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K+V   T ++  Y   G +  +   F  ++ +N+ TWNSMI+ YV   R  + +  F +
Sbjct: 226 MKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVF-K 284

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
             + S +RP+  +   VL  C NL     G+++H  V K     D     SL+ MYC+ G
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCG 344

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + A KLF +MP +D  +WNAMISGY Q G   +AL + D+MR   +  D IT  +++ 
Sbjct: 345 DLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVIL 404

Query: 253 VCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            C  +  +  G+     + K  G+E        +I++  + G +  A+ +  +M
Sbjct: 405 ACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 159/317 (50%), Gaps = 26/317 (8%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
           F+ +  +++ +WN++IS + + G++ +A D F      +G+     ++  ++       D
Sbjct: 159 FNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGV-----SWSAMISGYVEHGD 213

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            +        +G +  V V  ++L  Y +FG   +A ++F  M V++  +WN+MI+GY +
Sbjct: 214 LEAAEELYKNVGMK-SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE 272

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +  A + L +   M    V  +P++++S+L  C+    +  G  +H  + K  L  +   
Sbjct: 273 NCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
             +LI+MY K G +  A ++F +M  +DV++WN++I+ Y Q      A   F  M+   +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTM 392

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFI---------MRRGWFMEDVIIG-NAVVDMY 391
           +PD +T V++  I+A    C ++    GF+         M++ + +E   +    V+D+ 
Sbjct: 393 KPDWITFVAV--ILA----CNHA----GFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLL 442

Query: 392 AKLGIINSACAVFEGLP 408
            + G ++ A ++ + +P
Sbjct: 443 GRAGRLDEAVSLIKEMP 459


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/659 (35%), Positives = 364/659 (55%), Gaps = 68/659 (10%)

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           + +   M  +G+  D   + +++  CA    + +G  +H + +  GL  +  V ++L++M
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 289 YAKFGMMRHALRVFDQM-----------------------------------MERDVVSW 313
           Y +F  ++ A  VFD++                                   +E ++VSW
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           N +I+ + +S   + A   F  M   G++PD  ++ S+   V  L+       +H ++++
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
           +G    D  + +A++DMY K    +    VF  +   DV + N L+TG ++NGL   A+E
Sbjct: 239 QG-LGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297

Query: 434 VFQ--------------MMEECNE------------------INPNQGTYVSILPAYSHV 461
           VF+              M+  C++                  + PN  T   +LPA  ++
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL  G   H   ++N +  DV+V + L+DMY KCGR+  +   F  +P  + V WN+++
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + + +HG+  +A+N F  M   G +PDH++F  +L+AC+  GL  EG  YF  M    G+
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +  ++HY CMV L GR+G L  A+  I+ MP  PD+ +WGALL +CR+H  ++LG +A+ 
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAK 537

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           R+FE++  N G Y+L+SNIYA+   W  VD VR + R RGLKK PG+S IE+ NKV +  
Sbjct: 538 RVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLL 597

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G+ +HP+  +I ++L  LT +MK  GYVP   FVLQDVEE +KE IL  HSE+LA+  G
Sbjct: 598 AGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLG 657

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++ P  P+Q+ KNLR+C DCH   KFIS   +REI VRD+NRFH FK G+CSCGDYW
Sbjct: 658 LLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 233/471 (49%), Gaps = 75/471 (15%)

Query: 134 YQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           + + LT G+ PD    P V+K C     L  GK++HC  L  G   D  V +SLLHMY +
Sbjct: 62  FSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQ 121

Query: 191 FGLANVARKLFDDMP-----------------------------VRDSG------SWNAM 215
           F     AR +FD +P                              RD G      SWN M
Sbjct: 122 FDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGM 181

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           ISG+ +SG+ ++A+ +   M LEG+  D  +V+S+LP     D  L G+ IH Y++K GL
Sbjct: 182 ISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGL 241

Query: 276 EFNLFVSNNLINMYAKF-------------------------------GMMRHALRVFDQ 304
             + FV + LI+MY K                                G++ +AL VF Q
Sbjct: 242 GPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQ 301

Query: 305 M--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
              M+ +VVSW S+IA+  Q+   + A   F  MQ  G++P+ +T+  L      +    
Sbjct: 302 FKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALL 361

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           + ++ H F +R G F  DV +G+A++DMYAK G + ++   F+ +P ++++SWN+L+ GY
Sbjct: 362 HGKAAHCFSLRNGIF-NDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGY 420

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCF 481
           A +G   EAI +F++M+ C +  P+  ++  +L A +  G   +G      + +N  +  
Sbjct: 421 AMHGKTFEAINIFELMQRCGQ-KPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEA 479

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
            +   +C+V + G+ GR+++A ++  Q+P    S  W A++S   +H + D
Sbjct: 480 RMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVD 530



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 191/445 (42%), Gaps = 93/445 (20%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L   K++H   +VSG        + L++ Y     L  +R+ FD +    V T +++I
Sbjct: 88  SALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALI 147

Query: 118 SVYVRCGRLSEAVDCFYQ-------FTLTS---------------------------GLR 143
           S + R GR+ E  + FYQ         L S                           GL+
Sbjct: 148 SRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLK 207

Query: 144 PDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD  +   VL A  +L   + G +IHC V+K G   D FV ++L+ MY +   A+    +
Sbjct: 208 PDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGV 267

Query: 201 FDDMPVRDSG---------------------------------SWNAMISGYCQSGNAVE 227
           F++M   D G                                 SW +MI+   Q+G  +E
Sbjct: 268 FNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDME 327

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL++  EM++EGV  + +T+  +LP C     +L G   H + +++G+  +++V + LI+
Sbjct: 328 ALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALID 387

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK G M  +   FD M  R++VSWNS++A Y        A   F  MQ+ G +PD ++
Sbjct: 388 MYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVS 447

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AVVDMYAKLGI 396
              + S   Q           G +   GWF  D +  N            +V +  + G 
Sbjct: 448 FTCVLSACTQ-----------GGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGR 496

Query: 397 INSACAVFEGLPVK-DVISWNTLIT 420
           +  A A+ + +P + D   W  L++
Sbjct: 497 LEEAYAMIKQMPFEPDSCVWGALLS 521



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 6/216 (2%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKI 165
           NV +W SMI+   + G+  EA++ F +  +  G++P+  T P +L AC N   L+ GK  
Sbjct: 308 NVVSWTSMIASCSQNGKDMEALELFREMQI-EGVKPNSVTIPCLLPACGNIAALLHGKAA 366

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           HC  L+ G   DV+V ++L+ MY + G    +R  FD MP R+  SWN++++GY   G  
Sbjct: 367 HCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKT 426

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNN 284
            EA++I + M+  G   D ++   +L  C +      G      + + HG+E  +   + 
Sbjct: 427 FEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSC 486

Query: 285 LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           ++ +  + G +  A  +  QM  E D   W +++++
Sbjct: 487 MVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSS 522



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 40/224 (17%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H K  H   + +G    V+  + L++ YA  G +  SR  FD +  RN+ +WNS+++ 
Sbjct: 360 LLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAG 419

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC-----------------RNL-VD 161
           Y   G+  EA++ F +     G +PD  +F  VL AC                 RN  V+
Sbjct: 420 YAMHGKTFEAINIF-ELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVE 478

Query: 162 GKKIH--CSVLKLG----------------FEWDVFVAASLL---HMYCRFGLANVARKL 200
            +  H  C V  LG                FE D  V  +LL    ++ R  L  +A K 
Sbjct: 479 ARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKR 538

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
             ++  R+ G++  + + Y      VE   + D MR  G+  +P
Sbjct: 539 VFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNP 582


>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
          Length = 668

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/564 (40%), Positives = 366/564 (64%), Gaps = 8/564 (1%)

Query: 263 GLLIHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           G  +HL  ++ GL   + + ++ L++MY        A R FD++   + V   ++ +   
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 322 QSNDPITAHGFFTTMQQAGIQP--DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
           ++N   T    F +M  +G     D    +   S  A++ D   +  +H  + + G    
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIG-LDG 225

Query: 380 DVIIGNAVVDMYAKLG--IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-Q 436
              + N ++D YAK G   + +A  +F+ +  +DV+SWNT+I  YAQNGL++EA+ ++ +
Sbjct: 226 QTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSK 284

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
           M+    ++  N  T  ++L A +H GA++ G +IH +V++  L  +V+V T +VDMY KC
Sbjct: 285 MLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKC 344

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G+++ A   F ++   + + W+A+I+ +G+HG G +AL+ F  M   G++P++ITF+++L
Sbjct: 345 GKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVL 404

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSH+GL+SEG+ +++ M+ EFGI+P ++HYGCMVDL GRAG L  A+  I+ M V+PD
Sbjct: 405 AACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 464

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A++WGALL ACRI+ N+EL  + ++RLFE+D+ N GYYVL+SNIYA  G W+ V+ +R L
Sbjct: 465 AALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVL 524

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            + RG++K PG+SS+E+  K  +FY G+++HP+Y++IY  L  L  ++   GYVP+   V
Sbjct: 525 VKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSV 584

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L D++ +E+E +L  HSE+LA+AF +++S   S I + KNLRVC DCH   K I+++T R
Sbjct: 585 LHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGR 644

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           EII+RD  RFHHFKDG+CSCGDYW
Sbjct: 645 EIIIRDLKRFHHFKDGLCSCGDYW 668



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 193/372 (51%), Gaps = 16/372 (4%)

Query: 162 GKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+++H   L+ G F  D + A++LLHMY        AR+ FD++P  +     AM SG  
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166

Query: 221 QSGNAVEALDILDEMRLEGVS--MDPITVASILPVCAR-SDNILSGLLIHLYIVKHGLEF 277
           ++      L I   M   G +  +D       L   AR  D  ++G  IH  + K GL+ 
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITG-GIHALVSKIGLDG 225

Query: 278 NLFVSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
              V+N +I+ YAK G   +  A ++FD MM+RDVVSWN++IA Y Q+     A G ++ 
Sbjct: 226 QTGVANTIIDAYAKGGGHDLGAARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSK 284

Query: 336 MQQAG--IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           M   G  ++ + +TL ++    A     +  + +H  ++R G   ++V +G +VVDMY+K
Sbjct: 285 MLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMG-LEDNVYVGTSVVDMYSK 343

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G +  A   F+ +  K+++SW+ +I GY  +G   EA+ VF  M +   + PN  T+++
Sbjct: 344 CGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG-LKPNYITFIT 402

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP- 510
           +L A SH G L +G +     +K     +  V    C+VD+ G+ G +D+A  L  ++  
Sbjct: 403 VLAACSHAGLLSEG-RYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKV 461

Query: 511 RSSSVPWNAIIS 522
           +  +  W A++S
Sbjct: 462 KPDAALWGALLS 473



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 138/262 (52%), Gaps = 9/262 (3%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLG--DLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +HAL+   G       +  +++ YA  G  DL  +R  FD +  R+V +WN+MI++Y + 
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQN 272

Query: 124 GRLSEAVDCFYQFTLTSG-LRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
           G  +EA+  + +  +  G +R +  T   VL AC +   +  GK+IH  V+++G E +V+
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  S++ MY + G   +A K F  +  ++  SW+AMI+GY   G   EAL +  +MR  G
Sbjct: 333 VGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG 392

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +  + IT  ++L  C+ +  +  G   +  +  + G+E  +     ++++  + G +  A
Sbjct: 393 LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEA 452

Query: 299 LRVFDQM-MERDVVSWNSIIAA 319
             +  +M ++ D   W ++++A
Sbjct: 453 YGLIKEMKVKPDAALWGALLSA 474



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 7/180 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           KR+H  +V  G    V+  T +V+ Y+  G +  +   F  I  +N+ +W++MI+ Y   
Sbjct: 316 KRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMH 375

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSV-LKLGFEWDVF 179
           G   EA+  F      SGL+P++ TF  VL AC +   L +G+  + ++  + G E  V 
Sbjct: 376 GYGQEALHVFTDMR-KSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVE 434

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
               ++ +  R G  + A  L  +M V+ D+  W A++S  C+    VE   I  E   E
Sbjct: 435 HYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSA-CRIYKNVELAKICAERLFE 493


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/608 (37%), Positives = 373/608 (61%), Gaps = 17/608 (2%)

Query: 220 CQSGNAVEAL---DILD-EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           C SG   EAL    IL  E++ EG         +IL  C     I  G  +H +++K   
Sbjct: 69  CSSGQLKEALLQMAILGREVKFEGYD-------TILNECVSQRAIREGQRVHTHMIKTCY 121

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             ++++   LI +Y K   +  A  +FD+M +++VVSW ++I+AY Q      A   F  
Sbjct: 122 LPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVE 181

Query: 336 MQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           M ++  +P+  T  + LTS    L      R +H   ++R  +   + +G++++DMYAK 
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLG-FETGRQIHSIAIKRN-YESHMFVGSSLLDMYAKS 239

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  A  VF  LP +DV++   +I+GYAQ GL  EA+++F+ ++    +N N  TY S+
Sbjct: 240 GRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQ-IEGMNSNSVTYASV 298

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S + AL  G ++H+ V+++     V +   L+DMY KCG +  A  +F  +P  + 
Sbjct: 299 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 358

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEG-QRYF 572
           + WNA++  +  HG   + L  F+ M +E  V+PD IT++++L+ CSH  L   G + ++
Sbjct: 359 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFY 418

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           +M+  + GI+P + HYGC+VDL GRAG +  A +FI+ MP  P A+IWG+LLG+CR+H +
Sbjct: 419 NMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSD 478

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           +E+G +   +L E++ EN G YV++SN+YA+ GKWE +  +R L +++ + K PG S +E
Sbjct: 479 VEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVE 538

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
           ++  V  F+  + THP+ E++  +++ L+ K K  GYVPD S VL DV+E++KE +L  H
Sbjct: 539 LDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGH 598

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SE+LA+AFG+I++P  + I++ KNLR+C DCH++ KF+S++  R +I+RD NRFH+   G
Sbjct: 599 SEKLALAFGLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGG 658

Query: 813 ICSCGDYW 820
           +CSCGDYW
Sbjct: 659 VCSCGDYW 666



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 259/489 (52%), Gaps = 19/489 (3%)

Query: 98  SRHTFD-HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
           SR+TF   IS+       ++ S     G+L EA+    Q  +  G    F  +  +L  C
Sbjct: 49  SRYTFSRQISFSPSPNLKTLCS----SGQLKEAL---LQMAIL-GREVKFEGYDTILNEC 100

Query: 157 ---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
              R + +G+++H  ++K  +   V++   L+ +Y +      AR++FD+MP ++  SW 
Sbjct: 101 VSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWT 160

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           AMIS Y Q G A EAL++  EM       +  T A+IL  C  S    +G  IH   +K 
Sbjct: 161 AMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKR 220

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
             E ++FV ++L++MYAK G +  A  VF  + ERDVV+  +II+ Y Q      A   F
Sbjct: 221 NYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLF 280

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             +Q  G+  + +T  S+ + ++ L    + + VH  ++R G +   V++ N+++DMY+K
Sbjct: 281 RQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY-SYVVLLNSLIDMYSK 339

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G +  A  +F+ +P +  ISWN ++ GY+++G+A E +E+F++M E N++ P+  TY++
Sbjct: 340 CGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLA 399

Query: 454 ILPAYSHVGALRQGIKIHARVI--KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP- 510
           +L   SH      G++I   ++  K+ +  D+    C+VD+ G+ GR+++A     ++P 
Sbjct: 400 VLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPF 459

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQ 569
             ++  W +++    +H   +  +   +++L+  + P++   +V L    + +G   + +
Sbjct: 460 VPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILSNLYASAGKWEDMR 517

Query: 570 RYFHMMQEE 578
               +MQE+
Sbjct: 518 NIRDLMQEK 526



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 19/431 (4%)

Query: 46  REIDF---DDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR 99
           RE+ F   D +   C     ++   R+H  ++ +  + +V+  T+L+  Y     L  +R
Sbjct: 86  REVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAR 145

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
             FD +  +NV +W +MIS Y + G   EA++ F +  L S   P+ +TF  +L +C   
Sbjct: 146 EMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEM-LRSDTEPNHFTFATILTSCYGS 204

Query: 160 V---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           +    G++IH   +K  +E  +FV +SLL MY + G    A  +F  +P RD  +  A+I
Sbjct: 205 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 264

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           SGY Q G   EAL +  ++++EG++ + +T AS+L   +    +  G  +H ++++ G  
Sbjct: 265 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 324

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + + N+LI+MY+K G + +A R+FD M ER  +SWN+++  Y +          F  M
Sbjct: 325 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLM 384

Query: 337 QQAG-IQPDLLTLVSLTSIVA--QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           ++   ++PD +T +++ S  +  QL D       +  +  +     D+     VVD+  +
Sbjct: 385 REENKVKPDSITYLAVLSGCSHGQLED-MGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGR 443

Query: 394 LGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTY 451
            G +  A    + +P V     W +L+     +      I V Q +    E+ P N G Y
Sbjct: 444 AGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL---ELEPENAGNY 500

Query: 452 VSILPAYSHVG 462
           V +   Y+  G
Sbjct: 501 VILSNLYASAG 511


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/562 (40%), Positives = 339/562 (60%), Gaps = 2/562 (0%)

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
           N+     +H  I  +G   NL V+N L+ MY + G +  A  +FD M +R   SW+ I+ 
Sbjct: 65  NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVG 124

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y +  +  +    F  + ++G   D  +   +      L D +  R +H   ++ G   
Sbjct: 125 GYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDY 184

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
              +    +VDMYA+  ++  A  +F  +  +D+ +W  +I   A++G+  E++  F  M
Sbjct: 185 GHFVCAT-LVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRM 243

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                I P++   V+++ A + +GA+ +   IHA +       DV + T ++DMY KCG 
Sbjct: 244 RN-QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGS 302

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           ++ A  +F ++   + + W+A+I+ +G HGQG+KAL  F  ML  G+ P+ ITFVSLL A
Sbjct: 303 VESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYA 362

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSH+GL+ EGQR+F  M +E+G+ P +KHY CMVDL GRAG L  A   I+ MPV  D  
Sbjct: 363 CSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV 422

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           +WGALLGACRIH +++L    +  L ++ S+  G+YVL+SNIYAN GKWE + + R L  
Sbjct: 423 LWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMT 482

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
             GL+K PG + IEV  K+  F  G++THP+  +IY  L+ L  K++  GY PD + VL 
Sbjct: 483 KGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLY 542

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           DV+E+ K+ +L SHSE+LAIAFG++  P   PI+I KNLRVCGDCH + KF+S I ++ I
Sbjct: 543 DVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTI 602

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           IVRD+ RFHHFK+G+CSC DYW
Sbjct: 603 IVRDAKRFHHFKEGVCSCRDYW 624



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 231/435 (53%), Gaps = 5/435 (1%)

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH 186
           +E   C  +   +  L  D   F   L +CRNL   +++H  +   G   ++ VA  LL+
Sbjct: 34  NEPTPCSQESECSHVLHYDTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLY 93

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY   G    A++LFD M  R   SW+ ++ GY + GN      +  E+   G  +D  +
Sbjct: 94  MYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYS 153

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
              ++  C    ++  G LIH   +K GL++  FV   L++MYA+  ++  A ++F +M 
Sbjct: 154 APVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMW 213

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           +RD+ +W  +I A  +S  P+ +  FF  M+  GI PD + LV++    A+L     +++
Sbjct: 214 KRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKA 273

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H +I   G+ + DVI+G A++DMYAK G + SA  +F+ + V++VI+W+ +I  Y  +G
Sbjct: 274 IHAYINGTGYSL-DVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHG 332

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFV 485
              +A+E+F MM   + I PN+ T+VS+L A SH G + +G +  + +     +  DV  
Sbjct: 333 QGEKALELFPMMLR-SGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKH 391

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD-E 543
            TC+VD+ G+ GR+D+A+ +   +P     V W A++    IH   D A    R +L  +
Sbjct: 392 YTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQ 451

Query: 544 GVRPDHITFVSLLTA 558
             +P H   +S + A
Sbjct: 452 SQKPGHYVLLSNIYA 466



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 24/414 (5%)

Query: 27  FSAAANSLQISPDCLENE----SREID-----------FDDLFQSCTKLHHVKRLHALLV 71
           FS+A+ S Q   +C  NE    S+E +           F     SC  L  V+++HA + 
Sbjct: 18  FSSASLSWQFDVNCNSNEPTPCSQESECSHVLHYDTKRFRSSLLSCRNLFQVRQVHAQIA 77

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
            +G  + +  + KL+  Y   G L  ++  FD +S R+ Y+W+ ++  Y + G       
Sbjct: 78  TNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNF---FS 134

Query: 132 CFYQFT--LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLH 186
           CF+ F   L SG   D Y+ P V++ACR+L D   G+ IHC  LK G ++  FV A+L+ 
Sbjct: 135 CFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVD 194

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY R  +   A ++F  M  RD  +W  MI    +SG  VE+L   D MR +G+  D + 
Sbjct: 195 MYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVA 254

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           + +++  CA+   +     IH YI   G   ++ +   +I+MYAK G +  A  +FD+M 
Sbjct: 255 LVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQ 314

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            R+V++W+++IAAY        A   F  M ++GI P+ +T VSL    +        + 
Sbjct: 315 VRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQR 374

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLI 419
               +        DV     +VD+  + G ++ A  + EG+PV KD + W  L+
Sbjct: 375 FFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 10/174 (5%)

Query: 56  SCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           +C KL   +  K +HA +  +G    V   T +++ YA  G +  +R  FD +  RNV T
Sbjct: 261 ACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVIT 320

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSV 169
           W++MI+ Y   G+  +A++ F    L SG+ P+  TF  +L AC +   + +G++   S+
Sbjct: 321 WSAMIAAYGYHGQGEKALELF-PMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSM 379

Query: 170 L-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQ 221
             + G   DV     ++ +  R G  + A ++ + MPV +D   W A++ G C+
Sbjct: 380 WDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL-GACR 432


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/696 (34%), Positives = 389/696 (55%), Gaps = 40/696 (5%)

Query: 163  KKIHCSVLKLGFEWDVFVAA-SLLHMYCRFG-LANVARKLFDDMPVRDSGSWNAMISGYC 220
            K +H  ++KL  +W+   AA +L+  Y  FG   + A   +  +P R+   WN+ +  + 
Sbjct: 440  KMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLP-RNYLKWNSFVEEFK 498

Query: 221  QSGNAVE-ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
             S  ++   L++  E+  +GV  D    +  L  C R  +I  G+ IH  ++K G + ++
Sbjct: 499  SSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDV 558

Query: 280  FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            ++   L+N Y +   +  A +VF +M   + + WN  I    QS         F  MQ +
Sbjct: 559  YLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS 618

Query: 340  GIQPDLLTLVS-LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             ++ +  T+V  L + +++L      +  HG+++R G F  DV +G +++DMY K   + 
Sbjct: 619  FLKAETATIVRVLQASISELGFLNMGKETHGYVLRNG-FDCDVYVGTSLIDMYVKNHSLT 677

Query: 399  SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE------------------ 440
            SA AVF+ +  +++ +WN+L++GY+  G+  +A+ +   ME+                  
Sbjct: 678  SAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYA 737

Query: 441  ---CNE-------------INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
               C +             + PN  +   +L A + +  L++G +IH   I+N    DVF
Sbjct: 738  MWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVF 797

Query: 485  VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
            VAT L+DMY K   + +A  +F ++   +   WN +I    I G G +A++ F +M   G
Sbjct: 798  VATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVG 857

Query: 545  VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
            V PD ITF +LL+AC +SGL+ EG +YF  M  ++ I P L+HY CMVDL GRAG+L  A
Sbjct: 858  VGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEA 917

Query: 605  HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
             + I  MP++PDA+IWGALLG+CRIH N++    A+  LF+++  N   Y+LM N+Y+  
Sbjct: 918  WDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIF 977

Query: 665  GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
             +WE +D +R L    G++    WS I++N +V +F +  + HP   KIY EL  L ++M
Sbjct: 978  NRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEM 1037

Query: 725  KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
            K LGYVPD + V Q+++E EK+ IL SH+E+LAI +G+I      PI++ KN R+C DCH
Sbjct: 1038 KKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCH 1097

Query: 785  NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +  K+IS +  RE+ +RD  RFHHF++G CSC D+W
Sbjct: 1098 SAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 72/453 (15%)

Query: 27  FSAAANSLQISPDCL-ENESREIDFDD-----LFQSCTKLHHV---KRLHALLVVSGKIK 77
           F ++A SL I  +   E   + + FD        ++CT++  +     +H  L+  G   
Sbjct: 497 FKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDL 556

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
            V+    L+NFY     L  +   F  +       WN  I + ++  +L + V+ F +  
Sbjct: 557 DVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQ 616

Query: 138 LTSGLRPDFYTFPPVLKACRN----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
             S L+ +  T   VL+A  +    L  GK+ H  VL+ GF+ DV+V  SL+ MY +   
Sbjct: 617 F-SFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 675

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT------- 246
              A+ +FD+M  R+  +WN+++SGY   G   +AL +L++M  EG+  D +T       
Sbjct: 676 LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 735

Query: 247 ----------------------------VASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
                                       +  +L  CA    +  G  IH   +++G   +
Sbjct: 736 YAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIED 795

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           +FV+  LI+MY+K   +++A +VF ++  + + SWN +I  +        A   F  MQ+
Sbjct: 796 VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQK 855

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AV 387
            G+ PD +T  +L      L+ C+NS    G I   GW   D +I +            +
Sbjct: 856 VGVGPDAITFTAL------LSACKNS----GLI-GEGWKYFDSMITDYRIVPRLEHYCCM 904

Query: 388 VDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
           VD+  + G ++ A  +   +P+K D   W  L+
Sbjct: 905 VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 937



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 17/176 (9%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S + L   K +H L + +G I+ VF +T L++ Y+    L  +   F  I  + + +WN 
Sbjct: 773 SLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNC 832

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           MI  +   G   EA+  F +     G+ PD  TF  +L AC+N   + +G K   S++  
Sbjct: 833 MIMGFAIFGLGKEAISVFNEMQ-KVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMIT- 890

Query: 173 GFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 221
               D  +   L H  C      R G  + A  L   MP++ D+  W A++ G C+
Sbjct: 891 ----DYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL-GSCR 941


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/574 (41%), Positives = 345/574 (60%), Gaps = 3/574 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
            S+L  C  S ++ +G  +H  ++  GL  +  ++  L+++YA  G++ HA R+FD M +
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R+V  WN +I AY +      A   +  M   G++PD  T        A L D    R V
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H  ++   W  ED+ +   +VDMYAK G ++ A AVF+ + V+D + WN++I  Y QNG 
Sbjct: 186 HERVLGTHWG-EDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
             EA+ + + M   N + P   T VS + A +   AL +G ++H    +        + T
Sbjct: 245 PMEALSLCRDMA-ANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VR 546
            LVDMY K G +  A  LF Q+ +   V WNA+I  +G+HG  D+AL  F +M  E  V 
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT 363

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           PD+ITFV +L+AC+H G+V E + +F +M + + IKP ++H+ C+VD+ G AG    A++
Sbjct: 364 PDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYD 423

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I+ MP++PD+ IWGALL  C+IH N+ELG +A  +L E++ E+ G YVL+SNIYA  GK
Sbjct: 424 LIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGK 483

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           WE    VR L  +RGLKK  G S IE+  K   F  G+ +HP+  +IY+EL  L   M  
Sbjct: 484 WEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSD 543

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GY+PD   V  DV +DEK +++ SHSERLAIAFG+IS+P  + + + KNLRVC DCH  
Sbjct: 544 AGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVV 603

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            K ISQI +REII+RD NR+HHF +G CSC DYW
Sbjct: 604 IKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 268/572 (46%), Gaps = 55/572 (9%)

Query: 146 FYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
           ++ +  VL++C   R+L  G+++H  +L  G   D  +A  L+ +Y   GL   AR+LFD
Sbjct: 62  YHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFD 121

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            MP R+   WN +I  Y + G    A+ +   M   GV  D  T    L  CA   ++ +
Sbjct: 122 GMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLET 181

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G  +H  ++      ++FV   L++MYAK G +  A  VFD++  RD V WNS+IAAY Q
Sbjct: 182 GREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQ 241

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           +  P+ A      M   G+ P + TLVS  S  A        R +HGF  RRG+  +D  
Sbjct: 242 NGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK- 300

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +  ++VDMYAK G +  A  +FE L  ++++SWN +I GY  +G   EA+++F  M    
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEA 360

Query: 443 EINPNQGTYVSILPAYSHVGALRQ-----GIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           ++ P+  T+V +L A +H G +++     G+ +    IK      V   TCLVD+ G  G
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPT----VQHFTCLVDVLGHAG 416

Query: 498 RIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFV 553
           R ++A  L   +P +  S  W A+++   IH     G+ AL    Q L E    D   +V
Sbjct: 417 RFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELAL----QKLIELEPEDAGNYV 472

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC-MVDLFGRAGHLGMAHNFIQNMP 612
            L    + SG   +  R   +M    G+K   K  GC  ++L G+       H F+    
Sbjct: 473 LLSNIYAQSGKWEKAARVRKLMTNR-GLK---KIIGCSWIELKGK------THGFLVGDA 522

Query: 613 VRP-DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
             P  A I+  L    R+ G M                + GY      ++ +VG  E  +
Sbjct: 523 SHPRSAEIYEELE---RLEGLM---------------SDAGYMPDTMPVFHDVGDDEKRN 564

Query: 672 EVRS----LARDRGLKKTPGWSSIEVNNKVDI 699
            +RS    LA   GL  TP  + + V   + +
Sbjct: 565 MMRSHSERLAIAFGLISTPSGTKLLVTKNLRV 596



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 217/431 (50%), Gaps = 15/431 (3%)

Query: 50  FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  + QSC     L   ++LH  L+VSG       +TKLV+ YA  G +  +R  FD + 
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGK 163
            RNV+ WN +I  Y R G    A+   Y+  +  G+ PD +T+P  LKAC  L+    G+
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQ-LYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  VL   +  D+FV A L+ MY + G  + AR +FD + VRDS  WN+MI+ Y Q+G
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
             +EAL +  +M   GV     T+ S +   A +  +  G  +H +  + G +    +  
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQ 342
           +L++MYAK G ++ A  +F+Q+M+R++VSWN++I  Y        A   F  M+ +A + 
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVT 363

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD +T V + S        + ++   G ++        V     +VD+    G    A  
Sbjct: 364 PDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYD 423

Query: 403 VFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPAYS 459
           + +G+P++ D   W  L+ G   +    + +E+ ++ +++  E+ P + G YV +   Y+
Sbjct: 424 LIKGMPMQPDSGIWGALLNGCKIH----KNVELGELALQKLIELEPEDAGNYVLLSNIYA 479

Query: 460 HVGALRQGIKI 470
             G   +  ++
Sbjct: 480 QSGKWEKAARV 490


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/617 (37%), Positives = 368/617 (59%), Gaps = 13/617 (2%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           + SWNA +    +  +  EAL++  +M   G S +  T       CA     L+G  +H 
Sbjct: 21  TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD--VVSWNSIIAAYEQSNDP 326
           +++K G E   FV  +LI+MY K   +  A +VFD+        V +N++IA Y  ++  
Sbjct: 81  HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M++ G+  + +T++ L  + A         S+H   +R G    D+ +GN 
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFG-LDGDLSVGNC 199

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           ++ MY + G ++ A  +F+G+P K +I+WN +I+GYAQNGLA   +++++ ME    I P
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTG-IVP 258

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           +  T V +L + +H+GA   G ++  R+  +   F+ F+   L++MY +CG +  A ++F
Sbjct: 259 DPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIF 318

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +   + + W AII+ +G+HGQG+ A+  F +M+     PD   FVS+L+ACSH+GL  
Sbjct: 319 DGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTE 378

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G  YF  M+ ++G++P  +HY C+VDL GRAG L  A   I +M V PD ++WGALLGA
Sbjct: 379 KGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGA 438

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C+IH N+EL  +A +++ E +  N+GYYVL+SNI++  G  EG+  VR + R+R LKK P
Sbjct: 439 CKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEP 498

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S +E   ++ +F  G+RTHP+ ++IY  L  L   +K  G   D        +E   E
Sbjct: 499 GCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDND------QESRNE 552

Query: 747 HILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
            ++T    HSE+LAIAFG+I++ P + I + KNLRVCGDCH + K +S+I +R+++VRD+
Sbjct: 553 ELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDA 612

Query: 804 NRFHHFKDGICSCGDYW 820
            RFHHFK+G+CSC DYW
Sbjct: 613 TRFHHFKNGVCSCKDYW 629



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 259/501 (51%), Gaps = 17/501 (3%)

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCS 168
           +WN+ +    R     EA++ + Q  L SG  P+ +TFP   K+C +L   + G ++H  
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQM-LASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGH 81

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD--MPVRDSGSWNAMISGYCQSGNAV 226
           V+K G E + FV  SL+ MYC+      ARK+FD+       +  +NA+I+GY  +    
Sbjct: 82  VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +A+ +  +MR EGVS++ +T+  ++PVCA   ++  G  +H   V+ GL+ +L V N L+
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLL 201

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY + G +  A ++FD M E+ +++WN++I+ Y Q+         +  M+  GI PD +
Sbjct: 202 TMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPV 261

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           TLV + S  A L      R V   I   G F  +  + NA+++MYA+ G +  A A+F+G
Sbjct: 262 TLVGVLSSCAHLGAHAAGREVEQRIELSG-FGFNPFLKNALINMYARCGNLVKARAIFDG 320

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  K+VISW  +I GY  +G    A+++F  M   +E+ P+   +VS+L A SH G   +
Sbjct: 321 MTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL-PDGAAFVSVLSACSHAGLTEK 379

Query: 467 GIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCH 524
           G+     + ++  L       +C+VD+ G+ GR+++A  L   +        W A++   
Sbjct: 380 GLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC 439

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
            IH   + A   F ++++    P +I +  LL+         EG     +M  E  +K  
Sbjct: 440 KIHRNVELAELAFEKVIE--FEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLK-- 495

Query: 585 LKHYGC-MVDLFGRAGHLGMA 604
            K  GC  V+  GR  HL +A
Sbjct: 496 -KEPGCSYVEYQGRI-HLFLA 514



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 198/433 (45%), Gaps = 18/433 (4%)

Query: 50  FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD--H 104
           F   F+SC  L       +LH  ++ +G     F  T L++ Y     ++ +R  FD  H
Sbjct: 59  FPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENH 118

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD--- 161
            S      +N++I+ Y    R S+AV  F Q     G+  +  T   ++  C   +    
Sbjct: 119 HSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMR-KEGVSVNAVTMLGLIPVCAGPIHLGF 177

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G  +H   ++ G + D+ V   LL MY R G  + ARKLFD MP +   +WNAMISGY Q
Sbjct: 178 GTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQ 237

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G A   LD+  +M   G+  DP+T+  +L  CA      +G  +   I   G  FN F+
Sbjct: 238 NGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFL 297

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N LINMYA+ G +  A  +FD M E++V+SW +IIA Y        A   F  M  +  
Sbjct: 298 KNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDE 357

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-MRRGWFMEDVIIG-NAVVDMYAKLGIINS 399
            PD    VS+ S  +        + ++ F  M R + ++      + VVD+  + G +  
Sbjct: 358 LPDGAAFVSVLSACSHAG--LTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEE 415

Query: 400 ACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPA 457
           A  +   + V+ D   W  L+ G  +     E  E+    E+  E  P N G YV +   
Sbjct: 416 ARKLIGSMSVEPDGAVWGALL-GACKIHRNVELAEL--AFEKVIEFEPTNIGYYVLLSNI 472

Query: 458 YSHVGALRQGIKI 470
           +S  G +   +++
Sbjct: 473 FSEAGNMEGILRV 485


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/581 (40%), Positives = 351/581 (60%), Gaps = 7/581 (1%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF--GMMRHAL 299
           +D  ++ + +  C R  ++ +   I  ++V+  L  + F+++ LI   A    G + +A 
Sbjct: 5   LDQGSLVAAIKRCTRVGDLKA---IQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAH 61

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           R+F      ++  WN+II  Y  S+ PITA   +  M   GI P+  T   +     +L 
Sbjct: 62  RIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLL 121

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                + +H  I++ G   E  ++ N ++ +YA  G ++ AC +F+ +P  D  SW+T++
Sbjct: 122 RLCEGQELHSQIVKVGLDFETPLV-NGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMV 180

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           +GYAQNG A EA+++F+ M+  N ++ +  T  S++     +GAL  G  +H+ + K  +
Sbjct: 181 SGYAQNGQAVEALKLFREMQAEN-VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGV 239

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             DV + T LV MY KCG +D+A+ +F  +       W+ +I+ + IHG G+KAL  F  
Sbjct: 240 KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDA 299

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M      P+ +TF S+L+ACSHSGLV +G + F  M  E+ I P +KHYGCMVDLF RAG
Sbjct: 300 MKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAG 359

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            +G AH FIQ MP+ P+  +W  LLGAC+ HG  +LG   S ++ ++D  +   YVL+SN
Sbjct: 360 MVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSN 419

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           +YA++G+W  V +VRSL +D+  KK  GWSSIE+N  V  F  G+ +HP+ EKIY  L  
Sbjct: 420 VYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQ 479

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           +  K+K +G+V     VL D++E+EKE+ L  HSERLAIA+G++ +P  SPI+I KNLRV
Sbjct: 480 MARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRV 539

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           C DCH   K IS++  REIIVRD  RFHHF++  CSC DYW
Sbjct: 540 CRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 211/415 (50%), Gaps = 9/415 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRNVY 111
            + CT++  +K + A +V +   +  F ++KL+   A    G ++++   F    + N++
Sbjct: 14  IKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLF 73

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCS 168
            WN++I  Y        A+   Y+     G+ P+ YTF  VLKAC  L+   +G+++H  
Sbjct: 74  MWNTIIRGYSISDSPITAI-ALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQ 132

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           ++K+G +++  +   L+ +Y   G  + A  +FD+MP  DS SW+ M+SGY Q+G AVEA
Sbjct: 133 IVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEA 192

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L +  EM+ E VS D  T+AS++ VC     +  G  +H Y+ K G++ ++ +   L+ M
Sbjct: 193 LKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGM 252

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y+K G + +AL+VF  M ERDV +W+++IA Y        A   F  M+++   P+ +T 
Sbjct: 253 YSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTF 312

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            S+ S  +          +   +         +     +VD++ + G++  A    + +P
Sbjct: 313 TSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMP 372

Query: 409 VK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           ++ +V+ W TL+     +G       + + + + +  +P    YV +   Y+ +G
Sbjct: 373 IEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPEN--YVLVSNVYASLG 425



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 204/415 (49%), Gaps = 7/415 (1%)

Query: 145 DFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH--MYCRFGLANVARKLFD 202
           D  +    +K C  + D K I   +++     D F+ + L+        G    A ++F 
Sbjct: 6   DQGSLVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS 65

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
                +   WN +I GY  S + + A+ +  +M L G+S +  T   +L  C +   +  
Sbjct: 66  CTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCE 125

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G  +H  IVK GL+F   + N LI +YA  G M +A  +FD+M E D  SW+++++ Y Q
Sbjct: 126 GQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQ 185

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           +   + A   F  MQ   +  D  TL S+  +   L      + VH ++ + G  + DV+
Sbjct: 186 NGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKI-DVV 244

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G A+V MY+K G +++A  VF+G+  +DV +W+T+I GYA +G   +A+++F  M+   
Sbjct: 245 LGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSK 304

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGRIDD 501
            I PN  T+ S+L A SH G + +G +I   +  +  +   +    C+VD++ + G +  
Sbjct: 305 TI-PNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGH 363

Query: 502 AMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVS 554
           A      +P   + V W  ++     HG  D   +  R++L  +   P++   VS
Sbjct: 364 AHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVS 418


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 358/591 (60%), Gaps = 37/591 (6%)

Query: 265 LIHLYIVKHGLEFNLFVSNNLI----NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
           +IH Y+++  +  ++F ++ LI    +  +   ++ +A R+F Q+   ++  +N++I  +
Sbjct: 35  IIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGH 94

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             S +P  A  F+   Q+ G+ PD LT   L     +L+        HG I++ G F +D
Sbjct: 95  SGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHG-FEKD 153

Query: 381 VIIGNAVVDMYA-------------------------------KLGIINSACAVFEGLPV 409
           V + N++V MYA                               K G + SA  +F+ +P 
Sbjct: 154 VYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE 213

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           K++++W+T+I+GYAQN    +A+E+F++++    +  N+   VS++ + +H+GAL  G +
Sbjct: 214 KNLVTWSTMISGYAQNNHFDKAVELFKVLQS-QGVRANETVMVSVISSCAHLGALELGER 272

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
            H  V+KN +  ++ + T LVDMY +CG ID A+ +F  +P   ++ W A+I+   +HG 
Sbjct: 273 AHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGY 332

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
            +++L +F  M++ G+ P  ITF ++L+ACSH GLV  G + F  M+ +  ++P L+HYG
Sbjct: 333 SERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYG 392

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GRAG L  A  F+  MPV+P+A +WGALLGACRIH N E+G      L ++  +
Sbjct: 393 CMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQ 452

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           + GYYVL+SNIYAN  +WE V E+R + + +GLKK PG S IE++ +V  F  G+ +HP+
Sbjct: 453 HSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPE 512

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            +KI      +  ++++ GY  + +  L D++E+EKE  L  HSE+LAIAFG++ S   +
Sbjct: 513 MDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHSEKLAIAFGMMRSEAGT 572

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PI+I KNLRVC DCH  TK IS++  RE+IVRD NRFHHF+ G+CSC DYW
Sbjct: 573 PIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGLCSCMDYW 623



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 250/543 (46%), Gaps = 64/543 (11%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC-----RFGLANVARKLFDDMPVR 207
           L+ C +L   K IH  +++     DVF AAS L  +C        L + A ++F  +   
Sbjct: 24  LETCSDLTHLKIIHAYMIRTHIICDVF-AASRLIAFCVDPSSGTSLIDYASRIFSQIQNP 82

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           +   +NAMI G+  S N  +A     + + +G+  D +T   ++  C +   I  G   H
Sbjct: 83  NLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFG----------------------MMR--------- 296
            +I+KHG E +++V N+L++MYA FG                      M+R         
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A ++FDQM E+++V+W+++I+ Y Q+N    A   F  +Q  G++ +   +VS+ S  A
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L         H ++++ G  + ++I+G A+VDMYA+ G I+ A  VFE LP +D +SW 
Sbjct: 263 HLGALELGERAHDYVVKNGMTL-NLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWT 321

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            LI G A +G +  +++ F  M E   + P   T+ ++L A SH G + +G +I   + +
Sbjct: 322 ALIAGLAMHGYSERSLKYFATMVEAG-LTPRDITFTAVLSACSHGGLVERGFQIFESMKR 380

Query: 477 NCLCFDVFVA-TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ---GD 531
           +           C+VD+ G+ G++++A     ++P   + P W A++    IH     G+
Sbjct: 381 DHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGE 440

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +      Q+L     P H  +  LL+    +    E       M +  G+K    H   +
Sbjct: 441 RVGKILIQLL-----PQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGH--SL 493

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPD----ASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           ++L GR       H F       P+      +W  +L   R  G        +D LF++D
Sbjct: 494 IELDGR------VHKFTIGDSSHPEMDKIERMWEEILMRIRAAG---YRGNTADALFDID 544

Query: 648 SEN 650
            E 
Sbjct: 545 EEE 547



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 62/416 (14%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD----LSFSRHTFDHISYRN 109
            ++C+ L H+K +HA ++ +  I  VF++++L+ F  +       + ++   F  I   N
Sbjct: 24  LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIH 166
           ++ +N+MI  +       +A   FY  +   GL PD  TFP ++K+C  L     G + H
Sbjct: 84  LFIFNAMIRGHSGSKNPDQAFH-FYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVA----------------------------- 197
             ++K GFE DV+V  SL+HMY  FG    A                             
Sbjct: 143 GHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVE 202

Query: 198 --RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
             RKLFD MP ++  +W+ MISGY Q+ +  +A+++   ++ +GV  +   + S++  CA
Sbjct: 203 SARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCA 262

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G   H Y+VK+G+  NL +   L++MYA+ G +  A+ VF+ + ERD +SW +
Sbjct: 263 HLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTA 322

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +IA          +  +F TM +AG+ P  +T  ++ S  +           HG ++ RG
Sbjct: 323 LIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACS-----------HGGLVERG 371

Query: 376 WFMEDVIIGN-----------AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
           + + + +  +            +VD+  + G +  A      +PVK +   W  L+
Sbjct: 372 FQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALL 427



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 38/310 (12%)

Query: 48  IDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           + F  L +SCTKLH +    + H  ++  G  K V+    LV+ YA  GD   +   F  
Sbjct: 120 LTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQR 179

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCF------------------------------Y 134
           + Y +V +W SMI  + +CG +  A   F                              +
Sbjct: 180 MYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELF 239

Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +   + G+R +      V+ +C +L     G++ H  V+K G   ++ +  +L+ MY R 
Sbjct: 240 KVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARC 299

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G  + A  +F+D+P RD+ SW A+I+G    G +  +L     M   G++   IT  ++L
Sbjct: 300 GSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVL 359

Query: 252 PVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERD 309
             C+    +  G  I   + + H +E  L     ++++  + G +  A R   +M ++ +
Sbjct: 360 SACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPN 419

Query: 310 VVSWNSIIAA 319
              W +++ A
Sbjct: 420 APVWGALLGA 429


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/671 (35%), Positives = 386/671 (57%), Gaps = 10/671 (1%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR- 108
           L ++C    ++K+   +H  +V  G    +     L+N Y +      ++  F  I    
Sbjct: 9   LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           ++  WN +++   +     E ++ F++      L+PD +T+P VLKAC  L     GK +
Sbjct: 69  DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  V+K GF  DV V +S + MY +  +   A KLFD+MP RD  SWN +IS Y Q G  
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            +AL++ +EM++ G   D +T+ +++  CAR  ++  G  IH+ +V+ G   + FVS+ L
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K G +  A  VF+Q+  ++VVSWNS+IA Y    D  +    F  M + GI+P L
Sbjct: 249 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 308

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            TL S+    ++  + +  + +HG+I+R      D+ + ++++D+Y K G I SA  VF+
Sbjct: 309 TTLSSILMACSRSVNLQLGKFIHGYIIRNR-VEADIFVNSSLIDLYFKCGNIGSAENVFQ 367

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P  +V+SWN +I+GY + G   EA+ +F  M +   + P+  T+ S+LPA S +  L 
Sbjct: 368 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG-VKPDAITFTSVLPACSQLAVLE 426

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +G +IH  +I++ L  +  V   L+DMY KCG +D+A+ +F Q+P    V W ++I+ +G
Sbjct: 427 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 486

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HGQ  +AL  F +M     +PD +TF+++L+ACSH+GLV EG  YF+ M  E+G KP +
Sbjct: 487 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 546

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMP-VRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           +HY C++DL GR G L  A+  +Q  P +R D  +   L  AC +H  ++LG      L 
Sbjct: 547 EHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLI 606

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           E D ++   Y+++SN+YA+V KW+ V +VR   ++ GLKK PG S IEV  ++  F   +
Sbjct: 607 EKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVED 666

Query: 705 RTHPKYEKIYD 715
           ++HP+ + IY+
Sbjct: 667 KSHPQADMIYE 677



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 215/404 (53%), Gaps = 9/404 (2%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           MD   + S+L  C  S  +  G LIH  IV  GL+ N+ +  +LIN+Y    + + A  V
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 302 FDQMMER--DVVSWNSIIAAYEQSNDPITA-HGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
           F Q +E   D+  WN ++AA  ++   I     F   +    ++PD  T  S+    + L
Sbjct: 61  F-QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + VH  +++ G+ M DV++ ++ V MYAK  +   A  +F+ +P +DV SWN +
Sbjct: 120 GRVGYGKMVHTHVIKSGFAM-DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNV 178

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+ Y Q+G   +A+E+F+ M + +   P+  T  +++ + + +  L +G +IH  ++++ 
Sbjct: 179 ISCYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSG 237

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
              D FV++ LVDMYGKCG ++ A  +F Q+ R + V WN++I+ + + G     +  FR
Sbjct: 238 FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFR 297

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M +EG+RP   T  S+L ACS S  +  G ++ H       ++  +     ++DL+ + 
Sbjct: 298 RMDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKC 356

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALL-GACRIHGNMELGAVASD 641
           G++G A N  QNMP + +   W  ++ G  ++   +E   + +D
Sbjct: 357 GNIGSAENVFQNMP-KTNVVSWNVMISGYVKVGSYLEALVIFTD 399


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/559 (41%), Positives = 346/559 (61%), Gaps = 6/559 (1%)

Query: 266 IHLYIVKHGLEFNLFVSNNLIN---MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           I  Y +K  L+ ++ V   LIN   +      M HA  +FDQ++++D++ +N +   Y +
Sbjct: 48  IQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYAR 107

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           SN P  A   F  +  +G+ PD  T  SL    A     R    +H F ++ G    ++ 
Sbjct: 108 SNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG-LNHNIY 166

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           I   +++MYA+   +N+A  VF+ +    ++S+N +ITGYA++   +EA+ +F+ ++  N
Sbjct: 167 ICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASN 226

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            I P   T +S++ + + +GAL  G  IH  V K      V V T L+DM+ KCG + DA
Sbjct: 227 -IEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDA 285

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
           +S+F  +    +  W+A+I     HG G KA++ F +M  EGVRPD ITF+ LL ACSH+
Sbjct: 286 ISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHA 345

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV +G+ YF+ M + +GI P +KHYGCMVDL GRAGHL  A+NF+  + ++    +W  
Sbjct: 346 GLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRT 405

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LL AC  HGN+E+     +R+FE+D  + G YV++SN+YA VG+WE V+ +R L +DRG+
Sbjct: 406 LLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGV 465

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ-DVE 741
            K PG SS+EVNN V  F++G+  H    ++   L  L  ++K +GYVPD S V   D+E
Sbjct: 466 VKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADME 525

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E+ KE +L  HSE+LA+AFG++++PP + I++ KNLR+CGDCHN  K IS I  R+I++R
Sbjct: 526 EEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIR 585

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D  RFH F+DG CSCGD+W
Sbjct: 586 DVQRFHRFEDGKCSCGDFW 604



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 203/417 (48%), Gaps = 10/417 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF---SRHTFDHISYRN 109
           L   CT L+ +K++ A  + +     +   TKL+NF       S+   + H FD I  ++
Sbjct: 35  LLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKD 94

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +  +N M   Y R      A   F +  L SGL PD YTF  +LKAC   + L +G  +H
Sbjct: 95  IILFNIMARGYARSNSPYLAFSLFGEL-LCSGLLPDDYTFSSLLKACASSKALREGMGLH 153

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
           C  +KLG   ++++  +L++MY      N AR +FD+M      S+NA+I+GY +S    
Sbjct: 154 CFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPN 213

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  E++   +    +T+ S++  CA    +  G  IH Y+ K G +  + V+  LI
Sbjct: 214 EALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALI 273

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +M+AK G +  A+ +F+ M  RD  +W+++I A+    D + A   F  M++ G++PD +
Sbjct: 274 DMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEI 333

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T + L    +        R     + +       +     +VD+  + G ++ A    + 
Sbjct: 334 TFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDK 393

Query: 407 LPVKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           L +K   I W TL++  + +G    A  V + + E ++   + G YV +   Y+ VG
Sbjct: 394 LEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDD--AHGGDYVILSNLYARVG 448


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/706 (36%), Positives = 396/706 (56%), Gaps = 22/706 (3%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANL 92
           +SPD       +  F  + ++C  L  VK    +H  + + G  + VF  + L+  YA  
Sbjct: 54  VSPD-------KYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAEN 106

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G LS +++ FD+I  ++   WN M++ YV+ G    A+  F +    S ++P+  TF  V
Sbjct: 107 GHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACV 165

Query: 153 LKACRN--LVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L  C +  ++D G ++H   +  G E D  VA +LL MY +      ARKLFD  P  D 
Sbjct: 166 LSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDL 225

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SWN +ISGY Q+G   EA  +   M   G+  D IT AS LP      ++     IH Y
Sbjct: 226 VSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGY 285

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           I++H +  ++F+ + LI++Y K   +  A ++  Q    D V   ++I+ Y  +     A
Sbjct: 286 IIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEA 345

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  + Q  ++P  +T  S+    A L      + +HG I++     E   +G+A++D
Sbjct: 346 LEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKCHVGSAILD 404

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYAK G ++ AC VF  +  KD I WN++IT  +QNG   EAI +F+ M     +   + 
Sbjct: 405 MYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMG----MEGTRY 460

Query: 450 TYVSI---LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
             VSI   L A +++ AL  G +IH  +IK  L  D++  + L+DMY KCG ++ +  +F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            ++   + V WN+IIS +G HG   + L  F +ML  G++PDH+TF+ +++AC H+G V 
Sbjct: 521 DRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG RY+H+M EE+GI   ++HY C+ D+FGRAG L  A   I +MP  PDA +WG LLGA
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGA 640

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C IHGN+EL  VAS  LF++D  N GYYVL++N+ A  GKW  V +VRS+ ++RG++K P
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           G+S IEVNN   +F   + +HP   +IY  L +L  ++K  GYVP 
Sbjct: 701 GYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 173/550 (31%), Positives = 297/550 (54%), Gaps = 8/550 (1%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y   G L  +++ F  +       WN MI  +   G+ + A+  FY   L +G+ PD Y
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYAL-LFYLKMLGAGVSPDKY 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           TFP V+KAC   +++  GK +H +V  +G + DVFV +SL+ +Y   G  + A+ LFD++
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P +DS  WN M++GY ++G++  A+ I  EMR   +  + +T A +L VCA    +  G 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H   V  GLE +  V+N L+ MY+K   ++ A ++FD   + D+VSWN II+ Y Q+ 
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F  M  AGI+PD +T  S    V +L   ++ + +HG+I+R    + DV + 
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL-DVFLK 298

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           +A++D+Y K   +  A  +       D +   T+I+GY  NG   EA+E F+ + +   +
Sbjct: 299 SALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERM 357

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P   T+ SI PA++ + AL  G ++H  +IK  L     V + ++DMY KCGR+D A  
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++    ++ WN++I+    +G+  +A+N FRQM  EG R D ++    L+AC++   
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           +  G+   H +  +  ++  L     ++D++ + G+L  +      M  R + S W +++
Sbjct: 478 LHYGKE-IHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVS-WNSII 535

Query: 625 GACRIHGNME 634
            A   HG+++
Sbjct: 536 SAYGNHGDLK 545


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 358/593 (60%), Gaps = 4/593 (0%)

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           + L  M L G+  +     ++L  C R   I  G  +H +++K      +++   LI  Y
Sbjct: 44  EALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFY 103

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K   +R A  VFD M ER+VVSW ++I+AY Q      A   F  M ++G +P+  T  
Sbjct: 104 VKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFA 163

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           ++ +     +     R +H  I++   +   V +G++++DMYAK G I+ A  +F+ LP 
Sbjct: 164 TVLTSCIGSSGFVLGRQIHSHIIKLN-YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE 222

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +DV+S   +I+GYAQ GL  EA+E+F+ ++    +  N  TY S+L A S + AL  G +
Sbjct: 223 RDVVSCTAIISGYAQLGLDEEALELFRRLQR-EGMQSNYVTYTSVLTALSGLAALDHGKQ 281

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H  ++++ +   V +   L+DMY KCG +  A  +F  +   + + WNA++  +  HG+
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341

Query: 530 GDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFH-MMQEEFGIKPHLKH 587
           G + L  F  M+DE  V+PD +T +++L+ CSH GL  +G   F+ M   +  ++P  KH
Sbjct: 342 GREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKH 401

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           YGC+VD+ GRAG +  A  F++ MP  P A+IWG LLGAC +H N+++G     +L +++
Sbjct: 402 YGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            EN G YV++SN+YA+ G+WE V  +R+L   + + K PG S IE++  +  F+  + +H
Sbjct: 462 PENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSH 521

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P+ E++  +++ L+A+ K  GYVPD S VL DV+E++KE IL SHSE+LA+ FG+I++P 
Sbjct: 522 PRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPE 581

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             PI++ KNLR+C DCHN+ K+ S+I  RE+ +RD NRFH    G CSCGDYW
Sbjct: 582 SVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 220/422 (52%), Gaps = 11/422 (2%)

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 172
           ++++++   RL EA+          GL  +F  +  VL  C   R + +G+++H  ++K 
Sbjct: 32  VLNIHIHDTRLREAL----LHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKT 87

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
            +   V++   L+  Y +      AR +FD MP R+  SW AMIS Y Q G A +AL + 
Sbjct: 88  HYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLF 147

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            +M   G   +  T A++L  C  S   + G  IH +I+K   E +++V ++L++MYAK 
Sbjct: 148 VQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKD 207

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A  +F  + ERDVVS  +II+ Y Q      A   F  +Q+ G+Q + +T  S+ 
Sbjct: 208 GKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVL 267

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           + ++ L    + + VH  ++ R      V++ N+++DMY+K G +  A  +F+ L  + V
Sbjct: 268 TALSGLAALDHGKQVHNHLL-RSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTV 326

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ISWN ++ GY+++G   E +E+F +M + N++ P+  T +++L   SH G   +G+ I  
Sbjct: 327 ISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFY 386

Query: 473 RVIKNCLCF--DVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
            +    +    D     C+VDM G+ GR++ A     ++P   S+  W  ++    +H  
Sbjct: 387 DMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSN 446

Query: 530 GD 531
            D
Sbjct: 447 LD 448



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 218/436 (50%), Gaps = 38/436 (8%)

Query: 49  DFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           D++ +   C +   ++   R+HA ++ +  +  V+  T+L+ FY     L  +RH FD +
Sbjct: 60  DYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVM 119

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             RNV +W +MIS Y + G  S+A+  F Q  L SG  P+ +TF  VL +C      V G
Sbjct: 120 PERNVVSWTAMISAYSQRGYASQALSLFVQM-LRSGTEPNEFTFATVLTSCIGSSGFVLG 178

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           ++IH  ++KL +E  V+V +SLL MY + G  + AR +F  +P RD  S  A+ISGY Q 
Sbjct: 179 RQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQL 238

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G   EAL++   ++ EG+  + +T  S+L   +    +  G  +H ++++  +   + + 
Sbjct: 239 GLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQ 298

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGI 341
           N+LI+MY+K G + +A R+FD + ER V+SWN+++  Y +  +       F  M  +  +
Sbjct: 299 NSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKV 358

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGN-----------AVVD 389
           +PD +T      ++A L+ C      HG +  +G     D+  G             VVD
Sbjct: 359 KPDSVT------VLAVLSGCS-----HGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVD 407

Query: 390 MYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYA-QNGLASEAIEVFQMMEECNEINP- 446
           M  + G + +A    + +P +   + W  L+   +  + L        Q++    +I P 
Sbjct: 408 MLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLL----QIEPE 463

Query: 447 NQGTYVSILPAYSHVG 462
           N G YV +   Y+  G
Sbjct: 464 NAGNYVILSNLYASAG 479


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/667 (36%), Positives = 392/667 (58%), Gaps = 8/667 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           ++L   + +H +V+K GF +  F+   L+  Y + G    ARKLFD++P R   +WN+MI
Sbjct: 15  KSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMI 73

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           S +   G + EA++    M +EGV  D  T ++I    ++   I  G   H   V  GLE
Sbjct: 74  SSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLE 133

Query: 277 -FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             + FV++ L++MYAKF  MR A  VF +++E+DVV + ++I  Y Q      A   F  
Sbjct: 134 VLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFED 193

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKL 394
           M   G++P+  TL  +      L D  N + +HG +++ G  +E V+    +++ MY++ 
Sbjct: 194 MVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSG--LESVVASQTSLLTMYSRC 251

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
            +I  +  VF  L   + ++W + + G  QNG    A+ +F+ M  C+ I+PN  T  SI
Sbjct: 252 NMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCS-ISPNPFTLSSI 310

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A S +  L  G +IHA  +K  L  + +    L+++YGKCG +D A S+F  +     
Sbjct: 311 LQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDV 370

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V  N++I  +  +G G +AL  F ++ + G+ P+ +TF+S+L AC+++GLV EG + F  
Sbjct: 371 VAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFAS 430

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           ++    I+  + H+ CM+DL GR+  L  A   I+ +   PD  +W  LL +C+IHG +E
Sbjct: 431 IRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVE 489

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +      ++ E+   + G ++L++N+YA+ GKW  V E++S  RD  LKK+P  S ++V+
Sbjct: 490 MAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVD 549

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
            +V  F  G+ +HP+  +I++ L  L  K+K+LGY P+  FVLQD++E++K   L  HSE
Sbjct: 550 REVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSE 609

Query: 755 RLAIAFGIISSPPK-SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           +LAIA+ +  +  + + I+IFKNLRVCGDCH+W KF+S +T R+II RDS RFHHFK G+
Sbjct: 610 KLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGL 669

Query: 814 CSCGDYW 820
           CSC DYW
Sbjct: 670 CSCKDYW 676



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/493 (32%), Positives = 260/493 (52%), Gaps = 17/493 (3%)

Query: 62  HVKRLHALLVV-SGKIKTVFSST----KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSM 116
           H K L  L  V +  IK+ FS +    KL++ Y   G L+ +R  FD +  R++ TWNSM
Sbjct: 13  HTKSLTTLRAVHTNVIKSGFSYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSM 72

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLG 173
           IS ++  G+  EAV+ FY   L  G+ PD YTF  + KA   L     G++ H   + LG
Sbjct: 73  ISSHISHGKSKEAVE-FYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLG 131

Query: 174 FE-WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
            E  D FVA++L+ MY +F     A  +F  +  +D   + A+I GY Q G   EAL I 
Sbjct: 132 LEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIF 191

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           ++M   GV  +  T+A IL  C    ++++G LIH  +VK GLE  +    +L+ MY++ 
Sbjct: 192 EDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRC 251

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
            M+  +++VF+Q+   + V+W S +    Q+     A   F  M +  I P+  TL S+ 
Sbjct: 252 NMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSIL 311

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              + L        +H   M+ G    +   G A++++Y K G ++ A +VF+ L   DV
Sbjct: 312 QACSSLAMLEVGEQIHAITMKLG-LDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDV 370

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++ N++I  YAQNG   EA+E+F+ ++    + PN  T++SIL A ++ G + +G +I A
Sbjct: 371 VAINSMIYAYAQNGFGHEALELFERLKNMGLV-PNGVTFISILLACNNAGLVEEGCQIFA 429

Query: 473 RVIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
            +  N    L  D F  TC++D+ G+  R+++A  L  +V     V W  +++   IHG+
Sbjct: 430 SIRNNHNIELTIDHF--TCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGE 487

Query: 530 GDKALNFFRQMLD 542
            + A     ++L+
Sbjct: 488 VEMAEKVMSKILE 500


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/573 (39%), Positives = 347/573 (60%), Gaps = 40/573 (6%)

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T  S+L  CA    +L G  +H ++ K+G E NLFV N+L+++Y K G    A ++F
Sbjct: 126 DEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLF 185

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D+M+ RDVVSWN++I+ Y  S     A   F  M +         LVS +++++      
Sbjct: 186 DEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKN-------LVSWSTMISG----- 233

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
                                       YA++G +  A  +FE +P+++V+SWN +I GY
Sbjct: 234 ----------------------------YARVGNLEEARQLFENMPMRNVVSWNAMIAGY 265

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           AQN   ++AIE+F+ M+    + PN  T VS+L A +H+GAL  G  IH  + +N +   
Sbjct: 266 AQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVG 325

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           +F+   L DMY KCG + +A  +F+++     + W+ II    ++G  ++A NFF +M++
Sbjct: 326 LFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIE 385

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
           +G+ P+ I+F+ LLTAC+H+GLV +G  YF MM + +GI P ++HYGC+VDL  RAG L 
Sbjct: 386 DGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLD 445

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A + I +MP++P+  +WGALLG CRI+ + E G     R+ E+DS + G  V ++N+YA
Sbjct: 446 QAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYA 505

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
           ++G+ +     R   RD    KTPG S IE+NN V  F+ G+ +HP+  +IY  +R L  
Sbjct: 506 SMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKW 565

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
           KMK  GY P    V+ +++E+EKE  L++HSE+LA+AFG+I++   + I+I KNLRVC D
Sbjct: 566 KMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCND 625

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           CH+  K IS+I EREI+VRD +RFHHFKDG CS
Sbjct: 626 CHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 233/460 (50%), Gaps = 49/460 (10%)

Query: 82  STKLVNFYANLGDLSFSRHTFDH-ISYRNVYTWNSMISVYVRCGRLSEAVDCFY-QFTLT 139
           + K +   ++ G+L  S   F+H +S+ N++ +N+++  + +       +  F  Q  L 
Sbjct: 61  AVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLP 120

Query: 140 SGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
           +   PD YTF  VLKAC  L   ++G+K+HC V K G E ++FV  SL+ +Y + G   +
Sbjct: 121 NAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCI 180

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A+KLFD+M VRD  SWN +ISGYC SG   +A  + D M                     
Sbjct: 181 AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGM--------------------- 219

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                             +E NL   + +I+ YA+ G +  A ++F+ M  R+VVSWN++
Sbjct: 220 ------------------MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAM 261

Query: 317 IAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           IA Y Q+     A   F  MQ + G+ P+ +TLVS+ S  A L      + +H FI RR 
Sbjct: 262 IAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFI-RRN 320

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
                + +GNA+ DMYAK G +  A  VF  +  +DVISW+ +I G A  G A+EA   F
Sbjct: 321 KIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFF 380

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYG 494
             M E + + PN  +++ +L A +H G + +G++    + +   +   +    C+VD+  
Sbjct: 381 AEMIE-DGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLS 439

Query: 495 KCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQGDKA 533
           + GR+D A SL   +P   +V  W A++    I+   ++ 
Sbjct: 440 RAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERG 479



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 202/439 (46%), Gaps = 50/439 (11%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  + ++C  L  V   +++H  +   G    +F    LV+ Y  +G    ++  FD
Sbjct: 127 EYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFD 186

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            +  R+V +WN++IS Y   G + +A                           R + DG 
Sbjct: 187 EMVVRDVVSWNTLISGYCFSGMVDKA---------------------------RMVFDGM 219

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
                      E ++   ++++  Y R G    AR+LF++MP+R+  SWNAMI+GY Q+ 
Sbjct: 220 ----------MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNE 269

Query: 224 NAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
              +A+++  +M+ E G++ + +T+ S+L  CA    +  G  IH +I ++ +E  LF+ 
Sbjct: 270 KYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLG 329

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII---AAYEQSNDPITAHGFFTTMQQA 339
           N L +MYAK G +  A  VF +M ERDV+SW+ II   A Y  +N+   A  FF  M + 
Sbjct: 330 NALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANE---AFNFFAEMIED 386

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G++P+ ++ + L +                 + +       +     VVD+ ++ G ++ 
Sbjct: 387 GLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQ 446

Query: 400 ACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
           A ++   +P++ +VI W  L+ G      A     V   + E +  + + G+ V +   Y
Sbjct: 447 AESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELD--SNHSGSLVYLANVY 504

Query: 459 SHVGALRQGIKIHARVIKN 477
           + +G L        R+  N
Sbjct: 505 ASMGRLDDAASCRLRMRDN 523



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 120/270 (44%), Gaps = 25/270 (9%)

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALR 465
           L   ++ ++N L+  ++Q+      I  F   +   N  NP++ T+ S+L A + +  + 
Sbjct: 85  LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +G K+H  V K     ++FV   LVD+Y K G    A  LF ++     V WN +IS + 
Sbjct: 145 EGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYC 204

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK--- 582
             G  DKA   F  M+++ +    +++ ++++  +  G + E ++ F  M     +    
Sbjct: 205 FSGMVDKARMVFDGMMEKNL----VSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNA 260

Query: 583 -----PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
                   + Y   ++LF +  H G          + P+     ++L AC   G ++LG 
Sbjct: 261 MIAGYAQNEKYADAIELFRQMQHEG---------GLAPNDVTLVSVLSACAHLGALDLGK 311

Query: 638 VASDRLFEVDSENVGYYV--LMSNIYANVG 665
               R    +   VG ++   ++++YA  G
Sbjct: 312 WIH-RFIRRNKIEVGLFLGNALADMYAKCG 340


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/574 (39%), Positives = 348/574 (60%), Gaps = 2/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V  IL +CAR+  ++     H  I++  LE ++ + N LIN Y+K G +  A +VFD M+
Sbjct: 64  VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ER +VSWN++I  Y ++     A   F  M+  G +    T+ S+ S      D    + 
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H   ++    + ++ +G A++D+YAK G+I  A  VFE +  K  ++W++++ GY QN 
Sbjct: 184 LHCLSVKTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              EA+ +++  +  + +  NQ T  S++ A S++ AL +G ++HA + K+    +VFVA
Sbjct: 243 NYEEALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           +  VDMY KCG + ++  +F +V   +   WN IIS    H +  + +  F +M  +G+ 
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +TF SLL+ C H+GLV EG+R+F +M+  +G+ P++ HY CMVD+ GRAG L  A+ 
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I+++P  P ASIWG+LL +CR++ N+EL  VA+++LFE++ EN G +VL+SNIYA   +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           WE + + R L RD  +KK  G S I++ +KV  F  G   HP+  +I   L NL  K + 
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GY P     L DVE  +KE +L  HSE+LA+ FG++  P  SP++I KNLR+C DCH +
Sbjct: 542 FGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEF 601

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            K  S  T R IIVRD NRFHHF DG CSCGD+W
Sbjct: 602 MKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 208/377 (55%), Gaps = 9/377 (2%)

Query: 152 VLKAC-RN--LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+ C RN  +++ K  H  ++++  E DV +   L++ Y + G   +AR++FD M  R 
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWN MI  Y ++    EALDI  EMR EG      T++S+L  C  + + L    +H 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             VK  ++ NL+V   L+++YAK GM++ A++VF+ M ++  V+W+S++A Y Q+ +   
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   +   Q+  ++ +  TL S+    + L      + +H  I + G F  +V + ++ V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAV 305

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMYAK G +  +  +F  +  K++  WNT+I+G+A++    E + +F+ M++ + ++PN+
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNE 364

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVATCLVDMYGKCGRIDDAMSLF 506
            T+ S+L    H G + +G +   ++++    L  +V   +C+VD+ G+ G + +A  L 
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423

Query: 507 YQVPRSSSVP-WNAIIS 522
             +P   +   W ++++
Sbjct: 424 KSIPFDPTASIWGSLLA 440



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 222/463 (47%), Gaps = 24/463 (5%)

Query: 14  CKLLPLLQAHRPLFS-----AAANSLQISPDCLENE-SREIDFDDLFQSCTK---LHHVK 64
           CK+LP       L       A+ +  ++SP    NE S      ++ Q C +   +   K
Sbjct: 22  CKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAK 81

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
             H  ++       V     L+N Y+  G +  +R  FD +  R++ +WN+MI +Y R  
Sbjct: 82  ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 141

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVA 181
             SEA+D F +     G +   +T   VL AC    + ++ KK+HC  +K   + +++V 
Sbjct: 142 MESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +LL +Y + G+   A ++F+ M  + S +W++M++GY Q+ N  EAL +    +   + 
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            +  T++S++  C+    ++ G  +H  I K G   N+FV+++ ++MYAK G +R +  +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F ++ E+++  WN+II+ + +   P      F  MQQ G+ P+ +T  SL S+       
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLIT 420
              R     +        +V+  + +VD+  + G+++ A  + + +P     S W +L+ 
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440

Query: 421 G---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYS 459
               Y    LA  A E +F++  E      N G +V +   Y+
Sbjct: 441 SCRVYKNLELAEVAAEKLFELEPE------NAGNHVLLSNIYA 477



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 2/188 (1%)

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+     IL   +  GA+ +    H ++I+  L  DV +   L++ Y KCG ++ A  +F
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +   S V WN +I  +  +    +AL+ F +M +EG +    T  S+L+AC  +    
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           E ++  H +  +  I  +L     ++DL+ + G +  A    ++M  +   + W +++  
Sbjct: 180 ECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237

Query: 627 CRIHGNME 634
              + N E
Sbjct: 238 YVQNKNYE 245


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/699 (36%), Positives = 404/699 (57%), Gaps = 15/699 (2%)

Query: 128 EAVDCFYQFTLTSGLRPDFY-----TFPPV-LKACRNLVDGKKIHCSVLKLGF-EWDVFV 180
           EA   F        + P+ Y     +FP   L     L  G+++H  V+  G  ++ V +
Sbjct: 12  EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGLVDFMVGI 71

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              L++MY + G    AR++F  M  +DS SWN+MI+G  Q+G  +EA++    MR   +
Sbjct: 72  GNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEI 131

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                T+ S L  CA       G  IH   +K G++ N+ VSN L+ +YA+ G +    +
Sbjct: 132 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 191

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +F  M E D VSWNSII A   S   +  A   F    +AG + + +T  S+ S V+ L+
Sbjct: 192 IFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLS 251

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
                + +HG  ++     ++    NA++  Y K G ++    +F  +  + D ++WN++
Sbjct: 252 FGELGKQIHGLALKYN-IADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSM 310

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+GY  N L ++A+++   M +  +   +   Y ++L A++ V  L +G+++HA  ++ C
Sbjct: 311 ISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRAC 369

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L  DV V + LVDMY KCGR+D A+  F  +P  +S  WN++IS +  HGQG++AL  F 
Sbjct: 370 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFA 429

Query: 539 QM-LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
            M LD    PDH+TFV +L+ACSH+GL+ EG ++F  M + +G+ P ++H+ CM DL GR
Sbjct: 430 NMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGR 489

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGAC-RIHG-NMELGAVASDRLFEVDSENVGYYV 655
           AG L    +FI  MPV+P+  IW  +LGAC R +G   ELG  A++ LF+++ EN   YV
Sbjct: 490 AGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 549

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           L+ N+YA  G+WE + + R   +D  +KK  G+S + + + V +F  G+++HP  + IY 
Sbjct: 550 LLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYK 609

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS-PIQIF 774
           +L+ L  KM+  GYVP   F L D+E++ KE IL+ HSE+LA+AF + +    + PI+I 
Sbjct: 610 KLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIM 669

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           KNLRVCGDCH+  K+IS+I  R+II+RDSNR+   +  I
Sbjct: 670 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRYEDHQPQI 708



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 240/498 (48%), Gaps = 17/498 (3%)

Query: 60  LHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           L   + +H  ++ +G +   V     LVN YA  G ++ +R  F  +  ++  +WNSMI+
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFE 175
              + G   EAV+  YQ      + P  +T    L +C +L     G++IH   LKLG +
Sbjct: 109 GLDQNGCFIEAVE-RYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 167

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV-EALDILDE 234
            +V V+ +L+ +Y   G  N  RK+F  MP  D  SWN++I     S  ++ EA+     
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLN 227

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
               G  ++ IT +S+L   +       G  IH   +K+ +       N LI  Y K G 
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 295 MRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
           M    ++F +M E RD V+WNS+I+ Y  +     A      M Q G + D     ++ S
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A +        VH   + R     DV++G+A+VDMY+K G ++ A   F  +PV++  
Sbjct: 348 AFASVATLERGMEVHACSV-RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 406

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SWN++I+GYA++G   EA+++F  M+   +  P+  T+V +L A SH G L +G K H  
Sbjct: 407 SWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFE 465

Query: 474 VIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII-SCHGIHGQ 529
            + +       +   +C+ D+ G+ G +D       ++P + + + W  ++ +C   +G+
Sbjct: 466 SMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGR 525

Query: 530 ----GDKALNFFRQMLDE 543
               G KA     Q+  E
Sbjct: 526 KAELGKKAAEMLFQLEPE 543



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 21/182 (11%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F S   L     +HA  V +     V   + LV+ Y+  G L ++   F+ +  RN Y+W
Sbjct: 349 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 408

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
           NSMIS Y R G+  EA+  F    L     PD  TF  VL AC         H  +L+ G
Sbjct: 409 NSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACS--------HAGLLEEG 460

Query: 174 FEW-----DVF-VAASLLHMYC------RFGLANVARKLFDDMPVRDSG-SWNAMISGYC 220
           F+      D + +A  + H  C      R G  +      D MPV+ +   W  ++   C
Sbjct: 461 FKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACC 520

Query: 221 QS 222
           ++
Sbjct: 521 RA 522


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/602 (37%), Positives = 353/602 (58%), Gaps = 7/602 (1%)

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           +C   +   A+ +LD M   GV  D IT + ++  C     +  G  +H +I  +G    
Sbjct: 260 HCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPK 319

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            F++N LINMY KF ++  A  +FD+M ER+VVSW ++I+AY  +     A      M +
Sbjct: 320 TFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFR 379

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G+ P++ T  S+     +L D +    +H +IM+ G    DV + +A++D+Y+K+G + 
Sbjct: 380 DGVMPNMFTFSSVLRACERLYDLKQ---LHSWIMKVG-LESDVFVRSALIDVYSKMGELL 435

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VF  +   D + WN++I  +AQ+    EA+ +++ M        +Q T  S+L A 
Sbjct: 436 EALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVG-FPADQSTLTSVLRAC 494

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +  L  G + H  V+K     D+ +   L+DMY KCG ++DA  +F ++ +   + W+
Sbjct: 495 TSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWS 552

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +I+    +G   +ALN F  M  +G +P+HIT + +L ACSH+GLV+EG  YF  M   
Sbjct: 553 TMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNL 612

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GI P  +HYGCM+DL GRA  L      I  M   PD   W  LL ACR   N++L   
Sbjct: 613 YGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATY 672

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A+  + ++D ++ G YVL+SNIYA   +W  V EVR   + RG++K PG S IEVN ++ 
Sbjct: 673 AAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIH 732

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+++HP+ ++I  +L     ++   GYVPD +FVLQD+E +++E  L  HSE+LAI
Sbjct: 733 AFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAI 792

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
            FGI+S P +  I+I+KNL++CGDCH + K I+++ +R I++RD  R+HHF+DG+CSCGD
Sbjct: 793 VFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGD 852

Query: 819 YW 820
           YW
Sbjct: 853 YW 854



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 172/333 (51%), Gaps = 17/333 (5%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I + +L + C     +   KR+H  +  +G     F +  L+N Y     L  ++  FD 
Sbjct: 286 ITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDK 345

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
           +  RNV +W +MIS Y    +L++       F    G+ P+ +TF  VL+AC  L D K+
Sbjct: 346 MPERNVVSWTTMISAYSN-AQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ 404

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H  ++K+G E DVFV ++L+ +Y + G    A K+F +M   DS  WN++I+ + Q  +
Sbjct: 405 LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSD 464

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EAL +   MR  G   D  T+ S+L  C     +  G   H++++K   + +L ++N 
Sbjct: 465 GDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNA 522

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L++MY K G +  A  +F++M ++DV+SW+++IA   Q+   + A   F +M+  G +P+
Sbjct: 523 LLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPN 582

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            +T      I+  L  C      H  ++  GW+
Sbjct: 583 HIT------ILGVLFACS-----HAGLVNEGWY 604


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/768 (33%), Positives = 422/768 (54%), Gaps = 42/768 (5%)

Query: 86  VNFYANLGDLSFSRHTFDHISYR--NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           +  Y+  G L  ++  FD  S    ++  WNS+I+ Y+  G   E +  F +      + 
Sbjct: 163 ITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVA 222

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE----WDVFVAASLLHMYCRFGLANV 196
           P   T+  V+ AC +  +   G  +H  ++K G E    W+     SL+  Y + G    
Sbjct: 223 PTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLWN-----SLVTFYGKCGNLQH 277

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEG-VSMDPITVASILPVC 254
           A +LF+ +  +D  SWNAMI+   Q G    AL +   M ++E  V  + +T  S+L   
Sbjct: 278 ASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAV 337

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           +    +  G  IH +I +  LE +  ++N+LI  Y+K   +  A  +F++++ RD++SWN
Sbjct: 338 SGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWN 397

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ----LNDCRNSRSVHGF 370
           S++A YEQ+         F  M  +GI+PD  +L  + +  ++    L   R  + +HG+
Sbjct: 398 SMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGY 457

Query: 371 IMRR---GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           I+RR   G     + + NA++ MYAK   I  A  +F+G+  +D  SWN ++ GY++N  
Sbjct: 458 ILRRITPGGV--SLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAK 515

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSIL-PAYSHVGALRQGIKIHARVIK-----NCLCF 481
             + + +F  ++   +  P     +SIL  +   + +L+ G + HA V K     +C   
Sbjct: 516 FEDVLMIF--LDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQ 573

Query: 482 DVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
           D  ++    L+ MY KCG I DA  +F ++ R     W A+I+    HG   +AL  F +
Sbjct: 574 DSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFER 633

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M  +G++P+ +TF++LL AC+H GLV EG  YF  M  ++G+ P ++HY CM+DLFGR+G
Sbjct: 634 MKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSG 693

Query: 600 HLGMAHNFIQN-----MPVRPDA-SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
               A + ++       P   D  ++W  LLGAC     ++LG  A+ ++ E++ E+   
Sbjct: 694 QFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEAT 753

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           Y+L++N+YA+ G WE   +VR   RD+GL+K  G S I+  N+  +F  G+  HP+ ++I
Sbjct: 754 YILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEI 813

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS-SPPKSPIQ 772
           Y++L  L    + +GYVP    VL DV+E EKE IL  HSE+LA++FG+++       I+
Sbjct: 814 YEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIR 873

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + KNLRVC DCH+W KF S + +REI++RDS RFH F+DG CSCGDYW
Sbjct: 874 VMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 292/572 (51%), Gaps = 31/572 (5%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L  ++  FD+   R+V +W+++I+ Y RCG  ++A   F Q  +  GL+P+ ++   +LK
Sbjct: 71  LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLF-QKMMGEGLQPNGFSLASLLK 129

Query: 155 -ACRNLVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDS 209
            +C     G  +++H   ++ GF  D  + A+ + MY R G+   A+++FD+  +   D 
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHL 268
             WN++I+ Y   G  VE L +  +M   G V+   +T AS++  C  S     G ++H 
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249

Query: 269 YIVKHGLE-FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            I+K GLE  NL+  N+L+  Y K G ++HA ++F+++  +DVVSWN++IAA EQ  +  
Sbjct: 250 RIIKAGLEATNLW--NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGE 307

Query: 328 TAHGFFTTMQQAG--IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
            A G F  M +    +QP+ +T +SL S V+ L+  R  R +H  I R      D  I N
Sbjct: 308 NALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLS-LEVDTSITN 366

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           +++  Y+K   +  A  +FE L ++D+ISWN+++ GY QN       ++F+ M   + I 
Sbjct: 367 SLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRM-MLSGIE 425

Query: 446 PNQGTYVSILPAYSHVGA----LRQGIKIHARVIKNCL--CFDVFVATCLVDMYGKCGRI 499
           P+  +   I  A S   +     R+G +IH  +++        + V+  ++ MY K  RI
Sbjct: 426 PDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRI 485

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
            DA  +F  +    S  WNA++  +  + + +  L  F  +L +G   DH++   LLT+C
Sbjct: 486 ADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSC 545

Query: 560 SHSGLVSEGQRYFHMMQEEFGIK--PH----LKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
                +  G+++  ++ + F  +  PH    L     ++ ++ + G +  A      M  
Sbjct: 546 GRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKME- 604

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           R D   W A++  C  HG     AV + +LFE
Sbjct: 605 RKDVFSWTAMITGCAHHGL----AVEALQLFE 632



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 222/438 (50%), Gaps = 18/438 (4%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ-FTLTSGLR 143
           LV FY   G+L  +   F+ IS ++V +WN+MI+   + G    A+  F +   +   ++
Sbjct: 265 LVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQ 324

Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+  TF  +L A   L     G++IH  + +L  E D  +  SL+  Y +      AR++
Sbjct: 325 PNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREI 384

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F+ + +RD  SWN+M++GY Q+       DI   M L G+  D  ++  I    +R  + 
Sbjct: 385 FERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSG 444

Query: 261 L----SGLLIHLYIVKHGLE--FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           L     G  IH YI++       +L VSN ++ MYAKF  +  A ++F  M  RD  SWN
Sbjct: 445 LIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWN 504

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR- 373
           +++  Y ++         F  + + G   D ++L  L +   +L   +  +  H  + + 
Sbjct: 505 AMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKL 564

Query: 374 ---RGWFMEDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
              +    +D +  I NA++ MY+K G I  A  VF  +  KDV SW  +ITG A +GLA
Sbjct: 565 FNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLA 624

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVAT 487
            EA+++F+ M+  + I PNQ T++++L A +H G +++G      +  +  L   +    
Sbjct: 625 VEALQLFERMKT-DGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYA 683

Query: 488 CLVDMYGKCGRIDDAMSL 505
           C++D++G+ G+ D A SL
Sbjct: 684 CMIDLFGRSGQFDRAKSL 701



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 200/439 (45%), Gaps = 26/439 (5%)

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           ++ A ++FD    RDV+SW+++IAAY +  +   A G F  M   G+QP+  +L SL  +
Sbjct: 71  LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE--GLPVKDV 412
                +    R +HG+ +R G F  D  I  A + MY++ G++  A  VF+   L   D+
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTG-FGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           + WN++I  Y  +G   E + +F  M     + P + TY S++ A    G  + G  +H 
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
           R+IK  L     +   LV  YGKCG +  A  LF ++ R   V WNA+I+ +   G+G+ 
Sbjct: 250 RIIKAGL-EATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308

Query: 533 ALNFFRQML--DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           AL  FR+ML  +  V+P+ +TF+SLL+A S    +  G R  H       ++        
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCG-REIHAHIFRLSLEVDTSITNS 367

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL---------GAC-RIHGNMELGAVAS 640
           ++  + +   +G A    + + +R D   W ++L         G C  I   M L  +  
Sbjct: 368 LITFYSKCREVGKAREIFERLLLR-DIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEP 426

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           D        N         IY   GK     E+      R    TPG  S+ V+N +   
Sbjct: 427 DSHSLTIIFNAASRDSSGLIYFRRGK-----EIHGYILRR---ITPGGVSLSVSNAILKM 478

Query: 701 YTGNRTHPKYEKIYDELRN 719
           Y         EKI+  ++N
Sbjct: 479 YAKFNRIADAEKIFKGMKN 497



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 111/476 (23%), Positives = 219/476 (46%), Gaps = 58/476 (12%)

Query: 34  LQISPDCLENESREIDFDDLFQSCTKLHHVKRLHA-LLVVSGKIKTVFSSTKLVNFYANL 92
           L++ P    N    +         + L   + +HA +  +S ++ T  +++ L+ FY+  
Sbjct: 317 LKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNS-LITFYSKC 375

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
            ++  +R  F+ +  R++ +WNSM++ Y +  +     D F +  L SG+ PD ++   +
Sbjct: 376 REVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMML-SGIEPDSHSLTII 434

Query: 153 LKACRN-------LVDGKKIHCSVLKLGFEWDVFVAAS--LLHMYCRFGLANVARKLFDD 203
             A             GK+IH  +L+      V ++ S  +L MY +F     A K+F  
Sbjct: 435 FNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKG 494

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M  RDS SWNAM+ GY ++    + L I  ++  +G  +D ++++ +L  C R  ++  G
Sbjct: 495 MKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLG 554

Query: 264 LLIHLYIVKHGLEFN----------LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
              H  + K    FN          L ++N LI+MY+K G ++ A +VF +M  +DV SW
Sbjct: 555 KQFHAVVAKL---FNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSW 611

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
            ++I         + A   F  M+  GI+P+ +T ++L    A           HG +++
Sbjct: 612 TAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACA-----------HGGLVQ 660

Query: 374 RGWFMEDVIIGN-----------AVVDMYAKLGIINSACAVFE-GLPV-----KDVISWN 416
            G +  D +  +            ++D++ + G  + A ++ E G+ +      D+++  
Sbjct: 661 EGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLW 720

Query: 417 TLITGYAQNGLASEAIEV-FQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
            ++ G      AS+ +++  +   +  E+ P ++ TY+ +   Y+  G     IK+
Sbjct: 721 KVLLGACH---ASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKV 773



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL- 556
           R+  A  LF   P    + W+A+I+ +   G   +A   F++M+ EG++P+  +  SLL 
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN-FIQNMPVRP 615
            +CS   +    Q +   ++  FG+   ++     + ++ R G L  A   F +   +  
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIR--AAWITMYSRCGVLEDAQRVFDETSLLAL 187

Query: 616 DASIWGALLGACRIHG 631
           D  +W +++ A   HG
Sbjct: 188 DILLWNSIIAAYIFHG 203


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/689 (36%), Positives = 401/689 (58%), Gaps = 10/689 (1%)

Query: 50  FDDLFQSCTKLHHVKRLHAL---LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C  L + K +  L   +   G     F ++ L+  Y   G +      FD + 
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GK 163
            ++   WN M++ Y +CG L   +  F    +   + P+  TF  VL  C +  L+D G 
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGV 259

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+  G +++  +  SLL MY + G  + A KLF  M   D+ +WN MISGY QSG
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              E+L    EM   GV  D IT +S+LP  ++ +N+     IH YI++H +  ++F+++
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+ Y K   +  A  +F Q    DVV + ++I+ Y  +   I +   F  + +  I P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TLVS+  ++  L   +  R +HGFI+++G F     IG AV+DMYAK G +N A  +
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEI 498

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           FE L  +D++SWN++IT  AQ+   S AI++F+ M   + I  +  +  + L A +++ +
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG-VSGICYDCVSISAALSACANLPS 557

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
              G  IH  +IK+ L  DV+  + L+DMY KCG +  AM++F  +   + V WN+II+ 
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617

Query: 524 HGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            G HG+   +L  F +M+++ G+RPD ITF+ ++++C H G V EG R+F  M E++GI+
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+VDLFGRAG L  A+  +++MP  PDA +WG LLGACR+H N+EL  VAS +
Sbjct: 678 PQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSK 737

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L ++D  N GYYVL+SN +AN  +WE V +VRSL ++R ++K PG+S IE+N +  +F +
Sbjct: 738 LMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVS 797

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           G+  HP+   IY  L +L  +++  GY+P
Sbjct: 798 GDVNHPESSHIYSLLNSLLGELRLEGYIP 826



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 198/693 (28%), Positives = 351/693 (50%), Gaps = 35/693 (5%)

Query: 53  LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR- 108
           L Q+C+    L   K++HA L+V+      ++  +++  YA  G  S     F  +  R 
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 109 -NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHC 167
            ++  WNS+IS +VR G L++A+  FY   L  G+ PD  TFP ++KAC  L + K I  
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQAL-AFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159

Query: 168 ---SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
              +V  LG + + FVA+SL+  Y  +G  +V  KLFD +  +D   WN M++GY + G 
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
               +     MR++ +S + +T   +L VCA    I  G+ +H  +V  G++F   + N+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L++MY+K G    A ++F  M   D V+WN +I+ Y QS     +  FF  M  +G+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T  SL   V++  +    + +H +IMR    + D+ + +A++D Y K   ++ A  +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIF 398

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
                 DV+ +  +I+GY  NGL  +++E+F+ + +  +I+PN+ T VSILP    + AL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLAL 457

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           + G ++H  +IK        +   ++DMY KCGR++ A  +F ++ +   V WN++I+  
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
                   A++ FRQM   G+  D ++  + L+AC++    S G +  H    +  +   
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KAIHGFMIKHSLASD 576

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           +     ++D++ + G+L  A N  + M  +   S W +++ AC  HG ++        + 
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMV 635

Query: 645 E---VDSENVGYYVLMSNIYANVGKW-EGVDEVRSLARDRGLK-KTPGWSSIEVNNKVDI 699
           E   +  + + +  ++S+   +VG   EGV   RS+  D G++ +   ++ +     VD+
Sbjct: 636 EKSGIRPDQITFLEIISSC-CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV-----VDL 689

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           F    R    YE +           KS+ + PD
Sbjct: 690 FGRAGRLTEAYETV-----------KSMPFPPD 711


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/782 (33%), Positives = 421/782 (53%), Gaps = 27/782 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L ++CT L H   +HA +  +    ++F    L+  Y  LG    +R   D +  RN  +
Sbjct: 17  LLRACTSLRHAAAVHAHIARAHPAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVS 76

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           +N +I  Y R G    +++   +    +G+  D +++   L AC    +L  G+ +H   
Sbjct: 77  FNLLIDAYSREGLAPLSLETLAR-ARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALA 135

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  G    VFV+ SL+ MY + G    AR++FD    RD  SWN+++SGY ++G   E +
Sbjct: 136 ILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMV 195

Query: 230 DILDEMRLEGVSMDPITVASILPVCA-RSDNILS-GLLIHLYIVKHGLEFNLFVSNNLIN 287
            +   MR  G+ ++   + S++  C+ R D  +     +H  ++K GL+ ++F+ + +I+
Sbjct: 196 RVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMID 255

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI------TAHGFFTTMQQAGI 341
           MYAK G +  A  +F  + E +VV +N++IA + ++   I       A   ++ +Q  G+
Sbjct: 256 MYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGM 315

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           QP   T  S+             + +HG +++   F ED  IG+A++D+Y   G +    
Sbjct: 316 QPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKY-TFQEDDFIGSALIDLYFNSGCMEDGF 374

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F   P  D+++W  +++G  QN L  +A+ +F        + P+  T  S++ A + +
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAG-LKPDLFTISSVMNACASL 433

Query: 462 GALRQGIKIHARVIKNCLCFDVF--VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
              R G +I     K+   FD F  +    V MY + G +D A   F ++     V W+A
Sbjct: 434 AVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSA 491

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +ISCH  HG    AL+FF +M+D  V P+ ITF+ +LTACSH GLV EG RY+  M +++
Sbjct: 492 VISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDY 551

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           G+ P +KH  C+VDL GRAG L  A  FI N     D  IW +LL +CRIH ++E G + 
Sbjct: 552 GLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLV 611

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           ++R+ E++  +   YV++ N+Y + G+     + R L + RG+KK PG S IE+   V  
Sbjct: 612 ANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHS 671

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH-ILTSHSERLAI 758
           F  G+++HP+   IY +L  + ++++ L           D E  ++E  ++  HSE+LA+
Sbjct: 672 FVAGDKSHPESSAIYTKLEEMLSRIEKLATT--------DTEISKREQNLMNCHSEKLAV 723

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           A G+I  P  +PI++ KNLRVC DCH+  K IS+   REII+RD  RFHHF+DG CSC D
Sbjct: 724 ALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCAD 783

Query: 819 YW 820
           YW
Sbjct: 784 YW 785


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/591 (38%), Positives = 351/591 (59%), Gaps = 33/591 (5%)

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G  +H +++  GL+    V + ++  YA  G +  ++ VF+ + E   + +NS+I AY +
Sbjct: 89  GHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYAR 148

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG------- 375
                     + +M   G   D  T   +     +L      + VHG I+R G       
Sbjct: 149 YGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 208

Query: 376 -----------------------WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                                    + DV   NA++  Y K G I++A A+FE +P +++
Sbjct: 209 ATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 268

Query: 413 ISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +SW T+I+GY+Q+GLA +A+ +F +M++E + + PN  T +S+LPA + +  L +G +IH
Sbjct: 269 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 328

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS--VPWNAIISCHGIHGQ 529
               +  L  +  V   L  MY KCG + DA + F ++ R+    + WN +I+ +  +G 
Sbjct: 329 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 388

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G +A++ FR+M+  G++PD ITF  LL+ CSHSGLV  G +YF+ M   + I P ++HY 
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 448

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           C+ DL GRAG L  A   +  MP+    SIWG+LL ACR H N+E+   A+ +LF ++ E
Sbjct: 449 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 508

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
           N G YVL+SN+YA  G+W+ VD++R++ + +G KK+PG S IE+N K  +F  G+ +HP+
Sbjct: 509 NTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQ 568

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
            ++IY  L  L  KMK+ GY PD S+VL D+ E+EKE  L +HSE+LA+AFGI+++P ++
Sbjct: 569 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 628

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +++ KNLR+CGDCH    FIS+I  RE+IVRD NRFHHFK G CSCGDYW
Sbjct: 629 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 183/370 (49%), Gaps = 42/370 (11%)

Query: 25  PLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFS 81
           PL  +A     + P         + +  +FQ  T L+ +K   ++HA +++ G   T   
Sbjct: 48  PLTISATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALV 107

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
            +K+V FYA+ GD+  S   F+ I   +   +NSMI  Y R G     V  ++    + G
Sbjct: 108 GSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMH-SWG 166

Query: 142 LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
              D++TFP VLK+   L+    GK +H  +L++G ++D++VA SL+ +Y + G  N A 
Sbjct: 167 FTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAG 226

Query: 199 KLFDDMPVRDSGSWNA-------------------------------MISGYCQSGNAVE 227
           K+FD+M +RD  SWNA                               MISGY QSG A +
Sbjct: 227 KVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQ 286

Query: 228 ALDILDEMRLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           AL + DEM  E  GV  + +T+ S+LP CA+   +  G  IH    + GL  N  V   L
Sbjct: 287 ALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIAL 346

Query: 286 INMYAKFGMMRHALRVFDQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             MYAK G +  A   FD++   E+++++WN++I AY      + A   F  M QAGIQP
Sbjct: 347 TAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP 406

Query: 344 DLLTLVSLTS 353
           D +T   L S
Sbjct: 407 DDITFTGLLS 416



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 196/438 (44%), Gaps = 42/438 (9%)

Query: 144 PDFYTFPPV---LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P   ++ PV   L     L  G ++H  +L  G +    V + ++  Y   G  + +  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F+ +    S  +N+MI  Y + G A   +     M   G + D  T   +L       ++
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  +H  I++ GL+F+L+V+ +LI +Y K G +  A +VFD M  RDV SWN+++A Y
Sbjct: 188 WMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGY 247

Query: 321 EQSNDPITAHGFF-----------TTM----------QQA------------GIQPDLLT 347
            +S     A   F           TTM          QQA            G++P+ +T
Sbjct: 248 TKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVT 307

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           ++S+    AQL+     R +H    R G    +  +  A+  MYAK G +  A   F+ L
Sbjct: 308 IMSVLPACAQLSTLERGRQIHELACRMG-LNSNASVLIALTAMYAKCGSLVDARNCFDKL 366

Query: 408 --PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
               K++I+WNT+IT YA  G   +A+  F+ M +   I P+  T+  +L   SH G + 
Sbjct: 367 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAG-IQPDDITFTGLLSGCSHSGLVD 425

Query: 466 QGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISC 523
            G+K    +     +   V    C+ D+ G+ GR+ +A  L  ++P  +    W ++++ 
Sbjct: 426 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485

Query: 524 HGIHGQGDKALNFFRQML 541
              H   + A    R++ 
Sbjct: 486 CRKHRNLEMAETAARKLF 503



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 16/256 (6%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           I+ V S   L+  Y   G +  +   F+ + +RN+ +W +MIS Y + G   +A+  F +
Sbjct: 234 IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDE 293

Query: 136 FTLT-SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
                SG+RP++ T   VL AC  L     G++IH    ++G   +  V  +L  MY + 
Sbjct: 294 MVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKC 353

Query: 192 GLANVARKLFDDMPVRDSG--SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           G    AR  FD +   +    +WN MI+ Y   G+ ++A+    EM   G+  D IT   
Sbjct: 354 GSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTG 413

Query: 250 ILPVCARSDNILSGL-----LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +L  C+ S  +  GL     +   Y +   +E    V+    ++  + G +  A ++  +
Sbjct: 414 LLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVA----DLLGRAGRLAEASKLVGE 469

Query: 305 M-MERDVVSWNSIIAA 319
           M M      W S++AA
Sbjct: 470 MPMPAGPSIWGSLLAA 485



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 13/246 (5%)

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           +Y  +    + +  L+ G ++HA ++   L     V + +V  Y   G ID ++S+F  +
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
              SS+ +N++I  +  +G  ++ +  +  M   G   D+ TF  +L +      V  G 
Sbjct: 132 GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMG- 190

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
           +  H +    G++  L     ++ L+G+ G +  A     NM +R D S W ALL     
Sbjct: 191 KCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALLAGYTK 249

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV----DEVRSLARDRGLKKT 685
            G ++      +R+      N+  +  M + Y+  G  +      DE+  +  D G++  
Sbjct: 250 SGCIDAALAIFERM---PWRNIVSWTTMISGYSQSGLAQQALSLFDEM--VKEDSGVR-- 302

Query: 686 PGWSSI 691
           P W +I
Sbjct: 303 PNWVTI 308



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 11/177 (6%)

Query: 52  DLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISY- 107
            +  +C +L  ++R   +H L    G          L   YA  G L  +R+ FD ++  
Sbjct: 310 SVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369

Query: 108 -RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKK 164
            +N+  WN+MI+ Y   G   +AV  F +  + +G++PD  TF  +L  C +  LVD   
Sbjct: 370 EKNLIAWNTMITAYASYGHGLQAVSTFREM-IQAGIQPDDITFTGLLSGCSHSGLVDVGL 428

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISG 218
            + + +   +  +  V   A +  +  R G    A KL  +MP+    S W ++++ 
Sbjct: 429 KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/657 (35%), Positives = 379/657 (57%), Gaps = 7/657 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVR 122
           K +H  +V  G    +     L+N Y +      ++  F  I    ++  WN +++   +
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTK 274

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
                E ++ F++      L+PD +T+P VLKAC  L     GK +H  V+K GF  DV 
Sbjct: 275 NFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVV 334

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V +S + MY +  +   A KLFD+MP RD  SWN +IS Y Q G   +AL++ +EM++ G
Sbjct: 335 VMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSG 394

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              D +T+ +++  CAR  ++  G  IH+ +V+ G   + FVS+ L++MY K G +  A 
Sbjct: 395 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 454

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            VF+Q+  ++VVSWNS+IA Y    D  +    F  M + GI+P L TL S+    ++  
Sbjct: 455 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 514

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           + +  + +HG+I+ R     D+ + ++++D+Y K G I SA  VF+ +P  +V+SWN +I
Sbjct: 515 NLQLGKFIHGYII-RNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 573

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           +GY + G   EA+ +F  M +   + P+  T+ S+LPA S +  L +G +IH  +I++ L
Sbjct: 574 SGYVKVGSYLEALVIFTDMRKAG-VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             +  V   L+DMY KCG +D+A+ +F Q+P    V W ++I+ +G HGQ  +AL  F +
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEK 692

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M     +PD +TF+++L+ACSH+GLV EG  YF+ M  E+G KP ++HY C++DL GR G
Sbjct: 693 MQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVG 752

Query: 600 HLGMAHNFIQNMP-VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
            L  A+  +Q  P +R D  +   L  AC +H  ++LG      L E D ++   Y+++S
Sbjct: 753 RLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILS 812

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           N+YA+V KW+ V +VR   ++ GLKK PG S IEV  ++  F   +++HP+ + IY+
Sbjct: 813 NMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYE 869



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 217/435 (49%), Gaps = 11/435 (2%)

Query: 48  IDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           +    +  SC +L  ++R   +H  LV SG     F S+ LV+ Y   G L  ++  F+ 
Sbjct: 400 VTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQ 459

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVD 161
           I  +NV +WNSMI+ Y   G     ++ F +     G+RP   T   +L AC    NL  
Sbjct: 460 IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMD-EEGIRPTLTTLSSILMACSRSVNLQL 518

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK IH  +++   E D+FV +SL+ +Y + G    A  +F +MP  +  SWN MISGY +
Sbjct: 519 GKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVK 578

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G+ +EAL I  +MR  GV  D IT  S+LP C++   +  G  IH +I++  LE N  V
Sbjct: 579 VGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVV 638

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
              L++MYAK G +  AL +F+Q+ ERD VSW S+IAAY        A   F  MQQ+  
Sbjct: 639 MGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDA 698

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +PD +T +++ S  +              ++    F   V   + ++D+  ++G +  A 
Sbjct: 699 KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAY 758

Query: 402 AVFEGLP--VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
            + +  P   +DV   +TL +    +       ++ +++ E +  +P+  TY+ +   Y+
Sbjct: 759 EILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPS--TYIILSNMYA 816

Query: 460 HVGALRQGIKIHARV 474
            V    +  K+  ++
Sbjct: 817 SVKKWDEVRKVRLKI 831



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 207/385 (53%), Gaps = 9/385 (2%)

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER--DVVSWNSIIA 318
           L G LIH  IV  GL+ N+ +  +LIN+Y    + + A  VF Q +E   D+  WN ++A
Sbjct: 212 LLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF-QTIENPLDITLWNGLMA 270

Query: 319 AYEQSNDPITA-HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A  ++   I     F   +    ++PD  T  S+    + L      + VH  +++ G+ 
Sbjct: 271 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 330

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           M DV++ ++ V MYAK  +   A  +F+ +P +DV SWN +I+ Y Q+G   +A+E+F+ 
Sbjct: 331 M-DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEE 389

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M + +   P+  T  +++ + + +  L +G +IH  ++++    D FV++ LVDMYGKCG
Sbjct: 390 M-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCG 448

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            ++ A  +F Q+ R + V WN++I+ + + G     +  FR+M +EG+RP   T  S+L 
Sbjct: 449 CLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILM 508

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACS S  +  G ++ H       ++  +     ++DL+ + G++G A N  QNMP + + 
Sbjct: 509 ACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNV 566

Query: 618 SIWGALL-GACRIHGNMELGAVASD 641
             W  ++ G  ++   +E   + +D
Sbjct: 567 VSWNVMISGYVKVGSYLEALVIFTD 591


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/677 (36%), Positives = 380/677 (56%), Gaps = 37/677 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG---NAVEALDILD 233
           ++F   +LL  Y + G  +   + F+ +P RD  +WN +I GY  SG    AV+A + + 
Sbjct: 68  NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM- 126

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M+    ++  +T+ ++L + + + ++  G  IH  ++K G E  L V + L++MY+K G
Sbjct: 127 -MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 294 MMRHALRVFDQM------------------------------MERDVVSWNSIIAAYEQS 323
            +  A +VF  +                              ME+D VSW+++I    Q+
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQN 245

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                A   F  M+  G++ D     S+      L    + R +H  I+R     + + +
Sbjct: 246 GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTN-LQDHIYV 304

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           G+A++DMY K   ++ A  VF+ +  K+V+SW  ++ GY Q G A EA+++F  M+    
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG- 363

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           I+P+  T    + A +++ +L +G + H + I   L   + V+  LV +YGKCG IDD+ 
Sbjct: 364 IDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDST 423

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            LF ++     V W A++S +   G+  +A+  F +M+  G++PD +T   +++ACS +G
Sbjct: 424 RLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAG 483

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV +GQRYF +M  E+GI P   HY CM+DLF R+G +  A  FI  MP RPDA  W  L
Sbjct: 484 LVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTL 543

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           L ACR  GN+E+G  A++ L E+D  +   Y L+S+IYA+ GKW+ V ++R   +++ ++
Sbjct: 544 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVR 603

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K PG S I+   K+  F   + + P  ++IY +L  L  K+   GY PD SFV  DVEE 
Sbjct: 604 KEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEA 663

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
            K  +L  HSERLAIAFG+I  P   PI++ KNLRVC DCHN TK IS +T REI+VRD+
Sbjct: 664 VKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDA 723

Query: 804 NRFHHFKDGICSCGDYW 820
            RFH FKDG CSCGD+W
Sbjct: 724 VRFHRFKDGTCSCGDFW 740



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 238/482 (49%), Gaps = 43/482 (8%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT- 137
           +FS   L+  Y+  G LS    TF+ +  R+  TWN +I  Y   G +  AV  +     
Sbjct: 69  LFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMK 128

Query: 138 -LTSGL-RPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             +S L R    T   +  +  ++  GK+IH  V+KLGFE  + V + LL MY + G  +
Sbjct: 129 DFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCIS 188

Query: 196 VARKLF---DDMPV---------------------------RDSGSWNAMISGYCQSGNA 225
            A+K+F   DD                              +DS SW+AMI G  Q+G  
Sbjct: 189 DAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGME 248

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA++   EM++EG+ MD     S+LP C     I  G  IH  I++  L+ +++V + L
Sbjct: 249 KEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSAL 308

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I+MY K   + +A  VFD+M +++VVSW +++  Y Q+     A   F  MQ++GI PD 
Sbjct: 309 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDH 368

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            TL    S  A ++        HG  +  G  +  + + N++V +Y K G I+ +  +F 
Sbjct: 369 YTLGQAISACANISSLEEGSQFHGKAITAG-LIHYITVSNSLVTLYGKCGDIDDSTRLFN 427

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            + V+D +SW  +++ YAQ G A EAI++F  M +   + P+  T   ++ A S  G + 
Sbjct: 428 EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLG-LKPDGVTLTGVISACSRAGLVE 486

Query: 466 QGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
           +G +    +I     + +  +    +C++D++ + GRI++AM     +P R  ++ W  +
Sbjct: 487 KGQRYFELMINE---YGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTL 543

Query: 521 IS 522
           +S
Sbjct: 544 LS 545



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 209/444 (47%), Gaps = 39/444 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H  ++  G    +   + L++ Y+ +G +S ++  F  +  RN   +N+++   + C
Sbjct: 156 KQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLAC 215

Query: 124 GRLS------------------------------EAVDCFYQFTLTSGLRPDFYTFPPVL 153
           G +                               EA++CF +  +  GL+ D Y F  VL
Sbjct: 216 GMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKI-EGLKMDQYPFGSVL 274

Query: 154 KACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
            AC  L    DG++IH  +++   +  ++V ++L+ MYC+    + A+ +FD M  ++  
Sbjct: 275 PACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 334

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           SW AM+ GY Q+G A EA+ I  +M+  G+  D  T+   +  CA   ++  G   H   
Sbjct: 335 SWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKA 394

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  GL   + VSN+L+ +Y K G +  + R+F++M  RD VSW ++++AY Q    + A 
Sbjct: 395 ITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAI 454

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M Q G++PD +TL  + S  ++       +     ++     +      + ++D+
Sbjct: 455 QLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDL 514

Query: 391 YAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           +++ G I  A     G+P + D I W TL++     G         + + E +  +P   
Sbjct: 515 FSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 574

Query: 450 TYVSILPA----YSHVGALRQGIK 469
           T +S + A    +  V  LR+G+K
Sbjct: 575 TLLSSIYASKGKWDCVAQLRRGMK 598



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 207/443 (46%), Gaps = 70/443 (15%)

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           +IH  I++       F+ NN+++ YA      +A RVFD + + ++ SWN+++ AY +S 
Sbjct: 24  MIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSG 83

Query: 325 ---------------DPIT-----------------AHGFFTTMQQAGIQPDLLTLVSLT 352
                          D +T                    + T M+        +TL+++ 
Sbjct: 84  HLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTML 143

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP---- 408
            + +        + +HG +++ G F   +++G+ ++DMY+K+G I+ A  VF GL     
Sbjct: 144 KLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNT 202

Query: 409 --------------------------VKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
                                      KD +SW+ +I G AQNG+  EAIE F+ M +  
Sbjct: 203 VMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREM-KIE 261

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            +  +Q  + S+LPA   +GA+  G +IHA +I+  L   ++V + L+DMY KC  +  A
Sbjct: 262 GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYA 321

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
            ++F ++ + + V W A++  +G  G+  +A+  F  M   G+ PDH T    ++AC++ 
Sbjct: 322 KTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI 381

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
             + EG + FH      G+  ++     +V L+G+ G +  +      M VR + S W A
Sbjct: 382 SSLEEGSQ-FHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVS-WTA 439

Query: 623 LLGACRIHGNMELGAVASDRLFE 645
           ++ A    G     AV + +LF+
Sbjct: 440 MVSAYAQFGR----AVEAIQLFD 458



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 139/337 (41%), Gaps = 72/337 (21%)

Query: 356 AQLNDC------RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           AQ+  C      R+ + +HG I+R      +  + N +V  YA +     A  VF+G+P 
Sbjct: 8   AQIKQCIGLGASRHVKMIHGNIIRT-LPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 410 KDV-------------------------------ISWNTLITGYAQNGLASEAIEVFQMM 438
            ++                               ++WN LI GY+ +GL   A++ +  M
Sbjct: 67  PNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 126

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK--- 495
            +    N  + T +++L   S  G +  G +IH +VIK      + V + L+DMY K   
Sbjct: 127 MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGC 186

Query: 496 ----------------------------CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
                                       CG I+DA+ LF  + +  SV W+A+I     +
Sbjct: 187 ISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEK-DSVSWSAMIKGLAQN 245

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G   +A+  FR+M  EG++ D   F S+L AC   G +++G R  H       ++ H+  
Sbjct: 246 GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDG-RQIHACIIRTNLQDHIYV 304

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
              ++D++ +   L  A      M  +   S W A++
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVS-WTAMV 340



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L    + H   + +G I  +  S  LV  Y   GD+  S   F+ ++ R+  +W +M+
Sbjct: 382 SSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMV 441

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKKIHCSVL--KLG 173
           S Y + GR  EA+  F +  +  GL+PD  T   V+ AC    LV+  + +  ++  + G
Sbjct: 442 SAYAQFGRAVEAIQLFDKM-VQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYG 500

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGN------AV 226
                   + ++ ++ R G    A    + MP R D+  W  ++S     GN      A 
Sbjct: 501 IVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAA 560

Query: 227 EALDILDEMRLEGVSM 242
           E+L  LD     G ++
Sbjct: 561 ESLIELDPHHPAGYTL 576


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/665 (37%), Positives = 377/665 (56%), Gaps = 50/665 (7%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYC-----RFGLANVARKLFDDMPVRDSGSWNAMIS 217
           K+ H  +L+ G   D ++A SL+  Y      R+     + ++FD +   +   WN MI 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
              ++    +A+ +  EM +     +  T  ++L  C+ +  +  G+ +H ++VKHGL  
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
           +  + ++ I MYA FG +  A R+ D +  E D V WN++I  Y +  +   A   F  M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
                 PD                    RS     M   W        NA++  +++ G+
Sbjct: 231 ------PD--------------------RS-----MISTW--------NAMISGFSRCGM 251

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A   F+ +  +D ISW+ +I GY Q G   EA+E+F  M++  +I P +    S+L 
Sbjct: 252 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK-EKIRPRKFVLPSVLS 310

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A +++GAL QG  IH    +N +  D  + T LVDMY KCGRID A  +F ++       
Sbjct: 311 ACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSS 370

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WNA+I    +HG+ + A++ F +M    + P+ ITFV +L AC+H GLV +G   F+ M+
Sbjct: 371 WNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMR 427

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +E+G++P ++HYGC+VDL GRAG L  A   + ++P  P  ++WGALLGACR HGN+ELG
Sbjct: 428 KEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELG 487

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN-N 695
                 L E++ +N G Y L+SNIYA  G+WE V EVR L ++RG+K TPG S I++   
Sbjct: 488 ERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRG 547

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           +V  F  G+ +HP+ + IY  L  +  +++  GY PD S VL D++E+EKE  +  HSE+
Sbjct: 548 EVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEK 607

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAI FG+I++ P + I+I KNLRVC DCH+ TK ISQ+  REIIVRD  R+HHF++G CS
Sbjct: 608 LAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACS 667

Query: 816 CGDYW 820
           C D+W
Sbjct: 668 CKDFW 672



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 219/498 (43%), Gaps = 93/498 (18%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD---LSF--SRHTFDHISYRN 109
           Q  T LHH+K+ HAL++ +G ++  + +  LV  YAN+     LSF  S   FD +   N
Sbjct: 42  QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 101

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           V+ WN MI V +      +A+  +Y+  + +  RP+ YT+P VLKAC +   + +G ++H
Sbjct: 102 VFLWNCMIKVCIENNEPFKAILLYYEM-MVAHFRPNKYTYPAVLKACSDAGVVAEGVQVH 160

Query: 167 CSVLKLGFEWDVFVAASLLHMYC--------------------------------RFGLA 194
             ++K G   D  + +S + MY                                 RFG  
Sbjct: 161 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEV 220

Query: 195 NVARKLFDDMPVR--------------------------------DSGSWNAMISGYCQS 222
             AR+LF+ MP R                                D  SW+AMI GY Q 
Sbjct: 221 EAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQE 280

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G  +EAL+I  +M+ E +      + S+L  CA    +  G  IH Y  ++ ++ +  + 
Sbjct: 281 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 340

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L++MYAK G +  A  VF++M  ++V SWN++I           A   F+ M    I 
Sbjct: 341 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IN 397

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWFMEDVIIG-NAVVDMYAKLGI 396
           P+ +T V +      LN C +   V   +     MR+ + +E  I     +VD+  + G+
Sbjct: 398 PNEITFVGV------LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGL 451

Query: 397 INSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           +  A  V   +P +   + W  L+    ++G       V +++ E    N  + T +S +
Sbjct: 452 LTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNI 511

Query: 456 PA----YSHVGALRQGIK 469
            A    +  VG +R+ +K
Sbjct: 512 YAKAGRWEEVGEVRKLMK 529


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/659 (38%), Positives = 385/659 (58%), Gaps = 17/659 (2%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSS---TKLVNFYANLGDLSFSRHTFD 103
           +  L Q CT    + + K++HA  +  G + + +S    + L   YA  G    +R  FD
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKACRNLV-- 160
            +   ++++WN+MI +Y   G   +A+  F Q  L SG R PD YT+P V+KAC + +  
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQM-LASGRRWPDNYTYPFVIKACGDYLLP 139

Query: 161 -DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G  IH   +  GF+ D FV  SL+ MY   G   VAR++FD M  R   SWN MI+GY
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            ++G   EAL + D M  +G+  D  TV S+LPVC+    +  G  +H  +    L  ++
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V N+L++MYAK G M  A  +F +M +RDVVSW +++  Y  + D  +A      MQ  
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            ++P+ +TL S+ S  A L   ++ R +HG+ +R+     +VI+  A++DMYAK   +N 
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQK-LESEVIVETALIDMYAKCNNVNL 378

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAY 458
           +  VF     +    WN +I+G   NGL+ +AIE+F QM+ E   ++PN  T  S+LPAY
Sbjct: 379 SFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEA--VDPNDATLNSLLPAY 436

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS--VP 516
           + +  L+Q   +H  +I++     + VAT L+D+Y KCG ++ A ++F  +P+     + 
Sbjct: 437 AFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIIT 496

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W+AII+ +G+HG G+ A++ F QM+  GV+P+ ITF S+L ACSH+GLV EG   F  M 
Sbjct: 497 WSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFML 556

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           E+  +     HY C++DL GRAG L  A+  I+ M  RP+ ++WGALLG+C IH N+ELG
Sbjct: 557 EDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELG 616

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
            VA+  LFE++  N G YVL++NIY+ VG+W   + VR +  + GL+KTP  S IEV N
Sbjct: 617 EVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/769 (33%), Positives = 419/769 (54%), Gaps = 17/769 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYV 121
           +++HAL    G     F    LV+ Y   G +  +   F  I  + RN+ +WN++++   
Sbjct: 88  RQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL- 146

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDV 178
             G     ++ F    +  G   D  T   VL  C  L     G+ +H    K G++   
Sbjct: 147 -SGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPA 205

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V  +L+ MY + G    A + F + P     SWN M+  Y ++  A  A  +L +M+++
Sbjct: 206 RVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGLLRDMQIK 263

Query: 239 ---GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGM 294
               V  D ITV S+LP C+    +     +H + V+ GL+  +  V N L+  Y + G 
Sbjct: 264 EHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGR 323

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           + HA RVF  +  + V SWN++I+A+ Q N       F       G++PD  ++ SL   
Sbjct: 324 LLHADRVFTDIRRKTVSSWNTLISAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMA 383

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS-ACAVFEGLPVKDVI 413
            A      + ++ HGFI+R G    D +I  +++  Y +       A  +F+ +  K  +
Sbjct: 384 CADPKHLLHVKATHGFILRNG-LERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEV 442

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
            W  +I+GY+QNGL  E++++F+ M+       +  +  S L A S + ++R G ++H  
Sbjct: 443 LWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCF 502

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV-PRSSSVPWNAIISCHGIHGQGDK 532
            +K  LC D F+++ L+DMY KCG ++DA + F ++  R + V W A+I+ + ++G G +
Sbjct: 503 ALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGRE 562

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF-HMMQEEFGIKPHLKHYGCM 591
           A+  + +M  EG+ PD  T++ LL AC H+G++ EG R+F  M      I+  L+HY C+
Sbjct: 563 AVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCV 622

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           + +  RAG    A   +  MP  PDA I  ++L AC IHG  ELG+  ++RL E++ +  
Sbjct: 623 IGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKA 682

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
            +YVL SN+YA   +W+ + +VR + RD G+ K PG S I+V  KV  F  G   HP+ E
Sbjct: 683 EHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEME 742

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           ++    R+L  +++ +GYVPD + VL ++EE+EK   L  HSE+ A+ FG++ +   + +
Sbjct: 743 QVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPATV 802

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++FKN+R+C DCHN  + IS++T R+I+VRD  RFHHF+ GICSCGDYW
Sbjct: 803 RVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 247/534 (46%), Gaps = 22/534 (4%)

Query: 113 WNSMISVYVRCGR-LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL-----VDGKKIH 166
           WN++++ + R GR              + G+ PD +T PP  ++C  L       G+++H
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP--VRDSGSWNAMISGYCQSGN 224
               KLG   D FV  SL+ MY R G    A K+F  +P   R+  SWNA+++    SG+
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL--SGD 149

Query: 225 AVEALDIL-DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               L++  D +   G  +D  T+ ++LP+CA      +G  +H    K G +    V N
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGN 209

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ---QAG 340
            L++MYAK G +  A R F +     VVSWN ++ AY ++ +   A G    MQ      
Sbjct: 210 ALVDMYAKCGELADAERAFPEA--PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGS 267

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           +  D +T++S+    +   +    R +H F +RRG       + NA+V  Y + G +  A
Sbjct: 268 VPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHA 327

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  +  K V SWNTLI+ +AQ   A+ AIE+F  M     + P+  +  S+L A + 
Sbjct: 328 DRVFTDIRRKTVSSWNTLISAHAQQNTAA-AIELFIQMTNACGLKPDGFSIGSLLMACAD 386

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD-AMSLFYQVPRSSSVPWNA 519
              L      H  +++N L  D  +   L+  Y +C R +  A  LF  +     V W A
Sbjct: 387 PKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIA 446

Query: 520 IISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQE 577
           +IS +  +G   ++L  FR+M   EG     I+  S L ACS    V  G+  +   ++ 
Sbjct: 447 MISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKA 506

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +    P L     ++D++ + G +  A  F   +  R     W A++    ++G
Sbjct: 507 DLCDDPFLS--SSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNG 558



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPA-----YSHVGALRQGI 468
           WN L+  +++ G  ++A+ +   +   +E I P++ T   + PA     +  VGA   G 
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFT---LPPAARSCGFLRVGAAAAGR 88

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS--VPWNAIISCHGI 526
           ++HA   K  L  D FV   LV MYG+CGR++DA  +F  +P ++   V WNA+++   +
Sbjct: 89  QVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA--AL 146

Query: 527 HGQGDKALNFFRQ-MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            G   + L  FR  ++  G   D  T V++L  C+  G  SE  R  H +  + G     
Sbjct: 147 SGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGW-SETGRAVHGLAAKSGWDAPA 205

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +    +VD++ + G L  A    +  P  P    W  +LGA     N E GA 
Sbjct: 206 RVGNALVDMYAKCGELADAE---RAFPEAPSVVSWNVMLGA--YTRNREAGAA 253


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/692 (36%), Positives = 402/692 (58%), Gaps = 18/692 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRNVYTWNSMI 117
           L+++   H   +  G+   ++++  +++ Y     G L+F+ + FD +S+R+  TWN+MI
Sbjct: 15  LYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMI 74

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK----ACRNLVDGKKIHCSVLKLG 173
           S YV  G L  A +  Y+   + GL PD YTF  +LK    ACR L  G+++H  ++K+G
Sbjct: 75  SGYVNSGSLGSAWE-LYKSMKSFGLMPDAYTFGSILKGVACACR-LDVGQQVHSLIVKMG 132

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           +E  V+  ++LL MY +      A  +F  +P R+S SWNA+I+G+   G+   A  +L 
Sbjct: 133 YEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLR 192

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M  EGV +D  T + +L +          + +H  I+KHG++F+  V N  I  Y++ G
Sbjct: 193 CMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCG 252

Query: 294 MMRHALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
            +  A RVFD  +  RD+V+WNS++AA+   +   TA   F  MQQ G +PD+ T    T
Sbjct: 253 SLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTY---T 309

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMY--AKLGIINSACAVFEGLPV 409
           +I++  +   N +S+HG +++RG  +E ++ I NAV+ MY  +    +  A  VF  +  
Sbjct: 310 TIISACSHKDNGKSLHGLVIKRG--LEQLVPICNAVIAMYLESSSNSMEDALNVFHSMES 367

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD +SWN+++TG++Q G +  A+++F  M     ++ +   + ++L + S +  L+ G +
Sbjct: 368 KDRVSWNSILTGFSQTGHSENALKLFVHMRFA-VVDIDHYAFSAVLRSCSDLATLQLGQQ 426

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           IH   +K+    + FVA+ L+ MY KCG I+DA   F +  + SS+ WN+I+  +  HGQ
Sbjct: 427 IHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQ 486

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           GD AL  F QM D+ V+ DHITFV+ LTACSH GLV +G+     M  ++GI P ++HY 
Sbjct: 487 GDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYA 546

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           C VDLFGRAG+L  A   I++MP  PDA +W  LLGACR  G++EL A  +  L E++ E
Sbjct: 547 CAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPE 606

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
               YV++SN+Y ++ +W+    +  L R+R +KK PGWS IEV N+V  F   +R H  
Sbjct: 607 EHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSH 666

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +E+IY  L  L   +K L  V     +L DV+
Sbjct: 667 FEEIYQILEQLMEDIKWLDSVAGSDSLLDDVD 698


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/598 (38%), Positives = 359/598 (60%), Gaps = 41/598 (6%)

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           +S ++   L IH  +++ GL  N  ++  L   YA  G +  ++ VF+   E +V S+++
Sbjct: 56  KSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSA 115

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC--RNSRSVHGFIMR 373
           II ++ QS     A G+++ M   G++P+  T  S+      L  C   + + +H   ++
Sbjct: 116 IIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSV------LKSCSLESGKVLHCQAIK 169

Query: 374 RGWFMEDVIIGNAVVDMYA-------------------------------KLGIINSACA 402
            G    D+ +   +VD+YA                               K+G ++ A +
Sbjct: 170 LG-LGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARS 228

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +FEG+  +DV+ WN +I GYAQ+G+ +E++++F+ M     I PN+ T +++L A   +G
Sbjct: 229 LFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVTVLAVLSACGQLG 287

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G  IH+ +    +  +V V T L+DMY KCG ++DA  +F ++     V WN++I 
Sbjct: 288 ALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIV 347

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            + +HG    AL  F +M + G +P  ITF+ +L+AC H GLV EG+ +F +M++++GI+
Sbjct: 348 GYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIE 407

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HYGCMV+L GRAGHL  A+  ++NM +  D  +WG LLG CR+H N++LG   +  
Sbjct: 408 PKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKF 467

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L +    N G YVL+SN+YA  G WEGV ++R+L ++ G++K  G SSIEV+NKV  F  
Sbjct: 468 LVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVA 527

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G R HPK ++IY  L  + + +K+ GY P    VL D+ E++KE  L  HSE+LAIAFG+
Sbjct: 528 GERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGL 587

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ P + ++I KNLRVC DCH   K IS+IT R+I++RD NRFHHF+DG+CSCGDYW
Sbjct: 588 ISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 204/448 (45%), Gaps = 42/448 (9%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  L      + H+ ++HA L+  G       + KL   YA LG L  S   F+     N
Sbjct: 50  FASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPN 109

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSV 169
           V++++++I  +V+  RL +    +Y   L+ G+ P+ +TF  VLK+C +L  GK +HC  
Sbjct: 110 VFSFSAIIHSHVQ-SRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC-SLESGKVLHCQA 167

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP------------------------ 205
           +KLG   D++V   L+ +Y R G    AR+LFD MP                        
Sbjct: 168 IKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKAR 227

Query: 206 -------VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
                   RD   WN MI GY QSG   E+L +   M +     + +TV ++L  C +  
Sbjct: 228 SLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLG 287

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            + SG  IH YI   G++ N+ V   LI+MY+K G +  A  VFD++ ++DVV+WNS+I 
Sbjct: 288 ALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIV 347

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y        A   F  M + G +P  +T + + S           RS    +MR  + +
Sbjct: 348 GYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFR-LMRDKYGI 406

Query: 379 EDVIIG-NAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLI--TGYAQNGLASEAIEV 434
           E  I     +V++  + G +  A  + + + +  D + W TL+       N    E I  
Sbjct: 407 EPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAK 466

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVG 462
           F + ++      N GTYV +   Y+  G
Sbjct: 467 FLVDQKL----ANSGTYVLLSNMYAATG 490



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 46/476 (9%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           F  ++   +++    +IH S+L+ G   +  +   L   Y   G  + +  +F+     +
Sbjct: 50  FASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPN 109

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             S++A+I  + QS     A     +M   GV  +  T +S+L  C+    + SG ++H 
Sbjct: 110 VFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHC 165

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME--------------------- 307
             +K GL  +L+V   L+++YA+ G +  A ++FD+M E                     
Sbjct: 166 QAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDK 225

Query: 308 ----------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
                     RDVV WN +I  Y QS  P  +   F  M  A   P+ +T++++ S   Q
Sbjct: 226 ARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQ 285

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L    + R +H +I  +G    +V +G A++DMY+K G +  A  VF+ +  KDV++WN+
Sbjct: 286 LGALESGRWIHSYIENKG-IQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNS 344

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I GYA +G +  A+++F+ M E     P   T++ IL A  H G + +G +   R++++
Sbjct: 345 MIVGYAMHGFSQHALQLFEEMTETGH-KPTDITFIGILSACGHGGLVEEG-RSFFRLMRD 402

Query: 478 CLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSS-VPWNAIISCHGIHGQGDKAL 534
               +  +    C+V++ G+ G +++A  L   +  ++  V W  ++ C  +H       
Sbjct: 403 KYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGE 462

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
              + ++D+ +  +  T+V L    + +G   EG      + +E GI+   K +GC
Sbjct: 463 EIAKFLVDQKL-ANSGTYVLLSNMYAATG-NWEGVAKMRTLMKEHGIE---KEHGC 513


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/683 (36%), Positives = 397/683 (58%), Gaps = 11/683 (1%)

Query: 53  LFQSCTKLH--HVKRL-HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + +SC  L   H+ RL H      G  + ++  + L+  YA+ G L  +R  FD +  R+
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
              WN M+  YV+ G ++ AV  F +    SG  P+F T    L  C    +L+ G ++H
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLF-RVMRASGCDPNFATLACFLSVCAAEADLLSGVQLH 271

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K G E +V VA +L+ MY +      A +LF  MP  D  +WN MISG  Q+G   
Sbjct: 272 TLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVD 331

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +AL +  +M+  G+  D +T+AS+LP     +    G  IH YIV++    ++F+ + L+
Sbjct: 332 DALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALV 391

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           ++Y K   +R A  VFD     DVV  +++I+ Y  +     A   F  +   GI+P+ +
Sbjct: 392 DIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAV 451

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
            + S     A +   R  + +HG++++   +     + +A++DMY+K G ++ +  +F  
Sbjct: 452 MVASTLPACASMAAMRIGQELHGYVLKNA-YEGRCYVESALMDMYSKCGRLDLSHYMFSK 510

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +  KD ++WN++I+ +AQNG   EA+++F QM+ E   +  N  T  SIL A + + A+ 
Sbjct: 511 MSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIME--GVKYNNVTISSILSACAGLPAIY 568

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G +IH  +IK  +  D+F  + L+DMYGKCG ++ A+ +F  +P  + V WN+IIS +G
Sbjct: 569 YGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYG 628

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG   ++++    M +EG + DH+TF++L++AC+H+G V EG R F  M EE+ I+P +
Sbjct: 629 AHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQV 688

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +H  CMVDL+ RAG L  A  FI +MP +PDA IWGALL ACR+H N+EL  +AS  LF+
Sbjct: 689 EHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 748

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +D  N GYYVLMSNI A  G+W+GV ++R L +D+ ++K PG+S ++VNN   +F   ++
Sbjct: 749 LDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADK 808

Query: 706 THPKYEKIYDELRNLTAKMKSLG 728
            HP  E+IY  L++L  ++K  G
Sbjct: 809 NHPDSEEIYMSLKSLIIELKQEG 831



 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 190/595 (31%), Positives = 316/595 (53%), Gaps = 21/595 (3%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKTVFS-----STKLVNFYA---NLGDLSFSRHT 101
           L + C    H+    R+HA  V SG +           T+LV  Y       D      +
Sbjct: 42  LLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSS 101

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY--QFTLTSGLRPDFYTFPPVLKACRNL 159
               +      WN +I  +   G    AV  FY   +   S  RPD +T P V+K+C  L
Sbjct: 102 LPRAAAAAALPWNWLIRGFTMAGHHRLAV-LFYVKMWAHPSSPRPDGHTLPYVVKSCAAL 160

Query: 160 VD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
                G+ +H +   LG + D++V ++L+ MY   GL + AR++FD M  RD   WN M+
Sbjct: 161 GALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMM 220

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
            GY ++G+   A+ +   MR  G   +  T+A  L VCA   ++LSG+ +H   VK+GLE
Sbjct: 221 DGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLE 280

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + V+N L++MYAK   +  A R+F  M   D+V+WN +I+   Q+     A   F  M
Sbjct: 281 PEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDM 340

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q++G+QPD +TL SL   + +LN  +  + +HG+I+R    + DV + +A+VD+Y K   
Sbjct: 341 QKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHV-DVFLVSALVDIYFKCRD 399

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A  VF+     DV+  +T+I+GY  N ++  A+++F+ +     I PN     S LP
Sbjct: 400 VRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALG-IKPNAVMVASTLP 458

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A + + A+R G ++H  V+KN      +V + L+DMY KCGR+D +  +F ++     V 
Sbjct: 459 ACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVT 518

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WN++IS    +G+ ++AL+ FRQM+ EGV+ +++T  S+L+AC+    +  G+   H + 
Sbjct: 519 WNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKE-IHGII 577

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            +  I+  L     ++D++G+ G+L +A    ++MP + + S W +++ A   HG
Sbjct: 578 IKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS-WNSIISAYGAHG 631



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 220/426 (51%), Gaps = 8/426 (1%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI--TVASILPVCARSDNILSGLLIHLY 269
           WN +I G+  +G+   A+    +M     S  P   T+  ++  CA    +  G L+H  
Sbjct: 113 WNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRT 172

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
               GL+ +++V + LI MYA  G++  A  VFD M ERD V WN ++  Y ++ D  +A
Sbjct: 173 TRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASA 232

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
            G F  M+ +G  P+  TL    S+ A   D  +   +H   ++ G    +V + N +V 
Sbjct: 233 VGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYG-LEPEVAVANTLVS 291

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYAK   +  A  +F  +P  D+++WN +I+G  QNGL  +A+ +F  M++ + + P+  
Sbjct: 292 MYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQK-SGLQPDSV 350

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T  S+LPA + +   +QG +IH  +++NC   DVF+ + LVD+Y KC  +  A ++F   
Sbjct: 351 TLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDAT 410

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
                V  + +IS + ++   + A+  FR +L  G++P+ +   S L AC+    +  GQ
Sbjct: 411 KSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQ 470

Query: 570 R-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
             + ++++  +  + +++    ++D++ + G L ++H     M  + D   W +++ +  
Sbjct: 471 ELHGYVLKNAYEGRCYVE--SALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMISSFA 527

Query: 629 IHGNME 634
            +G  E
Sbjct: 528 QNGEPE 533


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/782 (33%), Positives = 421/782 (53%), Gaps = 27/782 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L ++CT L H   +HA +  +    ++F    L+  Y  LG    +R   D +  RN  +
Sbjct: 17  LLRACTSLRHAAAVHAHIARAHPAASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVS 76

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           +N +I  Y R G    +++   +    +G+  D +++   L AC    +L  G+ +H   
Sbjct: 77  FNLLIDAYSREGLAPLSLETLAR-ARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALA 135

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +  G    VFV+ SL+ MY + G    AR++FD    RD  SWN+++SGY ++G   E +
Sbjct: 136 ILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMV 195

Query: 230 DILDEMRLEGVSMDPITVASILPVCA-RSDNILS-GLLIHLYIVKHGLEFNLFVSNNLIN 287
            +   MR  G+ ++   + S++  C+ R D  +     +H  ++K GL+ ++F+ + +I+
Sbjct: 196 RVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMID 255

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI------TAHGFFTTMQQAGI 341
           MYAK G +  A  +F  + E +VV +N++IA + ++   I       A   ++ +Q  G+
Sbjct: 256 MYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGM 315

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           QP   T  S+             + +HG +++   F ED  IG+A++D+Y   G +    
Sbjct: 316 QPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKY-TFQEDDFIGSALIDLYFNSGCMEDGF 374

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F   P  D+++W  +++G  QN L  +A+ +F        + P+  T  S++ A + +
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAG-LKPDLFTISSVMNACASL 433

Query: 462 GALRQGIKIHARVIKNCLCFDVF--VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
              R G +I     K+   FD F  +    V MY + G +D A   F ++     V W+A
Sbjct: 434 AVARAGEQIQCFATKSG--FDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSA 491

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +ISCH  HG    AL+FF +M+D  V P+ ITF+ +LTACSH GLV EG RY+  M +++
Sbjct: 492 VISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDY 551

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           G+ P +KH  C+VDL GRAG L  A  FI N     D  IW +LL +CRIH ++E G + 
Sbjct: 552 GLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLV 611

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           ++R+ E++  +   YV++ N+Y + G+     + R L + RG+KK PG S IE+   V  
Sbjct: 612 ANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHS 671

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH-ILTSHSERLAI 758
           F  G+++HP+   IY +L  + ++++ L           D E  ++E  ++  HSE+LA+
Sbjct: 672 FVAGDKSHPESSAIYTKLEEMLSRIEKLATT--------DTEISKREQNLMNCHSEKLAV 723

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           A G+I  P  +PI++ KNLRVC DCH+  K IS+   REII+RD  RFHHF+DG CSC D
Sbjct: 724 ALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKSENREIILRDPIRFHHFRDGSCSCAD 783

Query: 819 YW 820
           YW
Sbjct: 784 YW 785


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/667 (36%), Positives = 390/667 (58%), Gaps = 5/667 (0%)

Query: 157 RNLVDGKKIHCSVL--KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
           +NL  GK IH  ++      + ++    SL+++Y +     VAR LFD M  R+  SW A
Sbjct: 39  KNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGA 98

Query: 215 MISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           +++GY  +G  +E L +   M  ++ +  +    A+I+  C+ S  ++ G   H Y +K 
Sbjct: 99  LMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKS 158

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           GL F+ +V N LI MY++   ++ A+ V+ ++   DV S+N II    ++  P  A    
Sbjct: 159 GLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVL 218

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
             M    I  D +T V+   + + L D R    VH  + R G    D  + +A++DMY K
Sbjct: 219 DRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTG-AEYDSFVSSAIIDMYGK 277

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G I +A  VF  L  K+V+SW  ++  Y+QNG   EA+  F  ME  + + PN+ T+  
Sbjct: 278 CGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEME-VDGLLPNEYTFAV 336

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +L + + + AL  G  +H R+ K+     + V   L++MY K G I+ A  +F ++    
Sbjct: 337 LLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRD 396

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
           S+ W+A+I     HG G +AL  F++ML     P ++TFV +L+AC+H G V EG  Y +
Sbjct: 397 SITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLN 456

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            + ++ GI+P ++HY C+V L  +AG L  A NF+++ PV+ D   W  LL AC +H N 
Sbjct: 457 QLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNY 516

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
            LG   ++ + ++D  +VG Y+L+SN+YA   +W+GV ++R L R+R +KK PG S IE+
Sbjct: 517 GLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEI 576

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            N + +F +  +THP+  +IY++++ L   ++ +GYVPD + V  DVE+++K   ++ HS
Sbjct: 577 RNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHS 636

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LAIA+G++ +P  +PI++ KNLR+C DCH+  K IS++T R IIVRD+NRFH F DG 
Sbjct: 637 EKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGG 696

Query: 814 CSCGDYW 820
           CSC DYW
Sbjct: 697 CSCADYW 703



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 260/487 (53%), Gaps = 12/487 (2%)

Query: 64  KRLHALLVVSGKIK--TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           K +HA L+++ +     +     L+N YA    +  +R  FD +  RNV +W ++++ Y 
Sbjct: 45  KMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYF 104

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDV 178
             G + E +  F        +RP+ Y F  ++ +C +   +V+G + H   LK G  +  
Sbjct: 105 HNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQ 164

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           +V  +L+ MY R      A  ++ ++P  D  S+N +I+G  ++G   EAL++LD M  E
Sbjct: 165 YVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDE 224

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
            +  D +T  +   +C+   ++  GL +H  + + G E++ FVS+ +I+MY K G + +A
Sbjct: 225 CIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNA 284

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            +VF+++  ++VVSW +I+AAY Q+     A  FF  M+  G+ P+  T   L +  A +
Sbjct: 285 RKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGI 344

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +   + + +H  I + G F + +I+GNA+++MY+K G I +A  VF  +  +D I+W+ +
Sbjct: 345 SALGHGKLLHTRIKKSG-FEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAM 403

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G + +GL  EA+ VFQ M    E  P+  T+V +L A +H+G++++G     +++K  
Sbjct: 404 ICGLSHHGLGREALVVFQEMLAAKEC-PHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQT 462

Query: 479 -LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH---GQGDKA 533
            +   V   TC+V +  K GR+D+A +     P +   V W  ++S   +H   G G K 
Sbjct: 463 GIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKV 522

Query: 534 LNFFRQM 540
                QM
Sbjct: 523 AELVLQM 529



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 9/180 (5%)

Query: 47  EIDFDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F  L  SC   + L H K LH  +  SG    +     L+N Y+  G +  +   F 
Sbjct: 331 EYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFL 390

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            +  R+  TW++MI      G   EA+  F Q  L +   P + TF  VL AC +L   +
Sbjct: 391 EMICRDSITWSAMICGLSHHGLGREALVVF-QEMLAAKECPHYVTFVGVLSACAHLGSVQ 449

Query: 164 K----IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
           +    ++  + + G E  V     ++ + C+ G  + A       PV+ D  +W  ++S 
Sbjct: 450 EGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/665 (37%), Positives = 377/665 (56%), Gaps = 50/665 (7%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYC-----RFGLANVARKLFDDMPVRDSGSWNAMIS 217
           K+ H  +L+ G   D ++A SL+  Y      R+     + ++FD +   +   WN MI 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
              ++    +A+ +  EM +     +  T  ++L  C+ S  +  G+ +H ++VKHGL  
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
           +  + ++ I MYA FG +  A R+ D +  E D V WN++I  Y +  +   A   F  M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
                 PD                    RS     M   W        NA++  +++ G+
Sbjct: 232 ------PD--------------------RS-----MISTW--------NAMISGFSRCGM 252

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A   F+ +  +D ISW+ +I GY Q G   EA+E+F  M++  +I P +    S+L 
Sbjct: 253 VEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK-EKIRPRKFVLPSVLS 311

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A +++GAL QG  IH    +N +  D  + T LVDMY KCGRID A  +F ++       
Sbjct: 312 ACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSS 371

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           WNA+I    +HG+ + A++ F +M    + P+ ITFV +L AC+H GLV +G   F+ M+
Sbjct: 372 WNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMR 428

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           +E+G++P ++HYGC+VDL GRAG L  A   + ++P  P  ++WGALLGACR HGN+ELG
Sbjct: 429 KEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELG 488

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN-N 695
                 L E++ +N G Y L+SNIYA  G+WE V EVR L ++RG+K TPG S I++   
Sbjct: 489 ERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRG 548

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           +V  F  G+ +HP+ + IY  L  +  +++  GY PD S VL D++E+EKE  +  HSE+
Sbjct: 549 EVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEK 608

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAI FG+I++ P + I+I KNLRVC DCH+ TK ISQ+  REIIVRD  R+HHF++G CS
Sbjct: 609 LAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACS 668

Query: 816 CGDYW 820
           C D+W
Sbjct: 669 CKDFW 673



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 218/498 (43%), Gaps = 93/498 (18%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD---LSF--SRHTFDHISYRN 109
           Q  T LHH+K+ HAL++ +G ++  + +  LV  YAN+     LSF  S   FD +   N
Sbjct: 43  QCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPN 102

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           V+ WN MI V +      +A+  +Y+  +    RP+ YT+P VLKAC +   + +G ++H
Sbjct: 103 VFLWNCMIKVCIENNEPFKAILLYYEMVVAHS-RPNKYTYPAVLKACSDSGVVAEGVQVH 161

Query: 167 CSVLKLGFEWDVFVAASLLHMYC--------------------------------RFGLA 194
             ++K G   D  + +S + MY                                 RFG  
Sbjct: 162 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEV 221

Query: 195 NVARKLFDDMPVR--------------------------------DSGSWNAMISGYCQS 222
             AR+LF+ MP R                                D  SW+AMI GY Q 
Sbjct: 222 EAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQE 281

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G  +EAL+I  +M+ E +      + S+L  CA    +  G  IH Y  ++ ++ +  + 
Sbjct: 282 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 341

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L++MYAK G +  A  VF++M  ++V SWN++I           A   F+ M    I 
Sbjct: 342 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IY 398

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWFMEDVIIG-NAVVDMYAKLGI 396
           P+ +T V +      LN C +   V   +     MR+ + +E  I     +VD+  + G+
Sbjct: 399 PNEITFVGV------LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGL 452

Query: 397 INSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           +  A  V   +P +   + W  L+    ++G       V +++ E    N  + T +S +
Sbjct: 453 LTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNI 512

Query: 456 PA----YSHVGALRQGIK 469
            A    +  VG +R+ +K
Sbjct: 513 YAKAGRWEEVGEVRKLMK 530


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/662 (37%), Positives = 374/662 (56%), Gaps = 5/662 (0%)

Query: 162 GKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+ +H  ++K L      F+A  L++MY +      AR +    P R+  SW ++ISG  
Sbjct: 25  GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+G+   AL    EMR EGV  +  T        A     ++G  IH   VK G   ++F
Sbjct: 85  QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +  +MY K  +   A ++FD++ ER++ +WN+ I+       P  A   F   ++  
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             P+ +T  +  +  +          +HG ++R G F  DV + N ++D Y K   I S+
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCKQIRSS 263

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +F  +  K+ +SW +L+  Y QN    E   V  +    + +  +     S+L A + 
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNH-EDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +  L  G  IHA  +K C+   +FV + LVDMYGKCG I+D+   F ++P  + V  N++
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGV--RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           I  +   GQ D AL  F +M   G    P+++TFVSLL+ACS +G V  G + F  M+  
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GI+P  +HY C+VD+ GRAG +  A+ FI+ MP++P  S+WGAL  ACR+HG  +LG +
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL 502

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
           A++ LF++D ++ G +VL+SN +A  G+W   + VR   +  G+KK  G+S I V N+V 
Sbjct: 503 AAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVH 562

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F   +R+H   ++I   L  L  +M++ GY PD    L D+EE+EK   ++ HSE+LA+
Sbjct: 563 AFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLAL 622

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG++S P   PI+I KNLR+CGDCH++ KF+S   +REIIVRD+NRFH FKDGICSC D
Sbjct: 623 AFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682

Query: 819 YW 820
           YW
Sbjct: 683 YW 684



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 244/500 (48%), Gaps = 36/500 (7%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F +  L+N Y+ L     +R        RNV +W S+IS   + G  S A+  F++    
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR-R 101

Query: 140 SGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            G+ P+ +TFP   KA  +L   V GK+IH   +K G   DVFV  S   MYC+  L + 
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           ARKLFD++P R+  +WNA IS     G   EA++   E R      + IT  + L  C+ 
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
             ++  G+ +H  +++ G + ++ V N LI+ Y K   +R +  +F +M  ++ VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           +AAY Q+++   A   +   ++  ++     + S+ S  A +      RS+H   + +  
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KAC 340

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
               + +G+A+VDMY K G I  +   F+ +P K++++ N+LI GYA  G    A+ +F+
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400

Query: 437 MMEE--CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT------- 487
            M    C    PN  T+VS+L A S  GA+  G+KI          FD   +T       
Sbjct: 401 EMAPRGCGP-TPNYMTFVSLLSACSRAGAVENGMKI----------FDSMRSTYGIEPGA 449

Query: 488 ----CLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKAL----NFFR 538
               C+VDM G+ G ++ A     ++P   ++  W A+ +   +HG+    L    N F+
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509

Query: 539 QMLDEGVRPDHITFVSLLTA 558
             LD     +H+   +   A
Sbjct: 510 --LDPKDSGNHVLLSNTFAA 527



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 9/362 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++HAL V  G+I  VF      + Y        +R  FD I  RN+ TWN+ IS  V  
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           GR  EA++ F +F    G  P+  TF   L AC + +    G ++H  VL+ GF+ DV V
Sbjct: 188 GRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              L+  Y +      +  +F +M  +++ SW ++++ Y Q+    +A  +    R + V
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                 ++S+L  CA    +  G  IH + VK  +E  +FV + L++MY K G +  + +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQL 358
            FD+M E+++V+ NS+I  Y        A   F  M  +  G  P+ +T VSL S  ++ 
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKDVIS-WN 416
               N   +    MR  + +E      + +VDM  + G++  A    + +P++  IS W 
Sbjct: 427 GAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485

Query: 417 TL 418
            L
Sbjct: 486 AL 487


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/643 (36%), Positives = 370/643 (57%), Gaps = 8/643 (1%)

Query: 184  LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
            L+ MYC+     +A K+FD MP R+  SW+A++SG+  +G+   +L +  EM  +G+  +
Sbjct: 418  LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 477

Query: 244  PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
              T ++ L  C   + +  GL IH + +K G E  + V N+L++MY+K G +  A +VF 
Sbjct: 478  EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 537

Query: 304  QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ--PDLLTLVSLTSIVAQLNDC 361
            ++++R ++SWN++IA +  +     A   F  MQ+A I+  PD  TL SL    +     
Sbjct: 538  RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597

Query: 362  RNSRSVHGFIMRRGWFM-EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + +HGF++R G+       I  ++VD+Y K G + SA   F+ +  K +ISW++LI 
Sbjct: 598  YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 657

Query: 421  GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            GYAQ G   EA+ +F+ ++E N    +     SI+  ++    LRQG ++ A  +K    
Sbjct: 658  GYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 716

Query: 481  FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             +  V   +VDMY KCG +D+A   F ++     + W  +I+ +G HG G K++  F +M
Sbjct: 717  LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 776

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            L   + PD + ++++L+ACSHSG++ EG+  F  + E  GIKP ++HY C+VDL GRAG 
Sbjct: 777  LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 836

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A + I  MP++P+  IW  LL  CR+HG++ELG      L  +D++N   YV+MSN+
Sbjct: 837  LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNL 896

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            Y   G W      R L   +GLKK  G S +E+  +V  F +G  +HP    I + L+  
Sbjct: 897  YGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEA 956

Query: 721  TAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS---SPPKSPIQIFKN 776
              +++  LGYV      L D++++ KE  L +HSE+LAI   + +   +     I++FKN
Sbjct: 957  ERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKN 1016

Query: 777  LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
            LRVC DCH + K +S+IT+   +VRD+ RFH F+DG CSCGDY
Sbjct: 1017 LRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 248/459 (54%), Gaps = 12/459 (2%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           + +S  L++ Y    +   +   FD +  RNV +W++++S +V  G L  ++  F +   
Sbjct: 412 LITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG- 470

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             G+ P+ +TF   LKAC     L  G +IH   LK+GFE  V V  SL+ MY + G  N
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPV 253
            A K+F  +  R   SWNAMI+G+  +G   +ALD    M+   +   P   T+ S+L  
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590

Query: 254 CARSDNILSGLLIHLYIVKHGLE--FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           C+ +  I +G  IH ++V+ G     +  ++ +L+++Y K G +  A + FDQ+ E+ ++
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SW+S+I  Y Q  + + A G F  +Q+   Q D   L S+  + A     R  + +    
Sbjct: 651 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 710

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           ++    +E  ++ N+VVDMY K G+++ A   F  + +KDVISW  +ITGY ++GL  ++
Sbjct: 711 VKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLV 490
           + +F  M   N I P++  Y+++L A SH G +++G ++ +++++ + +   V    C+V
Sbjct: 770 VRIFYEMLRHN-IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHG 528
           D+ G+ GR+ +A  L   +P   +V  W  ++S   +HG
Sbjct: 829 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 867



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 205/416 (49%), Gaps = 16/416 (3%)

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            NL  SN LI+MY K      A +VFD M ER+VVSW+++++ +  + D   +   F+ M
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            + GI P+  T  +       LN       +HGF ++ G+ M  V +GN++VDMY+K G 
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM-VEVGNSLVDMYSKCGR 528

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN-EINPNQGTYVSIL 455
           IN A  VF  +  + +ISWN +I G+   G  S+A++ F MM+E N +  P++ T  S+L
Sbjct: 529 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 588

Query: 456 PAYSHVGALRQGIKIHARVIKNCL-C-FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
            A S  G +  G +IH  ++++   C     +   LVD+Y KCG +  A   F Q+   +
Sbjct: 589 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 648

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            + W+++I  +   G+  +A+  F+++ +   + D     S++   +   L+ +G++   
Sbjct: 649 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 708

Query: 574 M-MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           + ++   G++  +     +VD++ + G +  A      M ++ D   W  ++     HG 
Sbjct: 709 LAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG- 764

Query: 633 MELGAVASDRLFE-----VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
             LG  +    +E     ++ + V Y  ++S    +    EG +    L    G+K
Sbjct: 765 --LGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK 818



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 196/426 (46%), Gaps = 12/426 (2%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F    ++C  L+ +++   +H   +  G    V     LV+ Y+  G ++ +   F 
Sbjct: 478 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 537

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRN---L 159
            I  R++ +WN+MI+ +V  G  S+A+D F      +   RPD +T   +LKAC +   +
Sbjct: 538 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597

Query: 160 VDGKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             GK+IH  +++ GF       +  SL+ +Y + G    ARK FD +  +   SW+++I 
Sbjct: 598 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 657

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY Q G  VEA+ +   ++     +D   ++SI+ V A    +  G  +    VK     
Sbjct: 658 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 717

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
              V N++++MY K G++  A + F +M  +DV+SW  +I  Y +      +   F  M 
Sbjct: 718 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 777

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           +  I+PD +  +++ S  +     +    +   ++        V     VVD+  + G +
Sbjct: 778 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 837

Query: 398 NSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             A  + + +P+K +V  W TL++    +G      EV +++   +  NP    YV +  
Sbjct: 838 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP--ANYVMMSN 895

Query: 457 AYSHVG 462
            Y   G
Sbjct: 896 LYGQAG 901


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/846 (32%), Positives = 443/846 (52%), Gaps = 56/846 (6%)

Query: 20  LQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQ------SCTKLHHVKRLHALLVVS 73
           L++  PL  +  +S Q + DCL      I+ DDLF         T +   + LHA ++  
Sbjct: 81  LESSFPL-DSNYHSPQTNTDCL------IEVDDLFNLLRLSVKYTDIDLARALHASILKL 133

Query: 74  GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF 133
           G+   +     ++  Y  LG +  +   F  +S  +V +++++IS + +  R +EA+  F
Sbjct: 134 GEDTHL--GNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLF 191

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           ++  + SG+ P+ Y+F  +L AC   ++   G ++H   +KLG+   VFVA +L+ +Y +
Sbjct: 192 FRMRI-SGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGK 250

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVAS 249
            G  + A  LFD+MP RD  SWN MIS   +  +  +AL++   + + +G   D  T+++
Sbjct: 251 CGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLST 310

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  CAR    + G  IH Y ++ GLE NL VSN +I  Y + G + H   +F++M  RD
Sbjct: 311 LLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRD 370

Query: 310 VVSWNSIIAAYEQ-------------------------------SNDPITAHGFFTTMQQ 338
           +++W  +I AY +                               +N+ + A   F  M Q
Sbjct: 371 IITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQ 430

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G +    TL  + +    L     SR +HGFI++ G F  +  I  A++DM +K G ++
Sbjct: 431 EGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFG-FRSNACIEAALIDMCSKCGRMD 489

Query: 399 SACAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
            A  +F+ L     + I   ++I GYA+NGL  EAI +F   +    +  ++  + SIL 
Sbjct: 490 DADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILG 549

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
               +G    G +IH + +K     ++ V   ++ MY KC  IDDA+  F  +P    V 
Sbjct: 550 VCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVS 609

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC--SHSGLVSEGQRYFHM 574
           WN +I+   +H QGD+AL  +  M   G++PD ITFV +++A   + S L+ E +  F  
Sbjct: 610 WNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLS 669

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M+    ++P  +HY  +V + G  G L  A   I  MP  P+ S+W ALL  CR+H N  
Sbjct: 670 MKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTS 729

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G   +  +  ++  +   YVL+SN+YA  G+W   + VR   RDRGL+K P  S + + 
Sbjct: 730 IGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIK 789

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
            ++  FY  +++HP+   IY  L  L  K    GY PD SFVLQ+VEE +K+  L  HS 
Sbjct: 790 KQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSA 849

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           +LA  +G++ + P  PI++ KN+ +C DCH + K+ + +T+REII RD++ FH F +G C
Sbjct: 850 KLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQC 909

Query: 815 SCGDYW 820
           SC  YW
Sbjct: 910 SCKGYW 915


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/650 (38%), Positives = 375/650 (57%), Gaps = 25/650 (3%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F    +L +Y R G  + A+ +FD MP    GSW A++S +  SG+  EA  + D M+
Sbjct: 22  DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQ 81

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
                 D I    +L V A   NI        Y      E +L     ++   A+ G M 
Sbjct: 82  ----ERDLIAWTIMLTVLATFSNIEDAK----YHFDQMPERDLVAWTAMLAANAERGQME 133

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI--QPDLLTLVSLTSI 354
           +A   FDQM ER++ SW S+++AY +S D   A   F +M +  +     +LT  SL+  
Sbjct: 134 NARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGD 193

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           V      R  R+      R      D+I   A++  YA  G +     +F+ +P +D+IS
Sbjct: 194 V-----VRAKRAFDSMPER------DLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLIS 242

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEE----CNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           W T++    +N L  E+ E+F  M         + PN+ T++++L A S +GAL +G KI
Sbjct: 243 WATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKI 302

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           HA V +     D+ V+  LV+ YG+CG + DA  +F  + R   + W+++IS     G+ 
Sbjct: 303 HAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRV 362

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           D+A+  + +ML EG  PD I F+S+L ACS+SG+V     +F  +  +  ++P L+HY C
Sbjct: 363 DEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYAC 422

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           MVD+ GRAG L  A + ++ MP  P   ++  +L AC+++ ++E G  A++ +FE+D EN
Sbjct: 423 MVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPEN 482

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              Y+ ++NIY+   + +    +R L  +RG+KK PG S IEV ++V  F  G++ HP+ 
Sbjct: 483 SSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQR 542

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           ++IY E++ L  +MK  GY  D   VLQDVEEDEKE++L  HSE+LAIAFG+IS+PP +P
Sbjct: 543 DEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAP 602

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++I KNLRVC DCH  TK IS++T REI+VRD+NRFHHF++G+CSC DYW
Sbjct: 603 LRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 247/574 (43%), Gaps = 95/574 (16%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF------ 133
           FS   +++ YA  GDLS ++  FD +   ++ +W +++S +   G   EA   F      
Sbjct: 24  FSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQER 83

Query: 134 ----YQFTLT-----SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF---------- 174
               +   LT     S +    Y F  + +  R+LV    +  +  + G           
Sbjct: 84  DLIAWTIMLTVLATFSNIEDAKYHFDQMPE--RDLVAWTAMLAANAERGQMENARETFDQ 141

Query: 175 --EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
             E ++F   SLL  Y R G    A ++FD MP  +  +W AM++GY  SG+ V A    
Sbjct: 142 MPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAF 201

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
           D M                                        E +L     +++ YA  
Sbjct: 202 DSMP---------------------------------------ERDLIAWTAMLSAYAFN 222

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-----AGIQPDLLT 347
           G +R+   +F +M ERD++SW +++AA  +++    +   F  M +      G+ P+ +T
Sbjct: 223 GHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVT 282

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
            ++L    + L      R +H  +  RG F  D+++ NA+V+ Y + G +  A  VF+G+
Sbjct: 283 FITLLDACSFLGALAEGRKIHAAVAERG-FDTDLVVSNALVNFYGRCGALGDAKIVFDGM 341

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             +DVISW+++I+ +AQ G   EA+E++  M     + P+   ++S+L A S+ G +   
Sbjct: 342 RRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTL-PDDIIFISVLFACSNSGVVEAS 400

Query: 468 IKIHARVIKNCLCFDVFV-ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
                 ++ +           C+VD+ G+ G++ DA  L   +P     + +  ++S   
Sbjct: 401 GDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACK 460

Query: 526 IHG---QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
           ++    +G+ A     ++  E   P +IT  ++ +A        +  R   +M EE GIK
Sbjct: 461 LYTDVERGEAAAEVVFELDPENSSP-YITLANIYSAAKRP---KDAARIRKLM-EERGIK 515

Query: 583 PHLKHYGC-MVDLFGRAGHLGMAHNFIQNMPVRP 615
              K  GC  +++  R       H FI    + P
Sbjct: 516 ---KKPGCSWIEVLDR------VHEFIAGDKMHP 540



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 158/388 (40%), Gaps = 60/388 (15%)

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           M+ + G +  A ++FD + +RD  SW  +++ Y +S D   A G F  M +      L +
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWS----LGS 56

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             +L S  A       ++++   +  R     D+I    ++ + A    I  A   F+ +
Sbjct: 57  WTALLSAFALSGHHEEAKTLFDTMQER-----DLIAWTIMLTVLATFSNIEDAKYHFDQM 111

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P +D+++W  ++   A+ G    A E F  M E N       ++ S+L AY   G     
Sbjct: 112 PERDLVAWTAMLAANAERGQMENARETFDQMPERNLF-----SWTSLLSAYGRSG----D 162

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
           +K   RV  +   +++   T ++  Y   G +  A   F  +P    + W A++S +  +
Sbjct: 163 VKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFN 222

Query: 528 GQGDKALNFFRQM------------------------------------LDEGVRPDHIT 551
           G        F++M                                    L +G+ P+ +T
Sbjct: 223 GHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVT 282

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F++LL ACS  G ++EG R  H    E G    L     +V+ +GR G LG A      M
Sbjct: 283 FITLLDACSFLGALAEG-RKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGM 341

Query: 612 PVRPDASIWGALLGA----CRIHGNMEL 635
             R D   W +++ A     R+   MEL
Sbjct: 342 R-RRDVISWSSMISAFAQRGRVDEAMEL 368



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 118/230 (51%), Gaps = 8/230 (3%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + + T +++ YA  G L ++R  F  +  R++ +W +M++  V    L E+ + F + 
Sbjct: 207 RDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRM 266

Query: 137 ----TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
                L+ G+ P+  TF  +L AC     L +G+KIH +V + GF+ D+ V+ +L++ Y 
Sbjct: 267 PRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYG 326

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           R G    A+ +FD M  RD  SW++MIS + Q G   EA+++   M  EG   D I   S
Sbjct: 327 RCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFIS 386

Query: 250 ILPVCARSDNI-LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           +L  C+ S  +  SG      +    +E  L     ++++  + G +R A
Sbjct: 387 VLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDA 436



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 166/417 (39%), Gaps = 77/417 (18%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + +FS T L++ Y   GD+  +   FD +   N+  W +M++ Y   G +  A       
Sbjct: 145 RNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRA------- 197

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
                 +  F + P                        E D+    ++L  Y   G    
Sbjct: 198 ------KRAFDSMP------------------------ERDLIAWTAMLSAYAFNGHLRY 227

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL-----EGVSMDPITVASIL 251
            R++F  MP RD  SW  M++   ++    E+ ++ D M       +G++ + +T  ++L
Sbjct: 228 TREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLL 287

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C+    +  G  IH  + + G + +L VSN L+N Y + G +  A  VFD M  RDV+
Sbjct: 288 DACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVI 347

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SW+S+I+A+ Q      A   +  M   G  PD +  +S+      L  C NS    G +
Sbjct: 348 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISV------LFACSNS----GVV 397

Query: 372 MRRGWFMEDVIIGNAV----------VDMYAKLGIINSACAVFEGLPVK-------DVIS 414
              G F   ++    V          VD+  + G +  A  +   +P          ++S
Sbjct: 398 EASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLS 457

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
              L T   +   A+E   VF++  E      N   Y+++   YS     +   +I 
Sbjct: 458 ACKLYTDVERGEAAAEV--VFELDPE------NSSPYITLANIYSAAKRPKDAARIR 506



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 7/143 (4%)

Query: 19  LLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGK 75
           LL+  + LF        +S     N    + F  L  +C+    L   +++HA +   G 
Sbjct: 255 LLEESKELFDRMPRHCALSKGMTPNR---VTFITLLDACSFLGALAEGRKIHAAVAERGF 311

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
              +  S  LVNFY   G L  ++  FD +  R+V +W+SMIS + + GR+ EA++ +++
Sbjct: 312 DTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHR 371

Query: 136 FTLTSGLRPDFYTFPPVLKACRN 158
             L+ G  PD   F  VL AC N
Sbjct: 372 M-LSEGTLPDDIIFISVLFACSN 393


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/697 (34%), Positives = 395/697 (56%), Gaps = 10/697 (1%)

Query: 49  DFDDLFQ---SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           +F +L Q   S   + H K +H  ++VSG     F +  L+N  +    +  +R  FD +
Sbjct: 51  EFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKM 110

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDG 162
            ++N+ TW+SM+S+Y + G   EA+  F      SG  P+ +    V++AC  L     G
Sbjct: 111 PHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKG 170

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            ++H  V++ GF+ DV+V  SL+  Y + G    AR +FD +  + + +W  +I+GY + 
Sbjct: 171 AQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKC 230

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G +  +L++  +MR   V  D   V+S+L  C+  + +  G  IH Y+++ G E ++ V 
Sbjct: 231 GRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVV 290

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N LI+ Y K   ++   ++FDQM+ ++++SW ++I+ Y Q++    A   F  M + G +
Sbjct: 291 NVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWK 350

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD     S+ +           R VH + ++      D  + N ++DMYAK  ++  A  
Sbjct: 351 PDGFACTSVLTSCGSREALEQGRQVHAYTIKAN-LESDEFVKNGLIDMYAKSNLLIDAKK 409

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF+ +  ++VIS+N +I GY+     SEA+E+F  M       PN+ T+ +++ A S++ 
Sbjct: 410 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR-VRLQKPNEFTFAALITAASNLA 468

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           +LR G + H +++K  L F  FV   LVDMY KCG I++A  +F        V WN++IS
Sbjct: 469 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 528

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            H  HG+ ++AL  FR+M+ EG++P+++TFV++L+ACSH+G V +G  +F+ M   FGIK
Sbjct: 529 THAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIK 587

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+V L GR+G L  A  FI+ MP+ P A +W +LL ACRI GN+ELG  A++ 
Sbjct: 588 PGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEM 647

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
               D ++ G Y+L+SNI+A+ G W  V +VR       + K PG S IEVNNKV++F  
Sbjct: 648 AISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIA 707

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
            + TH + + I   L  L   +K  GYVPD + +L +
Sbjct: 708 RDTTHREAD-IGSVLDILIQHIKGAGYVPDATALLMN 743


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 255/721 (35%), Positives = 400/721 (55%), Gaps = 50/721 (6%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           + Y  N  +++Y +CGRLS A   FY     S   P+ +++  ++KA        KIH  
Sbjct: 42  STYLSNHFVNLYSKCGRLSYARAAFY-----STEEPNVFSYNVIVKA---YAKDSKIH-- 91

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
                                      +AR+LFD++P  D+ S+N +ISGY  +     A
Sbjct: 92  ---------------------------IARQLFDEIPQPDTVSYNTLISGYADARETFAA 124

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           + +   MR  G  +D  T++ ++  C    +++  L  H + V  G +    V+N  +  
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQL--HCFSVSGGFDSYSSVNNAFVTY 182

Query: 289 YAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           Y+K G++R A+ VF  M E RD VSWNS+I AY Q  +   A   +  M   G + D+ T
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS---ACAVF 404
           L S+ + +  L+     R  HG +++ G F ++  +G+ ++D Y+K G  +    +  VF
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301

Query: 405 EGLPVKDVISWNTLITGYAQNG-LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           + +   D++ WNT+I+GY+ N  L+ EA++ F+ M+      P+  ++V +  A S++ +
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSS 360

Query: 464 LRQGIKIHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
             Q  +IH   IK+ +  + + V   L+ +Y K G + DA  +F ++P  ++V +N +I 
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G +AL  +++MLD G+ P+ ITFV++L+AC+H G V EGQ YF+ M+E F I+
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY CM+DL GRAG L  A  FI  MP +P +  W ALLGACR H NM L   A++ 
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L  +       YV+++N+YA+  KWE +  VR   R + ++K PG S IEV  K  +F  
Sbjct: 541 LMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVA 600

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI---LTSHSERLAIA 759
            + +HP   ++ + L  +  KMK +GYV DK + +   +E  +      L  HSE+LA+A
Sbjct: 601 EDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVA 660

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++S+     + + KNLR+CGDCHN  KF+S +  REIIVRD+ RFH FKDG CSCGDY
Sbjct: 661 FGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDY 720

Query: 820 W 820
           W
Sbjct: 721 W 721



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 245/498 (49%), Gaps = 43/498 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHAL V S    + + S   VN Y+  G LS++R  F      NV+++N ++  Y + 
Sbjct: 28  KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87

Query: 124 GRLSEAVDCFYQF---------TLTS---------------------GLRPDFYTFPPVL 153
            ++  A   F +          TL S                     G   D +T   ++
Sbjct: 88  SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI 147

Query: 154 KACRNLVDG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGS 211
            AC + VD  K++HC  +  GF+    V  + +  Y + GL   A  +F  M  +RD  S
Sbjct: 148 AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN+MI  Y Q     +AL +  EM  +G  +D  T+AS+L      D+++ G   H  ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267

Query: 272 KHGLEFNLFVSNNLINMYAKFG---MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           K G   N  V + LI+ Y+K G    M  + +VF +++  D+V WN++I+ Y   N+ ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM-NEELS 326

Query: 329 AHGF--FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
                 F  MQ+ G +PD  + V +TS  + L+     + +HG  ++       + + NA
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           ++ +Y K G +  A  VF+ +P  + +S+N +I GYAQ+G  +EA+ ++Q M +   I P
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG-IAP 445

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMS 504
           N+ T+V++L A +H G + +G + +   +K     +      +C++D+ G+ G++++A  
Sbjct: 446 NKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504

Query: 505 LFYQVP-RSSSVPWNAII 521
               +P +  SV W A++
Sbjct: 505 FIDAMPYKPGSVAWAALL 522



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 215/491 (43%), Gaps = 88/491 (17%)

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH--------------------- 297
           ++ +G  +H   VK  +  + ++SN+ +N+Y+K G + +                     
Sbjct: 23  DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82

Query: 298 ----------ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
                     A ++FD++ + D VS+N++I+ Y  + +   A   F  M++ G + D  T
Sbjct: 83  AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           L  L  I A  +     + +H F +  G F     + NA V  Y+K G++  A +VF G+
Sbjct: 143 LSGL--IAACCDRVDLIKQLHCFSVSGG-FDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199

Query: 408 -PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
             ++D +SWN++I  Y Q+   ++A+ +++ M        +  T  S+L A + +  L  
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEM-IFKGFKIDMFTLASVLNALTSLDHLIG 258

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID---DAMSLFYQVPRSSSVPWNAIISC 523
           G + H ++IK     +  V + L+D Y KCG  D   D+  +F ++     V WN +IS 
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318

Query: 524 HGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSH--------------------- 561
           + ++ +  ++A+  FRQM   G RPD  +FV + +ACS+                     
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378

Query: 562 ---------------SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
                          SG + + +  F  M E   +      + CM+  + + GH   A  
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS-----FNCMIKGYAQHGHGTEALL 433

Query: 607 FIQNM---PVRPDASIWGALLGACRIHGNMELGAVASDRL---FEVDSENVGYYVLMSNI 660
             Q M    + P+   + A+L AC   G ++ G    + +   F+++ E   +Y  M ++
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE-AEHYSCMIDL 492

Query: 661 YANVGKWEGVD 671
               GK E  +
Sbjct: 493 LGRAGKLEEAE 503


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 261/706 (36%), Positives = 396/706 (56%), Gaps = 22/706 (3%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANL 92
           +SPD       +  F  + ++C  L  VK    +H  + + G  + VF  + L+  YA  
Sbjct: 54  VSPD-------KYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAEN 106

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           G LS +++ FD+I  ++   WN M++ YV+ G    A+  F +    S ++P+  TF  V
Sbjct: 107 GHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACV 165

Query: 153 LKACRN--LVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L  C +  ++D G ++H   +  G E D  VA +LL MY +      ARKLFD +P  D 
Sbjct: 166 LSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDL 225

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SWN +ISGY Q+G   EA  +   M   G+  D IT AS LP      ++     IH Y
Sbjct: 226 VSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGY 285

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           I++H +  ++F+ + LI++Y K   +  A +   Q    D V   ++I+ Y  +     A
Sbjct: 286 IIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEA 345

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  + Q  ++P  +T  S+    A L      + +HG I++     E   +G+A++D
Sbjct: 346 LEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK-LDEKCHVGSAILD 404

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYAK G ++ AC VF  +  KD I WN++IT  +QNG   EAI +F+ M     +   + 
Sbjct: 405 MYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMG----MEGTRY 460

Query: 450 TYVSI---LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
             VSI   L A +++ AL  G +IH  +IK  L  D++  + L+DMY KCG ++ +  +F
Sbjct: 461 DCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            ++   + V WN+IIS +G HG   + L  F +ML  G++PDH+TF+ +++AC H+G V 
Sbjct: 521 DRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG RY+H+M EE+GI   ++HY C+ D+FGRAG L  A   I +MP  PDA +WG LLGA
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA 640

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C IHGN+EL  VAS  LF++D  N GYYVL++N+ A  GKW  V +VRS+ ++RG++K P
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           G+S IEVNN   +F   + +HP   +IY  L +L  ++K  GYVP 
Sbjct: 701 GYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 172/550 (31%), Positives = 297/550 (54%), Gaps = 8/550 (1%)

Query: 88  FYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY 147
            Y   G L  +++ F  +       WN MI  +   G+ + A+  FY   L +G+ PD Y
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYAL-LFYLKMLGAGVSPDKY 59

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           TFP V+KAC   +++  GK +H +V  +G + DVFV +SL+ +Y   G  + A+ LFD++
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
           P +DS  WN M++GY ++G++  A+ I  EMR   +  + +T A +L VCA    +  G 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H   V  GLE +  V+N L+ MY+K   ++ A ++FD + + D+VSWN II+ Y Q+ 
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F  M  AGI+PD +T  S    V +L   ++ + +HG+I+R    + DV + 
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL-DVFLK 298

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           +A++D+Y K   +  A          D +   T+I+GY  NG   EA+E F+ + +   +
Sbjct: 299 SALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERM 357

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P   T+ SI PA++ + AL  G ++H  +IK  L     V + ++DMY KCGR+D A  
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++    ++ WN++I+    +G+  +A+N FRQM  EG R D ++    L+AC++   
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           +  G+   H +  +  ++  L     ++D++ + G+L  +      M  + + S W +++
Sbjct: 478 LHYGKE-IHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVS-WNSII 535

Query: 625 GACRIHGNME 634
            A   HG+++
Sbjct: 536 SAYGNHGDLK 545


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/659 (38%), Positives = 385/659 (58%), Gaps = 17/659 (2%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSS---TKLVNFYANLGDLSFSRHTFD 103
           +  L Q CT    + + K++HA  +  G + + +S    + L   YA  G    +R  FD
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKACRNLV-- 160
            +   ++++WN+MI +Y   G   +A+  F Q  L SG R PD YT+P V+KAC + +  
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQM-LASGRRWPDNYTYPFVIKACGDYLLP 139

Query: 161 -DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
             G  IH   +  GF+ D FV  SL+ MY   G   VAR++FD M  R   SWN MI+GY
Sbjct: 140 EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGY 199

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            ++G   EAL + D M  +G+  D  TV S+LPVC+    +  G  +H  +    L  ++
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            V N+L++MYAK G M  A  +F +M +RDVVSW +++  Y  + D  +A      MQ  
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
            ++P+ +TL S+ S  A L   ++ R +HG+ +R+     +VI+  A++DMYAK   +N 
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQK-LESEVIVETALIDMYAKCNNVNL 378

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAY 458
           +  VF     +    WN +I+G   NGL+ +AIE+F QM+ E   ++PN  T  S+LPAY
Sbjct: 379 SFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEA--VDPNDATLNSLLPAY 436

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS--VP 516
           + +  L+Q   +H  +I++     + VAT L+D+Y KCG ++ A ++F  +P+     + 
Sbjct: 437 AFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIIT 496

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W+AII+ +G+HG G+ A++ F QM+  GV+P+ ITF S+L ACSH+GLV EG   F  M 
Sbjct: 497 WSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFML 556

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
           E+  +     HY C++DL GRAG L  A+  I+ M  RP+ ++WGALLG+C IH N+ELG
Sbjct: 557 EDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELG 616

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
            VA+  LFE++  N G YVL++NIY+ VG+W   + VR +  + GL+KTP  S IEV N
Sbjct: 617 EVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/648 (36%), Positives = 364/648 (56%), Gaps = 38/648 (5%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M +  S S     S  C  G   +A D         +  DP   + +L  C +  ++  G
Sbjct: 27  MKISSSASLQEFTS-LCNDGRIKQAYDTFTS----EIWSDPSLFSHLLQSCIKLGSLFGG 81

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL------------------------ 299
             +H  I+  G   + F+SN+L+N Y+K G  + +L                        
Sbjct: 82  KQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQL 141

Query: 300 -------RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
                  ++FD+M ER++ +WN++IA   Q      A   F  M   G  PD  TL S+ 
Sbjct: 142 GDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVL 201

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A L      + VH  +++ G+ +  V+ G+++  MY K G ++    + + +P++ V
Sbjct: 202 RGCAGLRSLLAGQEVHACLLKCGFELSSVV-GSSLAHMYIKSGSLSDGEKLIKSMPIRTV 260

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++WNTLI G AQNG   E +  + MM+      P++ T+VS+L A S +  L QG +IHA
Sbjct: 261 VAWNTLIAGKAQNGCPEEVLNQYNMMKMAG-FRPDKITFVSVLSACSELATLGQGQQIHA 319

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            VIK      + V + L+ MY + G ++D++  F        V W+++I+ +G HG+G++
Sbjct: 320 EVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEE 379

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL  F QM D  +  + +TF+SLL ACSHSGL  +G  YF +M +++ +KP ++HY C+V
Sbjct: 380 ALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVV 439

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DL GRAG L  A   I++MPV+PD  IW  LL AC++H   E+    S+ + ++D  +  
Sbjct: 440 DLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAA 499

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
            YVL+SNI+A+   W  V ++R   RDR ++K PG S +E+ N V  F  G+++HP+Y +
Sbjct: 500 SYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFE 559

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 772
           I   L+ L +++K  GYVP+   VL D++ +EKE+ L  HSE+ AIAF ++++    PI+
Sbjct: 560 IDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIR 619

Query: 773 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + KNLRVC DCHN  K IS+I  REIIVRD++RFHHFKDG CSCG+YW
Sbjct: 620 VMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 208/442 (47%), Gaps = 43/442 (9%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYA---------------- 90
           F  L QSC KL  +   K++H+L++ SG  K  F S  L+NFY+                
Sbjct: 65  FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124

Query: 91  ---------------NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
                           LGDL  ++  FD +S RN+ TWN+MI+   +     +A+  F +
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184

Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                G  PD +T   VL+ C   R+L+ G+++H  +LK GFE    V +SL HMY + G
Sbjct: 185 M-YGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSG 243

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             +   KL   MP+R   +WN +I+G  Q+G   E L+  + M++ G   D IT  S+L 
Sbjct: 244 SLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+    +  G  IH  ++K G    L V ++LI+MY++ G +  +++ F      DVV 
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           W+S+IAAY        A   F  M+   ++ + +T +SL    +              ++
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEA 431
           ++      +     VVD+  + G +  A  +   +PV+ D I W TL+   A   L  EA
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL---AACKLHKEA 480

Query: 432 IEVFQMMEECNEINP-NQGTYV 452
               ++ EE  +++P +  +YV
Sbjct: 481 EMAERISEEIIKLDPLDAASYV 502



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 218/446 (48%), Gaps = 43/446 (9%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
           GR+ +A D F     TS +  D   F  +L++C    +L  GK++H  ++  G   D F+
Sbjct: 45  GRIKQAYDTF-----TSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFI 99

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           +  LL+ Y + G    +  LF +MP R+  S+N +I+GY Q G+   A  + DEM    +
Sbjct: 100 SNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNI 159

Query: 241 SM-------------------------------DPITVASILPVCARSDNILSGLLIHLY 269
           +                                D  T+ S+L  CA   ++L+G  +H  
Sbjct: 160 ATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHAC 219

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           ++K G E +  V ++L +MY K G +    ++   M  R VV+WN++IA   Q+  P   
Sbjct: 220 LLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEV 279

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              +  M+ AG +PD +T VS+ S  ++L      + +H  +++ G      ++ ++++ 
Sbjct: 280 LNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVV-SSLIS 338

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MY++ G +  +   F      DV+ W+++I  Y  +G   EA+E+F  ME+  ++  N+ 
Sbjct: 339 MYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDL-KMEANEV 397

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
           T++S+L A SH G   +G +    ++K   L   +   TC+VD+ G+ GR+++A  +   
Sbjct: 398 TFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRS 457

Query: 509 VP-RSSSVPWNAIISCHGIHGQGDKA 533
           +P +   + W  +++   +H + + A
Sbjct: 458 MPVQPDGIIWKTLLAACKLHKEAEMA 483



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 29/219 (13%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I F  +  +C++L  +   +++HA ++ +G    +   + L++ Y+  G L  S   F 
Sbjct: 295 KITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFV 354

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
                +V  W+SMI+ Y   GR  EA++ F+Q      +  +  TF  +L AC       
Sbjct: 355 DRENFDVVLWSSMIAAYGFHGRGEEALELFHQME-DLKMEANEVTFLSLLYACS------ 407

Query: 164 KIHCSVLKLGFEW-DVFVAASLL-----HMYC------RFGLANVARKLFDDMPVRDSG- 210
             H  + + G E+ D+ V    L     H  C      R G    A  +   MPV+  G 
Sbjct: 408 --HSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGI 465

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
            W  +++  C+     E  + + E   E + +DP+  AS
Sbjct: 466 IWKTLLAA-CKLHKEAEMAERISE---EIIKLDPLDAAS 500


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/697 (34%), Positives = 389/697 (55%), Gaps = 35/697 (5%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 209
           +L+ C  + +  +IH   +K G   +      ++   C     +V  ARK+FD++P    
Sbjct: 41  LLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSV 100

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             WN MI GY +   +   + +   M +  +  D  T   +L    +   +  G ++  +
Sbjct: 101 FIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNH 160

Query: 270 IVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            V HG L+ NLFV    I++++  G++ +A ++FD     +VV+WN +++ Y +      
Sbjct: 161 AVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEE 220

Query: 329 AHGFFTTMQQAG--IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
           +   F  M++    + P+ +TLV + S  ++L D    + ++   ++ G    ++I+ NA
Sbjct: 221 SKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENA 280

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE------ 440
           ++DM+A  G +++A  VF+ +  +DVISW +++TG+A       A + F  M E      
Sbjct: 281 LIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSW 340

Query: 441 ------------------------CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
                                    + + P++ T VSIL A +H+GAL  G      + K
Sbjct: 341 TAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDK 400

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
           N +  D F+   L+DMY KCG ++ A  +F ++ +     W A+I     +G G++AL  
Sbjct: 401 NKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTM 460

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           F  ML+  V PD IT++ ++ AC+H GLV++G+ +F  M  + GIKP+L HYGCMVDL G
Sbjct: 461 FSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLG 520

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAGHL  A   I NMPV+P++ +WG+LLGACR+H N++L  +A++ + E++ EN   YVL
Sbjct: 521 RAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVL 580

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           + NIYA   KW+ +  VR +  +RG+KK PG S +E+N  V  F  G+++HP+ ++IY +
Sbjct: 581 LCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAK 640

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           L N+   + + GY PD S V  DV E++KE  L  HSE+LAIA+ +ISS     I+I KN
Sbjct: 641 LENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKN 700

Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           LR+C DCH+    +S++  RE+IVRD  RFHHF+ G+
Sbjct: 701 LRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHGL 737



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 254/517 (49%), Gaps = 45/517 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF--YANLGDLSFSRHTFDHISYRNV 110
           L ++C  ++ + ++H+  + +G        TK++ F      GD+ ++R  FD I   +V
Sbjct: 41  LLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSV 100

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHC 167
           + WN+MI  Y R    SE+    Y+  L   ++PD +TFP +LK       L  GK +  
Sbjct: 101 FIWNTMIKGYSRIN-CSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLN 159

Query: 168 SVLKLGF-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             +  GF + ++FV    +H++   GL N ARK+FD     +  +WN ++SGY +     
Sbjct: 160 HAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYE 219

Query: 227 EALDILDEM--RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL-EFNLFVSN 283
           E+  +  EM  + E VS + +T+  +L  C++  +++ G  I+   +K G+ E NL + N
Sbjct: 220 ESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILEN 279

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT-------- 335
            LI+M+A  G M  A  VFD+M  RDV+SW SI+  +  +     A  +F          
Sbjct: 280 ALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVS 339

Query: 336 -----------------------MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
                                  MQ + ++PD  T+VS+ +  A L           +I 
Sbjct: 340 WTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYI- 398

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
            +     D  IGNA++DMY K G +  A  +F  +  KD  +W  +I G A NG   EA+
Sbjct: 399 DKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEAL 458

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVD 491
            +F  M E + + P++ TY+ ++ A +HVG + +G    + + +++ +  ++    C+VD
Sbjct: 459 TMFSYMLEAS-VTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVD 517

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           + G+ G + +A+ +   +P + +S+ W +++    +H
Sbjct: 518 LLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVH 554


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/789 (33%), Positives = 433/789 (54%), Gaps = 41/789 (5%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHISYRN 109
           L +SC  L HV  +HA L  +    ++F    L+  Y  LG    L  +R   D +  RN
Sbjct: 8   LLRSCAALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAAR-LLDEMPRRN 66

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
             ++N +I  Y R G  + ++  F +    + +  D +T+   L AC   +D   GK +H
Sbjct: 67  AVSYNLVIVAYSRAGLPALSLATFARARAWARV-VDRFTYAAALAACSRALDVRTGKAVH 125

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V+  G    +F++ S+  MY R G    AR++FD    RD  SWNA++SGY ++G   
Sbjct: 126 AMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGARE 185

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARS------DNILSGLL---IHLYIVKHGLEF 277
           E L++   M   G+  +   + SI+  CA S       ++  G +   +H  +VK GL+ 
Sbjct: 186 ETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDA 245

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFT 334
           +LF+++ +I+MYAK G + +A+ +F  + + +V+  N++IA +   E ++    A G ++
Sbjct: 246 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYS 305

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            +Q  G+QP   +  S+        +    + +HG +++   F  DV IG+A++D+Y+  
Sbjct: 306 ELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHS-FQGDVYIGSALIDLYSGS 364

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G +      F  LP +DV+ W ++I+G  QN L  EA+ +FQ    C  + P+     S+
Sbjct: 365 GCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCG-LRPDVFAMSSV 423

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRS 512
           + A + +   R G +I    +K+   F+ F A     + M  + G +D A   F ++   
Sbjct: 424 MNACASLAVARTGEQIQCLAVKSG--FNRFTAMGNSFIHMCARSGDVDAATRRFQEMESR 481

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSGLVSEGQRY 571
             V W+A+IS H  HG    AL  F +MLD  V P + ITF+S+LTACSH GLV EG RY
Sbjct: 482 DVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEGLRY 541

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           + +M +E+G+ P +KH  C+VDL GRAG L  A  FI++     DA +W +LL +CRIHG
Sbjct: 542 YGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHG 601

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           +ME G + +D++ +++  +   YV++ N+Y + G+     + R L ++RG+KK PG S I
Sbjct: 602 DMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWI 661

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           E+++ V  F  G+++HP+ + IY ++  + +K+  +                 ++ +   
Sbjct: 662 ELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGI--------------SSREQDLAGC 707

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE+LA+AFG+I  P  +PI++ KNLRVC DCH+  + IS+   REII+RD+ RFH F+D
Sbjct: 708 HSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAIRFHRFRD 767

Query: 812 GICSCGDYW 820
           G CSCG YW
Sbjct: 768 GSCSCGGYW 776


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/688 (35%), Positives = 389/688 (56%), Gaps = 11/688 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L ++C     + +LH+  + +G +   F  TKL   YA    +  +   F    +R VY 
Sbjct: 145 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYL 204

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGL----RPDFYTFPPVLKAC---RNLVDGKKI 165
           WN+++  Y   G   E +  F Q    S +    RPD Y+    LK+C   R L+ GK I
Sbjct: 205 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 264

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  + K+  + D+FV ++L+ +Y + G  N A K+F + P  D   W ++ISGY QSG+ 
Sbjct: 265 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 324

Query: 226 VEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             AL     M + E VS DP+T+ S+   CA+  N   G  +H ++ + GL+  L ++N+
Sbjct: 325 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANS 384

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+++Y K G +++A  +F +M ++D++SW++++A Y  +         F  M    I+P+
Sbjct: 385 LLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPN 444

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T+VS+    A +++      +H   +  G+ ME   +  A++DMY K      A  +F
Sbjct: 445 WVTVVSVLRACACISNLEEGMKIHELAVNYGFEME-TTVSTALMDMYMKCFSPEKAVDLF 503

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P KDVI+W  L +GYA NG+  E++ VF+ M       P+    V IL   S +G L
Sbjct: 504 NRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG-TRPDAIALVKILTTISELGIL 562

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           +Q + +HA VIKN    + F+   L+++Y KC  I+DA  +F  +     V W++II+ +
Sbjct: 563 QQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAY 622

Query: 525 GIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           G HGQG++AL  F QM +    +P+++TF+S+L+ACSHSGL+ EG   F +M  ++ +KP
Sbjct: 623 GFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKP 682

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
           + +HY  MVDL GR G L MA + I NMP++    IWGALLGACRIH N+++G VA+  L
Sbjct: 683 NSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNL 742

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
           F +D  + GYY+L+SNIY+    W    ++R L +++ L K  G S +E+ N+V  F  G
Sbjct: 743 FSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAG 802

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           +R H + + IY+ L  L AKM+ + + P
Sbjct: 803 DRIHDESDHIYEILTKLHAKMREVAFDP 830


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/670 (37%), Positives = 378/670 (56%), Gaps = 6/670 (0%)

Query: 155 ACRNLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
           A R+   G+  H   L+L       F+ A L+++Y +  L   A       P     S+ 
Sbjct: 27  ASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYT 86

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVK 272
           A ISG  Q G  + AL     M   G+  +  T  S     A +    + G  IH   ++
Sbjct: 87  AFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIR 146

Query: 273 HG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
            G L  + FVS   ++MY K G ++ A  +F +M  R+VV+WN+++        P+    
Sbjct: 147 FGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIE 206

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            +  +++AG  P++++  +  +  A           HGF+++ G+ M DV + N++VD Y
Sbjct: 207 AYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM-DVSVLNSMVDFY 265

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K      A AVF+G+ V++ +SW +++  YAQNG   EA   +       E  P     
Sbjct: 266 GKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE-EPTDFMV 324

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S L   + +  L  G  +HA  +++C+  ++FVA+ LVDMYGKCG ++DA  +FY+ P+
Sbjct: 325 SSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQ 384

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQR 570
            + V WNA+I  +   G    AL  F  M+  G   P++IT V+++T+CS  GL  +G  
Sbjct: 385 RNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYE 444

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
            F  M+E FGI+P  +HY C+VDL GRAG    A+  IQ MP+RP  S+WGALLGAC++H
Sbjct: 445 LFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMH 504

Query: 631 GNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSS 690
           G  ELG +A+++LFE+D ++ G +VL+SN++A+ G+W    ++R   ++ G+KK PG S 
Sbjct: 505 GKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSW 564

Query: 691 IEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILT 750
           +   N V +F   +  H  Y +I   L  L  +M++ GY+PD  + L D+EE+EKE  + 
Sbjct: 565 VTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVF 624

Query: 751 SHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFK 810
            HSE+LA+AFG+I  PP  PI+I KNLR+C DCH   KFIS I  REIIVRD+NRFHHFK
Sbjct: 625 QHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFK 684

Query: 811 DGICSCGDYW 820
              CSCGDYW
Sbjct: 685 QYQCSCGDYW 694



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 230/483 (47%), Gaps = 16/483 (3%)

Query: 59  KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           +L       AL +++  + + F    LVN Y+ L   + +        +  V ++ + IS
Sbjct: 32  RLGRAAHARALRLIAPAL-SPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFIS 90

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD----GKKIHCSVLKLGF 174
              + GR   A+  F    L  GLRP+ +TFP   KA  +       G +IH   ++ G+
Sbjct: 91  GAAQHGRPLPALSAFAGM-LRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGY 149

Query: 175 -EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
              D FV+ + L MY + G   +AR LF +MP R+  +WNA+++     G  +E ++   
Sbjct: 150 LPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYF 209

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            +R  G   + ++  +    CA +  +  G   H ++VK G E ++ V N++++ Y K  
Sbjct: 210 GLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCR 269

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
               A  VFD M  R+ VSW S++AAY Q+     A   +   +++G +P    + S  +
Sbjct: 270 CAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALT 329

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L      R++H  +  R     ++ + +A+VDMY K G +  A  +F   P ++++
Sbjct: 330 TCAGLLGLHLGRALHA-VAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLV 388

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           +WN +I GYA  G A  A+ VF  M    E  PN  T V+++ + S  G  + G ++   
Sbjct: 389 TWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFET 448

Query: 474 VIKNCLCFDVFVAT----CLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHG 528
           + +    F +   T    C+VD+ G+ G  + A  +   +P   S+  W A++    +HG
Sbjct: 449 MRER---FGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 505

Query: 529 QGD 531
           + +
Sbjct: 506 KTE 508



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 41/225 (18%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           LH  + LHA+ V S     +F ++ LV+ Y   G +  +   F     RN+ TWN+MI  
Sbjct: 337 LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGG 396

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL-KLGFE 175
           Y   G    A+  F     +    P++ T   V+ +C       DG ++  ++  + G E
Sbjct: 397 YAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIE 456

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ------------- 221
                 A ++ +  R G+   A ++   MP+R S S W A++ G C+             
Sbjct: 457 PRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALL-GACKMHGKTELGRIAAE 515

Query: 222 ---------SGNAV-------------EALDILDEMRLEGVSMDP 244
                    SGN V             EA DI  EM+  G+  DP
Sbjct: 516 KLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDP 560


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/676 (38%), Positives = 374/676 (55%), Gaps = 50/676 (7%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV---ARKLFDDMPVRD 208
           +L  C +L   K+IH  + K G   D  V   LL ++C   +++    A +LF   P  D
Sbjct: 8   LLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLL-LHCAITISDALHYALRLFHHFPNPD 66

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIH 267
           +   N +I     S   + +L    ++R +  +S D  T A  L   A S ++  G+ +H
Sbjct: 67  TFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLH 126

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
               +HG + ++FV   LI+MYA+ G    A RVFD+M E +VV+WN+++ A  +  D  
Sbjct: 127 SQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVE 186

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  M           + +LTS                      W        N +
Sbjct: 187 GAQDVFGCM----------PVRNLTS----------------------W--------NGM 206

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINP 446
           +  YAK G +  A  VF  +P++D +SW+T+I G+A NG   EA   F +++ E  EI  
Sbjct: 207 LAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLRE--EIRT 264

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+ +   +L A +  GA   G  +H  V K    +   V   L+D Y KCG +  A  +F
Sbjct: 265 NEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVF 324

Query: 507 YQVPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
             +P + S V W +II+   +HG G++A+  F +M + GVRPD ITF+SLL ACSHSGLV
Sbjct: 325 QNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLV 384

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            EG   F  M+  +GI+P ++HYGCMVDL+GRA  L  A+ FI  MPV P+A IW  LLG
Sbjct: 385 EEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLG 444

Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
           AC IHGN+E+  +   RL E+D +N G +VL+SN+YA  GKW+ V  +R    +  +KKT
Sbjct: 445 ACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKT 504

Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSFVLQDVEEDE 744
           PGWS IE++  +  F  G + +   E+ +++LR +  ++++  GY P    VL D+EE+E
Sbjct: 505 PGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEE 564

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KE  ++ HSE+LA AFGI   P    ++I KNLRVCGDCH   K IS++ + EIIVRD +
Sbjct: 565 KEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRS 624

Query: 805 RFHHFKDGICSCGDYW 820
           RFH FKDG CSC DYW
Sbjct: 625 RFHSFKDGFCSCRDYW 640



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 187/408 (45%), Gaps = 57/408 (13%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH+     G    +F  T L++ YA  GD   +R  FD +S  NV TWN++++   RCG
Sbjct: 124 QLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCG 183

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
            +  A D F       G  P            RNL                W+  +A   
Sbjct: 184 DVEGAQDVF-------GCMP-----------VRNLTS--------------WNGMLAG-- 209

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
              Y + G   +AR++F +MP+RD  SW+ MI G+  +G   EA     E+  E +  + 
Sbjct: 210 ---YAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNE 266

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +++  +L  CA++     G ++H ++ K G  +   V+N LI+ Y+K G +  A  VF  
Sbjct: 267 VSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQN 326

Query: 305 M-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           M + R +VSW SIIA          A   F  M+++G++PD +T +SL      L  C +
Sbjct: 327 MPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISL------LYACSH 380

Query: 364 SRSVH---GFI--MRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISWN 416
           S  V    G    M+  + +E  I     +VD+Y +   +  A      +PV  + I W 
Sbjct: 381 SGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWR 440

Query: 417 TLITGYAQNGLASEAIEVFQMME-ECNEINP-NQGTYVSILPAYSHVG 462
           TL+   + +G     IE+ ++++    E++P N G +V +   Y+  G
Sbjct: 441 TLLGACSIHG----NIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAG 484



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/341 (19%), Positives = 138/341 (40%), Gaps = 62/341 (18%)

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG-IINSACAVFEGLPVKD 411
           S++++ +  + ++ +H  I + G   + ++ G  ++     +   ++ A  +F   P  D
Sbjct: 7   SLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPD 66

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
               NTLI   + +     ++  F  +     ++P+  T+   L A ++   LR GI++H
Sbjct: 67  TFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLH 126

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS----CHGIH 527
           ++  ++     +FV T L+ MY +CG    A  +F ++   + V WNA+++    C  + 
Sbjct: 127 SQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVE 186

Query: 528 GQGD---------------------KA--LNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           G  D                     KA  L   R++  E    D +++ +++   +H+G 
Sbjct: 187 GAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGC 246

Query: 565 VSEGQRYF-HMMQEEF--------GIKPHLKHYG-------------------------C 590
             E   +F  +++EE         G+       G                          
Sbjct: 247 FDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNA 306

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           ++D + + G++ MA    QNMPV      W +++    +HG
Sbjct: 307 LIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHG 347


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/625 (37%), Positives = 365/625 (58%), Gaps = 11/625 (1%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A+ +F  +       +N++I     S   +EAL +   M   G+  D +T   ++  C  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S     GLL+H ++VK G E + ++ ++LI++YA    +  A ++F+    RDVVSWN++
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y +  +   A   F  M    +  D+++  ++ +  A +     ++ +   +  R  
Sbjct: 268 IDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRLFDEMPER-- 321

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              +++  N+++  + K G +  A  +F  +P +DV+SWN+++  YAQ G  +EA+ +F 
Sbjct: 322 ---NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFD 378

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M     + P + T VS+L A +H+GAL +G+ +H  +  N +  +  V T LVDMY KC
Sbjct: 379 QMRAVG-VKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKC 437

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G+I  A  +F  +     + WN II+   IHG   +A   F++M + GV P+ ITFV++L
Sbjct: 438 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAIL 497

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +ACSH+G+V EGQ+    M   +GI+P ++HYGC++DL  RAG L  A   I  MP+ P+
Sbjct: 498 SACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPN 557

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
            S  GALLG CRIHGN ELG +   RL  +   + G Y+L+SNIYA   KW+   +VR+L
Sbjct: 558 PSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNL 617

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSF 735
            +  G+ K PG S IE+   V  F  G+ +HP+  KIY++L  +  ++KS +GY  D   
Sbjct: 618 MKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGN 677

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           VL D+EE++KEH L  HSE+LAIA+G++    K  I+I KNLRVC DCH+  K IS++  
Sbjct: 678 VLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYG 737

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           REIIVRD NRFHHF+DG CSC D+W
Sbjct: 738 REIIVRDRNRFHHFEDGECSCLDFW 762



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 239/489 (48%), Gaps = 26/489 (5%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           +S+  +P+ L N         LF  C  L H+K++HA ++         S+   ++  + 
Sbjct: 81  SSMSRTPNPLTNPPSNPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSP 140

Query: 92  LGD-LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFP 150
               L++++  F H+       +NS+I          EA+   Y   L SGL+PD  T+P
Sbjct: 141 FPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALP-LYHTMLQSGLKPDHMTYP 199

Query: 151 PVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
            V+KAC        G  +H  V+K GFE D ++ +SL+H+Y        A++LF+    R
Sbjct: 200 FVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR 259

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           D  SWNAMI GY +      A  + D M    V  D I+  +++   A    I+  +   
Sbjct: 260 DVVSWNAMIDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYA----IVGKIDEA 311

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
             +     E NL   N+++  + K G +  A  +F +M  RDVVSWNS++A Y Q   P 
Sbjct: 312 KRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 371

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  M+  G++P   T+VSL S  A L        +H +I        + I+G A+
Sbjct: 372 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYI-NDNRIEVNSIVGTAL 430

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           VDMYAK G I+ A  VF  +  KDV++WNT+I G A +G   EA ++F+ M+E   + PN
Sbjct: 431 VDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAG-VEPN 489

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDD 501
             T+V+IL A SH G + +G K     + +C+     +        C++D+  + G +++
Sbjct: 490 DITFVAILSACSHAGMVDEGQK-----LLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEE 544

Query: 502 AMSLFYQVP 510
           AM L   +P
Sbjct: 545 AMELIGTMP 553



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 164/349 (46%), Gaps = 14/349 (4%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V SG     +  + L++ YAN  DL  ++  F+  S R+V +WN+MI  YV+   
Sbjct: 217 VHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVE 276

Query: 126 LSEAVDCFYQF----TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVA 181
           +  A   F +      ++     + Y     +   + L D             E ++   
Sbjct: 277 MGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMP----------ERNLVSW 326

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            S+L  + + G    A  LF +MP RD  SWN+M++ Y Q G   EAL + D+MR  GV 
Sbjct: 327 NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVK 386

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
               TV S+L  CA    +  GL +H YI  + +E N  V   L++MYAK G +  A +V
Sbjct: 387 PTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQV 446

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F+ M  +DV++WN+IIA      +   A   F  M++AG++P+ +T V++ S  +     
Sbjct: 447 FNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 506

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
              + +   +         V     V+D+ A+ G +  A  +   +P++
Sbjct: 507 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPME 555


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/708 (35%), Positives = 381/708 (53%), Gaps = 72/708 (10%)

Query: 181 AASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           A SL+      G    A   FD +P   RD+   NAM+S + ++  A  A+ +   +   
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 239 G-VSMDPITVASILPVCARSDNILSG--LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           G +  D  +  +++    +  N+ +     +H  ++K G    L VSN LI +Y K    
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 296 R---HALRVFDQMMERDVVSW-------------------------------NSIIAAYE 321
                A +V D+M ++D ++W                               N++I+ Y 
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-RGWFMED 380
           QS     A   F  M    +  D  T  S+ S  A      + +SVHG I+R +  F+ +
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 381 VI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
               + NA+V +Y+K G I  A  +F+ + +KDV+SWNT+++GY  +G   +A+EVF++M
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 439 EECN------------------------------EINPNQGTYVSILPAYSHVGALRQGI 468
              N                              ++ P   TY   + A   +GAL+ G 
Sbjct: 395 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 454

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           ++HA +++            L+ MY KCG ++DA  +F  +P   SV WNA+IS  G HG
Sbjct: 455 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 514

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +AL  F QM+ EG+ PD I+F+++LTAC+H+GLV EG  YF  M+ +FGI P   HY
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
             ++DL GR+G +G A + I+ MP  P  SIW A+L  CR +G+ME GA A+D+LF +  
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           ++ G Y+L+SN Y+  G+W     VR L RDRG+KK PG S IEV +K+ +F  G+  HP
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694

Query: 709 KYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK 768
           + +++Y  L  + A+M+ LGYVPD  FVL D+E  EKE+IL +HSE+LA+ FG++  PP 
Sbjct: 695 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 754

Query: 769 SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           + + + KNLR+CGDCH    F+S+   REI+VRD  RFHHFKDG CSC
Sbjct: 755 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 169/594 (28%), Positives = 268/594 (45%), Gaps = 99/594 (16%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           +T LV   A  G L  +   FD +  + R+    N+M+S + R    + AV  F+    +
Sbjct: 95  ATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 154

Query: 140 SGLRPDFYTFPPVLKAC---RNLVDG--KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
             LRPD Y+F  ++ A     NL      ++HCSVLK G    + V+ +L+ +Y +    
Sbjct: 155 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 214

Query: 195 NV---ARKLFDDMPVRDSGS-------------------------------WNAMISGYC 220
                ARK+ D+MP +D  +                               WNAMISGY 
Sbjct: 215 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 274

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF--- 277
           QSG   +A ++   M  E V +D  T  S+L  CA +   + G  +H  I++    F   
Sbjct: 275 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 334

Query: 278 -NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS------------- 323
             L V+N L+ +Y+K G +  A R+FD M  +DVVSWN+I++ Y  S             
Sbjct: 335 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 324 ---ND-------PITAHG--------FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
              ND           HG         F  M+   ++P   T     +   +L   ++ R
Sbjct: 395 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 454

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H  +++ G F      GNA++ MYAK G +N A  VF  +P  D +SWN +I+   Q+
Sbjct: 455 QLHAHLVQCG-FEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQH 513

Query: 426 GLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
           G   EA+E+F QM+ E   I+P++ ++++IL A +H G + +G      + ++   F + 
Sbjct: 514 GHGREALELFDQMVAE--GIDPDRISFLTILTACNHAGLVDEGFHYFESMKRD---FGIS 568

Query: 485 VA----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
                   L+D+ G+ GRI +A  L   +P   +   W AI+S  G    GD  + F   
Sbjct: 569 PGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILS--GCRTNGD--MEFGAY 624

Query: 540 MLDEGVR--PDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
             D+  R  P H  T++ L    S +G   +  R   +M++  G+K   K  GC
Sbjct: 625 AADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR-GVK---KEPGC 674



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 12/258 (4%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K V S   +++ Y + G L  +   F  + Y+N  +W  M+S YV  G   +A+  F Q
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424

Query: 136 FTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                 ++P  YT+   + AC  L     G+++H  +++ GFE       +LL MY + G
Sbjct: 425 MR-AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             N AR +F  MP  DS SWNAMIS   Q G+  EAL++ D+M  EG+  D I+  +IL 
Sbjct: 484 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 543

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKFGMMRHALRVFDQM-ME 307
            C  +  +  G     Y      +F +    +    LI++  + G +  A  +   M  E
Sbjct: 544 ACNHAGLVDEGF---HYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 600

Query: 308 RDVVSWNSIIAAYEQSND 325
                W +I++    + D
Sbjct: 601 PTPSIWEAILSGCRTNGD 618



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 23/181 (12%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L H ++LHA LV  G   +  +   L+  YA  G ++ +R  F  +   +  +WN+MIS 
Sbjct: 450 LKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISA 509

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW--- 176
             + G   EA++ F Q  +  G+ PD  +F  +L AC         H  ++  GF +   
Sbjct: 510 LGQHGHGREALELFDQM-VAEGIDPDRISFLTILTACN--------HAGLVDEGFHYFES 560

Query: 177 ---DVFVA------ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAV 226
              D  ++      A L+ +  R G    AR L   MP   + S W A++SG C++   +
Sbjct: 561 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG-CRTNGDM 619

Query: 227 E 227
           E
Sbjct: 620 E 620


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/571 (39%), Positives = 349/571 (61%), Gaps = 2/571 (0%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           IL +CAR+  ++     H   ++  L+ ++ +SN LIN Y+K G +  A +VFD M+ER 
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           +VSWN++I  Y ++     A   F  M+  G +    T+ S+ S      D    + +H 
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
             M+    + ++ +G A++D+YAK G+IN A  VFE +  K  ++W++++ GY Q+    
Sbjct: 189 LSMKTSLDL-NLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYE 247

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           EA+ +++  +  + +  NQ T  S++ A S++ AL +G ++HA + K+    +VFVA+  
Sbjct: 248 EALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSA 306

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           VDMY KCG + ++  +F +V   +   WN IIS    H +  + +  F +M  +G+ P+ 
Sbjct: 307 VDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 366

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           +TF SLL+ C H+GLV EG+R+F +M+  +G+ P++ HY CMVD+ GRAG L  A+  I+
Sbjct: 367 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 426

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEG 669
           ++P  P ASIWG+LL +CR+  N+EL  VA+ +LFE++ EN G +VL+SNIYA   +WE 
Sbjct: 427 SIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEE 486

Query: 670 VDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGY 729
           + + R L RD  +KK  G S I++ +KV IF  G  +HP+  +I   L NL  +++  GY
Sbjct: 487 IAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGY 546

Query: 730 VPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
            P     L DVE  +KE +L  HSE+LA+ FG++  P  S ++I KNLR+C DCH + K 
Sbjct: 547 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKA 606

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            S  T R IIVRD+NRFHHF DG CSCG++W
Sbjct: 607 ASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 209/380 (55%), Gaps = 9/380 (2%)

Query: 149 FPPVLKAC-RN--LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           F  +L+ C RN  +++ K  H   +++  + DV ++  L++ Y + G   +AR++FD M 
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R   SWN MI  Y ++    EALDI  EMR EG      T++S+L  C  + + L    
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H   +K  L+ NL+V   L+++YAK GM+  A++VF+ M ++  V+W+S++A Y QS +
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   +   Q+  ++ +  TL S+    + L      + +H  I + G F  +V + +
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSG-FGSNVFVAS 304

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           + VDMYAK G +  +  +F  +  K++  WNT+I+G+A++    E + +F+ M++ + ++
Sbjct: 305 SAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQ-DGMH 363

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVATCLVDMYGKCGRIDDAM 503
           PN+ T+ S+L    H G + +G +   ++++    L  +V   +C+VD+ G+ G + +A 
Sbjct: 364 PNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAY 422

Query: 504 SLFYQVP-RSSSVPWNAIIS 522
            L   +P   ++  W ++++
Sbjct: 423 ELIKSIPFEPTASIWGSLLA 442



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 207/422 (49%), Gaps = 16/422 (3%)

Query: 14  CKLLPLLQAHRPLFS-----AAANSLQISPDCLENESREI---DFDDLFQSCTK---LHH 62
           CK+LP       L       A+    ++SP    +E   +   DF ++ Q C +   +  
Sbjct: 22  CKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVME 81

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            K  H   +       V  S  L+N Y+  G +  +R  FD +  R++ +WN+MI +Y R
Sbjct: 82  AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVF 179
               SEA+D F++     G +   +T   VL AC    D    KK+HC  +K   + +++
Sbjct: 142 NRMESEALDIFWEMR-NEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLY 200

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  +LL +Y + G+ N A ++F+ M  + S +W++M++GY QS N  EAL +    +   
Sbjct: 201 VGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMS 260

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           +  +  T++S++  C+    ++ G  +H  I K G   N+FV+++ ++MYAK G +R + 
Sbjct: 261 LEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESY 320

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            +F ++ E+++  WN+II+ + +   P      F  MQQ G+ P+ +T  SL S+     
Sbjct: 321 IIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 380

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 418
                R     +        +V+  + +VD+  + G+++ A  + + +P +   S W +L
Sbjct: 381 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSL 440

Query: 419 IT 420
           + 
Sbjct: 441 LA 442



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 90/186 (48%), Gaps = 3/186 (1%)

Query: 442 NEINPNQGT-YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
           +E N  Q + ++ IL   +  GA+ +    H + ++  L  DV ++  L++ Y KCG ++
Sbjct: 56  DEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVE 115

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A  +F  +   S V WN +I  +  +    +AL+ F +M +EG +    T  S+L+AC 
Sbjct: 116 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACG 175

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
            +    E ++  H +  +  +  +L     ++DL+ + G +  A    ++M  +   + W
Sbjct: 176 ANCDALECKK-LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVT-W 233

Query: 621 GALLGA 626
            +++  
Sbjct: 234 SSMVAG 239


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/686 (35%), Positives = 395/686 (57%), Gaps = 11/686 (1%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + +SC  L  +   + +H      G    V+  + LV  YA+ G L  +R  FD I  R+
Sbjct: 147 VVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERD 206

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
              WN M+   ++ G +  AV  F      SG  P+F T    L  C    +L+ G ++H
Sbjct: 207 CVLWNVMMDGCIKAGDVDGAVRLFRNMR-ASGCEPNFATLACFLSVCATDADLLSGAQLH 265

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K G E +V VA +LL MY +    + A +LF+ MP  D  +WN MISG  Q+G  V
Sbjct: 266 SLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFV 325

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA  +  +M+  G   D IT+ S+LP     + +  G  +H YIV++ +  ++F+ + L+
Sbjct: 326 EAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALV 385

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           ++Y K   +R A  ++D     DVV  +++I+ Y  +     A   F  + +  I+P+ +
Sbjct: 386 DIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAV 445

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+    A +      + +HG+++R   +     + +A++DMYAK G ++ +  +F  
Sbjct: 446 TIASVLPGCASMAALPLGQQIHGYVLRNA-YERKCYVESALMDMYAKCGRLDLSHYIFLK 504

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALR 465
           +  KD ++WN++I+ ++QNG   EA+++F+ M  C E I  N  T  + L A + + A+ 
Sbjct: 505 MSQKDEVTWNSMISSFSQNGKPQEALDLFRQM--CMEGIKYNNITISAALSACASLPAIY 562

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G +IH   IK  +  D+F  + L+DMY KCG ++ A+ +F  +P  + V WN+IIS +G
Sbjct: 563 YGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYG 622

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG   ++++    M +EG +PDH+TF++L++AC+H+GLV EG + F  M +++ I P +
Sbjct: 623 AHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRM 682

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +H+ CMVDL+ R+G L  A  FI +MP +PDA IWGALL ACR+H N+EL  +AS  LF+
Sbjct: 683 EHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +D  N GYYVLMSNI A  G+W+GV +VR L +D  + K PG+S ++VNN   +F   ++
Sbjct: 743 LDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDK 802

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVP 731
           +HP+ E IY  L+ L  +++  GYVP
Sbjct: 803 SHPESEDIYTSLKTLLQELREEGYVP 828



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 188/594 (31%), Positives = 317/594 (53%), Gaps = 21/594 (3%)

Query: 53  LFQSCTKLHHVK---RLHALLVVSGKIKT---VFSSTKLVNFYA---NLGDLSFSRHTFD 103
           + + C    H+    ++HA  VVSG +     +   T+L+  Y       D         
Sbjct: 38  VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFY--QFTLTSGLRPDFYTFPPVLKACRNLVD 161
             +  +   WN +I  +   G+   AV  FY   ++  +   PD +T P V+K+C  L  
Sbjct: 98  RAAAASSLPWNWLIRGFTAAGQHHLAV-LFYVKMWSHPAAPSPDAHTLPYVVKSCAALGA 156

Query: 162 ---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              G+ +H +   +G   DV+V ++L+ MY   GL   AR  FD +P RD   WN M+ G
Sbjct: 157 MSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDG 216

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
             ++G+   A+ +   MR  G   +  T+A  L VCA   ++LSG  +H   VK GLE  
Sbjct: 217 CIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPE 276

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           + V+N L+ MYAK   +  A R+F+ M + D+V+WN +I+   Q+   + A G F  MQ+
Sbjct: 277 VAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQR 336

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +G +PD +TLVSL   +  LN  +  + VHG+I+R    M DV + +A+VD+Y K   + 
Sbjct: 337 SGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNM-DVFLVSALVDIYFKCRDVR 395

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPA 457
            A  +++     DV+  +T+I+GY  NG++ EA+++F+ ++E+C  I PN  T  S+LP 
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQC--IKPNAVTIASVLPG 453

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + + AL  G +IH  V++N      +V + L+DMY KCGR+D +  +F ++ +   V W
Sbjct: 454 CASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTW 513

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           N++IS    +G+  +AL+ FRQM  EG++ ++IT  + L+AC+    +  G+   H +  
Sbjct: 514 NSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKE-IHGVTI 572

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           +  IK  +     ++D++ + G+L +A    + MP + + S W +++ A   HG
Sbjct: 573 KGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS-WNSIISAYGAHG 625


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/662 (37%), Positives = 375/662 (56%), Gaps = 47/662 (7%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCR--FGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           K++H   L+ G   D +V+ +L+  Y    F   N A K+F+ +P  +   +N +I G  
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+    +A+    +M +     +  T  ++   C  ++    G+ +H +++K GL  ++ 
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           + +  I MY  FG +  A R+  +    DV+ +N++I  Y +  +   A   F       
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELF------- 219

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG--NAVVDMYAKLGIIN 398
                                              W MED  +G  N +V   AK G+I 
Sbjct: 220 -----------------------------------WSMEDKNVGSWNVMVSGMAKCGMIE 244

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  +F  +  K+ ISW+ +I GY + G   EA+EVF +M+   EI P +    S+L A 
Sbjct: 245 EARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQR-EEIRPRKFVLSSVLAAC 303

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +++GAL QG  IHA V  N   FD  + T LVDMY KCGR+D A  +F ++ +     WN
Sbjct: 304 ANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWN 363

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           A+I   G+HG+ + A+  F +M  +  RP+ IT + +L+AC+HSG+V EG R F+ M+E 
Sbjct: 364 AMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEV 423

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           +GI+P ++HYGC+VDL GRAG LG A   + +MP+ P A++WGALLGACR HG++ELG  
Sbjct: 424 YGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGER 483

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
               L E++ +N G Y L+SNIYA  G+W+ V  VR L ++RG+K + G S I+ +  V 
Sbjct: 484 VGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVH 543

Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
            F  G+ +HP+ + IY  L+N+  ++K  G+ P+ S VL D+EE+EKE  L  HSE+LAI
Sbjct: 544 EFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAI 603

Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           AFG+I++ P + I + KNLR+C DCH+  K ISQ+ +REIIVRD  R+HHFK G CSC D
Sbjct: 604 AFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKD 663

Query: 819 YW 820
           +W
Sbjct: 664 FW 665



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 204/477 (42%), Gaps = 73/477 (15%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNVYT 112
           +S T LHH+K++HA+ + +G  +  + S  LV  YAN    +L+F+   F+++   NV+ 
Sbjct: 38  KSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFV 97

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSV 169
           +N +I   ++     +A+ C+Y+  +    RP+ +T+P + KAC       +G ++H  V
Sbjct: 98  FNIIIKGCLQNNEPCKAICCYYKMMIAHA-RPNKFTYPTLFKACTAAEAAEEGVQVHAHV 156

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARK------------------------------ 199
           +K G   DV + ++ + MY  FG    AR+                              
Sbjct: 157 IKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAK 216

Query: 200 -LFDDMPVRDSGSWN-------------------------------AMISGYCQSGNAVE 227
            LF  M  ++ GSWN                               AMI GY + G   E
Sbjct: 217 ELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKE 276

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL++ + M+ E +      ++S+L  CA    +  G  IH Y+  +   F+  +   L++
Sbjct: 277 ALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVD 336

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK G +  A  VF++M +++V +WN++I           A   F  MQ+   +P+ +T
Sbjct: 337 MYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGIT 396

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           L+ + S  A          +   +         +     VVD+  + G++  A  V   +
Sbjct: 397 LLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSM 456

Query: 408 PVKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
           P++   + W  L+    ++G       V +++    E+ P N G Y  +   Y+  G
Sbjct: 457 PMEPSAAVWGALLGACRKHGDVELGERVGKILL---ELEPQNSGRYALLSNIYARAG 510


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/721 (35%), Positives = 398/721 (55%), Gaps = 50/721 (6%)

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           + Y  N  +++Y +CG LS A   F      S   P+ +++  ++KA        KIH  
Sbjct: 42  STYLSNHFVNLYSKCGCLSYARAAF-----DSTEEPNVFSYNVIVKA---YAKDSKIH-- 91

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
                                      +AR+LFD+ P  D+ S+N +ISGY  +   V A
Sbjct: 92  ---------------------------IARQLFDENPQPDTVSYNTLISGYADARETVAA 124

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           + +   MR  G  +D  T++ ++  C    +++  L  H + V  G +    V+N  +  
Sbjct: 125 MVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIKQL--HCFAVSGGFDSYSSVNNAFVTY 182

Query: 289 YAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           Y+K G++R A+ VF  M   RD VSWNS+I AY Q  +   A   +  M   G + D+ T
Sbjct: 183 YSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI---INSACAVF 404
           L S+ + +  L+     R  HG +++ G F ++  +G+ ++D Y+K G    ++ +  VF
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGRDGMSDSEKVF 301

Query: 405 EGLPVKDVISWNTLITGYAQNGLASE-AIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           + +   D++ WNT+I+GY+ N   SE A++ F+ M+      P+  ++V +  A S++ +
Sbjct: 302 QEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSS 360

Query: 464 LRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
             QG +IH   IK N     + V   L+ +Y K G + DA  +F ++P  ++V +N +I 
Sbjct: 361 PSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIK 420

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G +AL  +++MLD G+ P++ITFV++L+AC+H G V EGQ+YF+ M+E F I+
Sbjct: 421 GYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIE 480

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY CM+DL GRAG L  A  FI  MP +P +  W ALLGACR H NM L   A+  
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKE 540

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L  +       YV+++N+YA+ GKWE +  VR   R + ++K PG S IEV  K  +F  
Sbjct: 541 LMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVA 600

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI---LTSHSERLAIA 759
            + +HP   ++ + L  +  KMK +GYV DK + +   +E  +      L  HSE+LA+A
Sbjct: 601 EDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVA 660

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++S+     I + KNLR+CGDCHN  KF+S +  REIIVRD+ RFH FKDG CSCGDY
Sbjct: 661 FGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDY 720

Query: 820 W 820
           W
Sbjct: 721 W 721



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 246/500 (49%), Gaps = 47/500 (9%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K LHAL V S    + + S   VN Y+  G LS++R  FD     NV+++N ++  Y + 
Sbjct: 28  KSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKD 87

Query: 124 GRLSEAVDCFYQ---------FTLTS---------------------GLRPDFYTFPPVL 153
            ++  A   F +          TL S                     G   D +T   ++
Sbjct: 88  SKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLI 147

Query: 154 KACRNLVDG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP-VRDSGS 211
            AC + VD  K++HC  +  GF+    V  + +  Y + GL   A  +F  M  +RD  S
Sbjct: 148 AACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVS 207

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN+MI  Y Q     +AL +  EM  +G  +D  T+AS+L      D+++ G   H  ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267

Query: 272 KHGLEFNLFVSNNLINMYAKFG---MMRHALRVFDQMMERDVVSWNSIIAAY----EQSN 324
           K G   N  V + LI+ Y+K G    M  + +VF +++  D+V WN++I+ Y    E S 
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSE 327

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           + + +   F  MQ+ G +PD  + V +TS  + L+     + +HG  ++       + + 
Sbjct: 328 EAVKS---FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVN 384

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           NA++ +Y K G +  A  VF+ +P  + +S+N +I GYAQ+G  +EA+ ++Q M +   I
Sbjct: 385 NALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSG-I 443

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDA 502
            PN  T+V+IL A +H G + +G K +   +K     +      +C++D+ G+ G++++A
Sbjct: 444 APNNITFVAILSACAHCGKVDEGQK-YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502

Query: 503 MSLFYQVP-RSSSVPWNAII 521
                 +P +  SV W A++
Sbjct: 503 ERFIDAMPYKPGSVAWAALL 522



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 212/483 (43%), Gaps = 78/483 (16%)

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME----------- 307
           ++ +G  +H   VK  +  + ++SN+ +N+Y+K G + +A   FD   E           
Sbjct: 23  DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVK 82

Query: 308 --------------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
                                D VS+N++I+ Y  + + + A   F  M++ G + D  T
Sbjct: 83  AYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFT 142

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           L  L  I A  +     + +H F +  G F     + NA V  Y+K G++  A +VF G+
Sbjct: 143 LSGL--IAACCDRVDLIKQLHCFAV-SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199

Query: 408 P-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
             ++D +SWN++I  Y Q+   ++A+ +++ M        +  T  S+L A + +  L  
Sbjct: 200 DGLRDEVSWNSMIVAYGQHKEGAKALALYKEM-IFKGFKIDMFTLASVLNALTSLDHLIG 258

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID---DAMSLFYQVPRSSSVPWNAIISC 523
           G + H ++IK     +  V + L+D Y KCG  D   D+  +F ++     V WN +IS 
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISG 318

Query: 524 HGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM-------- 574
           + ++ +  ++A+  FRQM   G RPD  +FV + +ACS+    S+G++   +        
Sbjct: 319 YSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPS 378

Query: 575 ---------------------MQEEFGIKPHLK--HYGCMVDLFGRAGHLGMAHNFIQNM 611
                                 +  F   P L    + CM+  + + GH   A    Q M
Sbjct: 379 NRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRM 438

Query: 612 ---PVRPDASIWGALLGACRIHGNMELGAVASDRL---FEVDSENVGYYVLMSNIYANVG 665
               + P+   + A+L AC   G ++ G    + +   F+++ E   +Y  M ++    G
Sbjct: 439 LDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPE-AEHYSCMIDLLGRAG 497

Query: 666 KWE 668
           K E
Sbjct: 498 KLE 500



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 16/281 (5%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGD---LSFSRHTFDHIS 106
           +  + T L H+   ++ H  L+ +G  +     + L++FY+  G    +S S   F  I 
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEIL 305

Query: 107 YRNVYTWNSMISVYVRCGRLS-EAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDG 162
             ++  WN+MIS Y      S EAV  F Q     G RPD  +F  V  AC NL     G
Sbjct: 306 SPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQG 364

Query: 163 KKIHCSVLKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           K+IH   +K     + + V  +L+ +Y + G    AR++FD MP  ++ S+N MI GY Q
Sbjct: 365 KQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQ 424

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G+  EAL +   M   G++ + IT  +IL  CA    +  G   +   +K   +     
Sbjct: 425 HGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQK-YFNTMKETFKIEPEA 483

Query: 282 SNN--LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            +   +I++  + G +  A R  D M  +   V+W +++ A
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 8/164 (4%)

Query: 64  KRLHALLVVSGKIKTVFS-STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           K++H L + S       S +  L++ Y   G+L  +R  FD +   N  ++N MI  Y +
Sbjct: 365 KQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQ 424

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VDGKKIHCSVLKLGF--EWDV 178
            G  +EA+   YQ  L SG+ P+  TF  +L AC +   VD  + + + +K  F  E + 
Sbjct: 425 HGHGTEALR-LYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEA 483

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 221
              + ++ +  R G    A +  D MP +  S +W A++ G C+
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL-GACR 526


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/611 (39%), Positives = 372/611 (60%), Gaps = 6/611 (0%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN--ILSGLLIHLYIVKH 273
           ++ +  +G   EAL     M   G   D +T + IL   A+     I  G  IH Y    
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           GL  N+ V   +I+MY K G +  A   F+++  ++ V+WN+++  Y+       A   F
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 334 TTM--QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM-EDVIIGNAVVDM 390
             M  +    +PD  +        + L D    R +H  + R G  + +DV++G A+++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 391 YAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           Y+K G +  A  VF+ +    D + WN +I  YAQ+G   +A+++++ M +  ++ P QG
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+V+++   + + AL+QG  IHARV       ++ V+  LV MYGKCG +D+A+ +F+ +
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
                + WN IIS +  HG  D+AL  +++M  +GV+P  +TFV LL+ACSH GLV++G 
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            YF+ MQ++  IKP + H+GC++DL GR G L  A   +++MP++ +A  W +LLGAC+ 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 630 HGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWS 689
           HG+++ G  A+D++ +      G YVL+SNIYA  G+W+ V+++R +   RG+KK+PG S
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480

Query: 690 SIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL 749
            IE+ + V  F +G+R+HP+ E+IY EL  +  +MK LGYVPD S V  D+EE+EKE +L
Sbjct: 481 WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLL 540

Query: 750 TSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
             HSE+LAI +G +  P KS ++I KNLRVC DCH  TKF+S+IT R+I+VRD+ RFH F
Sbjct: 541 VCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLF 600

Query: 810 KDGICSCGDYW 820
           ++G CSC DYW
Sbjct: 601 ENGSCSCRDYW 611



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 224/429 (52%), Gaps = 16/429 (3%)

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-----LVDGKKIHCSVLKLGFEWDVFVA 181
           SEA+  F++    SG RPD  TF  +L A        +  G++IH      G   +V V 
Sbjct: 11  SEAL-VFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVG 69

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM--RLEG 239
            +++ MY + G  + AR  F+++  ++S +WNAM++ Y   G   EAL++  EM  R   
Sbjct: 70  TAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRS 129

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF--NLFVSNNLINMYAKFGMMRH 297
              D  + +  +  C+  +++  G  IH  + + G E   ++ V   L+NMY+K G +  
Sbjct: 130 ARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEE 189

Query: 298 ALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIV 355
           A +VFD +  + D V WN++IAAY Q      A   + +M     + P   T V++  + 
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A+L+  +  R++H  + R   F  ++++ NA+V MY K G ++ A  VF  + +KD ISW
Sbjct: 250 AELSALKQGRAIHARV-RATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISW 308

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           NT+I+ YA +G + +A+ ++Q M +   + P + T+V +L A SH G +  G+    R+ 
Sbjct: 309 NTIISSYAYHGHSDQALLLYQEM-DLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQ 367

Query: 476 KN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
            +  +   V    C++D+ G+ GR+ +A  +   +P ++++V W +++     HG   + 
Sbjct: 368 DDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRG 427

Query: 534 LNFFRQMLD 542
           +    Q++D
Sbjct: 428 VRAADQVVD 436



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 202/428 (47%), Gaps = 35/428 (8%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H    +SG +  V   T +++ Y   G L  +R  F+ + ++N  TWN+M++ Y   
Sbjct: 51  REIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLD 110

Query: 124 GRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW--D 177
           GR  EA++ F +    S   RPD ++F   ++AC NL D   G++IH  + + G E   D
Sbjct: 111 GRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKD 170

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           V V  +LL+MY + G    ARK+FD +    DS  WNAMI+ Y Q G   +ALD+   M 
Sbjct: 171 VVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMH 230

Query: 237 LEGVSMDPI--TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
            +   + P   T  +++ VCA    +  G  IH  +     + NL VSN L++MY K G 
Sbjct: 231 -DTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGC 289

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  AL VF  M  +D +SWN+II++Y        A   +  M   G++P  +T V L S 
Sbjct: 290 LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSA 349

Query: 355 VAQLNDCRNSRSVHGFIMRRG----WFMED-------VIIGNAVVDMYAKLGIINSACAV 403
            +           HG ++  G    + M+D       V     ++D+  + G +  A  V
Sbjct: 350 CS-----------HGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELV 398

Query: 404 FEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            + +P++ + + W +L+     +G     +     +   + +    G YV +   Y+  G
Sbjct: 399 LKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV--VDRVPWTSGGYVLLSNIYAAAG 456

Query: 463 ALRQGIKI 470
             +   KI
Sbjct: 457 RWKDVEKI 464



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 144/291 (49%), Gaps = 13/291 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKI--KTVFSSTKLVNFYANLGDLSFSRHT 101
           +  F    ++C+ L  +   + +H +L   GK   K V   T L+N Y+  GDL  +R  
Sbjct: 134 KFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKV 193

Query: 102 FDHISY-RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
           FD I +  +   WN+MI+ Y + GR  +A+D +     T+ L P   TF  V+  C  L 
Sbjct: 194 FDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELS 253

Query: 161 ---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G+ IH  V    F+ ++ V+ +L+HMY + G  + A  +F  M ++D  SWN +IS
Sbjct: 254 ALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIIS 313

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK--HGL 275
            Y   G++ +AL +  EM L+GV    +T   +L  C+    +  G L + Y ++  H +
Sbjct: 314 SYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG-LDYFYRMQDDHRI 372

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND 325
           + ++     +I++  + G +  A  V   M ++ + V W S++ A +   D
Sbjct: 373 KPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGD 423


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/651 (38%), Positives = 360/651 (55%), Gaps = 62/651 (9%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           +V  +  L+  Y R G  + A ++F+DM V+ + +WN++++ + +     E    L E  
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-------NLFVSNNLINMY 289
            +     P TV         S NI+     H   V     F       ++   N +I+  
Sbjct: 100 PQ-----PNTV---------SYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISAL 145

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           A+ G+M  A R+F  M E++ VSW+++++ Y    D   A   F                
Sbjct: 146 AQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAP------------ 193

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
                                       M  VI   A++  Y K G +  A  +F+ + +
Sbjct: 194 ----------------------------MRSVITWTAMITGYMKFGRVELAERLFQEMSM 225

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           + +++WN +I GY +NG A + + +F+ M E   + PN  +  S+L   S++ AL+ G +
Sbjct: 226 RTLVTWNAMIAGYVENGRAEDGLRLFRTMLETG-VKPNALSLTSVLLGCSNLSALQLGKQ 284

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
           +H  V K  L  D    T LV MY KCG + DA  LF Q+PR   V WNA+IS +  HG 
Sbjct: 285 VHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGA 344

Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
           G KAL  F +M  EG++PD ITFV++L AC+H+GLV  G +YF+ M+ +FGI+   +HY 
Sbjct: 345 GKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYA 404

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GRAG L  A + I++MP +P  +I+G LLGACRIH N+ L   A+  L E+D  
Sbjct: 405 CMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPT 464

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
               YV ++N+YA   +W+ V  +R   +D  + K PG+S IE+N+ V  F + +R HP+
Sbjct: 465 IATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPE 524

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
              I+++L++L  KMK  GYVPD  FVL DV E+ KE +L  HSE+LAIAFG++  P   
Sbjct: 525 LASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGV 584

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PI++FKNLRVCGDCH+ TK+IS I  REIIVRD+ RFHHFKDG CSC DYW
Sbjct: 585 PIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 197/425 (46%), Gaps = 37/425 (8%)

Query: 98  SRHTFDH-ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-----GLRPDFYTFPP 151
           S HT  H  +  NV   N +I+ YVRCG +  AV  F    + S      +   F   P 
Sbjct: 28  SSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPG 87

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
             +  R L +      +V      +++ +A    H+    G+ + AR  FD MP++D  S
Sbjct: 88  HFEYARQLFEKIPQPNTV-----SYNIMLACHWHHL----GVHD-ARGFFDSMPLKDVAS 137

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN MIS   Q G   EA  +   M  E   +    + S    C   D  +          
Sbjct: 138 WNTMISALAQVGLMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLDAAVECFYA----- 191

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
                 ++     +I  Y KFG +  A R+F +M  R +V+WN++IA Y ++        
Sbjct: 192 --APMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLR 249

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            F TM + G++P+ L+L S+    + L+  +  + VH  + +      D   G ++V MY
Sbjct: 250 LFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCP-LSSDTTAGTSLVSMY 308

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           +K G +  A  +F  +P KDV+ WN +I+GYAQ+G   +A+ +F  M++   + P+  T+
Sbjct: 309 SKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKK-EGLKPDWITF 367

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSL 505
           V++L A +H G +  G++       N +  D  + T      C+VD+ G+ G++ +A+ L
Sbjct: 368 VAVLLACNHAGLVDLGVQYF-----NTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDL 422

Query: 506 FYQVP 510
              +P
Sbjct: 423 IKSMP 427



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 160/342 (46%), Gaps = 45/342 (13%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           S  +K V S   +++  A +G +  +R  F  +  +N  +W++M+S YV CG L  AV+C
Sbjct: 129 SMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVEC 188

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           FY   + S                                     V    +++  Y +FG
Sbjct: 189 FYAAPMRS-------------------------------------VITWTAMITGYMKFG 211

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
              +A +LF +M +R   +WNAMI+GY ++G A + L +   M   GV  + +++ S+L 
Sbjct: 212 RVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLL 271

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C+    +  G  +H  + K  L  +     +L++MY+K G ++ A  +F Q+  +DVV 
Sbjct: 272 GCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVC 331

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS--LTSIVAQLNDCRNSRSVHGF 370
           WN++I+ Y Q      A   F  M++ G++PD +T V+  L    A L D      V  F
Sbjct: 332 WNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDL----GVQYF 387

Query: 371 -IMRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK 410
             MRR + +E      A +VD+  + G ++ A  + + +P K
Sbjct: 388 NTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 51/321 (15%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H L+          + T LV+ Y+  GDL  +   F  I  ++V  WN+MIS Y + 
Sbjct: 283 KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQH 342

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G   +A+  F +     GL+PD+ TF  VL AC         H  ++ LG ++       
Sbjct: 343 GAGKKALRLFDEMK-KEGLKPDWITFVAVLLACN--------HAGLVDLGVQY------- 386

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
              M   FG+                  +  M+    ++G   EA+D++  M  +     
Sbjct: 387 FNTMRRDFGIETKPEH------------YACMVDLLGRAGKLSEAVDLIKSMPFKP---H 431

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN---NLINMYAKFGMMRHALR 300
           P    ++L  C     I   L +  +  K+ LE +  ++     L N+YA      H   
Sbjct: 432 PAIYGTLLGAC----RIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVAS 487

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +   M + +VV     I  Y         HGF ++ +   + P+      L SI  +L D
Sbjct: 488 IRRSMKDNNVVK----IPGYSWIEINSVVHGFRSSDR---LHPE------LASIHEKLKD 534

Query: 361 CRNSRSVHGFIMRRGWFMEDV 381
                 + G++    + + DV
Sbjct: 535 LEKKMKLAGYVPDLEFVLHDV 555


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/616 (38%), Positives = 357/616 (57%), Gaps = 46/616 (7%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLY 269
           +N +I     S    +AL +   MR  G +  P   T    L  C+ S ++L GL IH  
Sbjct: 89  FNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSA 148

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS---NDP 326
           + K  L+ N++V+++ I+MY++ G    A RVFD M  RDVVSWN++IA + +    +  
Sbjct: 149 VAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRA 208

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIV--AQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           I     F  +Q  G  PD  T+  +   +  A+ +D R       F+ R           
Sbjct: 209 IEVFKQFVVLQ--GSMPDAGTMAGILPAMGNAKPDDIR-------FVRR----------- 248

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
                             VF+ +  K++ISWN ++  YA N    +A+E+F +ME+ +E+
Sbjct: 249 ------------------VFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEK-DEV 289

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P+  T  ++LP    + A   G +IH  + +  +C ++ +   L+DMY  CG + DA  
Sbjct: 290 EPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDARE 349

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F  +     + W +IIS +G HG G +A++ F +ML +G+ PD I FV++L ACSH+GL
Sbjct: 350 IFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGL 409

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           +++G+ YF  M   + I P  +HY CMVDL GRAG +  A++FI  M + P+  +WGALL
Sbjct: 410 LADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALL 469

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            ACRIH NM++G VA+D LF +  E  GYYVL+SN+YA  G+W  V  VRS+  ++G+KK
Sbjct: 470 QACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKK 529

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S +E+ ++V  F+ G+R HP+ E IY +L  L  K++ +GY P+    L DVEE++
Sbjct: 530 FPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEED 589

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KE  L+ HSE+LAIAF ++++ P + I++  NLR C DCH   K IS IT REI+++D+N
Sbjct: 590 KEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTN 649

Query: 805 RFHHFKDGICSCGDYW 820
           R HH   G+CSCGDYW
Sbjct: 650 RIHHIVQGVCSCGDYW 665



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 200/404 (49%), Gaps = 55/404 (13%)

Query: 144 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YT+P  LK+C   ++L+ G +IH +V KL  + +V+VA S + MY R G    A ++
Sbjct: 121 PDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRV 180

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE-MRLEGVSMDPITVASILPVC--ARS 257
           FD MP RD  SWNAMI+G+ + G    A+++  + + L+G   D  T+A ILP    A+ 
Sbjct: 181 FDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKP 240

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           D+I                                   R   RVFD M  ++++SWN+++
Sbjct: 241 DDI-----------------------------------RFVRRVFDNMQFKELISWNAML 265

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           A Y  +   + A   F  M++  ++PD +TL ++     +L+     + +H  I R+   
Sbjct: 266 AVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKN-M 324

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             ++++ NA++DMYA  G +  A  +F+ +  +DVISW ++I+ Y ++G   EA+++F+ 
Sbjct: 325 CPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEK 384

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQG------IKIHARVIKNCLCFDVFVATCLVD 491
           M     + P+   +V++L A SH G L  G      +     +I     +     TC+VD
Sbjct: 385 MLG-QGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHY-----TCMVD 438

Query: 492 MYGKCGRIDDAMSLFYQ-VPRSSSVPWNAIISCHGIHGQGDKAL 534
           + G+ G I++A       +   +   W A++    IH   D  L
Sbjct: 439 LLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGL 482



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 30/324 (9%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V+ +   ++ Y+  G    +   FD + +R+V +WN+MI+ + R G    A++ F QF
Sbjct: 156 RNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQF 215

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            +  G  PD  T   +L A  N                               RF     
Sbjct: 216 VVLQGSMPDAGTMAGILPAMGNAKPDD-------------------------IRF----- 245

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
            R++FD+M  ++  SWNAM++ Y  +   V+A+++   M  + V  D IT+A++LP C  
Sbjct: 246 VRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGE 305

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                 G  IH  I +  +  NL + N L++MYA  G ++ A  +FD M  RDV+SW SI
Sbjct: 306 LSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSI 365

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+AY +      A   F  M   G++PD +  V++ +  +      + +     +  R  
Sbjct: 366 ISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYH 425

Query: 377 FMEDVIIGNAVVDMYAKLGIINSA 400
            +        +VD+  + G IN A
Sbjct: 426 IIPKAEHYTCMVDLLGRAGCINEA 449



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 42  ENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           E E   I    +   C +L      KR+H ++        +     L++ YA+ G L  +
Sbjct: 288 EVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDA 347

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
           R  FD +S R+V +W S+IS Y + G   EAVD F +  L  GL PD   F  VL AC +
Sbjct: 348 REIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKM-LGQGLEPDSIAFVAVLAACSH 406

Query: 159 ---LVDGK 163
              L DGK
Sbjct: 407 AGLLADGK 414


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/603 (39%), Positives = 350/603 (58%), Gaps = 35/603 (5%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L  CAR  +   G  +H +I+K G++    +SNNLINMY K G+++ AL +F+Q+  RD 
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 311 VSWNSIIAAYEQSNDP-ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           +SW SI+ A  Q+N P +T   F    +Q G+QPD      L    A L   +  + VH 
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129

Query: 370 -FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            FI+      +D ++ +++VDMYAK G+ +    VF+ +  K+ ISW  +I+GYAQ+G  
Sbjct: 130 TFIVSP--VSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRK 187

Query: 429 SEAIEVFQMMEECNEIN--------PNQGTYV-----------------------SILPA 457
            +AI++FQ M   N ++           G +V                       SI+ A
Sbjct: 188 LDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGA 247

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +++  L  G +IH  VI       +FV+  LVDMY KC  +  A  +F ++ +   V W
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSW 307

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
            +II     HG  ++AL+ + +ML  G++P+ +TFV L+ ACSH GLVS+G+ +F+ M +
Sbjct: 308 TSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           ++GI P L+HY C++DL  R+GHL  A N I+ MP +PD + W ALL AC  H N  +G 
Sbjct: 368 DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGI 427

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             +D L  +  E+   Y+L+SNIYA+   WE V +VR L     +KK PG+S I +  + 
Sbjct: 428 RVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKES 487

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
            +F  G  +HP  E+I+  L  L A+MK  GY+PD S VL D+E+ EKE  L  HSERLA
Sbjct: 488 QVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLA 547

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +A+G++   P   + I KNLRVCGDCH   KFIS I +REI+VRD+NR+HHFKDG CSC 
Sbjct: 548 VAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCN 607

Query: 818 DYW 820
           ++W
Sbjct: 608 NFW 610



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 184/394 (46%), Gaps = 36/394 (9%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K+LH  ++ +G  +    S  L+N Y   G +  + + F+ + +R+  +W S+++   + 
Sbjct: 23  KKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQA 82

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
                 +  F       GL+PD Y F  ++KAC  L     GK++H + +      D  V
Sbjct: 83  NLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVV 142

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD------- 233
            +SL+ MY + GL ++ R +FD +  ++S SW AMISGY QSG  ++A+ +         
Sbjct: 143 KSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL 202

Query: 234 ------------------------EMRLEGVSM-DPITVASILPVCARSDNILSGLLIHL 268
                                   EMR +G+ + DP  ++SI+   A    +  G  IH 
Sbjct: 203 LSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHC 262

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            ++  G E +LFVSN L++MYAK   +  A ++F +M++RD+VSW SII    Q      
Sbjct: 263 LVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEE 322

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   +  M   G++P+ +T V L    + +      R     +++       +     ++
Sbjct: 323 ALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLL 382

Query: 389 DMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
           D+ ++ G +  A  + + +P K D  +W  L++ 
Sbjct: 383 DLLSRSGHLEEAENLIKAMPFKPDEATWAALLSA 416



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 190/396 (47%), Gaps = 37/396 (9%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GKK+HC ++K G +    ++ +L++MY + GL   A  LF+ +P RD  SW ++++   Q
Sbjct: 22  GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81

Query: 222 SGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           +      L +   M + +G+  D    A ++  CA    +  G  +H   +   +  +  
Sbjct: 82  ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT----- 335
           V ++L++MYAK G+      VFD +  ++ +SW ++I+ Y QS   + A   F       
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKN 201

Query: 336 --------------------------MQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRSVH 368
                                     M+  GI   D   L S+    A L      + +H
Sbjct: 202 LLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIH 261

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             ++  G +   + + NA+VDMYAK   + +A  +F  +  +D++SW ++I G AQ+GLA
Sbjct: 262 CLVILLG-YESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVAT 487
            EA+ ++  M     + PN+ T+V ++ A SHVG + +G      +IK+  +   +   T
Sbjct: 321 EEALSLYNRMLSTG-LKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYT 379

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
           CL+D+  + G +++A +L   +P +     W A++S
Sbjct: 380 CLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLS 415



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 352 TSIVAQLNDCRNSRS------VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           + +V QL  C   +S      +H  I++ G   +   + N +++MY K G+I  A  +F 
Sbjct: 4   SHLVYQLQACARHQSPPIGKKLHCHIIKTG-IDQCKSLSNNLINMYGKCGLIQDALNLFN 62

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            LP +D ISW +++T   Q  L    + +F  M + + + P+   +  ++ A + +GA++
Sbjct: 63  QLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMK 122

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           QG ++HA  I + +  D  V + LVDMY KCG  D    +F  +   +S+ W A+IS + 
Sbjct: 123 QGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYA 182

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
             G+   A+  F++M  + +    +++ +L++    SG
Sbjct: 183 QSGRKLDAIQLFQKMPVKNL----LSWTALISGLVQSG 216


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/539 (41%), Positives = 321/539 (59%), Gaps = 33/539 (6%)

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WNS + A  + + PI A   F  ++Q  + PD  T  S+      L D  N R +HG + 
Sbjct: 96  WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN---------------- 416
           + G F  ++ + N +V +YA  G +  A  +FE +P +DV++WN                
Sbjct: 156 KVG-FRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY 214

Query: 417 ---------------TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
                          ++I GY Q G A EAI +F  MEE   +  N+ T V++L A + +
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAG-VKCNEVTVVAVLAACADL 273

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL  G++IH    ++    +V ++  L+DMY KCG +++A  +F ++   + V W+A+I
Sbjct: 274 GALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMI 333

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
               +HG+ ++AL  F  M   G+ P+ +TF+ LL ACSH GL+SEG+R+F  M  ++GI
Sbjct: 334 GGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGI 393

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P ++HYGCMVDL  RAG L  AH FI NMP++P+  +WGALLGACR+H N+E+   A  
Sbjct: 394 IPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIK 453

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L E+D  N GYYV++SNIYA  G+WE    VR   +DR +KKTPGWSSI V+  V  F 
Sbjct: 454 HLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFV 513

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            G  +HP  E+I+     L  +M+  GYVP+ S VL D+EE EK   ++ HSE+LA+ FG
Sbjct: 514 AGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFG 573

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++P ++PI+I KNLR+C DCH+  K IS I  REI+VRD NRFH F D  CSC DYW
Sbjct: 574 LMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 221/483 (45%), Gaps = 53/483 (10%)

Query: 26  LFSAAANSLQISPD-----CLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVF 80
           LF+ ++  +  SP+      ++ +S E    DL ++      ++++HA ++ +    ++ 
Sbjct: 2   LFALSSFPIPQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSIL 61

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRN--VYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
             T++    A      +++  F  +  +    + WNS +          +A+  FY+   
Sbjct: 62  PLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLR- 120

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
              + PD +T   VL+AC NL+D   G+ +H  V K+GF  ++++   ++H+Y   G   
Sbjct: 121 QYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMG 180

Query: 196 VARKLFDDMPVRDSGSWN-------------------------------AMISGYCQSGN 224
            AR LF+ MP RD  +WN                               +MI+GY Q G 
Sbjct: 181 EARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGK 240

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           A EA+ +  +M   GV  + +TV ++L  CA    +  G+ IH Y  +HG + N+ +SN 
Sbjct: 241 AKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNT 300

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI+MY K G +  A +VF++M ER VVSW+++I           A   F+ M Q GI+P+
Sbjct: 301 LIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPN 360

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T + L    + +      R     + R    +  +     +VD+ ++ G+++ A    
Sbjct: 361 GVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFI 420

Query: 405 EGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYS 459
             +P+K + + W  L+     +    +A EAI+         E++P N G YV +   Y+
Sbjct: 421 LNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLL------ELDPLNDGYYVVLSNIYA 474

Query: 460 HVG 462
             G
Sbjct: 475 EAG 477


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/669 (36%), Positives = 379/669 (56%), Gaps = 8/669 (1%)

Query: 157 RNLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
           R+ + G+ +H  +L+        F+   L++MY +  L N A+ +      R   +W ++
Sbjct: 21  RSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSL 80

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           ISG   +     AL     MR E V  +  T   +    A     ++G  +H   +K G 
Sbjct: 81  ISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGN 140

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             ++FV  +  +MY+K G+   A  +FD+M  R++ +WN+ ++   Q    + A   F  
Sbjct: 141 ILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKK 200

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
                 +P+ +T  +  +  A +      R +HGFI+R   + EDV + N ++D Y K G
Sbjct: 201 FLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVR-SRYREDVSVFNGLIDFYGKCG 259

Query: 396 IINSACAVFE--GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            I S+  VF   G   ++V+SW +L+    QN     A  VF  ++   E+ P      S
Sbjct: 260 DIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVF--LQARKEVEPTDFMISS 317

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +L A + +G L  G  +HA  +K C+  ++FV + LVD+YGKCG I+ A  +F ++P  +
Sbjct: 318 VLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERN 377

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDE--GVRPDHITFVSLLTACSHSGLVSEGQRY 571
            V WNA+I  +   G  D AL+ F++M     G+   ++T VS+L+ACS +G V  G + 
Sbjct: 378 LVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQI 437

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F  M+  +GI+P  +HY C+VDL GR+G +  A+ FI+ MP+ P  S+WGALLGAC++HG
Sbjct: 438 FESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHG 497

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
             +LG +A+++LFE+D ++ G +V+ SN+ A+ G+WE    VR   RD G+KK  G+S +
Sbjct: 498 KTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWV 557

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
            V N+V +F   +  H K  +I   L  L  +MK  GYVPD +  L D+EE+EK   +  
Sbjct: 558 AVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWY 617

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE++A+AFG+I+ P   PI+I KNLR+C DCH+  KFIS+I  REIIVRD+NRFH FKD
Sbjct: 618 HSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKD 677

Query: 812 GICSCGDYW 820
           G CSC DYW
Sbjct: 678 GWCSCKDYW 686



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 188/393 (47%), Gaps = 17/393 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  +F++   LH     K+LHAL +  G I  VF      + Y+  G    +R+ FD
Sbjct: 109 DFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFD 168

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            + +RN+ TWN+ +S  V+ GR  +A+  F +F    G  P+  TF   L AC ++V   
Sbjct: 169 EMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDG-EPNAITFCAFLNACADIVSLE 227

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISG 218
            G+++H  +++  +  DV V   L+  Y + G    +  +F  +    R+  SW ++++ 
Sbjct: 228 LGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAA 287

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
             Q+     A  +  + R E V      ++S+L  CA    +  G  +H   +K  +E N
Sbjct: 288 LVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALALKACVEEN 346

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           +FV + L+++Y K G + +A +VF +M ER++V+WN++I  Y    D   A   F  M  
Sbjct: 347 IFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTS 406

Query: 339 A--GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKL 394
              GI    +TLVS+ S  ++       R +  F   RG +  +    +   VVD+  + 
Sbjct: 407 GSCGIALSYVTLVSVLSACSRAGAVE--RGLQIFESMRGRYGIEPGAEHYACVVDLLGRS 464

Query: 395 GIINSACAVFEGLPVKDVIS-WNTLITGYAQNG 426
           G+++ A    + +P+   IS W  L+     +G
Sbjct: 465 GLVDRAYEFIKRMPILPTISVWGALLGACKMHG 497


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/669 (35%), Positives = 393/669 (58%), Gaps = 9/669 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEW---DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
           +NL  G+ IH  +      +    V    SL+++Y +    ++ARKLFD MP R+  SW+
Sbjct: 33  KNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWS 92

Query: 214 AMISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           A+++GY Q+GN +E  ++  +M + + +  +   +A+ +  C  S   + G   H Y +K
Sbjct: 93  ALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGKQCHGYALK 151

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            GLEF+ +V N LI +Y+K   +  A+++   +   D+  +N ++    Q      A   
Sbjct: 152 SGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDV 211

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
              +   GI+ +  T V++  + A L D    + VH  +++      DV IG++++DMY 
Sbjct: 212 LKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSD-IDCDVYIGSSIIDMYG 270

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME-ECNEINPNQGTY 451
           K G + S    F+ L  ++V+SW ++I  Y QN    EA+ +F  ME +C  I PN+ T 
Sbjct: 271 KCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDC--IPPNEYTM 328

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
             +  + + + AL  G ++HAR  K+ L  +V V   L+ MY K G I  A S+F  +  
Sbjct: 329 AVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTC 388

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
            + + WNAII+ H  HG G +AL+ F+ M+  G RP+++TF+ ++ AC+H  LV EG  Y
Sbjct: 389 CNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYY 448

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F+ + ++F I P L+HY C+V L  R+G L  A NF+++  +  D   W  LL AC +H 
Sbjct: 449 FNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHK 508

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           + + G   ++ L +++  +VG Y+L+SN++A V +W+ V E+R L R+R +KK PG S +
Sbjct: 509 HYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWL 568

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           E+ N   +F + +  HP+   IY+ +++L +K++ LGYVPD   VL D+E+++K   L+ 
Sbjct: 569 EIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSY 628

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE+LA+A+G++ +P  +PI + KNLR+C DCH   K IS++  R I+VRD+NRFHHF++
Sbjct: 629 HSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQN 688

Query: 812 GICSCGDYW 820
           G CSCGDYW
Sbjct: 689 GCCSCGDYW 697



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 240/466 (51%), Gaps = 18/466 (3%)

Query: 64  KRLHALLVVSG---KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
           + +HA L ++    +   V     L+N Y    ++S +R  FD +  RNV +W+++++ Y
Sbjct: 39  RTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGY 98

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVDGKKIHCSVLKLGFEWDV 178
           ++ G   E  + F +  +   + P+ Y     + +C  +  V+GK+ H   LK G E+  
Sbjct: 99  MQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQ 158

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           +V  +L+ +Y +      A ++   +P  D   +N +++G  Q  +  EA+D+L  +  E
Sbjct: 159 YVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISE 218

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G+  +  T  +I  +CA   +I  G  +H  ++K  ++ ++++ +++I+MY K G +   
Sbjct: 219 GIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSG 278

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
              FD++  R+VVSW SIIAAY Q+     A   F+ M+   I P+  T+  L +  A L
Sbjct: 279 RTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGL 338

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +       +H    + G    +V++GNA++ MY K G I +A +VF  +   ++I+WN +
Sbjct: 339 SALCLGDQLHARAEKSG-LKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAI 397

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           ITG++ +GL  EA+ +FQ M    E  PN  T++ ++ A +H+  + +G      ++K  
Sbjct: 398 ITGHSHHGLGKEALSMFQDMMATGE-RPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQ- 455

Query: 479 LCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
             F +       TC+V +  + GR+D+A +      RS  + W+ +
Sbjct: 456 --FRIVPGLEHYTCIVGLLSRSGRLDEAENFM----RSHQINWDVV 495


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/677 (36%), Positives = 383/677 (56%), Gaps = 47/677 (6%)

Query: 149 FPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           F P++ A   L    +IH  +       +  V   L+   C     + A  +F      +
Sbjct: 43  FIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPN 102

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              +NA+I G  ++     ++     M    +  D +T+  +L   A   ++  G  +H 
Sbjct: 103 LFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHG 162

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD----VVSWNSIIAAYEQSN 324
            ++K GLEF+ FV  +L++MY K G +   L++FD+  +R+    ++ WN +I    +  
Sbjct: 163 GVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVG 222

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           D   A   F  M +                       RN+ S         W        
Sbjct: 223 DLSKAASLFEAMPE-----------------------RNAGS---------W-------- 242

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNE 443
           N++++ + + G ++ A  +F  +P K+V+SW T+I G++QNG   +A+ +F +M+EE   
Sbjct: 243 NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEG-- 300

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN  T VS L A + +GAL+ G +IH  +  N    +  + T LVDMY KCG I  A 
Sbjct: 301 VRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSAS 360

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F +      + W+ +I    IHG  D+AL  F +M   G+ PD + F+++LTACSHSG
Sbjct: 361 RVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSG 420

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            V +G  +F  M+ ++ I+P +KHY  +VDL GRAG L  A +FIQ+MP+ PD  IWGAL
Sbjct: 421 NVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGAL 480

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
             ACR H N+E+  + +++L +++ ++ G YV +SN+YA VG+WE V+ VR+L ++RG++
Sbjct: 481 FCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVE 540

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           K PGWS IEV  +V  F  G+  H + E+I  +L  +TA  K  GY+P+ ++VL ++EE+
Sbjct: 541 KDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEE 600

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EKE  L SHSE+LA+AFG+IS+ P S I+I KNLRVCGDCH+  K+ S+++ REII+RD 
Sbjct: 601 EKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDI 660

Query: 804 NRFHHFKDGICSCGDYW 820
            RFHHFKDG CSCGDYW
Sbjct: 661 KRFHHFKDGTCSCGDYW 677



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 215/498 (43%), Gaps = 89/498 (17%)

Query: 43  NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           + S E  F  L  +   L  + ++HA + +          T+L++   +L  L ++   F
Sbjct: 36  SRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIF 95

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD- 161
               + N++ +N++I       R   +V  F    L   +RPD  T P VLK+   LVD 
Sbjct: 96  RCFDHPNLFVFNALIRGLAENSRFEGSVSHFV-LMLRLSIRPDRLTLPFVLKSVAALVDV 154

Query: 162 --GKKIHCSVLKLGFEWDVFVAASLLHMY------------------------------- 188
             G+ +H  V+KLG E+D FV  SL+ MY                               
Sbjct: 155 GLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVL 214

Query: 189 ----CRFGLANVARKLFDDMPVRDSGSWNA------------------------------ 214
               C+ G  + A  LF+ MP R++GSWN+                              
Sbjct: 215 INGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWT 274

Query: 215 -MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
            MI+G+ Q+G+  +AL +   M  EGV  + +TV S L  C +   +  G  IH Y+  +
Sbjct: 275 TMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSN 334

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G + N  +   L++MYAK G ++ A RVF +   +D+++W+ +I  +        A   F
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 394

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWFMEDVIIG-NAV 387
             M+ AGI PD +  +++      L  C +S +V   +     MR  + +E  +     +
Sbjct: 395 VKMKSAGINPDEVIFLAI------LTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLI 448

Query: 388 VDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMM-EECNEIN 445
           VD+  + G ++ A +  + +P+  D + W  L         A + IE+ ++  E+  ++ 
Sbjct: 449 VDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACR----AHKNIEMAELTAEKLLQLE 504

Query: 446 PNQ-GTYVSILPAYSHVG 462
           P   G+YV +   Y+ VG
Sbjct: 505 PKHPGSYVFLSNVYAAVG 522



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 14/251 (5%)

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P++      +P       L Q  +IHA++  + L  +  V T L+        +D A+S+
Sbjct: 35  PSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSI 94

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
           F      +   +NA+I     + + + +++ F  ML   +RPD +T   +L +   + LV
Sbjct: 95  FRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSV--AALV 152

Query: 566 SEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS---IWG 621
             G  R  H    + G++        +VD++ + G LG         P R  A    +W 
Sbjct: 153 DVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN 212

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSE-NVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
            L+  C   G++   A     LFE   E N G +  + N +   G    +D  R L    
Sbjct: 213 VLINGCCKVGDLSKAA----SLFEAMPERNAGSWNSLINGFVRNGD---LDRARELFVQM 265

Query: 681 GLKKTPGWSSI 691
             K    W+++
Sbjct: 266 PEKNVVSWTTM 276


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/643 (36%), Positives = 370/643 (57%), Gaps = 8/643 (1%)

Query: 184  LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
            L+ MYC+     +A K+FD MP R+  SW A++SG+  +G+   +L +  EM  +G+  +
Sbjct: 410  LIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPN 469

Query: 244  PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
              T ++ L  C   + +  GL IH + +K G E  + V N+L++MY+K G +  A +VF 
Sbjct: 470  EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 529

Query: 304  QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ--PDLLTLVSLTSIVAQLNDC 361
             M+ R ++SWN++IA Y  +     A   F  MQ+A I+  PD  TL SL    +     
Sbjct: 530  WMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMI 589

Query: 362  RNSRSVHGFIMRRGWFM-EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + +HGF++R G+       I  ++VD+Y K G + SA   F+ +  K +ISW++LI 
Sbjct: 590  YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLIL 649

Query: 421  GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            GYAQ G   EA+ +F+ ++E +    +     SI+  ++    L+QG ++ A V+K    
Sbjct: 650  GYAQEGDFVEAMGLFKRLQELSS-QIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSG 708

Query: 481  FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             +  V+  LVDMY KCG +D+A   F ++     + W  +I+ +G HG G KA++ F +M
Sbjct: 709  LETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKM 768

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            L   + PD + ++++L+ACSHSG++ EG+  F  + E  GIKP ++HY C+VDL GRAG 
Sbjct: 769  LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGR 828

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A + +  MP++P+  IW  LL  CR+HG++ELG      L  +D +N   YV+MSN+
Sbjct: 829  LKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNL 888

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            Y   G W      R L   +GL+K  G S +E+  +V  F +G  +HP    I + L+ +
Sbjct: 889  YGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEV 948

Query: 721  TAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS---SPPKSPIQIFKN 776
              +++  LGYV      L D++++ KE  L +HSE+LAI   + +   +     I++FKN
Sbjct: 949  ERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKN 1008

Query: 777  LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
            LRVC DCH + K +S+IT+   +VRD+ RFH F+DG CSCGDY
Sbjct: 1009 LRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 256/485 (52%), Gaps = 12/485 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           + ++C  L  +   ++   +SG    + +S  L++ Y    +   +   FD +  RNV +
Sbjct: 378 VLENCYVLEFIIFTNSNFRLSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVS 437

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV 169
           W +++S +V  G L+ ++  F +     G+ P+ +TF   LKAC     L  G +IH   
Sbjct: 438 WTALMSGHVLNGDLNGSLSLFTEMG-RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFC 496

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           LK+GFE  V V  SL+ MY + G  N A K+F  M  R   SWNAMI+GY  +G    AL
Sbjct: 497 LKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRAL 556

Query: 230 DILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLE--FNLFVSNNL 285
                M+   +   P   T+ S+L  C+ +  I +G  IH ++V+ G     +  ++ +L
Sbjct: 557 ATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSL 616

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +++Y K G +  A + FDQ+ E+ ++SW+S+I  Y Q  D + A G F  +Q+   Q D 
Sbjct: 617 VDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDS 676

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
             L S+  + A     +  + +   +++    +E   + N++VDMY K G+++ A   F 
Sbjct: 677 FVLSSIIGVFADFALLQQGKQMQALVVKLPSGLE-TSVSNSLVDMYLKCGLVDEAEKCFA 735

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            + +KDVISW  +ITGY ++GL  +A+ +F  M   N I P++  Y+++L A SH G ++
Sbjct: 736 EMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHN-IEPDEVCYLAVLSACSHSGMIK 794

Query: 466 QGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISC 523
           +G ++ +++++   +   V    C+VD+ G+ GR+ +A  L   +P   +V  W  ++S 
Sbjct: 795 EGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSL 854

Query: 524 HGIHG 528
             +HG
Sbjct: 855 CRVHG 859



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 208/462 (45%), Gaps = 53/462 (11%)

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
           G   NL  SN LI+MY K      A +VFD M ER+VVSW ++++ +  + D   +   F
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           T M + GI P+  T  +       LN       +HGF ++ G+ M  V +GN++VDMY+K
Sbjct: 459 TEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM-VEVGNSLVDMYSK 517

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN-EINPNQGTYV 452
            G IN A  VF  +  + +ISWN +I GY   G  S A+  F MM+E   +  P++ T  
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCL-C-FDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           S+L A S  G +  G +IH  ++++   C     +   LVD+Y KCG +  A   F Q+ 
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL-------------- 556
             + + W+++I  +   G   +A+  F+++ +   + D     S++              
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697

Query: 557 -------------TACSHS--------GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
                        T+ S+S        GLV E ++ F  MQ +  I      +  M+  +
Sbjct: 698 MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVIS-----WTVMITGY 752

Query: 596 GRAGHLGMAHNFIQNM---PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD--SEN 650
           G+ G    A +    M    + PD   + A+L AC   G ++ G     +L E       
Sbjct: 753 GKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPR 812

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG-WSSI 691
           V +Y  + ++    G+   + E + L     +K   G W ++
Sbjct: 813 VEHYACVVDLLGRAGR---LKEAKHLVDTMPIKPNVGIWQTL 851



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 196/426 (46%), Gaps = 12/426 (2%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  F    ++C  L+ +++   +H   +  G    V     LV+ Y+  G ++ +   F 
Sbjct: 470 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 529

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRN---L 159
            +  R++ +WN+MI+ YV  G  S A+  F          RPD +T   +LKAC +   +
Sbjct: 530 WMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMI 589

Query: 160 VDGKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
             GK+IH  +++ GF       +  SL+ +Y + G    ARK FD +  +   SW+++I 
Sbjct: 590 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLIL 649

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY Q G+ VEA+ +   ++     +D   ++SI+ V A    +  G  +   +VK     
Sbjct: 650 GYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGL 709

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
              VSN+L++MY K G++  A + F +M  +DV+SW  +I  Y +      A   F  M 
Sbjct: 710 ETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKML 769

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           +  I+PD +  +++ S  +     +    +   ++        V     VVD+  + G +
Sbjct: 770 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRL 829

Query: 398 NSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
             A  + + +P+K +V  W TL++    +G      EV +++   +  NP    YV +  
Sbjct: 830 KEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNP--ANYVMMSN 887

Query: 457 AYSHVG 462
            Y   G
Sbjct: 888 LYGQAG 893


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 271/772 (35%), Positives = 440/772 (56%), Gaps = 22/772 (2%)

Query: 63   VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            ++++ A +  SG ++ ++ S+ LV+ +A  G    +++ F+ +  RNV + N ++   V+
Sbjct: 301  LEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 360

Query: 123  CGRLSEAVDCFYQFTLTSGLRPDFYTFP-------PVLKACRNLVDGKKIHCSVLKLGF- 174
              +   A   F++     G+  D Y           VL+  R    G+++H  V++ G  
Sbjct: 361  QKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRR--KGREVHAHVIRTGLN 418

Query: 175  EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
            +  V +   L++MY + G    A  +F+ M  +DS SWN++ISG  Q+  + +A +    
Sbjct: 419  DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHR 478

Query: 235  MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
            MR  G      T+ S L  CA    I+ G  IH   +K GL+ ++ VSN L+ +YA+ G 
Sbjct: 479  MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 538

Query: 295  MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTS 353
                L+VF  M E D VSWNS+I A   S   ++ A  +F  M + G     +T +++ S
Sbjct: 539  FTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILS 598

Query: 354  IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDV 412
             V+ L+    S  +H  +++     +D  IGNA++  Y K G +N    +F  +   +D 
Sbjct: 599  AVSSLSLHEVSHQIHALVLKYC-LSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDE 657

Query: 413  ISWNTLITGYAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWN++I+GY  N L  +A++ V+ MM++   ++    T+ +IL A + V  L +G+++H
Sbjct: 658  VSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLD--SFTFATILSACASVATLERGMEVH 715

Query: 472  ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            A  I+ CL  DV V + LVDMY KCGRID A   F  +P  +   WN++IS +  HG G+
Sbjct: 716  ACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGE 775

Query: 532  KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
            KAL  F +M+ +G  PDH+TFV +L+ACSH G V EG  +F  M E + + P ++H+ CM
Sbjct: 776  KALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCM 835

Query: 592  VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA-CRIHG-NMELGAVASDRLFEVDSE 649
            VDL GRAG L    +FI +MP++P+  IW  +LGA CR +G N ELG  A++ L E++ +
Sbjct: 836  VDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQ 895

Query: 650  NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
            N   YVL++N+YA+  KWE V + R+  ++  +KK  G S + + + V +F  G++ HP+
Sbjct: 896  NAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPE 955

Query: 710  YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
             + IYD+LR L  KM+  GY+P   + L D+E + KE +L+ HSE++A+AF +++     
Sbjct: 956  KDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSAL 1014

Query: 770  PIQIFKNLRVCGDCHNWTKFISQIT--EREIIVRDSNRFHHFKDGICSCGDY 819
            PI+I KNLRVCGDCH+   +IS+I     ++ ++ SN     +   C CGD+
Sbjct: 1015 PIRIMKNLRVCGDCHSAFGYISKIIFFFLKMAMKPSNNI-WIRRQQCPCGDW 1065



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 176/593 (29%), Positives = 287/593 (48%), Gaps = 27/593 (4%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           +Q        + LH   +  G +  +F S  L+N Y  +GDL  ++  FD +S RN+ TW
Sbjct: 81  YQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTW 140

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-----GKKIHCS 168
             +IS Y + G+  EA   F    + +G  P+ Y F   L+AC+         G +IH  
Sbjct: 141 ACLISGYTQNGKPDEACARFRDM-VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGL 199

Query: 169 VLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           + K  +  DV V   L+ MY      AN AR +FD + +R+S SWN++IS Y + G+AV 
Sbjct: 200 ISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVS 259

Query: 228 ALDILDEMRLEGV--SMDP--ITVASILPVCARSDN----ILSGLLIHLYIVKHGLEFNL 279
           A D+   M+ EG+  S  P   T  S++     S +    +L  +L    + K G   +L
Sbjct: 260 AYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLAR--VEKSGFLQDL 317

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ- 338
           +VS+ L++ +A+FG+   A  +F+QM  R+VVS N ++    +      A   F  M+  
Sbjct: 318 YVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL 377

Query: 339 AGIQPD----LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            GI  D    LL+  S  S++ +    R  R VH  ++R G     V IGN +V+MYAK 
Sbjct: 378 VGINSDSYVVLLSAFSEFSVLEEGR--RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 435

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  AC+VFE +  KD +SWN+LI+G  QN  + +A E F  M     + P+  T +S 
Sbjct: 436 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM-PSNFTLIST 494

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L + + +G +  G +IH   +K  L  DV V+  L+ +Y + G   + + +F  +P    
Sbjct: 495 LSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQ 554

Query: 515 VPWNAII-SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
           V WN++I +         +A+ +F QM+  G     +TF+++L+A S   L  E     H
Sbjct: 555 VSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIH 613

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            +  ++ +         ++  +G+ G +         M    D   W +++  
Sbjct: 614 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 666



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%)

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           T+ S++  Y       +  ++H + IK     ++F++  L+++Y + G +  A  LF ++
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
              + V W  +IS +  +G+ D+A   FR M+  G  P+H  F S L AC  SG
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 26/206 (12%)

Query: 50  FDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C  +  ++R   +HA  + +     V   + LV+ Y+  G + ++   F+ + 
Sbjct: 695 FATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 754

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RNVY+WNSMIS Y R G   +A+  F +  L  G  PD  TF  VL AC         H
Sbjct: 755 LRNVYSWNSMISGYARHGHGEKALKLFTRMML-DGQPPDHVTFVGVLSACS--------H 805

Query: 167 CSVLKLGFEW-----DVF-VAASLLHMYCRFGLANVARKL------FDDMPVRDSG-SWN 213
              ++ GFE      +V+ ++  + H  C   L   A KL       + MP++ +   W 
Sbjct: 806 VGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWR 865

Query: 214 AMISGYCQS-GNAVEALDILDEMRLE 238
            ++   C++ G   E      EM LE
Sbjct: 866 TVLGACCRANGRNTELGRRAAEMLLE 891


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/681 (36%), Positives = 381/681 (55%), Gaps = 57/681 (8%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFD--DMPVR 207
           L+ C+ L   K++HC + K G +        L++           + ARK F+     VR
Sbjct: 32  LRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVR 91

Query: 208 DSGSW---NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
              +    N++I GY  +G   EA+ +   M + GV+ +  T   +L  C +      G+
Sbjct: 92  SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGI 151

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H  +VK GLE ++F+ N LI+ YA+ G M H  +VF+ M ER+VVSW S+I  Y + +
Sbjct: 152 QVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
            P  A   F  M                     LN                      ++ 
Sbjct: 212 RPKEAVSLFFEM---------------------LNK---------------------VMV 229

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           NA+VDMY K G I++A  +F+    ++++ +NT+++ YA+ GLA EA+ +   M +    
Sbjct: 230 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ-QGP 288

Query: 445 NPNQGTYVSILPAYSHV-----GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
            P++ T +S + A + +     G +  G  +H  + KN +  D+ + T LVDM+ +CG  
Sbjct: 289 RPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDP 348

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             AM +F ++       W A I    + G G+ A   F QML +GV+PD + FV +LTAC
Sbjct: 349 QSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTAC 408

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SH G V +G   F +M E+ GI P ++HYGCMVDL GRAG L  A + I++MP+ P+  +
Sbjct: 409 SHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVV 467

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WG+LL ACR+H N+E+   A++R+ E+  +  G +VL+SNIYA+ GKW  V  VR   R+
Sbjct: 468 WGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLRE 527

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           +G++K PG SS++VN  +  F +G+ +HP+   I   L+ +  +    G++PD S VL D
Sbjct: 528 KGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLD 587

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           V+E EKE++L+ HSE+LAIAFG+I++    PI++ KNLR+C DCH++ K  S I  REII
Sbjct: 588 VDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREII 647

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD+NRFH F+ G+CSC DYW
Sbjct: 648 VRDNNRFHFFRQGLCSCCDYW 668



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 225/494 (45%), Gaps = 59/494 (11%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTF---- 102
            ++  + C  L+ +K+LH  +  +G  +   + TKLVN  A +     L ++R  F    
Sbjct: 28  LNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFK 87

Query: 103 -DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV- 160
            D  S   ++  NS+I  Y   G   EA+   Y   L  G+ P+ YTFP VL  C  +  
Sbjct: 88  EDVRSDDALFMLNSLIRGYSSAGLGREAI-LLYVRMLVLGVTPNHYTFPFVLSGCTKIAA 146

Query: 161 --DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
             +G ++H SV+K+G E DVF+   L+H Y   G  +   K+F+ M  R+  SW ++I G
Sbjct: 147 FCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICG 206

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y +     EA+ +  EM                                          N
Sbjct: 207 YARGDRPKEAVSLFFEM-----------------------------------------LN 225

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
             + N L++MY K G +  A R+FD+ ++R++V +N+I++ Y +      A      M Q
Sbjct: 226 KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ 285

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF----IMRRGWFMEDVIIGNAVVDMYAKL 394
            G +PD +T++S  S  AQL D    +  HG+     + +     D+ +  A+VDM+A+ 
Sbjct: 286 QGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARC 345

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G   SA  VF  +  +DV +W   I   A  G    A  +F  M     + P+   +V +
Sbjct: 346 GDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQM-LIQGVKPDVVLFVQV 404

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSS 513
           L A SH G + QG+ I + +  + +   +    C+VD+ G+ G + +A  L   +P   +
Sbjct: 405 LTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPN 464

Query: 514 SVPWNAIISCHGIH 527
            V W ++++   +H
Sbjct: 465 DVVWGSLLAACRVH 478


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/586 (40%), Positives = 340/586 (58%), Gaps = 33/586 (5%)

Query: 267 HLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           H  I++ GL  +      +I   A  K G + +AL VFD++   D   +N+I   Y +  
Sbjct: 40  HSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQ 99

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                   ++ M    + P+  T   L             + +H  +++ G F  D    
Sbjct: 100 LARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFG-FGADGFSL 158

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N ++ MY     +  A  VF+ +P +DV+SW +LITGY+Q G   +A EVF++M E N +
Sbjct: 159 NNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSV 218

Query: 445 NPNQ--GTYV----------------------------SILPAYSHVGALRQGIKIHARV 474
           + N     YV                            S+L A + +GAL QG  IH  +
Sbjct: 219 SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI 278

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            K+ +  D  +AT ++DMY KCG ++ A  +F ++P+     WN +I    +HG+G+ A+
Sbjct: 279 EKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAI 338

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
             F++M  E V PD ITFV++L+AC+HSGLV EG+ YF  M E  G+KP ++H+GCMVDL
Sbjct: 339 ELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDL 398

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
            GRAG L  A   I  MPV PDA + GAL+GACRIHGN ELG     ++ E++  N G Y
Sbjct: 399 LGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRY 458

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           VL++N+YA+ G+WE V +VR L  DRG+KK PG+S IE  + VD F  G R HP+ ++IY
Sbjct: 459 VLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIY 518

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
            +L  +   ++S+GYVPD   VL D++E+EKE+ L  HSE+LAIAFG++ + P   ++I 
Sbjct: 519 AKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRIS 578

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLR+C DCH  +K IS++ +REII+RD NRFHHF+ G CSC DYW
Sbjct: 579 KNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 230/526 (43%), Gaps = 64/526 (12%)

Query: 17  LPLLQAHRP-LFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGK 75
           L LLQA  P L SA A+ L +                   SC+ +  +K+ H+ ++  G 
Sbjct: 4   LQLLQASPPSLSSAKAHKLPLYG---------------LDSCSTMAELKQYHSQIIRLGL 48

Query: 76  IKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF 133
                +  +++ F A    GDL+++   FD I + + Y +N++   Y+R      A +C 
Sbjct: 49  SADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLR---WQLARNCI 105

Query: 134 YQFT--LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMY 188
           + ++  L   + P+ +T+PP+++AC     + +GK+IH  VLK GF  D F   +L+HMY
Sbjct: 106 FMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMY 165

Query: 189 CRFGLANVARKLFDDMPVRD-------------------------------SGSWNAMIS 217
             F     AR++FD+MP RD                               S SWNAMI+
Sbjct: 166 VNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIA 225

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y QS    EA  + D MRLE V +D    AS+L  C     +  G  IH YI K G+E 
Sbjct: 226 AYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIEL 285

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  ++  +I+MY K G +  A  VF+++ ++ + SWN +I           A   F  M+
Sbjct: 286 DSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEME 345

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           +  + PD +T V++ S  A        +    ++         +     +VD+  + G++
Sbjct: 346 REMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLL 405

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILP 456
             A  +   +PV         + G  +    +E  E  Q+ ++  E+ P N G YV +  
Sbjct: 406 EEARKLINEMPVNPDAGVLGALVGACRIHGNTELGE--QIGKKVIELEPHNSGRYVLLAN 463

Query: 457 AYSHVGALRQGIKIHA----RVIKNCLCFDVFVATCLVDMYGKCGR 498
            Y+  G      K+      R +K    F +  +   VD +   GR
Sbjct: 464 LYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGR 509



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 195/427 (45%), Gaps = 41/427 (9%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC---RFGLANVARKLFDDMPVRDS 209
           L +C  + + K+ H  +++LG   D      ++  +C   + G  N A ++FD +P  D+
Sbjct: 27  LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIK-FCAISKSGDLNYALEVFDKIPHPDA 85

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             +N +  GY +   A   + +   M  + VS +  T   ++  C     I  G  IH +
Sbjct: 86  YIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAH 145

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS----------------- 312
           ++K G   + F  NNLI+MY  F  +  A RVFD M +RDVVS                 
Sbjct: 146 VLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKA 205

Query: 313 --------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
                         WN++IAAY QSN    A   F  M+   +  D     S+ S    L
Sbjct: 206 REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 265

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 + +HG+I + G  + D  +   V+DMY K G +  A  VF  LP K + SWN +
Sbjct: 266 GALEQGKWIHGYIEKSGIEL-DSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCM 324

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G A +G    AIE+F+ ME    + P+  T+V++L A +H G + +G K + + +   
Sbjct: 325 IGGLAMHGKGEAAIELFKEMER-EMVAPDGITFVNVLSACAHSGLVEEG-KHYFQYMTEV 382

Query: 479 LCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALN 535
           L     +    C+VD+ G+ G +++A  L  ++P +       A++    IHG  +    
Sbjct: 383 LGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQ 442

Query: 536 FFRQMLD 542
             +++++
Sbjct: 443 IGKKVIE 449


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/705 (36%), Positives = 386/705 (54%), Gaps = 17/705 (2%)

Query: 15  KLLPLLQAHRPLFSAAANSLQISPD------CLENESREIDFDDLFQSCTKLHHVKRLHA 68
           K + LL  H    +    +LQ +P+       +++ S    F  L   C  +  ++++HA
Sbjct: 2   KRISLLHRHLQWRNLTVTALQRTPEIDRTIASIQSISSNPCFS-LLGICKTVSSLRKIHA 60

Query: 69  LLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
           LLVV G  + +   TKLV+ Y + G +  +R  FD I   ++Y+W  MI  Y      SE
Sbjct: 61  LLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSE 120

Query: 129 AVDCFYQFTLTSGLRP-DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASL 184
            V  FY   L   L   D   F  VLKAC   R   +G+K+HC ++K+G   D FV   L
Sbjct: 121 IVQ-FYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSP-DSFVLTGL 178

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           + MY +      +R++FD++  R+   W +MI GY Q+    E L + + MR   V  + 
Sbjct: 179 VDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQ 238

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
            T+ S++  C +   +  G  +H Y++K G + N F+   L+++Y K G +R A  VFD+
Sbjct: 239 YTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDE 298

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           +   D+VSW ++I  Y Q   P  A   FT  +   + P+ +T  S+ S  AQ       
Sbjct: 299 LSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMG 358

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
           RSVH   ++ G   ED    NA+VDMYAK  +I  A  VFE +  KDVI+WN++I+GY Q
Sbjct: 359 RSVHCLGIKLG--SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQ 416

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDV 483
           NG A EA+E+F  M   + + P+  T VS+L A + VGA R G  +H   IK   L   V
Sbjct: 417 NGYAYEALELFDQMRS-DSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSV 475

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           +V T L++ Y KCG  + A  +F ++   +++ W+A+I  +GI G   ++L  F  ML E
Sbjct: 476 YVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKE 535

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
            + P+ + F ++L+ACSHSG++ EG RYF+ M + +   P +KHY CMVDL  RAG L  
Sbjct: 536 KLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEE 595

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           A +FI+ +P++PD S+ GA L  CR+H   +LG VA  R+ E+  +   YYVLMSN+YA+
Sbjct: 596 ALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYAS 655

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
            G+W   ++V  L + RGL K PGWS +++    D       +HP
Sbjct: 656 EGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDFSPLIVASHP 700


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/626 (37%), Positives = 367/626 (58%), Gaps = 18/626 (2%)

Query: 205 PVRDSGSWNA--MISGYCQSGNAVEALDILDEMRLEGVSMDPI--TVASILPVCARSDNI 260
           P +D  S N   +I   C+ GN  +A+ +L          +P   T   ++  C   +++
Sbjct: 37  PTKDIKSNNNDDLIQSLCRGGNLKQAVQLL------CCEPNPTKKTFELLINSCIEQNSL 90

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G+ +H  +V  GL+ + +++  LINMY   G + HA +VFD+  E+ +  WN+I  A 
Sbjct: 91  SDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRAL 150

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSL--TSIVAQLNDC--RNSRSVHGFIMRRGW 376
             ++        +  M   GI  +  T   +    +V++L+ C  R  + +H  I+R G 
Sbjct: 151 AMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHG- 209

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           +   V +   ++D+YA+ G ++ A +VF  +P K+++SW+ +I  YA+N +  +A+E+FQ
Sbjct: 210 YEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQ 269

Query: 437 --MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
             M+E C+ + PN  T VS+L A + + AL  G  +HA V++  L   + V   L+ MYG
Sbjct: 270 IMMLEACDTV-PNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYG 328

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           +CG I     +F  + +   + WN++IS +G+HG G KA+  F  M++ GV P +ITF++
Sbjct: 329 RCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFIT 388

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
           +L ACSH+GLV E +  F  M  ++ I P ++HY CMVD+ GRA  L  A   IQNM  +
Sbjct: 389 VLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFK 448

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
           P  ++WG+LLG+CRIH N+EL   AS  LFE++ +N G YVL+S+IYA    W  V  VR
Sbjct: 449 PGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVR 508

Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
                RGL+K P  S IEV  K+    +    +P+ E++   L  L  ++K+ GYVP  +
Sbjct: 509 KQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTN 568

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
            V  D++E+EKE I+  HS +LA+AFG+I++     I+I  NLR+C DCH + KF+S+ T
Sbjct: 569 VVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFT 628

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
            REI++RD NRFH FKDG+CSCGDYW
Sbjct: 629 NREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 166/324 (51%), Gaps = 13/324 (4%)

Query: 40  CLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C E    +  F+ L  SC + + +     +H  LV SG  +  + +TKL+N Y +LG + 
Sbjct: 67  CCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVD 126

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +   FD    + ++ WN++        R  + +  + Q     G+  + +T+  VLKAC
Sbjct: 127 HACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWI-GIPSNRFTYTYVLKAC 185

Query: 157 R-------NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
                    L  GK+IH  +L+ G+E  V V  +LL +Y RFG  + A  +F  MP ++ 
Sbjct: 186 VVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNI 245

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSM--DPITVASILPVCARSDNILSGLLIH 267
            SW+AMI+ Y ++   ++AL++   M LE      +PIT+ S+L  CA    +  G L+H
Sbjct: 246 VSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVH 305

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
            Y+++ GL+  L V N LI MY + G +    RVFD M +RDV+SWNS+I+ Y       
Sbjct: 306 AYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGK 365

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSL 351
            A   F  M   G+ P  +T +++
Sbjct: 366 KAIQIFENMINRGVSPSYITFITV 389



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   K +HA ++  G    V   T L++ YA  G +S++   F  +  +N+ +W++
Sbjct: 191 SICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSA 250

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRNLV---DGKKIHCSVLK 171
           MI+ Y +     +A++ F    L +    P+  T   VL+AC +L     GK +H  VL+
Sbjct: 251 MIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLR 310

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
            G +  + V  +L+ MY R G  +  +++FD M  RD  SWN++IS Y   G   +A+ I
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQI 370

Query: 232 LDEMRLEGVSMDPITVASILPVCARS 257
            + M   GVS   IT  ++L  C+ +
Sbjct: 371 FENMINRGVSPSYITFITVLCACSHA 396


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/640 (37%), Positives = 361/640 (56%), Gaps = 38/640 (5%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           +  +I  +CQ     EA+D L  +        P   ++++  C R   +  G  +H +  
Sbjct: 35  FEEIIELFCQQNRLKEAVDYLHRI----PQPSPRLYSTLIAACLRHRKLELGKRVHAHTK 90

Query: 272 KHGLEFNLFVSNNLINMYAK-------------------------------FGMMRHALR 300
                  + +SN LI+MYAK                                G +  A +
Sbjct: 91  ASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARK 150

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLN 359
           +FD+M  RD  SWN++I+ Y      + A   F  MQ+      ++ TL S  +  A ++
Sbjct: 151 LFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAIS 210

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
             R  + +HG+++R G  +++V+   A++D+Y K G +N A  +F+ +  KD++SW T+I
Sbjct: 211 SLRRGKEIHGYLIRSGLELDEVVW-TALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI 269

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
               ++G   E   +F+ +     + PN+ T+  +L A + + A + G ++H  + +   
Sbjct: 270 HRCFEDGRKKEGFSLFRDLMGSG-VRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGY 328

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
               F A+ LV +Y KCG  + A  +F Q+PR   V W ++I  +  +GQ D AL FF  
Sbjct: 329 DPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFES 388

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           +L  G +PD ITFV +L+AC+H+GLV  G  YFH ++E+ G+     HY C++DL  R+G
Sbjct: 389 LLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSG 448

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
               A N I NMP++PD  +W +LLG CRIHGN+EL   A+  LFE++ EN   Y+ +SN
Sbjct: 449 RFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSN 508

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           IYAN G W    +VR+   +RG+ K PG S IE+  +V +F  G+ +HPK   I++ L  
Sbjct: 509 IYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGE 568

Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
           L+ KMK  GYV D +FVL DVEE++KE  +  HSE+LA+AFGIIS+ P +PI++FKNLR 
Sbjct: 569 LSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRT 628

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           C DCHN  K+IS+I +R+IIVRDSNRFH F DG CSC DY
Sbjct: 629 CVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 252/529 (47%), Gaps = 52/529 (9%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +  FSS+    F+ NL +L+    T  H S    +    +I ++ +  RL EAVD  ++ 
Sbjct: 4   RRAFSSSS--QFHKNL-NLNPKDTTLSHHSEHRRF--EEIIELFCQQNRLKEAVDYLHRI 58

Query: 137 TLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
              S   P  Y+   ++ AC   R L  GK++H       F   + ++  L+HMY + G 
Sbjct: 59  PQPS---PRLYS--TLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGS 113

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR---------------LE 238
              A+ LFD++P +D  SWN MISGY   G   +A  + DEM                 +
Sbjct: 114 LVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQ 173

Query: 239 GVSMDPITVASILPVCARSD-NILS----------------GLLIHLYIVKHGLEFNLFV 281
           G  M+ + +  ++     S+ N+ +                G  IH Y+++ GLE +  V
Sbjct: 174 GWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVV 233

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
              L+++Y K G +  A  +FDQM ++D+VSW ++I    +          F  +  +G+
Sbjct: 234 WTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGV 293

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P+  T   + +  A L   +  + VHG++ R G +       +A+V +Y+K G   +A 
Sbjct: 294 RPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVG-YDPFSFAASALVHVYSKCGNTETAR 352

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF  +P  D++SW +LI GYAQNG    A++ F+ +       P++ T+V +L A +H 
Sbjct: 353 RVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSG-TKPDEITFVGVLSACTHA 411

Query: 462 GALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNA 519
           G +  G++  H+   K+ L        C++D+  + GR  +A ++   +P +     W +
Sbjct: 412 GLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWAS 471

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDH-ITFVSLLTACSHSGLVSE 567
           ++    IHG  + A    + + +  + P++  T+++L    +++GL +E
Sbjct: 472 LLGGCRIHGNIELAERAAKALFE--LEPENPATYITLSNIYANAGLWTE 518



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 190/405 (46%), Gaps = 20/405 (4%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K + S   +++ YAN+G +  +R  FD + +R+ ++WN++IS YV  G   EA+D F   
Sbjct: 127 KDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMM 186

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
                   + +T    L A   +     GK+IH  +++ G E D  V  +LL +Y + G 
Sbjct: 187 QENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGS 246

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            N AR +FD M  +D  SW  MI    + G   E   +  ++   GV  +  T A +L  
Sbjct: 247 LNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNA 306

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           CA       G  +H Y+ + G +   F ++ L+++Y+K G    A RVF+QM   D+VSW
Sbjct: 307 CADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSW 366

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ-------LNDCRNSRS 366
            S+I  Y Q+  P  A  FF ++ ++G +PD +T V + S           L    + + 
Sbjct: 367 TSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKE 426

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQN 425
            HG +     +         V+D+ A+ G    A  + + +P+K D   W +L+ G   +
Sbjct: 427 KHGLVHTADHYA-------CVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIH 479

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           G    A    + + E    NP   TY+++   Y++ G   +  K+
Sbjct: 480 GNIELAERAAKALFELEPENP--ATYITLSNIYANAGLWTEETKV 522


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 250/719 (34%), Positives = 411/719 (57%), Gaps = 12/719 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C KL  ++    LH +LV  G   T F    LV+ YA    LS ++  FD   
Sbjct: 165 FPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQ 224

Query: 107 YR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
            + +   WNS++S Y   G+  E +  F +  +T G   + YT    L AC        G
Sbjct: 225 EKGDAVLWNSILSSYSTSGKSLETLQLFREMQMT-GPASNSYTIVSALTACEGFSYAKLG 283

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K+IH +VLK    ++V+V  +L+ MY R G    A ++   M   D  +WN++I GY Q+
Sbjct: 284 KEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQN 343

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               EAL    +M   G   D +++ S++    R  N+L+G+ +H Y++KHG + NL V 
Sbjct: 344 LMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVG 403

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N LI+MY+K  +  +  R F  M E+D++SW +IIA Y  ++  + A   F  + +  ++
Sbjct: 404 NTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRME 463

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            D + L S+    + L      + +H  I+R+G    D +I N +VD+Y K   +  A  
Sbjct: 464 IDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLI--DTVIQNELVDVYGKCRNMGYASR 521

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VFE +  KDV+SW ++I+  A NG  +EA+E+F+ M E   +  +    + IL A + + 
Sbjct: 522 VFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLL-ADSVALLCILSAAASLS 580

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL++G +IH  +++   C +  +A  +VDMY  CG +  A ++F ++ R   + + ++I+
Sbjct: 581 ALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 640

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G+HG G  ++  F +M  E V PDHI+F++LL ACSH+GL+ EG+R+  +M+ E+ ++
Sbjct: 641 AYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLE 700

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+VD+ GRA  +  A  F++ M   P   +W ALL ACR H   E+G +A+ R
Sbjct: 701 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQR 760

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E++ +N G  VL+SN++A  G+W  V++VR+  +  G++K PG S IE++ KV  F  
Sbjct: 761 LLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTA 820

Query: 703 GNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
            +++HP+ ++IY++L  +T K+ +  GY+ D  F+L +V+E EK  +L  HSERLAIA+
Sbjct: 821 RDKSHPETKEIYEKLSEVTRKLERESGYLADTKFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 281/535 (52%), Gaps = 12/535 (2%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RN 158
           FD +  R  + WN++I  YV  G  + A+   Y+     G+  D Y+FP +LKAC   R+
Sbjct: 119 FDEMRDRTAFAWNALIGAYVSNGEPASAL-FIYRNMRVEGVPLDLYSFPVLLKACGKLRD 177

Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMIS 217
           +  G ++HC ++KLGF    F+  +L+ MY +    + A++LFD    + D+  WN+++S
Sbjct: 178 IRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILS 237

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Y  SG ++E L +  EM++ G + +  T+ S L  C        G  IH  ++K    F
Sbjct: 238 SYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSF 297

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
            ++V N LI MYA+ G M  A R+   M   DVV+WNS+I  Y Q+     A  FF  M 
Sbjct: 298 EVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMI 357

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            AG +PD ++L S+ +   +L++      +H ++++ GW   ++++GN ++DMY+K  + 
Sbjct: 358 AAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGW-DSNLLVGNTLIDMYSKCNLT 416

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                 F  +  KD+ISW T+I GYA N    EA+++F+ + +   +  ++    SIL A
Sbjct: 417 CYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAK-KRMEIDEMMLGSILRA 475

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S + ++    +IH  +++  L  D  +   LVD+YGKC  +  A  +F  +     V W
Sbjct: 476 CSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSW 534

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQ 576
            ++IS   ++G  ++A+  FR+M + G+  D +  + +L+A +    + +G+  + ++++
Sbjct: 535 TSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLR 594

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           + F ++  +     +VD++   G L  A      +  R     + +++ A  +HG
Sbjct: 595 KGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG 646



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 223/438 (50%), Gaps = 10/438 (2%)

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            K+FD+M  R + +WNA+I  Y  +G    AL I   MR+EGV +D  +   +L  C + 
Sbjct: 116 EKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKL 175

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSI 316
            +I SG  +H  +VK G     F+ N L++MYAK   +  A R+FD   E+ D V WNSI
Sbjct: 176 RDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSI 235

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           +++Y  S   +     F  MQ  G   +  T+VS  +     +  +  + +H  +++   
Sbjct: 236 LSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTH 295

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
             E V + NA++ MYA+ G +  A  +   +   DV++WN+LI GY QN +  EA++ F 
Sbjct: 296 SFE-VYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFC 354

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M       P++ +  S++ A   +  L  G+++HA VIK+    ++ V   L+DMY KC
Sbjct: 355 DMIAAGH-KPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKC 413

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
                    F  +     + W  II+ + ++    +AL  FR +  + +  D +   S+L
Sbjct: 414 NLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSIL 473

Query: 557 TACS--HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
            ACS   S L+ + + + H++++   I   +++   +VD++G+  ++G A    +++  +
Sbjct: 474 RACSVLKSMLIVK-EIHCHILRKGL-IDTVIQNE--LVDVYGKCRNMGYASRVFESIKGK 529

Query: 615 PDASIWGALLGACRIHGN 632
            D   W +++ +  ++GN
Sbjct: 530 -DVVSWTSMISSSALNGN 546


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/531 (40%), Positives = 341/531 (64%), Gaps = 6/531 (1%)

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G M +A ++FD+M +     WN+I+  Y ++  P  A   +  M+  G++PD  T   + 
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKD 411
              A+L +      +HG +++ G  +E V  +   ++ MY K G +  A  +F  +  +D
Sbjct: 143 KACAELAELWAGLGMHGHVVKHG--LEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERD 200

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +++WN LI    Q G +S+A++ F+ M     I P+  T VS L A  H+G L  G +I+
Sbjct: 201 LVAWNALIAVCVQTGFSSKALQSFREMGMAG-IKPDSVTIVSALSACGHLGCLETGEEIY 259

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
               +  +  ++ V    +DM  KCG +D AM+LF ++P+ + + W+ +I  + ++G+ +
Sbjct: 260 EFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESE 319

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE--EFGIKPHLKHYG 589
           KAL  F +M ++GV+P+++TF+++L+ACSH+G V+EG +YF+ M +  +  I+P  +HY 
Sbjct: 320 KALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYA 379

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
           CMVDL GR+GHL  A+NFI+ MP+  D  IWGALLGAC IH N++LG   +D LFE+  E
Sbjct: 380 CMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPE 439

Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
              Y+VL+SN+YA  G+W  V++VR   + +G +K   +SS+E N ++ I Y G+++HP+
Sbjct: 440 IASYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQ 499

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
              I  +L +L  +MKS+GY+P+   V  DVE++EKE  L++HSE+LAIAF +I+  PK 
Sbjct: 500 SASILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKF 559

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           PI++ KNLR+CGDCH + K +S+IT REII+RD NRFHHFK+GICSC D+W
Sbjct: 560 PIRVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 184/341 (53%), Gaps = 8/341 (2%)

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G  + AR+LFD+M       WN ++ GY ++G   +A+ +  +MR  GV  DP T   ++
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             CA    + +GL +H ++VKHGLEF   V   L+ MY KFG +  A  +F  M+ERD+V
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           +WN++IA   Q+     A   F  M  AGI+PD +T+VS  S    L        ++ F 
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFA 262

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
              G    ++I+ NA +DM AK G ++ A  +F+ +P ++VISW+T+I GYA NG + +A
Sbjct: 263 REEG-IDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKA 321

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI----KNCLCFDVFVAT 487
           + +F  M+    + PN  T++++L A SH G + +G +    +     KN        A 
Sbjct: 322 LALFSRMKN-QGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYA- 379

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           C+VD+ G+ G +++A +    +P  +    W A++    IH
Sbjct: 380 CMVDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIH 420



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 148/264 (56%), Gaps = 4/264 (1%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GD+S++R  FD +     + WN+++  YV+ G   +AV  + +     G+RPD +TFP V
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHL-GVRPDPFTFPFV 141

Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           +KAC  L +   G  +H  V+K G E+   V   L+ MY +FG    A  LF  M  RD 
Sbjct: 142 IKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDL 201

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            +WNA+I+   Q+G + +AL    EM + G+  D +T+ S L  C     + +G  I+ +
Sbjct: 202 VAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEF 261

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
             + G++ N+ V N  ++M AK G M  A+ +FD+M +R+V+SW+++I  Y  + +   A
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKA 321

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTS 353
              F+ M+  G+QP+ +T +++ S
Sbjct: 322 LALFSRMKNQGVQPNYVTFLAVLS 345



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 4/201 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H  +V  G        T+L+  Y   G+L  +   F  +  R++  WN++I+V V+ G 
Sbjct: 157 MHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGF 216

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAA 182
            S+A+  F +  + +G++PD  T    L AC +L     G++I+    + G + ++ V  
Sbjct: 217 SSKALQSFREMGM-AGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNIIVHN 275

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           + L M  + G  + A  LFD+MP R+  SW+ +I GY  +G + +AL +   M+ +GV  
Sbjct: 276 ARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQP 335

Query: 243 DPITVASILPVCARSDNILSG 263
           + +T  ++L  C+ +  +  G
Sbjct: 336 NYVTFLAVLSACSHTGRVNEG 356


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/697 (35%), Positives = 390/697 (55%), Gaps = 30/697 (4%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           + P+L  C     L   + +H  ++K G   D+FVA SL+++Y R   +  AR+LFD MP
Sbjct: 79  YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            ++  +W A+I+G+  +     AL++  EM   G      T+  +L  C+ +  I  G  
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQ 198

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA-YEQSN 324
           +H Y +K+G +    + N+L  +Y K G +   LR F    +++V++W ++I++  E  N
Sbjct: 199 VHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDEN 258

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
                   F  M + G+ P+  TL S+ S+     D    + V  F  + G    ++ + 
Sbjct: 259 YLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGC-EANLPVK 317

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-----------NGLASEAIE 433
           N+ + +Y + G  + A  +FE +    +I+WN +I+GYAQ                +A++
Sbjct: 318 NSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALK 377

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           +F+ +   +E+ P+  T+ SIL   S + AL QG +IHA  IK     DV V + LV+MY
Sbjct: 378 LFRDLVR-SELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMY 436

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG I+ A   F ++P  + V W ++IS +  HG+   A+  F  M+  G RP+ ITFV
Sbjct: 437 NKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFV 496

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           SLL+ACS++GLV E +RYF MM+ E+ I+P + HYGCMVD+F R G L  A +FI+    
Sbjct: 497 SLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGF 556

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P+ +IW +L+  CR HGNMEL   A+DRL E+  + +  YVL+ N+Y + G+W  V  V
Sbjct: 557 EPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARV 616

Query: 674 RSLAR--DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           R LA+  D G+ +   W  I + +KV  F   + THP+  ++Y  L NL  K K++GY P
Sbjct: 617 RKLAKHEDVGVLRDRSW--IAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEP 674

Query: 732 --DKSFVLQDVEEDEKEH-------ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
             +   +L D +E + +        ++  HSERLA+A G++ +PP + +++ KN+ +C D
Sbjct: 675 YQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRD 734

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           CH+  K+ S +  REI+VRDS R H FKDG CSCGD+
Sbjct: 735 CHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 262/519 (50%), Gaps = 31/519 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   + LH  +V +G    +F +T LVN Y        +R  FD +  +NV TW ++I+ 
Sbjct: 92  LGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITG 151

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
           +      + A++ F +  L  G  P  YT   +L AC   R +  G+++H   +K G + 
Sbjct: 152 HTLNSEPALALEVFVEM-LELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADT 210

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE-ALDILDEM 235
              +  SL  +YC+ G      + F   P ++  +W  MIS   +  N ++  L +  +M
Sbjct: 211 ITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDM 270

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
              GV  +  T+ S++ +C    ++  G  +  +  K G E NL V N+ + +Y + G  
Sbjct: 271 LEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGET 330

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT------AHGF-----FTTMQQAGIQPD 344
             A+R+F++M    +++WN++I+ Y Q  D         + GF     F  + ++ ++PD
Sbjct: 331 DEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPD 390

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           L T  S+ S+ + +        +H   ++ G  + DV++ +A+V+MY K G I  A   F
Sbjct: 391 LFTFSSILSVCSAMMALEQGEQIHANTIKTGC-LSDVVVNSALVNMYNKCGSIECATKAF 449

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +P +  ++W ++I+GY+Q+G + +AI++F+ M   +   PN+ T+VS+L A S+ G +
Sbjct: 450 VEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDM-VLSGARPNEITFVSLLSACSYAGLV 508

Query: 465 RQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP----WN 518
            +  + +  +++N    +  V    C+VDM+ + GR+DDA S    + R+   P    W+
Sbjct: 509 EEAER-YFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSF---IKRTGFEPNEAIWS 564

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLL 556
           ++++    HG  + A     ++L+  ++P  I T+V LL
Sbjct: 565 SLVAGCRSHGNMELAFYAADRLLE--LKPKVIETYVLLL 601



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 210/447 (46%), Gaps = 22/447 (4%)

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL--EGVSMDPITVASILPVCARSD 258
           FD        S  A+ +G  +  +    LD  + M +  +G ++       +L  C  + 
Sbjct: 31  FDKGTSYQRSSAQALENGRLEHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAG 90

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            + +   +H ++VK G   ++FV+ +L+N+Y +    R A R+FD M +++VV+W ++I 
Sbjct: 91  GLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALIT 150

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            +  +++P  A   F  M + G  P   TL  + S  +        + VHG+ ++ G   
Sbjct: 151 GHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYG--- 207

Query: 379 EDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN-GLASEAIEVF 435
            D I  +GN++  +Y K G + S    F+G P K+VI+W T+I+  A++       + +F
Sbjct: 208 ADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLF 267

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
             M E   + PN+ T  S++        +  G ++ A   K     ++ V    + +Y +
Sbjct: 268 LDMLE-GGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLR 326

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHG---------IHG--QGDKALNFFRQMLDEG 544
            G  D+AM LF ++  SS + WNA+IS +          +H   +G +AL  FR ++   
Sbjct: 327 KGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSE 386

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           ++PD  TF S+L+ CS    + +G++  H    + G    +     +V+++ + G +  A
Sbjct: 387 LKPDLFTFSSILSVCSAMMALEQGEQ-IHANTIKTGCLSDVVVNSALVNMYNKCGSIECA 445

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHG 631
                 MP R   + W +++     HG
Sbjct: 446 TKAFVEMPTRTPVT-WTSMISGYSQHG 471



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 20/202 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   C+    L   +++HA  + +G +  V  ++ LVN Y   G +  +   F  + 
Sbjct: 394 FSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMP 453

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKK 164
            R   TW SMIS Y + GR  +A+  F    L SG RP+  TF  +L AC    LV+  +
Sbjct: 454 TRTPVTWTSMISGYSQHGRSQDAIQLFEDMVL-SGARPNEITFVSLLSACSYAGLVEEAE 512

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFG-----LANVARKLFDDMPVRDSGSWNAMIS 217
            +  +++  +  +  V     ++ M+ R G      + + R  F+     +   W+++++
Sbjct: 513 RYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEP----NEAIWSSLVA 568

Query: 218 GYCQSGN---AVEALDILDEMR 236
           G    GN   A  A D L E++
Sbjct: 569 GCRSHGNMELAFYAADRLLELK 590


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/573 (39%), Positives = 347/573 (60%), Gaps = 3/573 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A+ L  C + D    G  +H  I+K G   +LF  N L+NMY K   +  A ++FD+M E
Sbjct: 42  ANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE 101

Query: 308 RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
           R+ +S+ ++I  Y +S   + A   F  + +  + P+  T  S+    A +        +
Sbjct: 102 RNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQI 160

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H  +++ G    DV + NA++D+YAK G + ++  +F   P ++ ++WNT+I G+ Q G 
Sbjct: 161 HCHVIKIG-LHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGD 219

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT 487
             +A+ +F  M E   +   + TY S L A + + AL  G++IH+  +K     D+ V  
Sbjct: 220 GEKALRLFLNMLE-YRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN 278

Query: 488 CLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRP 547
            L+DMY KCG I DA  +F  + +   V WNA+IS + +HG G +AL  F +M +  V+P
Sbjct: 279 ALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKP 338

Query: 548 DHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
           D +TFV +L+AC+++GL+ +GQ YF  M ++ GI+P ++HY CMV L GR GHL  A   
Sbjct: 339 DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL 398

Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
           I  +P +P   +W ALLGAC IH ++ELG +++ R+ E++ ++   +VL+SN+YA   +W
Sbjct: 399 IDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRW 458

Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
           + V  VR   + +G+KK PG S IE    V  F  G+ +HP+   I   L  L  K K  
Sbjct: 459 DNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKA 518

Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
           GY+P+ + VL DVE++EKE +L  HSERLA++FGII +P  SPI+I KNLR+C DCH   
Sbjct: 519 GYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAI 578

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K IS++ +REI+VRD NRFHHF++G+CSCGDYW
Sbjct: 579 KCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 206/370 (55%), Gaps = 9/370 (2%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK +HC +LK G   D+F    LL+MY +      A KLFD+MP R++ S+  +I GY +
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           S   +EA+++   +  E V  +  T AS+L  CA  + +  G  IH +++K GL  ++FV
Sbjct: 117 SVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           SN L+++YAK G M +++ +F +   R+ V+WN++I  + Q  D   A   F  M +  +
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           Q   +T  S     A L        +H   ++   F +D+++ NA++DMYAK G I  A 
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTT-FDKDIVVTNALIDMYAKCGSIKDAR 294

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VF+ +  +D +SWN +I+GY+ +GL  EA+ +F  M+E  E+ P++ T+V +L A ++ 
Sbjct: 295 LVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE-TEVKPDKLTFVGVLSACANA 353

Query: 462 GALRQGIKIHARVIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV-PW 517
           G L QG      +I++     C + +  TC+V + G+ G +D A+ L  ++P   SV  W
Sbjct: 354 GLLDQGQAYFTSMIQDHGIEPCIEHY--TCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVW 411

Query: 518 NAIISCHGIH 527
            A++    IH
Sbjct: 412 RALLGACVIH 421



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 175/356 (49%), Gaps = 18/356 (5%)

Query: 13  LCKLLPLLQAHRPLFSAAANSL------QISPDCLENESREIDFDDLFQSCTKLHHVKR- 65
           +C+   L+Q  R  FS  +  L       +SP    + +    + +  Q C +     R 
Sbjct: 2   VCRNNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHA----YANALQDCIQKDEPSRG 57

Query: 66  --LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
             LH  ++  G    +F+   L+N Y     L  +   FD +  RN  ++ ++I  Y   
Sbjct: 58  KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
            R  EA++ F +  L   + P+ +TF  VL+AC  +     G +IHC V+K+G   DVFV
Sbjct: 118 VRFLEAIELFVR--LHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
           + +L+ +Y + G    + +LF + P R+  +WN +I G+ Q G+  +AL +   M    V
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
               +T +S L  CA    +  GL IH   VK   + ++ V+N LI+MYAK G ++ A  
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
           VFD M ++D VSWN++I+ Y        A   F  MQ+  ++PD LT V + S  A
Sbjct: 296 VFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACA 351



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 161/338 (47%), Gaps = 12/338 (3%)

Query: 47  EIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +  F  + Q+C  +  +    ++H  ++  G    VF S  L++ YA  G +  S   F 
Sbjct: 138 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA 197

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV--- 160
              +RN  TWN++I  +V+ G   +A+  F    L   ++    T+   L+AC +L    
Sbjct: 198 ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM-LEYRVQATEVTYSSALRACASLAALE 256

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G +IH   +K  F+ D+ V  +L+ MY + G    AR +FD M  +D  SWNAMISGY 
Sbjct: 257 PGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYS 316

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNL 279
             G   EAL I D+M+   V  D +T   +L  CA +  +  G      +++ HG+E  +
Sbjct: 317 MHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCI 376

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
                ++ +  + G +  A+++ D++  +  V+ W +++ A    ND     G  +  + 
Sbjct: 377 EHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHND--IELGRISAQRV 434

Query: 339 AGIQP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
             ++P D  T V L+++ A      N  SV   + R+G
Sbjct: 435 LEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKG 472


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 265/779 (34%), Positives = 422/779 (54%), Gaps = 13/779 (1%)

Query: 49  DFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           D   L    T L   +++H  ++ SG    +F S  L++ YA L     +    D +  R
Sbjct: 17  DLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRR 76

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           N  +WN++I    + G    ++  F+Q  L  G  PD   F  ++KA R + +G+ +   
Sbjct: 77  NALSWNAVIRANAQAGDFPRSL-LFFQRMLQDGSLPDAVVFLSLIKAPRTIQEGEIVQEF 135

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
             K GF+    V  +L+ MY R G  + A+  FD +  R   SWNA+I+ Y +     ++
Sbjct: 136 AEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQS 195

Query: 229 LDILDEMRLEGVSMDPITVASILPVCA--RSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           L +  EM L+G++ + +T+  I    A   +     G LIH   +  GL     V+N++I
Sbjct: 196 LRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSII 255

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           N++ + G +  A  +F++M  RDV SWN++I+A+ Q+     A   +  M    I+PD +
Sbjct: 256 NLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGV 312

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T V++       +D     S+H  +   G +  D+I+  A+V MY + G ++ A  VF  
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDVRAHG-YDSDLIVATALVSMYRRCGRLDRAAEVFAA 371

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +    VI+ N +I  +AQ G A  ++  F+ M +   I P++ T V++L A +  GA   
Sbjct: 372 IQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLG-IRPSKFTLVAVLGACATSGAAAS 430

Query: 467 GIK-IH---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
             + +H   A    +C   D+ V   LV+MY KCG +D A  +F   P+ +   WNAI++
Sbjct: 431 AGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMA 490

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG  + A+    +M   G+ PD I+F + L+A SH+  V +G R F+ +  ++G+ 
Sbjct: 491 GYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLI 550

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HYG +VDL GRAG L  A  F+++M +  DA+ W ALLGACRIH + +    A++ 
Sbjct: 551 PSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEA 610

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           +  +D  +   Y ++SN+Y+  G+W+  +E+R    + G +K PG S IEV N+V  F  
Sbjct: 611 IVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAV 670

Query: 703 GNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            +R+HP+  +IY+ L  L   +KS   YVPD   VL DVE++ +E++L  HSE+LA+ FG
Sbjct: 671 KDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFG 730

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I +   S I I KNLR+C DCH   K  S+ T+REI+VRD  RFHHF  G CSC D W
Sbjct: 731 LIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/705 (36%), Positives = 392/705 (55%), Gaps = 15/705 (2%)

Query: 38  PDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           P     + R++   DL + CT   ++   + LHA ++ +G I +++ +   +N YA    
Sbjct: 4   PKIFPPQHRQL-LQDLIE-CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNH 61

Query: 95  LSFSRHTFDHISY--RNVYTWNSMISVYVRCGRLSE---AVDCFYQFTLTSGLRPDFYTF 149
           LS +   FD I+   ++  +WNS+I+ + +    S    A+  F +    + + P+ +T 
Sbjct: 62  LSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTL 121

Query: 150 PPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
             V  A  NL D   GK+ H   +K G   DV+V +SLL+MYC+ G    ARKLFD MP 
Sbjct: 122 AGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPE 181

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 266
           R++ SW  MISGY  S  A +A+++ + MR E    +   + S+L        + +G  +
Sbjct: 182 RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQV 241

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H   +K+GL   + V+N L+ MYAK G +  A+R F+   +++ ++W++++  Y Q  D 
Sbjct: 242 HSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDS 301

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M  +G+ P   TLV + +  + L      + +H F  + G+ ++  ++ +A
Sbjct: 302 DKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVL-SA 360

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           VVDMYAK G +  A   FE +   DV+ W ++ITGY QNG     + ++  M+    + P
Sbjct: 361 VVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQ-MERVIP 419

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+ T  S+L A S + AL QG ++HAR+IK     +V + + L  MY KCG +DD   +F
Sbjct: 420 NELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIF 479

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
           +++P    + WNA+IS    +G G+KAL  F +ML EG++PD +TFV+LL+ACSH GLV 
Sbjct: 480 WRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVD 539

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            G  YF MM +EF I P ++HY CMVD+  RAG L  A  FI++  V     +W  LLGA
Sbjct: 540 RGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGA 599

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C+ H N ELG  A ++L E+ S     YVL+S+IY  +G  E V+ VR + + RG+ K P
Sbjct: 600 CKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEP 659

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           G S IE+   V +F  G+  HP+ ++I  EL  LT  M   GY P
Sbjct: 660 GCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/541 (40%), Positives = 342/541 (63%), Gaps = 7/541 (1%)

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           F+ N LINMY KFG++  A  VFD+M +R+VVSW ++I+AY  +     A  F   M + 
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G++P++ T    +S++   +   N R +H  I++ G    DV + +A++D+Y++ G + +
Sbjct: 61  GVRPNMFTY---SSVLRACDGLFNLRQLHCCIIKIG-LDSDVFVRSALIDVYSRWGELEN 116

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  VF+ +   D++ W+++I G+AQN    EA+ +F+ M+    +   Q T  S+L A +
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFL-AQQTTLTSVLRACT 175

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +  L  G ++H  V+K     D+ +   L+DMY KCG ++DA ++F ++     + W+ 
Sbjct: 176 GLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWST 233

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+    +G   +AL  F  M   G++P+++T V +L ACSH+GLV EG  YFH M+E F
Sbjct: 234 MIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELF 293

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           GI P  +HYGCM+DL GRAG L  A + I  M   PDA  W ALL ACR+H N+++   A
Sbjct: 294 GIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHA 353

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           + ++  +D ++ G YVL+SNIYAN  +W  V EVR    +RG+KK PG S IEV+ ++  
Sbjct: 354 AKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHA 413

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+R+HP+  +I  +L  L  K+  +GYVPD +FVLQD+E ++ +  L  HSE+LAI 
Sbjct: 414 FILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIV 473

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           FG++S P    I+I KNLR+CGDCH +TK ++++ +R I++RD  R+HHF+DG+CSCGD+
Sbjct: 474 FGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDF 533

Query: 820 W 820
           W
Sbjct: 534 W 534



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 210/366 (57%), Gaps = 11/366 (3%)

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           F+   L++MY +FGL + A+ +FD MP R+  SW  MIS Y  +    +AL+ L  M  E
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           GV  +  T +S+L  C   D + +   +H  I+K GL+ ++FV + LI++Y+++G + +A
Sbjct: 61  GVRPNMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
           LRVFD+M+  D+V W+SIIA + Q++D   A   F  M++AG      TL S+      L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 R VH  +++   + +D+I+ NA++DMY K G +  A AVF  +  KDVISW+T+
Sbjct: 178 ALLELGRQVHVHVLK---YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I G AQNG + EA+++F+ M+    I PN  T V +L A SH G + +G+  +   +K  
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLG-IKPNYVTIVGVLFACSHAGLVEEGL-YYFHSMKEL 292

Query: 479 LCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALN 535
              D       C++D+ G+ GR+ +A+ L  ++     +V W A+++   +H   D A++
Sbjct: 293 FGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIH 352

Query: 536 FFRQML 541
             +Q+L
Sbjct: 353 AAKQIL 358



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 157/267 (58%), Gaps = 3/267 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           L+N Y   G L  ++  FD +  RNV +W +MIS Y    +L++    F    L  G+RP
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAY-SAAKLNDKALEFLVLMLREGVRP 64

Query: 145 DFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
           + +T+  VL+AC  L + +++HC ++K+G + DVFV ++L+ +Y R+G    A ++FD+M
Sbjct: 65  NMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM 124

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
              D   W+++I+G+ Q+ +  EAL +   M+  G      T+ S+L  C     +  G 
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGR 184

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H++++K+  + +L ++N L++MY K G +  A  VF +M+E+DV+SW+++IA   Q+ 
Sbjct: 185 QVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNG 242

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSL 351
               A   F +M+  GI+P+ +T+V +
Sbjct: 243 YSKEALKLFESMKVLGIKPNYVTIVGV 269



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 142/279 (50%), Gaps = 16/279 (5%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  + ++C  L ++++LH  ++  G    VF  + L++ Y+  G+L  +   FD +   +
Sbjct: 69  YSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGD 128

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIH 166
           +  W+S+I+ + +     EA+  F +    +G      T   VL+AC  L     G+++H
Sbjct: 129 LVVWSSIIAGFAQNSDGDEALRLFKRMK-RAGFLAQQTTLTSVLRACTGLALLELGRQVH 187

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             VLK  ++ D+ +  +LL MYC+ G    A  +F  M  +D  SW+ MI+G  Q+G + 
Sbjct: 188 VHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSK 245

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-----LIHLYIVKHGLEFNLFV 281
           EAL + + M++ G+  + +T+  +L  C+ +  +  GL     +  L+ +  G E     
Sbjct: 246 EALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREH---- 301

Query: 282 SNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              +I++  + G +  A+ + ++M  E D V+W +++ A
Sbjct: 302 YGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNA 340


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/707 (35%), Positives = 377/707 (53%), Gaps = 20/707 (2%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
           G+L EA D F +    + +    +++  + +AC   R+L DG+ IH  + +        +
Sbjct: 66  GKLKEAHD-FLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSI 124

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              LL MYC  G     +K+FD+M +++  SW  +IS Y ++G   +A+ +  +M+  G+
Sbjct: 125 ENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGI 184

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             +     S+L  C     +  G  IH ++++  L  N+ V   + NMY + G +  A  
Sbjct: 185 RPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKL 244

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M  ++ V+W  ++  Y Q+     A   F  M   G++ D      +  +   L D
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLED 304

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               R +H  I++ G   E V +G  +VD Y K G I SA   F  +   + +SW+ LI+
Sbjct: 305 WDMGRQIHSHIVKLGAESE-VSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALIS 363

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G++Q+G   + I++F  +     +  N   Y S+  A +    L  G + H   IK  L 
Sbjct: 364 GFSQSGRLEDCIKIFTSLRS-EGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             ++  + +V MY KCGR+D A   F  +    +V W AIIS +  HG   +AL FFR+M
Sbjct: 423 SYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRM 482

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              GVRP+ +TF+++LTACSHSGLV+E ++Y   M  ++G+KP + HY CM+D + RAG 
Sbjct: 483 QSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGL 542

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A   I  MP  PDA  W +LLG C  H +++LG +A++ LF +D  +   Y+L+ N+
Sbjct: 543 LQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNL 602

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           Y+  GKWE    VR L  +R LKK    S I V  +V  F  G+R HP+ E IY +L   
Sbjct: 603 YSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEF 662

Query: 721 TAKMKSLGYVPDKSFVLQDVEED-------EKEHILTSHSERLAIAFGIISSPPKSPIQI 773
                    V D    L + E+D        KE +L  HSE+LAIAFG+IS+   +PI +
Sbjct: 663 KCS------VIDSPVRLLNEEDDVSCSLSARKEQLL-DHSEKLAIAFGLISTEDNAPILV 715

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FKNLR C DCH + K +S +T R+I+VRDS RFHHFK G CSC DYW
Sbjct: 716 FKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 255/522 (48%), Gaps = 25/522 (4%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           LF++C KL  +   + +H  L  + K  +      L+  Y + G     +  FD +  +N
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKN 152

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           + +W  +IS Y + G L +A+  F      SG+RP+   +  +L++C     L  GK+IH
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQ-ASGIRPNSAVYMSLLQSCLGPSFLELGKQIH 211

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V++     ++ V  ++ +MY R G    A+ +FD M  +++ +W  ++ GY Q+    
Sbjct: 212 SHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLE 271

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            AL++   M +EGV +D    + +L VC   ++   G  IH +IVK G E  + V   L+
Sbjct: 272 VALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLV 331

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           + Y K G +  A R F ++ E + VSW+++I+ + QS         FT+++  G+  +  
Sbjct: 332 DFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
              S+    A   +       HG  ++RG  +  +   +A+V MY+K G ++ A   FE 
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKRG-LVSYLYGESAMVTMYSKCGRLDYARRAFES 450

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL-- 464
           +   D ++W  +I+GYA +G A+EA+  F+ M+    + PN  T++++L A SH G +  
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYG-VRPNAVTFIAVLTACSHSGLVAE 509

Query: 465 -RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
            +Q +   +R        D +   C++D Y + G + +A+ L  ++P    ++ W +++ 
Sbjct: 510 AKQYLGSMSRDYGVKPTIDHY--DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLG 567

Query: 523 CHGIHGQGD------KALNFFRQMLDEGVRPDHITFVSLLTA 558
             G     D       A N FR  LD G    +I   +L +A
Sbjct: 568 --GCWAHCDLKLGKIAAENLFR--LDPGDTAGYILLFNLYSA 605



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 216/467 (46%), Gaps = 6/467 (1%)

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           + G   EA D L EM    VS+ P +   +   C +  ++  G LIH  + +     +  
Sbjct: 64  KQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGS 123

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           + N L+ MY   G      +VFD+M+ +++VSW  +I+AY ++ +   A   F+ MQ +G
Sbjct: 124 IENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASG 183

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           I+P+    +SL       +     + +H  ++ R     ++ +  A+ +MY + G +  A
Sbjct: 184 IRPNSAVYMSLLQSCLGPSFLELGKQIHSHVI-RAQLNANITVETAICNMYVRCGWLEGA 242

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF+G+  ++ ++W  L+ GY Q      A+E+F  M     +  ++  +  +L     
Sbjct: 243 KLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARM-AMEGVELDEFVFSIVLKVCCG 301

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +     G +IH+ ++K     +V V T LVD Y KCG I+ A   F ++   + V W+A+
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS     G+ +  +  F  +  EGV  +   + S+  AC+    ++ G +  H    + G
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQA-HGDAIKRG 420

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM--ELGAV 638
           +  +L     MV ++ + G L  A    +++   PDA  W A++     HGN    LG  
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGNAAEALGFF 479

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
              + + V    V +  +++    +    E    + S++RD G+K T
Sbjct: 480 RRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPT 526


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/665 (37%), Positives = 371/665 (55%), Gaps = 39/665 (5%)

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVAS 249
           GL N A ++FD  P R   +W ++ISG  + G   + +    EM  E  +  P    +A 
Sbjct: 73  GLHN-AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAG 131

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  CA   ++ SG  IH +I++ G+  ++ + N +++MYAK G    A R F  M ++D
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKD 191

Query: 310 VVSWNSIIAAYEQSNDPITA------------------------HGFFT-------TMQQ 338
             SWN +I A  Q  D + A                        HG  T        M +
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVR 251

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           AG+     T   + ++   L+     R +HG ++      ED  +G +++DMY K G + 
Sbjct: 252 AGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVV-AVLEEDAFVGCSLMDMYCKCGEME 310

Query: 399 SACAVFE---GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           SA ++F+           +W+T++ GY QNG   EA+E F+ M     +   Q    S+ 
Sbjct: 311 SALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLR-EGVPAGQFILTSVA 369

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A ++ G + QG ++H  V K    FD  +A+ +VDMY K G ++DA  +F      +  
Sbjct: 370 SACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVA 429

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W  ++  +  HGQG  AL  F +M  E + P+ IT V++L+ACSHSGLVS+G  YF++M
Sbjct: 430 LWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLM 489

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           QEE+GI P+ +HY CMVDL+GRAG L  A NFI+   +  +A +W  LL ACR+H ++E 
Sbjct: 490 QEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEY 549

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
             +AS++L +++  + G YVLMSN+YA   KW    ++RS  ++R ++K PG S I + N
Sbjct: 550 AQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKN 609

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            V  F   + +HP+  +IY  L  L  ++K +GY      V+ D+EE+++E  L  HSE+
Sbjct: 610 VVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEK 669

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LAIAFGIIS+P  + ++IFKNLRVC DCH   KFI++ T+REI+VRD  RFHHFKDG CS
Sbjct: 670 LAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCS 729

Query: 816 CGDYW 820
           C D+W
Sbjct: 730 CEDFW 734



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 219/471 (46%), Gaps = 52/471 (11%)

Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKACRNLV 160
           FD    R++  W S+IS   R GR ++ +  F +     G   P+ +    VL+ C  L 
Sbjct: 81  FDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLG 140

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           D   G++IH  +L+ G   DV +  ++L MY + G    AR+ F  M  +D+ SWN +I 
Sbjct: 141 DVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIR 200

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI----------------- 260
              Q G+ V A  + DE  L  VS     V+ ++     ++ +                 
Sbjct: 201 ACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYT 260

Query: 261 ------LSGLL--------IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ-- 304
                 L+GLL        +H  +V   LE + FV  +L++MY K G M  AL +FD+  
Sbjct: 261 YSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWS 320

Query: 305 -MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
              E    +W++++A Y Q+     A  FF  M + G+      L S+ S  A       
Sbjct: 321 DFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQ 380

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R VHGF+ + G    D  + +A+VDMY+K G +  AC +F     K+V  W T++  YA
Sbjct: 381 GRQVHGFVEKLGHRF-DAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYA 439

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG------IKIHARVIKN 477
            +G    A+E+F  M +  +I PN+ T V++L A SH G +  G      ++    ++ N
Sbjct: 440 SHGQGRMALEIFSRM-KAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPN 498

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIH 527
              ++     C+VD+YG+ G +D A +   +   S  +V W  ++S   +H
Sbjct: 499 TEHYN-----CMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLH 544



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 171/357 (47%), Gaps = 22/357 (6%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GDL  +   FD  S R+V +WN+++S  +R G  +EA+    Q  + +G+    YT+  V
Sbjct: 206 GDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQM-VRAGVTFSNYTYSMV 264

Query: 153 -----LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD---DM 204
                L + R+L  G+++H  V+    E D FV  SL+ MYC+ G    A  +FD   D 
Sbjct: 265 FALAGLLSSRDL--GRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDF 322

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
                 +W+ M++GY Q+G   EAL+    M  EGV      + S+   CA +  +  G 
Sbjct: 323 TEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGR 382

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            +H ++ K G  F+  +++ +++MY+K G +  A R+F     ++V  W +++ +Y    
Sbjct: 383 QVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHG 442

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F+ M+   I P+ +TLV++ S  +      +       +      + +    
Sbjct: 443 QGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHY 502

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG--------YAQNGLASEAI 432
           N +VD+Y + G+++ A    E   +  + + W TL++         YAQ  LASE +
Sbjct: 503 NCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQ--LASEKL 557



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 130/264 (49%), Gaps = 9/264 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS---YRNVYTWNSMISVY 120
           ++LH  +VV+   +  F    L++ Y   G++  +   FD  S       + W++M++ Y
Sbjct: 278 RQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGY 337

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWD 177
           V+ GR  EA++ F++  L  G+    +    V  AC N   +  G+++H  V KLG  +D
Sbjct: 338 VQNGREEEALE-FFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFD 396

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
             +A++++ MY + G    A ++F     ++   W  M+  Y   G    AL+I   M+ 
Sbjct: 397 APLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKA 456

Query: 238 EGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
           E +  + IT+ ++L  C+ S  +  G    +L   ++G+  N    N ++++Y + G++ 
Sbjct: 457 EKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLD 516

Query: 297 HALRVFDQ-MMERDVVSWNSIIAA 319
            A    ++  +  + V W ++++A
Sbjct: 517 KAKNFIEENKISHEAVVWKTLLSA 540


>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g26782, mitochondrial-like [Glycine max]
          Length = 555

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/529 (43%), Positives = 339/529 (64%), Gaps = 17/529 (3%)

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM---------QQAGIQPDLLTLVSL 351
           +FD++ +R VVSW SIIA   Q++    A   F  +          + G+  D + L  +
Sbjct: 35  LFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGCV 94

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            S  ++L     +  VHG +++RG F   V +GN ++D YAK G +  A  VF+G+   D
Sbjct: 95  VSAFSKLGWRGVTEGVHGLVIKRG-FERCVGVGNTLMDAYAKFGEMGVA-KVFDGMNESD 152

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
              WN++I  YAQNGL++EA  VF  M     +      Y +++      GAL+ G  IH
Sbjct: 153 HYFWNSVIAEYAQNGLSAEAFSVFGDM-----VKSGNFRYNAVIMDXGLSGALQLGKCIH 207

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            +VIK  L   VFV T +VD+Y KC R++ A   F  +   +   W A+++ +G+HG+  
Sbjct: 208 HQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAK 267

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +M+  GV+P++ITFVS+L ACSH+G++ EG  +F+ M+ EF ++P ++HY CM
Sbjct: 268 EAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLCM 327

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GRAG+L   +  I+ M  +PD  IWG+LLGACRIH N+ELG +++ +LFE+D  N 
Sbjct: 328 VDLLGRAGYL-XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSNC 386

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           GYYVL+SNIYA+ G+W+ V+ +R L + RGL K PG+S +E+  ++ +   G++ HP++E
Sbjct: 387 GYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQHE 446

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           KIY+ L     K++ LGY+P+ + VL DV+E+EK  +L  HSE+LA+AFGI++S P S I
Sbjct: 447 KIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSII 506

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I KNLR+CGDC+   K I ++  REI+VRDS RFHHFK+G CSCGDYW
Sbjct: 507 HIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 172/350 (49%), Gaps = 27/350 (7%)

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV----SMDPITVA 248
             N +R LFD++P R   SW ++I+G  Q+  A +A+ +  E+ +E      S D + V 
Sbjct: 28  FGNDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVD 87

Query: 249 SILPVCARS-------DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           S+L  C  S         +  G  +H  ++K G E  + V N L++ YAKFG M  A +V
Sbjct: 88  SVLLGCVVSAFSKLGWRGVTEG--VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KV 144

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLND 360
           FD M E D   WNS+IA Y Q+     A   F  M ++G  + + + +    S   QL  
Sbjct: 145 FDGMNESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLSGALQLGK 204

Query: 361 CRNSRSVHGFIMRRGWFMED-VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           C     +H  +++    +ED V +G ++VD+Y K   +  A   F+ + VK+V SW  ++
Sbjct: 205 C-----IHHQVIKMD--LEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMV 257

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            GY  +G A EA+E+F  M     + PN  T+VS+L A SH G L++G     R +K   
Sbjct: 258 AGYGMHGRAKEAMEIFYKMIRSG-VKPNYITFVSVLAACSHAGMLKEGXHWFNR-MKCEF 315

Query: 480 CFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +  +    C+VD+ G+ G +     +     +   + W +++    IH
Sbjct: 316 IVEPGIEHYLCMVDLLGRAGYLXCYGLIKEMNAKPDFIIWGSLLGACRIH 365



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 24/337 (7%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT---SGLRPDFYTFPPVLK 154
           SRH FD I  R+V +W S+I+  V+  R  +AV  F +  +    S    D      VL 
Sbjct: 32  SRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLL 91

Query: 155 AC----------RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM 204
            C          R + +G  +H  V+K GFE  V V  +L+  Y +FG   VA K+FD M
Sbjct: 92  GCVVSAFSKLGWRGVTEG--VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGM 148

Query: 205 PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL 264
              D   WN++I+ Y Q+G + EA  +  +M    V        +++     S  +  G 
Sbjct: 149 NESDHYFWNSVIAEYAQNGLSAEAFSVFGDM----VKSGNFRYNAVIMDXGLSGALQLGK 204

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            IH  ++K  LE ++FV  +++++Y K   +  A + FD M  ++V SW +++A Y    
Sbjct: 205 CIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHG 264

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F  M ++G++P+ +T VS+ +  +     +     H F   +  F+ +  I 
Sbjct: 265 RAKEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLK--EGXHWFNRMKCEFIVEPGIE 322

Query: 385 N--AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
           +   +VD+  + G +     + E     D I W +L+
Sbjct: 323 HYLCMVDLLGRAGYLXCYGLIKEMNAKPDFIIWGSLL 359



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 12/259 (4%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H L++  G  + V     L++ YA  G++  ++  FD ++  + Y WNS+I+ Y + G 
Sbjct: 110 VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK-VFDGMNESDHYFWNSVIAEYAQNGL 168

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
            +EA   F     +   R +       L     L  GK IH  V+K+  E  VFV  S++
Sbjct: 169 SAEAFSVFGDMVKSGNFRYNAVIMDXGLSGALQL--GKCIHHQVIKMDLEDSVFVGTSIV 226

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
            +YC+     +ARK FD M V++  SW AM++GY   G A EA++I  +M   GV  + I
Sbjct: 227 DIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIRSGVKPNYI 286

Query: 246 TVASILPVCARSDNILSGL-----LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           T  S+L  C+ +  +  G      +   +IV+ G+E  L     ++++  + G +     
Sbjct: 287 TFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLC----MVDLLGRAGYLXCYGL 342

Query: 301 VFDQMMERDVVSWNSIIAA 319
           + +   + D + W S++ A
Sbjct: 343 IKEMNAKPDFIIWGSLLGA 361



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 23/246 (9%)

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ--MMEECNEINPNQGTYVS-- 453
           N +  +F+ +P + V+SW ++I G  QN  A +A+ VF+  ++EE   +    G +V   
Sbjct: 30  NDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSV 89

Query: 454 ----ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
               ++ A+S +G       +H  VIK      V V   L+D Y K G +  A  +F  +
Sbjct: 90  LLGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVA-KVFDGM 148

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
             S    WN++I+ +  +G   +A + F  M+  G    +  + +++     SG +  G+
Sbjct: 149 NESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSG----NFRYNAVIMDXGLSGALQLGK 204

Query: 570 RYFHMMQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
              H +     IK  L+        +VD++ +   + MA      M V+   S W A++ 
Sbjct: 205 CIHHQV-----IKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKS-WTAMVA 258

Query: 626 ACRIHG 631
              +HG
Sbjct: 259 GYGMHG 264


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/576 (40%), Positives = 349/576 (60%), Gaps = 9/576 (1%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN---MYAKFGMMRHALRVFDQM 305
           S+LP C     +     +  + +K  L  +L V    IN   +      M+HA  +FDQ+
Sbjct: 25  SLLPKCTSLRELKQ---LQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI 81

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            + D+V +N++   Y +++ P+ A   FT +  +G+ PD  T  SL    A        R
Sbjct: 82  PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR 141

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +H   ++ G   E+V +   +++MY     ++ A  VF+ +    V+++N +ITGYA+ 
Sbjct: 142 QLHCLAIKLG-LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARG 200

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
              +EA+ +F+ ++  N + P   T +S+L + + +GAL  G  +H  V KN     V V
Sbjct: 201 SRPNEALSLFRELQARN-LKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKV 259

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            T L+DMY KCG +DDA+ +F  +    +  W+A+I  + IHG G KA++ F++M   G 
Sbjct: 260 DTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGT 319

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            PD ITF+ LL ACSH+GLV EG  YF+ M++++G+ P +KHYGCMVDL GRAG L  A+
Sbjct: 320 EPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAY 379

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
            FI  +P+RP   +W  LL AC  HGN+ELG    +++FE+D  + G Y+++SN+ A  G
Sbjct: 380 EFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAG 439

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           +WE V+ VR L  +RG+ K PG SS+EVNN V  F++G+  H    K++  L  L  ++K
Sbjct: 440 RWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELK 499

Query: 726 SLGYVPDKSFVLQ-DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
            +GYVP+ S V   D+E++EKE  L  HSE+LAI FG++++PP + I++ KNLRVCGDCH
Sbjct: 500 LVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCH 559

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +  K IS I +R+II+RD  RFHHFKDG CSC DYW
Sbjct: 560 SAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 216/447 (48%), Gaps = 18/447 (4%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV----ARKLFDDMPVR 207
           +L  C +L + K++    +K     D+ V    ++ +C           A  LFD +P  
Sbjct: 26  LLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFIN-FCSLNPTTTSMQHAHHLFDQIPQP 84

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           D   +N M  GY ++   + A  +  ++   G+  D  T  S+L  CA    +  G  +H
Sbjct: 85  DIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLH 144

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
              +K GL  N++V   LINMY     M  A RVFD++ E  VV++N++I  Y + + P 
Sbjct: 145 CLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPN 204

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  +Q   ++P  +T++S+ S  A L      + +H ++ + G F   V +  A+
Sbjct: 205 EALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG-FNRFVKVDTAL 263

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMYAK G ++ A  VFE + V+D  +W+ +I  YA +G   +A+ +F+ M +     P+
Sbjct: 264 IDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG-TEPD 322

Query: 448 QGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           + T++ +L A SH G + +G +  +    K  +   +    C+VD+ G+ GR+++A    
Sbjct: 323 EITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFI 382

Query: 507 YQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQM--LDEGVRPDHITFVSLLTACSHSG 563
             +P R + + W  ++S  G HG  +       Q+  LD+    D+I   +L   C+ +G
Sbjct: 383 VGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNL---CARAG 439

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGC 590
              E   Y   +  E G+   +K  GC
Sbjct: 440 R-WEDVNYVRKLMNERGV---VKIPGC 462



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 205/422 (48%), Gaps = 29/422 (6%)

Query: 36  ISPDCLENESREIDFD-DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA---N 91
           ++P C  N +        L   CT L  +K+L A  + +     +   TK +NF +    
Sbjct: 8   VTPMCPPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPT 67

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
              +  + H FD I   ++  +N+M   Y R      A   F Q  L SGL PD YTFP 
Sbjct: 68  TTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQI-LFSGLFPDDYTFPS 126

Query: 152 VLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +LKA   C+ L +G+++HC  +KLG   +V+V  +L++MY      + AR++FD +    
Sbjct: 127 LLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPC 186

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             ++NAMI+GY +     EAL +  E++   +    +T+ S+L  CA    +  G  +H 
Sbjct: 187 VVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHE 246

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           Y+ K+G    + V   LI+MYAK G +  A+ VF+ M  RD  +W+++I AY      + 
Sbjct: 247 YVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLK 306

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFIMRRGWFMED---VIIG 384
           A   F  M++AG +PD +T + L      L  C ++  V  GF    G  M D   VI G
Sbjct: 307 AVSLFKEMRKAGTEPDEITFLGL------LYACSHTGLVEEGFEYFYG--MRDKYGVIPG 358

Query: 385 ----NAVVDMYAKLGIINSACAVFEGLPVKDV-ISWNTLITGYAQNG---LASEAIE-VF 435
                 +VD+  + G +  A     GLP++   I W TL++    +G   L    IE +F
Sbjct: 359 IKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIF 418

Query: 436 QM 437
           ++
Sbjct: 419 EL 420


>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Glycine max]
          Length = 622

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/626 (37%), Positives = 374/626 (59%), Gaps = 49/626 (7%)

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN--M 288
           IL  +RL+    +P  V  +L  C+ + ++    +IH ++++  L F++F ++ LI   +
Sbjct: 10  ILKTLRLK----NPKLV--LLECCSNARDLK---IIHAHMLRTHLFFDVFAASRLIAFCI 60

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
            +   ++ +A+RV  Q+   ++  +N++I     S +P  +  ++    + G+ PD +T 
Sbjct: 61  DSTTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITH 120

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL- 407
             L    AQL +       HG  ++ G F +D  + N++V MYA +G IN+A +VF+ + 
Sbjct: 121 PFLVKACAQLENAPMGMQTHGQAIKHG-FEQDFYVQNSLVHMYASVGDINAARSVFQRMC 179

Query: 408 ------------------------------PVKDVISWNTLITGYAQNGLASEAIEVFQM 437
                                         P +++++W+T+I+GYA+N    +A+E F+ 
Sbjct: 180 RFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEA 239

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           ++    +  N+   V ++ + +H+GAL  G K H  V++N L  ++ + T +VDMY +CG
Sbjct: 240 LQ-AEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCG 298

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            ++ A+ +F Q+P    + W A+I+   +HG  +KAL +F +M  +G  P  ITF ++LT
Sbjct: 299 NVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLT 358

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           ACSH+G+V  G   F  M+ + G++P L+HYGCMVDL GRAG L  A  F+  MPV+P+A
Sbjct: 359 ACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNA 418

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            IW ALLGACRIH N+E+G      L E+  E  G+YVL+SNIYA   KW+ V  +R + 
Sbjct: 419 PIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMM 478

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP---KYEKIYDELRNLTAKMKSLGYVPDKS 734
           +D+G++K PG+S IE++ KV  F  G++THP   K E+I++++  +  K+K  GYV + +
Sbjct: 479 KDKGVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKIERIWEDI--ILPKIKLAGYVGNTA 536

Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
             + D++E+EKE  L  HSE+LAIA+GI+     +PI+I KNLRVC DCH  TK IS++ 
Sbjct: 537 ETMFDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVF 596

Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
           E E+IVRD NRFHHFK+G CSC DYW
Sbjct: 597 EVELIVRDRNRFHHFKEGTCSCMDYW 622



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 183/406 (45%), Gaps = 42/406 (10%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFY--ANLGDLSFSRHTFDHISYRNV 110
           L + C+    +K +HA ++ +     VF++++L+ F   +    L ++      I   N+
Sbjct: 23  LLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNL 82

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQF--TLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           + +N++I     C       + F+ +   L  GL PD  T P ++KAC  L +   G + 
Sbjct: 83  FIYNALIR---GCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQT 139

Query: 166 HCSVLKLGFEWDVFVAASLLHMY----------------CRF---------------GLA 194
           H   +K GFE D +V  SL+HMY                CRF               G A
Sbjct: 140 HGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR+LFD MP R+  +W+ MISGY ++    +A++  + ++ EGV  +   +  ++  C
Sbjct: 200 KSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSC 259

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           A    +  G   H Y++++ L  NL +   +++MYA+ G +  A+ VF+Q+ E+DV+ W 
Sbjct: 260 AHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWT 319

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++IA          A  +F+ M + G  P  +T  ++ +  +          +   + R 
Sbjct: 320 ALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRD 379

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
                 +     +VD+  + G +  A      +PVK +   W  L+
Sbjct: 380 HGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALL 425


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/620 (36%), Positives = 354/620 (57%), Gaps = 9/620 (1%)

Query: 208 DSGSWNAMISG-------YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
            +GS + + SG       +C   N   +L      R++   +D   ++  L +CA+  ++
Sbjct: 14  STGSLSVLCSGIYLAARSFCNKLNHSSSLKDRRLARIDRNLIDVSAISQRLQLCAKRKSL 73

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
           L G   H   +  GL  +    N LIN+Y K G    A  VFD M  R +VSWN++IA Y
Sbjct: 74  LVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGY 133

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             S + + A   F+ M + G      TL S     A        + +H   ++      +
Sbjct: 134 THSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLA-LDSN 192

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
             +G A++D+YAK  +I  AC VFE +P + +++W++L  GY QNGL  EA+ +F+  + 
Sbjct: 193 SFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQR 252

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              +   + T  +IL A + +    +GI++HA ++K     + FVA  LVD+Y +CG+I+
Sbjct: 253 -EGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIE 311

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A +LF  +   + V WNA+I+    H    +A+  F +M   G+ P+ +T++S+L+ CS
Sbjct: 312 KAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCS 371

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H+GLV +G+ YF ++  +  ++P++ HY CMVD+ GR+G    A   +  MP  P AS+W
Sbjct: 372 HAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMW 431

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           G+LLG+CR + N+ L  +A+++LF+++ +N G +VL+SN+YA  G WE V   R   +D 
Sbjct: 432 GSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDS 491

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G KK  G S IE   KV +F  G R HP+   IY++L  +  +M+           L DV
Sbjct: 492 GAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDV 551

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
             ++KE +L  HSE+LA++FG+IS P   PI I KNLR+CGDCH++ K  + ITER +IV
Sbjct: 552 HAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIV 611

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD+NRFHHFKDG CSCGD+W
Sbjct: 612 RDTNRFHHFKDGSCSCGDFW 631



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 199/370 (53%), Gaps = 5/370 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           ++L+ GK  H   +  G   D      L+++Y + G  + AR +FD M VR   SWN MI
Sbjct: 71  KSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMI 130

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           +GY  SG  V+AL +   M  EG  M   T++S +  CA    I     +H   +K  L+
Sbjct: 131 AGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALD 190

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N FV   ++++YAK  M++ A  VF++M ER +V+W+S+ A Y Q+     A   F   
Sbjct: 191 SNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCA 250

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q+ G++    TL ++ S  A L        +H  I++ G F  +  +  ++VD+YA+ G 
Sbjct: 251 QREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCG-FHGNFFVAASLVDVYARCGQ 309

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I  A A+F  +  K+V+ WN +I  ++++  + EA+ +F+ M++   I PN+ TY+S+L 
Sbjct: 310 IEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLG-IFPNEVTYLSVLS 368

Query: 457 AYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
             SH G + +G    + ++ +  +  +V   +C+VD+ G+ G+ D+A  L  ++P   ++
Sbjct: 369 VCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTA 428

Query: 515 VPWNAII-SC 523
             W +++ SC
Sbjct: 429 SMWGSLLGSC 438



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 194/407 (47%), Gaps = 15/407 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K  H L +  G +    +   L+N Y   G    +R  FD +  R++ +WN+MI+ Y   
Sbjct: 77  KSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHS 136

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   +A+  F +     G     +T    + AC     + + K++H   LKL  + + FV
Sbjct: 137 GEDVQALKLFSRMH-REGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFV 195

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             ++L +Y +  +   A  +F+ MP R   +W+++ +GY Q+G   EAL +    + EGV
Sbjct: 196 GTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGV 255

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            +   T+++IL  CA     + G+ +H  I+K G   N FV+ +L+++YA+ G +  A  
Sbjct: 256 ELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYA 315

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F  M  ++VV WN++IA++ +      A   F  MQQ GI P+ +T +S+ S+ +    
Sbjct: 316 LFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGL 375

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
               R     +M       +V+  + +VD+  + G  + A  +   +P +   S W +L+
Sbjct: 376 VEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLL 435

Query: 420 ---TGYAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVG 462
                Y    LA  A E +FQ+  +      N G +V +   Y+  G
Sbjct: 436 GSCRNYNNIRLARIAAEQLFQLEPD------NGGNHVLLSNVYAASG 476


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/512 (43%), Positives = 318/512 (62%), Gaps = 2/512 (0%)

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           D VSWNS+I    +      A  FF  M+   ++ D  TL S+ +  A +   +N+ SVH
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
             I++ G F    ++ NA++DMYAK G ++ A  VF  +  KDV+SW +L+TGY+ NG  
Sbjct: 65  CLIIKTG-FEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSY 123

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
            EAI++F  M   + + P+Q    S+L A + +  +  G +IHA ++K+ L   + V   
Sbjct: 124 EEAIKLFCKMR-ISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNS 182

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           LV MY KCG I DA   F  +P    + W A+I  +  +G+G  +L F+ QM+  G +PD
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPD 242

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
           +ITF+ LL ACSH+GL+  G+ YF  M + +GIKP  +HY CM+DL GR+G L  A   +
Sbjct: 243 YITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLL 302

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
             M V PDA +W ALL ACR+H  +ELG +A+  LFE++  N   YV++SN+Y+  GKWE
Sbjct: 303 NQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWE 362

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
               +R L R RG+ K PG+S IE N+KV  F + +R HP   +IY ++  +   +K  G
Sbjct: 363 DAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAG 422

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           YVPD SF L D +++ KE  L  HSE+LA+AFG+++ P  +PI+IFKNLRVCGDCH   K
Sbjct: 423 YVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMK 482

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           + S++  R II+RDSN FHHF +G CSCGDYW
Sbjct: 483 YTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 169/331 (51%), Gaps = 10/331 (3%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M   D  SWN++I G  + G   +AL    +MR   + +D  T+ S+L   A    + + 
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           + +H  I+K G E    V+N LI+MYAK G +  A+ VF +M+++DVVSW S++  Y  +
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                A   F  M+ +G+ PD + + S+ S  A+L      + +H  +++ G     + +
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSG-LESSLSV 179

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            N++V MYAK G I  A   F+ +P +DVISW  LI GYAQNG    +++ +  M     
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATG- 238

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDMYGKCGRI 499
             P+  T++ +L A SH G L  G      + K    + +        C++D+ G+ G++
Sbjct: 239 TKPDYITFIGLLFACSHNGLLGSGRAYFEAMDK---VYGIKPGPEHYACMIDLLGRSGKL 295

Query: 500 DDAMSLFYQ-VPRSSSVPWNAIISCHGIHGQ 529
            +A  L  Q V    +V W A+++   +H +
Sbjct: 296 AEAKGLLNQMVVAPDAVVWKALLAACRVHKE 326



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 137/250 (54%), Gaps = 4/250 (1%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVD 161
           + + +  +WNS+I   VR G   +A+  F+Q   +  ++ D YT P VL +    + + +
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALS-FFQKMRSRDMKIDEYTLPSVLNSFASMKVMQN 59

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
              +HC ++K GFE    V  +L+ MY + G  + A  +F  M  +D  SW ++++GY  
Sbjct: 60  AISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSH 119

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G+  EA+ +  +MR+ GV  D I VAS+L  CA    +  G  IH  +VK GLE +L V
Sbjct: 120 NGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N+L+ MYAK G +  A R FD M  RDV+SW ++I  Y Q+     +  F+  M   G 
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239

Query: 342 QPDLLTLVSL 351
           +PD +T + L
Sbjct: 240 KPDYITFIGL 249



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 14/275 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F S   + +   +H L++ +G       +  L++ YA  G L  +   F  +  ++V +W
Sbjct: 51  FASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSW 110

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
            S+++ Y   G   EA+  F +  + SG+ PD      VL AC  L     G++IH +++
Sbjct: 111 TSLVTGYSHNGSYEEAIKLFCKMRI-SGVYPDQIAVASVLSACAELTVMDFGQQIHATLV 169

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G E  + V  SL+ MY + G    A + FD+MP RD  SW A+I GY Q+G    +L 
Sbjct: 170 KSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQ 229

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSG-----LLIHLYIVKHGLEFNLFVSNNL 285
             D+M   G   D IT   +L  C+ +  + SG      +  +Y +K G E        +
Sbjct: 230 FYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYAC----M 285

Query: 286 INMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           I++  + G +  A  + +QM +  D V W +++AA
Sbjct: 286 IDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA 320


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/669 (35%), Positives = 394/669 (58%), Gaps = 7/669 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR-NVYTWNSMISVYVR 122
           K++H+ +V +      F  T L++ Y   G  + +R+ F  +  R N+  WN MI  +  
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVF 179
            G    +++ +Y    T  ++    +F   L AC     +  GK++HC  +K+GFE D +
Sbjct: 219 NGLWENSLE-YYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V  SLL MY +  +   A K+F+++P ++   WNA+IS Y  +G A +AL I  +M+L  
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V  D  T+ ++L   + +     G LIH  IVK  L+ ++ + + L+ MY+KFG   +A 
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            +F  M ERDVV+W S+I+ + Q+     A  FF  M+   ++PD   + S+ S    L 
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                 ++HGF+++ G  + DV + ++++DMY+K G    A  +F  +P+K++++WN++I
Sbjct: 458 KVDLGCTIHGFVIKSGLQL-DVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSII 516

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y +N L   +I +F  +   N++ P+  ++ S+L A S V AL +G  +H  +++  +
Sbjct: 517 SCYCRNNLPDLSINLFSQVLR-NDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWI 575

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
            FD+ V   L+DMY KCG +  A  +F ++   + V WN++I  +G HG+  KA+  F +
Sbjct: 576 PFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDE 635

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M   G++PD +TF+SLL++C+HSGL+ EG   F MM+ +FGI+P ++HY  +VDL+GRAG
Sbjct: 636 MRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
            LG A++F++NMPV PD SIW +LL +C+IH N+ELG + +++L  ++      YV + N
Sbjct: 696 CLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLN 755

Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
           +Y     W+    +R+  +++GLKKTPG S IEV NKVD+FY+G+ + P   +IYD L +
Sbjct: 756 LYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSS 815

Query: 720 LTAKMKSLG 728
           L   M   G
Sbjct: 816 LKRNMIKKG 824



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 159/593 (26%), Positives = 298/593 (50%), Gaps = 35/593 (5%)

Query: 50  FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH-- 104
           +  L ++C   + L + K +H+ ++ +G     + ++ L+N Y   G  + +   FD   
Sbjct: 56  YPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLP 115

Query: 105 ---ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD 161
              +S  +V  WNS+I  Y R G+L E +  F +   +SG +                 +
Sbjct: 116 KSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQ-SSGYK-----------------E 157

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS-GSWNAMISGYC 220
           GK+IH  +++    +D F+  +L+  Y + G    AR LF  +  R +  +WN MI G+ 
Sbjct: 158 GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           ++G    +L+     + E V +   +    L  C + + +  G  +H   +K G E + +
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +L+ MY K  M+  A +VF+++ ++++  WN++I+AY  +     A   +  M+   
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337

Query: 341 IQPDLLTLVSL--TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           +  D  T++++  +S +A L D    R +H  I++R      + I +A++ MY+K G  N
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDL--GRLIHTEIVKRP-LQSSITIQSALLTMYSKFGDSN 394

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A ++F  +  +DV++W ++I+G+ QN    EA++ F+ M E + + P+     SI+ A 
Sbjct: 395 YANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAM-EADLVKPDSDIMASIISAC 453

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           + +  +  G  IH  VIK+ L  DVFVA+ L+DMY K G  + A ++F  +P  + V WN
Sbjct: 454 TGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWN 513

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +IISC+  +   D ++N F Q+L   + PD ++F S+L A S    + +G+   H     
Sbjct: 514 SIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKS-VHGYLVR 572

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
             I   L+    ++D++ + G L  A +  + +  + +   W +++G    HG
Sbjct: 573 LWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEK-NLVAWNSMIGGYGSHG 624



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 237/496 (47%), Gaps = 34/496 (6%)

Query: 147 YTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           +T+P +LKAC    NL  GK IH S++  G   D ++ +SL+++Y + G    A K+FD 
Sbjct: 54  FTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQ 113

Query: 204 MP-----VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           +P     V D   WN++I GY + G   E +     M+  G                   
Sbjct: 114 LPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK----------------- 156

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DVVSWNSII 317
               G  IH YIV++ L F+ F+   LI+ Y K G    A  +F ++ +R ++V+WN +I
Sbjct: 157 ---EGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMI 213

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
             + ++     +  ++   +   ++    +     S   Q       + VH   ++ G F
Sbjct: 214 GGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVG-F 272

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
            +D  +  +++ MY K  +I SA  VF  +P K++  WN LI+ Y  NG A +A+ +++ 
Sbjct: 273 EDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQ 332

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M+ C  ++ +  T +++L + S  G    G  IH  ++K  L   + + + L+ MY K G
Sbjct: 333 MKLCTVLS-DSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFG 391

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
             + A S+F  +     V W ++IS    + +  +AL+FFR M  + V+PD     S+++
Sbjct: 392 DSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIIS 451

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           AC+    V  G    H    + G++  +     ++D++ + G    A N   +MP++ + 
Sbjct: 452 ACTGLEKVDLGCT-IHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLK-NL 509

Query: 618 SIWGALLGACRIHGNM 633
             W +++ +C    N+
Sbjct: 510 VAWNSII-SCYCRNNL 524



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 190/420 (45%), Gaps = 34/420 (8%)

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           I    Q    +EAL +  +     V     T  S+L  CA   N+  G  IH  I+  GL
Sbjct: 28  IKSLVQQRQYIEALKLYTK---SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-----DVVSWNSIIAAYEQSNDPITAH 330
             + +++++LIN+Y K G    A++VFDQ+ +      DV  WNSII  Y +        
Sbjct: 85  HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  MQ +G                     +  + +H +I+R      D  +  A++D 
Sbjct: 145 VQFGRMQSSGY--------------------KEGKQIHSYIVRN-MLNFDPFLETALIDT 183

Query: 391 YAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           Y K G    A  +F+ L  + ++++WN +I G+ +NGL   ++E + ++ +   +     
Sbjct: 184 YFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYY-LLAKTENVKVVSS 242

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           ++   L A      +  G ++H   IK     D +V T L+ MYGKC  I+ A  +F +V
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEV 302

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ 569
           P      WNA+IS +  +G    AL  ++QM    V  D  T +++LT+ S +GL   G 
Sbjct: 303 PDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLG- 361

Query: 570 RYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACR 628
           R  H    +  ++  +     ++ ++ + G    A++    M  R D   WG+++ G C+
Sbjct: 362 RLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKER-DVVAWGSVISGFCQ 420


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/683 (36%), Positives = 381/683 (55%), Gaps = 7/683 (1%)

Query: 54  FQSCTKLHHVKRLHALLV-VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           F     L   + LHA ++ ++     ++ +  L+NFYA    L  ++  FD I  ++V +
Sbjct: 17  FTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVIS 76

Query: 113 WNSMISVYVRCGRL-SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
           WN +I+ Y + G   S  V   +Q      + P+ +TF  +  A  NL     G++ H  
Sbjct: 77  WNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAV 136

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            +K+   +DVFV +SLL+MYC+ GL   AR++FD MP R+  +W  MISGY     A EA
Sbjct: 137 AIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEA 196

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            ++ + MR E   ++     S+L   A  + + SG  IH   VK GL   L + N L+ M
Sbjct: 197 FEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTM 256

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           YAK G +  +L+VF+   +++ ++W+++I  Y QS D   A   F+ M  AGI P   TL
Sbjct: 257 YAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTL 316

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
           V + +  +        + VH ++++ G F   + I  A+VDMYAK G+   A   F  L 
Sbjct: 317 VGVLNACSDACAVEEGKQVHNYLLKLG-FESQLYIMTALVDMYAKSGVTEDARKGFNYLQ 375

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
             D++ W ++I GY QNG   +A+ ++  M+    I PN+ T  S+L A S++ A  QG 
Sbjct: 376 QPDLVLWTSMIAGYVQNGENEDALSLYCRMQ-MEGILPNELTMASVLKACSNLAAFDQGR 434

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +IHAR IK  L  +V + + L  MY KCG +++   +F ++P    + WNA+IS    +G
Sbjct: 435 QIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNG 494

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G +AL  F +M  +  +PD +TFV++L+ACSH GLV  G  YF MM +EFG+ P ++HY
Sbjct: 495 YGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHY 554

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVD+  RAG L  A  FI++  +     +W  LLGACR + N ELGA A ++L E+ S
Sbjct: 555 ACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGS 614

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHP 708
           +    YVL+S IY  +G+ E V+ VRS+ + RG+ K PG S IE+ + V +F  G++ HP
Sbjct: 615 QESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHP 674

Query: 709 KYEKIYDELRNLTAKMKSLGYVP 731
              +I  E+  L+ +MK  GY P
Sbjct: 675 CIGEIRTEILRLSKQMKDEGYQP 697



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 91/192 (47%), Gaps = 9/192 (4%)

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIK---NCLCFDVFVATCLVDMYGKCGRID 500
           ++P   +  + L  ++H  +L++G  +HA++IK   +  C  +++A  L++ Y KC  + 
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSC--IYLANSLINFYAKCCHLP 60

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA--LNFFRQMLDEGVRPDHITFVSLLTA 558
            A  +F ++     + WN +I+ +   G    +  +  F++M  + + P+  TF  + TA
Sbjct: 61  KAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTA 120

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
            S+   +  GQ+  H +  +      +     +++++ +AG L  A      MP R + +
Sbjct: 121 ASNLSSIFFGQQA-HAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVT 179

Query: 619 IWGALLGACRIH 630
            W  ++    I 
Sbjct: 180 -WATMISGYAIQ 190


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/575 (40%), Positives = 348/575 (60%), Gaps = 3/575 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +  +L     + ++  GL +H  ++K G E    V ++LIN Y+K  +   +L++FD   
Sbjct: 10  ICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFP 69

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            +   +W+S+I+++ Q++ P+ A  FF  M + G+ PD  TL +    VA L+    + S
Sbjct: 70  HKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALS 129

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H   ++      DV +G+++VD YAK G +N A  VF+ +P K+V+SW+ +I GY+Q G
Sbjct: 130 LHALSLKTA-HHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMG 188

Query: 427 LASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           L  EA+ +F+  +E+  +I  N  T  S+L   S       G ++H    K       FV
Sbjct: 189 LDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFV 248

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
           A+ L+ +Y KCG ++    +F +V   +   WNA++     H    +    F +M   GV
Sbjct: 249 ASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGV 308

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +P+ ITF+ LL ACSH+GLV +G+  F +M+E  GI+P  +HY  +VDL GRAG L  A 
Sbjct: 309 KPNFITFLCLLYACSHAGLVEKGEHCFGLMKEH-GIEPGSQHYATLVDLLGRAGKLEEAV 367

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
             I+ MP++P  S+WGALL  CRIHGN EL +  +D++FE+ + + G  VL+SN YA  G
Sbjct: 368 LVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAG 427

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           +WE     R + RD+G+KK  G S +E  N+V  F  G+R+H K  +IY++L  L  +M 
Sbjct: 428 RWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMA 487

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             GYV D SFVL++V+ DEK   +  HSERLAIAFG+I+ PP+ PI++ KNLRVCGDCH 
Sbjct: 488 KAGYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHT 547

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             KFIS+ T R IIVRD+NRFH F+DG C+CGDYW
Sbjct: 548 AIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 582



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 210/429 (48%), Gaps = 7/429 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R+L  G ++H  V+KLGFE    V   L++ Y +  L + + KLFD  P + + +W+++I
Sbjct: 21  RSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVI 80

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           S + Q+   + AL     M   G+  D  T+ +     A   ++   L +H   +K    
Sbjct: 81  SSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHH 140

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++FV ++L++ YAK G +  A +VFD+M  ++VVSW+ +I  Y Q      A   F   
Sbjct: 141 HDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRA 200

Query: 337 --QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
             Q   I+ +  TL S+  + +        + VHG   +   F     + ++++ +Y+K 
Sbjct: 201 LEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTS-FDSSCFVASSLISLYSKC 259

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G++     VFE + V+++  WN ++   AQ+       E+F+ ME    + PN  T++ +
Sbjct: 260 GVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVG-VKPNFITFLCL 318

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSS 513
           L A SH G + +G      + ++ +         LVD+ G+ G++++A+ +  ++P + +
Sbjct: 319 LYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPT 378

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
              W A+++   IHG  + A     ++ + G     I  V L  A + +G   E  R   
Sbjct: 379 ESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQ-VLLSNAYAAAGRWEEAARARK 437

Query: 574 MMQEEFGIK 582
           MM+++ GIK
Sbjct: 438 MMRDQ-GIK 445



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 196/409 (47%), Gaps = 26/409 (6%)

Query: 49  DFDDLFQSCTKLHHVKRLHALLVVSGK-IKTVFSSTKLV-----NFYANLGDLSFSRHTF 102
           D  D+ +      H + L   L + G+ IK  F +  LV     NFY+       S   F
Sbjct: 6   DCRDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLF 65

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNL 159
           D   +++  TW+S+IS + +      A+  F++  L  GL PD +T P   K+     +L
Sbjct: 66  DSFPHKSATTWSSVISSFAQNDLPLPALR-FFRRMLRHGLLPDDHTLPTAAKSVAALSSL 124

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
                +H   LK     DVFV +SL+  Y + G  N+ARK+FD+MP ++  SW+ MI GY
Sbjct: 125 PLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGY 184

Query: 220 CQSGNAVEALDILDEMRLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
            Q G   EAL++      +   + ++  T++S+L VC+ S     G  +H    K   + 
Sbjct: 185 SQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDS 244

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           + FV+++LI++Y+K G++    +VF+++  R++  WN+++ A  Q          F  M+
Sbjct: 245 SCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEME 304

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN----AVVDMYAK 393
           + G++P+ +T + L    +            G +   G     +  G+     +VD+  +
Sbjct: 305 RVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHG-----IEPGSQHYATLVDLLGR 359

Query: 394 LGIINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLAS-EAIEVFQM 437
            G +  A  V + +P++   S W  L+TG   +    LAS  A +VF+M
Sbjct: 360 AGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEM 408


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/617 (36%), Positives = 364/617 (58%), Gaps = 16/617 (2%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S  WN  +          E++ +   M   G S D  +   IL  CA     +SG  +H 
Sbjct: 18  STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--WNSIIAAYEQSNDP 326
           ++ K G E   FV   LI+MY K G++  A +VF++  +   +S  +N++I+ Y  ++  
Sbjct: 78  HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M++ G+  D +T++ L  +          RS+HG  ++ G    +V + N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNS 196

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
            + MY K G + +   +F+ +PVK +I+WN +I+GY+QNGLA + +E+++ M+    + P
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCP 255

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           +  T VS+L + +H+GA + G ++   V  N    +VFV+   + MY +CG +  A ++F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +P  S V W A+I C+G+HG G+  L  F  M+  G+RPD   FV +L+ACSHSGL  
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G   F  M+ E+ ++P  +HY C+VDL GRAG L  A  FI++MPV PD ++WGALLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C+IH N+++  +A  ++ E +  N+GYYVLMSNIY++    EG+  +R + R+R  +K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G+S +E   +V +F  G+R+H + E+++  L  L   +  L           +++ D  E
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA---------GNMDCDRGE 546

Query: 747 HILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
            + ++   HSERLAIAFGI++S P + I + KNLRVC DCH + K +S+I +R+ +VRD+
Sbjct: 547 EVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDA 606

Query: 804 NRFHHFKDGICSCGDYW 820
           +RFH+FKDG+CSC DYW
Sbjct: 607 SRFHYFKDGVCSCKDYW 623



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 24/386 (6%)

Query: 50  FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH-- 104
           F  + +SC  L      ++LH  +   G     F  T L++ Y   G ++ +R  F+   
Sbjct: 56  FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP 115

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
            S +    +N++IS Y    ++++A   F +   T G+  D  T   ++  C     L  
Sbjct: 116 QSSQLSVCYNALISGYTANSKVTDAAYMFRRMKET-GVSVDSVTMLGLVPLCTVPEYLWL 174

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+ +H   +K G + +V V  S + MY + G     R+LFD+MPV+   +WNA+ISGY Q
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G A + L++ ++M+  GV  DP T+ S+L  CA       G  +   +  +G   N+FV
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
           SN  I+MYA+ G +  A  VFD M  + +VSW ++I  Y            F  M + GI
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354

Query: 342 QPDLLTLVSLTSIVAQ--LNDCRNSRSVHGF-IMRRGWFMEDVIIG----NAVVDMYAKL 394
           +PD    V + S  +   L D    + +  F  M+R + +E    G    + +VD+  + 
Sbjct: 355 RPDGAVFVMVLSACSHSGLTD----KGLELFRAMKREYKLEP---GPEHYSCLVDLLGRA 407

Query: 395 GIINSACAVFEGLPVK-DVISWNTLI 419
           G ++ A    E +PV+ D   W  L+
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALL 433



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 53  LFQSCTKLHHVKRLH---ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  SC  L   K  H    L+  +G +  VF S   ++ YA  G+L+ +R  FD +  ++
Sbjct: 263 VLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKS 322

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHC 167
           + +W +MI  Y   G + E     +   +  G+RPD   F  VL AC +  L D      
Sbjct: 323 LVSWTAMIGCYGMHG-MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381

Query: 168 SVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
             +K  ++ +      + L+ +  R G  + A +  + MPV   G+ W A++ G C+
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL-GACK 437


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/712 (33%), Positives = 390/712 (54%), Gaps = 9/712 (1%)

Query: 41  LENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           LE +     F  + ++CT +       ++H L +  G    V + T LV+ Y+    L  
Sbjct: 164 LEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDH 223

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           + + F  +  RN   W+++I+ YVR  R +E +   Y+  L  G+     TF    ++C 
Sbjct: 224 AFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLK-LYKVMLDEGMGVSQATFASAFRSCA 282

Query: 158 NLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
            L     G ++H   LK  F +D  V  + L MY +      ARK+F+  P     S NA
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNA 342

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           +I GY +    +EAL+I   ++   +  D I+++  L  C+     L G+ +H   VK G
Sbjct: 343 LIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCG 402

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           L+FN+ V+N +++MYAK G +  A  +FD M  +D VSWN+IIAA+EQ+         F 
Sbjct: 403 LDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFV 462

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           +M ++ ++PD  T  S+    A          VHG +++ G  + D  +G+A++DMY K 
Sbjct: 463 SMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGL-DWFVGSAIIDMYCKC 521

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G++  A  + E L  +  +SWN++I+G++       A+  F  M +   I P+  TY ++
Sbjct: 522 GMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI-PDNFTYATV 580

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L   +++  +  G +IH +++K  L  DV++A+ +VDMY KCG + D+  +F + P+   
Sbjct: 581 LDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDY 640

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V W+A+I  +  HG G+ A+  F +M  + V+P+H  F+S+L AC+H G V +G  YF  
Sbjct: 641 VTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFRE 700

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M+  +G+ P ++HY CMVDL GR+G +  A   I++MP   D  IW  LLG CR+ GN+E
Sbjct: 701 MRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVE 760

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +   A++ L ++D ++   YVL+SN+YA  G W  V ++RS  ++  LKK PG S I+V 
Sbjct: 761 VAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVR 820

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           ++V  F  G++ HP+ E+IY +   L  +MK  GYVP+    L D E DE++
Sbjct: 821 DEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQD 872



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 189/674 (28%), Positives = 337/674 (50%), Gaps = 53/674 (7%)

Query: 17  LPLL--QAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLV 71
           LP+L  Q   P    + +S Q++P      ++++ F  +FQ C+ L  +   K+ HA + 
Sbjct: 12  LPILNSQTTPPYAIHSISSNQMNP------TKKLTFSHIFQKCSNLKAINPGKQAHAQIT 65

Query: 72  VSGKIKTVFSSTKLVNFY-------------------------------ANLGDLSFSRH 100
           V+G + TVF S  L+ FY                               A +G++ F++ 
Sbjct: 66  VTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQF 125

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
            FD +  R+V +WNSM+S Y++ G   ++++ F +  L   ++ D+ TF  VLKAC  + 
Sbjct: 126 LFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLE-IQHDYATFAVVLKACTGIE 184

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           D   G ++HC  +++GF+ DV    +L+ MY      + A  +F +MP R+S  W+A+I+
Sbjct: 185 DYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIA 244

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY ++    E L +   M  EG+ +   T AS    CA       G  +H Y +K    +
Sbjct: 245 GYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGY 304

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V    ++MYAK   M  A +VF+        S N++I  Y + +  + A   F ++Q
Sbjct: 305 DNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQ 364

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           ++ +  D ++L    +  + +        +HG  ++ G    ++ + N ++DMYAK G +
Sbjct: 365 KSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDF-NICVANTILDMYAKCGAL 423

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             AC +F+ + +KD +SWN +I  + QN    E + +F  M   + + P+  T+ S++ A
Sbjct: 424 MEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLR-STMEPDDYTFGSVVKA 482

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +   AL  G+++H RVIK+ +  D FV + ++DMY KCG + +A  +  ++   ++V W
Sbjct: 483 CAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSW 542

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           N+IIS      QG+ AL++F +ML  GV PD+ T+ ++L  C++   V  G++  H    
Sbjct: 543 NSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQ-IHGQIL 601

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
           +  +   +     +VD++ + G++  +    +  P R D   W A++ A   HG   LG 
Sbjct: 602 KLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKR-DYVTWSAMICAYAYHG---LGE 657

Query: 638 VASDRLFEVDSENV 651
            A     E+  +NV
Sbjct: 658 DAIKLFEEMQLQNV 671


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/712 (35%), Positives = 394/712 (55%), Gaps = 41/712 (5%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           GR  +A D      + + LRP       V +A   L +GK +  ++              
Sbjct: 40  GRSLQAADNGGGGGMEAPLRP-----LDVQEAMTMLTEGKAVQSAMY-----------VP 83

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           LLH   R      AR+LFD MP R+  +W A+++GY  +      L++  EM   G    
Sbjct: 84  LLHRAAR-----DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 138

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T+ + L  C  S ++  G  +H Y +K+G E    + N+L ++YAK G +  ALR F 
Sbjct: 139 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 198

Query: 304 QMMERDVVSWNSIIAAYEQSNDPIT-AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           ++ E++V++W ++I+A  +  + +      F  M   G+ P+  TL S+ S+     D  
Sbjct: 199 RIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 258

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             + V  F  + G    ++ + N+ + +Y + G  + A  +FE +    +I+WN +I+GY
Sbjct: 259 LGKQVQAFSFKIGC-ETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 317

Query: 423 AQ-----------NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           AQ                +A+ +F+ ++  + + P+  T+ SIL   S + AL QG +IH
Sbjct: 318 AQIMDSAKDDLQARSRGFQALTIFRDLKR-SVMKPDLFTFSSILSVCSAMMALEQGEQIH 376

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           A+ IK+    DV V + LV+MY KCG I DA   F ++P  + V W ++IS +  HGQ  
Sbjct: 377 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 436

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A+  F +M   GVRP+ ITFVSLL+ACS++GLV E + YF MM++E+ I+P + HYGCM
Sbjct: 437 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCM 496

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           +D+F R G +  A +FI+     P+ +IW +L+  CR HGNMEL   A+D+L E+  + +
Sbjct: 497 IDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 556

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLAR--DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
             Y+L+ N+Y +  +W+ V  VR L +  D G+ +   W  I + +KV  F   +RTHP+
Sbjct: 557 ETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSW--ITIKDKVYFFRANDRTHPQ 614

Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI--LTSHSERLAIAFGIISSPP 767
             ++Y  L NL  K K++GY P ++  L D E+DEK     L  HSERLA+A G++ +PP
Sbjct: 615 ATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPP 674

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
            + +++ KN+ +C DCH+  K  S +  REIIVRDS R H FKDG CSCGD+
Sbjct: 675 GATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 261/507 (51%), Gaps = 32/507 (6%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           +R  FD +  RNV TW ++++ Y    + +  ++ F +  L  G  P  YT    L AC 
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM-LEMGRYPSHYTLGATLNACL 150

Query: 158 NLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
              D   GK++H   +K G E    +  SL  +Y + G  + A + F  +P ++  +W  
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 215 MISGYCQSGNAVE-ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           MIS   +    VE  + +  +M ++GV  +  T+ S++ +C    ++  G  +  +  K 
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ----SNDPITA 329
           G E NL V N+ + +Y + G    A+R+F+QM +  +++WN++I+ Y Q    + D + A
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 330 --HGF-----FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
              GF     F  ++++ ++PDL T  S+ S+ + +        +H   ++ G F+ DV+
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSG-FLSDVV 389

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + +A+V+MY K G I  A   F  +P +  ++W ++I+GY+Q+G   EAI++F+ M    
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRID 500
            + PN+ T+VS+L A S+ G + +  + +  ++K   C +  V    C++DM+ + GR++
Sbjct: 450 -VRPNEITFVSLLSACSYAGLVEEA-EHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVE 507

Query: 501 DAMSLFYQVPRSSSVP----WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSL 555
           DA S    + R+   P    W+++++    HG  + A     ++L+  ++P  I T++ L
Sbjct: 508 DAFSF---IKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILL 562

Query: 556 LTACSHSGLVSEGQRYFHMM-QEEFGI 581
           L     +    +  R   +M QE+ GI
Sbjct: 563 LNMYISTERWQDVARVRKLMKQEDVGI 589



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 196/417 (47%), Gaps = 31/417 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H   +  G          L + YA LG L  +   F  I  +NV TW +MIS    C
Sbjct: 159 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA---C 215

Query: 124 GRLSEAVD---CFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD 177
               E V+     +   L  G+ P+ +T   V+  C   +D   GK++     K+G E +
Sbjct: 216 AEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETN 275

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ-----------SGNAV 226
           + V  S +++Y R G  + A +LF+ M      +WNAMISGY Q                
Sbjct: 276 LPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF 335

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +AL I  +++   +  D  T +SIL VC+    +  G  IH   +K G   ++ V++ L+
Sbjct: 336 QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALV 395

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           NMY K G ++ A + F +M  R  V+W S+I+ Y Q   P  A   F  M+ AG++P+ +
Sbjct: 396 NMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI 455

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGF-IMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVF 404
           T VSL S  +       +   H F +M++ + +E V+     ++DM+ +LG +  A +  
Sbjct: 456 TFVSLLSACSYAGLVEEAE--HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFI 513

Query: 405 E--GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ-GTYVSILPAY 458
           +  G    + I W++L+ G   +G    A   F   ++  E+ P    TY+ +L  Y
Sbjct: 514 KRTGFEPNEAI-WSSLVAGCRSHGNMELA---FYAADKLLELKPKGIETYILLLNMY 566



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 20/206 (9%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +   C+    L   +++HA  + SG +  V  ++ LVN Y   G +  +   F  + 
Sbjct: 356 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 415

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKK 164
            R   TW SMIS Y + G+  EA+  F +  L +G+RP+  TF  +L AC    LV+  +
Sbjct: 416 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL-AGVRPNEITFVSLLSACSYAGLVEEAE 474

Query: 165 IHCSVLKLGFEWDVFVA--ASLLHMYCRFG-----LANVARKLFDDMPVRDSGSWNAMIS 217
            +  ++K  +  +  V     ++ M+ R G      + + R  F+     +   W+++++
Sbjct: 475 HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP----NEAIWSSLVA 530

Query: 218 GYCQSGN---AVEALDILDEMRLEGV 240
           G    GN   A  A D L E++ +G+
Sbjct: 531 GCRSHGNMELAFYAADKLLELKPKGI 556


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/645 (36%), Positives = 383/645 (59%), Gaps = 7/645 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H ++   G    VF    L+ FY N G L   +  FD +  R+V +WNS+I V+   
Sbjct: 27  REIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVH 86

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLKLGFEWDVFV 180
           G  +EA+  F +  L SG RP+  +   VL  C  L DG   ++IHC V+K G +  V V
Sbjct: 87  GFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTV 146

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ +Y + G    +R++FD++  R+  SWNA+I+         +AL++   M   GV
Sbjct: 147 GNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGV 206

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + +T +S+LPV         G  IH + ++ GLE ++FV+N LI+MYAK G    A  
Sbjct: 207 KPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASN 266

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+Q+ E+++VSWN+++A + Q+   + A      MQ  G  P+ +T  ++    A++  
Sbjct: 267 VFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGF 326

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R  + +H   +R G  + D+ + NA+ DMYAK G +N A  VF+ + ++D +S+N LI 
Sbjct: 327 LRPGKEIHARAIRTGSSV-DLFVSNALTDMYAKCGCLNLARRVFK-ISLRDEVSYNILII 384

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GY+Q    SE++ +F  M     +  +  +Y+ ++ A +++ AL+QG ++H   ++  L 
Sbjct: 385 GYSQTTNCSESLRLFLEMG-IKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLH 443

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             +F+A  L+D Y KCGRID A  +F Q+P   +  WN++I  +G+ G+   A+N F  M
Sbjct: 444 THLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAM 503

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            ++GV  D ++++++L+ACSH GLV EG++YF  MQ +  IKP   HY CMVDL GRAG 
Sbjct: 504 KEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGL 562

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           +  A   I+++P+ PDA++WGALLGACRIHG +EL   A++ LF++  ++ GYY ++SN+
Sbjct: 563 IEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNM 622

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           YA  GKW+  ++VR L + RG KK PG S ++++N+V  F  G R
Sbjct: 623 YAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/527 (32%), Positives = 296/527 (56%), Gaps = 17/527 (3%)

Query: 141 GLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G+R D +TFP VLKAC +   +  G++IH  V KLGF+ DVFV  +LL  Y   G     
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCAR 256
           +++FD+M  RD  SWN++I  +   G   EA+ +  EM L  G   + +++ S+LPVCA 
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
            ++ ++G  IH Y+VK GL+  + V N L+++Y K G ++ + RVFD++ ER+ VSWN+I
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 317 I---AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           I   A  E++ D +     F  M   G++P+ +T  S+  ++ +L      + +HGF +R
Sbjct: 182 ITSLAYLERNQDALE---MFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G    D+ + NA++DMYAK G    A  VF  +  K+++SWN ++  +AQN L   A++
Sbjct: 239 FG-LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVD 297

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           + + M+   EI PN  T+ ++LPA + +G LR G +IHAR I+     D+FV+  L DMY
Sbjct: 298 LVRQMQADGEI-PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMY 356

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG ++ A  +F ++     V +N +I  +       ++L  F +M  +G++ D ++++
Sbjct: 357 AKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYM 415

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +++AC++   + +G+   H +     +  HL     ++D + + G + +A    + +P 
Sbjct: 416 GVISACANLAALKQGKE-VHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPS 474

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMS 658
           R  AS W +++    + G + +     + + E  V+ ++V Y  ++S
Sbjct: 475 RDTAS-WNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLS 520


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/670 (37%), Positives = 382/670 (57%), Gaps = 6/670 (0%)

Query: 155 ACRNLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
           A R+   G+  H   L+L       F+ A L+++Y +  L   A       P     S+ 
Sbjct: 29  ATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYT 88

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVK 272
           A ISG  Q    ++AL     M   G+  +  T  S     A +    + G  +H   ++
Sbjct: 89  AFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALR 148

Query: 273 HG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
            G L  + FVS   ++MY K G +  A R+FD+M  R+VV+WN+++        P+    
Sbjct: 149 FGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVE 208

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            +  ++ AG  P+++++ +  +  A + +       +GF+ + G F +DV + N+VVD Y
Sbjct: 209 AYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCG-FGKDVSVSNSVVDFY 267

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
            K   +  A AVF+G+ V++ +SW +++  YAQNG   EA  V+       E  P     
Sbjct: 268 GKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGE-EPTDFMV 326

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            S+L   + +  L  G  +HA  +++C+  ++FVA+ LVDMYGKCG I+DA  +F+++P+
Sbjct: 327 SSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQ 386

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQM-LDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
            + V WNA+I  +   G    AL+ F +M + +   P++IT V++LTACS  GL  EG  
Sbjct: 387 RNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYE 446

Query: 571 YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
            F  M+  FGI+P ++HY C+VDL  RAG    A+  IQ MP+RP  S+WGALLG C++H
Sbjct: 447 LFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMH 506

Query: 631 GNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSS 690
           G  ELG +A+++LFE+D ++ G +VL+SN+ A+ G+W    +VR   ++ G+KK PG S 
Sbjct: 507 GKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSW 566

Query: 691 IEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILT 750
           I   N V +F   + TH    +I   L  L  +M++ GY+PD  + L D+EE+EKE  + 
Sbjct: 567 ITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVF 626

Query: 751 SHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFK 810
            HSE+LA+AFG+I  PP  PI+I KNLR+C DCH   KFIS I  REIIVRD+N FHHFK
Sbjct: 627 QHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFK 686

Query: 811 DGICSCGDYW 820
           +  CSC DYW
Sbjct: 687 NYECSCKDYW 696



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 231/482 (47%), Gaps = 12/482 (2%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
            +L       AL ++S  +   F    LVN Y+ L     +  +        V ++ + I
Sbjct: 33  ARLGRAAHARALRLLSPALPP-FLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFI 91

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK----ACRNLVDGKKIHCSVLKLG 173
           S   +  R  +A+  F    L  GLRP+ +TFP   K    A      G ++H   L+ G
Sbjct: 92  SGAAQHARPLQALSAFAAM-LRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFG 150

Query: 174 F-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           +   D FV+ + L MY + G   +AR+LFD+MP R+  +WNA+++     G  +E ++  
Sbjct: 151 YLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAY 210

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             +R  G   + ++V +    CA   N+  G   + ++ K G   ++ VSN++++ Y K 
Sbjct: 211 FGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKC 270

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  A  VFD M  R+ VSW S++ AY Q+     A   +   ++AG +P    + S+ 
Sbjct: 271 RCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVL 330

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           +  A L      R++H  +  R     ++ + +A+VDMY K G I  A  VF  +P +++
Sbjct: 331 TTCAGLLGLDLGRALHA-VAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNL 389

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++WN +I GYA  G A  A+ VF  M    E  PN  T V++L A S  G  ++G ++  
Sbjct: 390 VTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELF- 448

Query: 473 RVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
           + +K     +  +    C+VD+  + G  + A  +   +P   S+  W A++    +HG+
Sbjct: 449 QTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGK 508

Query: 530 GD 531
            +
Sbjct: 509 TE 510



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 12/277 (4%)

Query: 53  LFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
            F +C   T L   ++ +  +   G  K V  S  +V+FY     +  +R  FD +  RN
Sbjct: 228 FFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRN 287

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
             +W SM+  Y + G   EA    Y     +G  P  +    VL  C  L+    G+ +H
Sbjct: 288 NVSWCSMVVAYAQNGAEEEAF-FVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALH 346

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              ++   + ++FVA++L+ MY + G    A ++F +MP R+  +WNAMI GY   G+A 
Sbjct: 347 AVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAH 406

Query: 227 EALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSN 283
            AL + D+M + G    P  IT+ ++L  C+R      G  L      + G+E  +    
Sbjct: 407 NALSVFDKM-IMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYA 465

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVS-WNSIIAA 319
            ++++  + GM   A ++   M  R  +S W +++  
Sbjct: 466 CVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGG 502



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 9/186 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LHA+ V S     +F ++ LV+ Y   G +  +   F  +  RN+ TWN+MI  Y   
Sbjct: 343 RALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAHI 402

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSV-LKLGFEWDVF 179
           G    A+  F +  +     P++ T   VL AC       +G ++  ++  + G E  + 
Sbjct: 403 GDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRIE 462

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALDILDEMRLE 238
             A ++ + CR G+   A K+   MP+R S S W A++ G C+     E   I  E   E
Sbjct: 463 HYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGG-CKMHGKTELGRIAAEKLFE 521

Query: 239 GVSMDP 244
              +DP
Sbjct: 522 ---LDP 524


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 248/688 (36%), Positives = 407/688 (59%), Gaps = 9/688 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + + CT L++V   K +  +++  G    +F ++ L+  YA+ G +  +R  FD + 
Sbjct: 13  FPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMI 72

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK-ACRN-LVD-GK 163
            ++   WN MI+ YV+CG    A+  F    ++S  +PD  TF  VL  +C   +V+ G+
Sbjct: 73  DKDCVLWNVMINGYVQCGESDSAIKLFKDM-MSSEAKPDSVTFACVLSISCSEAMVEYGR 131

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V++ G ++   V  +L+ +Y +      ARKLFD MP  D   WN MI GY Q+G
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +A  + +EM   G+  D IT  S LP  A S ++     IH YIV+HG+  ++++++
Sbjct: 192 FMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNS 251

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI++Y K      A ++F+   + D+V + ++I+ Y  +     A   F  + Q  + P
Sbjct: 252 ALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIP 311

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + LT  S+    A L   +  R +HG+I++     E   +G+A+++MYAK G ++ A  +
Sbjct: 312 NALTFSSILPACAGLAAIKLGRELHGYIIKNE-LEEKCPVGSAIMNMYAKCGRLDLAHLI 370

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  + +KD I WN++IT ++Q+G   EAI +F+ M     +  +  T  + L A +++ A
Sbjct: 371 FGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMG-MEGVKYDCVTVSAALSACANIPA 429

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G +IH  +IK     D+F  + L++MY KCG+++ A  +F  +   + V WN+II+ 
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAA 489

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +G HG    +L  F  ML+EG++PDHITF+++L++C H+G V +G RYF  M EE+GI  
Sbjct: 490 YGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPA 549

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            ++HY CM DLFGRAGHL  A   I +MP  P AS+WG LLGACR+HGN+EL  VAS  L
Sbjct: 550 QMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYL 609

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            +++ +N GYY+L++++ A+ GKW  V +++ L ++RG++K PG S IEVNN   +F+  
Sbjct: 610 LDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAA 669

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           + +HP+  +IY  L++L  +++ +GYVP
Sbjct: 670 DGSHPESPQIYSLLKSLLLELRKVGYVP 697



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 165/551 (29%), Positives = 294/551 (53%), Gaps = 11/551 (1%)

Query: 138 LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           L  G+ PD YTFPPV+K C  L +   GK I   +L++GF+ D+FVA+SL+ +Y   G  
Sbjct: 2   LGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCI 61

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR+ FD M  +D   WN MI+GY Q G +  A+ +  +M       D +T A +L + 
Sbjct: 62  EDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSIS 121

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
                +  G  +H  +V+ GL+F   V N L+ +Y+K   +  A ++FD M + D+V WN
Sbjct: 122 CSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWN 181

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
            +I  Y Q+     A   F  M  AGI+PD +T  S    +A+ +  +  + +HG+I+R 
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G  + DV + +A++D+Y K      AC +F      D++ +  +I+GY  NG+  +A+E+
Sbjct: 242 GVIL-DVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           F+ + +  ++ PN  T+ SILPA + + A++ G ++H  +IKN L     V + +++MY 
Sbjct: 301 FRWLLQ-KKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYA 359

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
           KCGR+D A  +F ++    ++ WN+II+     G+ ++A+  FRQM  EGV+ D +T  +
Sbjct: 360 KCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSA 419

Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
            L+AC++   +  G+   H    +   +  L     +++++ + G L +A   + N+   
Sbjct: 420 ALSACANIPALHYGKE-IHGFMIKGAFESDLFDMSALINMYAKCGKLNIAR-LVFNLMQE 477

Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKWE-GVD 671
            +   W +++ A   HG +         + E  +  +++ +  ++S+   + G+ E GV 
Sbjct: 478 KNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSC-GHAGQVEDGVR 536

Query: 672 EVRSLARDRGL 682
             R +  + G+
Sbjct: 537 YFRCMTEEYGI 547



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 4/296 (1%)

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M   G+ PD  T   +      LN+ R  + +   I+  G F  D+ + ++++ +YA  G
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMG-FDLDMFVASSLIKLYADNG 59

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            I  A   F+ +  KD + WN +I GY Q G +  AI++F+ M   +E  P+  T+  +L
Sbjct: 60  CIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMS-SEAKPDSVTFACVL 118

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
                   +  G ++H  V+++ L F   V   LV +Y K  ++ DA  LF  +P+   V
Sbjct: 119 SISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLV 178

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WN +I  +  +G  D A   F +M+  G++PD ITF S L + + S  + + +   H  
Sbjct: 179 VWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKE-IHGY 237

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               G+   +     ++DL+ +     MA     N+  + D  I+ A++    ++G
Sbjct: 238 IVRHGVILDVYLNSALIDLYFKCRDAVMACKMF-NLSTKFDIVIYTAMISGYVLNG 292


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/559 (42%), Positives = 333/559 (59%), Gaps = 35/559 (6%)

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G + +A  VF+Q+      + NSII  Y   N P  A  F+  M   G+ PD  T  SL 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                L +    + +H    + G F  D  I N +++MY+  G + SA  VF+ +  K V
Sbjct: 86  KSCGVLCE---GKQLHCHSTKLG-FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMME-------------------------------EC 441
           +SW T+I  YAQ  L  EAI++F+ ME                               + 
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           + +  ++ T  S+L A +H+GAL  G  +H  + K  +  DV + T LVDMY KCG I+ 
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 261

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           AM +F ++P    + W A+I    + GQG KAL  F +M    V+PD ITFV +L ACSH
Sbjct: 262 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSH 321

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +GLV+EG  YF+ M  ++GI+P ++HYGCMVD+ GRAG +  A + IQNMP+ PD  +  
Sbjct: 322 AGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLV 381

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
            LL ACRIHGN+ +   A+ +L E+D +N G YVL+SNIY+++  WE   ++R L  +R 
Sbjct: 382 GLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERN 441

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +KK PG S+IEV   V  F  G+ +HP+  +IY+ L ++  ++KS GYVPDKS VL D++
Sbjct: 442 IKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMD 501

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E EKE+ L+ HSE+LAIAFG++S+ P +PI++ KNLRVC DCH+  KFIS++  REIIVR
Sbjct: 502 EKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVR 561

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D NRFHHF  G CSC D+W
Sbjct: 562 DRNRFHHFTKGSCSCRDFW 580



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 199/425 (46%), Gaps = 58/425 (13%)

Query: 80  FSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           FS++K+V F A  + G L ++R  F+ I     +T NS+I  Y       +A+  FYQ  
Sbjct: 11  FSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLM 69

Query: 138 LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           +  GL PD +TFP + K+C  L +GK++HC   KLGF  D ++  +L++MY   G    A
Sbjct: 70  MLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSA 129

Query: 198 RKLFDDMPVRDSGSW--------------------------------NAMISGYCQSGNA 225
           RK+FD M  +   SW                                N MI+G+ +  + 
Sbjct: 130 RKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDY 189

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EAL + +EM+L GV  D +T+AS+L  C     +  G  +H+YI K  +E ++ +   L
Sbjct: 190 EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTAL 249

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MYAK G +  A+RVF +M E+DV++W ++I         + A   F  MQ + ++PD 
Sbjct: 250 VDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDA 309

Query: 346 LTLVSLTSI----------VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           +T V + +           +A  N   N   +   I   G           +VDM  + G
Sbjct: 310 ITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYG----------CMVDMLGRAG 359

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSI 454
            I  A  + + +P+     +  L+   +   +    +   +  ++  E++P N GTYV +
Sbjct: 360 RIAEAEDLIQNMPMAP--DYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLL 417

Query: 455 LPAYS 459
              YS
Sbjct: 418 SNIYS 422



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 35/291 (12%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  LF+SC  L   K+LH      G     +    L+N Y+N G L  +R  FD +  ++
Sbjct: 81  FPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 140

Query: 110 VYTWNSMISVYVRCGRLSEAVDCF------------------------YQFTLT------ 139
           V +W +MI  Y +     EA+  F                        Y+  L+      
Sbjct: 141 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQ 200

Query: 140 -SGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
            SG++ D  T   +L AC +L     GK +H  + K   E DV +  +L+ MY + G   
Sbjct: 201 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            A ++F +MP +D  +W A+I G    G  ++AL++  EM++  V  D IT   +L  C+
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320

Query: 256 RSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            +  +  G+   +    K+G++ ++     +++M  + G +  A  +   M
Sbjct: 321 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 371



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 8/167 (4%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           ++    L  +CT L  +   K LH  +        V   T LV+ YA  G +  +   F 
Sbjct: 208 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 267

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD 161
            +  ++V TW ++I     CG+  +A++ F++  + S ++PD  TF  VL AC +  LV+
Sbjct: 268 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM-SEVKPDAITFVGVLAACSHAGLVN 326

Query: 162 GKKIHCSVL--KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
               + + +  K G +  +     ++ M  R G    A  L  +MP+
Sbjct: 327 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 373


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/784 (32%), Positives = 410/784 (52%), Gaps = 82/784 (10%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNF 88
           +S Q +P      +++  F  +FQ C+    +   K+ HA ++++    TVF +  L+  
Sbjct: 33  SSYQATP------TKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQM 86

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-------- 140
           Y    DL F+   FD +  R+  +WN+M+  Y   G +  A   F     T         
Sbjct: 87  YIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFD 146

Query: 141 ------GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCR- 190
                 G   D  TF  VLK+C +L D   G +IH   +K+GF+ DV   ++LL MY + 
Sbjct: 147 FRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 206

Query: 191 -----------------------------------FG------------------LANVA 197
                                              FG                  L++ +
Sbjct: 207 CVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCS 266

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            +LF+ +P  +  S+NA+I GY +S   +EAL +   ++  G+ +D ++++     CA  
Sbjct: 267 NQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVI 326

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
              L GL +H   +K   + N+ V+N +++MY K G +  A  VF++M+ RD VSWN+II
Sbjct: 327 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 386

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           AA+EQ+ +       F  M Q+G++PD  T  S+    A          +H  I++    
Sbjct: 387 AAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMG 446

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           + D  +G A++DMY+K G++  A  + + L  + V+SWN +I+G++    + EA + F  
Sbjct: 447 L-DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK 505

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 497
           M E   ++P+  TY +IL   +++  +  G +IHA++IK  L  D ++++ LVDMY KCG
Sbjct: 506 MLEMG-VDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCG 564

Query: 498 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
            + D   +F + P    V WNA++  +  HG G++AL  F  M  E V+P+H TF+++L 
Sbjct: 565 NMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLR 624

Query: 558 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 617
           AC H GLV +G  YFH M   +G+ P L+HY C+VD+ GR+G +  A   I+ MP   DA
Sbjct: 625 ACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADA 684

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 677
            IW  LL  C+IHGN+E+   A+  + +++ E+   YVL+SNIYAN G W  V ++R + 
Sbjct: 685 VIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMM 744

Query: 678 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
           R  GLKK PG S IE+ ++V  F  G++ HP+ ++IY+ L  LT +MK +GY+PD  F+L
Sbjct: 745 RFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFIL 804

Query: 738 QDVE 741
            D E
Sbjct: 805 NDDE 808


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/769 (33%), Positives = 405/769 (52%), Gaps = 41/769 (5%)

Query: 64  KRLHALLVVSGKIKTV--FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           + +H  +V  G +  +  F +  L+N Y  LG L+ +R  FD +  RN+ ++ +++  + 
Sbjct: 79  RAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHA 138

Query: 122 RCGRLSEAVDCFY----------QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
           + G    A   F           QF LT+ L+        +      L  G  +H    K
Sbjct: 139 QRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL------AIAMDAAGLAGG--VHSCAWK 190

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           LG + + FV + L+  Y    L + A  +F+ +  +D+  W AM+S Y ++     A   
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRC 250

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
                L  +S            CAR         IH   +K   +    V   L++MYAK
Sbjct: 251 AQSCSLLAIS------------CARQG-------IHGCAIKTLNDTEPHVGGALLDMYAK 291

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G ++ A   F+ +   DV+  + +I+ Y QSN    A   F  + ++ + P+  +L S+
Sbjct: 292 CGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSV 351

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
                 +      + +H   ++ G    D+ +GNA++D YAK   ++S+  +F  L   +
Sbjct: 352 LQACTNMVQLDFGKQIHNHAIKIG-HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDAN 410

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWNT++ G++Q+GL  EA+ VF  M+   ++   Q TY S+L A +   ++R   +IH
Sbjct: 411 EVSWNTIVVGFSQSGLGEEALSVFCEMQAA-QMPCTQVTYSSVLRACASTASIRHAGQIH 469

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
             + K+    D  +   L+D Y KCG I DA+ +F  +     + WNAIIS + +HGQ  
Sbjct: 470 CSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAA 529

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
            AL  F +M    V  + ITFV+LL+ C  +GLV+ G   F  M+ + GIKP ++HY C+
Sbjct: 530 DALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCI 589

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           V L GRAG L  A  FI ++P  P A +W ALL +C IH N+ LG  +++++ E++ ++ 
Sbjct: 590 VRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDE 649

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
             YVL+SN+YA  G  + V  +R   R+ G++K PG S +E+  ++  F  G+  HP   
Sbjct: 650 TTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMR 709

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            I   L  L  K    GY+PD + VL DV++++K  +L  HSERLA+A+G++ +PP  PI
Sbjct: 710 VINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPI 769

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I KNLR C DCH     IS+I +REIIVRD NRFHHF+DG CSCGDYW
Sbjct: 770 RILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 253/531 (47%), Gaps = 33/531 (6%)

Query: 162 GKKIHCSVLKLGF--EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           G+ +H  V++ G     D+F A  LL+MY + G    AR+LFD MP R+  S+  ++  +
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q G+   A  +   +R EG  ++   + ++L +    D       +H    K G + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           FV + LI+ Y+   ++  A  VF+ ++ +D V W ++++ Y +++ P  A   F   Q  
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA---FRCAQSC 254

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI--IGNAVVDMYAKLGII 397
                     SL +I          + +HG  ++    + D    +G A++DMYAK G I
Sbjct: 255 ----------SLLAISCA------RQGIHGCAIKT---LNDTEPHVGGALLDMYAKCGDI 295

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             A   FE +P  DVI  + +I+ YAQ+    +A E+F  +   + + PN+ +  S+L A
Sbjct: 296 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR-SSVLPNEYSLSSVLQA 354

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            +++  L  G +IH   IK     D+FV   L+D Y KC  +D ++ +F  +  ++ V W
Sbjct: 355 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSW 414

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE-GQRYFHMMQ 576
           N I+      G G++AL+ F +M    +    +T+ S+L AC+ +  +   GQ +  + +
Sbjct: 415 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 474

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
             F     + +   ++D + + G++  A    Q++  R D   W A++    +HG     
Sbjct: 475 STFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHLMER-DIISWNAIISGYALHGQAADA 531

Query: 637 AVASDRLFE--VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
               DR+ +  V+S ++ +  L+S   +      G+    S+  D G+K +
Sbjct: 532 LELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPS 582



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 163/358 (45%), Gaps = 37/358 (10%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGL--EFNLFVSNNLINMYAKFGMMRHAL 299
           +D    A  L  C    +   G  +H ++V+ G     +LF +N L+NMY K G +  A 
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           R+FD+M ER++VS+ +++ A+ Q  D   A   F  ++  G + +   L ++  +   ++
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
               +  VH    + G    +  +G+ ++D Y+   +++ A  VF G+  KD + W  ++
Sbjct: 177 AAGLAGGVHSCAWKLG-HDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y++N     A   F+  + C           S+L     +   RQG  IH   IK   
Sbjct: 236 SCYSENDCPENA---FRCAQSC-----------SLLA----ISCARQG--IHGCAIKTLN 275

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             +  V   L+DMY KCG I DA   F  +P    +  + +IS +    Q ++A   F +
Sbjct: 276 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 335

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG--IKPHLKHYGCMVDLF 595
           ++   V P+  +  S+L AC+            +M+Q +FG  I  H    G   DLF
Sbjct: 336 LMRSSVLPNEYSLSSVLQACT------------NMVQLDFGKQIHNHAIKIGHESDLF 381



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 149/319 (46%), Gaps = 12/319 (3%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     + Q+CT +  +   K++H   +  G    +F    L++FYA   D+  S   F 
Sbjct: 345 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFS 404

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +   N  +WN+++  + + G   EA+  F +    + +     T+  VL+AC +     
Sbjct: 405 SLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQ-AAQMPCTQVTYSSVLRACASTASIR 463

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
              +IHCS+ K  F  D  +  SL+  Y + G    A K+F  +  RD  SWNA+ISGY 
Sbjct: 464 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 523

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNL 279
             G A +AL++ D M    V  + IT  ++L VC  +  +  GL L     + HG++ ++
Sbjct: 524 LHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583

Query: 280 FVSNNLINMYAKFGMMRHALR-VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
                ++ +  + G +  AL+ + D       + W +++++     +   A G F+  + 
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKN--VALGRFSAEKI 641

Query: 339 AGIQP-DLLTLVSLTSIVA 356
             I+P D  T V L+++ A
Sbjct: 642 LEIEPQDETTYVLLSNMYA 660


>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
           [Vitis vinifera]
          Length = 603

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/564 (40%), Positives = 343/564 (60%), Gaps = 11/564 (1%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKF--GMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           IH +I+ +G + N  +S  L+N  A    G + +A  VF ++      +WNS+I  + QS
Sbjct: 42  IHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQS 101

Query: 324 NDPITAHG--FFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             P+      F+  M  A   +PD  T   L     +  +    R VHGFI+R G + +D
Sbjct: 102 PSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFG-YDQD 160

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           V++   ++  YA  G+I +A  VFE +P +D++SWN++I+ Y Q GL  EA++++  M  
Sbjct: 161 VVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRI 220

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
            N +  +  T VS+L + +HVGAL  G+++H    +  L  ++FV   L+DMY KCG + 
Sbjct: 221 SN-VGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLA 279

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A+S+F  +P+     WN++I  +G+HG+GD+A+ FF  ML  GVRP+ ITF+ LL  CS
Sbjct: 280 SALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCS 339

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H GLV EG +YFHMM  EF +KP +KHYGCMVDLFGRAG L  A   I++ P + D  +W
Sbjct: 340 HQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLW 399

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
             LLG+C+IH N+E+G +A   L ++ S   G  VL+S IYA     +GV  +R L + R
Sbjct: 400 RTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSR 459

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+K TPGWS IEV ++V  F   +++HP   +IY +L  +  +   +GY  ++S ++   
Sbjct: 460 GIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLVAAP 519

Query: 741 EEDEKEHILTS----HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           E + +E+   +    HSE+LAIA+G+  +P  + + I KNLRVC DCHN+TKF+S   +R
Sbjct: 520 ESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSMAFDR 579

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           EIIVRD  RFHHFK G CSC ++W
Sbjct: 580 EIIVRDRVRFHHFKGGHCSCKEFW 603



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 192/378 (50%), Gaps = 12/378 (3%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRN 109
            L Q C  +  + ++HA ++++G       S KL+NF A    G L++++  F  I    
Sbjct: 28  SLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQ 87

Query: 110 VYTWNSMISVYVRC-GRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNLVDGKK--- 164
              WNSMI  + +    L      FY   L+ S  RPD YTF  +LKAC    +  K   
Sbjct: 88  TPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCRE 147

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H  +++ G++ DV +  +L+  Y   GL   A K+F++MP RD  SWN+MIS YCQ+G 
Sbjct: 148 VHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGL 207

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EAL + D+MR+  V  D  T+ S+L  CA    +  G+ +H +  +  L  N+FV N 
Sbjct: 208 HEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNA 267

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI+MYAK G +  AL +F+ M +RDV +WNS+I  Y        A  FF +M  AG++P+
Sbjct: 268 LIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPN 327

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKLGIINSACA 402
            +T + L    +     +    V  F M    F     I +   +VD++ + G +  A  
Sbjct: 328 SITFLGLLCGCSHQGLVKE--GVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALE 385

Query: 403 VFEGLPVK-DVISWNTLI 419
           V    P + D + W TL+
Sbjct: 386 VIRSSPSQHDPVLWRTLL 403


>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/564 (40%), Positives = 343/564 (60%), Gaps = 11/564 (1%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKF--GMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           IH +I+ +G + N  +S  L+N  A    G + +A  VF ++      +WNS+I  + QS
Sbjct: 24  IHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQS 83

Query: 324 NDPITAHG--FFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             P+      F+  M  A   +PD  T   L     +  +    R VHGFI+R G + +D
Sbjct: 84  PSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFG-YDQD 142

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           V++   ++  YA  G+I +A  VFE +P +D++SWN++I+ Y Q GL  EA++++  M  
Sbjct: 143 VVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRI 202

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
            N +  +  T VS+L + +HVGAL  G+++H    +  L  ++FV   L+DMY KCG + 
Sbjct: 203 SN-VGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLA 261

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
            A+S+F  +P+     WN++I  +G+HG+GD+A+ FF  ML  GVRP+ ITF+ LL  CS
Sbjct: 262 SALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCS 321

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H GLV EG +YFHMM  EF +KP +KHYGCMVDLFGRAG L  A   I++ P + D  +W
Sbjct: 322 HQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLW 381

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
             LLG+C+IH N+E+G +A   L ++ S   G  VL+S IYA     +GV  +R L + R
Sbjct: 382 RTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSR 441

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+K TPGWS IEV ++V  F   +++HP   +IY +L  +  +   +GY  ++S ++   
Sbjct: 442 GIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLVAAP 501

Query: 741 EEDEKEHILTS----HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           E + +E+   +    HSE+LAIA+G+  +P  + + I KNLRVC DCHN+TKF+S   +R
Sbjct: 502 ESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSMAFDR 561

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           EIIVRD  RFHHFK G CSC ++W
Sbjct: 562 EIIVRDRVRFHHFKGGHCSCKEFW 585



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 192/378 (50%), Gaps = 12/378 (3%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRN 109
            L Q C  +  + ++HA ++++G       S KL+NF A    G L++++  F  I    
Sbjct: 10  SLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQ 69

Query: 110 VYTWNSMISVYVRC-GRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRNLVDGKK--- 164
              WNSMI  + +    L      FY   L+ S  RPD YTF  +LKAC    +  K   
Sbjct: 70  TPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCRE 129

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H  +++ G++ DV +  +L+  Y   GL   A K+F++MP RD  SWN+MIS YCQ+G 
Sbjct: 130 VHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGL 189

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
             EAL + D+MR+  V  D  T+ S+L  CA    +  G+ +H +  +  L  N+FV N 
Sbjct: 190 HEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNA 249

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI+MYAK G +  AL +F+ M +RDV +WNS+I  Y        A  FF +M  AG++P+
Sbjct: 250 LIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPN 309

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN--AVVDMYAKLGIINSACA 402
            +T + L    +     +    V  F M    F     I +   +VD++ + G +  A  
Sbjct: 310 SITFLGLLCGCSHQGLVKE--GVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALE 367

Query: 403 VFEGLPVK-DVISWNTLI 419
           V    P + D + W TL+
Sbjct: 368 VIRSSPSQHDPVLWRTLL 385


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/636 (37%), Positives = 360/636 (56%), Gaps = 4/636 (0%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY +      AR +    P R+  SW ++ISG  Q+G+   AL    EMR EGV  +  T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
                   A     ++G  IH   VK G   ++FV  +  +MY K  +   A ++FD++ 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ER++ +WN+ I+       P  A   F   ++    P+ +T  +  +  +          
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG ++R G F  DV + N ++D Y K   I S+  +F  +  K+ +SW +L+  Y QN 
Sbjct: 181 LHGLVLRSG-FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              E   V  +    + +  +     S+L A + +  L  G  IHA  +K C+   +FV 
Sbjct: 240 -EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV- 545
           + LVDMYGKCG I+D+   F ++P  + V  N++I  +   GQ D AL  F +M   G  
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 358

Query: 546 -RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
             P+++TFVSLL+ACS +G V  G + F  M+  +GI+P  +HY C+VD+ GRAG +  A
Sbjct: 359 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
           + FI+ MP++P  S+WGAL  ACR+HG  +LG +A++ LF++D ++ G +VL+SN +A  
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAA 478

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G+W   + VR   +  G+KK  G+S I V N+V  F   +R+H   ++I   L  L  +M
Sbjct: 479 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 538

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           ++ GY PD    L D+EE+EK   ++ HSE+LA+AFG++S P   PI+I KNLR+CGDCH
Sbjct: 539 EAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCH 598

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ KF+S   +REIIVRD+NRFH FKDGICSC DYW
Sbjct: 599 SFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 239/491 (48%), Gaps = 36/491 (7%)

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           Y+ L     +R        RNV +W S+IS   + G  S A+  F++     G+ P+ +T
Sbjct: 2   YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR-REGVVPNDFT 60

Query: 149 FPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           FP   KA  +L   V GK+IH   +K G   DVFV  S   MYC+  L + ARKLFD++P
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R+  +WNA IS     G   EA++   E R      + IT  + L  C+   ++  G+ 
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H  +++ G + ++ V N LI+ Y K   +R +  +F +M  ++ VSW S++AAY Q+++
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   +   ++  ++     + S+ S  A +      RS+H   + +      + +G+
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFVGS 299

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE--CNE 443
           A+VDMY K G I  +   F+ +P K++++ N+LI GYA  G    A+ +F+ M    C  
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT-----------CLVDM 492
             PN  T+VS+L A S  GA+  G+KI          FD   +T           C+VDM
Sbjct: 360 -TPNYMTFVSLLSACSRAGAVENGMKI----------FDSMRSTYGIEPGAEHYSCIVDM 408

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKAL----NFFRQMLDEGVRP 547
            G+ G ++ A     ++P   ++  W A+ +   +HG+    L    N F+  LD     
Sbjct: 409 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK--LDPKDSG 466

Query: 548 DHITFVSLLTA 558
           +H+   +   A
Sbjct: 467 NHVLLSNTFAA 477



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 9/362 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++HAL V  G+I  VF      + Y        +R  FD I  RN+ TWN+ IS  V  
Sbjct: 78  KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 137

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           GR  EA++ F +F    G  P+  TF   L AC + +    G ++H  VL+ GF+ DV V
Sbjct: 138 GRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 196

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
              L+  Y +      +  +F +M  +++ SW ++++ Y Q+    +A  +    R + V
Sbjct: 197 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 256

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                 ++S+L  CA    +  G  IH + VK  +E  +FV + L++MY K G +  + +
Sbjct: 257 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 316

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQL 358
            FD+M E+++V+ NS+I  Y        A   F  M  +  G  P+ +T VSL S  ++ 
Sbjct: 317 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 376

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKDVIS-WN 416
               N   +    MR  + +E      + +VDM  + G++  A    + +P++  IS W 
Sbjct: 377 GAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 435

Query: 417 TL 418
            L
Sbjct: 436 AL 437


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 396/689 (57%), Gaps = 11/689 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC  L  +   + +H      G    +F  + L+  YAN G L  +R  FD ++
Sbjct: 149 FPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA 208

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT---FPPVLKACRNLVDGK 163
            R+   WN M+  YV+ G +S AV+ F      SG  P+F T   F  V     +L  G 
Sbjct: 209 ERDCVLWNVMMDGYVKAGSVSSAVELFGDMR-ASGCEPNFATLACFLSVSATESDLFFGV 267

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K G E +V VA +L+ MY +    +   KLF  MP  D  +WN MISG  Q+G
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL +  +M+  G+  D +T+ S+LP     +    G  +H YIV++ +  ++F+ +
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+++Y K   +R A  V+D     DVV  +++I+ Y  +     A   F  + + GI+P
Sbjct: 388 ALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRP 447

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + + + S+    A +   +  + +H + ++   +     + +A++DMYAK G ++ +  +
Sbjct: 448 NAVAIASVLPACASMAAMKLGQELHSYALKNA-YEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVG 462
           F  +  KD ++WN++I+ +AQNG   EA+ +F+  E C E +  +  T  S+L A + + 
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFR--EMCMEGVKYSNVTISSVLSACASLP 564

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           A+  G +IH  VIK  +  D+F  + L+DMYGKCG ++ A  +F  +P  + V WN+II+
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G +G   ++++  R M +EG + DH+TF++L++AC+H+G V EG R F  M EE+ I 
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++H+ CMVDL+ RAG L  A   I +MP +PDA IWGALL ACR+H N+EL  +AS  
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LF++D  N GYYVLMSNI A  G+W+GV +VR L +D  ++K PG+S ++VNN   +F  
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +++HP  E IY  L+++  +++  GY+P
Sbjct: 805 ADKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 172/524 (32%), Positives = 293/524 (55%), Gaps = 10/524 (1%)

Query: 113 WNSMISVYVRCGRLSEAVDCFY--QFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHC 167
           WN +I      G    A+  FY   +   S   PD +TFP V+K+C  L     G+ +H 
Sbjct: 112 WNWLIRGLTMAGDYRSAL-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHR 170

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           +   LG + D+FV ++L+ MY   GL   AR++FD M  RD   WN M+ GY ++G+   
Sbjct: 171 TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSS 230

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A+++  +MR  G   +  T+A  L V A   ++  G+ +H   VK+GLE  + V+N L++
Sbjct: 231 AVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVS 290

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK   +    ++F  M   D+V+WN +I+   Q+     A   F  MQ++GI+PD +T
Sbjct: 291 MYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVT 350

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           LVSL   +  LN     + +HG+I+R    M DV + +A+VD+Y K   +  A +V++  
Sbjct: 351 LVSLLPALTDLNGFNQGKELHGYIVRNCVHM-DVFLVSALVDIYFKCRAVRMAQSVYDSS 409

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
              DV+  +T+I+GY  NG++ EA+++F+ + E   I PN     S+LPA + + A++ G
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE-QGIRPNAVAIASVLPACASMAAMKLG 468

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++H+  +KN      +V + L+DMY KCGR+D +  +F ++     V WN++IS    +
Sbjct: 469 QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQN 528

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G+ ++ALN FR+M  EGV+  ++T  S+L+AC+    +  G+   H +  +  I+  L  
Sbjct: 529 GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE-IHGVVIKGPIRADLFA 587

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
              ++D++G+ G+L  AH   ++MP + + S W +++ +   +G
Sbjct: 588 ESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYG 630



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 245/493 (49%), Gaps = 15/493 (3%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
           VL+ C    +L  G ++H   +  G    D  +   L+ MY        A  +F  +P  
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 208 DSG---SWNAMISGYCQSGNAVEALDILDEMRLEGVSM--DPITVASILPVCARSDNILS 262
            +     WN +I G   +G+   AL    +M     +   D  T   ++  CA    I  
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G L+H      GL+ ++FV + LI MYA  G++  A +VFD M ERD V WN ++  Y +
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
           +    +A   F  M+ +G +P+  TL    S+ A  +D      +H   ++ G    +V 
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG-LESEVA 283

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           + N +V MYAK   ++    +F  +P  D+++WN +I+G  QNG   +A+ +F  M++ +
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK-S 342

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            I P+  T VS+LPA + +    QG ++H  +++NC+  DVF+ + LVD+Y KC  +  A
Sbjct: 343 GIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMA 402

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
            S++        V  + +IS + ++G   +A+  FR +L++G+RP+ +   S+L AC+  
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462

Query: 563 GLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
             +  GQ  + + ++  +  + +++    ++D++ + G L ++H     +  + D   W 
Sbjct: 463 AAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAK-DEVTWN 519

Query: 622 ALLGACRIHGNME 634
           +++ +   +G  E
Sbjct: 520 SMISSFAQNGEPE 532


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/709 (34%), Positives = 396/709 (55%), Gaps = 17/709 (2%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           ++VSG    V  +  L+  + NLG +  +   FD +   +  +WN+MIS+Y   G  S+ 
Sbjct: 171 VIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK- 229

Query: 130 VDCFYQFTLTS--GLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASL 184
             CF  F+     GLRPD  T   ++  C +      G  IH   L+   +  V V  +L
Sbjct: 230 --CFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINAL 287

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           ++MY   G  + A  LF +M  RD  SWN MIS Y Q+ N+ +AL  L ++     S + 
Sbjct: 288 VNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNH 347

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +T +S L  C+    ++ G ++H  +++  L+ NL V N+LI MY K   M  A +VF  
Sbjct: 348 LTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQS 407

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN- 363
           M   D+VS+N +I  Y    D   A   F+ M+ AGI+P+ +T++++    A  ND  N 
Sbjct: 408 MPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNY 467

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R +H +I+R G F+ D  + N+++ MYAK G + S+  +F  +  K+++SWN +I    
Sbjct: 468 GRPLHAYIIRTG-FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANV 526

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q G   EA+++F  M+       ++      L + + + +L +G+++H   +K+ L  D 
Sbjct: 527 QLGHGEEALKLFIDMQHAGN-KLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDS 585

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP---WNAIISCHGIHGQGDKALNFFRQM 540
           +V    +DMYGKCG++D+ + +   VP  +  P   WN +IS +  +G   +A   F+QM
Sbjct: 586 YVVNAAMDMYGKCGKMDEMLQV---VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQM 642

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +  G +PD++TFV+LL+ACSH+GLV +G  Y++ M   FG+ P +KH  C+VDL GR G 
Sbjct: 643 VATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGR 702

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
              A  FI+ MPV P+  IW +LL + R H N+E+G   + +L E+D  +   YVL+SN+
Sbjct: 703 FAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNL 762

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA   +W  VD++RS  +   + K P  S +++ N+V  F  G+R H   EKIY +L  +
Sbjct: 763 YATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEM 822

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
             K++ +GY+ D S  L D +E++KE  L +HSE+LA+A+G+I  P  S
Sbjct: 823 LLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 871



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 280/570 (49%), Gaps = 9/570 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL   +G +  V+  T L++ Y + G +S ++  F  +  RNV +W +++      G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
           L EA+  + Q     G+  +   F  V+  C    N V G ++   V+  G +  V VA 
Sbjct: 126 LEEALRAYRQMR-RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVAN 184

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+ M+   G  + A KLFD M   D+ SWNAMIS Y   G   +   +  +MR  G+  
Sbjct: 185 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T+ S++ VCA SD+   G  IH   ++  L+ ++ V N L+NMY+  G +  A  +F
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
             M  RD++SWN++I++Y Q+ +   A      +      P+ LT  S     +      
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 364

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           + + VH  +++      ++++GN+++ MY K   +  A  VF+ +P  D++S+N LI GY
Sbjct: 365 DGKMVHAIVLQLS-LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGY 423

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ-GIKIHARVIKNCLCF 481
           A     ++A++VF  M     I PN  T ++I  +++    L   G  +HA +I+     
Sbjct: 424 AVLEDGTKAMQVFSWMRSAG-IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS 482

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D +VA  L+ MY KCG ++ + ++F  +   + V WNAII+ +   G G++AL  F  M 
Sbjct: 483 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQ 542

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             G + D +     L++C+    + EG +  H +  + G+          +D++G+ G +
Sbjct: 543 HAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 601

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                 + +  +RP    W  L+     +G
Sbjct: 602 DEMLQVVPDQAIRPQ-QCWNTLISGYAKYG 630



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 269/540 (49%), Gaps = 25/540 (4%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACR----- 157
           R   TW + +S  VRCGR   A      F +  G+R        +    ++ AC      
Sbjct: 4   RTPSTWYTAVSGCVRCGRDGTA------FEMLRGMRERGVPLSGFALASLVTACERRGRD 57

Query: 158 -NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
             +  G  IH    + G   +V++  +LLH+Y   G+ + A++LF +MP R+  SW A++
Sbjct: 58  EGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALM 117

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
                +G   EAL    +MR +GV  +    A+++ +C   +N + GL +   ++  GL+
Sbjct: 118 VALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 177

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + V+N+LI M+   G +  A ++FD+M E D +SWN++I+ Y            F+ M
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 237

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           +  G++PD  TL SL S+ A  +   +   +H   +R       V + NA+V+MY+  G 
Sbjct: 238 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSS-LDSSVTVINALVNMYSAAGK 296

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           ++ A  +F  +  +D+ISWNT+I+ Y QN  +++A++    +   NE +PN  T+ S L 
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE-SPNHLTFSSALG 355

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A S  GAL  G  +HA V++  L  ++ V   L+ MYGKC  ++DA  +F  +P    V 
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 415

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           +N +I  + +   G KA+  F  M   G++P++IT +++  + + S  +    R  H   
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYI 475

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
              G          ++ ++ + G+L  + N   ++  +   S W A++ A     N++LG
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS-WNAIIAA-----NVQLG 529



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 242/480 (50%), Gaps = 25/480 (5%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           H   +H+L + S    +V     LVN Y+  G LS +   F ++S R++ +WN+MIS YV
Sbjct: 264 HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYV 323

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDV 178
           +    ++A+    Q   T+   P+  TF   L AC +   L+DGK +H  VL+L  + ++
Sbjct: 324 QNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 382

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V  SL+ MY +      A K+F  MP  D  S+N +I GY    +  +A+ +   MR  
Sbjct: 383 LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA 442

Query: 239 GVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
           G+  + IT+ +I    A S+++ + G  +H YI++ G   + +V+N+LI MYAK G +  
Sbjct: 443 GIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLES 502

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           +  +F+ +  +++VSWN+IIAA  Q      A   F  MQ AG + D + L    S  A 
Sbjct: 503 STNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCAS 562

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L        +HG  M+ G    D  + NA +DMY K G ++    V     ++    WNT
Sbjct: 563 LASLEEGMQLHGLGMKSG-LDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNT 621

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV--- 474
           LI+GYA+ G   EA E F+ M       P+  T+V++L A SH G + +GI  +  +   
Sbjct: 622 LISGYAKYGYFKEAEETFKQMVATGR-KPDYVTFVALLSACSHAGLVDKGIDYYNSMASS 680

Query: 475 ------IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
                 IK+C+        C+VD+ G+ GR  +A     ++P   + + W +++S    H
Sbjct: 681 FGVSPGIKHCV--------CIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTH 732



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 201/426 (47%), Gaps = 7/426 (1%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC---ARSDNI 260
           M  R   +W   +SG  + G    A ++L  MR  GV +    +AS++  C    R + I
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  IH    + GL  N+++   L+++Y   G++  A R+F +M ER+VVSW +++ A 
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             +     A   +  M++ G+  +     ++ S+   L +      V   ++  G     
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSG-LQNQ 179

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           V + N+++ M+  LG ++ A  +F+ +   D ISWN +I+ Y+  G+ S+   VF  M  
Sbjct: 180 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 239

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
            + + P+  T  S++   +       G  IH+  +++ L   V V   LV+MY   G++ 
Sbjct: 240 -HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA  LF+ + R   + WN +IS +  +     AL    Q+      P+H+TF S L ACS
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
             G + +G +  H +  +  ++ +L     ++ ++G+   +  A    Q+MP   D   +
Sbjct: 359 SPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-DIVSY 416

Query: 621 GALLGA 626
             L+G 
Sbjct: 417 NVLIGG 422


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/639 (35%), Positives = 382/639 (59%), Gaps = 5/639 (0%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G++ HC V+K+G   D FV  SL+ MY + G  + A +++D M   D+ + N +IS Y +
Sbjct: 132 GRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYAR 191

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G  V+A  +  ++   G   +  T +++L VC     I  G  +H ++VK        V
Sbjct: 192 NGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAV 251

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N L+ +Y+K GMM  A  VF+ + +R+++SW + I  + Q  D   A   F+ M+++GI
Sbjct: 252 GNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGI 311

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P+  T   + +    + D  + R  H  ++++G     V +G A++DMY+ LG ++ A 
Sbjct: 312 EPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKG-MASGVFVGTAIIDMYSGLGEMDEAE 370

Query: 402 AVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYS 459
             F+ +      +SWN LI GY  N    +A+E F +M++E  ++  N+ TY +I  A S
Sbjct: 371 KQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKE--DVACNEFTYSNIFKACS 428

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
              +L   ++IH+R+IK+ +  ++ VA+ L++ Y +CG +++A+ +F Q+  +  V WN+
Sbjct: 429 SFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNS 488

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           II  +  +G   KA+   R+M++EG +P   TF+++L+ACSHSGLV EGQ +F  M +++
Sbjct: 489 IIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDY 548

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            I+P   H  CMVD+ GRAG L  A +FI+ + ++P ASIW  LL ACR + N+++    
Sbjct: 549 SIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYV 608

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
           ++++ +++  +   YV +SN+YA VG+W   +  R L   + + K PG S IEVNNK+  
Sbjct: 609 AEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYK 668

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F++ ++ HP+  K+Y++L+ L  +++ +GY P  + VL       KE ++  HSE+LA+ 
Sbjct: 669 FFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVC 728

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           FG++S PP  PI++ KNLRVC DC++  K+IS+IT+R I
Sbjct: 729 FGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767



 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 188/537 (35%), Positives = 298/537 (55%), Gaps = 33/537 (6%)

Query: 157  RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
            R L  G+ +H  ++ +G     + AA L+  Y   G  + ARKLFD +P  +   W  + 
Sbjct: 817  RALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLT 876

Query: 217  SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
                + G   EAL    EM+ EG+  +   + SIL  C    +  +G  +H  I+K+  E
Sbjct: 877  GACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFE 936

Query: 277  FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + ++ + LI MY+K G +  A RVFD ++++D+V  N++++ Y Q      A      M
Sbjct: 937  SDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKM 996

Query: 337  QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            QQAG++P++++  +L +  +Q+ D    +S+   + R       ++  N V         
Sbjct: 997  QQAGVKPNVVSWNTLIAGFSQVGD----KSMVSEVFR-------LMTANGVE-------- 1037

Query: 397  INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
                          DV+SW ++I+G+ QN    E  + F+ M +     P+  T  S+LP
Sbjct: 1038 -------------PDVVSWTSVISGFVQNFHNHEGFDAFKEMLD-QGFCPSSVTISSLLP 1083

Query: 457  AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
            A ++V  LR G +IH   +   +  DV+V + LVDMY KCG I +A  LFY +P  ++V 
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143

Query: 517  WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
            WN++I  +  HG  ++A+  F QM +   + DH+TF ++L ACSH+G+V  G+  F  MQ
Sbjct: 1144 WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQ 1203

Query: 577  EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
            E++ I+P L+HY CMVDL GRAG L  A++ I+ MPV PD  +WGALLGACR HGN+EL 
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263

Query: 637  AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
             VA++ LFE++ E+ G  +L+SN+YA+ G+W    +++ + + R   K PG S IE 
Sbjct: 1264 EVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIEA 1320



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 239/486 (49%), Gaps = 47/486 (9%)

Query: 52   DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
            D++     L+  + LHA LV+ G  +  + + KL++FY   G LS +R  FD I   N+ 
Sbjct: 811  DMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIR 870

Query: 112  TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
             W  +     R G   EA+  F +     GLRP+ +  P +LKAC +L D   G+ +H  
Sbjct: 871  RWIVLTGACARRGFYEEALSAFSEMQ-KEGLRPNQFVLPSILKACGHLSDRRTGENMHTV 929

Query: 169  VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            +LK  FE D ++ ++L++MY + G    A ++FD +  +D    NAM+SGY Q G   EA
Sbjct: 930  ILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEA 989

Query: 229  LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
            LB++ +M+  GV                  N++S                    N LI  
Sbjct: 990  LBLVQKMQQAGV----------------KPNVVSW-------------------NTLIAG 1014

Query: 289  YAKFGMMRHALRVFDQM----MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
            +++ G       VF  M    +E DVVSW S+I+ + Q+         F  M   G  P 
Sbjct: 1015 FSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPS 1074

Query: 345  LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
             +T+ SL      + + R+ + +HG+ M  G   +DV + +A+VDMYAK G I+ A  +F
Sbjct: 1075 SVTISSLLPACTNVANLRHGKEIHGYAMVIG-VEKDVYVRSALVDMYAKCGYISEAKILF 1133

Query: 405  EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
              +P ++ ++WN+LI GYA +G  +EAIE+F  MEE ++   +  T+ ++L A SH G +
Sbjct: 1134 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEE-SDTKLDHLTFTAVLNACSHAGMV 1192

Query: 465  RQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
              G  +  ++  K  +   +    C+VD+ G+ G++ +A  L   +P       W A++ 
Sbjct: 1193 ELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG 1252

Query: 523  CHGIHG 528
                HG
Sbjct: 1253 ACRNHG 1258



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 265/538 (49%), Gaps = 17/538 (3%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           + C +L   +R H  +V  G     F  T L++ YA  G++  +   +D ++  +  T N
Sbjct: 126 EGCVELG--RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCN 183

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLK 171
            +IS Y R G   +A   F Q     G RP+ YT+  +L  C  +    +GK++H  V+K
Sbjct: 184 CLISAYARNGFFVQAFQVFMQIG-NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVK 242

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
           + +  +  V  +LL +Y + G+   A  +F+ +  R+  SW A I+G+ Q G+  +AL  
Sbjct: 243 MQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQ 302

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
              MR  G+  +  T + +L  C    + + G + H  ++K G+   +FV   +I+MY+ 
Sbjct: 303 FSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSG 362

Query: 292 FGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
            G M  A + F QM      VSWN++IA Y  +     A   F  M +  +  +  T  +
Sbjct: 363 LGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSN 422

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +    +       +  +H  +++      ++ + +++++ Y + G + +A  VF  +   
Sbjct: 423 IFKACSSFPSLATTVQIHSRLIKSN-VESNLHVASSLIEAYTQCGSLENAVQVFTQISDA 481

Query: 411 DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           DV+SWN++I  Y+QNG   +AI +  +M+EE N+  P   T++++L A SH G +++G +
Sbjct: 482 DVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNK--PTSXTFLTVLSACSHSGLVQEGQE 539

Query: 470 IHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
               ++++  +  +    +C+VD+ G+ G++++A+    ++  + ++  W  +++    +
Sbjct: 540 FFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYN 599

Query: 528 GQGDKALNFFRQMLDEGVRP-DHITFVSLLTACSHSGLVSEGQRYFHMM-QEEFGIKP 583
                A     ++LD  + P D   +V+L    +  G  ++ +    +M Q+E   +P
Sbjct: 600 SNLQMAEYVAEKILD--LEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEP 655



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 207/390 (53%), Gaps = 11/390 (2%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V S L  C R   +  G   H ++VK GL  + FV  +LI+MYAK G +  A+RV+D+M 
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
             D  + N +I+AY ++   + A   F  +   G +P+  T  ++ ++   ++  +  + 
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQ 235

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +H  +++   ++ +  +GNA++ +Y+K G++  A  VFE L  +++ISW   I G+ Q+G
Sbjct: 236 LHAHVVKMQ-YLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHG 294

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              +A++ F MM E   I PN+ T+  +L +   V     G   H +VIK  +   VFV 
Sbjct: 295 DFKKALKQFSMMRESG-IEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVG 353

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
           T ++DMY   G +D+A   F Q+ R++S V WNA+I+ + ++ + +KA+  F +M+ E V
Sbjct: 354 TAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDV 413

Query: 546 RPDHITFVSLLTACSH-SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
             +  T+ ++  ACS    L +  Q +  +++    ++ +L     +++ + + G L   
Sbjct: 414 ACNEFTYSNIFKACSSFPSLATTVQIHSRLIKS--NVESNLHVASSLIEAYTQCGSL--- 468

Query: 605 HNFIQNMPVRPDASI--WGALLGACRIHGN 632
            N +Q      DA +  W +++ A   +G+
Sbjct: 469 ENAVQVFTQISDADVVSWNSIIKAYSQNGD 498



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 178/386 (46%), Gaps = 35/386 (9%)

Query: 246  TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            T A  + + AR   +  G  +H ++V  GL    + +  L++ Y + G + +A ++FD++
Sbjct: 805  TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864

Query: 306  MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
               ++  W  +  A  +      A   F+ MQ+ G++P+   L S+      L+D R   
Sbjct: 865  PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924

Query: 366  SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            ++H  I++   F  D  I +A++ MY+K G +  AC VF+ +  KD++  N +++GYAQ+
Sbjct: 925  NMHTVILKNS-FESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQH 983

Query: 426  GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
            G   EA+++ Q M++   + PN  ++ +++  +S VG      ++   +  N +  DV  
Sbjct: 984  GFVHEALBLVQKMQQAG-VKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDV-- 1040

Query: 486  ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
                                         V W ++IS    +    +  + F++MLD+G 
Sbjct: 1041 -----------------------------VSWTSVISGFVQNFHNHEGFDAFKEMLDQGF 1071

Query: 546  RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
             P  +T  SLL AC++   +  G+   H      G++  +     +VD++ + G++  A 
Sbjct: 1072 CPSSVTISSLLPACTNVANLRHGKE-IHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAK 1130

Query: 606  NFIQNMPVRPDASIWGALLGACRIHG 631
                 MP R +   W +L+     HG
Sbjct: 1131 ILFYMMPER-NTVTWNSLIFGYANHG 1155



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 138/679 (20%), Positives = 266/679 (39%), Gaps = 83/679 (12%)

Query: 47   EIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
            E  + ++F++C+    L    ++H+ L+ S     +  ++ L+  Y   G L  +   F 
Sbjct: 417  EFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFT 476

Query: 104  HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
             IS  +V +WNS+I  Y + G   +A+    +  +  G +P   TF  VL AC       
Sbjct: 477  QISDADVVSWNSIIKAYSQNGDPWKAIFLLRKM-IEEGNKPTSXTFLTVLSACS------ 529

Query: 164  KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQS 222
              H  +++ G E+                     + +  D  ++ +    + M+    ++
Sbjct: 530  --HSGLVQEGQEF--------------------FKSMVQDYSIQPEETHCSCMVDILGRA 567

Query: 223  GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF---NL 279
            G    ALD + ++     +M P   ASI      +    S L +  Y+ +  L+    + 
Sbjct: 568  GQLENALDFIKKL-----TMKP--TASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDA 620

Query: 280  FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
             V   L NMYA+ G    A     ++ME+  +S     +  E +N     + FF+  +  
Sbjct: 621  TVYVTLSNMYAEVGRWADAENQ-RRLMEQKEISKEPGCSWIEVNNK---MYKFFSHDKAH 676

Query: 340  GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
               P +     L  +V Q+ D   S      +       ++ +I    +    KL +   
Sbjct: 677  PEMPKVYE--KLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLI----LYHSEKLAVCFG 730

Query: 400  ACAVFEGLPVK------------DVISWNTLITG-YAQNGLASEAI-----------EVF 435
              ++  G P++              + + + IT  Y    LA+ A             V+
Sbjct: 731  LLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYIPTPLAAAAAMQSLINRANVYRVY 790

Query: 436  QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
            + +        +  TY   +  Y+   AL +G  +HA ++   L    + A  L+  Y +
Sbjct: 791  RNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTE 850

Query: 496  CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
            CG++ +A  LF ++P ++   W  +       G  ++AL+ F +M  EG+RP+     S+
Sbjct: 851  CGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSI 910

Query: 556  LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
            L AC H      G+   H +  +   +        ++ ++ + GH+  A   + +  V  
Sbjct: 911  LKACGHLSDRRTGEN-MHTVILKNSFESDAYIISALIYMYSKCGHVEKACR-VFDWIVDK 968

Query: 616  DASIWGALLGACRIHG--NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            D  +  A++     HG  +  L  V   +   V    V +  L++  ++ VG    V EV
Sbjct: 969  DLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAG-FSQVGDKSMVSEV 1027

Query: 674  RSLARDRGLKK-TPGWSSI 691
              L    G++     W+S+
Sbjct: 1028 FRLMTANGVEPDVVSWTSV 1046



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 24/252 (9%)

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +N+AC +FE  P +  +S    IT   ++G   +  E    ++E      N+  +V    
Sbjct: 56  LNNACILFEKTPKRIGVS----ITESHRSGCTDDPEE---GVKEAGFFTRNETPHVEFGG 108

Query: 457 AYSH-------------VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
            + H              G +  G + H  V+K  L  D FV T L+DMY KCG +D A+
Sbjct: 109 GFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAV 168

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            ++ ++    +   N +IS +  +G   +A   F Q+ + G RP+H T+ ++L  C    
Sbjct: 169 RVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTIS 228

Query: 564 LVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
            + EG Q + H+++ ++  +  + +   ++ L+ + G +  A    +++  R   S W A
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCGMMEEAEIVFESLRQRNIIS-WTA 285

Query: 623 LLGACRIHGNME 634
            +     HG+ +
Sbjct: 286 SINGFYQHGDFK 297



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 29/220 (13%)

Query: 48   IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
            +    L  +CT    L H K +H   +V G  K V+  + LV+ YA  G +S ++  F  
Sbjct: 1076 VTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYM 1135

Query: 105  ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK 164
            +  RN  TWNS+I  Y   G  +EA++ F Q    S  + D  TF  VL AC        
Sbjct: 1136 MPERNTVTWNSLIFGYANHGYCNEAIELFNQME-ESDTKLDHLTFTAVLNACS------- 1187

Query: 165  IHCSVLKLG------FEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGS 211
             H  +++LG       +    +   L H  C      R G  + A  L   MPV  D   
Sbjct: 1188 -HAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFV 1246

Query: 212  WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
            W A++ G C++   +E  ++  E   E   ++P +  S L
Sbjct: 1247 WGALL-GACRNHGNIELAEVAAEHLFE---LEPESPGSSL 1282


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/569 (39%), Positives = 335/569 (58%), Gaps = 37/569 (6%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           + L   YA  G + +++ +F +     V  W +II  +        A  F+  M   G++
Sbjct: 13  DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE 72

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+  T  S    + +L      +++H   ++ G F  D+ +   ++D+YA+ G + SA  
Sbjct: 73  PNAFTFSS----ILKLCPIEPGKALHSQAVKLG-FDSDLYVRTGLLDVYARGGDVVSAQQ 127

Query: 403 VFEGLPVKDVIS-------------------------------WNTLITGYAQNGLASEA 431
           +F+ +P K ++S                               WN +I GY QNG+ +EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           + +F+ M +  +  PN+ T +S+L A   +GAL  G  +H+ +  N + F+V V T LVD
Sbjct: 188 LVLFRRMLKA-KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 246

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KCG ++DA  +F ++     V WN++I  + + G   +AL  F+ M   G+ P +IT
Sbjct: 247 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNIT 306

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F+ +L+AC HSG V+EG   F+ M++E+GI+P ++HYGCMV+L GRAGH+  A+  ++NM
Sbjct: 307 FIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM 366

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
            + PD  +WG LLGACR+HG + LG    + L + +  N G Y+L+SNIYA VG W+GV 
Sbjct: 367 NIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVA 426

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +R++ +D G+KK PG SSIEVNNKV  F  G   HPK ++IY  L  +   +KS GY P
Sbjct: 427 RLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTP 486

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
               VL D+ E EKE  L  HSE+LAIAFG+I++ P + I+I KNLRVC DCH  TK IS
Sbjct: 487 QTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLIS 546

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IT R+I+VRD NRFHHF +G CSCGDYW
Sbjct: 547 KITGRKIVVRDRNRFHHFVNGSCSCGDYW 575



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 195/427 (45%), Gaps = 68/427 (15%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL   YA+LG L +S   F      +V+ W ++I  +   G   +A++ FY   LT G+ 
Sbjct: 14  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALN-FYAQMLTQGVE 72

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           P+ +TF  +LK C  +  GK +H   +KLGF+ D++V   LL +Y R G    A++LFD 
Sbjct: 73  PNAFTFSSILKLCP-IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDT 131

Query: 204 MPV-------------------------------RDSGSWNAMISGYCQSGNAVEALDIL 232
           MP                                RD   WN MI GY Q+G   EAL + 
Sbjct: 132 MPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLF 191

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             M       + +TV S+L  C +   + SG  +H YI  +G++FN+ V   L++MY+K 
Sbjct: 192 RRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKC 251

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G +  A  VFD++ ++DVV+WNS+I  Y        A   F +M + G+ P  +T + + 
Sbjct: 252 GSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGI- 310

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY----------------AKLGI 396
                L+ C +S          GW  E   I N + D Y                 + G 
Sbjct: 311 -----LSACGHS----------GWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGH 355

Query: 397 INSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           +  A  + + + ++ D + W TL+     +G  +   ++ +++ + N    N GTY+ + 
Sbjct: 356 VEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL--ANSGTYILLS 413

Query: 456 PAYSHVG 462
             Y+ VG
Sbjct: 414 NIYAAVG 420



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 171/352 (48%), Gaps = 41/352 (11%)

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           W A+I G+   G   +AL+   +M  +GV  +  T +SIL +C     I  G  +H   V
Sbjct: 43  WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAV 98

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME------------------------ 307
           K G + +L+V   L+++YA+ G +  A ++FD M E                        
Sbjct: 99  KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 158

Query: 308 -------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
                  RD V WN +I  Y Q+  P  A   F  M +A  +P+ +T++S+ S   QL  
Sbjct: 159 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 218

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             + R VH +I   G    +V +G A+VDMY+K G +  A  VF+ +  KDV++WN++I 
Sbjct: 219 LESGRWVHSYIENNG-IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 277

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GYA  G + EA+++F+ M     ++P   T++ IL A  H G + +G  I  + +K+   
Sbjct: 278 GYAMXGFSQEALQLFKSMCRMG-LHPTNITFIGILSACGHSGWVTEGWDIFNK-MKDEYG 335

Query: 481 FDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
            +  +    C+V++ G+ G ++ A  L   +      V W  ++    +HG+
Sbjct: 336 IEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGK 387



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 6/248 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K++ S T ++  YA  G+L  +R  FD +  R+   WN MI  Y + G  +EA+  F + 
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 137 TLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            L +  +P+  T   VL AC  L     G+ +H  +   G +++V V  +L+ MY + G 
Sbjct: 195 -LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              AR +FD +  +D  +WN+MI GY   G + EAL +   M   G+    IT   IL  
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA 313

Query: 254 CARSDNILSGLLIHLYIV-KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVV 311
           C  S  +  G  I   +  ++G+E  +     ++N+  + G +  A  +   M +E D V
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 373

Query: 312 SWNSIIAA 319
            W +++ A
Sbjct: 374 LWGTLLGA 381



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 37/268 (13%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E+    +  +C +L  ++    +H+ +  +G    V   T LV+ Y+  G L  +R  FD
Sbjct: 203 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 262

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
            I  ++V  WNSMI  Y   G   EA+  F       GL P   TF  +L AC       
Sbjct: 263 KIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMC-RMGLHPTNITFIGILSACG------ 315

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS-GSWNAMISGYCQS 222
             H   +  G  WD+F                   K+ D+  +      +  M++   ++
Sbjct: 316 --HSGWVTEG--WDIF------------------NKMKDEYGIEPKIEHYGCMVNLLGRA 353

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G+  +A +++  M +E    DP+   ++L  C     I  G  I   +V   L  N    
Sbjct: 354 GHVEQAYELVKNMNIEP---DPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA-NSGTY 409

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDV 310
             L N+YA  G      R+   M +  V
Sbjct: 410 ILLSNIYAAVGNWDGVARLRTMMKDSGV 437


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/749 (33%), Positives = 407/749 (54%), Gaps = 59/749 (7%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           + +++ S+T  ++ Y  +GD+  +R  FD+  +  R + +WN+M+S Y    +  +A+  
Sbjct: 15  QARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLL 74

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           F Q                     RN V                       ++  Y + G
Sbjct: 75  FDQMPQ------------------RNTVSFN-------------------GMISGYVKNG 97

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           +   ARK+FD MP R+  SW +M+ GY Q G   EA  +  EM    V    + +  +L 
Sbjct: 98  MVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLK 157

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
                D      +I         E ++ V  N+I  Y + G +  A  +FD+M  R+V +
Sbjct: 158 ESRIDDAKKLFDMIP--------EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFT 209

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           W ++++ Y ++     A   F  M +          VS T+++  +   ++ R    F +
Sbjct: 210 WTTMVSGYAKNGRVDVARKLFEVMPER-------NEVSWTAML--MGYTQSGRMKEAFEL 260

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
                ++ ++  N ++  +   G ++ A  +FEG+  +D  +WN +I  + + GL  EA+
Sbjct: 261 FEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEAL 320

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  M+    +  N  + +S+L   + + +L  G ++HAR++++    D++VA+ L+ M
Sbjct: 321 GLFARMQR-EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITM 379

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCG +  A  +F +      V WN++I+ +  HG G++ALN F  M   GV+PD +TF
Sbjct: 380 YVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTF 439

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           + +L+ACS+SG V EG   F  M+  + ++P ++HY CMVDL GRAG +  A   ++ MP
Sbjct: 440 IGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMP 499

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           + PDA +WGALLGACR H  ++L  VA ++L +++ +N G YVL+S++YA  G+W  V+ 
Sbjct: 500 MEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEV 559

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKMKSLGYVP 731
           +R    +R + K PG S IEV  KV +F  G+ ++HP+   I   L  L+  ++  GY P
Sbjct: 560 LRKKI-NRRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCP 618

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D SFVL DV+E+EK H L  HSERLA+A+G++  P   PI++ KNLRVCGDCH+  K I+
Sbjct: 619 DGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIA 678

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++T REII+RD+NRFHHFKDG CSC D+W
Sbjct: 679 KVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 141/285 (49%), Gaps = 15/285 (5%)

Query: 44  ESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  E+ +  +    T+   +K    L   +  +K + +  +++  +   G++  +R  F+
Sbjct: 235 ERNEVSWTAMLMGYTQSGRMKEAFELFE-AMPVKWIVACNEMILQFGLAGEMHRARMMFE 293

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +  R+  TWN+MI V+ R G   EA+  F +     G+  +F +   VL  C +L    
Sbjct: 294 GMKERDEGTWNAMIKVFERKGLDLEALGLFARMQ-REGVALNFPSMISVLSVCASLASLD 352

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++H  +++  F+ D++VA+ L+ MY + G    A+ +F+    +D   WN+MI+GY 
Sbjct: 353 HGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYS 412

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH-----LYIVKHGL 275
           Q G   EAL++  +M   GV  D +T   +L  C+ S  +  G  I       Y V+ G+
Sbjct: 413 QHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGI 472

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           E        ++++  + G +  A+ + ++M ME D + W +++ A
Sbjct: 473 EH----YACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGA 513



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 139/324 (42%), Gaps = 46/324 (14%)

Query: 329 AHGFFTTMQQAGIQP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            +G+  T++   +Q   L +  S  S   ++ D  N+R V             +   NA+
Sbjct: 2   GYGYAATLRCRMVQARSLCSNTSAISRYGRIGDIHNARKVFD---NTPLPQRTIASWNAM 58

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           V  Y +      A  +F+ +P ++ +S+N +I+GY +NG+ ++A +VF +M E N +   
Sbjct: 59  VSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV--- 115

Query: 448 QGTYVSILPAYSHVGALRQGIKI---------------------HARVIKNCLCF----- 481
             ++ S++  Y   G + +  K+                      +R+      F     
Sbjct: 116 --SWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE 173

Query: 482 -DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            DV V T ++  Y + GR+D+A  LF ++   +   W  ++S +  +G+ D A   F  M
Sbjct: 174 KDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM 233

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            +     + +++ ++L   + SG + E    F  M  ++ +  +      M+  FG AG 
Sbjct: 234 PER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNE-----MILQFGLAGE 284

Query: 601 LGMAHNFIQNMPVRPDASIWGALL 624
           +  A    + M  R D   W A++
Sbjct: 285 MHRARMMFEGMKER-DEGTWNAMI 307


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/722 (34%), Positives = 381/722 (52%), Gaps = 18/722 (2%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVD 161
           IS++     N  +    + G+L+EA + F+Q    +G+    Y++  + +ACR   +L  
Sbjct: 41  ISHKQGQVENLHLVSLSKHGKLNEAFE-FFQEMDKAGVSVSLYSYQCLFEACRELRSLSH 99

Query: 162 GKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           G+ +H + +++G E   V +   +L MYC  G    A KLFD+M   ++ S   MIS Y 
Sbjct: 100 GRLLH-NRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYA 158

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           + G   +A+ +   M   G         ++L        +  G  IH ++++ GL  N  
Sbjct: 159 EQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNAS 218

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           +   ++NMY K G +  A RVFDQM  +  V+W  ++  Y Q+     A   F  +   G
Sbjct: 219 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEG 278

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++ D      +    A L + R  + +H  + + G   E V +G  +VD Y K     SA
Sbjct: 279 VEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECE-VSVGTPLVDFYIKCSSFESA 337

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
           C  F+ +   + +SW+ +I+GY Q     EA++ F+ +   N +  N  TY SI  A S 
Sbjct: 338 CRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSV 397

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +     G ++HA  IK  L    +  + L+ MY KCG +DDA  +F  +     V W A 
Sbjct: 398 LADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAF 457

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           IS H  +G   +AL  F +M+  G++P+ +TF+++LTACSH+GLV +G+ Y   M  ++ 
Sbjct: 458 ISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYN 517

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           + P + HY CM+D++ R+G L  A  F++NMP  PDA  W   L  C  H N+ELG +A 
Sbjct: 518 VAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAG 577

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           + L ++D E+   YVL  N+Y   GKWE   EV  L  +R LKK    S I+   K+  F
Sbjct: 578 EELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRF 637

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
             G++ HP+ ++IY++L+         G++    F     E  E+   L  HSERLAIAF
Sbjct: 638 IVGDKHHPQSQEIYEKLKEFD------GFMEGDMFQCSMTERREQ---LLDHSERLAIAF 688

Query: 761 GIIS--SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
           G+IS     ++PI++FKNLR C DCH + K +S +T  EI++RDS RFHHFK+G CSC D
Sbjct: 689 GLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCND 748

Query: 819 YW 820
           YW
Sbjct: 749 YW 750



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 240/484 (49%), Gaps = 22/484 (4%)

Query: 53  LFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           LF++C +L    H + LH  + +  +  +V     ++  Y   G L  +   FD +S  N
Sbjct: 87  LFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLN 146

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
             +  +MIS Y   G L +AV  F +  L SG +P    +  +LK+    R L  G++IH
Sbjct: 147 AVSRTTMISAYAEQGLLDKAVGLFSRM-LESGDKPPSSMYTTLLKSLVNPRALDIGRQIH 205

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             V++ G   +  +   +++MY + G    A+++FD M V+   +W  ++ GY Q+G A 
Sbjct: 206 AHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRAR 265

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           +AL +  ++  EGV  D    + +L  CA  + +  G  IH  + K GLE  + V   L+
Sbjct: 266 DALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLV 325

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDL 345
           + Y K      A R F ++ E + VSW++II+ Y Q +    A   F +++ +  +  + 
Sbjct: 326 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNS 385

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-----NAVVDMYAKLGIINSA 400
            T  S+    + L DC     VH   ++R       +IG     +A++ MY+K G ++ A
Sbjct: 386 FTYTSIFQACSVLADCNIGGQVHADAIKRS------LIGSQYGESALITMYSKCGCLDDA 439

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VFE +   D+++W   I+G+A  G ASEA+ +F+ M  C  + PN  T++++L A SH
Sbjct: 440 HEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG-MKPNSVTFIAVLTACSH 498

Query: 461 VGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWN 518
            G + QG   +   + K  +   +    C++D+Y + G +D+A+     +P    ++ W 
Sbjct: 499 AGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWK 558

Query: 519 AIIS 522
             +S
Sbjct: 559 CFLS 562



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 193/414 (46%), Gaps = 12/414 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++HA ++ +G        T +VN Y   G L  ++  FD ++ +    W  ++  Y + 
Sbjct: 202 RQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQA 261

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           GR  +A+  F    +T G+  D + F  VLKAC +L +   GK+IH  V KLG E +V V
Sbjct: 262 GRARDALKLFVDL-ITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSV 320

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-G 239
              L+  Y +      A + F ++   +  SW+A+ISGYCQ     EA+     +R +  
Sbjct: 321 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 380

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V ++  T  SI   C+   +   G  +H   +K  L  + +  + LI MY+K G +  A 
Sbjct: 381 VVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAH 440

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
            VF+ M   D+V+W + I+ +    +   A   F  M   G++P+ +T +++ +  +   
Sbjct: 441 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 500

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
                +     ++R+      +   + ++D+YA+ G+++ A    + +P + D +SW   
Sbjct: 501 LVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCF 560

Query: 419 ITG-YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
           ++G +    L    I      EE  +++P +   YV     Y+  G   +  ++
Sbjct: 561 LSGCWTHKNLELGKI----AGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEV 610



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 8/278 (2%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C  L  +   K++HA +   G    V   T LV+FY        +   F  I 
Sbjct: 286 FSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIR 345

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
             N  +W+++IS Y +  +  EAV  F      + +  + +T+  + +AC  L D   G 
Sbjct: 346 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGG 405

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K       +  ++L+ MY + G  + A ++F+ M   D  +W A ISG+   G
Sbjct: 406 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYG 465

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVS 282
           NA EAL + ++M   G+  + +T  ++L  C+ +  +  G   +   + K+ +   +   
Sbjct: 466 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHY 525

Query: 283 NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
           + +I++YA+ G++  ALR    M  E D +SW   ++ 
Sbjct: 526 DCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSG 563


>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
 gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
          Length = 670

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/629 (37%), Positives = 374/629 (59%), Gaps = 39/629 (6%)

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK--HGLEFNLFVSNN 284
           +++ +L+   LE   +DP+  A+++  C  ++ I +   +H +I+   H      F++N 
Sbjct: 46  KSIQLLESRELE---LDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANL 102

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI MY K G + +A  +F+ M  R+V +W   +AA+  +     A  FF  M Q+G +PD
Sbjct: 103 LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPD 162

Query: 345 LLT--LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            +T  ++               R +H +    G  + +V++G AV+ MY K G ++ A A
Sbjct: 163 RVTFSVILAAIAQMGAAAIDQGREIHRYARISG-LLPNVVVGTAVISMYGKCGRLDDARA 221

Query: 403 VFEGLPVK-------------------------------DVISWNTLITGYAQNGLASEA 431
            FE L  K                               D + WN +I  YAQ+G   +A
Sbjct: 222 AFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQA 281

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           +++++ M +  ++ P QGT+V+++   + + AL+QG  IHARV       ++ V+  LV 
Sbjct: 282 LDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVH 341

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MYGKCG +D+A+ +F+ +     + WN IIS +  HG  D+AL  +++M  +GV+P  +T
Sbjct: 342 MYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVT 401

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           FV LL+ACSH GLV++G  YF+ MQ++  IKP + H+GC++DL GR G L  A   +++M
Sbjct: 402 FVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSM 461

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P++ +A  W +LLGAC+ HG+++ G  A+D++ +      G YVL+SNIYA  G+W+ V+
Sbjct: 462 PIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVE 521

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           ++R +   RG+KK+PG S IE+ + V  F +G+ +HP+ E+IY EL  +  +MK LGYVP
Sbjct: 522 KIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVP 581

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D S V  D+EE+EKE +L  HSE+LAI +G +  P KS ++I KNLRVC DCH  TKF+S
Sbjct: 582 DTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMS 641

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IT R+I+VRD+ RFH F++G CSC DYW
Sbjct: 642 RITGRKIVVRDAARFHLFENGSCSCRDYW 670



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 201/426 (47%), Gaps = 40/426 (9%)

Query: 155 ACRNLVDGKKIHCSVLKLGFE--WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           A   +   +++H  +L L        F+A  L+ MY + G    AR+LF+ MP R+  +W
Sbjct: 72  AANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTW 131

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL--PVCARSDNILSGLLIHLYI 270
              ++ +  +G   EAL     M   G   D +T + IL       +  I  G  IH Y 
Sbjct: 132 TVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYA 191

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMM-------------------------------RHAL 299
              GL  N+ V   +I+MY K G +                               R AL
Sbjct: 192 RISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREAL 251

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQL 358
            +F +M + D V WN++IAAY Q      A   + +M     + P   T V++  + A+L
Sbjct: 252 ELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAEL 311

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
           +  +  R++H  + R   F  ++++ NA+V MY K G ++ A  VF  + +KD ISWNT+
Sbjct: 312 SALKQGRAIHARV-RATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTI 370

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I+ YA +G + +A+ ++Q M +   + P + T+V +L A SH G +  G+    R+  + 
Sbjct: 371 ISSYAYHGHSDQALLLYQEM-DLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDH 429

Query: 479 -LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNF 536
            +   V    C++D+ G+ GR+ +A  +   +P ++++V W +++     HG   + +  
Sbjct: 430 RIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRA 489

Query: 537 FRQMLD 542
             Q++D
Sbjct: 490 ADQVVD 495



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 207/487 (42%), Gaps = 75/487 (15%)

Query: 44  ESREIDFDD-----LFQSCTKLHHV---KRLHA--LLVVSGKIKTVFSSTKLVNFYANLG 93
           ESRE++ D      L + C   + +   +RLH+  L +     +  F +  L+  Y   G
Sbjct: 52  ESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCG 111

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
            L ++R  F+ +  RNV+TW   ++ +   G  SEA+  F++    SG RPD  TF  +L
Sbjct: 112 RLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEAL-VFFRRMYQSGERPDRVTFSVIL 170

Query: 154 KACRN-----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR---------- 198
            A        +  G++IH      G   +V V  +++ MY + G  + AR          
Sbjct: 171 AAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKN 230

Query: 199 ---------------------KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
                                +LF +M   DS  WNAMI+ Y Q G   +ALD+   M  
Sbjct: 231 SVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMH- 289

Query: 238 EGVSMDPI--TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           +   + P   T  +++ VCA    +  G  IH  +     + NL VSN L++MY K G +
Sbjct: 290 DTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCL 349

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             AL VF  M  +D +SWN+II++Y        A   +  M   G++P  +T V L S  
Sbjct: 350 DEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSAC 409

Query: 356 AQLNDCRNSRSVHGFIMRRG----WFMED-------VIIGNAVVDMYAKLGIINSACAVF 404
           +           HG ++  G    + M+D       V     ++D+  + G +  A  V 
Sbjct: 410 S-----------HGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVL 458

Query: 405 EGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           + +P++ + + W +L+     +G     +     +   + +    G YV +   Y+  G 
Sbjct: 459 KSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV--VDRVPWTSGGYVLLSNIYAAAGR 516

Query: 464 LRQGIKI 470
            +   KI
Sbjct: 517 WKDVEKI 523


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/738 (34%), Positives = 394/738 (53%), Gaps = 16/738 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GD   +   FD +S  N+ T+NS+IS YV+   L + +  F +     GL+ D Y     
Sbjct: 15  GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDK-ARRLGLKLDKYNCAGA 73

Query: 153 LKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           L AC    NL  GK IH  +L  G    V +  SL+ MY + G  + AR LFD     D 
Sbjct: 74  LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDG 133

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN--ILSGLLIH 267
            SWN++I+GY Q+G   E L IL +M   G++ +  T+ S L  C+ + N   + G ++H
Sbjct: 134 VSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 193

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND-- 325
            + +K GL  ++ V   L++MYAK G +  A+++FDQM++++VV +N+++A   Q     
Sbjct: 194 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 253

Query: 326 ---PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                 A   F  M+  GI+P + T  SL      + D + ++ VH  + + G  + D  
Sbjct: 254 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNG-LLSDEY 312

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           IG+ ++D+Y+ LG +  A   F  +    ++    +I GY QNG    A+ +F  +    
Sbjct: 313 IGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYE 372

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           E  P++  + +I+ + +++G LR G +I     K  +          + MY K G +  A
Sbjct: 373 E-KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAA 431

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
              F Q+     V W+ +I  +  HG   +AL FF  M   G+ P+H  F+ +L ACSH 
Sbjct: 432 NLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 491

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV EG RYF  M++++ +K H+KH  C+VDL GRAG L  A + I  +    +  +W A
Sbjct: 492 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 551

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LL ACRIH +       + ++ E++      YVL+ NIY + G      +VR+L  +R +
Sbjct: 552 LLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRI 611

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEE 742
           KK PG S I++ +KV  F +G+R+H    +IY +L  + A  K L    D   +L    E
Sbjct: 612 KKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKD---ILGYKIE 668

Query: 743 DEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
            E    +  HSE+LA+AFG++     +P+++ KNLR+C DCH   K  S + +RE+IVRD
Sbjct: 669 HEHLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRD 728

Query: 803 SNRFHHFKDGICSCGDYW 820
           S RFHHFKDG CSCGDYW
Sbjct: 729 SVRFHHFKDGSCSCGDYW 746



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 243/465 (52%), Gaps = 15/465 (3%)

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
           C+ G    A KLFD M   +  ++N++ISGY Q  N  + + + D+ R  G+ +D    A
Sbjct: 12  CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
             L  C++S N+ +G +IH  I+ +GL   + ++N+LI+MY+K G + +A  +FD   + 
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRN-SRS 366
           D VSWNS+IA Y Q+            M Q G+  +  TL S L +  +  N C+     
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-- 424
           +H   ++ G  + DV++G A++DMYAK G ++ A  +F+ +  K+V+ +N ++ G  Q  
Sbjct: 192 LHDHAIKLGLHL-DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250

Query: 425 ---NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
              +  A +A+ +F  M+ C  I P+  TY S+L A   V   +   ++HA + KN L  
Sbjct: 251 TIEDKCAYKALNLFFEMKSCG-IKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLS 309

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D ++ + L+D+Y   G + DA+  F  +   + VP  A+I  +  +G+ + AL+ F ++L
Sbjct: 310 DEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELL 369

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
               +PD   F +++++C++ G++  G++       + GI          + ++ ++G L
Sbjct: 370 TYEEKPDEFIFSTIMSSCANMGMLRSGEQ-IQGHATKVGISRFTIFQNSQIWMYAKSGDL 428

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
             A+   Q M   PD   W  ++ +   HG+    A+ + R FE+
Sbjct: 429 YAANLTFQQME-NPDIVSWSTMICSNAQHGH----AMEALRFFEL 468



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 239/476 (50%), Gaps = 15/476 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H L++V G    V  +  L++ Y+  G + ++R  FDH    +  +WNS+I+ YV+ 
Sbjct: 87  KMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQN 146

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK-----IHCSVLKLGFEWDV 178
           G+  E +    Q    +GL  + YT    LKAC +  +G K     +H   +KLG   DV
Sbjct: 147 GKYEELLTIL-QKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 205

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN-----AVEALDILD 233
            V  +LL MY + G  + A ++FD M  ++   +NAM++G  Q        A +AL++  
Sbjct: 206 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 265

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           EM+  G+     T +S+L  C   ++      +H  + K+GL  + ++ + LI++Y+  G
Sbjct: 266 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 325

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            M  AL  F+ +    +V   ++I  Y Q+ +  +A   F  +     +PD     ++ S
Sbjct: 326 SMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMS 385

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A +   R+   + G   + G      I  N+ + MYAK G + +A   F+ +   D++
Sbjct: 386 SCANMGMLRSGEQIQGHATKVG-ISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIV 444

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW+T+I   AQ+G A EA+  F++M+ C  I PN   ++ +L A SH G + +G++    
Sbjct: 445 SWSTMICSNAQHGHAMEALRFFELMKSCG-IEPNHFAFLGVLIACSHRGLVEEGLRYFDT 503

Query: 474 VIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           + K+  +   V    C+VD+ G+ GR+ DA SL  ++      V W A++S   IH
Sbjct: 504 MEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 559


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/669 (35%), Positives = 389/669 (58%), Gaps = 7/669 (1%)

Query: 157 RNLVDGKKIHCSVL---KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
           ++L  GK IH  ++   +   + D+    SL+++Y + G +  ARKLFD M  R+  SW+
Sbjct: 37  KSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWS 96

Query: 214 AMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           A++ GY   G  +E L +   +  L+    +      +L  CA S  +  G   H Y++K
Sbjct: 97  ALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLK 156

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            GL  + +V N LI+MY++   +  A+++ D +   DV S+NSI++A  +S     A   
Sbjct: 157 SGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQV 216

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
              M    +  D +T VS+  + AQ+ D +    +H  +++ G  + DV + + ++D Y 
Sbjct: 217 LKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTG-LVFDVFVSSTLIDTYG 275

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G + +A   F+GL  ++V++W  ++T Y QNG   E + +F  ME   +  PN+ T+ 
Sbjct: 276 KCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKME-LEDTRPNEFTFA 334

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
            +L A + + AL  G  +H R++ +     + V   L++MY K G ID + ++F  +   
Sbjct: 335 VLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNR 394

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
             + WNA+I  +  HG G +AL  F+ M+  G  P+++TF+ +L+AC H  LV EG  YF
Sbjct: 395 DVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYF 454

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP-VRPDASIWGALLGACRIHG 631
             + ++F ++P L+HY CMV L GRAG L  A NF++    V+ D   W  LL AC IH 
Sbjct: 455 DQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHR 514

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           N  LG   ++ + ++D  +VG Y L+SN++A   KW+GV ++R L ++R +KK PG S +
Sbjct: 515 NYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWL 574

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           ++ N   +F +    HP+  +I+++++ L A +K LGY PD   VL DVE+++KE  L+ 
Sbjct: 575 DIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSH 634

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE+LA+A+G++  PP  PI+I KNLR+C DCH   K IS+ T R IIVRD+NRFHHF++
Sbjct: 635 HSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFRE 694

Query: 812 GICSCGDYW 820
           G+C+C D+W
Sbjct: 695 GLCTCNDHW 703



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 156/498 (31%), Positives = 260/498 (52%), Gaps = 23/498 (4%)

Query: 64  KRLHALLVV---SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
           K +HA LVV   + K   +     L+N Y+  G    +R  FD +  RNV +W++++  Y
Sbjct: 43  KTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGY 102

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWD 177
           +  G + E +  F          P+ Y F  VL  C +   + +GK+ H  +LK G    
Sbjct: 103 LHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLH 162

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            +V  +L+HMY R    + A ++ D +P  D  S+N+++S   +SG   EA  +L  M  
Sbjct: 163 QYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVD 222

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
           E V  D +T  S+L +CA+  ++  GL IH  ++K GL F++FVS+ LI+ Y K G + +
Sbjct: 223 ECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLN 282

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A + FD + +R+VV+W +++ AY Q+         FT M+    +P+  T   L +  A 
Sbjct: 283 ARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACAS 342

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           L        +HG I+  G F   +I+GNA+++MY+K G I+S+  VF  +  +DVI+WN 
Sbjct: 343 LVALAYGDLLHGRIVMSG-FKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNA 401

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I GY+ +GL  +A+ VFQ M    E  PN  T++ +L A  H+  +++G     +++K 
Sbjct: 402 MICGYSHHGLGKQALLVFQDMMSAGEC-PNYVTFIGVLSACVHLALVQEGFYYFDQIMKK 460

Query: 478 CLCFDVFVA----TCLVDMYGKCGRIDDA---MSLFYQVPRSSSVPWNAIISCHGIHGQG 530
              FDV       TC+V + G+ G +D+A   M    QV +   V W  +++   IH   
Sbjct: 461 ---FDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQV-KWDVVAWRTLLNACHIH--- 513

Query: 531 DKALNFFRQMLDEGVRPD 548
            +  N  +Q+ +  ++ D
Sbjct: 514 -RNYNLGKQITETVIQMD 530


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/709 (34%), Positives = 396/709 (55%), Gaps = 17/709 (2%)

Query: 70   LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
            ++VSG    V  +  L+  + NLG +  +   FD +   +  +WN+MIS+Y   G  S+ 
Sbjct: 473  VIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK- 531

Query: 130  VDCFYQFT--LTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASL 184
              CF  F+     GLRPD  T   ++  C +      G  IH   L+   +  V V  +L
Sbjct: 532  --CFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINAL 589

Query: 185  LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
            ++MY   G  + A  LF +M  RD  SWN MIS Y Q+ N+ +AL  L ++     S + 
Sbjct: 590  VNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNH 649

Query: 245  ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
            +T +S L  C+    ++ G ++H  +++  L+ NL V N+LI MY K   M  A +VF  
Sbjct: 650  LTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQS 709

Query: 305  MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN- 363
            M   D+VS+N +I  Y    D   A   F+ M+ AGI+P+ +T++++    A  ND  N 
Sbjct: 710  MPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNY 769

Query: 364  SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
             R +H +I+R G F+ D  + N+++ MYAK G + S+  +F  +  K+++SWN +I    
Sbjct: 770  GRPLHAYIIRTG-FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANV 828

Query: 424  QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
            Q G   EA+++F  M+       ++      L + + + +L +G+++H   +K+ L  D 
Sbjct: 829  QLGHGEEALKLFIDMQHAGN-KLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDS 887

Query: 484  FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP---WNAIISCHGIHGQGDKALNFFRQM 540
            +V    +DMYGKCG++D+ + +   VP  +  P   WN +IS +  +G   +A   F+QM
Sbjct: 888  YVVNAAMDMYGKCGKMDEMLQV---VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQM 944

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            +  G +PD++TFV+LL+ACSH+GLV +G  Y++ M   FG+ P +KH  C+VDL GR G 
Sbjct: 945  VATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGR 1004

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
               A  FI+ MPV P+  IW +LL + R H N+E+G   + +L E+D  +   YVL+SN+
Sbjct: 1005 FAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNL 1064

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            YA   +W  VD++RS  +   + K P  S +++ N+V  F  G+R H   EKIY +L  +
Sbjct: 1065 YATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEM 1124

Query: 721  TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
              K++ +GY+ D S  L D +E++KE  L +HSE+LA+A+G+I  P  S
Sbjct: 1125 LLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 1173



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 280/570 (49%), Gaps = 9/570 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL   +G +  V+  T L++ Y + G +S ++  F  +  RNV +W +++      G 
Sbjct: 368 IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 427

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
           L EA+  + Q     G+  +   F  V+  C    N V G ++   V+  G +  V VA 
Sbjct: 428 LEEALRAYRQMR-RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVAN 486

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+ M+   G  + A KLFD M   D+ SWNAMIS Y   G   +   +  +MR  G+  
Sbjct: 487 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 546

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T+ S++ VCA SD+   G  IH   ++  L+ ++ V N L+NMY+  G +  A  +F
Sbjct: 547 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 606

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
             M  RD++SWN++I++Y Q+ +   A      +      P+ LT  S     +      
Sbjct: 607 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 666

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           + + VH  +++      ++++GN+++ MY K   +  A  VF+ +P  D++S+N LI GY
Sbjct: 667 DGKMVHAIVLQLS-LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGY 725

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ-GIKIHARVIKNCLCF 481
           A     ++A++VF  M     I PN  T ++I  +++    L   G  +HA +I+     
Sbjct: 726 AVLEDGTKAMQVFSWMRSAG-IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS 784

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D +VA  L+ MY KCG ++ + ++F  +   + V WNAII+ +   G G++AL  F  M 
Sbjct: 785 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQ 844

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             G + D +     L++C+    + EG +  H +  + G+          +D++G+ G +
Sbjct: 845 HAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 903

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                 + +  +RP    W  L+     +G
Sbjct: 904 DEMLQVVPDQAIRPQ-QCWNTLISGYAKYG 932



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 166/601 (27%), Positives = 292/601 (48%), Gaps = 28/601 (4%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR---HTFDHISYRNVYTWNSMISVYVR 122
           +H L V      + F    L+ FY    D S +    H FD ++ R   TW + +S  VR
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 123 CGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACR------NLVDGKKIHCSVLK 171
           CG   +A      F +  G+R        +    ++ AC        +  G  IH    +
Sbjct: 321 CGSHGKA------FEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHR 374

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
            G   +V++  +LLH+Y   G+ + A++LF +MP R+  SW A++     +G   EAL  
Sbjct: 375 AGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRA 434

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +MR +GV  +    A+++ +C   +N + GL +   ++  GL+  + V+N+LI M+  
Sbjct: 435 YRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGN 494

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A ++FD+M E D +SWN++I+ Y            F+ M+  G++PD  TL SL
Sbjct: 495 LGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSL 554

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            S+ A  +   +   +H   +R       V + NA+V+MY+  G ++ A  +F  +  +D
Sbjct: 555 MSVCASSDHFSHGSGIHSLCLRSS-LDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRD 613

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +ISWNT+I+ Y QN  +++A++    +   NE +PN  T+ S L A S  GAL  G  +H
Sbjct: 614 LISWNTMISSYVQNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGACSSPGALIDGKMVH 672

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           A V++  L  ++ V   L+ MYGKC  ++DA  +F  +P    V +N +I  + +   G 
Sbjct: 673 AIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGT 732

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           KA+  F  M   G++P++IT +++  + + S  +    R  H      G          +
Sbjct: 733 KAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSL 792

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           + ++ + G+L  + N   ++  +   S W A++ A     N++LG         +D ++ 
Sbjct: 793 ITMYAKCGNLESSTNIFNSITNKNIVS-WNAIIAA-----NVQLGHGEEALKLFIDMQHA 846

Query: 652 G 652
           G
Sbjct: 847 G 847



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/495 (30%), Positives = 248/495 (50%), Gaps = 25/495 (5%)

Query: 62   HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
            H   +H+L + S    +V     LVN Y+  G LS +   F ++S R++ +WN+MIS YV
Sbjct: 566  HGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYV 625

Query: 122  RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDV 178
            +    ++A+    Q   T+   P+  TF   L AC +   L+DGK +H  VL+L  + ++
Sbjct: 626  QNCNSTDALKTLGQLFHTNE-SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 684

Query: 179  FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
             V  SL+ MY +      A K+F  MP  D  S+N +I GY    +  +A+ +   MR  
Sbjct: 685  LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA 744

Query: 239  GVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            G+  + IT+ +I    A S+++ + G  +H YI++ G   + +V+N+LI MYAK G +  
Sbjct: 745  GIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLES 804

Query: 298  ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
            +  +F+ +  +++VSWN+IIAA  Q      A   F  MQ AG + D + L    S  A 
Sbjct: 805  STNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCAS 864

Query: 358  LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            L        +HG  M+ G    D  + NA +DMY K G ++    V     ++    WNT
Sbjct: 865  LASLEEGMQLHGLGMKSG-LDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNT 923

Query: 418  LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV--- 474
            LI+GYA+ G   EA E F+ M       P+  T+V++L A SH G + +GI  +  +   
Sbjct: 924  LISGYAKYGYFKEAEETFKQMVATGR-KPDYVTFVALLSACSHAGLVDKGIDYYNSMASS 982

Query: 475  ------IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
                  IK+C+        C+VD+ G+ GR  +A     ++P   + + W +++S    H
Sbjct: 983  FGVSPGIKHCV--------CIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTH 1034

Query: 528  GQGDKALNFFRQMLD 542
               +      +++L+
Sbjct: 1035 KNLEIGRKTAKKLLE 1049



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 6/130 (4%)

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           IH   ++L      F   +LL  Y R      A  A  LFD+M  R   +W   +SG  +
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVC---ARSDNILSGLLIHLYIVKHGLEFN 278
            G    A ++L  MR  GV +    +AS++  C    R + I  G  IH    + GL  N
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157

Query: 279 LFVSNNLINM 288
           +++   L+++
Sbjct: 158 VYIGRALLHL 167



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 20/136 (14%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR---HTFDHISYRNVYTWNSMISVYVR 122
           +H L V      + F    L+ FY    D S +    H FD ++ R   TW + +S  VR
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 123 CGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKAC------RNLVDGKKIHCSVLK 171
           CGR   A      F +  G+R        +    ++ AC        +  G  IH    +
Sbjct: 98  CGRDGTA------FEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHR 151

Query: 172 LGFEWDVFVAASLLHM 187
            G   +V++  +LLH+
Sbjct: 152 AGLMGNVYIGRALLHL 167


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 391/698 (56%), Gaps = 9/698 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC+ L       ++H L V  G    V + + L++ YA    L  S   F  + 
Sbjct: 177 FAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMP 236

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            +N  +W+++I+  V+   L   ++ F +    +G+     TF  V ++C  L     G 
Sbjct: 237 EKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ-KAGVGVSQSTFASVFRSCAGLSALRLGS 295

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   LK  F  DV +  + L MY +    + A+KLF+ +P  +  S+NA+I GY +S 
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
             +EAL +   ++  G+ +D ++++     CA     L GL +H   +K   + N+ V+N
Sbjct: 356 KGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 415

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            +++MY K G +  A  VF++M+ RD VSWN+IIAA+EQ+ +       F  M Q+G++P
Sbjct: 416 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEP 475

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D  T  S+    A          +H  I++    + D  +G A++DMY+K G++  A  +
Sbjct: 476 DEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL-DSFVGIALIDMYSKCGMMEKAEKL 534

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
            + L  + V+SWN +I+G++    + EA + F  M E   ++P+  TY +IL   +++  
Sbjct: 535 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG-VDPDNFTYATILDTCANLVT 593

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           +  G +IHA++IK  L  D ++++ LVDMY KCG + D   +F + P    V WNA++  
Sbjct: 594 VELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG 653

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
           +  HG G++AL  F  M  E V+P+H TF+++L AC H GLV +G  YFH M   +G+ P
Sbjct: 654 YAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDP 713

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            L+HY C+VD+ GR+G +  A   I+ MP   DA IW  LL  C+IHGN+E+   A+  +
Sbjct: 714 QLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSI 773

Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
            +++ E+   YVL+SNIYAN G W  V ++R + R  GLKK PG S IE+ ++V  F  G
Sbjct: 774 LQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVG 833

Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           ++ HP+ ++IY+ L  LT +MK +GY+PD  F+L D E
Sbjct: 834 DKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 871



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 182/640 (28%), Positives = 317/640 (49%), Gaps = 46/640 (7%)

Query: 32  NSLQISP--DCLENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLV 86
            +L ISP        +++  F  +FQ C+    +   K+ HA ++++    TVF +  L+
Sbjct: 25  KTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLI 84

Query: 87  NFY-------------------------------ANLGDLSFSRHTFDHISYRNVYTWNS 115
             Y                               A  GD+  ++  FD +  R+V +WNS
Sbjct: 85  QMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNS 144

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           +IS Y+  G   + +D F Q     G   D  TF  VLK+C +L D   G +IH   +K+
Sbjct: 145 LISGYLHNGDHRKVIDVFLQMG-RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM 203

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF+ DV   ++LL MY +    + + + F  MP ++  SW+A+I+G  Q+ +    L++ 
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            EM+  GV +   T AS+   CA    +  G  +H + +K     ++ +    ++MY K 
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
             +  A ++F+ +   ++ S+N+II  Y +S+  I A G F  +Q++G+  D ++L    
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
              A +        VHG  M +     ++ + NA++DMY K G +  AC VFE +  +D 
Sbjct: 384 RACAVIKGDLEGLQVHGLSM-KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 442

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           +SWN +I  + QNG   + + +F  M +   + P++ TY S+L A +   AL  G++IH 
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSG-MEPDEFTYGSVLKACAGWQALNCGMEIHN 501

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
           R+IK+ L  D FV   L+DMY KCG ++ A  L  ++   + V WNAIIS   +  Q ++
Sbjct: 502 RIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEE 561

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCM 591
           A   F +ML+ GV PD+ T+ ++L  C++   V  G++ +  ++++E     ++     +
Sbjct: 562 AQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STL 619

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           VD++ + G++       +  P R D   W A++     HG
Sbjct: 620 VDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHG 658



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 268/547 (48%), Gaps = 42/547 (7%)

Query: 148 TFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-------------- 190
           TF  + + C   + L  GK+ H  ++   F+  VFV   L+ MY +              
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 191 ------------FGLAN-----VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
                       FG A      VA+KLFD MP RD  SWN++ISGY  +G+  + +D+  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           +M   G   D  T A +L  C+  ++   G+ IH   VK G + ++   + L++MYAK  
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +  +++ F  M E++ VSW++IIA   Q++D       F  MQ+AG+     T  S+  
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A L+  R    +HG  ++   F  DV+IG A +DMY K   ++ A  +F  LP  ++ 
Sbjct: 284 SCAGLSALRLGSQLHGHALKTD-FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           S+N +I GYA++    EA+ +F+++++   +  ++ +      A + +    +G+++H  
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSG-LGLDEVSLSGAFRACAVIKGDLEGLQVHGL 401

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
            +K+    ++ VA  ++DMYGKCG + +A  +F ++    +V WNAII+ H  +G  +K 
Sbjct: 402 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 461

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMV 592
           L+ F  ML  G+ PD  T+ S+L AC+    ++ G   +  +++   G+   +     ++
Sbjct: 462 LSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALI 519

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSEN 650
           D++ + G +  A      +  +   S W A++    +    E       ++ E  VD +N
Sbjct: 520 DMYSKCGMMEKAEKLHDRLAEQTVVS-WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578

Query: 651 VGYYVLM 657
             Y  ++
Sbjct: 579 FTYATIL 585


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 249/758 (32%), Positives = 411/758 (54%), Gaps = 58/758 (7%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYVRC 123
           L   +++  +++   SS+  +  YA  G L  +R  FD   + +R V +WN+M++ Y   
Sbjct: 9   LRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEA 68

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
            +  EA+  F +                     RN V               W+  ++  
Sbjct: 69  RQPREALLLFEKMPQ------------------RNTVS--------------WNGLISG- 95

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
               + + G+ + AR++FD MP R+  SW +M+ GY ++G+  EA  +   M  + V   
Sbjct: 96  ----HIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSW 151

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            + +  +L    R D+          +     E ++    N+I  Y + G +  A  +FD
Sbjct: 152 TVMLGGLLQE-GRVDDARK-------LFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFD 203

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           +M +R+VV+W ++++ Y ++     A   F  M +          VS T+++  L    +
Sbjct: 204 EMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER-------NEVSWTAML--LGYTHS 254

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R      +     ++ V++ N ++  +   G ++ A  VF+G+  +D  +W+ +I  Y 
Sbjct: 255 GRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYE 314

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           + G   EA+ +F+ M+    +  N  + +S+L     + +L  G ++HA+++++    D+
Sbjct: 315 RKGYELEALGLFRRMQR-EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDL 373

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
           +VA+ L+ MY KCG +  A  +F + P    V WN++I+ +  HG G++ALN F  M   
Sbjct: 374 YVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSS 433

Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           GV PD +TF+ +L+ACS+SG V EG   F  M+ ++ ++P ++HY C+VDL GRA  +  
Sbjct: 434 GVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNE 493

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYAN 663
           A   ++ MP+ PDA +WGALLGACR H  ++L  VA ++L +++ +N G YVL+SN+YA 
Sbjct: 494 AMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAY 553

Query: 664 VGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTA 722
            G+W  V+ +R   + R + K PG S IEV  KV +F  G+ + HP+   I   L  L  
Sbjct: 554 KGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGG 613

Query: 723 KMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGD 782
            ++  GY PD SFVL DV+E+EK H L  HSE+LA+A+G++  P   PI++ KNLRVCGD
Sbjct: 614 LLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGD 673

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  K I+++T REII+RD+NRFHHFKDG CSC DYW
Sbjct: 674 CHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 13/193 (6%)

Query: 41  LENESREIDFDDLFQ------SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           ++ E   ++F  L        S   L H K++HA LV S   + ++ ++ L+  Y   G+
Sbjct: 329 MQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGN 388

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L  ++  F+    ++V  WNSMI+ Y + G   EA++ F+    +SG+ PD  TF  VL 
Sbjct: 389 LVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMC-SSGVPPDDVTFIGVLS 447

Query: 155 ACR---NLVDGKKIHCSV-LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DS 209
           AC     + +G ++  ++  K   E  +   A L+ +  R    N A KL + MP+  D+
Sbjct: 448 ACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDA 507

Query: 210 GSWNAMISGYCQS 222
             W A++ G C++
Sbjct: 508 IVWGALL-GACRT 519


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/779 (33%), Positives = 421/779 (54%), Gaps = 13/779 (1%)

Query: 49  DFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           D   L    T L   +++H  ++ SG    +F S  L++ YA L     +    D +  R
Sbjct: 17  DLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRR 76

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
           N  +WN++I    + G    ++  F+Q  L  G  PD   F  ++KA   + +G+ +   
Sbjct: 77  NAVSWNAVIRANAQAGDFPRSL-LFFQRMLQDGSVPDAVVFLSLIKAPGTIQEGEIVQDF 135

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
             K GF+    V  +L+ MY R G  + A+  FD +  R   SWNA+I+ Y +     ++
Sbjct: 136 AKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQS 195

Query: 229 LDILDEMRLEGVSMDPITVASILPVCA--RSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           L +  EM L+G++ + +T+  I    A   +     G LIH   +  GL     V+N++I
Sbjct: 196 LRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSII 255

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           N++ + G +  A  +F+++ +RDV SWN++IAA+ ++     A   +  M    I+PD +
Sbjct: 256 NLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT---IRPDGV 312

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T V++       +D     S+H      G +  D+I+  A+V MY + G ++ A  VF  
Sbjct: 313 TFVNVLEACDCPDDLERGESIHRDARAHG-YDSDLIVATALVSMYRRCGRLDRAAEVFAA 371

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +    VI+ N +I  +AQ G A  ++  F+ M +   I P++ T V++L A +  GA   
Sbjct: 372 IQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLG-IRPSKFTLVAVLGACATSGAAAS 430

Query: 467 GIK-IH---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
             + +H   A    +C   D+ V   LV+MY KCG +D A  +F   P+ +   WNAI++
Sbjct: 431 AGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMA 490

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG  D A+    +M   G+ PD I+F + L+A SH+  V +G R F+ +  ++G+ 
Sbjct: 491 GYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLI 550

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HYG +VDL GRAG L  A  F+++M +  DA+ W ALLGACRIH + +    A++ 
Sbjct: 551 PSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEA 610

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           +  +D  +   Y ++SN+Y+  G+W+  +E+R    + G +K PG S IEV N+V  F  
Sbjct: 611 IVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAV 670

Query: 703 GNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
            +R+HP+  +IY+ L  L   +KS   YVPD   VL DVE++ +E++L  HSE+LA+ FG
Sbjct: 671 KDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFG 730

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +I +   S I I KNLR+C DCH   K  S+ T+REI+VRD  RFHHF  G CSC D W
Sbjct: 731 LIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 268/758 (35%), Positives = 413/758 (54%), Gaps = 14/758 (1%)

Query: 64   KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
            K +H   V  G    V     L+  Y +LG +  +   F  +  ++  +W +MIS Y + 
Sbjct: 318  KEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKN 377

Query: 124  GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFV 180
            G   +A++ +    L + + PD  T    L AC     L  G K+H      GF   V V
Sbjct: 378  GFPDKALEVYALMELHN-VNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVV 436

Query: 181  AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            A +LL MY +    + A ++F  M  +D  SW++MI+G+C +  + +AL     M L  V
Sbjct: 437  ANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHV 495

Query: 241  SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
              + +T  + L  CA +  + SG  IH Y+++ G+    +V N L+++Y K G   +A  
Sbjct: 496  KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 555

Query: 301  VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
             F    E+DVVSWN +++ +        A   F  M    +    +   S  +  A L  
Sbjct: 556  QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGR 613

Query: 361  CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
                  +H     +G F+  V++ NA+++MYAK   I+ A  VF+ +  KDV+SW+++I 
Sbjct: 614  LDVGIKLHELAQNKG-FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIA 672

Query: 421  GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
            G+  N  + +A+  F+ M     + PN  T+++ L A +  GALR G +IHA V++  + 
Sbjct: 673  GFCFNHRSFDALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIG 730

Query: 481  FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             + +V   L+D+Y KCG+   A + F        V WN ++S    HG GD AL+ F QM
Sbjct: 731  SEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQM 790

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
            ++ G  PD +TFV L+ ACS +G+V +G   FH   E+F I P+LKHY CMVDL  R G 
Sbjct: 791  VEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGK 849

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A+N I  MP++PDA++WGALL  CRIH ++ELG +A+  + E++  +V Y+VL+ ++
Sbjct: 850  LTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDL 909

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            Y + GKW  V  VR   R++GL++  G S +EV      F T + +HP+ ++I   L  +
Sbjct: 910  YTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGI 969

Query: 721  TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              +MK+ G+ P +S   ++V ED+   IL  HSERLA+AFG+I++ P + I + KN   C
Sbjct: 970  YERMKACGFAPVESLEDKEVSEDD---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTC 1026

Query: 781  GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
              CH   K IS+I  REI VRD+ + H FKDG CSCGD
Sbjct: 1027 QSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 248/460 (53%), Gaps = 7/460 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           +++     G++  +   F  +  R+V++WN M+  Y + G L EA+D +Y+  L +G+RP
Sbjct: 137 MLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM-LWAGMRP 195

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D YTFP VL+ C  + D   G+++H  VL+ GF  +V V  +L+ MY + G    ARK+F
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D M + D  SWNAMI+G+ ++      L++   M    V  + +T+ S+         + 
Sbjct: 256 DGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
               +H + VK G   ++   N+LI MY   G M  A ++F +M  +D +SW ++I+ YE
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYE 375

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++  P  A   +  M+   + PD +T+ S  +  A L        +H     +G F+  V
Sbjct: 376 KNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKG-FIRYV 434

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++ NA+++MYAK   I+ A  VF+ +  KDV+SW+++I G+  N  + +A+  F+ M   
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM--L 492

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + PN  T+++ L A +  GALR G +IHA V++  +  + +V   L+D+Y KCG+   
Sbjct: 493 GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           A + F        V WN ++S    HG GD AL+ F QM+
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 235/457 (51%), Gaps = 8/457 (1%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           ++L M  RFG    A ++F  MP RD  SWN M+ GY + G   EALD+   M   G+  
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRP 195

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T   +L  C    +   G  +H ++++ G    + V N L+ MYAK G +  A +VF
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M   D +SWN++IA + ++++       F TM +  +QP+L+T+ S+T     L++  
Sbjct: 256 DGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            ++ +HGF ++RG F  DV   N+++ MY  LG +  A  +F  +  KD +SW  +I+GY
Sbjct: 316 FAKEMHGFAVKRG-FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            +NG   +A+EV+ +ME  N +NP+  T  S L A + +G L  GIK+H           
Sbjct: 375 EKNGFPDKALEVYALMELHN-VNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V VA  L++MY K   ID A+ +F  +     V W+++I+    + +   AL +FR ML 
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG 493

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
             V+P+ +TF++ L+AC+ +G +  G+   H      GI         ++DL+ + G   
Sbjct: 494 H-VKPNSVTFIAALSACAATGALRSGKE-IHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            A     ++    D   W  +L     HG   LG +A
Sbjct: 552 YAWAQF-SVHSEKDVVSWNIMLSGFVAHG---LGDIA 584



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 173/587 (29%), Positives = 282/587 (48%), Gaps = 31/587 (5%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +HA ++  G    V     LV  YA  GD+  +R  FD ++  +  +WN+MI+ +   
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFEN 276

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
                 ++ F    L + ++P+  T   V  A   L +    K++H   +K GF  DV  
Sbjct: 277 HECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAF 335

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             SL+ MY   G    A K+F  M  +D+ SW AMISGY ++G   +AL++   M L  V
Sbjct: 336 CNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNV 395

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           + D +T+AS L  CA    +  G+ +H      G    + V+N L+ MYAK   +  A+ 
Sbjct: 396 NPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIE 455

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF  M E+DVVSW+S+IA +  ++    A  +F  M    ++P+ +T ++  S  A    
Sbjct: 456 VFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGA 514

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            R+ + +H +++R G   E   + NA++D+Y K G  + A A F     KDV+SWN +++
Sbjct: 515 LRSGKEIHAYVLRCGIGSEG-YVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI--------LPAYSHVGALRQGIKIHA 472
           G+  +GL   A+ +F           NQ  Y S+        L A + +G L  GIK+H 
Sbjct: 574 GFVAHGLGDIALSLF-----------NQMMYTSLGRMGACSALAACACLGRLDVGIKLHE 622

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
                     V VA  L++MY K   ID A+ +F  +     V W+++I+    + +   
Sbjct: 623 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFD 682

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           AL +FR ML   V+P+ +TF++ L+AC+ +G +  G+   H      GI         ++
Sbjct: 683 ALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKE-IHAYVLRCGIGSEGYVPNALL 740

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
           DL+ + G    A     ++    D   W  +L     HG   LG +A
Sbjct: 741 DLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHG---LGDIA 783



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 200/419 (47%), Gaps = 8/419 (1%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           +A +   C  G   +AL +L+         D     ++  +C     + +G+        
Sbjct: 68  SAALRALCSHGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADA 124

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
               F L + N +++M  +FG + HA RVF +M ERDV SWN ++  Y +      A   
Sbjct: 125 EHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           +  M  AG++PD+ T   +      + D R  R VH  ++R G F ++V + NA+V MYA
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFG-FGDEVDVLNALVTMYA 243

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G I +A  VF+G+ + D ISWN +I G+ +N      +E+F  M E NE+ PN  T  
Sbjct: 244 KCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLE-NEVQPNLMTIT 302

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S+  A   +  +    ++H   +K     DV     L+ MY   GR+ DA  +F ++   
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
            ++ W A+IS +  +G  DKAL  +  M    V PD +T  S L AC+  G +  G +  
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIK-L 421

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL-GACRIH 630
           H + +  G   ++     +++++ ++ H+  A    + M  + D   W +++ G C  H
Sbjct: 422 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNH 479


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/616 (38%), Positives = 363/616 (58%), Gaps = 18/616 (2%)

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI--- 270
           ++ S  C  G    AL +L ++   GV  DP+++  ++ +C R   +  G  IH ++   
Sbjct: 36  SIFSRLCLDGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLC 95

Query: 271 ---VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP- 326
                     +LFVSN+L++MYAKFGM+  AL +F  M +R+VVSW +++AA   +N P 
Sbjct: 96  AHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAAL--ANAPG 153

Query: 327 --ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A  F   M++ G+  +  T    +S++          ++H  I++ G    DV + 
Sbjct: 154 RKKEALRFLVEMRRDGVAANSYTF---SSVLGACGTPGVLAAMHADIIKVG-LDSDVFVR 209

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           ++++D Y KLG ++S   VF+ +   D++ WN++I G+AQ+G    A+E+F  M+E   +
Sbjct: 210 SSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFL 269

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
             NQGT  S+L A + +  L  G ++HA V+K     D+ +   L+DMY KCG + DA +
Sbjct: 270 -ANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADA 326

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           LF ++     + W+ +IS    +G+  +AL  F  M  EG  P++IT V +L ACSH+GL
Sbjct: 327 LFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGL 386

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V +G  YF  M + FGI+P  +H  CMVDL GRAG L  A  FI  M   PD+ IW  LL
Sbjct: 387 VEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACR+H N  L + A+  + +++ E+ G  +L+SNIYA++ +W   ++     RD+G+KK
Sbjct: 447 GACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKK 506

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG S IE+   V +F  G  +HP  ++I  EL  L  + K LGYVP   FVLQD+  ++
Sbjct: 507 EPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQ 566

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KE +L  HSE+LAIAFG ++S    P++I KNLR+CGDCH + K +S+   + II+RD  
Sbjct: 567 KEDLLKYHSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPV 626

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF+ G+CSCGDYW
Sbjct: 627 RFHHFQHGVCSCGDYW 642



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 185/380 (48%), Gaps = 31/380 (8%)

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC-GRLSEAVDCFYQF 136
           ++F S  LV+ YA  G L  +   F  +  RNV +W ++++      GR  EA+    + 
Sbjct: 106 SLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEM 165

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
               G+  + YTF  VL AC        +H  ++K+G + DVFV +SL+  Y + G  + 
Sbjct: 166 R-RDGVAANSYTFSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
            R +FD+M   D   WN++I+G+ QSG+ V A+++   M+  G   +  T+ S+L  C  
Sbjct: 225 GRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG 284

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G  +H +++K+  + +L + N L++MY K G +  A  +F +M +RDV+SW+++
Sbjct: 285 MVMLEVGRQVHAHVLKY--DRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTM 342

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+   Q+   + A   F  M+  G  P+ +T+V +      L  C      H  ++  GW
Sbjct: 343 ISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGV------LFACS-----HAGLVEDGW 391

Query: 377 FM---EDVIIG--------NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG--- 421
                 D + G        N +VD+  + G ++ A      +  + D + W TL+     
Sbjct: 392 HYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRM 451

Query: 422 YAQNGLAS-EAIEVFQMMEE 440
           +    LAS  A E+ ++  E
Sbjct: 452 HKNATLASYAATEILKLEPE 471



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 11/321 (3%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  +  +C     +  +HA ++  G    VF  + L++ Y  LGDL   R  FD +   +
Sbjct: 177 FSSVLGACGTPGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCD 236

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           +  WNS+I+ + + G    A++ F +    SG   +  T   VL+AC  +V    G+++H
Sbjct: 237 LVVWNSIIAGFAQSGDGVGAMELFMRMK-ESGFLANQGTLTSVLRACTGMVMLEVGRQVH 295

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             VLK  ++ D+ +  +LL MYC+ G    A  LF  M  RD  SW+ MISG  Q+G +V
Sbjct: 296 AHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSV 353

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNL 285
           EAL + D M+ EG + + IT+  +L  C+ +  +  G      + K  G++      N +
Sbjct: 354 EALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCM 413

Query: 286 INMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP- 343
           +++  + G +  A++   +M  E D V W +++ A     +   A   +   +   ++P 
Sbjct: 414 VDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLAS--YAATEILKLEPE 471

Query: 344 DLLTLVSLTSIVAQLNDCRNS 364
           D    + L++I A L    N+
Sbjct: 472 DQGARILLSNIYADLRQWSNA 492


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/567 (40%), Positives = 347/567 (61%), Gaps = 6/567 (1%)

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S ++  GL +H +I+K GL+    +S++LIN Y+K  +   +L++F     +   +W+S+
Sbjct: 33  SRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSV 92

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+++ Q++ P+ +  +F  M + G+ PD     S T     L+    ++ +H F ++  +
Sbjct: 93  ISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAY 152

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + D+ +G++V+DMYAK G I  A  VF+ +P ++V+SW+ LI GY Q G   E++ +F+
Sbjct: 153 HL-DIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFK 211

Query: 437 --MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
             ++EE NE   N  T  S+L        L+ G  IH    K       FVA+ L+ +Y 
Sbjct: 212 RFLVEEENE-GVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYS 270

Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFV 553
           KCG +++A  +F +V   +   WNA++     H   DK    F +M    G++ + ITF+
Sbjct: 271 KCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFL 330

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L ACSH+GLV +G+ YF +M++ +GI+P  +HY  MVDL GRAG L  A   I+ MP+
Sbjct: 331 CVLYACSHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPM 389

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            P  S+WGALL  CR+HGN +L +  +DR+ E+ S + G +V++SN YA  G+WE   + 
Sbjct: 390 EPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKA 449

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R + RDRG+KK  G S +E  N++  F  G+R+H K  +IYD+L  L  +M   GYV D 
Sbjct: 450 RKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADT 509

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
           SFVL++V+ +EK   +  HSERLAIAFG I+ P   PI++ KNLRVCGDCH   KFIS+ 
Sbjct: 510 SFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKC 569

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T R IIVRD+NRFH F+DG C+CGDYW
Sbjct: 570 TGRVIIVRDNNRFHRFEDGKCTCGDYW 596



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 217/443 (48%), Gaps = 26/443 (5%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
           L   R+L  G ++H  ++KLG +    ++  L++ Y +  L   + ++F D P + + +W
Sbjct: 30  LTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTW 89

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL----LIHL 268
           +++IS + Q+   + +L+    M  +GV  D      I P   +S  ILS L    ++H 
Sbjct: 90  SSVISSFAQNDLPLLSLNYFRLMLRQGVPPDD----HIFPSATKSCGILSSLPVAKMLHC 145

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           + +K     ++FV +++I+MYAK G + +A  VFD+M  R+VVSW+ +I  Y Q  +   
Sbjct: 146 FALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDE 205

Query: 329 A----HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +      F    +  G+     TL S+  +       +  R +HG   +   F     + 
Sbjct: 206 SLRLFKRFLVEEENEGVND--FTLSSVLRVCGGSTLLQMGRLIHGLSFKTS-FDSSCFVA 262

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           ++++ +Y+K G++  A  VFE + V+++  WN ++   AQ+    +  E+F  M+    +
Sbjct: 263 SSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGM 322

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVDMYGKCGRID 500
             N  T++ +L A SH G + +G K +  ++K+   + +   T     +VD+ G+ G+++
Sbjct: 323 KANFITFLCVLYACSHAGLVEKG-KYYFELMKD---YGIEPGTQHYSTMVDLLGRAGKLN 378

Query: 501 DAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           DA+ L  ++P   +   W A+++   +HG   K  ++    + E         V L  A 
Sbjct: 379 DAVKLIEEMPMEPTESVWGALLTGCRLHGN-TKLASYVADRVSELGSVSSGLHVMLSNAY 437

Query: 560 SHSGLVSEGQRYFHMMQEEFGIK 582
           + +G   E  +   MM++  GIK
Sbjct: 438 AAAGRWEEAAKARKMMRDR-GIK 459



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 203/422 (48%), Gaps = 31/422 (7%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LHA ++  G       S  L+NFY+       S   F    +++  TW+S+IS + +  
Sbjct: 41  QLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQND 100

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
               +++ +++  L  G+ PD + FP   K+C    +L   K +HC  LK  +  D+FV 
Sbjct: 101 LPLLSLN-YFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVG 159

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL--EG 239
           +S++ MY + G    A  +FD+MP R+  SW+ +I GY Q G   E+L +     +  E 
Sbjct: 160 SSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEEN 219

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             ++  T++S+L VC  S  +  G LIH    K   + + FV+++LI++Y+K G++  A 
Sbjct: 220 EGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAY 279

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQL 358
            VF+++  R++  WN+++ A  Q          F  M+   G++ + +T + +      L
Sbjct: 280 DVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCV------L 333

Query: 359 NDCRNSRSVHGFIMRRGWF----MEDVIIG------NAVVDMYAKLGIINSACAVFEGLP 408
             C      H  ++ +G +    M+D  I       + +VD+  + G +N A  + E +P
Sbjct: 334 YACS-----HAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMP 388

Query: 409 VKDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           ++   S W  L+TG   +G    A  V   + E   +  + G +V +  AY+  G   + 
Sbjct: 389 MEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSV--SSGLHVMLSNAYAAAGRWEEA 446

Query: 468 IK 469
            K
Sbjct: 447 AK 448



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 140/284 (49%), Gaps = 17/284 (5%)

Query: 51  DDLFQSCTK-------LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           D +F S TK       L   K LH   + +     +F  + +++ YA  GD+ ++ + FD
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL---TSGLRPDFYTFPPVLKACRN-- 158
            + YRNV +W+ +I  YV+ G   E++  F +F +     G+    +T   VL+ C    
Sbjct: 181 EMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVND--FTLSSVLRVCGGST 238

Query: 159 -LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
            L  G+ IH    K  F+   FVA+SL+ +Y + G+   A  +F+++ VR+ G WNAM+ 
Sbjct: 239 LLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLI 298

Query: 218 GYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
              Q  +  +  ++ D+M+ + G+  + IT   +L  C+ +  +  G      +  +G+E
Sbjct: 299 ACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIE 358

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
                 + ++++  + G +  A+++ ++M ME     W +++  
Sbjct: 359 PGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTG 402


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/794 (32%), Positives = 412/794 (51%), Gaps = 72/794 (9%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
            +HA L+  G    V  S  L+N Y     +  +   FD    +  + WN+++   +R  
Sbjct: 152 EVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSE 211

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
           R  +A++   +    S    D  T   +L+AC   R L +GK+IH  V++ G   +  + 
Sbjct: 212 RWEDALELSRRMQSASAKATDG-TIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSIC 270

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            S++ MY R     +AR +FD     +  SWN++IS Y  +G    A D+  EM    + 
Sbjct: 271 NSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIK 330

Query: 242 MDPITVASILP---VCARSDNILS--------------------------------GLLI 266
            D IT  S+L    +    +N+L+                                G  I
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEI 390

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H YI++  LE++++V  +L++MY K   +  A  VF     +++ +WNS+I+ Y      
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLF 450

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A      M++ GI+ DL+T  SL S               G+ M  G   E +    A
Sbjct: 451 DNAEKLLIQMKEEGIKADLVTWNSLVS---------------GYSMS-GCSEEAL----A 490

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           V++    LG+              +V+SW  +I+G  QN   ++A++ F  M+E N + P
Sbjct: 491 VINRIKSLGL------------TPNVVSWTAMISGCCQNENYTDALQFFSQMQEEN-VKP 537

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N  T  ++L A +    L++G +IH   +K+    D+++AT L+DMY K G++  A  +F
Sbjct: 538 NSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVF 597

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +   +   WN ++  + I+G G++    F  M   G+RPD ITF +LL+ C +SGLV 
Sbjct: 598 RNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVM 657

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G +YF  M+ ++ I P ++HY CMVDL G+AG L  A +FI  MP + DASIWGA+L A
Sbjct: 658 DGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAA 717

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR+H ++++  +A+  LF ++  N   YVLM NIY+   +W  V+ ++      G+K   
Sbjct: 718 CRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPN 777

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
            WS I+V   + +F T  ++HP+  +IY +L  L +++K LGYVPD + V Q++++ EKE
Sbjct: 778 VWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKE 837

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
            +L SH+E+LA+ +G++     +PI++ KN R+C DCH   K+IS    REI +RD  RF
Sbjct: 838 KVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRF 897

Query: 807 HHFKDGICSCGDYW 820
           HHF +G CSC D W
Sbjct: 898 HHFMNGECSCNDRW 911



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/614 (24%), Positives = 270/614 (43%), Gaps = 74/614 (12%)

Query: 60  LHHVKRLHALLV-VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           L+ V+ LHA ++ +  K   V     ++  Y   GD   +   F     RN   WNS + 
Sbjct: 44  LNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLE 103

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFE 175
            +   G  S  +   ++     G++ D      VLK C  L++   G ++H  +LK GF+
Sbjct: 104 EFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQ 163

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
            DV ++ +L+++Y +    + A ++FD+ P+++   WN ++    +S    +AL++   M
Sbjct: 164 VDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRM 223

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           +         T+  +L  C +   +  G  IH Y+++ G   N  + N++++MY++   +
Sbjct: 224 QSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRL 283

Query: 296 RHALRVFDQMMERDVVSWNSIIAAY----------------EQSN---DPITAHGFFT-- 334
             A  VFD   + ++ SWNSII++Y                E S+   D IT +   +  
Sbjct: 284 ELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGH 343

Query: 335 --------------TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
                         ++Q AG +PD  ++ S    V +L      + +HG+IMR      D
Sbjct: 344 LLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSK-LEYD 402

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           V +  ++VDMY K   +  A  VF     K++ +WN+LI+GY   GL   A ++   M+E
Sbjct: 403 VYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKE 462

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
              I  +  T+ S++  YS  G   + + +  R+    L  +V                 
Sbjct: 463 -EGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNV----------------- 504

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
                         V W A+IS    +     AL FF QM +E V+P+  T  +LL AC+
Sbjct: 505 --------------VSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACA 550

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
              L+ +G+   H    + G    +     ++D++ + G L +AH   +N+  +     W
Sbjct: 551 GPSLLKKGEE-IHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKT-LPCW 608

Query: 621 GALLGACRIHGNME 634
             ++    I+G+ E
Sbjct: 609 NCMMMGYAIYGHGE 622


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/594 (39%), Positives = 353/594 (59%), Gaps = 44/594 (7%)

Query: 264 LLIHLYIVKHGLEFNL---FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
           L IH  I++H L  +     ++  L   YA  G +RH+L +F Q ++ D+  + + I   
Sbjct: 44  LQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTA 103

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC--RNSRSVHGFIMRRGWFM 378
             +     A   +  +  + I P+  T  S+      L  C  ++ + +H  +++ G  +
Sbjct: 104 SINGLKDQAFLLYVQLLSSQINPNEFTFSSI------LKSCSTKSGKLIHTHVLKFGLGL 157

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVK---------------------------- 410
            D  +   +VD+YAK G + SA  VF+ +P +                            
Sbjct: 158 -DPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRM 216

Query: 411 ---DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
              D++SWN +I GY+Q+G  S+A+ +FQ +    +  P++ T V+ L A S +GAL  G
Sbjct: 217 CERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETG 276

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             IH  V  + +  +V V T L+DMY KCG +++A+ +F   PR   V WNA+I+ + +H
Sbjct: 277 RWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMH 336

Query: 528 GQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           G    AL  F +M    G++P  ITF+  L AC+H+GLV+EG + F  M +E+GIKP ++
Sbjct: 337 GYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIE 396

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HYGC+V L GRAG L  A+  I+NM +  D+ +W ++LG+C++HG   LG   ++ L   
Sbjct: 397 HYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQ 456

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           +  N G YVL+SNIYA VG +EGV +VR+L +++G+ K PG S+IE++NKV  F  G+R 
Sbjct: 457 NISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDRE 516

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           H K ++IY  LR ++ ++KS GYVP+ + VL D+EE EKE  L  HSERLAIA+G+IS+ 
Sbjct: 517 HLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTK 576

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P SP++IFKNLRVC DCH  TK IS+IT R+I++RD NRFHHF DG CSC D+W
Sbjct: 577 PGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 39/324 (12%)

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           ++ +  T +SIL  C+      SG LIH +++K GL  + +V+  L+++YAK G +  A 
Sbjct: 124 INPNEFTFSSILKSCSTK----SGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQ 179

Query: 300 RV-------------------------------FDQMMERDVVSWNSIIAAYEQSNDPIT 328
           +V                               FD+M ERD+VSWN +I  Y Q   P  
Sbjct: 180 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSD 239

Query: 329 AHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
           A   F  +   G  +PD +T+V+  S  +Q+      R +H F+        +V +  A+
Sbjct: 240 ALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFV-NSSRIRLNVKVCTAL 298

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMY+K G +  A  VF   P KD+++WN +ITGYA +G + +A+ +F  M+    + P 
Sbjct: 299 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPT 358

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
             T++  L A +H G + +GI+I   + +   +   +    CLV + G+ G++  A  + 
Sbjct: 359 DITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEII 418

Query: 507 YQVP-RSSSVPWNAIISCHGIHGQ 529
             +   + SV W++++    +HG+
Sbjct: 419 KNMNMEADSVLWSSVLGSCKLHGE 442



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 35/299 (11%)

Query: 84  KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
           KL   YA+ G +  S   F      +++ + + I+     G   +A   + Q  L+S + 
Sbjct: 67  KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL-LSSQIN 125

Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           P+ +TF  +LK+C +   GK IH  VLK G   D +VA  L+ +Y + G    A+K+FD 
Sbjct: 126 PNEFTFSSILKSC-STKSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDR 184

Query: 204 MPVR-------------------------------DSGSWNAMISGYCQSGNAVEALDIL 232
           MP R                               D  SWN MI GY Q G   +AL + 
Sbjct: 185 MPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLF 244

Query: 233 DEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
            ++  +G    D ITV + L  C++   + +G  IH+++    +  N+ V   LI+MY+K
Sbjct: 245 QKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSK 304

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLV 349
            G +  A+ VF+    +D+V+WN++I  Y        A   F  MQ   G+QP  +T +
Sbjct: 305 CGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFI 363



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 126/249 (50%), Gaps = 6/249 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +++ SST ++  YA  G++  +R  FD +  R++ +WN MI  Y + G  S+A+  F + 
Sbjct: 188 RSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKL 247

Query: 137 TLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
                 +PD  T    L AC     L  G+ IH  V       +V V  +L+ MY + G 
Sbjct: 248 LADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGS 307

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILP 252
              A  +F+D P +D  +WNAMI+GY   G + +AL + DEM+ + G+    IT    L 
Sbjct: 308 LEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQ 367

Query: 253 VCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            CA +  +  G+ I   +  ++G++  +     L+++  + G ++ A  +   M ME D 
Sbjct: 368 ACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADS 427

Query: 311 VSWNSIIAA 319
           V W+S++ +
Sbjct: 428 VLWSSVLGS 436


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/691 (37%), Positives = 383/691 (55%), Gaps = 14/691 (2%)

Query: 142 LRPDFYTFPPVLKAC-------RNLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCRFGL 193
           +RP     P +L A        R+   G+  H   L+L       F+ A L+++Y +  L
Sbjct: 1   MRPAAAADPQLLGAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDL 60

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL-- 251
              A       P     S+ A ISG  Q    + AL     M   G+  +  T  S    
Sbjct: 61  PAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKA 120

Query: 252 PVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
             CA       G  IH   ++ G L  + FVS   ++MY K G +  A R+F++M  R+V
Sbjct: 121 AACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNV 180

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           ++WN+++        P+     +  +++AG  P+++++ +  +  A           HGF
Sbjct: 181 IAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGF 240

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           ++  G+ M DV + NA+VD Y K      A AVF+G+ V++ +SW ++I  YAQ+G   +
Sbjct: 241 VVTCGFDM-DVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEED 299

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A+ V+       E  P      S+L   + +  L  G  +HA  +++C+  ++FVA+ LV
Sbjct: 300 ALAVYMGARNTGE-EPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALV 358

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDH 549
           DMYGKCG ++DA  +F  +P  + V WNA+I  +   G    AL  F  M+  G   P+H
Sbjct: 359 DMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNH 418

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           IT V+++TACS  GL  +G   F  M+E FG++P  +HY C+VDL GRAG    A+  IQ
Sbjct: 419 ITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQ 478

Query: 610 NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEG 669
            MP+RP  S+WGALLGAC++HG  ELG +AS++LFE+D ++ G +VL+SN+ A+ G+W  
Sbjct: 479 RMPMRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAE 538

Query: 670 VDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGY 729
             +VR   ++ G+KK PG S I   N V +FY  +  H +  +I   L  L  +M++ GY
Sbjct: 539 ATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGY 598

Query: 730 VPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
           +PD  + L DVEE+EKE  +  HSE+LA+AFG+I  PP  PI+I KNLR+C DCH   KF
Sbjct: 599 MPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKF 658

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S I  REIIVRD+NRFH+FK   CSC DYW
Sbjct: 659 VSGIVGREIIVRDNNRFHYFKQFECSCKDYW 689



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 226/484 (46%), Gaps = 17/484 (3%)

Query: 59  KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
           +L       AL ++S  +   F    LVN Y+ L   + +           V ++ + IS
Sbjct: 26  RLGRAAHARALRLLSPGLPP-FICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFIS 84

Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC-----RNLVDGKKIHCSVLKLG 173
              +  R   A+  F    L  GLRP+ +TFP   KA      R    G +IH   L+ G
Sbjct: 85  GAAQHARPLAALSAFAAM-LRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFG 143

Query: 174 F-EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           +   D FV+ + + MY + G   +AR+LF++MP R+  +WNA+++     G  +E     
Sbjct: 144 YLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAY 203

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             +R  G   + ++V +    CA +  +  G   H ++V  G + ++ VSN +++ Y K 
Sbjct: 204 FGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKC 263

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
                A  VFD M  R+ VSW S+I AY Q      A   +   +  G +P    + S+ 
Sbjct: 264 RCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVL 323

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           +  A L      R++H  +  R     ++ + +A+VDMY K G +  A  VF  +P +++
Sbjct: 324 TTCAGLLGLNFGRALHA-VAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNL 382

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++WN +I GYA  G A  A+ VF  M      +PN  T V+++ A S  G  + G ++  
Sbjct: 383 VTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFD 442

Query: 473 RVIKNCLCFDVFVAT----CLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
            + +    F V   T    C+VD+ G+ G  + A  +  ++P   S+  W A++    +H
Sbjct: 443 TMRER---FGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMH 499

Query: 528 GQGD 531
           G+ +
Sbjct: 500 GKTE 503



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 9/190 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L+  + LHA+ V S     +F ++ LV+ Y   G +  +   F  +  RN+ TWN+MI  
Sbjct: 332 LNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGG 391

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL-KLGFE 175
           Y   G    A+  F     + G  P+  T   V+ AC       DG ++  ++  + G E
Sbjct: 392 YAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVE 451

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALDILDE 234
                 A ++ +  R G+   A ++   MP+R S S W A++ G C+     E   I  E
Sbjct: 452 PRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALL-GACKMHGKTELGRIASE 510

Query: 235 MRLEGVSMDP 244
              E   +DP
Sbjct: 511 KLFE---LDP 517


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 254/674 (37%), Positives = 376/674 (55%), Gaps = 46/674 (6%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL-HMYCRFGLA-NVARKLFDDMPVRDS 209
           +L  CR+L + K++H  V K G + D  +A  LL H       A + AR+LF   P  D 
Sbjct: 11  LLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDV 70

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHL 268
              N +I G  +S     +L    EMR      +D  + A +L   A   ++ SG+ +H 
Sbjct: 71  FMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHC 130

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
             + HGL+ +LFV   L++MY++ G +  A +VF++M E +VV+WN+++ A  +  D   
Sbjct: 131 QAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKG 190

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M             +LTS                      W        N ++
Sbjct: 191 ADMMFNRM----------PFRNLTS----------------------W--------NVML 210

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
             Y K G +  A  +F  +PVKD +SW+T+I G+A NG   EA   F+ +++   + PN+
Sbjct: 211 AGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVG-MRPNE 269

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
            +    L A +  GA+  G  +H  + K+   + V V   L+D Y KCG +  A  +F +
Sbjct: 270 VSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFER 329

Query: 509 VPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           +P   S V W ++I+   +HG G++A+  F +M + G+RPD I F+S+L ACSH+GL+ +
Sbjct: 330 MPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEK 389

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G  YF+ M++ + I+P ++HYGCMVDL+GRAG L  A+ FI +MPV P A IW  LLGAC
Sbjct: 390 GYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGAC 449

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
            IHGN++L     +RL E+D  N G +VL+SNIYA  GKW+ V  VR    D+ + KTPG
Sbjct: 450 SIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPG 509

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG-YVPDKSFVLQDVEEDEKE 746
           WS IEV+  +  F  G   +   E+ Y++L+ +  K++  G Y+P+   VL D+E++EKE
Sbjct: 510 WSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKE 569

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
             ++ HSE+LA+AFGI      S I+I KNLRVC DCH   K IS++   EI+VRD +RF
Sbjct: 570 DSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRF 629

Query: 807 HHFKDGICSCGDYW 820
           H FK G CSC DYW
Sbjct: 630 HSFKTGSCSCRDYW 643



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 189/412 (45%), Gaps = 65/412 (15%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH   +V G    +F  T LV+ Y+  G ++F++  F+ +   NV  WN++++   RCG
Sbjct: 127 QLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG 186

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASL 184
            +  A   F +                     RNL                W+V +A   
Sbjct: 187 DVKGADMMFNRMPF------------------RNLTS--------------WNVMLAG-- 212

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
              Y + G   +ARKLF +MPV+D  SW+ MI G+  +G   EA     E++  G+  + 
Sbjct: 213 ---YTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNE 269

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +++   L  CA +  I  G ++H +I K G  + + V+N L++ Y+K G +  A  VF++
Sbjct: 270 VSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFER 329

Query: 305 MME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
           M E R +VSW S+IA          A   F  M+++GI+PD +  +S+      L  C  
Sbjct: 330 MPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISI------LYACS- 382

Query: 364 SRSVHGFIMRRG----WFMEDVI-IGNAV------VDMYAKLGIINSACAVFEGLPV-KD 411
               H  ++ +G    + M+D+  I  A+      VD+Y + G ++ A      +PV   
Sbjct: 383 ----HAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPT 438

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ-GTYVSILPAYSHVG 462
            I W TL+   + +G    A  V    E  +E++PN  G +V +   Y+  G
Sbjct: 439 AIIWRTLLGACSIHGNVKLAERV---KERLSELDPNNSGDHVLLSNIYAVAG 487



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/345 (20%), Positives = 140/345 (40%), Gaps = 62/345 (17%)

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL-GIINSACAVFEGLPVK 410
           +S++      +N + VH ++ + G   + +I G  ++     +   ++ A  +F   P  
Sbjct: 9   SSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNP 68

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           DV   NTLI G A++     ++  F  M        +  ++  +L A +   +L  GI++
Sbjct: 69  DVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQL 128

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS----CHGI 526
           H + I + L   +FV T LV MY +CG +  A  +F ++   + V WNA+++    C  +
Sbjct: 129 HCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDV 188

Query: 527 HGQG---------------------DKA--LNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            G                        KA  L   R++  E    D +++ +++   +H+G
Sbjct: 189 KGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNG 248

Query: 564 LVSEGQRYFHMMQE-----------------------EFGIKPH--LKHYG--------- 589
              E   +F  +Q+                       EFG   H  ++  G         
Sbjct: 249 FFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNN 308

Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
            ++D + + G++GMA    + MP +     W +++    +HG  E
Sbjct: 309 ALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGE 353


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/684 (34%), Positives = 386/684 (56%), Gaps = 7/684 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H L +  G    V + + LV+ Y+    L  +   F  +  RN+  W+++I+ YV+  
Sbjct: 159 QVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQND 218

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
           R  E +  F    L  G+     T+  V ++C  L     G ++H   LK  F +D  + 
Sbjct: 219 RFIEGLKLFKDM-LKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG 277

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            + L MY +    + A K+F+ +P     S+NA+I GY +    ++AL+I   ++   +S
Sbjct: 278 TATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLS 337

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D I+++  L  C+     L G+ +H   VK GL FN+ V+N +++MY K G +  A  +
Sbjct: 338 FDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTI 397

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           FD M  RD VSWN+IIAA+EQ+ + +     F +M ++ ++PD  T  S+    A     
Sbjct: 398 FDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQAL 457

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                +HG I++ G  + D  +G+A+VDMY K G++  A  + + L  K  +SWN++I+G
Sbjct: 458 NYGMEIHGRIVKSGMGL-DWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISG 516

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           ++    +  A   F  M E   I P+  TY ++L   +++  +  G +IHA+++K  L  
Sbjct: 517 FSSQKQSENAQRYFSQMLEMGVI-PDNFTYATVLDVCANMATIELGKQIHAQILKLNLHS 575

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV++A+ LVDMY KCG + D+  +F + P+   V W+A+I  +  HG G++A+  F +M 
Sbjct: 576 DVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQ 635

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
              V+P+H  F+S+L AC+H G V +G  YF +MQ  +G+ PH++HY CMVDL GR+  +
Sbjct: 636 LLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQV 695

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A   I++M    D  IW  LL  C++ GN+E+   A + L ++D ++   YVL++N+Y
Sbjct: 696 NEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVY 755

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           ANVG W  V ++RS+ ++  LKK PG S IEV ++V  F  G++ HP+ E+IY++   L 
Sbjct: 756 ANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLV 815

Query: 722 AKMKSLGYVPD-KSFVLQDVEEDE 744
            +MK  GYVPD  S + ++VEE +
Sbjct: 816 DEMKWAGYVPDIDSMLDEEVEEQD 839



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 171/640 (26%), Positives = 322/640 (50%), Gaps = 46/640 (7%)

Query: 43  NESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFY---------- 89
           N +++  F  + Q C+ L  +   K+ HA ++V+  + T++ +  LV FY          
Sbjct: 2   NPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAF 61

Query: 90  ---------------------ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
                                A +G++ F++  FD +  R+V +WNS++S Y+  G   +
Sbjct: 62  KVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRK 121

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLL 185
           +++ F +   +  +  D+ TF  VLKAC  + D   G ++HC  +++GFE DV   ++L+
Sbjct: 122 SIEIFVRMR-SLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
            MY +    + A ++F +MP R+   W+A+I+GY Q+   +E L +  +M   G+ +   
Sbjct: 181 DMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T AS+   CA       G  +H + +K    ++  +    ++MYAK   M  A +VF+ +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTL 300

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
                 S+N+II  Y + +  + A   F ++Q+  +  D ++L    +  + +       
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGI 360

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +HG  ++ G    ++ + N ++DMY K G +  AC +F+ +  +D +SWN +I  + QN
Sbjct: 361 QLHGLAVKCGLGF-NICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQN 419

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
               + + +F  M   + + P+  TY S++ A +   AL  G++IH R++K+ +  D FV
Sbjct: 420 EEIVKTLSLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFV 478

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            + LVDMYGKCG + +A  +  ++   ++V WN+IIS      Q + A  +F QML+ GV
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGV 538

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            PD+ T+ ++L  C++   +  G++  H    +  +   +     +VD++ + G++  + 
Sbjct: 539 IPDNFTYATVLDVCANMATIELGKQ-IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
              +  P R D   W A++ A   HG+ E     + +LFE
Sbjct: 598 LMFEKTPKR-DYVTWSAMICAYAYHGHGE----QAIKLFE 632



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 155/323 (47%), Gaps = 10/323 (3%)

Query: 44  ESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  +  +  + ++C     L++   +H  +V SG     F  + LV+ Y   G L  +  
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
             D +  +   +WNS+IS +    + SE    ++   L  G+ PD +T+  VL  C N+ 
Sbjct: 498 IHDRLEEKTTVSWNSIISGF-SSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMA 556

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               GK+IH  +LKL    DV++A++L+ MY + G    +R +F+  P RD  +W+AMI 
Sbjct: 557 TIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMIC 616

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLE 276
            Y   G+  +A+ + +EM+L  V  +     S+L  CA    +  GL     +  H GL+
Sbjct: 617 AYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLD 676

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
            ++   + ++++  +   +  AL++ + M  E D V W ++++  +   +   A   F +
Sbjct: 677 PHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNS 736

Query: 336 MQQAGIQPDLLTLVSLTSIVAQL 358
           + Q   Q D    V L ++ A +
Sbjct: 737 LLQLDPQ-DSSAYVLLANVYANV 758



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 46/235 (19%)

Query: 444 INPNQG-TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC------ 496
           +NP +  T+  IL   S++ AL  G + HA++I       ++VA CLV  Y K       
Sbjct: 1   MNPTKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYA 60

Query: 497 -------------------------GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
                                    G +  A SLF  +P    V WN+++SC+  +G   
Sbjct: 61  FKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNR 120

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGC 590
           K++  F +M    +  D+ TF  +L AC  SG+   G     H +  + G +  +     
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFSVVLKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSA 178

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +VD++ +   L  A    + MP R +   W A++           G V +DR  E
Sbjct: 179 LVDMYSKCKKLDGAFRIFREMPER-NLVCWSAVIA----------GYVQNDRFIE 222


>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/605 (36%), Positives = 358/605 (59%), Gaps = 50/605 (8%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAK--FGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           +H ++VK G   +  ++  ++ + A   F  + +AL VFDQ+ ER+  +WN++I A  ++
Sbjct: 34  VHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAET 93

Query: 324 NDP-ITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF---- 377
            D  + A   F  M  +A ++P+  T  S+    A +      + VHG +++ G      
Sbjct: 94  QDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEF 153

Query: 378 --------------MED----------------------------VIIGNAVVDMYAKLG 395
                         MED                            V++ N +VD YA++G
Sbjct: 154 VVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVG 213

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            + +A  +F+ +  + V+SWN +I+GYAQNG   EAIE+F  M +  ++ PN+ T VS+L
Sbjct: 214 NLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVL 273

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
           PA S +G L  G  +H    KN +  D  + + LVDMY KCG I+ A+ +F ++P+++ +
Sbjct: 274 PAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVI 333

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            WNA+I    +HG+ +   N+  +M   G+ P  +T++++L+ACSH+GLV EG+ +F+ M
Sbjct: 334 TWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDM 393

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
               G+KP ++HYGCMVDL GRAG+L  A   I NMP++PD  IW ALLGA ++H N+++
Sbjct: 394 VNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKI 453

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G  A++ L ++   + G YV +SN+YA+ G W+GV  VR + +D  ++K PG S IE++ 
Sbjct: 454 GMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDG 513

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
            +  F   + +H + + I+  L  ++ K+   G++PD + VL  ++E  KE +L  HSE+
Sbjct: 514 VIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEK 573

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           +A+AFG+IS+PPK+P+ I KNLR+C DCH+  K IS++ ER+I++RD  RFHHF+ G CS
Sbjct: 574 IAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCS 633

Query: 816 CGDYW 820
           C DYW
Sbjct: 634 CMDYW 638



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 213/447 (47%), Gaps = 59/447 (13%)

Query: 151 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRD 208
           P +KAC+++ + K++H  ++K G   D  +A  +L +       ++  A  +FD +P R+
Sbjct: 20  PQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERN 79

Query: 209 SGSWNAMISGYCQSGNA-VEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLI 266
             +WN +I    ++ +  ++AL +  +M  E  V  +  T  S+L  CA    +  G  +
Sbjct: 80  CFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQV 139

Query: 267 HLYIVKHGLEFNLFVSNNLINM-------------------------------------- 288
           H  ++K GL  + FV  NL+ M                                      
Sbjct: 140 HGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNV 199

Query: 289 ---------YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
                    YA+ G ++ A  +FD+M +R VVSWN +I+ Y Q+     A   F  M Q 
Sbjct: 200 VLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQM 259

Query: 340 G-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           G + P+ +TLVS+   +++L      + VH +  +    ++DV +G+A+VDMYAK G I 
Sbjct: 260 GDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDV-LGSALVDMYAKCGSIE 318

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VFE LP  +VI+WN +I G A +G A++       ME+C  I+P+  TY++IL A 
Sbjct: 319 KAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCG-ISPSDVTYIAILSAC 377

Query: 459 SHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
           SH G + +G      ++ +  L   +    C+VD+ G+ G +++A  L   +P +   V 
Sbjct: 378 SHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVI 437

Query: 517 WNAIISCHGIHGQ---GDKALNFFRQM 540
           W A++    +H     G +A     QM
Sbjct: 438 WKALLGASKMHKNIKIGMRAAEVLMQM 464



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 215/489 (43%), Gaps = 65/489 (13%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA- 90
           N+L   P+      R +D   + ++C  +  +K++HA LV +G+      +T+++   A 
Sbjct: 2   NALMFQPNTASYYPR-LDVPQI-KACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSAT 59

Query: 91  -NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC-GRLSEAVDCFYQFTLTSGLRPDFYT 148
            +  D+ ++   FD +  RN + WN++I        R  +A+  F Q    + + P+ +T
Sbjct: 60  SDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFT 119

Query: 149 FPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMY----------------- 188
           FP VLKAC     L +GK++H  +LK G   D FV  +LL MY                 
Sbjct: 120 FPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNV 179

Query: 189 ------------------------------CRFGLANVARKLFDDMPVRDSGSWNAMISG 218
                                          R G    AR+LFD M  R   SWN MISG
Sbjct: 180 EGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISG 239

Query: 219 YCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           Y Q+G   EA++I   M   G V  + +T+ S+LP  +R   +  G  +HLY  K+ +  
Sbjct: 240 YAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRI 299

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  + + L++MYAK G +  A++VF+++ + +V++WN++I              + + M+
Sbjct: 300 DDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRME 359

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + GI P  +T +++ S  +        RS    ++        +     +VD+  + G +
Sbjct: 360 KCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYL 419

Query: 398 NSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
             A  +   +P+K D + W  L+     +    +   A EV   M        + G YV+
Sbjct: 420 EEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAP-----HDSGAYVA 474

Query: 454 ILPAYSHVG 462
           +   Y+  G
Sbjct: 475 LSNMYASSG 483



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 152/333 (45%), Gaps = 59/333 (17%)

Query: 355 VAQLNDCRNSRS---VHGFIMRRGWFMEDVIIGNAVVDMYAKLGI--INSACAVFEGLPV 409
           V Q+  C++ R    VH F+++ G    D  I   ++ + A      I  A +VF+ LP 
Sbjct: 19  VPQIKACKSMRELKQVHAFLVKTGQ-THDNAIATEILRLSATSDFRDIGYALSVFDQLPE 77

Query: 410 KDVISWNTLITGYAQ-NGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           ++  +WNT+I   A+      +A+ VF QM+ E   + PNQ T+ S+L A + +  L +G
Sbjct: 78  RNCFAWNTVIRALAETQDRHLDALLVFCQMLSEAT-VEPNQFTFPSVLKACAVMARLAEG 136

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY-------------------- 507
            ++H  ++K  L  D FV T L+ MY  CG ++DA  LFY                    
Sbjct: 137 KQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGRE 196

Query: 508 ---------------------------QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
                                      ++ + S V WN +IS +  +G   +A+  F +M
Sbjct: 197 FNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRM 256

Query: 541 LDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           +  G V P+ +T VS+L A S  G++  G ++ H+  E+  I+        +VD++ + G
Sbjct: 257 MQMGDVLPNRVTLVSVLPAISRLGVLELG-KWVHLYAEKNKIRIDDVLGSALVDMYAKCG 315

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            +  A    + +P + +   W A++G   +HG 
Sbjct: 316 SIEKAIQVFERLP-QNNVITWNAVIGGLAMHGK 347


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/848 (31%), Positives = 441/848 (52%), Gaps = 50/848 (5%)

Query: 15  KLLPLLQAHRPLFSAAA---NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLV 71
           K   LL +H PL +  A   N   +S D + +    +D    +     +  +K +HA + 
Sbjct: 43  KPYALLTSHPPLSNQPALLSNFPSVSNDTVNDHYYLLDLSVRYDD---VELIKAVHASIF 99

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
              +   +  +  L+  Y  LG +  +   F  +S  NV ++ +MIS + +  R  +A++
Sbjct: 100 KLAE--DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAME 157

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMY 188
            F++   +SG+  + ++F  +L  C  L+D   G ++H  V+K+GF    FV+ +L+ +Y
Sbjct: 158 IFFRMR-SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLY 216

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITV 247
            + G  +   +LFD+MP RD  SWN +IS   +      A ++  +MR ++G  +D  T+
Sbjct: 217 GKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTL 276

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           ++IL V AR    + G  IH +++K G E N+ V N LI  Y K G ++H + +F++M  
Sbjct: 277 STIL-VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRV 335

Query: 308 RDVVSWNSIIAAYE-------------------------------QSNDPITAHGFFTTM 336
           RDV++W  +I AY                                Q+ +   A  FF  M
Sbjct: 336 RDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRM 395

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            + G++    TL  + +    L + + S+ +HGFI++ G F  +  I  A++DM  + G 
Sbjct: 396 VEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG-FGSNACIEAALLDMCTRCGR 454

Query: 397 INSA--CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           +  A              I W ++I GYA+N    EAI +F   +    +  ++    ++
Sbjct: 455 MADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAV 514

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L     +     G +IH   +K+    D+ V   ++ MY KC  +DDA+ +F  +P    
Sbjct: 515 LGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDI 574

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH--SGLVSEGQRYF 572
           V WN +I+ H +H QGD+AL+ + +M   G++PD +TFV +++A  H  S LV   +R F
Sbjct: 575 VSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLF 634

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             M+  + I P ++HY  +V + G  G L  A   I  MP+ P+AS+W ALL ACRIH N
Sbjct: 635 LSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSN 694

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
             +G  A+  L  +   +   Y+L+SN+Y+  G+W   D VR   R +G +K PG S I 
Sbjct: 695 TTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWII 754

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
             NKV  FY  +++HP+ + I+  L  L  +    GYVPD SFVL +VEE +K+  L  H
Sbjct: 755 HENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYH 814

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           S ++A  +G++ + P  PI+I KN+ +CGDCH + K++S +T REI +RD++  H F +G
Sbjct: 815 SAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNG 874

Query: 813 ICSCGDYW 820
            CSC DYW
Sbjct: 875 QCSCKDYW 882


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/601 (37%), Positives = 368/601 (61%), Gaps = 28/601 (4%)

Query: 242 MDPITVASIL--PVCARSDNILSGL---------LIHLYIVKHGLEFNLFVSNNLINMYA 290
           M P +  S+L  P+  +  N+L             IH + ++HG+     +S+  +  + 
Sbjct: 1   MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVS----ISDAELGKHL 56

Query: 291 KFGM--------MRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG- 340
            F +        M +A +VF ++ +  +V  WN++I  Y +  + I+A   +  M+ +G 
Sbjct: 57  IFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL 116

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++PD  T   L   V  + D R   ++H  ++R G F   + + N+++ +YA  G + SA
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASA 175

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF+ +P KD+++WN++I G+A+NG   EA+ ++  M     I P+  T VS+L A + 
Sbjct: 176 YKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAK 234

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           +GAL  G ++H  +IK  L  ++  +  L+D+Y +CGR+++A +LF ++   +SV W ++
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294

Query: 521 ISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           I    ++G G +A+  F+ M   EG+ P  ITFV +L ACSH G+V EG  YF  M+EE+
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            I+P ++H+GCMVDL  RAG +  A+ +I++MP++P+  IW  LLGAC +HG+ +L   A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414

Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
             ++ +++  + G YVL+SN+YA+  +W  V ++R      G+KK PG S +EV N+V  
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
           F  G+++HP+ + IY +L+ +T +++S GYVP  S V  DVEE+EKE+ +  HSE++AIA
Sbjct: 475 FLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIA 534

Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           F +IS+P +SPI + KNLRVC DCH   K +S++  REI+VRD +RFHHFK+G CSC DY
Sbjct: 535 FMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594

Query: 820 W 820
           W
Sbjct: 595 W 595



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 196/382 (51%), Gaps = 30/382 (7%)

Query: 95  LSFSRHTFDHISYR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
           +S++   F  I    NV+ WN++I  Y   G    A   + +  ++  + PD +T+P ++
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128

Query: 154 KACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
           KA   + D   G+ IH  V++ GF   ++V  SLLH+Y   G    A K+FD MP +D  
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           +WN++I+G+ ++G   EAL +  EM  +G+  D  T+ S+L  CA+   +  G  +H+Y+
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +K GL  NL  SN L+++YA+ G +  A  +FD+M++++ VSW S+I     +     A 
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308

Query: 331 GFFTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGF----IMRRGWFMEDVIIG 384
             F  M+   G+ P  +T V +      L  C +   V  GF     MR  + +E  I  
Sbjct: 309 ELFKYMESTEGLLPCEITFVGI------LYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362

Query: 385 -NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI---TGYAQNGLASEA-IEVFQMM 438
              +VD+ A+ G +  A    + +P++ +V+ W TL+   T +  + LA  A I++ Q+ 
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL- 421

Query: 439 EECNEINPNQ-GTYVSILPAYS 459
                  PN  G YV +   Y+
Sbjct: 422 ------EPNHSGDYVLLSNMYA 437


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/572 (40%), Positives = 353/572 (61%), Gaps = 11/572 (1%)

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           IL  CA S     G   H  I+K G E+++ +   L++ YAK G ++ A RVF  M  RD
Sbjct: 16  ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRD 75

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VV+ N++I+A  +      A   F  M +     +  +  S+ +   +L D  ++R    
Sbjct: 76  VVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDINSAR---- 127

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL-PVKDVISWNTLITGYAQNGLA 428
            +M     ++DV+  NA++D Y K   + +A  +F  +   ++ ++WNT+I+ Y Q G  
Sbjct: 128 -LMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEF 186

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
             AI +FQ M+  N + P + T VS+L A +H+GAL  G  IH  +    L  DV +   
Sbjct: 187 GTAISMFQQMQSEN-VKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 245

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           L+DMY KCG ++ A+ +F+ + R +   WN+II   G++G+G++A+  F  M  EG++PD
Sbjct: 246 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 305

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
            +TFV +L+ CSHSGL+S GQRYF  M   +G++P ++HYGCMVDL GRAG+L  A   I
Sbjct: 306 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 365

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
           + MP++P++ + G+LL AC+IH + +LG   + +L E+D  + G YV +SN+YA++ +W+
Sbjct: 366 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 425

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V+  R L   RG+ KTPG SSIEVNN V  F  G+ +HP++ +I   L  +  ++K  G
Sbjct: 426 DVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQG 485

Query: 729 YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTK 788
           +VP+ + VL D+EE+EKE  +  HSER+A+AFG++S+PP   I++ KNLR C DCH+  K
Sbjct: 486 HVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMK 545

Query: 789 FISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            IS   +REIIVRD  RFHHF++G CSC DYW
Sbjct: 546 LISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 206/412 (50%), Gaps = 18/412 (4%)

Query: 138 LTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           L + + P   +F  +L++C    +   G+  HC ++K+GFE+D+ +   LL  Y + G  
Sbjct: 2   LRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDL 61

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             A+++F  MP RD  + NAMIS   + G   EA ++ D M       +  +  S++   
Sbjct: 62  KCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCY 117

Query: 255 ARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVS 312
            +  +I S  L+     VK  + +N      +I+ Y K   +  A  +F  M   R+ V+
Sbjct: 118 CKLGDINSARLMFDCNPVKDVVSWNA-----IIDGYCKSKQLVAAQELFLLMGSARNSVT 172

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++I+AY Q  +  TA   F  MQ   ++P  +T+VSL S  A L        +HG+I 
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYI- 231

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           R      DV++GNA++DMY K G + +A  VF GL  K++  WN++I G   NG   EAI
Sbjct: 232 RTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAI 291

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVD 491
             F +ME+   I P+  T+V IL   SH G L  G +  + ++    L   V    C+VD
Sbjct: 292 AAFIVMEK-EGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVD 350

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           + G+ G + +A+ L   +P + +S+   +++    IH          +Q+L+
Sbjct: 351 LLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLE 402



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 155/344 (45%), Gaps = 19/344 (5%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T L++FYA +GDL  ++  F  +  R+V   N+MIS   + G + EA + F   T  +  
Sbjct: 49  TGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSC 108

Query: 143 RPD----FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
             +     Y     + + R + D     C+ +K    W+  +       YC+      A+
Sbjct: 109 SWNSMITCYCKLGDINSARLMFD-----CNPVKDVVSWNAIIDG-----YCKSKQLVAAQ 158

Query: 199 KLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           +LF  M   R+S +WN MIS Y Q G    A+ +  +M+ E V    +T+ S+L  CA  
Sbjct: 159 ELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHL 218

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  IH YI    L+ ++ + N LI+MY K G +  A+ VF  +  +++  WNSII
Sbjct: 219 GALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSII 278

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
                +     A   F  M++ GI+PD +T V + S  +        +     ++     
Sbjct: 279 VGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGL 338

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              V     +VD+  + G +  A  +   +P+K     N+++ G
Sbjct: 339 EPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP----NSMVLG 378


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 269/848 (31%), Positives = 441/848 (52%), Gaps = 50/848 (5%)

Query: 15  KLLPLLQAHRPLFSAAA---NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLV 71
           K   LL +H PL +  A   N   +S D + +    +D    +     +  +K +HA + 
Sbjct: 61  KPYALLTSHPPLSNQPALLSNFPSVSNDTVNDHYYLLDLSVRYDD---VELIKAVHASIF 117

Query: 72  VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVD 131
              +   +  +  L+  Y  LG +  +   F  +S  NV ++ +MIS + +  R  +A++
Sbjct: 118 KLAE--DIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAME 175

Query: 132 CFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMY 188
            F++   +SG+  + ++F  +L  C  L+D   G ++H  V+K+GF    FV+ +L+ +Y
Sbjct: 176 IFFRMR-SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLY 234

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITV 247
            + G  +   +LFD+MP RD  SWN +IS   +      A ++  +MR ++G  +D  T+
Sbjct: 235 GKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTL 294

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           ++IL V AR    + G  IH +++K G E N+ V N LI  Y K G ++H + +F++M  
Sbjct: 295 STIL-VAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRV 353

Query: 308 RDVVSWNSIIAAYE-------------------------------QSNDPITAHGFFTTM 336
           RDV++W  +I AY                                Q+ +   A  FF  M
Sbjct: 354 RDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRM 413

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            + G++    TL  + +    L + + S+ +HGFI++ G F  +  I  A++DM  + G 
Sbjct: 414 VEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG-FGSNACIEAALLDMCTRCGR 472

Query: 397 INSA--CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           +  A              I W ++I GYA+N    EAI +F   +    +  ++    ++
Sbjct: 473 MADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAV 532

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L     +     G +IH   +K+    D+ V   ++ MY KC  +DDA+ +F  +P    
Sbjct: 533 LGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDI 592

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH--SGLVSEGQRYF 572
           V WN +I+ H +H QGD+AL+ + +M   G++PD +TFV +++A  H  S LV   +R F
Sbjct: 593 VSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLF 652

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             M+  + I P ++HY  +V + G  G L  A   I  MP+ P+AS+W ALL ACRIH N
Sbjct: 653 LSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSN 712

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
             +G  A+  L  +   +   Y+L+SN+Y+  G+W   D VR   R +G +K PG S I 
Sbjct: 713 TTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWII 772

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
             NKV  FY  +++HP+ + I+  L  L  +    GYVPD SFVL +VEE +K+  L  H
Sbjct: 773 HENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYH 832

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           S ++A  +G++ + P  PI+I KN+ +CGDCH + K++S +T REI +RD++  H F +G
Sbjct: 833 SAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNG 892

Query: 813 ICSCGDYW 820
            CSC DYW
Sbjct: 893 QCSCKDYW 900


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/794 (32%), Positives = 410/794 (51%), Gaps = 72/794 (9%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
            +HA LV  G    V  S  L+N Y     +  +   FD    +  + WN+++   +R  
Sbjct: 152 EVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSE 211

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
           +  +A++ F +    S    D  T   +L+AC   R L +GK+IH  V++ G   +  + 
Sbjct: 212 KWEDALELFRRMQSASAKATDG-TIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSIC 270

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            S++ MY R     +AR  FD     +S SWN++IS Y  +     A D+L EM   GV 
Sbjct: 271 NSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVK 330

Query: 242 MDPITVASILP---VCARSDNILS--------------------------------GLLI 266
            D IT  S+L    +    +N+L+                                G  I
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEI 390

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 326
           H YI++  LE++++V  +L++ Y K   +  A  VF     +++ +WNS+I+ Y      
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLF 450

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A      M++ GI+PDL+T  SL S  +      + RS                   A
Sbjct: 451 DNAEKLLNQMKEEGIKPDLVTWNSLVSGYSM-----SGRSEEAL---------------A 490

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           V++    LG+              +V+SW  +I+G  QN    +A++ F  M+E N + P
Sbjct: 491 VINRIKSLGL------------TPNVVSWTAMISGCCQNENYMDALQFFSQMQEEN-VKP 537

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N  T  ++L A +    L+ G +IH   +++    D+++AT L+DMYGK G++  A  +F
Sbjct: 538 NSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVF 597

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +   +   WN ++  + I+G G++    F +M   GVRPD ITF +LL+ C +SGLV 
Sbjct: 598 RNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVM 657

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G +YF  M+ ++ I P ++HY CMVDL G+AG L  A +FI  +P + DASIWGA+L A
Sbjct: 658 DGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAA 717

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR+H ++++  +A+  L  ++  N   Y LM NIY+   +W  V+ ++      G+K   
Sbjct: 718 CRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPN 777

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
            WS I+V   + +F T  ++HP+  +IY EL  L +++K LGYV D + V Q++++ EKE
Sbjct: 778 VWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKE 837

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
            +L SH+E+LA+ +G++ +   SPI++ KN R+C DCH   K+IS    REI +RD  RF
Sbjct: 838 KVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRF 897

Query: 807 HHFKDGICSCGDYW 820
           HHF +G CSC D W
Sbjct: 898 HHFMNGECSCKDRW 911


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/581 (40%), Positives = 348/581 (59%), Gaps = 9/581 (1%)

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK---FGMMRHALR 300
           P ++ S LP C     +     I  + +K  L+ +L +   LIN   +      M +A +
Sbjct: 26  PSSLLSCLPKCTSLKELKQ---IQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQ 82

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F+ + + D+V +NS+   Y +SN P+ A   F       + PD  T  SL         
Sbjct: 83  LFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKA 142

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            +  + +H   ++ G   E+  +   +++MYA    ++ A  VF+ +    V+S+N +IT
Sbjct: 143 FQQGKQLHCLAIKLG-LNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIIT 201

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GYA++   +EA+ +F+ ++   ++ PN  T +S+L + + +GAL  G  IH  V KN L 
Sbjct: 202 GYARSSRPNEALSLFRQLQ-ARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLD 260

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
             V V T L+DMY KCG +D A+S+F  +    +  W+A+I  + +HGQG   ++ F +M
Sbjct: 261 KYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEM 320

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
               V+PD ITF+ LL ACSH+GLV EG RYF+ M E +GI P +KHYGCMVDL GRAG 
Sbjct: 321 ARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGL 380

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A+ FI  +P++P   +W  LL +C  HGN+EL     +++ E+D  + G YV++SN+
Sbjct: 381 LHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNL 440

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            A  GKWE VD +R L   +G  K PG SSIEV+N V  F++G+  H     ++  L  L
Sbjct: 441 CARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDEL 500

Query: 721 TAKMKSLGYVPDKSFVLQ-DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
             ++KS+GYVPD S V+  D+E++EKE  L  HSE+LAI+FG++++PP + I++ KNLRV
Sbjct: 501 VKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRV 560

Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CGDCH+  K IS + +REII+RD  RFHHFKDG CSCGDYW
Sbjct: 561 CGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 29/448 (6%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN---LGDLSFSRHTFDHISYRNVYTW 113
           CT L  +K++ A  + +     +   TKL+N          + ++   F+ I   ++  +
Sbjct: 36  CTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLF 95

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
           NSM   Y R     +A+  F +  L   L PD YTFP +LKAC   +    GK++HC  +
Sbjct: 96  NSMFRGYSRSNAPLKAISLFIK-ALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAI 154

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           KLG   + +V  +L++MY      + A+++FD++      S+NA+I+GY +S    EAL 
Sbjct: 155 KLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALS 214

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +  +++   +  + +TV S+L  CA    +  G  IH Y+ K+GL+  + V+  LI+MYA
Sbjct: 215 LFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYA 274

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G +  A+ VF+ M  RD  +W+++I AY            F  M +A +QPD +T + 
Sbjct: 275 KCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLG 334

Query: 351 LTSIVAQLNDCRNSRSV-HGFIMRRGWFMEDV---IIG----NAVVDMYAKLGIINSACA 402
           L      L  C ++  V  GF  R  + M +V   I G      +VD+  + G+++ A  
Sbjct: 335 L------LYACSHTGLVDEGF--RYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYK 386

Query: 403 VFEGLPVKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA---- 457
             + LP+K   I W TL++  + +G    A +V   + E ++ +      +S L A    
Sbjct: 387 FIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGK 446

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFV 485
           +  V  LR+ + IH   +K   C  + V
Sbjct: 447 WEDVDTLRK-LMIHKGAVKIPGCSSIEV 473



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 211/421 (50%), Gaps = 18/421 (4%)

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRDS 209
           L  C +L + K+I    +K   + D+ +   L++   +       + A +LF+ +P  D 
Sbjct: 33  LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDI 92

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             +N+M  GY +S   ++A+ +  +     +  D  T  S+L  C  +     G  +H  
Sbjct: 93  VLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCL 152

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            +K GL  N +V   LINMYA    +  A RVFD+++E  VVS+N+II  Y +S+ P  A
Sbjct: 153 AIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEA 212

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  +Q   ++P+ +T++S+ S  A L      + +H ++ + G   + V +  A++D
Sbjct: 213 LSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNG-LDKYVKVNTALID 271

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYAK G ++ A +VFE + V+D  +W+ +I  YA +G   + + +F+ M    ++ P++ 
Sbjct: 272 MYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARA-KVQPDEI 330

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVDMYGKCGRIDDAMSL 505
           T++ +L A SH G + +G +    + +    + +        C+VD+ G+ G + +A   
Sbjct: 331 TFLGLLYACSHTGLVDEGFRYFYSMSE---VYGIIPGIKHYGCMVDLLGRAGLLHEAYKF 387

Query: 506 FYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQM--LDEGVRPDHITFVSLLTACSHS 562
             ++P + + + W  ++S    HG  + A     Q+  LD+    D++   +L   C+ +
Sbjct: 388 IDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNL---CARA 444

Query: 563 G 563
           G
Sbjct: 445 G 445



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 9/278 (3%)

Query: 50  FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C         K+LH L +  G  +  +    L+N YA   D+  ++  FD I 
Sbjct: 130 FPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEIL 189

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VD-GK 163
              V ++N++I+ Y R  R +EA+  F Q      L+P+  T   VL +C  L  +D GK
Sbjct: 190 EPCVVSYNAIITGYARSSRPNEALSLFRQLQ-ARKLKPNDVTVLSVLSSCALLGALDLGK 248

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH  V K G +  V V  +L+ MY + G  + A  +F+ M VRD+ +W+AMI  Y   G
Sbjct: 249 WIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHG 308

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVS 282
              + + + +EM    V  D IT   +L  C+ +  +  G      + + +G+   +   
Sbjct: 309 QGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHY 368

Query: 283 NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             ++++  + G++  A +  D++ ++   + W +++++
Sbjct: 369 GCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSS 406


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/669 (34%), Positives = 385/669 (57%), Gaps = 13/669 (1%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           +T L+ FY    D+      FD +  RN+ +WN+MIS Y   G   +A++ F Q  L   
Sbjct: 193 ATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM-LVDE 250

Query: 142 LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           ++ D  T    ++AC  L     GK+IH   +K  F  D+++  +LL+MY   G    + 
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR-S 257
           +LF+ +P RD+  WN+MIS Y   G   EA+D+   M+ EGV  D  TV  +L +C   +
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +L G  +H +++K G+  +  + N L++MY +   +    ++FD+M   D++SWN++I
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 430

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            A  ++     A   F  M+++ I+P+  T++S+ +    +      RS+HG++M+    
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 490

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
           +   +   A+ DMY   G   +A  +FEG P +D+ISWN +I  Y +N  A +A+ +F  
Sbjct: 491 INQPL-RTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHR 549

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN--CLCFDVFVATCLVDMYGK 495
           M   +E  PN  T +++L +++H+  L QG  +HA V +    L  D+ +A   + MY +
Sbjct: 550 M--ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 607

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG +  A ++F  +P+ + + WNA+I+ +G++G+G  A+  F QML++G RP+ +TFVS+
Sbjct: 608 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSV 667

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           L+ACSHSG +  G + FH M ++F + P L HY C+VDL  R G +  A  FI +MP+ P
Sbjct: 668 LSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEP 727

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
           DAS+W ALL +CR + + +      ++L +++  N G YVL+SN+YA  G W  V  +R+
Sbjct: 728 DASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRT 787

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
             +++GL+K PG S I V N+V  F  G+R+HP+ +KIY +L  L + M+  GY PD  +
Sbjct: 788 WLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRW 847

Query: 736 VLQDVEEDE 744
           V    EED+
Sbjct: 848 VFH--EEDD 854



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 183/602 (30%), Positives = 309/602 (51%), Gaps = 15/602 (2%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           + ++C   + V+R   +H  +  +  +  V   T +V+FY   G +  +R  FD +S R+
Sbjct: 59  VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRD 118

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           V  WN+M+  YV  G   EA+    +      LRP+  T   +L AC    +   G+ +H
Sbjct: 119 VVLWNAMVYGYVGWGCYEEAMLLVREMG-RENLRPNSRTMVALLLACEGASELRLGRGVH 177

Query: 167 CSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
              L+ G F+ +  VA +L+  Y RF +  V   LFD M VR+  SWNAMISGY   G+ 
Sbjct: 178 GYCLRNGMFDSNPHVATALIGFYLRFDM-RVLPLLFDLMVVRNIVSWNAMISGYYDVGDY 236

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            +AL++  +M ++ V  D +T+   +  CA   ++  G  IH   +K     +L++ N L
Sbjct: 237 FKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNAL 296

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +NMY+  G +  + ++F+ +  RD   WNS+I+AY        A   F  MQ  G++ D 
Sbjct: 297 LNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 356

Query: 346 LTLVSLTSIVAQL-NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            T+V + S+  +L +     +S+H  +++ G  + D  +GNA++ MY +L  + S   +F
Sbjct: 357 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRI-DASLGNALLSMYTELNCVESVQKIF 415

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + +   D+ISWNT+I   A+N L ++A E+F+ M E +EI PN  T +SIL A   V  L
Sbjct: 416 DRMKGVDIISWNTMILALARNTLRAQACELFERMRE-SEIKPNSYTIISILAACEDVTCL 474

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
             G  IH  V+K+ +  +  + T L DMY  CG    A  LF   P    + WNA+I+ +
Sbjct: 475 DFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASY 534

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKP 583
             + Q  KAL  F +M+ E   P+ +T +++L++ +H   + +GQ  + ++ +  F +  
Sbjct: 535 VKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGL 593

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            L      + ++ R G L  A N  + +P R   S W A++    ++G      +A  ++
Sbjct: 594 DLSLANAFITMYARCGSLQSAENIFKTLPKRNIIS-WNAMIAGYGMNGRGSDAMLAFSQM 652

Query: 644 FE 645
            E
Sbjct: 653 LE 654



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 276/552 (50%), Gaps = 19/552 (3%)

Query: 47  EIDFDDL-----FQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           E+ FD +      Q+C +L  +K   ++H L +    ++ ++    L+N Y+N G L  S
Sbjct: 250 EVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESS 309

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
              F+ +  R+   WNSMIS Y   G   EA+D F +   + G++ D  T   +L  C  
Sbjct: 310 HQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQ-SEGVKKDERTVVIMLSMCEE 368

Query: 159 ----LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNA 214
               L+ GK +H  V+K G   D  +  +LL MY         +K+FD M   D  SWN 
Sbjct: 369 LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNT 428

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           MI    ++    +A ++ + MR   +  +  T+ SIL  C     +  G  IH Y++KH 
Sbjct: 429 MILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHS 488

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
           +E N  +   L +MY   G    A  +F+   +RD++SWN++IA+Y ++N    A   F 
Sbjct: 489 IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFH 548

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAK 393
            M     +P+ +T++++ S    L      +S+H ++ RRG+ +  D+ + NA + MYA+
Sbjct: 549 RMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYAR 607

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G + SA  +F+ LP +++ISWN +I GY  NG  S+A+  F  M E +   PN  T+VS
Sbjct: 608 CGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLE-DGFRPNGVTFVS 666

Query: 454 ILPAYSHVGALRQGIKI-HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-R 511
           +L A SH G +  G+++ H+ V    +  ++   +C+VD+  + G ID+A      +P  
Sbjct: 667 VLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIE 726

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
             +  W A++S    +    +A   F + LD+    +   +V L    + +GL  E +R 
Sbjct: 727 PDASVWRALLSSCRAYSDAKQAKTIFEK-LDKLEPMNAGNYVLLSNVYATAGLWLEVRRI 785

Query: 572 FHMMQEEFGIKP 583
              ++E+   KP
Sbjct: 786 RTWLKEKGLRKP 797



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 261/528 (49%), Gaps = 13/528 (2%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLVD- 161
           I  ++   WNS+I       +  +A+   Y    + G+ P+  T P VLKAC  +N V+ 
Sbjct: 13  IQIKDPKHWNSVIKHQANL-KNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           GK IH S+       DV V  +++  YC+ G    AR +FD M  RD   WNAM+ GY  
Sbjct: 72  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL-EFNLF 280
            G   EA+ ++ EM  E +  +  T+ ++L  C  +  +  G  +H Y +++G+ + N  
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V+  LI  Y +F M    L +FD M+ R++VSWN++I+ Y    D   A   F  M    
Sbjct: 192 VATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++ D +T++      A+L   +  + +H   ++   F+ED+ I NA+++MY+  G + S+
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFE-FVEDLYILNALLNMYSNNGSLESS 309

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +FE +P +D   WN++I+ YA  G   EA+++F  M+    +  ++ T V +L     
Sbjct: 310 HQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQS-EGVKKDERTVVIMLSMCEE 368

Query: 461 VGA-LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
           + + L +G  +HA VIK+ +  D  +   L+ MY +   ++    +F ++     + WN 
Sbjct: 369 LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNT 428

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEE 578
           +I     +    +A   F +M +  ++P+  T +S+L AC     +  G+  + ++M+  
Sbjct: 429 MILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHS 488

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
             I   L+    + D++   G    A +  +  P R D   W A++ +
Sbjct: 489 IEINQPLR--TALADMYMNCGDEATARDLFEGCPDR-DLISWNAMIAS 533


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 359/646 (55%), Gaps = 40/646 (6%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D+F   +LL  Y + G     +  FD MP RDS S+N  I+G+  +    E+L++   M+
Sbjct: 88  DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            EG      T+ SIL   A+  ++  G  IH  I+      N+F+ N L +MYAK G + 
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  +FD + ++++VSWN +I+ Y ++  P    G    M+ +G  PD +T+        
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM-------- 259

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                                       + ++  Y + G ++ A  VF     KD++ W 
Sbjct: 260 ----------------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWT 291

Query: 417 TLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
            ++ GYA+NG   +A+ +F +M+ E   I P+  T  S++ + + + +L  G  +H + I
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLE--HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
              L  ++ V++ L+DMY KCG IDDA S+F  +P  + V WNA+I     +G    AL 
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F  ML +  +PD++TF+ +L+AC H   + +GQ YF  +  + G+ P L HY CMV+L 
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           GR G +  A   I+NM   PD  IW  LL  C   G++    VA+  LFE+D      Y+
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
           ++SN+YA++G+W+ V  VR+L + + +KK  G+S IE++N+V  F + +RTHP+ E IY+
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYE 589

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK-SPIQIF 774
           +L  L  K++  G+ P+ + VL DV EDEK   +  HSE+LA+AFG+I  P   SPI+I 
Sbjct: 590 KLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRII 649

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KN+R+C DCH + KF S+I  R+II+RDSNRFHHF  G CSC D W
Sbjct: 650 KNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 238/493 (48%), Gaps = 56/493 (11%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKT------------VFSSTKLVNFYANLGDLSFSRH 100
           LFQ      H + LH L    GK++             +FS   L++ YA  G +   + 
Sbjct: 52  LFQPTDSFLHNQLLH-LYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKA 110

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
           TFD + +R+  ++N+ I+ +       E+++ F +     G  P  YT   +L A   L 
Sbjct: 111 TFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ-REGFEPTEYTIVSILNASAQLS 169

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           D   GK+IH S++   F  +VF+  +L  MY + G    AR LFD +  ++  SWN MIS
Sbjct: 170 DLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY ++G   + + +L +MRL G   D +T+++I+                          
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------ 265

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
                      Y + G +  A RVF +  E+D+V W +++  Y ++     A   F  M 
Sbjct: 266 -----------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
              I+PD  TL S+ S  A+L    + ++VHG  +  G    ++++ +A++DMY+K G I
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG-LNNNLLVSSALIDMYSKCGFI 373

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           + A +VF  +P ++V+SWN +I G AQNG   +A+E+F+ M +  +  P+  T++ IL A
Sbjct: 374 DDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ-QKFKPDNVTFIGILSA 432

Query: 458 YSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-V 515
             H   + QG +    +  ++ +   +    C+V++ G+ GRI+ A++L   +      +
Sbjct: 433 CLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFL 492

Query: 516 PWNAIISCHGIHG 528
            W+ ++S     G
Sbjct: 493 IWSTLLSICSTKG 505


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/549 (40%), Positives = 331/549 (60%), Gaps = 16/549 (2%)

Query: 283 NNLINMYAKFGMMRH---ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           N LI+  ++    RH   A  +FD+M +RD  +W+++++ Y +   P  A   +  MQ+ 
Sbjct: 98  NTLISALSR--SPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQE- 154

Query: 340 GIQP------DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME--DVIIGNAVVDMY 391
             +P      +  T  S  +  A     R  R +H  ++RRG      D ++ +A+ DMY
Sbjct: 155 --EPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMY 212

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
           AK G ++ A  VF+ +PV+D +SW  ++  Y   G   E   +F  M     + PN+ TY
Sbjct: 213 AKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTY 272

Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
             +L A +       G ++H R+ K+      F  + L+ MY KCG +  A+ +F  + +
Sbjct: 273 AGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAK 332

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V W A+IS +  +GQ ++AL +F   L  G++PDH+TFV +L+AC+H+GLV +G   
Sbjct: 333 PDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEI 392

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           FH ++E++ I+    HY C++DL  R+G    A   I NM V+P+  +W +LLG CRIH 
Sbjct: 393 FHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHK 452

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           N+ L   A++ LFE++ EN   YV ++NIYA+VG ++ V++VR +   +G+ K P  S I
Sbjct: 453 NVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWI 512

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           EV  +V +F  G+++HPK ++IY  L+ L  KM   GYV D  FVL DVE+++KE  +  
Sbjct: 513 EVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGY 572

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSERLA+AFGII++P  SPI++FKNLR+CGDCH   K ISQI +R+IIVRDSNRFHHFKD
Sbjct: 573 HSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKD 632

Query: 812 GICSCGDYW 820
           GICSC DYW
Sbjct: 633 GICSCRDYW 641



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 175/382 (45%), Gaps = 20/382 (5%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L  +R  FD +  R+ + W++++S Y R G+   A+  + +     G       F     
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170

Query: 155 AC-----RNLVDGKKIHCSVLKLGFE---WDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
                  R    G+++HC V++ G +    D  + ++L  MY + G  + AR++FD MPV
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230

Query: 207 RDSGSWNAMISGYCQSGNAVEALDI-LDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
           RD+ SW AM+  Y   G   E   + L  +R  GV  +  T A +L  CA+      G  
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQ 290

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H  + K G   + F  + L+ MY+K G M  A+RVF+ M + D+VSW ++I+ Y Q+  
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
           P  A  +F    ++GI+PD +T V + S  A          +   I  +           
Sbjct: 351 PEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYA 410

Query: 386 AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEEC 441
            V+D+ ++ G    A  +   + VK +   W +L+ G   +   GLA  A E        
Sbjct: 411 CVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEAL------ 464

Query: 442 NEINP-NQGTYVSILPAYSHVG 462
            EI P N  TYV++   Y+ VG
Sbjct: 465 FEIEPENPATYVTLANIYASVG 486



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 5/242 (2%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           + L + YA  G +  +R  FD +  R+  +W +M+  Y   GR  E    F     T G+
Sbjct: 206 SALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGV 265

Query: 143 RPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           RP+ +T+  VL+AC        G+++H  + K G     F  ++LL MY + G    A +
Sbjct: 266 RPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVR 325

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +F+ M   D  SW A+ISGY Q+G   EAL   D     G+  D +T   +L  CA +  
Sbjct: 326 VFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGL 385

Query: 260 ILSGLLI-HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSII 317
           +  GL I H    ++ +E        +I++ ++ G    A ++   M ++ +   W S++
Sbjct: 386 VDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLL 445

Query: 318 AA 319
             
Sbjct: 446 GG 447



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 13/200 (6%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H  +  SG   + F+ + L+  Y+  GD+  +   F+ ++  ++ +W ++IS Y + 
Sbjct: 289 RQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQN 348

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVL-KLGFEWDVF 179
           G+  EA+  F  F L SG++PD  TF  VL AC +  LVD G +I  S+  +   E    
Sbjct: 349 GQPEEALRYFDMF-LRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTAD 407

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ----SGNAVEALDILDEM 235
             A ++ +  R G    A K+  +M V+ +    A + G C+     G A  A + L E+
Sbjct: 408 HYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEI 467

Query: 236 RLEGVSMDPITVASILPVCA 255
             E    +P T  ++  + A
Sbjct: 468 EPE----NPATYVTLANIYA 483


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/561 (39%), Positives = 347/561 (61%), Gaps = 10/561 (1%)

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G  +H +++  GL+    V + ++  YA  G +  ++ VF+ +   D  ++  ++ +  +
Sbjct: 89  GHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI--GDYFTFPFVLKSSVE 146

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
                        + + G+Q DL    SL  +  +  +  ++  V   +  R     DV 
Sbjct: 147 LLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-----DVS 201

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEEC 441
             NA++  Y K G I++A A+FE +P ++++SW T+I+GY+Q+GLA +A+ +F +M++E 
Sbjct: 202 SWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKED 261

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           + + PN  T +S+LPA + +  L +G +IH    +  L  +  V   L  MY KCG + D
Sbjct: 262 SGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVD 321

Query: 502 AMSLFYQVPRSSS--VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           A + F ++ R+    + WN +I+ +  +G G +A++ FR+M+  G++PD ITF  LL+ C
Sbjct: 322 ARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGC 381

Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
           SHSGLV  G +YF+ M   + I P ++HY C+ DL GRAG L  A   +  MP+    SI
Sbjct: 382 SHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSI 441

Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
           WG+LL ACR H N+E+   A+ +LF ++ EN G YVL+SN+YA  G+W+ VD++R++ + 
Sbjct: 442 WGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKS 501

Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
           +G KK+PG S IE+N K  +F  G+ +HP+ ++IY  L  L  KMK+ GY PD S+VL D
Sbjct: 502 QGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHD 561

Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
           + E+EKE  L +HSE+LA+AFGI+++P ++ +++ KNLR+CGDCH    FIS+I  RE+I
Sbjct: 562 ISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVI 621

Query: 800 VRDSNRFHHFKDGICSCGDYW 820
           VRD NRFHHFK G CSCGDYW
Sbjct: 622 VRDINRFHHFKGGCCSCGDYW 642



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 169/370 (45%), Gaps = 79/370 (21%)

Query: 25  PLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFS 81
           PL  +A     + P         + +  +FQ  T L+ +K   ++HA +++ G   T   
Sbjct: 48  PLTISATLQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALV 107

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
            +K+V FYA+ GD+  S   F+ I                                    
Sbjct: 108 GSKMVAFYASSGDIDSSVSVFNGIG----------------------------------- 132

Query: 142 LRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
              D++TFP VLK+   L+    GK +H  +L++G ++D++VA SL+ +Y + G  N A 
Sbjct: 133 ---DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAG 189

Query: 199 KLFDDMPVRDSGSWNA-------------------------------MISGYCQSGNAVE 227
           K+FD+M +RD  SWNA                               MISGY QSG A +
Sbjct: 190 KVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQ 249

Query: 228 ALDILDEMRLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           AL + DEM  E  GV  + +T+ S+LP CA+   +  G  IH    + GL  N  V   L
Sbjct: 250 ALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIAL 309

Query: 286 INMYAKFGMMRHALRVFDQM--MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
             MYAK G +  A   FD++   E+++++WN++I AY      + A   F  M QAGIQP
Sbjct: 310 TAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQP 369

Query: 344 DLLTLVSLTS 353
           D +T   L S
Sbjct: 370 DDITFTGLLS 379



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 45/364 (12%)

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           M++ Y  SG+   ++ + + +       D  T   +L       ++  G  +H  I++ G
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIG------DYFTFPFVLKSSVELLSVWMGKCVHGLILRIG 164

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF- 333
           L+F+L+V+ +LI +Y K G +  A +VFD M  RDV SWN+++A Y +S     A   F 
Sbjct: 165 LQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFE 224

Query: 334 ----------TTM----------QQA------------GIQPDLLTLVSLTSIVAQLNDC 361
                     TTM          QQA            G++P+ +T++S+    AQL+  
Sbjct: 225 RMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTL 284

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL--PVKDVISWNTLI 419
              R +H    R G    +  +  A+  MYAK G +  A   F+ L    K++I+WNT+I
Sbjct: 285 ERGRQIHELACRMG-LNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMI 343

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-C 478
           T YA  G   +A+  F+ M +   I P+  T+  +L   SH G +  G+K    +     
Sbjct: 344 TAYASYGHGLQAVSTFREMIQAG-IQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYS 402

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFF 537
           +   V    C+ D+ G+ GR+ +A  L  ++P  +    W ++++    H   + A    
Sbjct: 403 INPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAA 462

Query: 538 RQML 541
           R++ 
Sbjct: 463 RKLF 466


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/663 (37%), Positives = 367/663 (55%), Gaps = 40/663 (6%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVRDSGSWNAMISG 218
           + IH  ++K G     +  + L+  +C     F     A  +F+ +   +   WN M  G
Sbjct: 7   RMIHAQMIKTGLHNTNYALSKLIE-FCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 65

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           +  S + V AL +   M   G+  +  T   +L  CA+S     G  IH +++K G + +
Sbjct: 66  HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS-------------------------- 312
           L+V  +LI+MY + G +  A +VFD+   RDVVS                          
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185

Query: 313 -----WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
                WN++I+ Y ++ +   A   F  M +  ++PD  T+V++ S  AQ       R V
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           H +I   G F  ++ I NA++D+Y+K G + +AC +FEGLP KDVISWNTLI GY    L
Sbjct: 246 HSWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNL 304

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFV 485
             EA+ +FQ M    E  PN  T +SILPA +H+GA+  G  IH  + K    +     +
Sbjct: 305 YKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSL 363

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            T L+DMY KCG I+ A  +F  +   S   WNA+I    +HG+ D + + F +M   G+
Sbjct: 364 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGI 423

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            PD ITFV LL+ACSHSG++  G+  F  M +++ + P L+HYGCM+DL G +G    A 
Sbjct: 424 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 483

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
             I  M + PD  IW +LL AC++HGN+ELG   +  L +++ EN G YVL+SNIYA  G
Sbjct: 484 EMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAG 543

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           +W  V   R+L  D+G+KK PG SSIE+++ V  F  G++ HP+  +IY  L  +   ++
Sbjct: 544 RWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 603

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             G+VPD S VLQ++EE+ KE  L  HSE+LAIAFG+IS+ P + + I KNLRVC +CH 
Sbjct: 604 EAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 663

Query: 786 WTK 788
             K
Sbjct: 664 AYK 666



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 268/538 (49%), Gaps = 44/538 (8%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRNVYTWNSM 116
           L  ++ +HA ++ +G   T ++ +KL+ F     +   L ++   F+ I   N+  WN+M
Sbjct: 3   LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62

Query: 117 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 173
              +        A+   Y   ++ GL P+ YTFP +LK+C   +   +G++IH  VLKLG
Sbjct: 63  FRGHALSSDPVSALK-LYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDD------------------------------ 203
            + D++V  SL+ MY + G    A K+FD+                              
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181

Query: 204 -MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            +PV+D  SWNAMISGY ++GN  EAL++  +M    V  D  T+ +++  CA+S +I  
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241

Query: 263 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
           G  +H +I  HG   NL + N LI++Y+K G +  A  +F+ +  +DV+SWN++I  Y  
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV- 381
            N    A   F  M ++G  P+ +T++S+    A L      R +H +I +R   + +  
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            +  +++DMYAK G I +A  VF  +  K + SWN +I G+A +G A  + ++F  M + 
Sbjct: 362 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK- 420

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRID 500
           N I P+  T+V +L A SH G L  G  I   + ++  +   +    C++D+ G  G   
Sbjct: 421 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480

Query: 501 DAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           +A  +   +      V W +++    +HG  +   +F + ++   + P++     LL+
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIK--IEPENPGSYVLLS 536



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 188/392 (47%), Gaps = 9/392 (2%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T L+  YA+ G +  ++  FD I  ++V +WN+MIS Y   G   EA++ F   
Sbjct: 155 RDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 214

Query: 137 TLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            + + +RPD  T   V+ AC    ++  G+++H  +   GF  ++ +  +L+ +Y + G 
Sbjct: 215 -MKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGE 273

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A  LF+ +P +D  SWN +I GY       EAL +  EM   G + + +T+ SILP 
Sbjct: 274 LETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 333

Query: 254 CARSDNILSGLLIHLYIVKH--GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
           CA    I  G  IH+YI K   G+     +  +LI+MYAK G +  A +VF+ ++ + + 
Sbjct: 334 CAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 393

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SWN++I  +        +   F+ M++ GI+PD +T V L S  +        R +   +
Sbjct: 394 SWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 453

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            +       +     ++D+    G+   A  +   + ++ D + W +L+     +G    
Sbjct: 454 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 513

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
                Q + +    NP  G+YV +   Y+  G
Sbjct: 514 GESFAQNLIKIEPENP--GSYVLLSNIYATAG 543


>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/609 (38%), Positives = 345/609 (56%), Gaps = 46/609 (7%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
            AS+L  C+ +        +H  +V+ GL+ +  V+  L   YA  G + H+L +  +  
Sbjct: 27  AASLLAACSTARRASE---LHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTK 83

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN--- 363
           +   + + S I A+      +      + M   G+ P   TL       A L  CR    
Sbjct: 84  DPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLS------ASLPACRGLSL 137

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMY-------------------------------A 392
            R++H +  +      D  +  A++ MY                               A
Sbjct: 138 GRALHAYAFKLA-LSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYA 196

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
            +G ++ A  +F+GLP KD I WN +I GY Q+G  +EA+++F+ M   +   P++ T V
Sbjct: 197 NMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLR-SSAEPDEVTVV 255

Query: 453 SILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
            +L A + +G +  G  +H+ V  + C+  +V VAT LVDMY KCG ++DA+++F+ +  
Sbjct: 256 LVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGN 315

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
              V WNA+I+ + +HG   KAL  F Q+ D+G+ P  ITF+ LL ACSHSGLV EG+ +
Sbjct: 316 KDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSF 375

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           F  M+ E+GI P ++HYGCMVDL GRAG +  A + +Q++ + PDA +W +LL ACR+H 
Sbjct: 376 FQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHK 435

Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
           NM LG   +D L      N G Y+L+SNIYA VGKWE V  VRS+ +  G++K PG S+I
Sbjct: 436 NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAI 495

Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS 751
           E++ KV  F  G+ +HP  ++IY  L  + A +K  G+VP    VL D++E  KE  L  
Sbjct: 496 EIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAV 555

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 811
           HSE+LA+AFG+ISS P S I+I KNLR C DCH   K IS+IT R+I+ RD NRFHHF D
Sbjct: 556 HSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVD 615

Query: 812 GICSCGDYW 820
           G C+CGDYW
Sbjct: 616 GSCTCGDYW 624



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 195/452 (43%), Gaps = 72/452 (15%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           +L AC       ++H +V++ G + D  VA  L   Y   G  + +  L        +  
Sbjct: 30  LLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIF 89

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           + + I  +   G  +  L +L +M  EG+     T+++ LP C     +  G  +H Y  
Sbjct: 90  YTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC---RGLSLGRALHAYAF 146

Query: 272 KHGLEFNLFVSNNLINM-------------------------------YAKFGMMRHALR 300
           K  L  + +V+  L++M                               YA  G +  A R
Sbjct: 147 KLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARR 206

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +FD +  +D + WN++I  Y Q   P  A   F  M ++  +PD +T+V + S VAQL  
Sbjct: 207 LFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGT 266

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
             + + +H ++        +V +  A+VDMY K G +  A AVF G+  KD++ WN +I 
Sbjct: 267 VESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMIN 326

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           GYA +G + +A+E+F  + +   + P   T++ +L A SH G + +G +   + +++   
Sbjct: 327 GYAMHGDSRKALEMFVQLRD-QGLWPTDITFIGLLNACSHSGLVEEG-RSFFQSMEHEYG 384

Query: 481 FDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
            D  +    C+VD+ G+ G I++A  L   +                             
Sbjct: 385 IDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLT---------------------------- 416

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
                 + PD + +VSLL AC     ++ GQR
Sbjct: 417 ------ITPDAVMWVSLLAACRLHKNMALGQR 442



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 173/445 (38%), Gaps = 40/445 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L  +C+       LHA +V  G       + +L   YA  G L  S              
Sbjct: 30  LLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIF 89

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL 172
           + S I  +   G     +       L+ GL P  +T    L ACR L  G+ +H    KL
Sbjct: 90  YTSAIHAHSSRGLHLPGLALLSDM-LSEGLLPTAHTLSASLPACRGLSLGRALHAYAFKL 148

Query: 173 GFEWDVFVAASLLHMY-------------------------------CRFGLANVARKLF 201
               D +VA +LL MY                                  G  + AR+LF
Sbjct: 149 ALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLF 208

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
           D +P +D   WNAMI GY Q G   EAL +   M       D +TV  +L   A+   + 
Sbjct: 209 DGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVE 268

Query: 262 SGLLIHLYIV-KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
           SG  +H Y+     ++ N+ V+  L++MY K G +  A+ VF  +  +D+V WN++I  Y
Sbjct: 269 SGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGY 328

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
               D   A   F  ++  G+ P  +T + L +  +        RS    +         
Sbjct: 329 AMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPK 388

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG--YAQNGLASEAIEVFQM 437
           +     +VD+  + G+I  A  + + L +  D + W +L+      +N    + I  F +
Sbjct: 389 IEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLV 448

Query: 438 MEECNEINPNQGTYVSILPAYSHVG 462
                    N G Y+ +   Y+ VG
Sbjct: 449 ANGL----ANSGMYILLSNIYAAVG 469



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 39/319 (12%)

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           LT     S++A  +  R +  +H  ++R+G    D  +   +   YA  G ++ +  +  
Sbjct: 22  LTADRAASLLAACSTARRASELHAAVVRKG-LDSDRAVAFRLQRAYAASGRLDHSLTLLG 80

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGAL 464
                  I + + I  ++  GL    + +   M+ E   + P   T  + LPA      L
Sbjct: 81  RTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSE--GLLPTAHTLSASLPACR---GL 135

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDM-------------------------------Y 493
             G  +HA   K  L  D +VAT L+ M                               Y
Sbjct: 136 SLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCY 195

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
              G +DDA  LF  +PR   + WNA+I  +  HG+ ++AL  FR+ML     PD +T V
Sbjct: 196 ANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVV 255

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L+A +  G V  G+     ++    ++ +++    +VD++ + G L  A      +  
Sbjct: 256 LVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGN 315

Query: 614 RPDASIWGALLGACRIHGN 632
           + D  +W A++    +HG+
Sbjct: 316 K-DIVVWNAMINGYAMHGD 333


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 239/677 (35%), Positives = 365/677 (53%), Gaps = 71/677 (10%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN------------ 224
           D F+   LLH+Y +FG    A+ LFD M  RD  SWNA++S Y +SG+            
Sbjct: 57  DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 225 -------------------AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
                                E+L++   M+ EG      T+ SIL   A+  ++  G  
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           IH  I+      N+F+ N L +MYAK G +  A  +FD + ++++VSWN +I+ Y ++  
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
           P    G    M+ +G  PD +T+                                    +
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTM------------------------------------S 260

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEI 444
            ++  Y + G ++ A  VF     KD++ W  ++ GYA+NG   +A+ +F +M+ E   I
Sbjct: 261 TIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE--HI 318

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            P+  T  S++ + + + +L  G  +H + I   L  ++ V++ L+DMY KCG IDDA S
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARS 378

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F  +P  + V WNA+I     +G    AL  F  ML +  +PD++TF+ +L+AC H   
Sbjct: 379 VFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNW 438

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           + +GQ YF  +  + G+ P L HY CMV+L GR G +  A   I+NM   PD  IW  LL
Sbjct: 439 IEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLL 498

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
             C   G++    VA+  LFE+D      Y+++SN+YA++G+W+ V  VR+L + + +KK
Sbjct: 499 SICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKK 558

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
             G+S IE++N+V  F + +RTHP+ E IY++L  L  K++  G+ P+ + VL DV EDE
Sbjct: 559 FAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDE 618

Query: 745 KEHILTSHSERLAIAFGIISSPPK-SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           K   +  HSE+LA+AFG+I  P   SPI+I KN+R+C DCH + KF S+I  R+II+RDS
Sbjct: 619 KFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDS 678

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHF  G CSC D W
Sbjct: 679 NRFHHFSTGKCSCNDNW 695



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 238/493 (48%), Gaps = 56/493 (11%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTV------------FSSTKLVNFYANLGDLSFSRH 100
           LFQ      H + LH L    GK++              FS   L++ YA  G +   + 
Sbjct: 52  LFQPTDSFLHNQLLH-LYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKA 110

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
           TFD + +R+  ++N+ I+ +       E+++ F +     G  P  YT   +L A   L+
Sbjct: 111 TFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ-REGFEPTEYTIVSILNASAQLL 169

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           D   GK+IH S++   F  +VF+  +L  MY + G    AR LFD +  ++  SWN MIS
Sbjct: 170 DLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMIS 229

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY ++G   + + +L +MRL G   D +T+++I+                          
Sbjct: 230 GYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------------------------ 265

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
                      Y + G +  A RVF +  E+D+V W +++  Y ++     A   F  M 
Sbjct: 266 -----------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
              I+PD  TL S+ S  A+L    + ++VHG  +  G    ++++ +A++DMY+K G I
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG-LNNNLLVSSALIDMYSKCGFI 373

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           + A +VF  +P ++V+SWN +I G AQNG   +A+E+F+ M +  +  P+  T++ IL A
Sbjct: 374 DDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQ-QKFKPDNVTFIGILSA 432

Query: 458 YSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-V 515
             H   + QG +    +  ++ +   +    C+V++ G+ GRI+ A++L   +      +
Sbjct: 433 CLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFL 492

Query: 516 PWNAIISCHGIHG 528
            W+ ++S     G
Sbjct: 493 IWSTLLSICSTKG 505


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/683 (34%), Positives = 382/683 (55%), Gaps = 6/683 (0%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H L +  G    V + + LV+ Y+    L  +   F  +  RN+  W+++I+ YV+  
Sbjct: 159 QVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQND 218

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
           R  E +  F    L  G+     T+  V ++C  L     G ++H   LK  F +D  + 
Sbjct: 219 RFIEGLKLFKDM-LKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG 277

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            + L MY +      A K+F+ +P     S+NA+I GY +    ++ALDI   ++   + 
Sbjct: 278 TATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLG 337

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            D I+++  L  C+     L G+ +H   VK GL FN+ V+N +++MY K G +  A  +
Sbjct: 338 FDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLI 397

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F++M  RD VSWN+IIAA+EQ+ + +     F +M ++ ++PD  T  S+    A     
Sbjct: 398 FEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQAL 457

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
                +HG I++ G  + D  +G+A+VDMY K G++  A  +   L  K  +SWN++I+G
Sbjct: 458 NYGTEIHGRIIKSGMGL-DWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISG 516

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           ++    +  A   F  M E   I P+  TY ++L   +++  +  G +IHA+++K  L  
Sbjct: 517 FSSQKQSENAQRYFSQMLEMG-IIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHS 575

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DV++A+ LVDMY KCG + D+  +F + P+   V W+A+I  +  HG G+KA+N F +M 
Sbjct: 576 DVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQ 635

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
              V+P+H  F+S+L AC+H G V +G  YF  M   +G+ P ++HY CMVDL GR+G +
Sbjct: 636 LLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQV 695

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A   I++MP   D  IW  LL  C++ GN+E+   A + L ++D ++   YVL++N+Y
Sbjct: 696 NEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVY 755

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           A VG W  V ++RS+ ++  LKK PG S IEV ++V  F  G++ HP+ E+IY++   L 
Sbjct: 756 AIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLV 815

Query: 722 AKMKSLGYVPDKSFVLQDVEEDE 744
            +MK  GYVPD  F+L +  E++
Sbjct: 816 DEMKWAGYVPDIDFMLDEEMEEQ 838



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 172/646 (26%), Positives = 324/646 (50%), Gaps = 45/646 (6%)

Query: 43  NESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFY---------- 89
           N ++++ F  + Q C+ L  +   K++H  ++V+G + T++ +  L+ FY          
Sbjct: 2   NPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAF 61

Query: 90  ---------------------ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
                                A +G++ F++  FD +  R+V +WNS++S Y+  G   +
Sbjct: 62  KVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRK 121

Query: 129 AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLL 185
           +++ F +   +  +  D+ TF  +LKAC  + D   G ++HC  +++GFE DV   ++L+
Sbjct: 122 SIEIFVRMR-SLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
            MY +    + A ++F +MP R+   W+A+I+GY Q+   +E L +  +M   G+ +   
Sbjct: 181 DMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T AS+   CA       G  +H + +K    ++  +    ++MYAK   M  A +VF+ +
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL 300

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
                 S+N+II  Y + +  + A   F ++Q+  +  D ++L    +  + +       
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI 360

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            +HG  ++ G    ++ + N ++DMY K G +  AC +FE +  +D +SWN +I  + QN
Sbjct: 361 QLHGLAVKCGLGF-NICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQN 419

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
               + + +F  M   + + P+  TY S++ A +   AL  G +IH R+IK+ +  D FV
Sbjct: 420 EEIVKTLSLFVSMLR-STMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
            + LVDMYGKCG + +A  +  ++   ++V WN+IIS      Q + A  +F QML+ G+
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGI 538

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            PD+ T+ ++L  C++   +  G++  H    +  +   +     +VD++ + G++  + 
Sbjct: 539 IPDNYTYATVLDVCANMATIELGKQ-IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSR 597

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
              +  P R D   W A++ A   HG   LG  A +   E+   NV
Sbjct: 598 LMFEKAPKR-DYVTWSAMICAYAYHG---LGEKAINLFEEMQLLNV 639



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 11/334 (3%)

Query: 44  ESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E  +  +  + ++C     L++   +H  ++ SG     F  + LV+ Y   G L  +  
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV 160
               +  +   +WNS+IS +    + SE    ++   L  G+ PD YT+  VL  C N+ 
Sbjct: 498 IHARLEEKTTVSWNSIISGF-SSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMA 556

Query: 161 D---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               GK+IH  +LKL    DV++A++L+ MY + G    +R +F+  P RD  +W+AMI 
Sbjct: 557 TIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMIC 616

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLE 276
            Y   G   +A+++ +EM+L  V  +     S+L  CA    +  GL     ++ H GL+
Sbjct: 617 AYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLD 676

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
             +   + ++++  + G +  AL++ + M  E D V W ++++  +   +   A   F +
Sbjct: 677 PQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNS 736

Query: 336 MQQAGIQPD--LLTLVSLTSIVAQLNDCRNSRSV 367
           + Q   Q     + L ++ +IV    +    RS+
Sbjct: 737 LLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSI 770


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/586 (38%), Positives = 352/586 (60%), Gaps = 7/586 (1%)

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           +D ++  G+  D  T + ++  C     +  G LI  ++  +G +  +F+ N LINMY K
Sbjct: 1   MDSLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVK 60

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           F ++  A ++FDQM +R+V+SW ++I+AY +      A      M + G++P++ T    
Sbjct: 61  FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTY--- 117

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
           +S++   N   + R +H  I++ G    DV + +A++D++AKLG    A +VF+ +   D
Sbjct: 118 SSVLRACNGMSDVRMLHCGIIKEG-LESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGD 176

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            I WN++I G+AQN  +  A+E+F+ M+    I   Q T  S+L A + +  L  G++ H
Sbjct: 177 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLELGMQAH 235

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
             ++K     D+ +   LVDMY KCG ++DA  +F Q+     + W+ +IS    +G   
Sbjct: 236 VHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQ 293

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL  F  M   G +P++IT V +L ACSH+GL+ +G  YF  M++ +GI P  +HYGCM
Sbjct: 294 EALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCM 353

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           +DL G+AG L  A   +  M   PDA  W  LLGACR+  NM L   A+ ++  +D E+ 
Sbjct: 354 IDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDA 413

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G Y ++SNIYAN  KW+ V+E+R   RD G+KK PG S IEVN ++  F  G+ +HP+  
Sbjct: 414 GTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIV 473

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           ++  +L  L  ++  +GYVP+ +FVLQD+E ++ E  L  HSE+LA+AFG+++ P +  I
Sbjct: 474 EVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVI 533

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +I KNLR+CGDCH + K  S++  R I++RD  R+HHF+DG CSCG
Sbjct: 534 RIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 189/362 (52%), Gaps = 26/362 (7%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           L  +G    +F    L+N Y     L+ +   FD +  RNV +W +MIS Y +C    +A
Sbjct: 39  LYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 98

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
           ++      L  G+RP+ YT+  VL+AC  + D + +HC ++K G E DV+V ++L+ ++ 
Sbjct: 99  LELLV-LMLRDGVRPNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFA 157

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G    A  +FD+M   D+  WN++I G+ Q+  +  AL++   M+  G   +  T+ S
Sbjct: 158 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 217

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           +L  C     +  G+  H++IVK+  + +L ++N L++MY K G +  A RVF+QM ERD
Sbjct: 218 VLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDARRVFNQMKERD 275

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           V++W+++I+   Q+     A   F  M+ +G +P+ +T      IV  L  C      H 
Sbjct: 276 VITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYIT------IVGVLFACS-----HA 324

Query: 370 FIMRRGWF----MEDVIIGN-------AVVDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
            ++  GW+    M+ +   N        ++D+  K G ++ A  +   +  + D ++W T
Sbjct: 325 GLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 384

Query: 418 LI 419
           L+
Sbjct: 385 LL 386


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/690 (36%), Positives = 389/690 (56%), Gaps = 13/690 (1%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRNVYTWNSMI 117
           L++V   H     SG I  ++ +  ++  Y+    GDL+ +   FD + +++  TWN+MI
Sbjct: 15  LYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMI 74

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK----ACRNLVDGKKIHCSVLKLG 173
           + YV  G L  A + F +     G + D YTF  +LK    ACR+ + G+++H  ++K+G
Sbjct: 75  TGYVESGNLGAAWE-FLKSMKRRGFQADGYTFGSILKGVAHACRHDL-GQQVHSLIVKIG 132

Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
           +E  V+  ++LL MY +      A  +F  MPVR+  SWNA+I G+ Q G+   A  +LD
Sbjct: 133 YEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLD 192

Query: 234 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
            M+ EGV ++  T A +L +          + +H  I+KHGLEF   + N  +  Y++ G
Sbjct: 193 CMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECG 252

Query: 294 MMRHALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           ++  A RVFD  +  RD+V+WNS++ AY   +    A   F  MQ  G +PD+ T   + 
Sbjct: 253 LLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVI 312

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG--IINSACAVFEGLPVK 410
           S           +S H  +++RG   E V I NA++ MY KL    + +A  +F  +  K
Sbjct: 313 SACFAAAHKNYGKSFHALVIKRG-LEESVTICNALITMYLKLNNKSMEAALNLFHSMKSK 371

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D +SWN+++TG++Q G + +A+++F  M    E   +   Y ++L + S +  L+ G +I
Sbjct: 372 DRVSWNSILTGFSQMGFSEDALKLFGHMRSSLE-EIDDYAYSAVLRSCSDLAILQLGQQI 430

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           H   +K     + FVA+ L+ MY KCG I+DA   F    + SS+ WN+I+  +  HGQG
Sbjct: 431 HLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQG 490

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
           D AL+ F  M +  V+ DH+TFV++LTACSH GLV +G+     M+ ++GI P ++HY C
Sbjct: 491 DVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYAC 550

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
            VDLFGRAG+L  A   I +MP +P+A +   LLGACR  GN+EL A  + +L EV+ E 
Sbjct: 551 AVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEE 610

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
              YV++SN+Y ++ +W+    V  L R+R +KK PGWS IEV N+V  F   +R+HP  
Sbjct: 611 HCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYS 670

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           E +Y  L  L  +MK L  +     ++ DV
Sbjct: 671 EDVYQILGELMEEMKRLHSLASFDSLMHDV 700


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/683 (35%), Positives = 377/683 (55%), Gaps = 21/683 (3%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L  G ++H ++ KLGF  D  +  +L+ MY + G  ++A ++F  M  R+  SW A++ 
Sbjct: 232 SLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMV 291

Query: 218 GYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           G+ Q G+A   L +L EMR     + +  T+++ L  C  ++++ +G+ IH   V+ G E
Sbjct: 292 GFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYE 351

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFD-QMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
            +  V+++L+ +Y+K G +  A RVFD   + R + +WN++I+ Y  +     A   F  
Sbjct: 352 EHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGHGRDALLVFRE 411

Query: 336 MQQAGI------QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVV 388
           M++         QPD  T  SL      L   R    VH  +   G+    + I+  A+V
Sbjct: 412 MRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALV 471

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           DMY K G +  A  VFE L  K+ I W T++ G+AQ G   EA+E+F+          + 
Sbjct: 472 DMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSG-ARADA 530

Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
               SI+   +    + QG ++H   +K+    DV     +VDMY KCG  D+A  +F +
Sbjct: 531 HVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFRE 590

Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           +P  + V W  +I+  G HG G +A+  F +M   GV PD +T+++LL+ACSH+GLV E 
Sbjct: 591 IPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC 650

Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
           +RYF  ++ +  ++P  +HY CMVDL GRAG L  A + I+ MP+ P   +W  LL ACR
Sbjct: 651 RRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACR 710

Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
           +H ++ +G  A D L  +D +N   YV +SN++A  G W    +VR   R RGLKK  G 
Sbjct: 711 VHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGC 770

Query: 689 SSIEVNNKVDIFYTGN--RTHPKYEKIYDELRNLTAKMKS-LGYVPDK-SFVLQDVEEDE 744
           S +E+  +V  FY G     HP+   I   LR++  +++  LGY  D   F L DV+E+ 
Sbjct: 771 SWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQFALHDVDEES 830

Query: 745 KEHILTSHSERLAIAFGIISSPP-------KSPIQIFKNLRVCGDCHNWTKFISQITERE 797
           +   L +HSERLA+   ++ +         + PI+++KNLRVCGDCH + K +S +  R 
Sbjct: 831 RAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFFKGLSAVVRRA 890

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           ++VRD+NRFH F+ G CSC DYW
Sbjct: 891 LVVRDANRFHRFEHGTCSCKDYW 913



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 264/566 (46%), Gaps = 44/566 (7%)

Query: 52  DLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           DL ++  K   ++   +LH  L   G          L++ YA  G+L  +   F  +  R
Sbjct: 222 DLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDR 281

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKI 165
           NV +W +++  +++ G  +  +    +    S   P+ YT    LKAC    ++  G  I
Sbjct: 282 NVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGI 341

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQSGN 224
           H   ++ G+E    VA+SL+ +Y + G    AR++FD   + R   +WNAMISGY  +G+
Sbjct: 342 HGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAGH 401

Query: 225 AVEALDILDEMRLEGV------SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF- 277
             +AL +  EMR            D  T AS+L  C        G  +H  +   G    
Sbjct: 402 GRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTA 461

Query: 278 -NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N  ++  L++MY K G +  A++VF+++  ++ + W +++  + Q    + A   F   
Sbjct: 462 SNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRF 521

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
            ++G + D   L S+  ++A        R VH + ++      DV  GN++VDMY K G+
Sbjct: 522 WRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSP-AGTDVSAGNSIVDMYLKCGL 580

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
            + A  +F  +P ++V+SW T+I G  ++GL  EA+ +F+ M     + P++ TY+++L 
Sbjct: 581 PDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEM-RAGGVEPDEVTYLALLS 639

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVP 510
           A SH G + +      R   +C+  D  V        C+VD+ G+ G + +A  L   +P
Sbjct: 640 ACSHAGLVDE-----CRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMP 694

Query: 511 RSSSVP-WNAIISCHGIHGQGDKALNFFRQMLD-----EGVRPDHITFVSLLTACSHSGL 564
              +V  W  ++S   +H    K +   R+  D     +G  P  + +V+L    + +G 
Sbjct: 695 MEPTVGVWQTLLSACRVH----KDVAVGREAGDVLLAIDGDNP--VNYVTLSNVFAEAGA 748

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGC 590
             E  +    M+   G+K   K  GC
Sbjct: 749 WRECHKVRDAMRRR-GLK---KQGGC 770



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 203/424 (47%), Gaps = 16/424 (3%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A +L   A+  ++  G+ +H  + K G   +  + NNLI+MYAK G +  A  VF  M 
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMR 279

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSR 365
           +R+VVSW +++  + Q  D          M+ A    P+  TL +         D     
Sbjct: 280 DRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE--GLPVKDVISWNTLITGYA 423
            +HG  +R G + E  ++ +++V +Y+K G I  A  VF+  GL  + + +WN +I+GYA
Sbjct: 340 GIHGLCVRTG-YEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLG-RGLATWNAMISGYA 397

Query: 424 QNGLASEAIEVFQMMEEC-----NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN- 477
             G   +A+ VF+ M        ++  P++ T+ S+L A   +GA R+G ++HA +  + 
Sbjct: 398 HAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASG 457

Query: 478 -CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
                +  +A  LVDMY KCGR+  AM +F ++ R +++ W  ++  H   GQ  +AL  
Sbjct: 458 FSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALEL 517

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           FR+    G R D     S++   +   LV +G R  H    +      +     +VD++ 
Sbjct: 518 FRRFWRSGARADAHVLSSIVGVLADFALVEQG-RQVHCYGVKSPAGTDVSAGNSIVDMYL 576

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG-NMELGAVASD-RLFEVDSENVGYY 654
           + G    A    + +P R   S W  ++     HG   E  A+  + R   V+ + V Y 
Sbjct: 577 KCGLPDEAERMFREIPARNVVS-WTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYL 635

Query: 655 VLMS 658
            L+S
Sbjct: 636 ALLS 639


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/681 (35%), Positives = 383/681 (56%), Gaps = 10/681 (1%)

Query: 53  LFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR- 108
           L ++C     L   K +H  +V  G    +F    L+N Y +      ++  FD++    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKI 165
            +  WN +++ Y +     EA++ F +      L+PD YT+P VLKAC  L   V GK I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++K G   D+ V +SL+ MY +      A  LF++MP +D   WN +IS Y QSGN 
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EAL+    MR  G   + +T+ + +  CAR  ++  G+ IH  ++  G   + F+S+ L
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K G +  A+ VF+QM ++ VV+WNS+I+ Y    D I+    F  M   G++P L
Sbjct: 249 VDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTL 308

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            TL SL  + ++       + VHG+ +R      DV I ++++D+Y K G +  A  +F+
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNR-IQSDVFINSSLMDLYFKCGKVELAENIFK 367

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P   V+SWN +I+GY   G   EA+ +F  M + + + P+  T+ S+L A S + AL 
Sbjct: 368 LIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK-SYVEPDAITFTSVLTACSQLAALE 426

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +G +IH  +I+  L  +  V   L+DMY KCG +D+A S+F  +P+   V W ++I+ +G
Sbjct: 427 KGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYG 486

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HGQ   AL  F +ML   ++PD +TF+++L+AC H+GLV EG  YF+ M   +GI P +
Sbjct: 487 SHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRV 546

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMP-VRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           +HY C++DL GRAG L  A+  +Q  P +R D  +   L  ACR+H N++LGA  +  L 
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLI 606

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           + D ++   Y+L+SN+YA+  KW+ V  VRS  ++ GLKK PG S IE+N K+  F+  +
Sbjct: 607 DKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVED 666

Query: 705 RTHPKYEKIYDELRNLTAKMK 725
            +H   E ++  L  L+  M+
Sbjct: 667 NSHLHLELVFKCLSYLSDHME 687



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 273/489 (55%), Gaps = 13/489 (2%)

Query: 151 PVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM--P 205
           P+L+AC N   L  GK IH  V+ LG + D+F+  +L+++Y    L + A+ +FD+M  P
Sbjct: 8   PLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENP 67

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDE-MRLEGVSMDPITVASILPVCARSDNILSGL 264
              S  WN +++GY ++   VEAL++ ++ +    +  D  T  S+L  C      + G 
Sbjct: 68  CEIS-LWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGK 126

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           +IH  +VK GL  ++ V ++L+ MYAK      A+ +F++M E+DV  WN++I+ Y QS 
Sbjct: 127 MIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSG 186

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +   A  +F  M++ G +P+ +T+ +  S  A+L D      +H  ++  G F+ D  I 
Sbjct: 187 NFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSG-FLLDSFIS 245

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE- 443
           +A+VDMY K G +  A  VFE +P K V++WN++I+GY   G +   I++F+ M   NE 
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMY--NEG 303

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + P   T  S++   S    L +G  +H   I+N +  DVF+ + L+D+Y KCG+++ A 
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAE 363

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           ++F  +P+S  V WN +IS +   G+  +AL  F +M    V PD ITF S+LTACS   
Sbjct: 364 NIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLA 423

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            + +G+   +++ E+  +  +    G ++D++ + G +  A +  + +P R D   W ++
Sbjct: 424 ALEKGEEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSM 481

Query: 624 LGACRIHGN 632
           + A   HG 
Sbjct: 482 ITAYGSHGQ 490



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           MD   +  +L  C  S ++  G LIH  +V  GL+ ++F+  NLIN+Y    +  HA  V
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60

Query: 302 FDQMMERDVVS-WNSIIAAYEQSNDPITAHGFFTT-MQQAGIQPDLLTLVSLTSIVAQLN 359
           FD M     +S WN ++A Y ++   + A   F   +    ++PD  T  S+      L 
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                + +H  +++ G  M D+++G+++V MYAK      A  +F  +P KDV  WNT+I
Sbjct: 121 KYVLGKMIHTCLVKTGLMM-DIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y Q+G   EA+E F +M       PN  T  + + + + +  L +G++IH  +I +  
Sbjct: 180 SCYYQSGNFKEALEYFGLMRRFG-FEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D F+++ LVDMYGKCG ++ A+ +F Q+P+ + V WN++IS +G+ G     +  F++
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKR 298

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M +EGV+P   T  SL+  CS S  + EG ++ H       I+  +     ++DL+ + G
Sbjct: 299 MYNEGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQSDVFINSSLMDLYFKCG 357

Query: 600 HLGMAHNFIQNMP----------------------------------VRPDASIWGALLG 625
            + +A N  + +P                                  V PDA  + ++L 
Sbjct: 358 KVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLT 417

Query: 626 ACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           AC     +E G    + + E  +D+  V    L+ ++YA  G    VDE  S+ +    +
Sbjct: 418 ACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALL-DMYAKCG---AVDEAFSVFKCLPKR 473

Query: 684 KTPGWSSI 691
               W+S+
Sbjct: 474 DLVSWTSM 481



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 156/318 (49%), Gaps = 11/318 (3%)

Query: 44  ESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E   +       SC +L  + R   +H  L+ SG +   F S+ LV+ Y   G L  +  
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIE 263

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKACR- 157
            F+ +  + V  WNSMIS Y   G   +++ C   F      G++P   T   ++  C  
Sbjct: 264 VFEQMPKKTVVAWNSMISGY---GLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSR 320

Query: 158 --NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
              L++GK +H   ++   + DVF+ +SL+ +Y + G   +A  +F  +P     SWN M
Sbjct: 321 SARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVM 380

Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           ISGY   G   EAL +  EMR   V  D IT  S+L  C++   +  G  IH  I++  L
Sbjct: 381 ISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKL 440

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           + N  V   L++MYAK G +  A  VF  + +RD+VSW S+I AY        A   F  
Sbjct: 441 DNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAE 500

Query: 336 MQQAGIQPDLLTLVSLTS 353
           M Q+ ++PD +T +++ S
Sbjct: 501 MLQSNMKPDRVTFLAILS 518


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/645 (36%), Positives = 369/645 (57%), Gaps = 38/645 (5%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D F   ++L +Y + GL    R +FD+MP RDS S+N +ISG+  +G    AL +   M+
Sbjct: 88  DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            EG+     T  S+L  C +  ++  G  IH  I+   L  N+FV N L ++YA+ G + 
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A R+FD+M+ R+VV+WN +I+ Y ++  P      F  MQ + ++PD +T         
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVT--------- 258

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                                       ++V+  Y + G I+ A  VF  +  KD + W 
Sbjct: 259 ---------------------------ASSVLGAYIQAGYIDEARKVFGEIREKDEVCWT 291

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            +I G AQNG   +A+ +F  M   N   P+  T  S++ + + + +L  G  +H +   
Sbjct: 292 IMIVGCAQNGKEEDALLLFSEMLLENA-RPDGYTISSVVSSCAKLASLYHGQVVHGKAFL 350

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             +  D+ V++ LVDMY KCG   DA ++F  +   + V WN++I  + ++GQ  +AL+ 
Sbjct: 351 MGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSL 410

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           +  ML+E ++PD +TFV +L+AC H+GLV EG+ YF  M ++ G++P   HY CMV+LFG
Sbjct: 411 YENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFG 470

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           R+GH+  A + I +M   P++ IW  +L  C + G+++ G +A+  L E++  N   Y++
Sbjct: 471 RSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIM 530

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SN+YA  G+W+ V  +RSL + + +KK   +S IE++N+V  F   +RTHP  + I+ +
Sbjct: 531 LSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQ 590

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK-SPIQIFK 775
           L  L  K++  G+ P+ + VL D  EDEK   +  HSE+LA+A+G+I  P   +PI+I K
Sbjct: 591 LNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIK 650

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           N+R C DCH + KF+S IT R +I+RDSNRFHHF +G CSC DYW
Sbjct: 651 NIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 229/484 (47%), Gaps = 74/484 (15%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG---------- 124
           K    F   +L+N YA  G++S +R  FD ++ R+ ++WN+M+S+Y + G          
Sbjct: 54  KPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFD 113

Query: 125 ---------------------RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
                                R   A+  F +     GL+P  YT   VL AC  L+D  
Sbjct: 114 NMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ-KEGLKPTEYTHVSVLNACTQLLDLR 172

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            GK+IH  ++      +VFV  +L  +Y R G  + AR+LFD M +R+  +WN MISGY 
Sbjct: 173 RGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYL 232

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           ++    + +D+  EM++  +  D +T +S+L                             
Sbjct: 233 KNRQPEKCIDLFHEMQVSNLKPDQVTASSVL----------------------------- 263

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
                   Y + G +  A +VF ++ E+D V W  +I    Q+     A   F+ M    
Sbjct: 264 ------GAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLEN 317

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
            +PD  T+ S+ S  A+L    + + VHG     G   +D+++ +A+VDMY K G+   A
Sbjct: 318 ARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMG-VNDDLLVSSALVDMYCKCGVTRDA 376

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +F  +  ++V+SWN++I GYA NG   EA+ +++ M E N + P+  T+V +L A  H
Sbjct: 377 WTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEEN-LKPDSVTFVGVLSACVH 435

Query: 461 VGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWN 518
            G + +G +    +  ++ L        C+V+++G+ G +D A+ L   + +  +S+ W 
Sbjct: 436 AGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWT 495

Query: 519 AIIS 522
            ++S
Sbjct: 496 TVLS 499



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/456 (25%), Positives = 200/456 (43%), Gaps = 72/456 (15%)

Query: 53  LFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           +  +CT+L  ++R   +H  +++      VF    L + YA  G++  +R  FD +  RN
Sbjct: 161 VLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRN 220

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSV 169
           V TWN MIS Y++  +  + +D F++  + S L+PD  T                     
Sbjct: 221 VVTWNLMISGYLKNRQPEKCIDLFHEMQV-SNLKPDQVT--------------------- 258

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
                      A+S+L  Y + G  + ARK+F ++  +D   W  MI G  Q+G   +AL
Sbjct: 259 -----------ASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDAL 307

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            +  EM LE    D  T++S++  CA+  ++  G ++H      G+  +L VS+ L++MY
Sbjct: 308 LLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMY 367

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G+ R A  +F  M  R+VVSWNS+I  Y  +   + A   +  M +  ++PD +T V
Sbjct: 368 CKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFV 427

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            + S             VH  ++  G              M  + G+           P 
Sbjct: 428 GVLSAC-----------VHAGLVEEG--------KEYFCSMSDQHGL----------EPT 458

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
            D   +  ++  + ++G   +A+++   M +     PN   + ++L      G ++ G +
Sbjct: 459 PD--HYACMVNLFGRSGHMDKAVDLISSMSQ----EPNSLIWTTVLSVCVMKGDIKHG-E 511

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           + AR +     F+      L +MY   GR  D  S+
Sbjct: 512 MAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASI 547


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/647 (35%), Positives = 359/647 (55%), Gaps = 37/647 (5%)

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
           V +   +   +   CQ     EA+++L        +      ++++  C R   +  G  
Sbjct: 52  VSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSAR---VYSTLIAACVRHRALELGRR 108

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAK-------------------------------FGM 294
           +H +         +F+SN L++MYAK                                G 
Sbjct: 109 VHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGR 168

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTS 353
           +  A ++FD+M +RD  SWN+ I+ Y   N P  A   F  MQ+      +  TL S  +
Sbjct: 169 LEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALA 228

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A +   R  + +HG+++R    +++V+  +A++D+Y K G ++ A  +F+ +  +DV+
Sbjct: 229 ASAAIPCLRLGKEIHGYLIRTELNLDEVVW-SALLDLYGKCGSLDEARGIFDQMKDRDVV 287

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW T+I    ++G   E   +F+ + +   + PN+ T+  +L A +   A   G ++H  
Sbjct: 288 SWTTMIHRCFEDGRREEGFLLFRDLMQSG-VRPNEYTFAGVLNACADHAAEHLGKEVHGY 346

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           ++        F  + LV MY KCG    A  +F ++ +   V W ++I  +  +GQ D+A
Sbjct: 347 MMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEA 406

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L+FF  +L  G +PD +T+V +L+AC+H+GLV +G  YFH ++E+ G+     HY C++D
Sbjct: 407 LHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVID 466

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L  R+G    A N I NMPV+PD  +W +LLG CRIHGN+EL   A+  L+E++ EN   
Sbjct: 467 LLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPAT 526

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           Y+ ++NIYAN G W  V  VR    + G+ K PG S IE+  +V +F  G+ +HPK   I
Sbjct: 527 YITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDI 586

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
           ++ L  L+ K+K  GYVPD +FVL DVEE++KE  L  HSE+LA+ FGIIS+PP +PI++
Sbjct: 587 HEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKV 646

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FKNLR C DCH   K+IS+I +R+I VRDSNRFH F+DG CSC DYW
Sbjct: 647 FKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 235/495 (47%), Gaps = 50/495 (10%)

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV 169
           +   + V  +  R+ EAV+  ++    +  RP    +  ++ AC   R L  G+++H   
Sbjct: 58  FEEAVDVLCQQKRVKEAVELLHR----TDHRPSARVYSTLIAACVRHRALELGRRVHAHT 113

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
               F   VF++  LL MY + G    A+ LFD+M  RD  SWN MI GY + G   +A 
Sbjct: 114 KASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQAR 173

Query: 230 DILDEM--------------------------------RLEGVSMDPITVASILPVCARS 257
            + DEM                                R E  S +  T++S L   A  
Sbjct: 174 KLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAI 233

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  IH Y+++  L  +  V + L+++Y K G +  A  +FDQM +RDVVSW ++I
Sbjct: 234 PCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMI 293

Query: 318 AAYEQSNDPITAHGF--FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
             +    D     GF  F  + Q+G++P+  T   + +  A        + VHG++M  G
Sbjct: 294 --HRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAG 351

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +      I +A+V MY+K G    A  VF  +   D++SW +LI GYAQNG   EA+  F
Sbjct: 352 YDPGSFAI-SALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFF 410

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYG 494
           +++ +     P+Q TYV +L A +H G + +G++  H+   K+ L        C++D+  
Sbjct: 411 ELLLQSG-TKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLA 469

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH-ITF 552
           + GR  +A ++   +P +     W +++    IHG  + A    + + +  + P++  T+
Sbjct: 470 RSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYE--IEPENPATY 527

Query: 553 VSLLTACSHSGLVSE 567
           ++L    +++GL SE
Sbjct: 528 ITLANIYANAGLWSE 542



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 216/492 (43%), Gaps = 56/492 (11%)

Query: 8   CKDRRLCKLLPLLQA--HRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKR 65
           C+ +R+ + + LL    HRP  SA   S  I+  C+ + + E+               +R
Sbjct: 66  CQQKRVKEAVELLHRTDHRP--SARVYSTLIAA-CVRHRALELG--------------RR 108

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HA    S  +  VF S +L++ YA  G L  ++  FD + +R++ +WN+MI  Y + GR
Sbjct: 109 VHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGR 168

Query: 126 LSEAVDCFYQ------FTLTSGL---------RPDFYTFPPVLKACRN------------ 158
           L +A   F +      F+  + +         R     F  + +  R+            
Sbjct: 169 LEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALA 228

Query: 159 -------LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
                  L  GK+IH  +++     D  V ++LL +Y + G  + AR +FD M  RD  S
Sbjct: 229 ASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVS 288

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           W  MI    + G   E   +  ++   GV  +  T A +L  CA       G  +H Y++
Sbjct: 289 WTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMM 348

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
             G +   F  + L++MY+K G  R A RVF++M + D+VSW S+I  Y Q+  P  A  
Sbjct: 349 HAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALH 408

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
           FF  + Q+G +PD +T V + S                 I  +   M        V+D+ 
Sbjct: 409 FFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLL 468

Query: 392 AKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           A+ G    A  + + +PVK D   W +L+ G   +G    A    + + E    NP   T
Sbjct: 469 ARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENP--AT 526

Query: 451 YVSILPAYSHVG 462
           Y+++   Y++ G
Sbjct: 527 YITLANIYANAG 538


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/543 (41%), Positives = 325/543 (59%), Gaps = 2/543 (0%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           N+   N L   Y K G +  A ++FD+M ER+V +WN+++A          + GFF  M+
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 165

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G+ PD   L S+    A L D    R VH +++R G    D+ +G+++  MY + G +
Sbjct: 166 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGCL 224

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
               AV   LP   ++S NT+I G  QNG +  A+E F MM     +  +  T+VS + +
Sbjct: 225 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVG-VAADVVTFVSAISS 283

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S + AL QG +IH +V+K  +   V V TCLV MY +CG + D+  +F+    S +   
Sbjct: 284 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 343

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +A+IS +G HG G KA+  F+QM++ G  P  +TF++LL ACSHSGL  EG   F +M +
Sbjct: 344 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTK 403

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            +G++P +KHY C+VDL GR+G L  A   I +MP+ PD  IW  LL AC+   N ++  
Sbjct: 404 TYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAE 463

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             + R+ E+D  +   YVL+SNI A   +W  V EVR   RD  ++K PG S +E+   +
Sbjct: 464 RIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHI 523

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F TG+ +HP+ ++I + L  + AK++  GY PD S VL D+E++EKE  L+ HSE+LA
Sbjct: 524 HQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLA 583

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAF  +S P   PI++ KNLRVC DCH   K +SQ+T REI+VRD +RFHHFKDG CSC 
Sbjct: 584 IAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCR 643

Query: 818 DYW 820
           DYW
Sbjct: 644 DYW 646



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 208/418 (49%), Gaps = 17/418 (4%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLG-FEWDVFVAASLLHMY 188
            + F  TSG   D +T   ++ A  +L D    +++   + +     W++         Y
Sbjct: 63  LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG-----Y 117

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
            + G    ARKLFD+MP R+  +WNAM++G    G   E+L    +MR EG+  D   + 
Sbjct: 118 IKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLG 177

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S+   CA   ++++G  +H Y+V+ GL+ ++ V ++L +MY + G ++    V   +   
Sbjct: 178 SVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 237

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
            +VS N+IIA   Q+ D   A  +F  M+  G+  D++T VS  S  + L      + +H
Sbjct: 238 SIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIH 297

Query: 369 GFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           G +M+ G  ++ V+ +   +V MY++ G +  +  VF G    D    + +I+ Y  +G 
Sbjct: 298 GQVMKAG--VDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGH 355

Query: 428 ASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFV 485
             +AIE+F QMM    E  P+  T++++L A SH G   +G+     + K   +   V  
Sbjct: 356 GQKAIELFKQMMNGGAE--PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKH 413

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
            TC+VD+ G+ G +D+A +L   +P +   V W  ++S        D A    +++++
Sbjct: 414 YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 471



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 188/414 (45%), Gaps = 50/414 (12%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF------- 102
           F  LF++C  L  +++LHA    SG     F++  L+  YA+LGDL+ +R  F       
Sbjct: 47  FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106

Query: 103 ------------------------DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
                                   D +  RNV TWN+M++     G   E++  F+    
Sbjct: 107 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLG-FFLDMR 165

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             G+ PD +    V + C   R++V G+++H  V++ G + D+ V +SL HMY R G   
Sbjct: 166 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 225

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
               +   +P     S N +I+G  Q+G++  AL+    MR  GV+ D +T  S +  C+
Sbjct: 226 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  IH  ++K G++  + V   L++MY++ G +  + RVF      D    ++
Sbjct: 286 DLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSA 345

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL------TSIVAQLNDCRNSRSVHG 369
           +I+AY        A   F  M   G +P  +T ++L      + +  +  DC        
Sbjct: 346 MISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFE------ 399

Query: 370 FIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
            +M + + M+  +     VVD+  + G ++ A A+   +P+  D + W TL++ 
Sbjct: 400 -LMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score = 40.4 bits (93), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           ALR   ++HA    +    D F A  L+  Y   G +  A  LF ++PR + + WN +  
Sbjct: 56  ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFG 115

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
             G    GD  L   R++ DE    +  T+ +++   ++ G   E   +F  M+ E G+ 
Sbjct: 116 --GYIKNGD--LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRRE-GMH 170

Query: 583 P 583
           P
Sbjct: 171 P 171


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/543 (41%), Positives = 325/543 (59%), Gaps = 2/543 (0%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           N+   N L   Y K G +  A ++FD+M ER+V +WN+++A          + GFF  M+
Sbjct: 168 NVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR 227

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G+ PD   L S+    A L D    R VH +++R G    D+ +G+++  MY + G +
Sbjct: 228 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGCL 286

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
               AV   LP   ++S NT+I G  QNG +  A+E F MM     +  +  T+VS + +
Sbjct: 287 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVG-VAADVVTFVSAISS 345

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S + AL QG +IH +V+K  +   V V TCLV MY +CG + D+  +F+    S +   
Sbjct: 346 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 405

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +A+IS +G HG G KA+  F+QM++ G  P  +TF++LL ACSHSGL  EG   F +M +
Sbjct: 406 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTK 465

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            +G++P +KHY C+VDL GR+G L  A   I +MP+ PD  IW  LL AC+   N ++  
Sbjct: 466 TYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAE 525

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             + R+ E+D  +   YVL+SNI A   +W  V EVR   RD  ++K PG S +E+   +
Sbjct: 526 RIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHI 585

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F TG+ +HP+ ++I + L  + AK++  GY PD S VL D+E++EKE  L+ HSE+LA
Sbjct: 586 HQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLA 645

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAF  +S P   PI++ KNLRVC DCH   K +SQ+T REI+VRD +RFHHFKDG CSC 
Sbjct: 646 IAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCR 705

Query: 818 DYW 820
           DYW
Sbjct: 706 DYW 708



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 208/418 (49%), Gaps = 17/418 (4%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLG-FEWDVFVAASLLHMY 188
            + F  TSG   D +T   ++ A  +L D    +++   + +     W++         Y
Sbjct: 125 LHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGG-----Y 179

Query: 189 CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVA 248
            + G    ARKLFD+MP R+  +WNAM++G    G   E+L    +MR EG+  D   + 
Sbjct: 180 IKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLG 239

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER 308
           S+   CA   ++++G  +H Y+V+ GL+ ++ V ++L +MY + G ++    V   +   
Sbjct: 240 SVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSL 299

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
            +VS N+IIA   Q+ D   A  +F  M+  G+  D++T VS  S  + L      + +H
Sbjct: 300 SIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIH 359

Query: 369 GFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           G +M+ G  ++ V+ +   +V MY++ G +  +  VF G    D    + +I+ Y  +G 
Sbjct: 360 GQVMKAG--VDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGH 417

Query: 428 ASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFV 485
             +AIE+F QMM    E  P+  T++++L A SH G   +G+     + K   +   V  
Sbjct: 418 GQKAIELFKQMMNGGAE--PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKH 475

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
            TC+VD+ G+ G +D+A +L   +P +   V W  ++S        D A    +++++
Sbjct: 476 YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIE 533



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 187/414 (45%), Gaps = 50/414 (12%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF------- 102
           F  LF++C  L  +++LHA    SG     F++  L+  YA+LGDL+ +R  F       
Sbjct: 109 FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 168

Query: 103 ------------------------DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
                                   D +  RNV TWN+M++     G   E++  F     
Sbjct: 169 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMR- 227

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             G+ PD +    V + C   R++V G+++H  V++ G + D+ V +SL HMY R G   
Sbjct: 228 REGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 287

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
               +   +P     S N +I+G  Q+G++  AL+    MR  GV+ D +T  S +  C+
Sbjct: 288 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 347

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  IH  ++K G++  + V   L++MY++ G +  + RVF      D    ++
Sbjct: 348 DLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSA 407

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL------TSIVAQLNDCRNSRSVHG 369
           +I+AY        A   F  M   G +P  +T ++L      + +  +  DC        
Sbjct: 408 MISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFE------ 461

Query: 370 FIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
            +M + + M+  +     VVD+  + G ++ A A+   +P+  D + W TL++ 
Sbjct: 462 -LMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           ALR   ++HA    +    D F A  L+  Y   G +  A  LF ++PR + + WN +  
Sbjct: 118 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFG 177

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
             G    GD  L   R++ DE    +  T+ +++   ++ G   E   +F  M+ E G+ 
Sbjct: 178 --GYIKNGD--LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRRE-GMH 232

Query: 583 P 583
           P
Sbjct: 233 P 233


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/678 (35%), Positives = 383/678 (56%), Gaps = 6/678 (0%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C+ L+       LH  ++VSG     + ++ L+NFYA  G    +R  FD++ 
Sbjct: 64  FPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMP 123

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
            RNV  W ++I  Y R GR+ EA   F +     G++P   T   +L     L   + +H
Sbjct: 124 ERNVVPWTTIIGCYSRTGRVPEAFSLFDEMR-RQGIQPSSVTVLSLLFGVSELAHVQCLH 182

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +  GF  D+ ++ S+L++Y + G    +RKLFD M  RD  SWN++IS Y Q GN  
Sbjct: 183 GCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNIC 242

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           E L +L  MRL+G    P T  S+L V A    +  G  +H  I++ G   +  V  +LI
Sbjct: 243 EVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLI 302

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            +Y K G +  A R+F++  ++DVV W ++I+   Q+     A   F  M + G++P   
Sbjct: 303 VVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTA 362

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T+ S+ +  AQL       S+ G+I+R+   + DV   N++V MYAK G ++ +  VF+ 
Sbjct: 363 TMASVITACAQLGSYNLGTSILGYILRQELPL-DVATQNSLVTMYAKCGHLDQSSIVFDM 421

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +  +D++SWN ++TGYAQNG   EA+ +F  M   N+  P+  T VS+L   +  G L  
Sbjct: 422 MNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQ-TPDSITIVSLLQGCASTGQLHL 480

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G  IH+ VI+N L   + V T LVDMY KCG +D A   F Q+P    V W+AII  +G 
Sbjct: 481 GKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGY 540

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG+G+ AL F+ + L+ G++P+H+ F+S+L++CSH+GLV +G   +  M ++FGI P L+
Sbjct: 541 HGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLE 600

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           H+ C+VDL  RAG +  A+N  +     P   + G +L ACR +GN ELG   ++ +  +
Sbjct: 601 HHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILML 660

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
              + G +V +++ YA++ KWE V E  +  R  GLKK PGWS I+++  +  F+T + +
Sbjct: 661 RPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNS 720

Query: 707 HPKYEKIYDELRNLTAKM 724
           HP++++I   L+ L  +M
Sbjct: 721 HPQFQEIVCTLKILRKEM 738



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 170/554 (30%), Positives = 288/554 (51%), Gaps = 12/554 (2%)

Query: 134 YQFTLTSGLRPDFYTFPPVLKACR--NLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
           Y   L + +  D YTFP +LKAC   NL   G  +H  +L  G   D ++A+SL++ Y +
Sbjct: 49  YASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINFYAK 108

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
           FG A+VARK+FD MP R+   W  +I  Y ++G   EA  + DEMR +G+    +TV S+
Sbjct: 109 FGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSL 168

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L   +   ++     +H   + +G   ++ +SN+++N+Y K G + ++ ++FD M  RD+
Sbjct: 169 LFGVSELAHVQC---LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDL 225

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSWNS+I+AY Q  +         TM+  G +    T  S+ S+ A   + +  R +HG 
Sbjct: 226 VSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQ 285

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           I+R G+++ D  +  +++ +Y K G I+ A  +FE    KDV+ W  +I+G  QNG A +
Sbjct: 286 ILRAGFYL-DAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADK 344

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A+ VF+ M +   + P+  T  S++ A + +G+   G  I   +++  L  DV     LV
Sbjct: 345 ALAVFRQMLKFG-VKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLV 403

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
            MY KCG +D +  +F  + R   V WNA+++ +  +G   +AL  F +M  +   PD I
Sbjct: 404 TMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSI 463

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           T VSLL  C+ +G +  G ++ H      G++P +     +VD++ + G L  A      
Sbjct: 464 TIVSLLQGCASTGQLHLG-KWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQ 522

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYYVLMSNIYANVGKWE 668
           MP   D   W A++     HG  E       +  E  +   +V +  ++S+   N    +
Sbjct: 523 MPSH-DLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQ 581

Query: 669 GVDEVRSLARDRGL 682
           G++   S+ +D G+
Sbjct: 582 GLNIYESMTKDFGI 595



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 221/418 (52%), Gaps = 11/418 (2%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           + S NA I+ +   G   + L     M    V  D  T  S+L  C+  +    GL +H 
Sbjct: 26  TNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQ 85

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
            I+  GL  + +++++LIN YAKFG    A +VFD M ER+VV W +II  Y ++     
Sbjct: 86  RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPE 145

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
           A   F  M++ GIQP  +T++SL   V++L    + + +HG  +  G FM D+ + N+++
Sbjct: 146 AFSLFDEMRRQGIQPSSVTVLSLLFGVSEL---AHVQCLHGCAILYG-FMSDINLSNSML 201

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME-ECNEINPN 447
           ++Y K G I  +  +F+ +  +D++SWN+LI+ YAQ G   E + + + M  +  E  P 
Sbjct: 202 NVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQ 261

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T+ S+L   +  G L+ G  +H ++++     D  V T L+ +Y K G+ID A  +F 
Sbjct: 262 --TFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFE 319

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           +      V W A+IS    +G  DKAL  FRQML  GV+P   T  S++TAC+  G  + 
Sbjct: 320 RSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNL 379

Query: 568 GQRYF-HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           G     +++++E  +    ++   +V ++ + GHL  + + + +M  R D   W A++
Sbjct: 380 GTSILGYILRQELPLDVATQN--SLVTMYAKCGHLDQS-SIVFDMMNRRDLVSWNAMV 434


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/696 (32%), Positives = 402/696 (57%), Gaps = 20/696 (2%)

Query: 141 GLRPDFYTFPPVLKAC--RNL-VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G R +   + P+L+ C  RNL  + + IH  ++K GF  D+FV   L+++Y + G+   A
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            K+FD++P R+  +W  +++GY Q+ + + AL +  +M   G      T+  +L  C+  
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            +I  G  +H Y++K+ ++F+  + N+L + Y+KF  +  A++ F  + E+DV+SW S+I
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           ++   +     +  FF  M   G++P+  TL S+ S    +        +H   ++ G +
Sbjct: 239 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG-Y 297

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-----------NG 426
              ++I N+++ +Y K G +  A  +FEG+   ++++WN +I G+A+           + 
Sbjct: 298 GSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHK 357

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
             S A+ +FQ +     + P+  T+ S+L   S++ AL QG +IH ++IK+ +  DV V 
Sbjct: 358 SGSTALAMFQKLYRSG-MKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 416

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           T LV MY KCG ID A   F ++P  + + W ++I+    HG   +AL  F  M   G++
Sbjct: 417 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 476

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +TFV +L+ACSH+GL  E   YF +MQ+++ IKP + H+ C++D++ R G +  A +
Sbjct: 477 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 536

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            +  M   P+ +IW  L+  CR HG  +LG  A+++L ++  ++V  YV + N++ + G+
Sbjct: 537 VVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGR 596

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V +VR L ++  + K   WS I +  KV  F   +++H +  ++Y  L  +  ++K+
Sbjct: 597 WKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKA 656

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           LGY P +  V    +E+ +E +L+S   HSE+LAIAFG+++ P  +PI++ K++ +C DC
Sbjct: 657 LGYEPIED-VEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDC 715

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           HN+ +FIS +  REI++RDS + H F +G CSCG Y
Sbjct: 716 HNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 279/548 (50%), Gaps = 29/548 (5%)

Query: 53  LFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L Q C   +     + +H  +V +G  + +F  T LVN Y+  G +  +   FD++  RN
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           V  W ++++ YV+      A+  F +  L +G  P  YT   VL AC +L     GK++H
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKM-LEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 188

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             ++K   ++D  +  SL   Y +F     A K F  +  +D  SW ++IS  C +G A 
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 248

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            +L    +M  +G+  +  T+ S+L  C     +  G  IH   +K G   ++ + N+++
Sbjct: 249 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 308

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ----SNDPITAH-------GFFTT 335
            +Y K G +  A ++F+ M   ++V+WN++IA + +    + D + AH         F  
Sbjct: 309 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQK 368

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           + ++G++PDL T  S+ S+ + L        +HG I++ G  + DV++G A+V MY K G
Sbjct: 369 LYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSG-VLADVVVGTALVSMYNKCG 427

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            I+ A   F  +P + +ISW ++ITG+A++GL+ +A+++F+ M     I PNQ T+V +L
Sbjct: 428 SIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG-IKPNQVTFVGVL 486

Query: 456 PAYSHVGALRQGIKIHARVIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-R 511
            A SH G   + +     + K        D F   CL+DMY + GR+++A  + +++   
Sbjct: 487 SACSHAGLADEALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLGRVEEAFDVVHKMNFE 544

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQR 570
            +   W+ +I+    HG+ D       Q+L   ++P  + T+VSLL     +G   +  +
Sbjct: 545 PNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLLNMHISAGRWKDVSK 602

Query: 571 YFHMMQEE 578
              +M+EE
Sbjct: 603 VRKLMKEE 610


>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/507 (43%), Positives = 317/507 (62%), Gaps = 2/507 (0%)

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           NS+I  Y  SN  + +   +T M + GI PD  T  ++   VAQL      +++H  I++
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G F  +V +  A+V+MY     ++ A  VF+ +P ++++SWN LITGY  N +  + I+
Sbjct: 171 MG-FESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVID 229

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
           VF+ M+      P + T V +L A +H+GAL QG  I   +  N L  +VFV T L+DMY
Sbjct: 230 VFREMQIAGA-KPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMY 288

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG +D+A  +F  +   +   WN +IS + ++G+G+ AL  F +M+ E  +PD +TF+
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFL 348

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L AC H GLV+EG+ YF  M+EEFG++P ++HYGCMVDL GRAG L  A   IQ M +
Sbjct: 349 GVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSM 408

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
           +PD  IW  LLGACRIHGN++LG  A  +L E++  N   YVL++N+YA   +W+ V EV
Sbjct: 409 QPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEV 468

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R +   R ++K PG SSIE++N V  F   N   P +E++Y  L ++  K+K  GYV D 
Sbjct: 469 REMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADT 528

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
                D+EE+EKEH L  HSE+LA+AFG++ SP    ++I KNLR+C DCH + K +S++
Sbjct: 529 GMASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKV 588

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
             R+I VRD NRFHHF  G CSC DYW
Sbjct: 589 YRRDISVRDRNRFHHFVGGACSCKDYW 615



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 6/324 (1%)

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           DS   N+MI  Y  S   + ++ I  +M   G+  D  T  ++L   A+      G  IH
Sbjct: 106 DSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIH 165

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
             I++ G E N++VS  L+NMY     +  A +VFD++ +R++VSWN++I  Y  +    
Sbjct: 166 CCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFR 225

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
                F  MQ AG +P  +T+V +    A L      R +  +I      + +V +G A+
Sbjct: 226 KVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRL-NVFVGTAL 284

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMYAK G+++ A  +F+ + VK+V +WN LI+GYA NG    A++ F  M    +  P+
Sbjct: 285 IDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRM-IMEKFKPD 343

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSL 505
           + T++ +L A  H G + +G + +   +K        +    C+VD+ G+ G +D+A  L
Sbjct: 344 EVTFLGVLCACCHQGLVNEG-RTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQL 402

Query: 506 FYQVP-RSSSVPWNAIISCHGIHG 528
              +  +   + W  ++    IHG
Sbjct: 403 IQAMSMQPDPIIWRELLGACRIHG 426



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 179/368 (48%), Gaps = 23/368 (6%)

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA----CRNLVDGKKIHCSV 169
           NSMI  Y    +   +V  + Q    +G+ PD  TFP VLK+    CR  + GK IHC +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQM-WKNGIFPDSSTFPTVLKSVAQLCRQEL-GKAIHCCI 168

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +++GFE +V+V+ +L++MY      + AR++FD++P R+  SWNA+I+GY  +    + +
Sbjct: 169 IQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVI 228

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+  EM++ G     +T+  +L  CA    +  G  I  YI  + L  N+FV   LI+MY
Sbjct: 229 DVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMY 288

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G++  A ++F  M  ++V +WN +I+ Y  +    +A   F+ M     +PD +T +
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFL 348

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            +             R+    +         +     +VD+  + G ++ A  + + + +
Sbjct: 349 GVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSM 408

Query: 410 K-DVISWNTLITGYAQNG---LASEAIEVFQMMEECNEINPNQG-TYVSILPAYSH---- 460
           + D I W  L+     +G   L   AI+         E+ PN G  YV +   Y+     
Sbjct: 409 QPDPIIWRELLGACRIHGNIQLGEFAIKKLL------ELEPNNGENYVLLANLYARDQRW 462

Query: 461 --VGALRQ 466
             VG +R+
Sbjct: 463 DKVGEVRE 470



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 12/264 (4%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  ++  G    V+ ST LVN Y     +S +R  FD I  RN+ +WN++I+ Y   
Sbjct: 162 KAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHN 221

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
               + +D F +  + +G +P   T   VL AC +   L  G+ I   +       +VFV
Sbjct: 222 RMFRKVIDVFREMQI-AGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFV 280

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY + G+ + A K+F  M V++  +WN +ISGY  +G    AL     M +E  
Sbjct: 281 GTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKF 340

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS----NNLINMYAKFGMMR 296
             D +T   +L  C     +  G     Y      EF L         ++++  + G + 
Sbjct: 341 KPDEVTFLGVLCACCHQGLVNEG---RTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLD 397

Query: 297 HALRVFDQM-MERDVVSWNSIIAA 319
            A ++   M M+ D + W  ++ A
Sbjct: 398 EAQQLIQAMSMQPDPIIWRELLGA 421


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/696 (32%), Positives = 402/696 (57%), Gaps = 20/696 (2%)

Query: 141 GLRPDFYTFPPVLKAC--RNL-VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G R +   + P+L+ C  RNL  + + IH  ++K GF  D+FV   L+++Y + G+   A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
            K+FD++P R+  +W  +++GY Q+ + + AL +  +M   G      T+  +L  C+  
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            +I  G  +H Y++K+ ++F+  + N+L + Y+KF  +  A++ F  + E+DV+SW S+I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
           ++   +     +  FF  M   G++P+  TL S+ S    +        +H   ++ G +
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG-Y 291

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ-----------NG 426
              ++I N+++ +Y K G +  A  +FEG+   ++++WN +I G+A+           + 
Sbjct: 292 GSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHK 351

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
             S A+ +FQ +     + P+  T+ S+L   S++ AL QG +IH ++IK+ +  DV V 
Sbjct: 352 SGSTALAMFQKLYRSG-MKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 410

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           T LV MY KCG ID A   F ++P  + + W ++I+    HG   +AL  F  M   G++
Sbjct: 411 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 470

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ +TFV +L+ACSH+GL  E   YF +MQ+++ IKP + H+ C++D++ R G +  A +
Sbjct: 471 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 530

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            +  M   P+ +IW  L+  CR HG  +LG  A+++L ++  ++V  YV + N++ + G+
Sbjct: 531 VVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGR 590

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V +VR L ++  + K   WS I +  KV  F   +++H +  ++Y  L  +  ++K+
Sbjct: 591 WKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKA 650

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
           LGY P +  V    +E+ +E +L+S   HSE+LAIAFG+++ P  +PI++ K++ +C DC
Sbjct: 651 LGYEPIED-VEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDC 709

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           HN+ +FIS +  REI++RDS + H F +G CSCG Y
Sbjct: 710 HNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 279/548 (50%), Gaps = 29/548 (5%)

Query: 53  LFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L Q C   +     + +H  +V +G  + +F  T LVN Y+  G +  +   FD++  RN
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           V  W ++++ YV+      A+  F +  L +G  P  YT   VL AC +L     GK++H
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKM-LEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 182

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             ++K   ++D  +  SL   Y +F     A K F  +  +D  SW ++IS  C +G A 
Sbjct: 183 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 242

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            +L    +M  +G+  +  T+ S+L  C     +  G  IH   +K G   ++ + N+++
Sbjct: 243 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 302

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ----SNDPITAH-------GFFTT 335
            +Y K G +  A ++F+ M   ++V+WN++IA + +    + D + AH         F  
Sbjct: 303 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQK 362

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           + ++G++PDL T  S+ S+ + L        +HG I++ G  + DV++G A+V MY K G
Sbjct: 363 LYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSG-VLADVVVGTALVSMYNKCG 421

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            I+ A   F  +P + +ISW ++ITG+A++GL+ +A+++F+ M     I PNQ T+V +L
Sbjct: 422 SIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG-IKPNQVTFVGVL 480

Query: 456 PAYSHVGALRQGIKIHARVIKNC---LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-R 511
            A SH G   + +     + K        D F   CL+DMY + GR+++A  + +++   
Sbjct: 481 SACSHAGLADEALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLGRVEEAFDVVHKMNFE 538

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQR 570
            +   W+ +I+    HG+ D       Q+L   ++P  + T+VSLL     +G   +  +
Sbjct: 539 PNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLLNMHISAGRWKDVSK 596

Query: 571 YFHMMQEE 578
              +M+EE
Sbjct: 597 VRKLMKEE 604


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 394/687 (57%), Gaps = 11/687 (1%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC  L  +   + +H      G    +F  + L+  YAN G L  +R  FD ++
Sbjct: 149 FPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA 208

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT---FPPVLKACRNLVDGK 163
            R+   WN M+  YV+ G +S AV+ F      SG  P+F T   F  V     +L  G 
Sbjct: 209 ERDCVLWNVMMDGYVKAGSVSSAVELFGDMR-ASGCEPNFATLACFLSVSATESDLFFGV 267

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H   +K G E +V VA +L+ MY +    +   KLF  MP  D  +WN MISG  Q+G
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL +  +M+  G+  D +T+ S+LP     +    G  +H YIV++ +  ++F+ +
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+++Y K   +R A  V+D     DVV  +++I+ Y  +     A   F  + + GI+P
Sbjct: 388 ALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRP 447

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + + + S+    A +   +  + +H + ++   +     + +A++DMYAK G ++ +  +
Sbjct: 448 NAVAIASVLPACASMAAMKLGQELHSYALKNA-YEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVG 462
           F  +  KD ++WN++I+ +AQNG   EA+ +F+  E C E +  +  T  S+L A + + 
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFR--EMCMEGVKYSNVTISSVLSACASLP 564

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           A+  G +IH  VIK  +  D+F  + L+DMYGKCG ++ A  +F  +P  + V WN+II+
Sbjct: 565 AIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIA 624

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G +G   ++++  R M +EG + DH+TF++L++AC+H+G V EG R F  M EE+ I 
Sbjct: 625 SYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIA 684

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++H+ CMVDL+ RAG L  A   I +MP +PDA IWGALL ACR+H N+EL  +AS  
Sbjct: 685 PRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQE 744

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           LF++D  N GYYVLMSNI A  G+W+GV +VR L +D  ++K PG+S ++VNN   +F  
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVA 804

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGY 729
            +++HP  E IY  L+++  +++  G+
Sbjct: 805 ADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 172/524 (32%), Positives = 293/524 (55%), Gaps = 10/524 (1%)

Query: 113 WNSMISVYVRCGRLSEAVDCFY--QFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHC 167
           WN +I      G    A+  FY   +   S   PD +TFP V+K+C  L     G+ +H 
Sbjct: 112 WNWLIRGLTMAGDYRSAL-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHR 170

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           +   LG + D+FV ++L+ MY   GL   AR++FD M  RD   WN M+ GY ++G+   
Sbjct: 171 TARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSS 230

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A+++  +MR  G   +  T+A  L V A   ++  G+ +H   VK+GLE  + V+N L++
Sbjct: 231 AVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVS 290

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK   +    ++F  M   D+V+WN +I+   Q+     A   F  MQ++GI+PD +T
Sbjct: 291 MYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVT 350

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           LVSL   +  LN     + +HG+I+R    M DV + +A+VD+Y K   +  A +V++  
Sbjct: 351 LVSLLPALTDLNGFNQGKELHGYIVRNCVHM-DVFLVSALVDIYFKCRAVRMAQSVYDSS 409

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
              DV+  +T+I+GY  NG++ EA+++F+ + E   I PN     S+LPA + + A++ G
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLE-QGIRPNAVAIASVLPACASMAAMKLG 468

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++H+  +KN      +V + L+DMY KCGR+D +  +F ++     V WN++IS    +
Sbjct: 469 QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQN 528

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G+ ++ALN FR+M  EGV+  ++T  S+L+AC+    +  G+   H +  +  I+  L  
Sbjct: 529 GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE-IHGVVIKGPIRADLFA 587

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
              ++D++G+ G+L  AH   ++MP + + S W +++ +   +G
Sbjct: 588 ESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYG 630



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 247/494 (50%), Gaps = 17/494 (3%)

Query: 152 VLKAC---RNLVDGKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLANVARKLFDDMPVR 207
           VL+ C    +L  G ++H   +  G    D  +   L+ MY        A  +F  +P R
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP-R 103

Query: 208 DSGS----WNAMISGYCQSGNAVEALDILDEMRLEGVSM--DPITVASILPVCARSDNIL 261
            + +    WN +I G   +G+   AL    +M     +   D  T   ++  CA    I 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G L+H      GL+ ++FV + LI MYA  G++  A +VFD M ERD V WN ++  Y 
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           ++    +A   F  M+ +G +P+  TL    S+ A  +D      +H   ++ G    +V
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG-LESEV 282

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            + N +V MYAK   ++    +F  +P  D+++WN +I+G  QNG   +A+ +F  M++ 
Sbjct: 283 AVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK- 341

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           + I P+  T VS+LPA + +    QG ++H  +++NC+  DVF+ + LVD+Y KC  +  
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRM 401

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A S++        V  + +IS + ++G   +A+  FR +L++G+RP+ +   S+L AC+ 
Sbjct: 402 AQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACAS 461

Query: 562 SGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
              +  GQ  + + ++  +  + +++    ++D++ + G L ++H     +  + D   W
Sbjct: 462 MAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAK-DEVTW 518

Query: 621 GALLGACRIHGNME 634
            +++ +   +G  E
Sbjct: 519 NSMISSFAQNGEPE 532


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/675 (37%), Positives = 374/675 (55%), Gaps = 48/675 (7%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN---VARKLFDDMPVRD 208
           +L  C++L   K+IH +VLKLG E D F+A  LLH +C   L++    A +LF   P  D
Sbjct: 11  LLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLH-HCAISLSDSLDYACRLFRYTPNPD 69

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIH 267
               N +I G  +S    ++L    EMR    S  D  + A I+   A   ++  G+ +H
Sbjct: 70  VFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLH 129

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
              + HGL+ +LFV   LI+MY + G +  A +VFD+M E + ++WN+++ A  +  D  
Sbjct: 130 CQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMK 189

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
                F          DL+ + +L S                      W        N +
Sbjct: 190 GGRELF----------DLMPVRNLMS----------------------W--------NVM 209

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +  Y K G +  A  +F  +P+KD +SW+T+I G+A NG   EA   F+ ++    + PN
Sbjct: 210 LAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQR-KGMRPN 268

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
           + +   +L A +  GAL  G  +H  + K+ L + V V   L+D Y KCG +  A  +F 
Sbjct: 269 ETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFE 328

Query: 508 QVPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
           ++    + V W ++++   +HG G++A+  F +M + G+RPD I F+SLL ACSH+GLV 
Sbjct: 329 RIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVE 388

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G  YF  M+  + I+P ++HYGCMVDL+GRAG L  A+ F+  MP+   A IW  LLGA
Sbjct: 389 QGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGA 448

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C +HG+++L     +RL E+D  N   +VL+SN YA  GKW+    VR    ++ + KTP
Sbjct: 449 CSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTP 508

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEK 745
           GWS IEV+  +  F  G + +   E+ Y +L+ +  +++   GYVP+   VL D+EE+EK
Sbjct: 509 GWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVLHDIEEEEK 568

Query: 746 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           E  ++ HSE+LA+AFGI        I+I KNLR+C DCH   K ISQI + EI+VRD +R
Sbjct: 569 EGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSR 628

Query: 806 FHHFKDGICSCGDYW 820
           FH FKDG CSC DYW
Sbjct: 629 FHSFKDGYCSCRDYW 643



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 239/511 (46%), Gaps = 57/511 (11%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA-NLGD-LSFSRHTFDHISYRNV 110
           L   C  L   K++HA ++  G     F + KL++  A +L D L ++   F +    +V
Sbjct: 11  LLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDV 70

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
           +  N++I       R  +++  F +    S   PD ++F  ++KA  NL     G ++HC
Sbjct: 71  FMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHC 130

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             L  G +  +FV  +L+ MY   G    ARK+FD+MP  ++ +WNAM++  C+ G+   
Sbjct: 131 QALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDMKG 190

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
             ++ D                ++PV                        NL   N ++ 
Sbjct: 191 GRELFD----------------LMPV-----------------------RNLMSWNVMLA 211

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
            Y K G +  A  +F +M  +D VSW+++I  +  +     A  FF  +Q+ G++P+  +
Sbjct: 212 GYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETS 271

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRG--WFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           L  + S  AQ       + +HGFI + G  W    V + NA++D Y+K G +  A  VFE
Sbjct: 272 LTGVLSACAQAGALEFGKILHGFIEKSGLAWI---VSVNNALLDTYSKCGNVLMAQLVFE 328

Query: 406 G-LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +  ++++SW +++   A +G   EAI +F  MEE   I P++  ++S+L A SH G +
Sbjct: 329 RIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESG-IRPDEIAFISLLYACSHAGLV 387

Query: 465 RQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
            QG +   + +K     +  +    C+VD+YG+ G++  A     Q+P   +++ W  ++
Sbjct: 388 EQGCEYFDK-MKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLL 446

Query: 522 SCHGIHGQGDKALNFFRQM--LDEGVRPDHI 550
               +HG    A     ++  LD     DH+
Sbjct: 447 GACSMHGDVKLAEQVKERLSELDPNNSSDHV 477



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 213/473 (45%), Gaps = 73/473 (15%)

Query: 10  DRRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK---RL 66
           DR    LL  ++  R  FS         PD          F  + ++   L  V+   +L
Sbjct: 84  DRPQDSLLKFIEMRRNSFSP--------PD-------SFSFAFIVKAAANLRSVRVGIQL 128

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           H   +V G    +F  T L++ Y   G + F+R  FD +   N   WN+M++   R G +
Sbjct: 129 HCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDM 188

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH 186
                         G R  F   P      RNL+               W+V +A     
Sbjct: 189 K-------------GGRELFDLMP-----VRNLMS--------------WNVMLAG---- 212

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
            Y + G   +AR++F +MP++D  SW+ MI G+  +G   EA     E++ +G+  +  +
Sbjct: 213 -YTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETS 271

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +  +L  CA++  +  G ++H +I K GL + + V+N L++ Y+K G +  A  VF+++M
Sbjct: 272 LTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIM 331

Query: 307 -ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            ER++VSW S++AA         A G F  M+++GI+PD +  +SL      L  C ++ 
Sbjct: 332 NERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISL------LYACSHAG 385

Query: 366 SVHG----FIMRRGWFMEDVIIGN--AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 418
            V      F   +G +  +  I +   +VD+Y + G +  A      +P+    I W TL
Sbjct: 386 LVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTL 445

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGT-YVSILPAYSHVGALRQGIKI 470
           +   + +G    A    Q+ E  +E++PN  + +V +  AY+  G  +    +
Sbjct: 446 LGACSMHGDVKLAE---QVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASV 495


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/534 (41%), Positives = 330/534 (61%), Gaps = 57/534 (10%)

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++PD+++LV++    A +    + ++VHG  +R G F ED+ +GNA+VDMYAK G+++ A
Sbjct: 9   MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSF-EDLFVGNALVDMYAKCGMVDEA 67

Query: 401 CAVFEGLPVKDVISWNTLITGY-----------------------------------AQN 425
             VF+ +  KDV+SWN ++ GY                                   AQ 
Sbjct: 68  SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127

Query: 426 GLASEAIEVFQMME--ECNE--------------INPNQGTYVSILPAYSHVGALRQGIK 469
           GL  E ++VF+ M+  E N+              + PN  T    L A + + ALR G +
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187

Query: 470 IHARVIKNCLCFD---VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           IHA +++N   FD   ++VA CL+DMY K G ID A  +F  + + + V W ++++ +G+
Sbjct: 188 IHAYILRNH--FDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGM 245

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG+G +AL  F +M   G++PD +T + +L ACSHSG++ +G  +F+ M +EFG+ P  +
Sbjct: 246 HGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQE 305

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HY CMVDL GRAG L  A   I+ M + P + +W ALL  CRIH N+ELG  A+ +L E+
Sbjct: 306 HYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLEL 365

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           +SEN G Y L+SNIYAN  +W+ V  VRSL ++ G++K PG S ++       FY  ++T
Sbjct: 366 NSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKT 425

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP+ ++IY+ LR+LT ++K LGYVP+ SF L DV+++EK  +L  HSE+LA+A+GI+ S 
Sbjct: 426 HPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISA 485

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P +PI+I KNLRVCGDCHN   +IS I + EII+RDS+RFHHFK G CSC  YW
Sbjct: 486 PGAPIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 79/386 (20%)

Query: 142 LRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
           +RPD  +   VL AC ++   + GK +H   ++ G   D+FV  +L+ MY + G+ + A 
Sbjct: 9   MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI------------- 245
           K+FD +  +D  SWNAM++GY Q G   +AL + ++MR E + ++ +             
Sbjct: 69  KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128

Query: 246 ---------------------------------------TVASILPVCARSDNILSGLLI 266
                                                  T++  L  CAR   +  G  I
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188

Query: 267 HLYIVKHGLEFN-LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           H YI+++  +   L+V+N LI+MYAK G +  A  VFD + +++ VSW S++  Y     
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248

Query: 326 PITAHGFFTTMQQAGIQPDLLTLV------SLTSIVAQLNDCRNSRSVH-GFIMRRGWFM 378
              A   F  M++ G+QPD +TL+      S + ++ Q  +  NS S   G I  +  + 
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEV 434
                   +VD+  + G +N A  + EG+ ++   I W  L++G   +A   L   A + 
Sbjct: 309 -------CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAK- 360

Query: 435 FQMMEECNEINPNQGTYVSILPAYSH 460
            Q++E  +E   N G+Y  +   Y++
Sbjct: 361 -QLLELNSE---NDGSYTLLSNIYAN 382



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 140/318 (44%), Gaps = 63/318 (19%)

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
           H K +H + V SG  + +F    LV+ YA  G +  +   FD I  ++V +WN+M++ Y 
Sbjct: 31  HGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYS 90

Query: 122 RCGRLSEAVDCF------------------------------------------------ 133
           + GR  +A+  F                                                
Sbjct: 91  QIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDALE 150

Query: 134 ---YQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD-VFVAASLLH 186
              + F     ++P+ +T    L AC  L     G++IH  +L+  F+   ++VA  L+ 
Sbjct: 151 LFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLID 210

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY + G  +VAR +FD++  ++  SW ++++GY   G   EAL++ DEMR  G+  D +T
Sbjct: 211 MYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVT 270

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN----LINMYAKFGMMRHALRVF 302
           +  +L  C+ S  I  G+     + K   EF +         ++++  + G +  A+ + 
Sbjct: 271 LLVVLYACSHSGMIDQGIEFFNSMSK---EFGVIPGQEHYACMVDLLGRAGRLNEAMELI 327

Query: 303 DQM-MERDVVSWNSIIAA 319
           + M ME   + W ++++ 
Sbjct: 328 EGMQMEPSSIVWVALLSG 345



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 75/134 (55%)

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           ++ P+  + V++LPA + +GA   G  +H   +++    D+FV   LVDMY KCG +D+A
Sbjct: 8   DMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEA 67

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F ++     V WNA+++ +   G+ + AL  F +M +E +  + +++ +++ A +  
Sbjct: 68  SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127

Query: 563 GLVSEGQRYFHMMQ 576
           GL  E    F  MQ
Sbjct: 128 GLGCETLDVFREMQ 141


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/647 (37%), Positives = 376/647 (58%), Gaps = 7/647 (1%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F +       KRLHAL++  G   +    +KL   YA     S++ H FD +S   +++W
Sbjct: 21  FSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSW 80

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VD-GKKIHCSVL 170
           N+M+ +YV+ GR  +A++ F +   +    PD +T+P V+KAC +L  +D G  IH    
Sbjct: 81  NAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTF 140

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
           K G++ D FV  +LL MY   G    A+ +FD M  R   SWN MI+GY ++  A +A++
Sbjct: 141 KFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVN 200

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           +   M   GV  D  TV S+LP C    N+  G  +H  + + G   N+ V N L++MY 
Sbjct: 201 VYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYV 260

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G M+ A  +   M ++DVV+W ++I  Y  + D  +A      MQ  G++P+ +++ S
Sbjct: 261 KCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIAS 320

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           L S    L    + + +H + +R+     +VI+  A+++MYAK    N +  VF G   K
Sbjct: 321 LLSACGSLVYLNHGKCLHAWAIRQK-IESEVIVETALINMYAKCNCGNLSYKVFMGTSKK 379

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
               WN L++G+ QN LA EAIE+F+ M    ++ P+  T+ S+LPAY+ +  L+Q + I
Sbjct: 380 RTAPWNALLSGFIQNRLAREAIELFKQML-VKDVQPDHATFNSLLPAYAILADLQQAMNI 438

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPWNAIISCHGIHG 528
           H  +I++   + + VA+ LVD+Y KCG +  A  +F    +     + W+AII+ +G HG
Sbjct: 439 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHG 498

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G  A+  F QM+  GV+P+H+TF S+L ACSH+GLV+EG   F+ M ++  I  H+ HY
Sbjct: 499 HGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHY 558

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CM+DL GRAG L  A+N I+ MP+ P+ ++WGALLGAC IH N+ELG VA+   F+++ 
Sbjct: 559 TCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEP 618

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           EN G YVL++ +YA VG+W   + VR +  + GL+K P  S IEV +
Sbjct: 619 ENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEVRD 665


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/689 (36%), Positives = 401/689 (58%), Gaps = 10/689 (1%)

Query: 50  FDDLFQSCTKLHHVKRLHAL---LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C  L + K +  L   +   G     F ++ L+  Y   G +  +   FD + 
Sbjct: 137 FPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVL 196

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GK 163
            ++   WN M++ Y +CG  S++V   +       + P+  TF  VL  C +  L+D G 
Sbjct: 197 QKDCVIWNVMLNGYAKCGA-SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGV 255

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+  G +++  +  SLL MY + G  + A KLF  M   D+ +WN MISGY QSG
Sbjct: 256 QLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSG 315

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              E+L    EM   GV  D IT +S+LP  ++ +N+     IH YI++H +  ++F+++
Sbjct: 316 LMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTS 375

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            LI+ Y K   +  A ++F Q    DVV + ++I+ Y  +   I A   F  + +  I P
Sbjct: 376 ALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISP 435

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           + +TLVS+  ++  L   +  R +HGFI+++G F     IG AV+DMYAK G +N A  +
Sbjct: 436 NEITLVSILPVIGGLLALKLGRELHGFIIKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEI 494

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F  L  +D++SWN++IT  AQ+   S AI++F+ M   + I  +  +  + L A +++ +
Sbjct: 495 FGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG-VSGICFDCVSISAALSACANLPS 553

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
              G  IH  +IK+ L  DV+  + L+DMY KCG +  AM++F  +   + V WN+II+ 
Sbjct: 554 ESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAA 613

Query: 524 HGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
           +G HG+   +L  F +M+++ G RPD ITF+ +++ C H G V EG R+F  M +++GI+
Sbjct: 614 YGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQ 673

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P  +HY C+VDLFGRAG L  A+  +++MP  PDA +WG LLGA R+H N+EL  VAS R
Sbjct: 674 PQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSR 733

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L ++D  N GYYVL+SN +AN G+WE V +VRSL ++R ++K PG+S IE+N    +F +
Sbjct: 734 LMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVS 793

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           G+  HP+   IY  L +L  +++  GY+P
Sbjct: 794 GDVNHPESSHIYSLLNSLLEELRLEGYIP 822



 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 201/693 (29%), Positives = 351/693 (50%), Gaps = 35/693 (5%)

Query: 53  LFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR- 108
           L Q C   T L   K++HA ++V+      ++  +++  YA  G  S     F  +  R 
Sbjct: 37  LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96

Query: 109 -NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHC 167
            ++  WNS+IS +VR G L++A+  FY   L  G+ PD  TFP ++KAC  L + K I  
Sbjct: 97  SSIRPWNSIISSFVRMGLLNQAL-AFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEF 155

Query: 168 ---SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
              +V  LG + + FVA+SL+  Y  +G  +VA KLFD +  +D   WN M++GY + G 
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGA 215

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           +   +     MR++ +S + +T   +L VCA    I  G+ +H  +V  GL+F   + N+
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNS 275

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L++MY+K G    A+++F  M   D V+WN +I+ Y QS     +  FF  M  +G+ PD
Sbjct: 276 LLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPD 335

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +T  SL   V++  +    R +H +IMR    + D+ + +A++D Y K   ++ A  +F
Sbjct: 336 AITFSSLLPSVSKFENLEYCRQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQKIF 394

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
                 DV+ +  +I+GY  NGL  +A+E+F+ + +  +I+PN+ T VSILP    + AL
Sbjct: 395 SQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKV-KISPNEITLVSILPVIGGLLAL 453

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
           + G ++H  +IK        +   ++DMY KCGR++ A  +F ++ +   V WN++I+  
Sbjct: 454 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRC 513

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
                   A++ FRQM   G+  D ++  + L+AC++    S G +  H    +  +   
Sbjct: 514 AQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFG-KAIHGFMIKHSLALD 572

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           +     ++D++ + G+L  A N    M  +   S W +++ A   HG ++        + 
Sbjct: 573 VYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVS-WNSIIAAYGNHGKLKDSLCLFHEMV 631

Query: 645 EVDS---ENVGYYVLMSNIYANVGKW-EGVDEVRSLARDRGLK-KTPGWSSIEVNNKVDI 699
           E      + + +  ++S +  +VG   EGV   RS+ +D G++ +   ++ +     VD+
Sbjct: 632 EKSGNRPDQITFLEIIS-LCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACV-----VDL 685

Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           F    R    YE +           KS+ + PD
Sbjct: 686 FGRAGRLSEAYETV-----------KSMPFPPD 707


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/625 (39%), Positives = 347/625 (55%), Gaps = 81/625 (12%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A +LFD++P  D+ S+N M+S Y ++ N  +A    D M        P   A+       
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM--------PFKDAASW----- 158

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
                                     N +I  YA+ G M  A  +F  MME++ VSWN++
Sbjct: 159 --------------------------NTMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+ Y +  D   A  FF      G                                    
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRG------------------------------------ 216

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVF 435
               V+   A++  Y K   +  A A+F+ + V K++++WN +I+GY +N    + +++F
Sbjct: 217 ----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           + M E   I PN     S L   S + AL+ G +IH  V K+ LC DV   T L+ MY K
Sbjct: 273 RAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CG + DA  LF  + +   V WNA+IS +  HG  DKAL  FR+M+D  +RPD ITFV++
Sbjct: 332 CGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           L AC+H+GLV+ G  YF  M  ++ ++P   HY CMVDL GRAG L  A   I++MP RP
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRP 451

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
            A+++G LLGACR+H N+EL   A+++L +++S+N   YV ++NIYA+  +WE V  VR 
Sbjct: 452 HAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRK 511

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
             ++  + K PG+S IE+ NKV  F + +R HP+ + I+ +L+ L  KMK  GY P+  F
Sbjct: 512 RMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEF 571

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
            L +VEE++KE +L  HSE+LA+AFG I  P  S IQ+FKNLR+CGDCH   KFIS+I +
Sbjct: 572 ALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEK 631

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           REIIVRD+ RFHHFKDG CSCGDYW
Sbjct: 632 REIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 205/438 (46%), Gaps = 56/438 (12%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS-MISVYVRCGRLSEAVDCFYQFT 137
           +F   K++      GD+  +   F  +  +N  TWNS +I +     R+ EA   F +  
Sbjct: 61  IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120

Query: 138 LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
                 PD +++  +L      V+ +K      ++ F+ D     +++  Y R G    A
Sbjct: 121 -----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-DAASWNTMITGYARRGEMEKA 174

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R+LF  M  ++  SWNAMISGY + G+  +A                  VA +  V A +
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF-------------KVAPVRGVVAWT 221

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF-DQMMERDVVSWNSI 316
                                      +I  Y K   +  A  +F D  + +++V+WN++
Sbjct: 222 --------------------------AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+ Y +++ P      F  M + GI+P+   L S     ++L+  +  R +H  I+ +  
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKST 314

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
              DV    +++ MY K G +  A  +FE +  KDV++WN +I+GYAQ+G A +A+ +F+
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDM 492
            M + N+I P+  T+V++L A +H G +  G+     ++++   + V       TC+VD+
Sbjct: 375 EMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD---YKVEPQPDHYTCMVDL 430

Query: 493 YGKCGRIDDAMSLFYQVP 510
            G+ G++++A+ L   +P
Sbjct: 431 LGRAGKLEEALKLIRSMP 448



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 38/276 (13%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   S   ++  YA  G++  +R  F  +  +N  +WN+MIS Y+ CG L +A       
Sbjct: 153 KDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKA------- 205

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
                    F+   PV    R +V               W   +       Y +     +
Sbjct: 206 -------SHFFKVAPV----RGVV--------------AWTAMITG-----YMKAKKVEL 235

Query: 197 ARKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           A  +F DM V ++  +WNAMISGY ++    + L +   M  EG+  +   ++S L  C+
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  IH  + K  L  ++    +LI+MY K G +  A ++F+ M ++DVV+WN+
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           +I+ Y Q  +   A   F  M    I+PD +T V++
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 6/235 (2%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-RNVYTWNSMISVYVRCGRLSEAVDCFY 134
           ++ V + T ++  Y     +  +   F  ++  +N+ TWN+MIS YV   R  + +  F 
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF- 272

Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           +  L  G+RP+       L  C  L     G++IH  V K     DV    SL+ MYC+ 
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    A KLF+ M  +D  +WNAMISGY Q GNA +AL +  EM    +  D IT  ++L
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392

Query: 252 PVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
             C  +  +  G+     +V+ + +E        ++++  + G +  AL++   M
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 65/309 (21%)

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N ++    + G I+ A  VF G+  K+ I+WN+L+ G +++   S  +E  Q+ +E  E 
Sbjct: 65  NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAHQLFDEIPE- 121

Query: 445 NPNQGTYVSILPAYSH--------------------------VGALRQGIKIHARVI--- 475
            P+  +Y  +L  Y                             G  R+G    AR +   
Sbjct: 122 -PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180

Query: 476 ---KNCLCFDVFVA--------------------------TCLVDMYGKCGRIDDAMSLF 506
              KN + ++  ++                          T ++  Y K  +++ A ++F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240

Query: 507 YQVPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
             +  + + V WNA+IS +  + + +  L  FR ML+EG+RP+     S L  CS    +
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
             G R  H +  +  +   +     ++ ++ + G LG A    + M  + D   W A++ 
Sbjct: 301 QLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMIS 358

Query: 626 ACRIHGNME 634
               HGN +
Sbjct: 359 GYAQHGNAD 367



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 21/187 (11%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H ++  S     V + T L++ Y   G+L  +   F+ +  ++V  WN+MIS Y + 
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------D 177
           G   +A+ C ++  + + +RPD+ TF  VL AC         H  ++ +G  +      D
Sbjct: 364 GNADKAL-CLFREMIDNKIRPDWITFVAVLLACN--------HAGLVNIGMAYFESMVRD 414

Query: 178 VFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
             V     H  C      R G    A KL   MP R   +    + G C+    VE  + 
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474

Query: 232 LDEMRLE 238
             E  L+
Sbjct: 475 AAEKLLQ 481


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 362/613 (59%), Gaps = 27/613 (4%)

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           L +M L G +M      +IL  C        G  +H +++K     ++F+   LI +Y K
Sbjct: 231 LLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 290

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF---TTMQQAGI------- 341
              +  A  VFD+M ER+VVSW ++I+AY Q      A   F     +   G+       
Sbjct: 291 CDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLK 350

Query: 342 -----QPDLLTLVSLTSIVAQLNDCRNS------RSVHGFIMRRGWFMED-VIIGNAVVD 389
                +P + T  +  +    L  C +S      R +H  I++  +  ED V +G++++D
Sbjct: 351 LSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNY--EDHVFVGSSLLD 408

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYAK G I+ A  VFE LP +DV+S   +I+GYAQ GL  EA+E+F+ ++    +  N  
Sbjct: 409 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQG-EGMKSNYV 467

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           TY  +L A S + AL  G ++H  V+++ +   V +   L+DMY KCG +  +  +F  +
Sbjct: 468 TYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 527

Query: 510 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEG 568
              + + WNA++  +  HG+G + L  F  M +E  V+PD +T +++L+ CSH GL  +G
Sbjct: 528 YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 587

Query: 569 QRYFHMMQE-EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
              F+ M   +  ++P ++HYGC+VDL GR+G +  A  FI+ MP  P A+IWG+LLGAC
Sbjct: 588 LNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 647

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           R+H N+++G  A  +L E++  N G YV++SN+YA+ G+WE V  +R L   + + K PG
Sbjct: 648 RVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPG 707

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
            SSIE++  +  F+  +R+HP+ E+I  +++ L+   K +GYVPD S VL DV+E++KE 
Sbjct: 708 RSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEK 767

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
           IL  HSE+LA++FG+I+SP   PI++ KNLR+C DCHN+ K+IS++  RE+ +RD NRFH
Sbjct: 768 ILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFH 827

Query: 808 HFKDGICSCGDYW 820
               G CSC DYW
Sbjct: 828 RIVGGKCSCEDYW 840



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 217/429 (50%), Gaps = 28/429 (6%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G    F  +  +L  C   R   +G+++H  ++K  +   VF+   L+ +Y +      A
Sbjct: 238 GFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDA 297

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI--------------LDEMRLEG---- 239
             +FD+MP R+  SW AMIS Y Q G A +AL++              +D+++L      
Sbjct: 298 HNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRP 357

Query: 240 -VSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            V  +P   T A++L  C  S   + G  IH  I+K   E ++FV ++L++MYAK G + 
Sbjct: 358 WVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIH 417

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  VF+ + ERDVVS  +II+ Y Q      A   F  +Q  G++ + +T   + + ++
Sbjct: 418 EARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 477

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
            L      + VH  ++ R      V++ N+++DMY+K G +  +  +F+ +  + VISWN
Sbjct: 478 GLAALDLGKQVHNHVL-RSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWN 536

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
            ++ GY+++G   E +++F +M E  ++ P+  T +++L   SH G   +G+ I   +  
Sbjct: 537 AMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSS 596

Query: 477 NCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
             +  +  +    C+VD+ G+ GR+++A     ++P   ++  W +++    +H   D  
Sbjct: 597 GKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIG 656

Query: 534 LNFFRQMLD 542
               +Q+L+
Sbjct: 657 EFAGQQLLE 665



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 217/438 (49%), Gaps = 54/438 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +R+HA ++ +  + +VF  T+L+  Y     L  + + FD +  RNV +W +MIS Y + 
Sbjct: 263 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQR 322

Query: 124 GRLSEAVDCFY--------------QFTLTSGLRP------DFYTFPPVLKACRN---LV 160
           G  S+A++ F+              +  L++  RP      + +TF  VL +C +    +
Sbjct: 323 GYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFI 382

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++IH  ++KL +E  VFV +SLL MY + G  + AR +F+ +P RD  S  A+ISGY 
Sbjct: 383 LGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYA 442

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q G   EAL++   ++ EG+  + +T   +L   +    +  G  +H ++++  +   + 
Sbjct: 443 QLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVV 502

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQA 339
           + N+LI+MY+K G + ++ R+FD M ER V+SWN+++  Y +  +       FT M ++ 
Sbjct: 503 LQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREET 562

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGN-----------AV 387
            ++PD +T      I+A L+ C      HG +  +G     D+  G             V
Sbjct: 563 KVKPDSVT------ILAVLSGCS-----HGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCV 611

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQMM-EECNEIN 445
           VD+  + G +  A    + +P +   + W +L+     +      +++ +   ++  EI 
Sbjct: 612 VDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHS----NVDIGEFAGQQLLEIE 667

Query: 446 P-NQGTYVSILPAYSHVG 462
           P N G YV +   Y+  G
Sbjct: 668 PGNAGNYVILSNLYASAG 685


>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
          Length = 978

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/563 (40%), Positives = 341/563 (60%), Gaps = 12/563 (2%)

Query: 267 HLYIVKHGLEFNLFVSNNLINMYAKF--GMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           HL+  + G   N  +S  L+N  A    G + +A  VF ++      +WNS+I  + QS 
Sbjct: 419 HLWKQRFG-PHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSP 477

Query: 325 DPITAHG--FFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
            P+      F+  M  A   +PD  T   L     +  +    R VHGFI+R G + +DV
Sbjct: 478 SPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFG-YDQDV 536

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++   ++  YA  G+I +A  VFE +P +D++SWN++I+ Y Q GL  EA++++  M   
Sbjct: 537 VLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRIS 596

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           N +  +  T VS+L + +HVGAL  G+++H    +  L  ++FV   L+DMY KCG +  
Sbjct: 597 N-VGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLAS 655

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A+S+F  +P+     WN++I  +G+HG+GD+A+ FF  ML  GVRP+ ITF+ LL  CSH
Sbjct: 656 ALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSH 715

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            GLV EG +YFHMM  EF +KP +KHYGCMVDLFGRAG L  A   I++ P + D  +W 
Sbjct: 716 QGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWR 775

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
            LLG+C+IH N+E+G +A   L ++ S   G  VL+S IYA     +GV  +R L + RG
Sbjct: 776 TLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRG 835

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           +K TPGWS IEV ++V  F   +++HP   +IY +L  +  +   +GY  ++S ++   E
Sbjct: 836 IKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLVAAPE 895

Query: 742 EDEKEHILTS----HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            + +E+   +    HSE+LAIA+G+  +P  + + I KNLRVC DCHN+TKF+S+  +RE
Sbjct: 896 SNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSKAFDRE 955

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           IIVRD  RFHHF+ G CSC ++W
Sbjct: 956 IIVRDRVRFHHFRGGHCSCKEFW 978



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 178/348 (51%), Gaps = 12/348 (3%)

Query: 82  STKLVNFYANL--GDLSFSRHTFDHISYRNVYTWNSMISVYVRC-GRLSEAVDCFYQFTL 138
           S KL+NF A    G L++++  F  I       WNSMI  + +    L      FY   L
Sbjct: 433 SEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHML 492

Query: 139 T-SGLRPDFYTFPPVLKACRNLVDGKK---IHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           + S  RPD YTF  +LKAC    +  K   +H  +++ G++ DV +  +L+  Y   GL 
Sbjct: 493 SASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLI 552

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             A K+F++MP RD  SWN+MIS YCQ+G   EAL + D+MR+  V  D  T+ S+L  C
Sbjct: 553 ETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSC 612

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           A    +  G+ +H +  +  L  N+FV N LI+MYAK G +  AL +F+ M +RDV +WN
Sbjct: 613 AHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWN 672

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           S+I  Y        A  FF +M  AG++P+ +T + L    +     +    V  F M  
Sbjct: 673 SMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKE--GVQYFHMMS 730

Query: 375 GWFMEDVIIGN--AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
             F     I +   +VD++ + G +  A  V    P + D + W TL+
Sbjct: 731 SEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLL 778



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 12/335 (3%)

Query: 50  FDDLFQSCTKLHH---VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C +       + +H  ++  G  + V   T L+  YA  G +  +   F+ + 
Sbjct: 504 FSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMP 563

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            R++ +WNSMIS Y + G   EA+  + Q  + S +  D +T   +L +C +   L  G 
Sbjct: 564 ARDLVSWNSMISCYCQTGLHEEALKMYDQMRI-SNVGFDGFTLVSLLSSCAHVGALHMGV 622

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H    +     ++FV  +L+ MY + G    A  +F+ MP RD  +WN+MI GY   G
Sbjct: 623 QMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHG 682

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVS 282
              EA+     M + GV  + IT   +L  C+    +  G+   H+   +  L+  +   
Sbjct: 683 RGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHY 742

Query: 283 NNLINMYAKFGMMRHALRVF-DQMMERDVVSWNSIIAAYE-QSNDPITAHGFFTTMQQAG 340
             +++++ + G ++ AL V      + D V W +++ + +   N  I        +Q   
Sbjct: 743 GCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGS 802

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +      L  L+ I A+  D +    +   I  RG
Sbjct: 803 LGAGDCVL--LSGIYAEAKDLQGVARMRKLIQSRG 835


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 267/770 (34%), Positives = 413/770 (53%), Gaps = 14/770 (1%)

Query: 55  QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           Q+   L   +++H+ +  +G    V  ST L+N Y   G L  +R  F+ +  RNV +W 
Sbjct: 163 QTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWT 222

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLK 171
           +MIS YV+ G   EA    +Q  + SG +P+  +F  +L AC N   L  G K+H  + +
Sbjct: 223 AMISGYVQHGDSKEAF-VLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQ 281

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
            G E +V V  +L+ MY R G    AR++FD++   +  SWNAMI+GY + G   EA  +
Sbjct: 282 AGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRL 340

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +M+ +G   D  T AS+L +CA   ++  G  +H  IV+   E ++ V+  LI+MYAK
Sbjct: 341 FRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAK 400

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A +VF+QM E++ VSWN+ IA   +      A   F  M++  + PD +T ++L
Sbjct: 401 CGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITL 460

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            +      D    R +HG I + G  + + ++ NA++ MY + G +  A  VF  +  +D
Sbjct: 461 LNSCTSPEDFERGRYIHGKIDQWG-MLSNNLVANALISMYGRCGKLADAREVFYRIRRRD 519

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           + SWN +I  Y Q+G    A ++F +  +      ++ T++++L A +++  L  G KIH
Sbjct: 520 LGSWNAMIAAYVQHGANGSAFDLF-IKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIH 578

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
             V K  L  D+ + T L+ MY KCG + DA S+F  V     V WNA+++ +     G 
Sbjct: 579 GLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQ 638

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
            AL  F+QM  EGV PD  T+ S+L AC+  G +  G++ FH   +E  ++   +HY CM
Sbjct: 639 DALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK-FHTQLKEAAMETDTRHYACM 697

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           V   GRA  L  A  FI+ +    DA +W +LL ACRIH N+ L   A + L +V +++ 
Sbjct: 698 VAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSS 757

Query: 652 -GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
                 + NIYA  G+WE V  +++  R+ GL   P   +IEVN++   F T N   P+ 
Sbjct: 758 PAVCEQLMNIYAAAGRWEDVSVIKATMREAGL-LAPKSCTIEVNSEFHTFMT-NHFSPQI 815

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
             + D++  L  KM   G++ D  +   D    EKE + +   E LA+A+G+  +PP   
Sbjct: 816 -GVEDKIEELVWKMMDKGFLLDPHYAPNDSR--EKERLFSHCPELLAVAYGLEHTPPGVL 872

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++   +  V    H   KFIS+   R I VRD N FH+FKDGICSCGDYW
Sbjct: 873 VRCVTDSPVTDPSHRMLKFISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 199/623 (31%), Positives = 334/623 (53%), Gaps = 15/623 (2%)

Query: 54  FQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
            Q C +   L   K++H  +  +     ++ +  L++ Y+  G +  + + F  +  ++V
Sbjct: 58  LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHC 167
            +WN+MIS Y   GR  EAVD FYQ     GL+P+  +F  +L AC+    L  G++IH 
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQ-REGLKPNQNSFISILSACQTPIVLEFGEQIHS 176

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            + K G+E DV V+ +L++MYC+ G   +ARK+F++M  R+  SW AMISGY Q G++ E
Sbjct: 177 HITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKE 236

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A  +  ++   G   + ++ ASIL  C   +++  GL +H YI + GLE  + V N LI+
Sbjct: 237 AFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALIS 296

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYA+ G + +A +VFD +   + VSWN++IA Y +      A   F  MQQ G QPD  T
Sbjct: 297 MYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFME-EAFRLFRDMQQKGFQPDRFT 355

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             SL +I A   D    + +H  I+R  W   DV +  A++ MYAK G +  A  VF  +
Sbjct: 356 YASLLAICADRADLNRGKELHSQIVRTAW-EADVTVATALISMYAKCGSLEEARKVFNQM 414

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P K+ +SWN  I    ++G   EA +VF+ M   +++ P+  T++++L + +      +G
Sbjct: 415 PEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRR-DDVIPDHVTFITLLNSCTSPEDFERG 473

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             IH ++ +  +  +  VA  L+ MYG+CG++ DA  +FY++ R     WNA+I+ +  H
Sbjct: 474 RYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQH 533

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G    A + F +   EG + D  TF+++L A ++   +  G R  H + E+ G++  ++ 
Sbjct: 534 GANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAG-RKIHGLVEKAGLEKDIRI 592

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR--IHGNMELGAVASDRLFE 645
              ++ ++ + G L  A++  +N+  + D   W A+L A     HG   L      RL  
Sbjct: 593 LTTLIKMYSKCGSLRDAYSVFKNVQEK-DVVCWNAMLAAYNHSDHGQDALKLFQQMRLEG 651

Query: 646 VDSENVGYYVLMSNIYANVGKWE 668
           V+ ++  Y  ++ N  A +G  E
Sbjct: 652 VNPDSATYTSVL-NACARLGAIE 673



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/557 (31%), Positives = 289/557 (51%), Gaps = 15/557 (2%)

Query: 135 QFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
           Q     G++ +   +   L+ C   ++L +GKK+H  +    FE D+++   L+ MY + 
Sbjct: 40  QLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKC 99

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G    A  +F  M  +D  SWNAMISGY   G   EA+D+  +M+ EG+  +  +  SIL
Sbjct: 100 GSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISIL 159

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             C     +  G  IH +I K G E ++ VS  LINMY K G +  A +VF++M ER+VV
Sbjct: 160 SACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVV 219

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
           SW ++I+ Y Q  D   A   F  + ++G QP+ ++  S+       ND      +H +I
Sbjct: 220 SWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYI 279

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
            + G   ++V++GNA++ MYA+ G + +A  VF+ L   + +SWN +I GY + G   EA
Sbjct: 280 KQAG-LEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEA 337

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
             +F+ M++     P++ TY S+L   +    L +G ++H+++++     DV VAT L+ 
Sbjct: 338 FRLFRDMQQ-KGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALIS 396

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KCG +++A  +F Q+P  ++V WNA I+C   HG   +A   F+QM  + V PDH+T
Sbjct: 397 MYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVT 456

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F++LL +C+       G RY H   +++G+  +      ++ ++GR G L  A      +
Sbjct: 457 FITLLNSCTSPEDFERG-RYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRI 515

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE-NVGYYVLMSNIYANVGKWEGV 670
             R D   W A++ A   HG       A D   +  SE   G      N+   +   E +
Sbjct: 516 R-RRDLGSWNAMIAAYVQHG---ANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDL 571

Query: 671 D---EVRSLARDRGLKK 684
           D   ++  L    GL+K
Sbjct: 572 DAGRKIHGLVEKAGLEK 588


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/367 (56%), Positives = 265/367 (72%)

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           IL A + V AL QG ++HA +IK     DV V+  LVDMYGKCGRI+DA  +F ++    
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
              WNA+IS    HG G +A+  F QML  GV+P+ ITFV +L+ CSH+GLV EG+ YF 
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            M  + GI P  +HY CMVDLFGRAG L  A NFI  MPV P+AS+WG+LLGACR+HGN+
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           EL   A ++L E+  EN G YVL+SNIYA  G+W+   +VR + +DR +KK PG S IEV
Sbjct: 184 ELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEV 243

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            NKV  F  G+ +HP+ E+IY+ L  LT +MK+ GY+P+ +FVL DVEE++KE IL  HS
Sbjct: 244 QNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHS 303

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           E+LAIAFGIIS+PP + I++ KNLRVCGDCH  TKFIS+I  REI++RD++RFHHFKDG 
Sbjct: 304 EKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQ 363

Query: 814 CSCGDYW 820
           CSCGDYW
Sbjct: 364 CSCGDYW 370



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A +      + VH  I++ G F  DV + N +VDMY K G I  A  VF  L   DV SW
Sbjct: 9   ASVAALEQGKQVHADIIKIG-FELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASW 67

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N +I+G AQ+G   EA+ +F+ M +   + PNQ T+V +L   SH G + +G      + 
Sbjct: 68  NAMISGLAQHGCGKEAVLLFEQMLQTG-VKPNQITFVVVLSGCSHAGLVDEGRNYFDSMT 126

Query: 476 KN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
           ++  +       +C+VD++G+ G +D+A++   Q+P   ++  W +++    +HG  + A
Sbjct: 127 RDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELA 186

Query: 534 LNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQE 577
                Q+++  + P++  T+V L    + +G   +  +   MM++
Sbjct: 187 ERAVEQLIE--LTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKD 229



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 9/220 (4%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A IL  CA    +  G  +H  I+K G E ++ VSN L++MY K G +  A  VF +++
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           E DV SWN++I+   Q      A   F  M Q G++P+ +T V + S  +        R+
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQN 425
               + R           + +VD++ + G ++ A      +PV+   S W +L+     +
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 426 G---LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           G   LA  A+E  Q++E   E   N GTYV +   Y+  G
Sbjct: 181 GNIELAERAVE--QLIELTPE---NPGTYVLLSNIYAAAG 215



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 5/173 (2%)

Query: 152 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L+AC +   L  GK++H  ++K+GFE DV V+  L+ MY + G    A+++F  +   D
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
             SWNAMISG  Q G   EA+ + ++M   GV  + IT   +L  C+ +  +  G     
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 269 YIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
            + + HG+       + +++++ + G +  AL   +QM +E +   W S++ A
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGA 176



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 10/212 (4%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L   K++HA ++  G    V  S  LV+ Y   G +  ++  F  +   +V +WN+
Sbjct: 10  SVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNA 69

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLK- 171
           MIS   + G   EAV  F Q  L +G++P+  TF  VL  C +  LVD G+    S+ + 
Sbjct: 70  MISGLAQHGCGKEAVLLFEQM-LQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRD 128

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNAVEALD 230
            G        + ++ ++ R G  + A    + MPV  + S W +++ G C+    +E  +
Sbjct: 129 HGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLL-GACRVHGNIELAE 187

Query: 231 ILDEMRLEGVSMDPIT---VASILPVCARSDN 259
              E  +E    +P T   +++I     R D+
Sbjct: 188 RAVEQLIELTPENPGTYVLLSNIYAAAGRWDD 219


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 385/687 (56%), Gaps = 10/687 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L ++C     + +LH+  +  G     F  TKL   YA    L  +   F+    + VY 
Sbjct: 10  LLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTL--TSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
           WN+++  Y   G+  E +  F+Q      +  RPD YT    LK+C  L     GK IH 
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIH- 128

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             LK   + D+FV ++L+ +Y + G  N A K+F + P  D   W ++I+GY Q+G+   
Sbjct: 129 GFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPEL 188

Query: 228 ALDILDEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           AL     M  LE VS DP+T+ S    CA+  +   G  +H ++ + G +  L ++N+++
Sbjct: 189 ALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSIL 248

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           N+Y K G +R A  +F +M  +D++SW+S++A Y  +     A   F  M    I+ + +
Sbjct: 249 NLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 308

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T++S     A  ++    + +H   +  G F  D+ +  A++DMY K     +A  +F  
Sbjct: 309 TVISALRACASSSNLEEGKQIHKLAVNYG-FELDITVSTALMDMYLKCFSPENAIELFNR 367

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +P KDV+SW  L +GYA+ G+A +++ VF  M   N   P+    V IL A S +G ++Q
Sbjct: 368 MPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLS-NGTRPDAIALVKILAASSELGIVQQ 426

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
            + +HA V K+    + F+   L+++Y KC  ID+A  +F  +  +  V W++II+ +G 
Sbjct: 427 ALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGF 486

Query: 527 HGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           HGQG++AL    QM +   V+P+ +TFVS+L+ACSH+GL+ EG + FH+M  E+ + P++
Sbjct: 487 HGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNI 546

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HYG MVDL GR G L  A + I NMP++    +WGALLGACRIH N+++G +A+  LF 
Sbjct: 547 EHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFL 606

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +D  + GYY L+SNIY     W    ++R+L ++  LKK  G S +E+ N+V  F   +R
Sbjct: 607 LDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDR 666

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPD 732
            H + ++IY+ LR L A+M+  GY PD
Sbjct: 667 FHGESDQIYEMLRKLDARMREEGYDPD 693


>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 353/599 (58%), Gaps = 13/599 (2%)

Query: 232 LDEMRLEGVSMDPITVA------SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           L ++  E    +P T A      SIL +  +  ++     I  Y +K   + N  V   L
Sbjct: 14  LTKLNTEAPRHEPNTAALEPPSSSILSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKL 72

Query: 286 INMYAK---FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           IN          M HA R+FD++ + D+V +N++   Y + +DP+ A    + +  +G+ 
Sbjct: 73  INFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLL 132

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD  T  SL    A+L      + +H   ++ G   +++ +   +++MY     +++A  
Sbjct: 133 PDDYTFSSLLKACARLKALEEGKQLHCLAVKLG-VGDNMYVCPTLINMYTACNDVDAARR 191

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           VF+ +    V+++N +IT  A+N   +EA+ +F+ ++E + + P   T +  L + + +G
Sbjct: 192 VFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQE-SGLKPTDVTMLVALSSCALLG 250

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G  IH  V KN     V V T L+DMY KCG +DDA+S+F  +PR  +  W+A+I 
Sbjct: 251 ALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIV 310

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G +A++  R+M    V+PD ITF+ +L ACSH+GLV EG  YFH M  E+GI 
Sbjct: 311 AYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIV 370

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P +KHYGCM+DL GRAG L  A  FI  +P++P   +W  LL +C  HGN+E+  +   R
Sbjct: 371 PSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQR 430

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           +FE+D  + G YV++SN+ A  G+W+ V+ +R +  D+G  K PG SSIEVNN V  F++
Sbjct: 431 IFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFS 490

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL-QDVEEDEKEHILTSHSERLAIAFG 761
           G+  H     ++  L  L  ++K  GYVPD S V   D+E++EKE +L  HSE+LAI +G
Sbjct: 491 GDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYG 550

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++++PP + I++ KNLRVC DCHN  KFIS I  R+II+RD  RFHHFKDG CSCGDYW
Sbjct: 551 LLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 195/408 (47%), Gaps = 13/408 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYAN---LGDLSFSRHTFDHISYR 108
           L   CT L  +K++ A  + + +   TV   TKL+NF  +   +  +  +   FD I   
Sbjct: 41  LIPKCTSLRELKQIQAYTIKTHQNNPTVL--TKLINFCTSNPTIASMDHAHRMFDKIPQP 98

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKI 165
           ++  +N+M   Y R      A+    Q  L SGL PD YTF  +LKAC   + L +GK++
Sbjct: 99  DIVLFNTMARGYARFDDPLRAILLCSQ-VLCSGLLPDDYTFSSLLKACARLKALEEGKQL 157

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           HC  +KLG   +++V  +L++MY      + AR++FD +      ++NA+I+   ++   
Sbjct: 158 HCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRP 217

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EAL +  E++  G+    +T+   L  CA    +  G  IH Y+ K+G +  + V+  L
Sbjct: 218 NEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTAL 277

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I+MYAK G +  A+ VF  M  RD  +W+++I AY        A      M++A +QPD 
Sbjct: 278 IDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDE 337

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T + +    +              +      +  +     ++D+  + G +  AC   +
Sbjct: 338 ITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFID 397

Query: 406 GLPVKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
            LP+K   I W TL++  + +G    A  V Q + E ++   + G YV
Sbjct: 398 ELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDD--SHGGDYV 443


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/576 (40%), Positives = 338/576 (58%), Gaps = 5/576 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A+IL  C  S  +  G  +H  ++  GL  +  ++  L+++YA  G++  A R+FD+M  
Sbjct: 67  ATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPN 126

Query: 308 R-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSR 365
           + +V  WN +I AY +      A   +  M   G ++PD  T   +    A L D    R
Sbjct: 127 QGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGR 186

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VH  +MR  W   DV +   ++DMYAK G ++ A AVF+   V+D + WN++I    QN
Sbjct: 187 EVHDRVMRTSW-AADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQN 245

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G  +EA+ + + M     I P   T VS + A +  GAL +G ++H    +        +
Sbjct: 246 GRPAEALALCRNMA-AEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKL 304

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG- 544
            T L+DMY K G +  A  LF Q+     + WNA+I   G+HG  D A   FR+M +E  
Sbjct: 305 KTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQ 364

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           V PDHITFV +L+AC+H G+V E +  F +M   + IKP ++HY C+VD+ G +G    A
Sbjct: 365 VMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEA 424

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
            + I+ M V+PD+ IWGALL  C+IH N+EL  +A  +L E++ E+ G YVL+SNIYA  
Sbjct: 425 SDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQS 484

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           GKWE    VR L  +RGLKK    S IE+  K   F  G+ +HP+ ++IY+EL  L   +
Sbjct: 485 GKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEGLI 544

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
              GYVPD + V  +VE+DEK +++  HSERLAIAFG+IS+PP + + + KNLRVC DCH
Sbjct: 545 SQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCH 604

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              K ISQI +REII+RD NR+HHF +G CSC D+W
Sbjct: 605 VVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 225/458 (49%), Gaps = 17/458 (3%)

Query: 49  DFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           ++  + +SC     V+   +LHA L+VSG       +T+LV+ YA+ G +S +R  FD +
Sbjct: 65  NYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEM 124

Query: 106 SYR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD--- 161
             + NV+ WN +I  Y R G    A++ + +      + PD +T+PPVLKAC  L+D   
Sbjct: 125 PNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGA 184

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+++H  V++  +  DVFV A L+ MY + G  + A  +FD   VRD+  WN+MI+   Q
Sbjct: 185 GREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQ 244

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   EAL +   M  EG++   +T+ S +   A +  +  G  +H Y  + G      +
Sbjct: 245 NGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKL 304

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAG 340
             +L++MYAK G +  A  +FDQ+  R+++SWN++I  +        A   F  M+ +A 
Sbjct: 305 KTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQ 364

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           + PD +T V + S        + ++ V   ++        V     +VD+    G    A
Sbjct: 365 VMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEA 424

Query: 401 CAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPA 457
             V +G+ VK D   W  L+ G   +    + +E+ ++ + +  E+ P + G YV +   
Sbjct: 425 SDVIKGMLVKPDSGIWGALLNGCKIH----KNVELAELALHKLIELEPEDAGNYVLLSNI 480

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           Y+  G   +  ++   +    L     +A   +++ GK
Sbjct: 481 YAQSGKWEEAARVRKLMTNRGL--KKIIACSWIELKGK 516



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 6/188 (3%)

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N   Y +IL +     A+R G ++HAR++ + L  D  +AT LVD+Y  CG +  A  LF
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 507 YQVPRSSSV-PWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGL 564
            ++P   +V  WN +I  +   G  + A+  +R+ML  G + PD+ T+  +L AC+    
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 565 VSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           +  G+  +  +M+  +     +     ++D++ + G +  A     +  VR DA +W ++
Sbjct: 182 LGAGREVHDRVMRTSWAADVFV--CAGLIDMYAKCGCVDEAWAVFDSTTVR-DAVVWNSM 238

Query: 624 LGACRIHG 631
           + AC  +G
Sbjct: 239 IAACGQNG 246


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/608 (36%), Positives = 356/608 (58%), Gaps = 14/608 (2%)

Query: 223 GNAVEALDILDEMRLEGVSMDPIT-------VASILPVCARSDNILSGLLIHLYIVKHGL 275
           G  +  L ++ E + E   ++ +        +  +L +CA++ + + G   H  I++ GL
Sbjct: 15  GIHIRKLTVISEAKPESSKVENVVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGL 74

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           E ++  SN LINMY+K  ++  A + F++M  + +VSWN++I A  Q+ +   A      
Sbjct: 75  EMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQ 134

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           MQ+ G   +  T+ S+    A          +H F ++      +  +G A++ +YAK  
Sbjct: 135 MQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAA-IDSNCFVGTALLHVYAKCS 193

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV--S 453
            I  A  +FE +P K+ ++W++++ GY QNG   EA+ +F+       +  +Q  ++  S
Sbjct: 194 SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFR---NAQLMGFDQDPFMISS 250

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
            + A + +  L +G ++HA   K+    +++V++ L+DMY KCG I +A  +F  V    
Sbjct: 251 AVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVR 310

Query: 514 S-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
           S V WNA+IS    H +  +A+  F +M   G  PD +T+V +L ACSH GL  EGQ+YF
Sbjct: 311 SIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYF 370

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            +M  +  + P + HY CM+D+ GRAG +  A++ I+ MP    +S+WG+LL +C+I+GN
Sbjct: 371 DLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGN 430

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           +E   +A+  LFE++  N G ++L++NIYA   KW+ V   R L R+  ++K  G S IE
Sbjct: 431 IEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIE 490

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
           + NK+  F  G R HP+ + IY +L NL  ++K L Y  D S  L DVEE+ K+ +L  H
Sbjct: 491 IKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHH 550

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SE+LAI FG++  P   PI+I KNLR+CGDCH + K +S+ T REIIVRD+NRFHHFKDG
Sbjct: 551 SEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDG 610

Query: 813 ICSCGDYW 820
            CSCG++W
Sbjct: 611 FCSCGEFW 618



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 208/375 (55%), Gaps = 5/375 (1%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R+ + G+  H  ++++G E D+  +  L++MY +  L + ARK F++MPV+   SWN +I
Sbjct: 57  RSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVI 116

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
               Q+    EAL +L +M+ EG   +  T++S+L  CA    IL  + +H + +K  ++
Sbjct: 117 GALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAID 176

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            N FV   L+++YAK   ++ A ++F+ M E++ V+W+S++A Y Q+     A   F   
Sbjct: 177 SNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNA 236

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           Q  G   D   + S  S  A L      + VH    + G F  ++ + ++++DMYAK G 
Sbjct: 237 QLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSG-FGSNIYVSSSLIDMYAKCGC 295

Query: 397 INSACAVFEG-LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
           I  A  VF+G L V+ ++ WN +I+G+A++  A EA+ +F+ M++     P+  TYV +L
Sbjct: 296 IREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQ-RGFFPDDVTYVCVL 354

Query: 456 PAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSS 513
            A SH+G   +G K    +++ + L   V   +C++D+ G+ G +  A  L  ++P  ++
Sbjct: 355 NACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNAT 414

Query: 514 SVPWNAIISCHGIHG 528
           S  W ++++   I+G
Sbjct: 415 SSMWGSLLASCKIYG 429



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 184/377 (48%), Gaps = 9/377 (2%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L Q C K       +  HA ++  G    + +S  L+N Y+    +  +R  F+ +  ++
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
           + +WN++I    +     EA+    Q     G   + +T   VL  C     +++  ++H
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQ-REGTPFNEFTISSVLCNCAFKCAILECMQLH 167

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K   + + FV  +LLH+Y +      A ++F+ MP +++ +W++M++GY Q+G   
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL I    +L G   DP  ++S +  CA    ++ G  +H    K G   N++VS++LI
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLI 287

Query: 287 NMYAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           +MYAK G +R A  VF  ++E R +V WN++I+ + +      A   F  MQQ G  PD 
Sbjct: 288 DMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDD 347

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           +T V + +  + +      +     ++R+      V+  + ++D+  + G+++ A  + E
Sbjct: 348 VTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIE 407

Query: 406 GLPVKDVIS-WNTLITG 421
            +P     S W +L+  
Sbjct: 408 RMPFNATSSMWGSLLAS 424


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 351/591 (59%), Gaps = 14/591 (2%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M   G S +  T    +  CA     ++G  +H ++ K G     FV  +LI+MY K  +
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 295 MRHALRVFDQ--MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           + +A ++FD+     +  V +NS+++ Y  ++        F  M++ G++ + +T++ L 
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
                  +      VHGF ++ G  M D  +GN ++ MY K G I+    +F+ +P K +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDM-DSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           I+WN +I GYAQNGLA+  +E+++ ME      P+  T V +L + +H+GAL  G ++  
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMES-KGFCPDPLTLVGVLSSCAHLGALSVGKEVER 238

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
           ++       + F+   LV+MY +CG +  A  +F  +P  S V W AII  +G+HGQG+ 
Sbjct: 239 KMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEV 298

Query: 533 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
           A+  F +M+  G++PD   FVS+L+ACSH+GL ++G  YF +M+ ++G++P  +HY CMV
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMV 358

Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 652
           DL GRAG L  A   I++M VR D ++WGALLGAC+IH N+EL  +A +++ E++  N G
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTG 418

Query: 653 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 712
           YYVL+SN+Y   G  EG+  VR L R R LKK PG S +E   +V +F+ G+R HP+  +
Sbjct: 419 YYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNE 478

Query: 713 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS---HSERLAIAFGIISSPPKS 769
           IY +L  L   +K L             + + +E  L S   HSE+LA+AF ++++  ++
Sbjct: 479 IYKKLNELENLVKDLDGCKKN-------DHERREEYLNSMGVHSEKLAVAFALLNTRKET 531

Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            I I KNLR+CGDCH + K +S+I +R+ +VRD+ RFHHFK+G CSC +YW
Sbjct: 532 EIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 236/468 (50%), Gaps = 15/468 (3%)

Query: 138 LTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           L SG  P+ +TFP  +K+C  L   + GK++HC V K G   + FV  SL+ MY +  L 
Sbjct: 2   LRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLI 61

Query: 195 NVARKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
           + ARKLFD+ P   + +  +N+++SGY  +    + + +  EMR  GV ++ +T+  ++ 
Sbjct: 62  DNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQ 121

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C    N+  G+ +H + VK GL+ +  V N L+ MY K G +    ++FD+M  + +++
Sbjct: 122 PCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLIT 181

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++I  Y Q+         +  M+  G  PD LTLV + S  A L      + V   + 
Sbjct: 182 WNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKME 241

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
             G F  +  + NA+V+MYA+ G +  A  +F+G+PVK V+SW  +I GY  +G    A+
Sbjct: 242 GFG-FSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVD 491
            +F  M     I P+   +VS+L A SH G   +G+     +  K  L       +C+VD
Sbjct: 301 GLFDEMIR-GGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVD 359

Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           + G+ GR+++A  L   +  R+    W A++    IH   + A   F Q+++  + P + 
Sbjct: 360 LLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIE--LEPTNT 417

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC-MVDLFGR 597
            +  LL+         EG     M+  +  +K   K  GC  V+  GR
Sbjct: 418 GYYVLLSNVYTEAGNLEGILRVRMLMRKRKLK---KDPGCSYVEFKGR 462



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 192/414 (46%), Gaps = 11/414 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRNVYTWNSMISVYV 121
           K+LH  +  +G +   F  T L++ Y     +  +R  FD    S +    +NS++S Y 
Sbjct: 30  KQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYA 89

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDV 178
              R+ + V  F +     G+  +  T   +++ C    NL  G  +H   +K G + D 
Sbjct: 90  LNSRVKDVVVLFCEMR-ELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDS 148

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
            V   LL MY + G  +  RKLFD+MP +   +WNAMI+GY Q+G A   L++  EM  +
Sbjct: 149 SVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESK 208

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           G   DP+T+  +L  CA    +  G  +   +   G   N F++N L+NMYA+ G ++ A
Sbjct: 209 GFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKA 268

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +FD M  + VVSW +II  Y        A G F  M + GI+PD    VS+ S  +  
Sbjct: 269 RDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHA 328

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
                     G + R+          + +VD+  + G +N A  + E + V+ D   W  
Sbjct: 329 GLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGA 388

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
           L+ G  +     E  E+    E+  E+ P N G YV +   Y+  G L   +++
Sbjct: 389 LL-GACKIHRNVELAEL--AFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRV 439


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/543 (40%), Positives = 325/543 (59%), Gaps = 2/543 (0%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           N+   N LI  Y K G +  A ++FD+M  R+V +WN+++A    S     + GFF  M+
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G+QPD   L SL    A L D  + R VH +++R G    D+ +G+++  MY + G +
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGFL 225

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
               A    LP  +++S NT I+G  QNG A  A+E F +M     +  N  T+VS + +
Sbjct: 226 RDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAG-VEANAVTFVSAVTS 284

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S + AL QG +IHA  IK  +   V V T LV MY +CG + D+  +  +   +  V  
Sbjct: 285 CSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLC 344

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +A+IS +G HG G KA+  F+QM+  G  P+ +TF++LL ACSHSGL  EG   F +M +
Sbjct: 345 SAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 404

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            +G++P +KHY C+VDL GR+G L  A + I +MPV+PD  IW  LL AC+     ++  
Sbjct: 405 TYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAE 464

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             ++R+ E+D  +   YVL+SNI A   +WE V +VR   R++ ++K PG S +E+  ++
Sbjct: 465 RIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQI 524

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F TG+ +H +  +I + L  +  +++  GY PD S V  D+E++EKE  L  HSE+LA
Sbjct: 525 HQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLA 584

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAF  +S P   PI++ KNLRVC DCH   K +S++  REI+VRD +RFHHFKDG CSCG
Sbjct: 585 IAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCG 644

Query: 818 DYW 820
           DYW
Sbjct: 645 DYW 647



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 188/371 (50%), Gaps = 13/371 (3%)

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
           W++ +       Y + G    ARKLFD+MP R+  +WNAM++G   SG   E+L     M
Sbjct: 111 WNILIGG-----YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 165

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           R EG+  D   + S+   CA   +++SG  +H Y+V+ GL+ ++ V ++L +MY + G +
Sbjct: 166 RREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFL 225

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           R        +   ++VS N+ I+   Q+ D   A  FF  M+ AG++ + +T VS  +  
Sbjct: 226 RDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSC 285

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           + L      + +H   ++ G  ++ V+ +  ++V MY++ G +  +  V       D++ 
Sbjct: 286 SDLAALAQGQQIHALAIKTG--VDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 343

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
            + +I+ Y  +G   +A+ +F QMM    E  PN+ T++++L A SH G   +G+     
Sbjct: 344 CSAMISAYGFHGHGQKAVGLFKQMMAAGAE--PNEVTFLTLLYACSHSGLKDEGMNCFEL 401

Query: 474 VIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           + K   L   V   TC+VD+ G+ G +++A  L   +P +   V W  ++S      + D
Sbjct: 402 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFD 461

Query: 532 KALNFFRQMLD 542
            A     ++++
Sbjct: 462 MAERIAERVIE 472



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 34/406 (8%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  +F++C  L  +++LHA    SG     F++  L+  YA+LGD   +R  F+ I  RN
Sbjct: 48  FSHIFRACQALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRN 107

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFT-------------LTS---------------- 140
           V +WN +I  YV+ G L  A   F +               LT+                
Sbjct: 108 VMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRR 167

Query: 141 -GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
            G++PD Y    + + C   R++V G+++H  V++ G + D+ V +SL HMY R G    
Sbjct: 168 EGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRD 227

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
                  +P  +  S N  ISG  Q+G+A  AL+    MR  GV  + +T  S +  C+ 
Sbjct: 228 GEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 287

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G  IH   +K G++  + V  +L++MY++ G +  + RV  +    D+V  +++
Sbjct: 288 LAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 347

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I+AY        A G F  M  AG +P+ +T ++L    +         +    + +   
Sbjct: 348 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 407

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
               V     +VD+  + G +N A  +   +PV+ D + W TL++ 
Sbjct: 408 LQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 453


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/645 (37%), Positives = 367/645 (56%), Gaps = 50/645 (7%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC-QSGNAVEALDILDEM 235
           +V  +  ++  + R G  N A ++F+ M V+ + +WN+M++GY  + G    A  + D +
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
               +    I +A  L     +D   + L      VK    +N  +S      +++ GMM
Sbjct: 64  PEPDIFSYNIMLACYL---HNADVESARLFFDQMPVKDTASWNTMISG-----FSQNGMM 115

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
             A  +F  M  R+ VSWN++I+ Y +S D   A   F              +  + S+V
Sbjct: 116 DQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFE-------------VAPVRSVV 162

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           A                   W         A++  + K G I  A   FE +P+K++++W
Sbjct: 163 A-------------------W--------TAMITGFMKFGKIELAEKYFEEMPMKNLVTW 195

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N +I GY +N  A   +++F+ M E     PN  +  S+L   S++ AL+ G ++H  + 
Sbjct: 196 NAMIAGYIENCQAENGLKLFKRMVESG-FRPNPSSLSSVLLGCSNLSALKLGKQVHQLIC 254

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           K+ + +++   T L+ MY KCG ++DA  LF  +P+   V WNA+IS +  HG G+KAL 
Sbjct: 255 KSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALY 314

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
            F +M DEG++PD ITFV++L+AC+H+G V  G  YF+ M  ++G++    HY C+VDL 
Sbjct: 315 LFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLL 374

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 655
           GR G L  A + I+ MP +P ++I+G LLGACRIH N+EL   A+  L  +D E+   YV
Sbjct: 375 GRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYV 434

Query: 656 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 715
            ++N+YA + +W+ V  VR   +D  + KTPG+S IEV + V  F +G+R HP+   I++
Sbjct: 435 QLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHE 494

Query: 716 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 775
           +L  L  KM+  GYVPD  + L DV E++K+ IL  HSE+LAIA+G+I  P  +PI++FK
Sbjct: 495 KLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFK 554

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           NLRVCGDCH+ TK+IS I  R IIVRD+ RFHHF+ G CSCGDYW
Sbjct: 555 NLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 213/444 (47%), Gaps = 61/444 (13%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV-RCGRLSEAVDCF 133
           K   V SS +++  +   GDL+ +   F+ ++ +   TWNSM++ Y  R G++  A   F
Sbjct: 1   KSSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLF 60

Query: 134 YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            +        PD +++  ++ AC                               Y     
Sbjct: 61  DRIP-----EPDIFSYN-IMLAC-------------------------------YLHNAD 83

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILP 252
              AR  FD MPV+D+ SWN MISG+ Q+G   +A ++   M +   VS +    A I  
Sbjct: 84  VESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWN----AMISG 139

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
                D  L+  L  +  V+     ++     +I  + KFG +  A + F++M  +++V+
Sbjct: 140 YVESGDLDLAKQLFEVAPVR-----SVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVT 194

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++IA Y ++         F  M ++G +P+  +L S+    + L+  +  + VH  I 
Sbjct: 195 WNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLIC 254

Query: 373 RR--GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           +    W   ++  G +++ MY K G +  A  +F  +P KDV++WN +I+GYAQ+G   +
Sbjct: 255 KSPVSW---NITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEK 311

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA---- 486
           A+ +F  M +   + P+  T+V++L A +H G +  GI+    ++++   + V       
Sbjct: 312 ALYLFDKMRD-EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRD---YGVEAKPDHY 367

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVP 510
           TC+VD+ G+ G++ +A+ L  ++P
Sbjct: 368 TCVVDLLGRGGKLVEAVDLIKKMP 391



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 24/197 (12%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H L+  S     + + T L++ Y   GDL  +   F  +  ++V TWN+MIS Y + 
Sbjct: 247 KQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQH 306

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------D 177
           G   +A+  F +     G++PD+ TF  VL AC         H   + LG E+      D
Sbjct: 307 GAGEKALYLFDKMR-DEGMKPDWITFVAVLSACN--------HAGFVDLGIEYFNSMVRD 357

Query: 178 VFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
             V A   H  C      R G    A  L   MP +   +    + G C+    +E  + 
Sbjct: 358 YGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEF 417

Query: 232 LDEMRLEGVSMDPITVA 248
             +  L   ++DP + A
Sbjct: 418 AAKNLL---NLDPESAA 431


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/538 (41%), Positives = 324/538 (60%), Gaps = 10/538 (1%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N +++ Y +   M  A   F+ M  +D  SWN++I  + Q+     A   F  M    + 
Sbjct: 42  NTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNV- 100

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
                 V+  ++++   +C +  S      +  +  + V+   A++  Y KLG I  A  
Sbjct: 101 ------VTWNAMISGYVECGDLDSALKLFEKAPF--KSVVAWTAMITGYMKLGRIGLAER 152

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +FE +P K++++WN +I GY +N  A + +++F+ M     I PN  T  S L   S + 
Sbjct: 153 LFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFG-IQPNSSTLSSALLGCSELS 211

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL+ G ++H  V K+ LC D    T L+ MY KCG ++D   LF QVPR   V WNA+IS
Sbjct: 212 ALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMIS 271

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG+G KAL  F +M+++G++PD ITFV++L AC+H+G    G +YFH M +++G+ 
Sbjct: 272 GYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLV 331

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
               HY CMVDL GRAG L  A + I+ MP +P A+++G LLGACRIH N E+   AS +
Sbjct: 332 AKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQK 391

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L  +D  +   YV ++N+YA   +W+ V  VR   +   + KTPG+S IEV +    F +
Sbjct: 392 LLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRS 451

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G++ HP+   I+ +L+ L  KMK  GYVPD  F L DV E++KE +L  HSE+LAIA+G+
Sbjct: 452 GDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGL 511

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I  PP +PI++FKNLRVCGDCH   K+ISQI  REIIVRD+ RFHHFKDG CSC DYW
Sbjct: 512 IKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 179/370 (48%), Gaps = 38/370 (10%)

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
            LK    W+  +A     M  + G    A++LF  +P  D+ S+N M+S Y ++ N   A
Sbjct: 2   TLKTTVTWNSVLAG----MSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERA 57

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVS----- 282
               ++M ++    D  +  +++   A++  +     + L +  K+ + +N  +S     
Sbjct: 58  QAFFEDMPIK----DTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVEC 113

Query: 283 ---------------------NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
                                  +I  Y K G +  A R+F++M E+++V+WN++IA Y 
Sbjct: 114 GDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYI 173

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +++        F TM   GIQP+  TL S     ++L+  +  R VH  + +     +D 
Sbjct: 174 ENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSP-LCDDT 232

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
             G +++ MY K G++     +F  +P +DV++WN +I+GYAQ+G   +A+ +F  M E 
Sbjct: 233 TAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIE- 291

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
             + P+  T+V++L A +H G    G+K  H+      L       TC+VD+ G+ G++ 
Sbjct: 292 KGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLV 351

Query: 501 DAMSLFYQVP 510
           +A+ L  ++P
Sbjct: 352 EAVDLIEKMP 361



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 37/276 (13%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           IK   S   ++  +A    +  +R  F  +  +NV TWN+MIS YV CG L  A+  F +
Sbjct: 66  IKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEK 125

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
               S                                     V    +++  Y + G   
Sbjct: 126 APFKS-------------------------------------VVAWTAMITGYMKLGRIG 148

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           +A +LF+ MP ++  +WNAMI+GY ++  A + + +   M   G+  +  T++S L  C+
Sbjct: 149 LAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCS 208

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  +H  + K  L  +     +LI+MY K G++    ++F Q+  RDVV+WN+
Sbjct: 209 ELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNA 268

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
           +I+ Y Q  +   A G F  M + G++PD +T V++
Sbjct: 269 MISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAV 304



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 5/240 (2%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           L      K+V + T ++  Y  LG +  +   F+ +  +N+ TWN+MI+ Y+   R  + 
Sbjct: 122 LFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDG 181

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLH 186
           V  F +  +  G++P+  T    L  C  L     G+++H  V K     D     SL+ 
Sbjct: 182 VKLF-RTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLIS 240

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MYC+ G+     KLF  +P RD  +WNAMISGY Q G   +AL + DEM  +G+  D IT
Sbjct: 241 MYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWIT 300

Query: 247 VASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
             ++L  C  +     G+   H     +GL         ++++  + G +  A+ + ++M
Sbjct: 301 FVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM 360



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 17/311 (5%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D +  N ++  Y +   +  A A FE +P+KD  SWNT+ITG+AQN    +A ++F +M 
Sbjct: 37  DAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMP 96

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA-TCLVDMYGKCGR 498
             N +     T+ +++  Y   G L   +K+  +       F   VA T ++  Y K GR
Sbjct: 97  TKNVV-----TWNAMISGYVECGDLDSALKLFEKAP-----FKSVVAWTAMITGYMKLGR 146

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           I  A  LF ++P  + V WNA+I+ +  + + +  +  FR M+  G++P+  T  S L  
Sbjct: 147 IGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLG 206

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS    +  G R  H +  +  +         ++ ++ + G L         +P R D  
Sbjct: 207 CSELSALQLG-RQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVP-RRDVV 264

Query: 619 IWGALLGACRIHGNMELGAVASDRLFE--VDSENVGYY-VLMSNIYANVGKWEGVDEVRS 675
            W A++     HG  +      D + E  +  + + +  VLM+  +A      GV    S
Sbjct: 265 TWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDL-GVKYFHS 323

Query: 676 LARDRGLKKTP 686
           +A+D GL   P
Sbjct: 324 MAKDYGLVAKP 334



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 30/215 (13%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H L+  S       + T L++ Y   G L      F  +  R+V TWN+MIS Y + 
Sbjct: 217 RQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQH 276

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------D 177
           G   +A+  F +  +  G++PD+ TF  VL AC         H     LG ++      D
Sbjct: 277 GEGKKALGLFDEM-IEKGMKPDWITFVAVLMACN--------HAGFTDLGVKYFHSMAKD 327

Query: 178 VFVAASLLHMYCRFGLANVARK------LFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
             + A   H  C   L   A K      L + MP +   +    + G C+     E  + 
Sbjct: 328 YGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEF 387

Query: 232 LDEMRLEGVSMDP------ITVASILPVCARSDNI 260
             +  L   ++DP      + +A++     R D++
Sbjct: 388 ASQKLL---NLDPASATGYVQLANVYAATKRWDHV 419



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 18/193 (9%)

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + L  M  K G++ +A  LF ++P   +V +N ++SC+  +   ++A  FF  M  +   
Sbjct: 11  SVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIK--- 67

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
            D  ++ +++T  + +  + + +  F +M  +     ++  +  M+  +   G L  A  
Sbjct: 68  -DTPSWNTMITGFAQNQQMDKARDLFLIMPTK-----NVVTWNAMISGYVECGDLDSALK 121

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVA-SDRLFEVDSEN--VGYYVLMSNIYAN 663
             +  P +   + W A+     I G M+LG +  ++RLFE   E   V +  +++    N
Sbjct: 122 LFEKAPFKSVVA-WTAM-----ITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIEN 175

Query: 664 VGKWEGVDEVRSL 676
               +GV   R++
Sbjct: 176 HRAEDGVKLFRTM 188


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/538 (40%), Positives = 323/538 (60%), Gaps = 2/538 (0%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N LI  Y K G +  A ++FD+M  R+V +WN+++A    S     + GFF  M++ G+Q
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD   L SL    A L D  + R VH +++R G    D+ +G+++  MY + G +    A
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGFLRDGEA 122

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
               LP  +++S NT I+G  QNG A  A+E F +M     +  N  T+VS + + S + 
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAG-VEANAVTFVSAVTSCSDLA 181

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL QG +IHA  IK  +   V V T LV MY +CG + D+  +  +   +  V  +A+IS
Sbjct: 182 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 241

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +G HG G KA+  F+QM+  G  P+ +TF++LL ACSHSGL  EG   F +M + +G++
Sbjct: 242 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 301

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P +KHY C+VDL GR+G L  A + I +MPV+PD  IW  LL AC+     ++    ++R
Sbjct: 302 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER 361

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           + E+D  +   YVL+SNI A   +WE V +VR   R++ ++K PG S +E+  ++  F T
Sbjct: 362 VIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCT 421

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
           G+ +H +  +I + L  +  +++  GY PD S V  D+E++EKE  L  HSE+LAIAF  
Sbjct: 422 GDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAF 481

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S P   PI++ KNLRVC DCH   K +S++  REI+VRD +RFHHFKDG CSCGDYW
Sbjct: 482 LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 188/371 (50%), Gaps = 13/371 (3%)

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
           W++ +       Y + G    ARKLFD+MP R+  +WNAM++G   SG   E+L     M
Sbjct: 3   WNILIGG-----YVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 57

Query: 236 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
           R EG+  D   + S+   CA   +++SG  +H Y+V+ GL+ ++ V ++L +MY + G +
Sbjct: 58  RREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFL 117

Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
           R        +   ++VS N+ I+   Q+ D   A  FF  M+ AG++ + +T VS  +  
Sbjct: 118 RDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSC 177

Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
           + L      + +H   ++ G  ++ V+ +  ++V MY++ G +  +  V       D++ 
Sbjct: 178 SDLAALAQGQQIHALAIKTG--VDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVL 235

Query: 415 WNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
            + +I+ Y  +G   +A+ +F QMM    E  PN+ T++++L A SH G   +G+     
Sbjct: 236 CSAMISAYGFHGHGQKAVGLFKQMMAAGAE--PNEVTFLTLLYACSHSGLKDEGMNCFEL 293

Query: 474 VIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGD 531
           + K   L   V   TC+VD+ G+ G +++A  L   +P +   V W  ++S      + D
Sbjct: 294 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFD 353

Query: 532 KALNFFRQMLD 542
            A     ++++
Sbjct: 354 MAERIAERVIE 364



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 5/341 (1%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP 144
           L+  Y   GDL  +R  FD +  RNV TWN+M++     G   E++  F+      G++P
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR-REGMQP 64

Query: 145 DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D Y    + + C   R++V G+++H  V++ G + D+ V +SL HMY R G         
Sbjct: 65  DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL 124

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
             +P  +  S N  ISG  Q+G+A  AL+    MR  GV  + +T  S +  C+    + 
Sbjct: 125 RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALA 184

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G  IH   +K G++  + V  +L++MY++ G +  + RV  +    D+V  +++I+AY 
Sbjct: 185 QGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG 244

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
                  A G F  M  AG +P+ +T ++L    +         +    + +       V
Sbjct: 245 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSV 304

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
                +VD+  + G +N A  +   +PV+ D + W TL++ 
Sbjct: 305 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSA 345


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/679 (35%), Positives = 374/679 (55%), Gaps = 8/679 (1%)

Query: 66   LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
            +HA  +  G    V+  + L+N YA    +  ++  FD +  RN+  WN+M+  Y + G 
Sbjct: 371  VHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGY 430

Query: 126  LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
             S+ +  F +     G  PD +T+  +L AC     L  G+++H  ++K  FE+++FV  
Sbjct: 431  ASKVMKLFSEMR-GCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVEN 489

Query: 183  SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
            +L+ MY + G    AR+ F+ +  RD+ SWNA+I GY Q  +  EA ++   M L+G++ 
Sbjct: 490  TLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAP 549

Query: 243  DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
            D +++ASIL  CA    +  G  +H ++VK GL+  L+  ++LI+MY K G +  A  VF
Sbjct: 550  DEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVF 609

Query: 303  DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
              M  R VVS N+IIA Y Q ND + A   F  MQ  G+ P  +T  SL           
Sbjct: 610  SCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLN 668

Query: 363  NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITG 421
              R +H  I +RG   +   +G +++ MY        A  +F      K  I W  +I+G
Sbjct: 669  LGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISG 728

Query: 422  YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            + QNG + EA++++Q M   N   P+Q T+ S+L A S + +L  G  IH+ +    L  
Sbjct: 729  HTQNGCSEEALQLYQEMHR-NNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDS 787

Query: 482  DVFVATCLVDMYGKCGRIDDAMSLFYQV-PRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D    + +VDMY KCG +  ++ +F ++  ++  + WN++I     +G  + AL  F +M
Sbjct: 788  DELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEM 847

Query: 541  LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
                +RPD +TF+ +LTACSH+G VSEG+  F +M   + I P L H  CM+DL GR G 
Sbjct: 848  KHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGF 907

Query: 601  LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
            L  A  FI  +   P+A IW  LLGACRIHG+   G  A+++L E++ EN   YVL+SNI
Sbjct: 908  LKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNI 967

Query: 661  YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
            YA  G W+ V+ VR   R++GL+K PG S I V  K ++F  G++ HP   +I+  L++L
Sbjct: 968  YAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDL 1027

Query: 721  TAKMKSLGYVPDKSFVLQD 739
             A MK  GY+ +   +L+D
Sbjct: 1028 IALMKEDGYIAETDSLLED 1046



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 185/600 (30%), Positives = 296/600 (49%), Gaps = 78/600 (13%)

Query: 50  FDDLFQSCTKLHHV-KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           FD+  Q   +     K +HA  +  G        + +V+ YA  G++ F+   F+ +  R
Sbjct: 86  FDETPQRLAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKR 145

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           ++  WNS++S+Y R G L + + CF       G+ P+ +T+  VL +C  LVD   GK++
Sbjct: 146 DILAWNSVLSMYSRQGSLEQVIWCFGSLQ-NCGVSPNQFTYAIVLSSCARLVDIDLGKQV 204

Query: 166 HCSVLKLGFEWDVFVAASLLHM-------------------------------YCRFGLA 194
           HC V+K+GFE++ F   SL+ M                               Y + GL 
Sbjct: 205 HCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLP 264

Query: 195 NVARKLFDDM-----------------------------------PVRDSGSWNAMISGY 219
             A K+F+DM                                   P  +  +WN MISG+
Sbjct: 265 EEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGH 324

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            + G  +EA+D    M   GV     T+ S+L   A  + +  GLL+H   +K GL  N+
Sbjct: 325 VKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNV 384

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           +V ++LINMYAK   M  A +VFD + ER++V WN+++  Y Q+         F+ M+  
Sbjct: 385 YVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGC 444

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G  PD  T  S+ S  A L      R +H FI++   F  ++ + N +VDMYAK G +  
Sbjct: 445 GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHN-FEYNLFVENTLVDMYAKCGALEE 503

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A   FE +  +D +SWN +I GY Q     EA  +F+ M   + I P++ +  SIL   +
Sbjct: 504 ARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRM-ILDGIAPDEVSLASILSGCA 562

Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
           ++ AL QG ++H  ++K+ L   ++  + L+DMY KCG I+ A  +F  +P  S V  NA
Sbjct: 563 NLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNA 622

Query: 520 IISCHGIHGQGD--KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           II+    + Q D  +A++ F++M +EG+ P  ITF SLL AC+    ++ G++   ++Q+
Sbjct: 623 IIAG---YAQNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQK 679



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 253/528 (47%), Gaps = 67/528 (12%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K IH   LK GF     + ++++ +Y + G    A K F+ +  RD  +WN+++S Y + 
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
           G+  + +     ++  GVS +  T A +L  CAR  +I  G  +H  ++K G EFN F  
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +LI+MY+K G +  A ++FD +++ D VSW ++IA Y Q   P  A   F  MQ+ G+ 
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 343 PDLLTLVSLTSI---VAQLNDC-------RNSRSVHGFIM-----RRGWFMEDV-----I 382
           PD +  V++ +    + +L+D         N+  V   +M     +RG  +E +     +
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNM 340

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPV--------------------------------- 409
               V    + LG + SA A  E L                                   
Sbjct: 341 WKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKM 400

Query: 410 ------------KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
                       ++++ WN ++ GYAQNG AS+ +++F  M  C    P++ TY SIL A
Sbjct: 401 EAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCG-FWPDEFTYTSILSA 459

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + +  L  G ++H+ +IK+   +++FV   LVDMY KCG +++A   F  +    +V W
Sbjct: 460 CACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSW 519

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           NAII  +      D+A N FR+M+ +G+ PD ++  S+L+ C++   + +G++  H    
Sbjct: 520 NAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQ-VHCFLV 578

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
           + G++  L     ++D++ + G +  A      MP R   S+   + G
Sbjct: 579 KSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAG 626


>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 211/519 (40%), Positives = 321/519 (61%), Gaps = 5/519 (0%)

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQLNDCR 362
           M ERD+V+WNS+I+ Y             + M   + G +P+ +T +S+ S      +  
Sbjct: 1   MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
               +HG +M+ G  +E+V + NA++++Y K G + S+C +FE L VK+++SWNT+I  +
Sbjct: 61  EGVCIHGLVMKSG-VLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIH 119

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            QNGLA E +  F M      + P+Q T++++L     +G +R    IH  ++      +
Sbjct: 120 LQNGLAEEGLAYFNMSRWVG-LKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNAN 178

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
             + T L+D+Y K GR++D+ ++F ++    S+ W A+++ +  HG G  A+  F  M+ 
Sbjct: 179 TCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVH 238

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G+ PDH+TF  LL ACSHSGLV EG+ YF  M + + I+P L HY CMVDL GR+G L 
Sbjct: 239 YGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQ 298

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A+  I+ MP+ P + +WGALLGACR++ + +LG  A+ RLFE++  +   Y+++SNIY+
Sbjct: 299 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYS 358

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTA 722
             G W+    +R+L + +GL +  G+S IE  NK+  F  G+ +HP+ EKI  +L+ +  
Sbjct: 359 ASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRK 418

Query: 723 KMKS-LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
           KMKS LG+     FVL DV+ED KE ++  HSE++A+AFG++   P  PI I KNLR+CG
Sbjct: 419 KMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICG 478

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH   K IS I +R II+RDS RFHHF +G CSC DYW
Sbjct: 479 DCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 517



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 190/381 (49%), Gaps = 11/381 (2%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNIL 261
           MP RD  +WN++ISGY   G   +  ++L  M    V   P  +T  S++  C    N  
Sbjct: 1   MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G+ IH  ++K G+   + V N L+N+Y K G +  + ++F+ +  +++VSWN++I  + 
Sbjct: 61  EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHL 120

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q+        +F   +  G++PD  T +++  +   +   R S+ +HG IM  G F  + 
Sbjct: 121 QNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCG-FNANT 179

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            I  A++D+YAKLG +  +  VF  +   D ++W  ++  YA +G   +AI+ F++M   
Sbjct: 180 CITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHY 239

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC---FDVFVATCLVDMYGKCGR 498
             ++P+  T+  +L A SH G + +G      + K        D +  +C+VD+ G+ G 
Sbjct: 240 G-LSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHY--SCMVDLMGRSGL 296

Query: 499 IDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           + DA  L  ++P   SS  W A++    ++          +++ +   R D   ++ L  
Sbjct: 297 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPR-DGRNYIMLSN 355

Query: 558 ACSHSGLVSEGQRYFHMMQEE 578
             S SGL  +  R  ++M+++
Sbjct: 356 IYSASGLWKDASRIRNLMKQK 376



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 167/372 (44%), Gaps = 15/372 (4%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKAC---RNLVDGK 163
           R++  WNS+IS Y   G L +  +   +   +  G RP+  TF  ++ AC    N  +G 
Sbjct: 4   RDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGV 63

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH  V+K G   +V V  +L+++Y + G    + KLF+D+ V++  SWN MI  + Q+G
Sbjct: 64  CIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNG 123

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
            A E L   +  R  G+  D  T  ++L VC     +     IH  I+  G   N  ++ 
Sbjct: 124 LAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITT 183

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
            L+++YAK G +  +  VF ++   D ++W +++AAY        A   F  M   G+ P
Sbjct: 184 ALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSP 243

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T   L +  +        R     + +R      +   + +VD+  + G++  A  +
Sbjct: 244 DHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGL 303

Query: 404 FEGLPVKDVIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQG-TYVSILPAY 458
            + +P++     W  L+     Y    L ++A       +   E+ P  G  Y+ +   Y
Sbjct: 304 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKA------AKRLFELEPRDGRNYIMLSNIY 357

Query: 459 SHVGALRQGIKI 470
           S  G  +   +I
Sbjct: 358 SASGLWKDASRI 369



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 47  EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E+ F  +  +C    + +    +H L++ SG ++ V     L+N Y   GDL  S   F+
Sbjct: 43  EVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFE 102

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---V 160
            +S +N+ +WN+MI ++++ G L+E    ++  +   GL+PD  TF  VL+ C ++    
Sbjct: 103 DLSVKNLVSWNTMIVIHLQNG-LAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVR 161

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
             + IH  ++  GF  +  +  +LL +Y + G    +  +F ++   DS +W AM++ Y 
Sbjct: 162 LSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYA 221

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNL 279
             G   +A+   + M   G+S D +T   +L  C+ S  +  G      + K + +E  L
Sbjct: 222 THGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRL 281

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              + ++++  + G+++ A  +  +M ME     W +++ A
Sbjct: 282 DHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 322


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/723 (33%), Positives = 408/723 (56%), Gaps = 25/723 (3%)

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 172
           MI+  VR GR  +A++ + +     G+  D +    ++ AC   + L +G+++H  ++  
Sbjct: 1   MIAACVREGRPLQALELWGEME-ERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIIT 59

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF  D+ +  +LL MY + G  + A+++F+ M ++D  +W+++I+ Y ++G    A+ + 
Sbjct: 60  GFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLY 119

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
             M  EGV  + +T A  L  CA    +  G  IH  I+   +  +  + ++L+NMY K 
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSL 351
             M  A +VF+ M  R+V S+ ++I+AY Q+ +   A   F+ M +   I+P+  T  ++
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
              V  L +    R VH  +  RG F  +V++ NA+V MY K G    A  VF+ +  ++
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRG-FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN 298

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           VISW ++I  YAQ+G   EA+ +F+ M+    + P+  ++ S L A + +GAL +G +IH
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRMD----VEPSGVSFSSALNACALLGALDEGREIH 354

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
            RV++  L     + T L+ MY +CG +DDA  +F ++    +   NA+I+    HG+  
Sbjct: 355 HRVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKK 413

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +AL  +R+M  EG+  D ITFVS+L ACSH+ LV++ + +   +  + G+ P ++HY CM
Sbjct: 414 QALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCM 473

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VD+ GR+G LG A   ++ MP + DA  W  LL  C+ HG+++ G  A+ ++FE+     
Sbjct: 474 VDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAET 533

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK-- 709
             YV +SN+YA   +++    VR    +RG+ +    S IE++N++ +F +G R   +  
Sbjct: 534 LPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEG 593

Query: 710 -----YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE----EDEKEHILTSHSERLAIAF 760
                 E++   L  L   MK  GYVPD   V  + +    E+EK+  L  HSERLAIA+
Sbjct: 594 HDGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAY 653

Query: 761 GIISS--PPKS-PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           G+I++  P  S P+++  + RVC  CH+  K +S ITE+ I VRD +RFHHF+ G CSCG
Sbjct: 654 GLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCG 713

Query: 818 DYW 820
           D+W
Sbjct: 714 DHW 716



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 269/562 (47%), Gaps = 34/562 (6%)

Query: 42  ENESREIDFD-----DLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLG 93
           E E R I  D      L  +CTKL  +   +RLH  L+++G    +   T L+  YA  G
Sbjct: 20  EMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCG 79

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
            L  ++  F+ +  ++++ W+S+I+ Y R GR   AV   Y+  +  G+ P+  TF   L
Sbjct: 80  SLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAV-VLYRRMIAEGVEPNVVTFACAL 138

Query: 154 KACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
             C +   L DG+ IH  +L      D  +  SLL+MY +      ARK+F+ M  R+  
Sbjct: 139 GGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVR 198

Query: 211 SWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
           S+ AMIS Y Q+G   EAL++   M ++E +  +  T A+IL       N+  G  +H +
Sbjct: 199 SYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRH 258

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           +   G + N+ V N L+ MY K G    A +VFD M  R+V+SW S+IAAY Q  +P  A
Sbjct: 259 LASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEA 318

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  M    ++P  ++  S  +  A L      R +H  ++     +    +  +++ 
Sbjct: 319 LNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAN--LASPQMETSLLS 373

Query: 390 MYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
           MYA+ G ++ A  VF  +  +D  S N +I  + Q+G   +A+ +++ ME+  E  P  G
Sbjct: 374 MYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQ--EGIPADG 431

Query: 450 -TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDA 502
            T+VS+L A SH       +    R     L  D  V        C+VD+ G+ GR+ DA
Sbjct: 432 ITFVSVLVACSHT-----SLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDA 486

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
             L   +P ++ +V W  ++S    HG  D+     R++  E    + + +V L    + 
Sbjct: 487 EELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVF-ELAPAETLPYVFLSNMYAA 545

Query: 562 SGLVSEGQRYFHMMQEEFGIKP 583
           +    + +R    M+E    +P
Sbjct: 546 AKRFDDARRVRKEMEERGVTRP 567


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/691 (35%), Positives = 398/691 (57%), Gaps = 21/691 (3%)

Query: 137 TLTSGLRPDFYTFPP----VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           TL+  L+P     PP     L+ C    +  ++H   +K        V++ LL +Y    
Sbjct: 5   TLSHSLQP---FLPPNLHFPLQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPR 61

Query: 193 LANV--ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
           + N+  A  LFD +      SWN +I  Y ++  + +A+ +  ++  + V  D  T+  +
Sbjct: 62  INNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVP-DSFTLPCV 120

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L  CAR   +  G  IH  ++K G   + FV ++L++MY+K G +    +VFD+M ++DV
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSWNS+I  Y +  +   A   F  M +     D  +   L   +++      +R V   
Sbjct: 181 VSWNSLIDGYARCGEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLEAARDVFDR 236

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           +  R     + +  NA+++ Y K G  N+A  +F+ +P + +++WN++ITGY +N   ++
Sbjct: 237 MPIR-----NSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTK 291

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A+++F++M    +I+PN  T +  + A S + +L  G  +H+ ++K+    D  + T L+
Sbjct: 292 ALKLFEVMLR-EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLI 350

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           +MY KCG +  A+ +F  +P+     W ++I   G+HG  ++ L  F +M   G++P  I
Sbjct: 351 EMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAI 410

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           TF+ +L ACSH+G   +  RYF MM  ++GIKP ++HYGC++D+  RAGHL  A + I+ 
Sbjct: 411 TFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIER 470

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP++ +  IW +LL   R HGN+ +G  A+  L ++  +  G YV++SN+YA  G WE V
Sbjct: 471 MPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKV 530

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            +VR + + +G+KK PG SSIE    +  F  G+++HP+ E+IY +L  +  K+   G++
Sbjct: 531 RQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHI 590

Query: 731 PDKSFVLQDVEED-EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKF 789
           PD + VL  +EED EKE  L +HSERLAIAFG+++    SPI+I KNLR+C DCH  TK 
Sbjct: 591 PDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKL 650

Query: 790 ISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +S I  REII+RD +RFHHFK G CSC D+W
Sbjct: 651 LSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 243/488 (49%), Gaps = 31/488 (6%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNVY 111
            Q+C       +LHAL + +  +     S++L+  YA+  + +L ++   FD I    + 
Sbjct: 22  LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCS 168
           +WN +I  Y+   R ++A+  F +  L     PD +T P VLK C     L +GK+IH  
Sbjct: 82  SWNLLIKCYIENQRSNDAIALFCK--LLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGL 139

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           VLK+GF  D FV +SL+ MY + G   + RK+FD M  +D  SWN++I GY + G    A
Sbjct: 140 VLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 199

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLIN 287
           L++ +EM       D  +   ++   ++S  + +   +     +++ + +     N +IN
Sbjct: 200 LEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSW-----NAMIN 250

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
            Y K G    A  +FDQM ER +V+WNS+I  YE++     A   F  M +  I P+  T
Sbjct: 251 GYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTT 310

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           ++   S  + +      R VH +I++ G F  D ++G  +++MY+K G + SA  VF  +
Sbjct: 311 ILGAVSAASGMVSLGTGRWVHSYIVKSG-FKTDGVLGTLLIEMYSKCGSVKSALRVFRSI 369

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
           P K +  W ++I G   +GL  + +E+F  M     + P+  T++ +L A SH G     
Sbjct: 370 PKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTG-LKPHAITFIGVLNACSHAGFAED- 427

Query: 468 IKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAI 520
               A      + +D  +        CL+D+  + G +++A     ++P +++ V W ++
Sbjct: 428 ----AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSL 483

Query: 521 ISCHGIHG 528
           +S    HG
Sbjct: 484 LSGSRKHG 491


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/590 (36%), Positives = 349/590 (59%), Gaps = 11/590 (1%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M L G S       + +  C     +  G  +H  ++       +F+   L+ MY + G 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A  V D+M ER VVSW ++I+ Y Q+   + A   F  M +AG  P+  TL ++ + 
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            +        + VH  +++   F   + +G++++DMYAK   I  A  VF+ LP +DV+S
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTN-FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVS 211

Query: 415 WNTLITGYAQNGLASEAIEVFQMM----EECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
              +I+GYAQ GL  EA+++F+ +     +CN +     T+ +++ A S + +L  G ++
Sbjct: 212 CTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHV-----TFTTLVTALSGLASLDYGKQV 266

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           HA +++  L F V +   L+DMY KCG++  +  +F  +   S V WNA++  +G HG G
Sbjct: 267 HALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLG 326

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            + ++ F+ +  E V+PD +T +++L+ CSH GLV EG   F  + +E     H  HYGC
Sbjct: 327 HEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGC 385

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           ++DL GR+G L  A N I+NMP     SIWG+LLGACR+H N+ +G + + +L E++ EN
Sbjct: 386 IIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPEN 445

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
            G YV++SNIYA  G W+ V +VR L  ++ + K PG S I ++  +  F++  R HP  
Sbjct: 446 AGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSK 505

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           + I  +++ +   +K+ G+VPD S VL DV++++KE +L  HSE+LAI FG++++PP   
Sbjct: 506 KDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLT 565

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I++ KNLR+C DCHN+ KF+S++ EREI +RD NRFH    G C+CGDYW
Sbjct: 566 IRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 212/395 (53%), Gaps = 12/395 (3%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G    F+ +   + AC   R L +G+++H  ++   +   VF+   L+ MY R G  + A
Sbjct: 37  GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 96

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R + D MP R   SW  MISGY Q+   VEALD+  +M   G   +  T+A++L  C+  
Sbjct: 97  RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 156

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            +I  G  +H  +VK   E ++FV ++L++MYAK   ++ A RVFD + ERDVVS  +II
Sbjct: 157 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 216

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG-- 375
           + Y Q      A   F  +   G+Q + +T  +L + ++ L      + VH  I+R+   
Sbjct: 217 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 276

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +F   V + N+++DMY+K G +  +  VF+ +  + V+SWN ++ GY ++GL  E I +F
Sbjct: 277 FF---VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF 333

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYG 494
           + + +  E+ P+  T +++L   SH G + +G+ I   V+K            C++D+ G
Sbjct: 334 KDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 391

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
           + GR++ A++L   +P  S+   W +++    +H 
Sbjct: 392 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 426



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 221/433 (51%), Gaps = 34/433 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++HA ++ +     VF  T+LV  Y   G L  +R+  D +  R+V +W +MIS Y + 
Sbjct: 62  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT 121

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            R  EA+D F +  L +G  P+ YT   VL +C   +++  GK++H  ++K  FE  +FV
Sbjct: 122 ERHVEALDLFIKM-LRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 180

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SLL MY +      AR++FD +P RD  S  A+ISGY Q G   EALD+  ++  EG+
Sbjct: 181 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 240

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + +T  +++   +   ++  G  +H  I++  L F + + N+LI+MY+K G + ++ R
Sbjct: 241 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 300

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M+ER VVSWN+++  Y +          F  + +  ++PD +TL      +A L+ 
Sbjct: 301 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL------LAVLSG 353

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNA-----------VVDMYAKLGIINSACAVFEGLPV 409
           C      HG ++  G  + D ++              ++D+  + G +  A  + E +P 
Sbjct: 354 CS-----HGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPF 408

Query: 410 KDVIS-WNTLITGYAQNGLASEAIEVFQMM-EECNEINP-NQGTYVSILPAYSHVGALRQ 466
           +   S W +L+     +      + V +++ ++  E+ P N G YV +   Y+  G  + 
Sbjct: 409 ESTPSIWGSLLGACRVHA----NVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKD 464

Query: 467 GIKIHARVIKNCL 479
             K+   +++  +
Sbjct: 465 VFKVRKLMLEKTV 477



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 17/290 (5%)

Query: 40  CLENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C+ NE        +  SC+    ++  K++H+LLV +     +F  + L++ YA   ++ 
Sbjct: 139 CIPNE---YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQ 195

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +R  FD +  R+V +  ++IS Y + G   EA+D F Q   + G++ +  TF  ++ A 
Sbjct: 196 EARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL-YSEGMQCNHVTFTTLVTAL 254

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L     GK++H  +L+    + V +  SL+ MY + G    +R++FD+M  R   SWN
Sbjct: 255 SGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWN 314

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           AM+ GY + G   E + +  ++  E V  D +T+ ++L  C+    +  GL I   +VK 
Sbjct: 315 AMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE 373

Query: 274 GLEFNLFVSNN---LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             +  L  + +   +I++  + G +  AL + + M  E     W S++ A
Sbjct: 374 --QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 421


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/682 (36%), Positives = 391/682 (57%), Gaps = 14/682 (2%)

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           H+L V  G I  V++   ++N Y    +L  +   FD +  R+  +WN+MI+ ++ CG L
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKIHCSVLKLGFEWDVFVAAS 183
             + D   +   + G   D YTF  +LK  A   +   G+++H  ++K+G+  +V+  ++
Sbjct: 81  EASWDVL-RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           LL MY +      A   F  +   ++ SWNAMI+GY Q+G+   A  +LD M  EG  +D
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199

Query: 244 PITVASILPVCARSD--NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
             T A +LP+   +D  N+ S L  H  I+KHGLE    + N LI  Y+K G +  A R+
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQL--HGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 302 FDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           FD     RD+V+WNS++AAY   +    A      MQ+ G +PDL +  S+ S     N 
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK--LGIINSACAVFEGLPVKDVISWNTL 418
             N RS+HG +++RG F + V I NA++ MY K   G +  A  +FE L  KD +SWN++
Sbjct: 318 SNNGRSLHGLVIKRG-FEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           +TG +Q G + +A++ F  M     ++ +  ++ ++L + S +   + G +IH   +K  
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSA-AMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L  + FV++ L+ MY KCG I+DA   F +  ++SS+ WNA++  +  HGQ + AL+ F 
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M ++ V+ DHITFV++LTACSH GLV +G ++   M+ ++G+ P ++HY C VDL+GR+
Sbjct: 496 LMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRS 555

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A   I+ MP +PD ++W   LGACR  GN+EL    +  L E++ E    YVL+S
Sbjct: 556 GRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLS 615

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+Y N+ +W+   +V+ L ++RG+KK PGWS IEVNN V  F   + +HP  ++IY  L 
Sbjct: 616 NMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLE 675

Query: 719 NLTAKMKSLGYVPD-KSFVLQD 739
            L  ++  +      KSF+ Q+
Sbjct: 676 VLLEEITRMEDADGFKSFLEQE 697



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 256/517 (49%), Gaps = 38/517 (7%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            H  +++H++++  G  + V++ + L++ YA    L  +  +F  IS  N  +WN+MI+ 
Sbjct: 115 FHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMING 174

Query: 120 YVRCGRLSEA---VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-------KKIHCSV 169
           Y + G    A   +DC  Q     G + D  T+ P+L     L+D         ++H  +
Sbjct: 175 YAQAGDRETAFWLLDCMEQ----EGEKVDDGTYAPLLP----LLDDADFCNLTSQLHGKI 226

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEA 228
           +K G E    +  +L+  Y + G  + A+++FD    +RD  +WN++++ Y        A
Sbjct: 227 IKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLA 286

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
             +L +M+  G   D  +  SI+  C   +   +G  +H  ++K G E ++ +SN LI+M
Sbjct: 287 FKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISM 346

Query: 289 YAK--FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           Y K  +G M+ AL +F+ +  +D VSWNSI+    Q+     A   F  M+ A +  D  
Sbjct: 347 YLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHY 406

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           +  ++    + L   +  + +H   ++ G    +  + ++++ MY+K GII  A   FE 
Sbjct: 407 SFSAVLRSCSDLATFQLGQQIHVLALKYG-LESNEFVSSSLIFMYSKCGIIEDARRSFEE 465

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
                 I+WN L+ GYAQ+G  + A+++F +MEE  ++  +  T+V++L A SH+G + Q
Sbjct: 466 ASKNSSITWNALMFGYAQHGQCNVALDLFFLMEE-KKVKMDHITFVAVLTACSHIGLVEQ 524

Query: 467 GIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNA 519
           G K        C+  D  V        C VD+YG+ GR+++A +L  ++P +  +  W  
Sbjct: 525 GCK-----FLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKT 579

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSL 555
            +      G  + A      +L+  + P +H T+V L
Sbjct: 580 FLGACRSCGNIELACQVAGHLLE--MEPEEHCTYVLL 614



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 176/374 (47%), Gaps = 7/374 (1%)

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           LL H   VK G   +++  NN++N Y K   +R A  +FD+M  RD VSWN++IA +   
Sbjct: 18  LLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINC 77

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            +   +      M+  G + D  T  S+   +A        + VH  I++ G + E+V  
Sbjct: 78  GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMG-YAENVYA 136

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           G+A++DMYAK   +  A   F  +   + +SWN +I GYAQ G    A  +   ME+  E
Sbjct: 137 GSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGE 196

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
              + GTY  +LP            ++H ++IK+ L     +   L+  Y KCG +DDA 
Sbjct: 197 -KVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAK 255

Query: 504 SLF-YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
            +F         V WN++++ + +  Q D A      M + G  PD  ++ S+++AC + 
Sbjct: 256 RIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNE 315

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA--GHLGMAHNFIQNMPVRPDASIW 620
            + + G R  H +  + G +  +     ++ ++ ++  G +  A    +++  +   S W
Sbjct: 316 NISNNG-RSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVS-W 373

Query: 621 GALLGACRIHGNME 634
            ++L      G+ E
Sbjct: 374 NSILTGLSQTGSSE 387



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 10/186 (5%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC+ L   +   ++H L +  G     F S+ L+  Y+  G +  +R +F+  S
Sbjct: 408 FSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG-- 162
             +  TWN+++  Y + G+ + A+D F+       ++ D  TF  VL AC +  LV+   
Sbjct: 468 KNSSITWNALMFGYAQHGQCNVALDLFFLME-EKKVKMDHITFVAVLTACSHIGLVEQGC 526

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 221
           K + C     G    +   A  + +Y R G    A+ L ++MP + D+  W   + G C+
Sbjct: 527 KFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFL-GACR 585

Query: 222 SGNAVE 227
           S   +E
Sbjct: 586 SCGNIE 591


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 257/662 (38%), Positives = 372/662 (56%), Gaps = 62/662 (9%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRD 208
           +L  C++  + K+IH  ++K G     F  + L+  +C    FG  + A  LF+ +   +
Sbjct: 38  LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQPN 96

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
              WN MI G   S + V A+D    M L GV  +  T   +L  CA+      G  IH 
Sbjct: 97  QFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHA------------------------------ 298
           +++K GLE + FV  +LINMYA+ G + +A                              
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216

Query: 299 -LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
             R+F+++  RD VSWN++IA Y QS     A  FF  M++A + P+  T+V++ S  AQ
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
                    V  +I   G    ++ + NA++DMY+K G ++ A  +FEG+  KD+ISWN 
Sbjct: 277 SGSLELGNWVRSWIEDHG-LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I GY+      EA+ +F+ M++ N + PN  T+VSILPA +++GAL  G  IHA + K 
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 478 CLCF-DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
            L   +  + T L+DMY KCG I+ A  +F  +   S   WNA+IS   +HG  + AL  
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           FRQM DEG  PD ITFV +L+ACSH+GLV  G++ F  M E++ I P L+HYGCM+DL G
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           RAG    A   ++NM ++PD +IWG+LLGACR+HGN+ELG  A+  LFE++ EN G YVL
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SNIYA  G+W+ V  +R+   D+G+KK             DI+           K+ DE
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKXQ-----------DIY-----------KMLDE 612

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
           +     +    G VPD S VL D++E+ KE  L+ HSE+LAIAFG+IS+ P++ I+I KN
Sbjct: 613 IDQSFGERP--GXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKN 670

Query: 777 LR 778
           LR
Sbjct: 671 LR 672



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 275/517 (53%), Gaps = 46/517 (8%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L  +C    ++K++H+ ++ +G   T F+ +KL+ F A    G+LS++   F+ I   N 
Sbjct: 38  LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQ 97

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHC 167
           + WN+MI           A+D FY   L  G+ P+ YTFP +LK+C  +    +GK+IH 
Sbjct: 98  FIWNTMIRGNSLSSSPVGAID-FYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156

Query: 168 SVLKLGFEWDVFVAASLLHMYCR---FGLANV---------------------------- 196
            VLKLG E D FV  SL++MY +    G A +                            
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           AR+LF+++PVRD+ SWNAMI+GY QSG   EAL    EM+   V+ +  T+ ++L  CA+
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
           S ++  G  +  +I  HGL  NL + N LI+MY+K G +  A  +F+ + E+D++SWN +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y   N    A   F  MQQ+ ++P+ +T VS+    A L      + +H +I ++  
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFL 396

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            + +  +  +++DMYAK G I +A  VF G+  K + SWN +I+G A +G A+ A+E+F+
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----CLVDM 492
            M +     P+  T+V +L A SH G +  G +  + ++++   +D+        C++D+
Sbjct: 457 QMRD-EGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVED---YDISPKLQHYGCMIDL 512

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
            G+ G  D+A +L   +  +     W +++    +HG
Sbjct: 513 LGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 199/470 (42%), Gaps = 42/470 (8%)

Query: 44  ESREIDFDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS-- 98
           E     F  L +SC K+      K++H  ++  G     F  T L+N YA  G+L ++  
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188

Query: 99  -----------------------------RHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
                                        R  F+ I  R+  +WN+MI+ Y + GR  EA
Sbjct: 189 VFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEA 248

Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLH 186
           +  F+Q    + + P+  T   VL AC    +L  G  +   +   G   ++ +  +L+ 
Sbjct: 249 L-AFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALID 307

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MY + G  + AR LF+ +  +D  SWN MI GY    +  EAL +  +M+   V  + +T
Sbjct: 308 MYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVT 367

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFDQM 305
             SILP CA    +  G  IH YI K  L   N  +  +LI+MYAK G +  A +VF  M
Sbjct: 368 FVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
             + + SWN++I+          A   F  M+  G +PD +T V + S  +        R
Sbjct: 428 KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGR 487

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQ 424
                ++        +     ++D+  + G+ + A A+ + + +K D   W +L+     
Sbjct: 488 QCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRV 547

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           +G         + + E    NP  G YV +   Y+  G      +I  ++
Sbjct: 548 HGNVELGEFAAKHLFELEPENP--GAYVLLSNIYATAGRWDDVARIRTKL 595


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/675 (36%), Positives = 371/675 (54%), Gaps = 15/675 (2%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L  G ++H +++KLGF  D  +  +L+ MY + G  ++A ++FD MP R+  SW A++ 
Sbjct: 19  SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 78

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G+   G A E L +  EMR  G S +  T+++ L  C       +G+ IH   V+ G E 
Sbjct: 79  GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEG 136

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V+N+L+ MY+K      A RVFD +  R++ +WNS+I+ Y  +     +   F  MQ
Sbjct: 137 HDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 196

Query: 338 QA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF-MEDVIIGNAVVDMYAKLG 395
           +    QPD  T  SL    + L   R    VH  +  RG     + I+  A++D+Y K  
Sbjct: 197 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCH 256

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            +  A  VF+GL  ++ I W T+I G+AQ G   EA+ +F+       +  +     S++
Sbjct: 257 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG-VRADGHVLSSVV 315

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
             ++    + QG ++H    K     DV VA  LVDMY KCG   +A   F ++P  + V
Sbjct: 316 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 375

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A+I+  G HG G +A++ F +M +EGV  D + +++LL+ACSHSGLV E +RYF  +
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 435

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
            ++  ++P  +HY CMVDL GRAG L  A   I +MP+ P   +W  LL ACR+H ++ +
Sbjct: 436 CQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAV 495

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G    D L  VD +N   YV++SNI A  G+W     +R   R +GL+K  G S  EV+ 
Sbjct: 496 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 555

Query: 696 KVDIFY-TGNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSFVLQDVEEDEKEHILTSHS 753
           +V  FY  G+  HP+   I   LR + A+M+  LGY  D    L DV+E+ +   L  HS
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHS 615

Query: 754 ERLAIAFGIISSPPKSP--------IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           ERLA+   ++               ++++KNLRVCGDCH + K +S +  R ++VRD+NR
Sbjct: 616 ERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANR 675

Query: 806 FHHFKDGICSCGDYW 820
           FH F++G CSC DYW
Sbjct: 676 FHRFQNGACSCRDYW 690



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 230/474 (48%), Gaps = 19/474 (4%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LHA L+  G       +  L++ YA  G L  +   FD +  RNV +W +++  ++  G
Sbjct: 25  QLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHG 84

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-GKKIHCSVLKLGFEWDVFVAAS 183
              E +  F +    SG  P+ +T    LKAC      G +IH   ++ GFE    VA S
Sbjct: 85  EARECLRLFGEMR-GSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANS 143

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSM 242
           L+ MY +      AR++FD +P R+  +WN+MISGY  +G   ++L +  EM R      
Sbjct: 144 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLE--FNLFVSNNLINMYAKFGMMRHALR 300
           D  T AS+L  C+       G  +H  +   G+    N  ++  L+++Y K   +  A++
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD +  R+ + W ++I  + Q      A   F     +G++ D   L S+ ++ A    
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 323

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + VH +  +    + DV + N++VDMY K G+   A   F  +P ++V+SW  +I 
Sbjct: 324 VEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMIN 382

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G  ++G   EAI++F+ M+E   +  ++  Y+++L A SH G + +  +  +R+     C
Sbjct: 383 GVGKHGHGREAIDLFEEMQE-EGVEADEVAYLALLSACSHSGLVDECRRYFSRI-----C 436

Query: 481 FDVFVA------TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
            D  +        C+VD+ G+ G + +A  L   +P   +V  W  ++S   +H
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 490



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 220/421 (52%), Gaps = 19/421 (4%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A +L   AR  ++  G+ +H  ++K G   +  ++NNLI+MYAK G +  A  VFD M 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ER+VVSW +++  +    +       F  M+ +G  P+  TL +  ++ A     R    
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSA--TLKACGGGTRAGVQ 124

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG  +R G+   DV + N++V MY+K      A  VF+ +P +++ +WN++I+GYA  G
Sbjct: 125 IHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL--CFDVF 484
              +++ VF+ M+  ++  P++ T+ S+L A S +GA R+G ++HA +    +    +  
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           +A  L+D+Y KC R+  AM +F  + R +++ W  +I  H   GQ  +A+  FR+    G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           VR D     S++   +   LV +G Q + +  +   G+   + +   +VD++ + G  G 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDMYLKCGLTGE 361

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE------VDSENVGYYVLM 657
           A    + MP R   S W A++     HG+   G  A D LFE      V+++ V Y  L+
Sbjct: 362 AGRRFREMPARNVVS-WTAMINGVGKHGH---GREAID-LFEEMQEEGVEADEVAYLALL 416

Query: 658 S 658
           S
Sbjct: 417 S 417



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 191/418 (45%), Gaps = 20/418 (4%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H + V +G       +  LV  Y+       +R  FD I  RN+ TWNSMIS Y   G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFE--WDVF 179
           +  +++  F +       +PD +TF  +LKAC  L    +G ++H ++   G     +  
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           +A +LL +Y +     VA ++FD +  R++  W  +I G+ Q G   EA+ +       G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V  D   ++S++ V A    +  G  +H Y  K     ++ V+N+L++MY K G+   A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD---LLTLVSLTSIVA 356
           R F +M  R+VVSW ++I    +      A   F  MQ+ G++ D    L L+S  S   
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSG 423

Query: 357 QLNDCRN--SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            +++CR   SR      MR             +VD+  + G +  A  +   +P++  + 
Sbjct: 424 LVDECRRYFSRICQDRRMR-----PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 478

Query: 415 -WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR--QGIK 469
            W TL++    +   +   EV  ++   +  NP    YV +    +  G  R  QGI+
Sbjct: 479 VWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPV--NYVMLSNILAEAGEWRECQGIR 534


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/674 (35%), Positives = 382/674 (56%), Gaps = 6/674 (0%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++H + V  G    V+  T L+N YA +G +  +   FD +  +N  TW ++I+ Y + 
Sbjct: 134 QQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQI 193

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
           G+   A++ F +  L  G+RPD +     + AC  L     G++ H    ++  E D  V
Sbjct: 194 GQGGVALELFGKMGL-DGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASV 252

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ +YC+    ++ARKLFD M  R+  SW  MI+GY Q+    EA+ +  ++  EG 
Sbjct: 253 INALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGW 312

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D    ASIL  C     I  G  +H + +K  LE + +V N+LI+MYAK   +  A  
Sbjct: 313 QPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARA 372

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+ + E D +S+N++I  Y +  D   A   F+ M+   ++P  LT VSL  + +  + 
Sbjct: 373 VFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSA 432

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
              S+ +HG I++ G  + D+  G++++D+Y+K  ++  A AVF  +  +D++ WN +I 
Sbjct: 433 IELSKQIHGLIVKSGTSL-DLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIF 491

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G AQN    EA+++F  ++  + + PN+ T+V+++   S + ++  G + HA++IK    
Sbjct: 492 GLAQNEQGEEAVKLFNQLQ-VSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGAD 550

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            D  V+  L+DMY KCG I +   LF        + WN++IS +  HGQ ++AL  FR M
Sbjct: 551 SDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMM 610

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
              GV P+++TFV +L+AC+H+GLV EG R+F  M+ ++ I+P  +HY  +V+LFGR+G 
Sbjct: 611 GGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGK 670

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
           L  A  FI+ MP+ P A++W +LL AC + GN+E+G  A++     D  + G  VLMSNI
Sbjct: 671 LHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNI 730

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA+ G W    ++R      G+ K PG+S IEV  +V  F    R HP+ + IY  L  L
Sbjct: 731 YASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDEL 790

Query: 721 TAKMKSLGYVPDKS 734
           T+ +K+ GY+PD S
Sbjct: 791 TSILKNGGYLPDTS 804



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 174/590 (29%), Positives = 302/590 (51%), Gaps = 12/590 (2%)

Query: 53  LFQSCTKLHHVKRL----HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
           L  SC     + RL    HA  VV+G +  +F +  L+  Y+ LG +  +R  FD + ++
Sbjct: 16  LLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHK 75

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKAC---RNLVDGKK 164
           N+ +W S IS++ + G   +AV  F  F   SG   P+ +     L+AC   R +  G++
Sbjct: 76  NLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQ 135

Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
           +H   +++G + +V+V  +L+++Y + G  + A  +FD +PV++  +W A+I+GY Q G 
Sbjct: 136 VHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQ 195

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
              AL++  +M L+GV  D   +AS +  C+    +  G   H Y  +  +E +  V N 
Sbjct: 196 GGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINA 255

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI++Y K   +  A ++FD M  R++VSW ++IA Y Q++    A   F  + Q G QPD
Sbjct: 256 LIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPD 315

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           +    S+ +    L      R VH   ++      D  + N+++DMYAK   +  A AVF
Sbjct: 316 VFACASILNSCGSLAAIWQGRQVHAHAIKAN-LESDEYVKNSLIDMYAKCEHLTEARAVF 374

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           E L   D IS+N +I GY++ G  + AI+VF  M  C+ + P+  T+VS+L   S   A+
Sbjct: 375 EALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCS-LKPSPLTFVSLLGVSSSQSAI 433

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
               +IH  ++K+    D++  + L+D+Y K   ++DA ++F  +     V WNA+I   
Sbjct: 434 ELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGL 493

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             + QG++A+  F Q+   G+ P+  TFV+L+T  S    +  GQ+ FH    + G    
Sbjct: 494 AQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQ-FHAQIIKAGADSD 552

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
                 ++D++ + G +       ++  +  D   W +++     HG  E
Sbjct: 553 HHVSNALIDMYAKCGFIKEGRLLFES-TLGKDVICWNSMISTYAQHGQAE 601



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 8/211 (3%)

Query: 32  NSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN 91
           N LQ+S     NE   +    +  +   + H ++ HA ++ +G       S  L++ YA 
Sbjct: 507 NQLQVS-GLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAK 565

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            G +   R  F+    ++V  WNSMIS Y + G+  EA+  F     T G+ P++ TF  
Sbjct: 566 CGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGT-GVEPNYVTFVG 624

Query: 152 VLKACRN--LVDGKKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR 207
           VL AC +  LVD    H   +K  +  +      AS+++++ R G  + A++  + MP+ 
Sbjct: 625 VLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE 684

Query: 208 DSGS-WNAMISGYCQSGNAVEALDILDEMRL 237
            + + W +++S     GN VE      EM L
Sbjct: 685 PAAAVWRSLLSACHLFGN-VEIGRYATEMAL 714


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/713 (34%), Positives = 397/713 (55%), Gaps = 17/713 (2%)

Query: 70  LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
           ++VSG    V  +  L+  + NLG +  +   FD +   +  + N+MIS+Y   G  S+ 
Sbjct: 171 VIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSK- 229

Query: 130 VDCFYQFTLTS--GLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASL 184
             CF  F+     GLRPD  T   ++  C +      G  IH   L+   +  V V  +L
Sbjct: 230 --CFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINAL 287

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           ++MY   G  + A  LF +M  RD  SWN MIS Y Q+ N+ +AL  L ++       + 
Sbjct: 288 VNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNH 347

Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 304
           +T +S L  C+    ++ G ++H  +++  L+ NL V N+LI MY K   M  A +VF  
Sbjct: 348 LTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQS 407

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN- 363
           M   DVVS+N +I  Y    D   A   F+ ++ AGI+P+ +T++++       ND  N 
Sbjct: 408 MPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNY 467

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R +H +I+R G F+ D  + N+++ MYAK G + S+  +F  +  K+++SWN +I   A
Sbjct: 468 GRPLHAYIIRTG-FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANA 526

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
           Q G   EA+++F  M+       ++      L + + + +L +G+++H   +K+ L  D 
Sbjct: 527 QLGHGEEALKLFIDMQHAGN-KLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDS 585

Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP---WNAIISCHGIHGQGDKALNFFRQM 540
           +V    +DMYGKCG++++ + +   VP  +  P   WN +IS +  +G   +A   F+QM
Sbjct: 586 YVVNAAMDMYGKCGKMNEMLQM---VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQM 642

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGH 600
           +  G +PD++TFV+LL+ACSH+GLV +G  Y++ M   FG+ P +KH  C+VDL GR G 
Sbjct: 643 VAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGR 702

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNI 660
              A  FI+ MPV P+  IW +LL + R H N+E+G  A+ +L E+D  +   YVL+SN+
Sbjct: 703 FAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNL 762

Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
           YA   +W  VD++RS  +   + K P  S +++ N+V  F  G+R H   EKIY +L  +
Sbjct: 763 YATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEM 822

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
             K++ +GY+ D S  L D +E++KE  L +HSE+LA+A+G+I  P  S  Q+
Sbjct: 823 LLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGSTCQM 875



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 277/570 (48%), Gaps = 9/570 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HAL   +G +  V+  T L++ Y + G +S +R  F  +  RNV +W +++      G 
Sbjct: 66  IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGY 125

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
           L E +  + Q     G+  +   F  V+  C    N V G ++   V+  G +  V VA 
Sbjct: 126 LEETLRAYRQMR-REGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVAN 184

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           SL+ M+   G    A KLFD M   D+ S NAMIS Y   G   +   +  +MR  G+  
Sbjct: 185 SLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D  T+ S++ VCA +D+   G  IH   ++  L+ ++ V N L+NMY+  G +  A  +F
Sbjct: 245 DATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
             M  RD++SWN++I++Y Q+ +   A      +      P+ LT  S     +      
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALI 364

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
           + + VH  +++      ++++GN+++ MY K   +  A  VF+ +P  DV+S+N LI GY
Sbjct: 365 DGKMVHAIVLQLS-LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGY 423

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ-GIKIHARVIKNCLCF 481
           A     ++A++VF  +     I PN  T ++I  +++    L   G  +HA +I+     
Sbjct: 424 AVLEDGTKAMQVFSWIRSAG-IKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLS 482

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           D +VA  L+ MY KCG ++ + ++F  +   + V WNAII+ +   G G++AL  F  M 
Sbjct: 483 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQ 542

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
             G + D +     L++C+    + EG +  H +  + G+          +D++G+ G +
Sbjct: 543 HAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 601

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHG 631
                 + +  +RP    W  L+     +G
Sbjct: 602 NEMLQMVPDQAIRPQ-QCWNTLISGYAKYG 630



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 268/540 (49%), Gaps = 25/540 (4%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRP-----DFYTFPPVLKACR----- 157
           R   TW + +S  VRCGR   A      F L  G+R        +    ++ AC      
Sbjct: 4   RTPSTWYTAVSGCVRCGRDVAA------FELLRGMRERGVPLSGFALASLVTACERRGRD 57

Query: 158 -NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
             +  G  IH    + G   +V++  +LLH+Y   G+ + AR+LF +MP R+  SW A++
Sbjct: 58  EGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALM 117

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
                +G   E L    +MR EGV  +    A+++ +C   +N + GL +  +++  GL+
Sbjct: 118 VALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQ 177

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
             + V+N+LI M+   G ++ A ++FD+M E D +S N++I+ Y            F+ M
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           +  G++PD  TL SL S+ A  +   +   +H   +R       V + NA+V+MY+  G 
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSS-LDSSVTVINALVNMYSAAGK 296

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           ++ A  +F  +  +D+ISWNT+I+ Y QN  +++A++    +   NEI PN  T+ S L 
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEI-PNHLTFSSALG 355

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A S  GAL  G  +HA V++  L  ++ V   L+ MYGKC  ++DA  +F  +P    V 
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS 415

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           +N +I  + +   G KA+  F  +   G++P++IT +++  + + S  +    R  H   
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYI 475

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
              G          ++ ++ + G+L  + N   ++  +   S W A++ A     N +LG
Sbjct: 476 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS-WNAIIAA-----NAQLG 529



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 243/486 (50%), Gaps = 25/486 (5%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S     H   +H+L + S    +V     LVN Y+  G LS +   F ++S R++ +WN+
Sbjct: 258 SADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNT 317

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           MIS YV+    ++A+    Q   T+ + P+  TF   L AC +   L+DGK +H  VL+L
Sbjct: 318 MISSYVQNCNSTDALKTLGQLFHTNEI-PNHLTFSSALGACSSPGALIDGKMVHAIVLQL 376

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
             + ++ V  SL+ MY +      A K+F  MP  D  S+N +I GY    +  +A+ + 
Sbjct: 377 SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVF 436

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
             +R  G+  + IT+ +I      S+++ + G  +H YI++ G   + +V+N+LI MYAK
Sbjct: 437 SWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAK 496

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  +  +F+ +  +++VSWN+IIAA  Q      A   F  MQ AG + D + L   
Sbjct: 497 CGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAEC 556

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
            S  A L        +HG  M+ G    D  + NA +DMY K G +N    +     ++ 
Sbjct: 557 LSSCASLASLEEGMQLHGLGMKSG-LDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRP 615

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
              WNTLI+GYA+ G   EA E F+ M       P+  T+V++L A SH G + +GI  +
Sbjct: 616 QQCWNTLISGYAKYGYFKEAEETFKQMVAMGR-KPDYVTFVALLSACSHAGLVDKGIDYY 674

Query: 472 ARV---------IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
             +         IK+C+        C+VD+ G+ GR  +A     ++P   + + W +++
Sbjct: 675 NSMASSFGVSPGIKHCV--------CIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLL 726

Query: 522 SCHGIH 527
           S    H
Sbjct: 727 SSSRTH 732



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 215/464 (46%), Gaps = 11/464 (2%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC---ARSDNI 260
           MP R   +W   +SG  + G  V A ++L  MR  GV +    +AS++  C    R + I
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             G  IH    + GL  N+++   L+++Y   G++  A R+F +M ER+VVSW +++ A 
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
             +         +  M++ G+  +     ++ S+   L +      V   ++  G     
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSG-LQNQ 179

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           V + N+++ M+  LG +  A  +F+ +   D IS N +I+ Y+  G+ S+   VF  M  
Sbjct: 180 VSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRH 239

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
            + + P+  T  S++   +       G  IH+  +++ L   V V   LV+MY   G++ 
Sbjct: 240 -HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           DA  LF+ + R   + WN +IS +  +     AL    Q+      P+H+TF S L ACS
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
             G + +G +  H +  +  ++ +L     ++ ++G+   +  A    Q+MP   D   +
Sbjct: 359 SPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-DVVSY 416

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVG-YYVLMSNIYAN 663
             L+G   +   +E G  A      + S  +   Y+ M NI+ +
Sbjct: 417 NVLIGGYAV---LEDGTKAMQVFSWIRSAGIKPNYITMINIHGS 457


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/590 (36%), Positives = 349/590 (59%), Gaps = 11/590 (1%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M L G S       + +  C     +  G  +H  ++       +F+   L+ MY + G 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A  V D+M ER VVSW ++I+ Y Q+   + A   F  M +AG  P+  TL ++ + 
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            +        + VH  +++   F   + +G++++DMYAK   I  A  VF+ LP +DV+S
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTN-FESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVS 179

Query: 415 WNTLITGYAQNGLASEAIEVFQMM----EECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
              +I+GYAQ GL  EA+++F+ +     +CN +     T+ +++ A S + +L  G ++
Sbjct: 180 CTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHV-----TFTTLVTALSGLASLDYGKQV 234

Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
           HA +++  L F V +   L+DMY KCG++  +  +F  +   S V WNA++  +G HG G
Sbjct: 235 HALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLG 294

Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 590
            + ++ F+ +  E V+PD +T +++L+ CSH GLV EG   F  + +E     H  HYGC
Sbjct: 295 HEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGC 353

Query: 591 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 650
           ++DL GR+G L  A N I+NMP     SIWG+LLGACR+H N+ +G + + +L E++ EN
Sbjct: 354 IIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPEN 413

Query: 651 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 710
            G YV++SNIYA  G W+ V +VR L  ++ + K PG S I ++  +  F++  R HP  
Sbjct: 414 AGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSK 473

Query: 711 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           + I  +++ +   +K+ G+VPD S VL DV++++KE +L  HSE+LAI FG++++PP   
Sbjct: 474 KDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLT 533

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I++ KNLR+C DCHN+ KF+S++ EREI +RD NRFH    G C+CGDYW
Sbjct: 534 IRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 212/395 (53%), Gaps = 12/395 (3%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G    F+ +   + AC   R L +G+++H  ++   +   VF+   L+ MY R G  + A
Sbjct: 5   GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R + D MP R   SW  MISGY Q+   VEALD+  +M   G   +  T+A++L  C+  
Sbjct: 65  RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            +I  G  +H  +VK   E ++FV ++L++MYAK   ++ A RVFD + ERDVVS  +II
Sbjct: 125 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG-- 375
           + Y Q      A   F  +   G+Q + +T  +L + ++ L      + VH  I+R+   
Sbjct: 185 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 244

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +F   V + N+++DMY+K G +  +  VF+ +  + V+SWN ++ GY ++GL  E I +F
Sbjct: 245 FF---VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF 301

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYG 494
           + + +  E+ P+  T +++L   SH G + +G+ I   V+K            C++D+ G
Sbjct: 302 KDLHK--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 359

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHG 528
           + GR++ A++L   +P  S+   W +++    +H 
Sbjct: 360 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHA 394



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 215/431 (49%), Gaps = 30/431 (6%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++HA ++ +     VF  T+LV  Y   G L  +R+  D +  R+V +W +MIS Y + 
Sbjct: 30  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT 89

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFV 180
            R  EA+D F +  L +G  P+ YT   VL +C   +++  GK++H  ++K  FE  +FV
Sbjct: 90  ERHVEALDLFIKM-LRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 148

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SLL MY +      AR++FD +P RD  S  A+ISGY Q G   EALD+  ++  EG+
Sbjct: 149 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 208

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + +T  +++   +   ++  G  +H  I++  L F + + N+LI+MY+K G + ++ R
Sbjct: 209 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 268

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD M+ER VVSWN+++  Y +          F  + +  ++PD +TL      +A L+ 
Sbjct: 269 VFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL------LAVLSG 321

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNA-----------VVDMYAKLGIINSACAVFEGLPV 409
           C      HG ++  G  + D ++              ++D+  + G +  A  + E +P 
Sbjct: 322 CS-----HGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPF 376

Query: 410 KDVIS-WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           +   S W +L+     +        V Q + E      N G YV +   Y+  G  +   
Sbjct: 377 ESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEP--ENAGNYVILSNIYAAAGMWKDVF 434

Query: 469 KIHARVIKNCL 479
           K+   +++  +
Sbjct: 435 KVRKLMLEKTV 445



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 17/290 (5%)

Query: 40  CLENESREIDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           C+ NE        +  SC+    ++  K++H+LLV +     +F  + L++ YA   ++ 
Sbjct: 107 CIPNE---YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQ 163

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            +R  FD +  R+V +  ++IS Y + G   EA+D F Q   + G++ +  TF  ++ A 
Sbjct: 164 EARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL-YSEGMQCNHVTFTTLVTAL 222

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L     GK++H  +L+    + V +  SL+ MY + G    +R++FD+M  R   SWN
Sbjct: 223 SGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWN 282

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           AM+ GY + G   E + +  ++  E V  D +T+ ++L  C+    +  GL I   +VK 
Sbjct: 283 AMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE 341

Query: 274 GLEFNLFVSNN---LINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
             +  L  + +   +I++  + G +  AL + + M  E     W S++ A
Sbjct: 342 --QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 389


>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
 gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/436 (46%), Positives = 293/436 (67%), Gaps = 1/436 (0%)

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            A++  YAK G+I+ A  +F+GL  +D I WN +I GYAQ+GL +E + +F+ M    ++
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNA-KV 68

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN+ T +++L A    GAL  G  +H+ +  N +  +V V T L+DMY KCG ++DA  
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F ++     V WN+++  + +HG    AL  F++M   G +P  ITF+ +L ACSH+GL
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           VSEG ++F+ M++E+GI+P ++HYGCMV+L GRAG+L  A+  ++NM +  D  +WG LL
Sbjct: 189 VSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACR+HGN+ LG   ++ L   +  N G YVL+SNIYA  G WEGV  VR+L ++ G +K
Sbjct: 249 GACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEK 308

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG SSIEVNNKV  F  G+  HPK  +IY+ L  +   +K+ GY P    VL D+E+ +
Sbjct: 309 EPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQ 368

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           KE  L  HSE+LA+AFG+I++ P + I+I KNLRVC DCH  TK IS+IT R++++RD N
Sbjct: 369 KERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRN 428

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF +G+CSCGDYW
Sbjct: 429 RFHHFVNGLCSCGDYW 444



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 25/293 (8%)

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            +++  Y ++G+ + AR LFD +  RD+  WN MI GY Q G   E L +  +M    V 
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            + +TV ++L  C ++  + +G  +H YI  +G+  N+ V  +LI+MY+K G +  A  V
Sbjct: 70  PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129

Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F+++  +DVV+WNS++  Y        A   F  M   G QP  +T + +      LN C
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGV------LNAC 183

Query: 362 RNSRSVHGFIMRRGW----FMED-------VIIGNAVVDMYAKLGIINSACAVFEGLPV- 409
                 H  ++  GW     M+D       V     +V++  + G +  A  + + + + 
Sbjct: 184 S-----HAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +D + W TL+     +G  +   ++ + +   N    N GTYV +   Y+  G
Sbjct: 239 QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNL--ANSGTYVLLSNIYAAAG 289



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K++ S T ++  YA  G +  +R  FD +  R+   WN MI  Y + G  +E +  F Q 
Sbjct: 4   KSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQM 63

Query: 137 TLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            L + +RP+  T   VL AC     L  G+ +H  +   G   +V V  SL+ MY + G 
Sbjct: 64  -LNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGS 122

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              AR +F+ +  +D  +WN+M+ GY   G + +AL +  EM + G     IT   +L  
Sbjct: 123 LEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNA 182

Query: 254 CARSDNILSGLLIHLYIVK--HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
           C+ +  +  G     Y +K  +G+E  +     ++N+  + G +  A  +   M +++D 
Sbjct: 183 CSHAGLVSEGWKF-FYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDP 241

Query: 311 VSWNSIIAA 319
           V W +++ A
Sbjct: 242 VLWGTLLGA 250



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 32/242 (13%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +H+ +  +G    V   T L++ Y+  G L  +R  F+ IS ++V  WNSM+  Y   G 
Sbjct: 94  VHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGF 153

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
             +A+  F +  +  G +P   TF  VL AC         H  ++  G  W  F +    
Sbjct: 154 SQDALRLFKEMCMI-GYQPTDITFIGVLNACS--------HAGLVSEG--WKFFYS---- 198

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
            M   +G+                  +  M++   ++G   EA +++  M ++    DP+
Sbjct: 199 -MKDEYGIEPKVEH------------YGCMVNLLGRAGYLEEAYELVKNMEID---QDPV 242

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
              ++L  C    NI  G  I  Y+V   L  N      L N+YA  G      RV   M
Sbjct: 243 LWGTLLGACRLHGNIALGEQIAEYLVSQNLA-NSGTYVLLSNIYAAAGNWEGVARVRTLM 301

Query: 306 ME 307
            E
Sbjct: 302 KE 303


>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/603 (36%), Positives = 344/603 (57%), Gaps = 34/603 (5%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L +CAR  +  +   +H  I+K G + +  +SN L+++Y K G++  AL++FD+M  RD 
Sbjct: 10  LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VSW SI+ A+ ++  P        TM    G+QPD      +    + L   R  + VH 
Sbjct: 70  VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
             M   +F +D ++ ++++DMY K G  + A AVF+ +  K+ +SW ++I+GYA++G   
Sbjct: 130 RFML-SFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKC 188

Query: 430 EAIEVFQMMEECNE----------INPNQGTYV---------------------SILPAY 458
           EA+++F      N           I    G Y                      S++   
Sbjct: 189 EAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGC 248

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +++  L  G +IH  VI       +F++  LVDMY KC  I  A  +FY++PR   + W 
Sbjct: 249 ANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWT 308

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +II     HG+ ++AL  + +M+   ++P+ +TFV LL ACSH+GLVS G+  F  M  +
Sbjct: 309 SIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTD 368

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           + I P L+HY C++DL  R+GHL  A N +  +P +PD   W +LL AC  H N+E+G  
Sbjct: 369 YSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVR 428

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            +DR+ ++  E+   Y+L+SN+YA    W  V +VR L     ++K PG+SSI+      
Sbjct: 429 IADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQ 488

Query: 699 IFYTGNR-THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
           +F+ G    HP   +I + L++L A+M+  GYVP+ SFVL D+E+ EKE  L  HSERLA
Sbjct: 489 VFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLA 548

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +A+G++ + P + I+I KNLR+CGDCHN  KFIS I +REI+VRD+ R+HHFK+G CSC 
Sbjct: 549 VAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCN 608

Query: 818 DYW 820
           D+W
Sbjct: 609 DFW 611



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 209/429 (48%), Gaps = 39/429 (9%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  ++K GF+    ++ +LL +Y + GL   A +LFD+MP RD  SW ++++ + ++ 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 224 NAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
                L +L+ M   +G+  D    A I+  C+    +  G  +H   +      +  V 
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVK 143

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE--------------------- 321
           ++LI+MY K G    A  VFD ++ ++ VSW S+I+ Y                      
Sbjct: 144 SSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203

Query: 322 ----------QSNDPITAHGFFTTMQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
                     QS   I +   F  M++ GI   D L L S+    A L      + +HG 
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           ++  G F   + I NA+VDMYAK   I +A  +F  +P KDVISW ++I G AQ+G A E
Sbjct: 264 VIALG-FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEE 322

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCL 489
           A+ ++  M   + I PN+ T+V +L A SH G + +G ++   +  +  +   +   TCL
Sbjct: 323 ALTLYDEM-VLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCL 381

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           +D+  + G +D+A +L  ++P     P W +++S    H   +  +    ++LD  ++P+
Sbjct: 382 LDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLD--LKPE 439

Query: 549 HITFVSLLT 557
             +   LL+
Sbjct: 440 DPSTYILLS 448



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 196/430 (45%), Gaps = 38/430 (8%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LH+ ++ +G  K+   S  L++ Y   G +  +   FD +  R+  +W S+++ + +   
Sbjct: 25  LHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAA 182
               +          GL+PD + F  +++AC +L     GK++H   +   F  D  V +
Sbjct: 85  PRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKS 144

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL---------- 232
           SL+ MY + G  + AR +FD +  ++S SW +MISGY +SG   EA+D+           
Sbjct: 145 SLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFS 204

Query: 233 ---------------------DEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYI 270
                                +EMR EG+ + DP+ ++S++  CA    +  G  IH  +
Sbjct: 205 WTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLV 264

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  G E  LF+SN L++MYAK   +  A  +F +M  +DV+SW SII    Q      A 
Sbjct: 265 IALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEAL 324

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             +  M  + I+P+ +T V L    +        R +   +         +     ++D+
Sbjct: 325 TLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDL 384

Query: 391 YAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
            ++ G ++ A  + + +P K D  +W +L++   ++      + +   + +    +P+  
Sbjct: 385 LSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPS-- 442

Query: 450 TYVSILPAYS 459
           TY+ +   Y+
Sbjct: 443 TYILLSNVYA 452



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 41/333 (12%)

Query: 349 VSLTSIVAQLNDCRNSRS------VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           ++++  + QL  C   +S      +H  I++ G F +  ++ N ++D+Y K G+I  A  
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAG-FDKSSLLSNTLLDVYGKCGLIPQALQ 59

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ +P +D +SW +++T + +  +    + +   M   + + P+   +  I+ A S +G
Sbjct: 60  LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG 119

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD--------------------- 501
            LR G ++HAR + +  C D  V + L+DMY KCG+ DD                     
Sbjct: 120 YLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMIS 179

Query: 502 ----------AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR-PDHI 550
                     AM LF Q P  +   W A+IS     G G  + + F +M  EG+   D +
Sbjct: 180 GYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPL 239

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
              S++  C++  L+  G++  H +    G +  L     +VD++ +   +  A +    
Sbjct: 240 VLSSVVGGCANLALLELGKQ-IHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYR 298

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
           MP R D   W +++     HG  E      D +
Sbjct: 299 MP-RKDVISWTSIIVGTAQHGKAEEALTLYDEM 330



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 39/315 (12%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C+ L ++   K++HA  ++S         + L++ Y   G    +R  FD I 
Sbjct: 108 FACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSIL 167

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCF-------------------------YQFTLTSG 141
           ++N  +W SMIS Y R GR  EA+D F                         Y F+L + 
Sbjct: 168 FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227

Query: 142 LRP------DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           +R       D      V+  C NL     GK+IH  V+ LGFE  +F++ +L+ MY +  
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               A+ +F  MP +D  SW ++I G  Q G A EAL + DEM L  +  + +T   +L 
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLY 347

Query: 253 VCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            C+ +  +  G  L       + +  +L     L+++ ++ G +  A  + D++  + D 
Sbjct: 348 ACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDE 407

Query: 311 VSWNSIIAAYEQSND 325
            +W S+++A  + N+
Sbjct: 408 PTWASLLSACMRHNN 422


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 250/711 (35%), Positives = 405/711 (56%), Gaps = 18/711 (2%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
            +SPD       +  F  + ++C  L++V     +H      G    +F+ + L+  YA+
Sbjct: 107 NVSPD-------KYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYAD 159

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
            G +  +R  FD +  R+   WN M+  YV+ G    A+  F +   TS    +  T+  
Sbjct: 160 NGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMR-TSYSMVNSVTYTC 218

Query: 152 VLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
           +L  C    N   G ++H  V+  GFE+D  VA +L+ MY + G    ARKLF+ MP  D
Sbjct: 219 ILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTD 278

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           + +WN +I+GY Q+G   EA  + + M   GV  D +T AS LP    S ++     +H 
Sbjct: 279 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 338

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
           YIV+H + F++++ + LI++Y K G +  A ++F Q +  DV    ++I+ Y      I 
Sbjct: 339 YIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNID 398

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAV 387
           A   F  + Q G+  + LT+ S+    A +   +  + +H  I+++   +E+++ +G+A+
Sbjct: 399 AINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKR--LENIVNVGSAI 456

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
            DMYAK G ++ A   F  +  +D + WN++I+ ++QNG    AI++F+ M        +
Sbjct: 457 TDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGA-KFD 515

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             +  S L A +++ AL  G ++H  VI+N    D FVA+ L+DMY KCG +  A  +F 
Sbjct: 516 SVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFN 575

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
            +   + V WN+II+ +G HG   + L+ + +ML  G+ PDH+TF+ +++AC H+GLV E
Sbjct: 576 LMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDE 635

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G  YFH M  E+GI   ++HY CMVDL+GRAG +  A + I++MP  PDA +WG LLGAC
Sbjct: 636 GIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGAC 695

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           R+HGN+EL  +AS  L E+D +N GYYVL+SN++A+ G+W  V +VRSL +++G++K PG
Sbjct: 696 RLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPG 755

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
           +S I+VN    +F   +  HP+  +IY  L++L  +++  GYVP     L 
Sbjct: 756 YSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVPQPYLPLH 806



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 179/602 (29%), Positives = 315/602 (52%), Gaps = 17/602 (2%)

Query: 38  PDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD 94
           P+ L++ + +++   LF++C+    +   +++H  ++V G       S++++  Y   G 
Sbjct: 4   PETLDSLTTQLE--SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGR 61

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
              + + F  +  R    WN MI      G    A+  FY   L S + PD YTFP V+K
Sbjct: 62  FRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFAL-LFYFKMLGSNVSPDKYTFPYVIK 120

Query: 155 ACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 211
           AC  L +      +H +   LGF  D+F  ++L+ +Y   G    AR++FD++P+RD+  
Sbjct: 121 ACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTIL 180

Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           WN M+ GY +SG+   A+    EMR     ++ +T   IL +CA   N  +G  +H  ++
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
             G EF+  V+N L+ MY+K G + +A ++F+ M + D V+WN +IA Y Q+     A  
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR-RGWFMEDVIIGNAVVDM 390
            F  M  AG++PD +T  S    + +    R+ + VH +I+R R  F  DV + +A++D+
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF--DVYLKSALIDV 358

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           Y K G +  A  +F+   + DV     +I+GY  +GL  +AI  F+ + +   +  N  T
Sbjct: 359 YFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVT-NSLT 417

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
             S+LPA + V AL+ G ++H  ++K  L   V V + + DMY KCGR+D A   F ++ 
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
              SV WN++IS    +G+ + A++ FRQM   G + D ++  S L+A ++   +  G+ 
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKE 537

Query: 571 -YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRI 629
            + ++++  F     +     ++D++ + G+L +A      M  + + S W +++ A   
Sbjct: 538 MHGYVIRNAFSSDTFVA--STLIDMYSKCGNLALAWCVFNLMDGKNEVS-WNSIIAAYGN 594

Query: 630 HG 631
           HG
Sbjct: 595 HG 596


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/680 (34%), Positives = 383/680 (56%), Gaps = 10/680 (1%)

Query: 54  FQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD-HISYRN 109
            ++CT    L   K +H  +   G    +  S  L+ FY +  D + +   F  +    +
Sbjct: 10  LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLD 69

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIH 166
           V  WN+++S Y    R  EA+  F Q    S +RPDFYT+P VLKAC  L   + G++IH
Sbjct: 70  VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             +LK G  WDVFV +SL++MY +      A KLFD+ P RD G WNA+IS Y + G A 
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            AL   D+M+  G   + +T   ++  C R  N+  G  +H  +++  +  + FV + L+
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALV 249

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +MY K G +  A  VF+++  ++ ++WN++I  Y    D  +       M   G +P L+
Sbjct: 250 DMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLM 309

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           TL S+    ++    R+ + +HG+I+R    + D+ I  +++D Y K G ++SA  +F  
Sbjct: 310 TLTSIIYASSRSVQLRHGKFIHGYILRNRIDV-DIFIDVSLIDFYFKCGYVSSAETIFRT 368

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +   +V+SWN +I+G+   G   +A+ ++  M+E + + P+  T+ S L A S + AL +
Sbjct: 369 ISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKE-HHVKPDALTFSSTLSACSQLAALDK 427

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G ++H  +I + L  +  V   L+DMY KCG +D+A  LF+Q+P+   V W ++I  +G 
Sbjct: 428 GRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGS 487

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HGQ  +AL  F +M    VR D +TF+++L+ACSH+GLV EG  YF+ M  ++ IKP ++
Sbjct: 488 HGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIE 547

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQ-NMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           HY C++DL GRAG L  A+  +Q +   R D  +   L  AC +H N  LG      L E
Sbjct: 548 HYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIE 607

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           VD ++   Y+L+SN+YA+V KW+ V +VR   ++ GLKK+PG S IE+N ++  F+  ++
Sbjct: 608 VDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDK 667

Query: 706 THPKYEKIYDELRNLTAKMK 725
           ++P  + +Y+ L  L   M+
Sbjct: 668 SNPLADGVYECLNILGCHME 687



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 26/247 (10%)

Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY-- 507
           T +S L   +    L+QG  IH R+       ++ ++  L+  Y  C     A  +F   
Sbjct: 5   TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTN 64

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM-LDEGVRPDHITFVSLLTACSHSGLVS 566
             P   S+ WNA++S +  + +  +AL  F Q+  +  VRPD  T+  +L AC   G V 
Sbjct: 65  DCPLDVSL-WNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM---------AHNFIQNMPVRPDA 617
            G+R          I  HL   G + D+F  +  + M         A       P R D 
Sbjct: 124 YGRR----------IHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQR-DV 172

Query: 618 SIWGALLGACRIHGNMELGAVASDRLFEVDSE--NVGYYVLMSNIYANVGKWEGVDEVRS 675
             W A++      G  E+     D++ E+  E  +V + V++S+    +    G +  R 
Sbjct: 173 GCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRE 232

Query: 676 LARDRGL 682
           L   R L
Sbjct: 233 LIERRIL 239


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 247/682 (36%), Positives = 390/682 (57%), Gaps = 14/682 (2%)

Query: 67  HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
           H+L V  G I  V++   ++N Y    +L  +   FD +  R+  +WN+MI+ ++ CG L
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 127 SEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD-GKKIHCSVLKLGFEWDVFVAAS 183
             + D   +   + G   D YTF  +LK  A   +   G+++H  ++K+G+  +V+  ++
Sbjct: 81  EASWDVL-RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           LL MY +      A   F  +   ++ SWNAMI+GY Q+G+   A  +LD M  EG  +D
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199

Query: 244 PITVASILPVCARSD--NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
             T A +LP+   +D  N+ S L  H  I+KHGLE    + N LI  Y+K G +  A R+
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQL--HGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 302 FDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           FD     RD+V+WNS++AAY   +    A      MQ+ G +PDL +  S+ S     N 
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK--LGIINSACAVFEGLPVKDVISWNTL 418
             N RS+HG +++RG F + V I NA++ MY K   G +  A  +FE L  KD +SWN++
Sbjct: 318 SNNGRSLHGLVIKRG-FEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           +TG +Q G + +A++ F  M     ++ +  ++ ++L + S +   + G +IH   +K  
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSA-AMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
           L  + FV++ L+ MY KCG I+DA   F +  ++SS+ WNA++  +  HGQ + AL+ F 
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
            M  + V+ DHITFV++LTACSH GLV +G ++   M+ ++G+ P ++HY C VDL+GR+
Sbjct: 496 LMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRS 555

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G L  A   I+ MP +PD ++W   LGACR  GN+EL    +  L E++ E    YVL+S
Sbjct: 556 GRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLS 615

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+Y N+ +W+   +V+ L ++RG+KK PGWS IEVNN V  F   + +HP  ++IY  L 
Sbjct: 616 NMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLE 675

Query: 719 NLTAKMKSLGYVPD-KSFVLQD 739
            L  ++  +      KSF+ Q+
Sbjct: 676 VLLEEITRMEDADGFKSFLEQE 697



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 255/517 (49%), Gaps = 38/517 (7%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
            H  +++H++++  G  + V++ + L++ YA    L  +  +F  IS  N  +WN+MI+ 
Sbjct: 115 FHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMING 174

Query: 120 YVRCGRLSEA---VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-------KKIHCSV 169
           Y + G    A   +DC  Q     G + D  T+ P+L     L+D         ++H  +
Sbjct: 175 YAQAGDRETAFWLLDCMEQ----EGEKVDDGTYAPLLP----LLDDADFCNLTSQLHGKI 226

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVEA 228
           +K G E    +  +L+  Y + G  + A+++FD    +RD  +WN++++ Y        A
Sbjct: 227 IKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLA 286

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
             +L +M+  G   D  +  SI+  C   +   +G  +H  ++K G E ++ +SN LI+M
Sbjct: 287 FKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISM 346

Query: 289 YAK--FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           Y K  +G M+ AL +F+ +  +D VSWNSI+    Q+     A   F  M+ A +  D  
Sbjct: 347 YLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHY 406

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           +  ++    + L   +  + +H   ++ G    +  + ++++ MY+K GII  A   FE 
Sbjct: 407 SFSAVLRSCSDLATFQLGQQIHVLALKYG-LESNEFVSSSLIFMYSKCGIIEDARRSFEE 465

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
                 I+WN L+ GYAQ+G  + A+++F +ME   ++  +  T+V++L A SH+G + Q
Sbjct: 466 ASKNSSITWNALMFGYAQHGQCNVALDLFFLMEX-KKVKMDHITFVAVLTACSHIGLVEQ 524

Query: 467 GIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNA 519
           G K        C+  D  V        C VD+YG+ GR+++A +L  ++P +  +  W  
Sbjct: 525 GCK-----FLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKT 579

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRP-DHITFVSL 555
            +      G  + A      +L+  + P +H T+V L
Sbjct: 580 FLGACRSCGNIELACQVAGHLLE--MEPEEHCTYVLL 614



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 176/374 (47%), Gaps = 7/374 (1%)

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           LL H   VK G   +++  NN++N Y K   +R A  +FD+M  RD VSWN++IA +   
Sbjct: 18  LLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINC 77

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            +   +      M+  G + D  T  S+   +A        + VH  I++ G + E+V  
Sbjct: 78  GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMG-YAENVYA 136

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
           G+A++DMYAK   +  A   F  +   + +SWN +I GYAQ G    A  +   ME+  E
Sbjct: 137 GSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGE 196

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
              + GTY  +LP            ++H ++IK+ L     +   L+  Y KCG +DDA 
Sbjct: 197 -KVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAK 255

Query: 504 SLF-YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
            +F         V WN++++ + +  Q D A      M + G  PD  ++ S+++AC + 
Sbjct: 256 RIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNE 315

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA--GHLGMAHNFIQNMPVRPDASIW 620
            + + G R  H +  + G +  +     ++ ++ ++  G +  A    +++  +   S W
Sbjct: 316 NISNNG-RSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVS-W 373

Query: 621 GALLGACRIHGNME 634
            ++L      G+ E
Sbjct: 374 NSILTGLSQTGSSE 387



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 10/186 (5%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + +SC+ L   +   ++H L +  G     F S+ L+  Y+  G +  +R +F+  S
Sbjct: 408 FSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG-- 162
             +  TWN+++  Y + G+ + A+D F+       ++ D  TF  VL AC +  LV+   
Sbjct: 468 KNSSITWNALMFGYAQHGQCNVALDLFFLMEXKK-VKMDHITFVAVLTACSHIGLVEQGC 526

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 221
           K + C     G    +   A  + +Y R G    A+ L ++MP + D+  W   + G C+
Sbjct: 527 KFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFL-GACR 585

Query: 222 SGNAVE 227
           S   +E
Sbjct: 586 SCGNIE 591


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/788 (31%), Positives = 420/788 (53%), Gaps = 19/788 (2%)

Query: 47  EIDFDDLFQSCTKLHHVKRLHALLVVSGKIK-TVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           ++ +  +  +C     V  + A +   G ++  V  +T ++N Y   GDL  +   FD I
Sbjct: 141 DVTYVAVLGACGHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGI 200

Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDG 162
             R+   WN+MIS+ V   +  EA++ F Q  L  G+ P+  T    L AC   R+  + 
Sbjct: 201 LVRDAAVWNAMISLLVAHEQGDEALELFRQMRL-GGVTPNKGTCVAALNACCHSRDFSEA 259

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            +IH    +L  + D  V  +L++MY +FG  + A ++F+ +  RD  SWNAM++    +
Sbjct: 260 LRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACN 319

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL---EFNL 279
           G   +A     EM L G     IT  +IL  C  + ++  G  +    V+ G      ++
Sbjct: 320 GFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDV 379

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERD-----VVSWNSIIAAYEQSNDPITAHGFFT 334
            +   ++NMY++    + A      ++E+D     ++ WN++++ Y ++     A   F 
Sbjct: 380 VMGTAIMNMYSRCKSPKSAFSS-SLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFR 438

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M   G+  D ++L+++ +           + +H  ++          + NA+V MYA+L
Sbjct: 439 LMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHS-LLTESELTRKTPVQNALVTMYARL 497

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G +  A  +F+ +  ++VISW  ++  ++Q GL  EA+ +F+ +     + PN+ T+ ++
Sbjct: 498 GSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSIL-LEGVAPNEVTFTAV 556

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L A  ++ ++     + A + +     +V VA  L+   GKCG +++  + F  +   + 
Sbjct: 557 LNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQ 616

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V WN  I+ +  HG G + +  F+ M  EG+    +T + +L++CSH+GLV++G  YF  
Sbjct: 617 VSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLN 676

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI--WGALLGACRIHGN 632
           M  ++G     +HY C++DL  RAG L  A  F++ +P   D S+  W  LL  C++HG+
Sbjct: 677 MHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPF-GDQSVFPWITLLCGCKLHGD 735

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           +E G  A+ R+  ++  + G Y++M N+YA  GKW     VR    + G KK PG S IE
Sbjct: 736 LERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIE 795

Query: 693 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSH 752
           V  ++  F  G+ +HP+  +I+ EL  L  +MK  G+V D   V+ D++  EKE +L  H
Sbjct: 796 VKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQH 855

Query: 753 SERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDG 812
           SE+LAIAFG+IS+    P++I KNLRVC DCH+ TKFIS +  REI+VRD+ RFHHF+ G
Sbjct: 856 SEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGG 915

Query: 813 ICSCGDYW 820
            CSC D+W
Sbjct: 916 ACSCEDFW 923



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 242/505 (47%), Gaps = 27/505 (5%)

Query: 145 DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           D  TF  ++  C  L D   G++IH  +L+ G E   F+ A LL MYC+ G    AR +F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
             +  +   +W ++I    +SG+  EA  +  EM+L+GV  + +T  ++L  C     + 
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158

Query: 262 SGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA-- 318
           +   I   +   G LE ++ V+  ++N Y K G +  A  VFD ++ RD   WN++I+  
Sbjct: 159 T---IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLL 215

Query: 319 -AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            A+EQ ++ +     F  M+  G+ P+  T V+  +      D   +  +H F  R    
Sbjct: 216 VAHEQGDEALE---LFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAF-ARELAG 271

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 437
             D ++  A+V+MY K G ++ A  +FE +  +DV+SWN ++T  A NG   +A + F+ 
Sbjct: 272 DADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFRE 331

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL---CFDVFVATCLVDMYG 494
           M    E+ P++ TYV+IL A      L+ G  +    ++        DV + T +++MY 
Sbjct: 332 MLLVGEL-PSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYS 390

Query: 495 KCGRIDDAMSLFYQVPRSSSVP----WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           +C     A S    + +    P    WN ++S +  + Q ++A   FR ML  GV  D +
Sbjct: 391 RCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTV 450

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           + +++  AC  S  + +G ++ H +  E  +         +V ++ R G L  A      
Sbjct: 451 SLMTVFNACGSSASLEKG-KWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDA 509

Query: 611 MPVRPDASIWGALLGACRIHGNMEL 635
           M  R   S W A++G   +H  + L
Sbjct: 510 MTTRNVIS-WTAMVG---VHSQLGL 530



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 174/331 (52%), Gaps = 11/331 (3%)

Query: 233 DEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           DE++  +  S D  T A+++  CAR  ++  G  IH  I+++G+E   F+   L+ MY K
Sbjct: 28  DELKYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCK 87

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G    A  VF  + ++ VV+W S+I    +S  P  A   F  MQ  G+ P+ +T V++
Sbjct: 88  CGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAV 147

Query: 352 TSIVAQLNDCRNSRSVHGFIMRR---GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
                 L  C +   V     R    G    DVI+  AV++ Y K G ++SA  VF+G+ 
Sbjct: 148 ------LGACGHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGIL 201

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           V+D   WN +I+    +    EA+E+F+ M     + PN+GT V+ L A  H     + +
Sbjct: 202 VRDAAVWNAMISLLVAHEQGDEALELFRQM-RLGGVTPNKGTCVAALNACCHSRDFSEAL 260

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +IHA   +     D  V T LV+MYGK G++DDA  +F ++     V WNA+++ +  +G
Sbjct: 261 RIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNG 320

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
             DKA   FR+ML  G  P  IT+V++L AC
Sbjct: 321 FHDKAFKCFREMLLVGELPSRITYVAILNAC 351


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 212/574 (36%), Positives = 347/574 (60%), Gaps = 11/574 (1%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           +  C     +  G  +H ++VK      ++++  LI +Y + G +  A  V D M ER+V
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSW ++I+ Y QS     A   F  M +AG + +  TL ++ +        +    VH  
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           +++   F   + +G++++DMY K G I  A  VF+ LP +D +S   +I+GYAQ GL  E
Sbjct: 168 VVKTN-FESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDE 226

Query: 431 AIEVFQMM----EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           A+++F+ +     +CN +     T+ ++L + S + +L  G ++H  +++  L F + + 
Sbjct: 227 ALDLFRQLYSSGMQCNYV-----TFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQ 281

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
             L+DMY KCG++  +  +F  +P+ S++ WNA++  +G HG G + +  FR M +E V+
Sbjct: 282 NSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VK 340

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           PD +T +++L+ CSH GLV EG   F ++ +E     H+ HYGC++DL GR+G L  A +
Sbjct: 341 PDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALD 400

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I++MP  P  +IWG+LLGACR+H N+ +G V + +L +++  N G YV++SNIYA  G 
Sbjct: 401 LIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGM 460

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           W+ V  VR L  +  + K P  S I ++  +  F++  R HP+ + I  +++ +   +K+
Sbjct: 461 WKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKA 520

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            G+VPD S VL DV++++KE +L  HSE+LAI FG++++PP   IQ+ KNLR+C DCHN+
Sbjct: 521 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNF 580

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KF+S++  REI +RD NRFH  KDG C+CGDYW
Sbjct: 581 AKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 214/394 (54%), Gaps = 12/394 (3%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G    F+ +   + AC   + L +G+++H  ++K  +   V++A  L+ +Y R G  + A
Sbjct: 36  GADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDA 95

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           R + D MP R+  SW AMISGY QSG   EAL++   M   G   +  T+A++L  C   
Sbjct: 96  RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVH 155

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
            +I     +H  +VK   E ++FV ++L++MY K G ++ A +VFD + ERD VS  +II
Sbjct: 156 QSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAII 215

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR--G 375
           + Y Q      A   F  +  +G+Q + +T  +L + ++ L      + VHG I+R+   
Sbjct: 216 SGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELP 275

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           +F   +++ N+++DMY+K G +  +  VF+ +P +  ISWN ++ GY ++G+  E +++F
Sbjct: 276 FF---IVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLF 332

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYG 494
           + M E  E+ P+  T +++L   SH G + +G+ I   ++K       +    C++D+ G
Sbjct: 333 RTMTE--EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLG 390

Query: 495 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
           + G++  A+ L   +P   +   W +++    +H
Sbjct: 391 RSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVH 424



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 242/469 (51%), Gaps = 39/469 (8%)

Query: 30  AANSLQISPDCLENESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLV 86
           AA+SL +       ++R  D+D    +C +   L   +++HA +V +     V+ +T+L+
Sbjct: 28  AASSLAVPG----ADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLI 83

Query: 87  NFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF 146
             Y   G L  +R+  D +  RNV +W +MIS Y + GR +EA++ F +  L +G + + 
Sbjct: 84  ILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRM-LRAGCKANE 142

Query: 147 YTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
           +T   VL +C   +++   +++H  V+K  FE  +FV +SLL MY + G    ARK+FD 
Sbjct: 143 FTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDM 202

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           +P RD+ S  A+ISGY Q G   EALD+  ++   G+  + +T  ++L   +   ++  G
Sbjct: 203 LPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYG 262

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +H  I++  L F + + N+LI+MY+K G + ++ RVFD M +R  +SWN+++  Y + 
Sbjct: 263 KQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRH 322

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                    F TM +  ++PD +TL+++      L+ C      HG ++  G  + D+I+
Sbjct: 323 GIGQEVVQLFRTMTEE-VKPDSVTLLAV------LSGCS-----HGGLVDEGLDIFDLIV 370

Query: 384 GNA-----------VVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNGLASEA 431
                         V+D+  + G +  A  + E +P +   + W +L+ G  +  +    
Sbjct: 371 KEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLL-GACRVHINVSV 429

Query: 432 IEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            EV  + ++  ++ P N G YV +   Y+  G  +   ++   +++N +
Sbjct: 430 GEV--VAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTV 476


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/690 (34%), Positives = 384/690 (55%), Gaps = 17/690 (2%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L ++C     + +LH+  +  G     F  TKL   YA    L  +   F+    + VY 
Sbjct: 10  LLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYL 69

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTL--TSGLRPDFYTFPPVLKACRNLVD---GKKIHC 167
           WN+++  Y   G+  E +  F+Q      +  RPD YT    LK+C  L     GK IH 
Sbjct: 70  WNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHG 129

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            + K   + D+FV ++L+ +Y + G  N A K+F + P +D   W ++I+GY Q+G+   
Sbjct: 130 FLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPEL 189

Query: 228 ALDILDEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           AL     M  LE VS DP+T+ S    CA+  +   G  +H ++ + G +  L ++N+++
Sbjct: 190 ALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSIL 249

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           N+Y K G +R A  +F +M  +D++SW+S++A Y  +     A   F  M    I+ + +
Sbjct: 250 NLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRV 309

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T++S     A  ++    + +H   +  G F  D+ +  A++DMY K     +A  +F  
Sbjct: 310 TVISALRACASSSNLEEGKHIHKLAVNYG-FELDITVSTALMDMYMKCFSPKNAIDLFNR 368

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN----PNQGTYVSILPAYSHVG 462
           +P KDV+SW  L +GYA+ G+A +++ VF     CN ++    P+    V IL A S +G
Sbjct: 369 MPKKDVVSWAVLFSGYAEIGMAHKSLGVF-----CNMLSYGTRPDAIALVKILAASSELG 423

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            ++Q + +HA V K+    + F+   L+++Y KC  ID+A  +F  + R   V W++II+
Sbjct: 424 IVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIA 483

Query: 523 CHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
            +G HGQG++AL  F QM +   V+P+ +TFVS+L+ACSH+GL+ EG + FH+M  E+ +
Sbjct: 484 AYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQL 543

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
            P+ +HYG MVDL GR G L  A + I  MP++    +WGALLGACRIH N+++G +A+ 
Sbjct: 544 MPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAAL 603

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            LF +D  + GYY L+SNIY     W    ++R+L ++   KK  G S +E+ N+V  F 
Sbjct: 604 NLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFI 663

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
             +R H + ++IY  LR L A+MK  GY P
Sbjct: 664 ASDRFHGESDQIYGMLRKLDARMKEEGYDP 693


>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Cucumis sativus]
          Length = 614

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/554 (41%), Positives = 334/554 (60%), Gaps = 36/554 (6%)

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG--IQPDLLTLVSLTSIVAQ 357
           ++ DQ  +  + + NS+I AY +S  P  +  F+  + Q+   + PD  T   L    AQ
Sbjct: 64  QILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ 123

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS------------------ 399
            + C    +VHG +++ G F  D  + + ++ MYA++  ++S                  
Sbjct: 124 -SACEAGPAVHGALIKHG-FEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTT 181

Query: 400 ---ACA----------VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
              ACA          +F+ +P +D +SWN +I GYAQ G + EA+ +F++M+  + +  
Sbjct: 182 MVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQ-MDGVKV 240

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N+ + +S++ A +H+GAL QG   HA + KN +   V + T LVDMY KCG +D A+ +F
Sbjct: 241 NEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVF 300

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
           +++   +   W+  I    ++G G K L  F  M  EG+ P+ ITF+S+L  CS  G V 
Sbjct: 301 WEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVD 360

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           EG+ +F  M+ + GI+P L+HYGCMVDL+GRAG L  A NFI  MP++P A  WGALL A
Sbjct: 361 EGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNA 420

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           CR++ NMELG  AS +L EV+ +N G YV +SNIYA+ G W+ V  VR   +  G+ K P
Sbjct: 421 CRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLP 480

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S +EVN +V  F++G+++HP Y+ I      ++ ++K  GYV   + VL D+EE+EKE
Sbjct: 481 GCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKE 540

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
             L  HSE++AIAFG+ S     PI+I KNLR+C DCH+ +K IS+I EREIIVRD NRF
Sbjct: 541 DALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRF 600

Query: 807 HHFKDGICSCGDYW 820
           HHFKDG CSC D+W
Sbjct: 601 HHFKDGECSCKDFW 614



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 203/455 (44%), Gaps = 55/455 (12%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L  S   L  +K++H  LV++G +       + V   A  N  +L +S    D  +   +
Sbjct: 15  LIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTL 74

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSG--LRPDFYTFPPVLKACRNLV--DGKKIH 166
           +  NSMI  Y +     ++   FY   L S   + PD YTF  +++ C       G  +H
Sbjct: 75  FALNSMIRAYSKSLTPHKSFQ-FYNKILQSNDVMSPDNYTFNFLVRTCAQSACEAGPAVH 133

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRF-------------------------------GLAN 195
            +++K GFE+D  V + L+ MY                                  G   
Sbjct: 134 GALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIG 193

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR LFD MP RD  SWNAMI+GY Q G + EAL++   M+++GV ++ +++ S++  C 
Sbjct: 194 FARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACT 253

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G   H YI K+ ++  + +   L++MY K G +  AL+VF +M E++V +W++
Sbjct: 254 HLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWST 313

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL---TSIVAQLNDCRNSRSVHGFIM 372
            I     +         F+ M+  GI P+ +T +S+    S+V  +++ R+    H   M
Sbjct: 314 AIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRS----HFDSM 369

Query: 373 RRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGL 427
           +R   +E  +     +VD+Y + G +  A      +P+K    +W  L+     Y    L
Sbjct: 370 KRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMEL 429

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
              A      +E       N G YVS+   Y+  G
Sbjct: 430 GEFASRKLIEVE-----GKNHGAYVSLSNIYADTG 459



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 211/477 (44%), Gaps = 57/477 (11%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYI 270
           N+MI  Y +S    ++    +++      M P   T   ++  CA+S    +G  +H  +
Sbjct: 78  NSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQSA-CEAGPAVHGAL 136

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRV----------------------------- 301
           +KHG E++  V + LI MYA+   +    RV                             
Sbjct: 137 IKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFAR 196

Query: 302 --FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
             FD M +RD VSWN++IA Y Q      A   F  MQ  G++ + ++++S+ +    L 
Sbjct: 197 NLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLG 256

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                +  H +I +    M  V +G A+VDMY K G ++ A  VF  +  K+V +W+T I
Sbjct: 257 ALDQGKWAHAYIEKNKIQM-TVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAI 315

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
            G A NG   + +E+F  M+    I PN+ T++S+L   S VG + +G + H   +K   
Sbjct: 316 GGLAMNGYGQKCLELFSFMKH-EGIAPNEITFISVLKGCSVVGFVDEG-RSHFDSMKRDH 373

Query: 480 CFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNF 536
             +  +    C+VD+YG+ GR+++A++    +P +  +  W A+++   ++   +    F
Sbjct: 374 GIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELG-EF 432

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
             + L E    +H  +VSL    + +G           M+ E GI    K  GC V    
Sbjct: 433 ASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAE-GIS---KLPGCSVMEVN 488

Query: 597 RAGHLGMAHNFIQNMPVRPD----ASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
                G  H F       P      ++WG +    ++ G +   A  +  LF+++ E
Sbjct: 489 -----GEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYV---ASTNSVLFDIEEE 537


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/526 (41%), Positives = 324/526 (61%), Gaps = 5/526 (0%)

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPD-LLTLVSLTSI 354
           A  +FD+M  RD  SW++I++A+ +   P  A   +  M  +  G   D   T  S  + 
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAA 171

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
                  R  R +H  ++RRG    D ++ +A+ DMYAK G ++ A +VF+ +PV+DV+S
Sbjct: 172 ATAARCARAGRELHCHVVRRG-IDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVS 230

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           W  ++  Y   G   E   +F  M     I PN+ TY  +L A +   + + G ++H R+
Sbjct: 231 WTAMLDRYFDAGRDGEGFRLFVRMMRSG-ILPNEFTYAGVLRACAEFTSEKLGKQVHGRM 289

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
            K+      F  + LV MY K G +  AM +F  +P+   V W A+IS +  +GQ D+AL
Sbjct: 290 AKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEAL 349

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           + F  +L  G RPDH+TFV +L+AC+H+GLV +G   FH +++++GI+    HY C++DL
Sbjct: 350 HCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDL 409

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
             R+G    A + I  MPV+P+  +W +LLG CRIH N+ L   A++ LFE++ EN   Y
Sbjct: 410 LSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATY 469

Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
           V ++NIYA+VG ++ V+ +R     RG+ K P  S IEV  +V +F  G+++HP+ E+IY
Sbjct: 470 VTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIY 529

Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
             L+ L  KM+  GYV D  FVL DVE+++K+  +  HSERLA+AFGII++P  SPI++F
Sbjct: 530 ALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVF 589

Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           KNLR+CGDCH   K IS+I +REIIVRDSNRFHHFK+G CSC DYW
Sbjct: 590 KNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 178/378 (47%), Gaps = 16/378 (4%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT---SGLRPDFYTFPP 151
           L+ +R  FD +  R+ ++W++++S +VR G+   A+  + +       SG   +F     
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168

Query: 152 VLKACRNLVD--GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           +  A        G+++HC V++ G + D  V ++L  MY +FG  + AR +FD MPVRD 
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AM+  Y  +G   E   +   M   G+  +  T A +L  CA   +   G  +H  
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           + K     + F  + L++MY+K+G M  A+RVF  M + D+VSW ++I+ Y Q+  P  A
Sbjct: 289 MAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEA 348

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              F  +  +G +PD +T V + S  A          +   I  +            V+D
Sbjct: 349 LHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVID 408

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEIN 445
           + ++ G+   A  +   +PVK +   W +L+ G   +    LA  A E         EI 
Sbjct: 409 LLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEAL------FEIE 462

Query: 446 P-NQGTYVSILPAYSHVG 462
           P N  TYV++   Y+ VG
Sbjct: 463 PENPATYVTLANIYASVG 480



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 6/261 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LH  +V  G        + L + YA  G L  +R  FD +  R+V +W +M+  Y   
Sbjct: 182 RELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDA 241

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
           GR  E    F +  + SG+ P+ +T+  VL+AC        GK++H  + K       F 
Sbjct: 242 GRDGEGFRLFVRM-MRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA 300

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+HMY ++G    A ++F  MP  D  SW AMISGY Q+G   EAL   D +   G 
Sbjct: 301 GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF 360

Query: 241 SMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             D +T   +L  CA +  +  GL + H    K+G+E        +I++ ++ G+   A 
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAE 420

Query: 300 RVFDQM-MERDVVSWNSIIAA 319
            + + M ++ +   W S++  
Sbjct: 421 DMINTMPVKPNKFLWASLLGG 441



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K++H  +  S    + F+ + LV+ Y+  GD+  +   F  +   ++ +W +MIS Y + 
Sbjct: 283 KQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQN 342

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVL-KLGFEWDVF 179
           G+  EA+ CF    L+SG RPD  TF  VL AC +  LVD G  I  S+  K G E    
Sbjct: 343 GQPDEALHCF-DMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTAD 401

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
             A ++ +  R GL   A  + + MPV+ +    A + G C+
Sbjct: 402 HYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCR 443


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/533 (40%), Positives = 320/533 (60%), Gaps = 3/533 (0%)

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MY K G +  A  VFD+M  RDVVSW  +IA Y Q+  P  A G    M +A  +P+  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             SL         C     +H   ++  W  EDV +G+A++DMYA+   ++ A  VF+ L
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNW-DEDVYVGSALLDMYARCEQMDMAIMVFDRL 119

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             K+ +SWN LI G+A+       +  F  M+  N       TY S+  A++ +GAL QG
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQR-NGFGATHFTYSSMFSAFARIGALEQG 178

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +HA +IK+      FV   ++ MY K G + DA  +F ++ +   V WN +++    +
Sbjct: 179 RWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 238

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +A+  F ++   G++ + ITF+S+LTACSH GLV EG+ YF MM++ + ++P + H
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDH 297

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y   VDL GRAG L  A  F+  MP+ P A++WGALLGACR+H N ++G  A+D +FE+D
Sbjct: 298 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELD 357

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            ++ G  VL+ NIYA+ GKW     VR + +  G+KK P  S +++ N V +F   + TH
Sbjct: 358 PDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTH 417

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           PK   IY     +  ++K  GYVP+ + VL  + E E+E  L  HSE++A+AF +I+ P 
Sbjct: 418 PKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPA 477

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + I+I KN+R+CGDCH+  K++S++ +REI+VRD+NRFHHF +G CSCGDYW
Sbjct: 478 GASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 180/342 (52%), Gaps = 3/342 (0%)

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           MYC+ G  + AR +FD MP RD  SW  +I+GY Q+    EA+ +L +M       +  T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
             S+L           G  +H   VK+  + +++V + L++MYA+   M  A+ VFD+++
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
            ++ VSWN++IA + +  D  T    F  MQ+ G      T  S+ S  A++      R 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH  +++ G  +    +GN ++ MYAK G +  A  VF+ +  +D+++WNT++T  AQ G
Sbjct: 181 VHAHLIKSGQKLT-AFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 239

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           L  EA+  F+ + +C  I  NQ T++S+L A SH G +++G      +    +  ++   
Sbjct: 240 LGKEAVAHFEEIRKCG-IQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHY 298

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
              VD+ G+ G + +A+   +++P   ++  W A++    +H
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 172/336 (51%), Gaps = 8/336 (2%)

Query: 89  YANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           Y   G +S +RH FD +  R+V +W  +I+ Y +    +EA+       L +  RP+ +T
Sbjct: 2   YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDM-LRARFRPNGFT 60

Query: 149 FPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           F  +LKA   C     G+++H   +K  ++ DV+V ++LL MY R    ++A  +FD + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            ++  SWNA+I+G+ +  +    L    EM+  G      T +S+    AR   +  G  
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H +++K G +   FV N ++ MYAK G M  A +VFD+M +RD+V+WN+++ A  Q   
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  +++ GIQ + +T +S+ +  +     +  +  H F M + + ++  I   
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--HYFDMMKDYNVQPEIDHY 298

Query: 386 -AVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLI 419
            + VD+  + G++  A      +P++   + W  L+
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 334



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 140/302 (46%), Gaps = 18/302 (5%)

Query: 31  ANSLQISPDCLENESRE--IDFDDLFQS---CTKLHHVKRLHALLVVSGKIKTVFSSTKL 85
           A ++ + PD L    R     F  L ++   C      +++HAL V     + V+  + L
Sbjct: 40  AEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSAL 99

Query: 86  VNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
           ++ YA    +  +   FD +  +N  +WN++I+ + R       +  F +    +G    
Sbjct: 100 LDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQ-RNGFGAT 158

Query: 146 FYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
            +T+  +  A      L  G+ +H  ++K G +   FV  ++L MY + G    ARK+FD
Sbjct: 159 HFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFD 218

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            M  RD  +WN M++   Q G   EA+   +E+R  G+ ++ IT  S+L  C+    +  
Sbjct: 219 RMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKE 278

Query: 263 GL----LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL-RVFDQMMERDVVSWNSII 317
           G     ++  Y V+   E + +VS   +++  + G+++ AL  VF   ME     W +++
Sbjct: 279 GKHYFDMMKDYNVQP--EIDHYVS--FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 334

Query: 318 AA 319
            A
Sbjct: 335 GA 336



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F     L   + +HA L+ SG+  T F    ++  YA  G +  +R  FD +  R++ TW
Sbjct: 169 FARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTW 228

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK 171
           N+M++   + G   EAV  F +     G++ +  TF  VL AC +  LV   K +  ++K
Sbjct: 229 NTMLTALAQYGLGKEAVAHFEEIR-KCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMK 287

Query: 172 ---LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
              +  E D +V  S + +  R GL   A      MP+  + + W A++ G C+
Sbjct: 288 DYNVQPEIDHYV--SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL-GACR 338


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/659 (35%), Positives = 372/659 (56%), Gaps = 4/659 (0%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K+IH S++      D F+   LL     F     +  LF      +   +N++I+G+  +
Sbjct: 30  KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               E LD+   +R  G+ +   T   +L  C R+ +   G+ +H  +VK G   ++   
Sbjct: 90  HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L+++Y+  G +  A ++FD++ +R VV+W ++ + Y  S     A   F  M + G++
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD   +V + S    + D  +   +  + M      ++  +   +V++YAK G +  A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKY-MEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 461
           VF+ +  KD+++W+T+I GYA N    E IE+F QM++E   + P+Q + V  L + + +
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE--NLKPDQFSIVGFLSSCASL 326

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL  G    + + ++    ++F+A  L+DMY KCG +     +F ++     V  NA I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S    +G    +   F Q    G+ PD  TF+ LL  C H+GL+ +G R+F+ +   + +
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           K  ++HYGCMVDL+GRAG L  A+  I +MP+RP+A +WGALL  CR+  + +L      
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L  ++  N G YV +SNIY+  G+W+   EVR +   +G+KK PG+S IE+  KV  F 
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
             +++HP  +KIY +L +L  +M+ +G+VP   FV  DVEE+EKE +L  HSE+LA+A G
Sbjct: 567 ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALG 626

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IS+     I++ KNLRVCGDCH   K IS+IT REI+VRD+NRFH F +G CSC DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/472 (31%), Positives = 236/472 (50%), Gaps = 9/472 (1%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           +CT ++H+K++H  L+        F    L+          +S   F H  + N++ +NS
Sbjct: 23  ACT-VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNS 81

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
           +I+ +V      E +D F       GL    +TFP VLKAC        G  +H  V+K 
Sbjct: 82  LINGFVNNHLFHETLDLFLSIR-KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
           GF  DV    SLL +Y   G  N A KLFD++P R   +W A+ SGY  SG   EA+D+ 
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
            +M   GV  D   +  +L  C    ++ SG  I  Y+ +  ++ N FV   L+N+YAK 
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260

Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
           G M  A  VFD M+E+D+V+W+++I  Y  ++ P      F  M Q  ++PD  ++V   
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
           S  A L            I R   F+ ++ + NA++DMYAK G +     VF+ +  KD+
Sbjct: 321 SSCASLGALDLGEWGISLIDRHE-FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IH 471
           +  N  I+G A+NG    +  VF   E+   I+P+  T++ +L    H G ++ G++  +
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
           A      L   V    C+VD++G+ G +DDA  L   +P R +++ W A++S
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/594 (38%), Positives = 341/594 (57%), Gaps = 42/594 (7%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H  +++ GL+ + ++ N ++     FG   ++ R+F Q  E ++  +N++I     ++ 
Sbjct: 29  VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDS 88

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              +   + +M++ G+ PD  T   L    A+L D +    +HG +++ G    D  +  
Sbjct: 89  FQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGC-ESDAFVNT 147

Query: 386 AVVDMYAKLGIINSA--------------------------------------CAVFEGL 407
           ++V +Y K G I++A                                      C+VF+G+
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
             KD++SW+++I GYA NGL  EA+++F +M+ E     P+    V +L A + +GAL  
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNE--GFRPDCYAMVGVLCACARLGALEL 265

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G      + +N    +  + T L+DMY KCGR+D A  +F  + +   V WNA IS   +
Sbjct: 266 GNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAM 325

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
            G    A   F QM   G+ PD  TFV LL AC+H+GLV EG++YF+ M+  F + P ++
Sbjct: 326 SGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIE 385

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HYGCMVDL GRAG L  AH  +++MP+  +A +WGALLG CR+H + +L      +L  +
Sbjct: 386 HYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIAL 445

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           +  N G YVL+SNIY+   KWE   ++RS+  +RG+KK PG+S IEV+  V  F  G+ +
Sbjct: 446 EPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTS 505

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           HP  EKIY +L  L   +K+ GYVP   +VL D+EE+EKEH +  HSE+LAIAFG+IS+ 
Sbjct: 506 HPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLISTA 565

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P   I++ KNLRVCGDCH   K IS+ T REIIVRD+NRFH F DG CSC DYW
Sbjct: 566 PNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 204/463 (44%), Gaps = 47/463 (10%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           LFQ    L H+K +HA L+  G  +  +   K++ F  N G+ ++S   F      N++ 
Sbjct: 16  LFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFL 75

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSV 169
           +N+MI   V      E+++ ++      GL PD +TFP +LKAC  L+D K   K+H  V
Sbjct: 76  FNTMIHGLVLNDSFQESIEIYHSMR-KEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLV 134

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS------------ 217
           +K G E D FV  SL+ +Y + G  + A K+FDD+P ++  +W A+IS            
Sbjct: 135 VKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAI 194

Query: 218 --------------------------GYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
                                     GY  +G   EALD+  +M  EG   D   +  +L
Sbjct: 195 DMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVL 254

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
             CAR   +  G      + ++    N  +   LI+MYAK G M  A  VF  M ++D+V
Sbjct: 255 CACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIV 314

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
            WN+ I+    S     A G F  M+++GI+PD  T V L             R     +
Sbjct: 315 VWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSM 374

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASE 430
            R      ++     +VD+  + G ++ A  + + +P++ + I W  L+ G     L  +
Sbjct: 375 ERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCR---LHRD 431

Query: 431 AIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKIHA 472
              V  ++++   + P N G YV +   YS         KI +
Sbjct: 432 TQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRS 474



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 140/316 (44%), Gaps = 44/316 (13%)

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
            N  ++ + VH  ++R G   ED  + N V+      G  N +  +F      ++  +NT
Sbjct: 20  FNSLKHLKHVHAALLRLG-LDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNT 78

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I G   N    E+IE++  M +   ++P+  T+  +L A + +   + GIK+H  V+K 
Sbjct: 79  MIHGLVLNDSFQESIEIYHSMRK-EGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKA 137

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS--------------- 522
               D FV T LV +YGKCG ID+A  +F  +P  +   W AIIS               
Sbjct: 138 GCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMF 197

Query: 523 ---CHGIHGQGDK--------------------ALNFFRQMLDEGVRPDHITFVSLLTAC 559
              C    G  +K                    AL+ F +ML+EG RPD    V +L AC
Sbjct: 198 RRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCAC 257

Query: 560 SHSGLVSEGQRYFHMM-QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           +  G +  G    ++M + EF   P L     ++D++ + G +  A    + M  + D  
Sbjct: 258 ARLGALELGNWASNLMDRNEFLGNPVLGT--ALIDMYAKCGRMDSAWEVFRGMR-KKDIV 314

Query: 619 IWGALLGACRIHGNME 634
           +W A +    + G+++
Sbjct: 315 VWNAAISGLAMSGHVK 330



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 166/452 (36%), Gaps = 94/452 (20%)

Query: 36  ISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANL 92
           +SPD          F  L ++C +L   K   +LH L+V +G     F +T LV+ Y   
Sbjct: 104 LSPD-------SFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKC 156

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------------- 136
           G +  +   FD I  +NV  W ++IS Y+  G+  EA+D F +                 
Sbjct: 157 GFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWS 216

Query: 137 ---------------------TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG-- 173
                                 L  G RPD Y    VL AC  L          L+LG  
Sbjct: 217 SMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARL--------GALELGNW 268

Query: 174 ---------FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
                    F  +  +  +L+ MY + G  + A ++F  M  +D   WNA ISG   SG+
Sbjct: 269 ASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGH 328

Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS-- 282
              A  +  +M   G+  D  T   +L  C  +  +  G     Y       F L     
Sbjct: 329 VKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEG---RQYFNSMERVFTLTPEIE 385

Query: 283 --NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
               ++++  + G +  A ++   M ME + + W +++       D     G     Q  
Sbjct: 386 HYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLK--QLI 443

Query: 340 GIQP-DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG--------WFMEDVIIGNAVV-- 388
            ++P +    V L++I +  +   ++  +   +  RG        W   D ++   +V  
Sbjct: 444 ALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGD 503

Query: 389 -------DMYAKLGIINSACAVFEGLPVKDVI 413
                   +YAKLG +         +P  D +
Sbjct: 504 TSHPLSEKIYAKLGELVKDLKASGYVPTTDYV 535


>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/603 (36%), Positives = 343/603 (56%), Gaps = 34/603 (5%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L +CAR  +  +   +H  I+K G + +  +SN L+++Y K G++  AL++FD+M  RD 
Sbjct: 10  LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
           VSW SI+ A+ ++  P        TM    G+QPD      +    + L   R  + VH 
Sbjct: 70  VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
             M    F +D ++ ++++DMY K G  + A AVF+ +  K+ +SW ++I+GYA++G   
Sbjct: 130 RFML-SXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKC 188

Query: 430 EAIEVFQMMEECNE----------INPNQGTYV---------------------SILPAY 458
           EA+++F      N           I    G Y                      S++   
Sbjct: 189 EAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGC 248

Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
           +++  L  G +IH  VI       +F++  LVDMY KC  I  A  +FY++PR   + W 
Sbjct: 249 ANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWT 308

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           +II     HG+ ++AL  + +M+   ++P+ +TFV LL ACSH+GLVS G+  F  M  +
Sbjct: 309 SIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTD 368

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           + I P L+HY C++DL  R+GHL  A N +  +P +PD   W +LL AC  H N+E+G  
Sbjct: 369 YSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVR 428

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
            +DR+ ++  E+   Y+L+SN+YA    W  V +VR L     ++K PG+SSI+      
Sbjct: 429 IADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQ 488

Query: 699 IFYTGNRT-HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
           +F+ G    HP   +I + L++L A+M+  GYVP+ SFVL D+E+ EKE  L  HSERLA
Sbjct: 489 VFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLA 548

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           +A+G++ + P + I+I KNLR+CGDCHN  KFIS I +REI+VRD+ R+HHFK+G CSC 
Sbjct: 549 VAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCN 608

Query: 818 DYW 820
           D+W
Sbjct: 609 DFW 611



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 209/429 (48%), Gaps = 39/429 (9%)

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  ++K GF+    ++ +LL +Y + GL   A +LFD+MP RD  SW ++++ + ++ 
Sbjct: 24  ELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKAL 83

Query: 224 NAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
                L +L+ M   +G+  D    A I+  C+    +  G  +H   +      +  V 
Sbjct: 84  IPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVK 143

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE--------------------- 321
           ++LI+MY K G    A  VFD ++ ++ VSW S+I+ Y                      
Sbjct: 144 SSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF 203

Query: 322 ----------QSNDPITAHGFFTTMQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
                     QS   I +   F  M++ GI   D L L S+    A L      + +HG 
Sbjct: 204 SWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGL 263

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
           ++  G F   + I NA+VDMYAK   I +A  +F  +P KDVISW ++I G AQ+G A E
Sbjct: 264 VIALG-FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEE 322

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCL 489
           A+ ++  M   + I PN+ T+V +L A SH G + +G ++   +  +  +   +   TCL
Sbjct: 323 ALTLYDEM-VLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCL 381

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           +D+  + G +D+A +L  ++P     P W +++S    H   +  +    ++LD  ++P+
Sbjct: 382 LDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLD--LKPE 439

Query: 549 HITFVSLLT 557
             +   LL+
Sbjct: 440 DPSTYILLS 448



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 196/430 (45%), Gaps = 38/430 (8%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LH+ ++ +G  K+   S  L++ Y   G +  +   FD +  R+  +W S+++ + +   
Sbjct: 25  LHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDHVSWASILTAHNKALI 84

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAA 182
               +          GL+PD + F  +++AC +L     GK++H   +   F  D  V +
Sbjct: 85  PRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKS 144

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL---------- 232
           SL+ MY + G  + AR +FD +  ++S SW +MISGY +SG   EA+D+           
Sbjct: 145 SLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFS 204

Query: 233 ---------------------DEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYI 270
                                +EMR EG+ + DP+ ++S++  CA    +  G  IH  +
Sbjct: 205 WTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLV 264

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  G E  LF+SN L++MYAK   +  A  +F +M  +DV+SW SII    Q      A 
Sbjct: 265 IALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEAL 324

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             +  M  + I+P+ +T V L    +        R +   +         +     ++D+
Sbjct: 325 TLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDL 384

Query: 391 YAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
            ++ G ++ A  + + +P K D  +W +L++   ++      + +   + +    +P+  
Sbjct: 385 LSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPS-- 442

Query: 450 TYVSILPAYS 459
           TY+ +   Y+
Sbjct: 443 TYILLSNVYA 452



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 149/333 (44%), Gaps = 41/333 (12%)

Query: 349 VSLTSIVAQLNDCRNSRS------VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           ++++  + QL  C   +S      +H  I++ G F +  ++ N ++D+Y K G+I  A  
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAG-FDKSSLLSNTLLDVYGKCGLIPQALQ 59

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           +F+ +P +D +SW +++T + +  +    + +   M   + + P+   +  I+ A S +G
Sbjct: 60  LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLG 119

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID---------------------- 500
            LR G ++HAR + +  C D  V + L+DMY KCG+ D                      
Sbjct: 120 YLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMIS 179

Query: 501 ---------DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR-PDHI 550
                    +AM LF Q P  +   W A+IS     G G  + + F +M  EG+   D +
Sbjct: 180 GYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPL 239

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
              S++  C++  L+  G++  H +    G +  L     +VD++ +   +  A +    
Sbjct: 240 VLSSVVGGCANLALLELGKQ-IHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYR 298

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
           MP R D   W +++     HG  E      D +
Sbjct: 299 MP-RKDVISWTSIIVGTAQHGKAEEALTLYDEM 330



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 146/315 (46%), Gaps = 39/315 (12%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  + ++C+ L ++   K++HA  ++S         + L++ Y   G    +R  FD I 
Sbjct: 108 FACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSIL 167

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCF-------------------------YQFTLTSG 141
           ++N  +W SMIS Y R GR  EA+D F                         Y F+L + 
Sbjct: 168 FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNE 227

Query: 142 LRP------DFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
           +R       D      V+  C NL     GK+IH  V+ LGFE  +F++ +L+ MY +  
Sbjct: 228 MRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 287

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               A+ +F  MP +D  SW ++I G  Q G A EAL + DEM L  +  + +T   +L 
Sbjct: 288 DILAAKDIFYRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLY 347

Query: 253 VCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            C+ +  +  G  L       + +  +L     L+++ ++ G +  A  + D++  + D 
Sbjct: 348 ACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDE 407

Query: 311 VSWNSIIAAYEQSND 325
            +W S+++A  + N+
Sbjct: 408 PTWASLLSACMRHNN 422


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/675 (36%), Positives = 370/675 (54%), Gaps = 15/675 (2%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L  G ++H +++KLGF  D  +  +L+ MY + G  ++A ++FD MP R+  SW A++ 
Sbjct: 19  SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 78

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G+   G A E L +  EMR  G S +  T+++ L  C       +G+ IH   V+ G E 
Sbjct: 79  GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEG 136

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V+N+L+ MY+K      A RVFD +  R++ +WNS+I+ Y  +     +   F  MQ
Sbjct: 137 HDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 196

Query: 338 QA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF-MEDVIIGNAVVDMYAKLG 395
           +    QPD  T  SL    + L   R    VH  +  RG     + I+  A++D+Y K  
Sbjct: 197 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCH 256

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            +  A  VF+GL  ++ I W T+I G+AQ G   EA+ +F+       +  +     S++
Sbjct: 257 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG-VRADGHVLSSVV 315

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
             ++    + QG ++H    K     DV VA  LVDMY KCG   +A   F ++P  + V
Sbjct: 316 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 375

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A+I+  G HG G +A++ F +M  EGV  D + +++LL+ACSHSGLV E +RYF  +
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 435

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
            ++  ++P  +HY CMVDL GRAG L  A   I +MP+ P   +W  LL ACR+H ++ +
Sbjct: 436 CQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAV 495

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G    D L  VD +N   YV++SNI A  G+W     +R   R +GL+K  G S  EV+ 
Sbjct: 496 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 555

Query: 696 KVDIFY-TGNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSFVLQDVEEDEKEHILTSHS 753
           +V  FY  G+  HP+   I   LR + A+M+  LGY  D    L DV+E+ +   L  HS
Sbjct: 556 EVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHS 615

Query: 754 ERLAIAFGIISSPPKSP--------IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           ERLA+   ++               ++++KNLRVCGDCH + K +S +  R ++VRD+NR
Sbjct: 616 ERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANR 675

Query: 806 FHHFKDGICSCGDYW 820
           FH F++G CSC DYW
Sbjct: 676 FHRFQNGACSCRDYW 690



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 229/474 (48%), Gaps = 19/474 (4%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LHA L+  G       +  L++ YA  G L  +   FD +  RNV +W +++  ++  G
Sbjct: 25  QLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHG 84

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-GKKIHCSVLKLGFEWDVFVAAS 183
              E +  F +    SG  P+ +T    LKAC      G +IH   ++ GFE    VA S
Sbjct: 85  EARECLRLFGEMR-GSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGHDVVANS 143

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSM 242
           L+ MY +      AR++FD +P R+  +WN+MISGY  +G   ++L +  EM R      
Sbjct: 144 LVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQP 203

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLE--FNLFVSNNLINMYAKFGMMRHALR 300
           D  T AS+L  C+       G  +H  +   G+    N  ++  L+++Y K   +  A++
Sbjct: 204 DEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQ 263

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VFD +  R+ + W ++I  + Q      A   F     +G++ D   L S+ ++ A    
Sbjct: 264 VFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFAL 323

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
               + VH +  +    + DV + N++VDMY K G+   A   F  +P ++V+SW  +I 
Sbjct: 324 VEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMIN 382

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G  ++G   EAI++F+ M +   +  ++  Y+++L A SH G + +  +  +R+     C
Sbjct: 383 GVGKHGHGREAIDLFEEM-QAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI-----C 436

Query: 481 FDVFVA------TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIH 527
            D  +        C+VD+ G+ G + +A  L   +P   +V  W  ++S   +H
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVH 490



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 220/421 (52%), Gaps = 19/421 (4%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A +L   AR  ++  G+ +H  ++K G   +  ++NNLI+MYAK G +  A  VFD M 
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ER+VVSW +++  +    +       F  M+ +G  P+  TL +  ++ A     R    
Sbjct: 67  ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSA--TLKACGGGTRAGVQ 124

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG  +R G+   DV + N++V MY+K      A  VF+ +P +++ +WN++I+GYA  G
Sbjct: 125 IHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL--CFDVF 484
              +++ VF+ M+  ++  P++ T+ S+L A S +GA R+G ++HA +    +    +  
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           +A  L+D+Y KC R+  AM +F  + R +++ W  +I  H   GQ  +A+  FR+    G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 545 VRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGM 603
           VR D     S++   +   LV +G Q + +  +   G+   + +   +VD++ + G  G 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDMYLKCGLTGE 361

Query: 604 AHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE------VDSENVGYYVLM 657
           A    + MP R   S W A++     HG+   G  A D LFE      V+++ V Y  L+
Sbjct: 362 AGRRFREMPARNVVS-WTAMINGVGKHGH---GREAID-LFEEMQAEGVEADEVAYLALL 416

Query: 658 S 658
           S
Sbjct: 417 S 417



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 20/418 (4%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H + V +G       +  LV  Y+       +R  FD I  RN+ TWNSMIS Y   G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFE--WDVF 179
           +  +++  F +       +PD +TF  +LKAC  L    +G ++H ++   G     +  
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           +A +LL +Y +     VA ++FD +  R++  W  +I G+ Q G   EA+ +       G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V  D   ++S++ V A    +  G  +H Y  K     ++ V+N+L++MY K G+   A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD---LLTLVSLTSIVA 356
           R F +M  R+VVSW ++I    +      A   F  MQ  G++ D    L L+S  S   
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 423

Query: 357 QLNDCRN--SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            +++CR   SR      MR             +VD+  + G +  A  +   +P++  + 
Sbjct: 424 LVDECRRYFSRICQDRRMR-----PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 478

Query: 415 -WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR--QGIK 469
            W TL++    +   +   EV  ++   +  NP    YV +    +  G  R  QGI+
Sbjct: 479 VWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPV--NYVMLSNILAEAGEWRECQGIR 534


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/678 (35%), Positives = 373/678 (55%), Gaps = 16/678 (2%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L  G ++H ++ K+GF  D  +  +L+ MY + G  ++A ++F  M  R+  SW A++ 
Sbjct: 19  SLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMV 78

Query: 218 GYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           G+ + G+A   L +L EMR     + +  T+++ L  C    +  +G+ IH   V+ G +
Sbjct: 79  GFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQ 138

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
            +  V+++L+ +Y+K G +  A RVFD   +   + +WN++++ Y  +     A   F  
Sbjct: 139 EHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFRE 198

Query: 336 MQ--QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYA 392
           M+  +   QPD  T  SL    + L   R    VH  +   G+    + I+  A+VDMY 
Sbjct: 199 MRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYV 258

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K   +  A  VFE L  K+VI W  ++ G+AQ G  +EA+E+F+         P+     
Sbjct: 259 KCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSG-ARPDSHVLS 317

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
           S++   +    + QG ++H   IK+    DV     +VDMY KCG  D+A  +F ++   
Sbjct: 318 SVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAP 377

Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYF 572
           + V W  +++  G HG G +A+  F +M   GV PD +T+++LL+ACSH+GLV E +RYF
Sbjct: 378 NVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYF 437

Query: 573 HMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
             ++ +  ++P  +HY CMVDL GRAG L  A + I+ MP+ P   +W  LL ACR+H +
Sbjct: 438 SCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 497

Query: 633 MELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
           + +G  A D L  +D +N   YV +SN+ A  G+W    +VR   R RGLKK  G S +E
Sbjct: 498 VAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVE 557

Query: 693 VNNKVDIFYTGN---RTHPKYEKIYDELRNLTAKMKS-LGY-VPDKSFVLQDVEEDEKEH 747
           V  +V  FY G     THP+   I   LR++  +M+  LGY   D  F L DV+E+ +  
Sbjct: 558 VGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFALHDVDEESRAE 617

Query: 748 ILTSHSERLAIAF-----GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRD 802
            L +HSERLA+       G+       PI+++KNLRVCGDCH + K +S +  R ++VRD
Sbjct: 618 SLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRD 677

Query: 803 SNRFHHFKDGICSCGDYW 820
           +NRFH F+ G CSC DYW
Sbjct: 678 ANRFHRFEHGSCSCKDYW 695



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 256/544 (47%), Gaps = 33/544 (6%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           +LH  +   G          L++ Y   G+L  +   F  +  RNV +W +++  ++R G
Sbjct: 25  QLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHG 84

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
             +  +    +    S   P+ YT    LKAC  + D   G  IH   ++ G++    VA
Sbjct: 85  DATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVA 144

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDS-GSWNAMISGYCQSGNAVEALDILDEMRL-EG 239
           +SL+ +Y + G    AR++FD   +     +WNAM+SGY  +G+  +AL +  EMR  EG
Sbjct: 145 SSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEG 204

Query: 240 VSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEF--NLFVSNNLINMYAKFGMMR 296
               D  T AS+L  C+       G  +H  +   G     N  ++  L++MY K   + 
Sbjct: 205 QHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLP 264

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A++VF+++  ++V+ W +++  + Q      A   F    ++G +PD   L S+  ++A
Sbjct: 265 VAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLA 324

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                   R VH + ++      DV  GN++VDMY K G+ + A  +F  +   +V+SW 
Sbjct: 325 DFALVEQGRQVHCYGIKDP-TGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWT 383

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           T++ G  ++GL  EA+ +F+ M     + P++ TY+++L A SH G + +      R   
Sbjct: 384 TMVNGLGKHGLGREAVALFEEM-RAGGVEPDEVTYLALLSACSHAGLVDE-----CRRYF 437

Query: 477 NCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQ 529
           +C+  D  V        C+VD+ G+ G + +A  L   +P   +V  W  ++S   +H  
Sbjct: 438 SCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKD 497

Query: 530 ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
              G +A +    M  +G  P  + +V+L    + +G   E  +    M+   G+K   K
Sbjct: 498 VAVGREAGDVLLAM--DGDNP--VNYVTLSNVLAEAGEWRECHKVRDAMRRR-GLK---K 549

Query: 587 HYGC 590
             GC
Sbjct: 550 QGGC 553



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 207/427 (48%), Gaps = 26/427 (6%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +A +L   ARS ++  G+ +H  I K G   +  + NNLI+MY K G +  A  VF  M 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSR 365
           +R+VVSW +++  + +  D          M+ A    P+  TL +       + D     
Sbjct: 67  DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQ 424
            +HG  +R G+   DV + +++V +Y+K G I  A  VF+G  +   + +WN +++GYA 
Sbjct: 127 GIHGLCVRAGYQEHDV-VASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAH 185

Query: 425 NGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL--CF 481
            G   +A+ VF +M     +  P++ T+ S+L A S +GA R+G ++HA +  +      
Sbjct: 186 AGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTAS 245

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +  +A  LVDMY KC R+  AM +F ++ R + + W A++  H   GQ  +AL  FR+  
Sbjct: 246 NAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFW 305

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK----PHLKHYGCMVDLFGR 597
             G RPD     S++   +   LV +G R  H     +GIK      +     +VD++ +
Sbjct: 306 RSGARPDSHVLSSVVGVLADFALVEQG-RQVHC----YGIKDPTGTDVSAGNSIVDMYLK 360

Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE------VDSENV 651
            G    A    + M   P+   W  ++     HG +   AVA   LFE      V+ + V
Sbjct: 361 CGLPDEAERMFREMRA-PNVVSWTTMVNGLGKHG-LGREAVA---LFEEMRAGGVEPDEV 415

Query: 652 GYYVLMS 658
            Y  L+S
Sbjct: 416 TYLALLS 422



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 2/179 (1%)

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
            Q     +L A +   +LR G+++H  + K     D  +   L+DMY KCG +D A  +F
Sbjct: 3   RQKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF 62

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLV 565
             +   + V W A++     HG     L    +M       P+  T  + L AC   G  
Sbjct: 63  GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDT 122

Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           + G    H +    G + H      +V ++ + G +G A        +    + W A++
Sbjct: 123 AAGV-GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMV 180


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/603 (36%), Positives = 357/603 (59%), Gaps = 63/603 (10%)

Query: 280 FVSNNLINMYAKFGMMRHALRVFD-------------------------------QMMER 308
           FVSN+LI+MY + G+   A R FD                               Q   R
Sbjct: 143 FVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVR 202

Query: 309 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
           DV+SW S+IAAY ++N    A G F TM   GI PD +T++++ S  A+L D    RS+H
Sbjct: 203 DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLH 262

Query: 369 GFIMRRGW-FMEDVIIG------------------------------NAVVDMYAKLGII 397
             +  +G    E++++                               NA++D Y K G +
Sbjct: 263 LLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHV 322

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
           + A ++F+ + V+D+I++N+++TGY  +G   EA+ +F  M   +++  +  T V++L A
Sbjct: 323 DVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRR-HDLRVDNFTVVNLLTA 381

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            + +GAL+QG  +HA + +  +  D+++ T L+DMY KCGR+D+A  +F ++ +     W
Sbjct: 382 CASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTW 441

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
            A+I+    +G G  AL  F QM  +G +P+ ++++++LTACSHS L++EG+ YF  M+ 
Sbjct: 442 TAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRI 501

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            + I P ++HYGCM+DL GR+G L  A + ++ MP++P+A IW ++L ACR+H +++L  
Sbjct: 502 LYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQ 561

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
            A++ L +++ +  G YV + NIY +  +WE   ++R L  +R +KKT G+SSI V  +V
Sbjct: 562 CAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQV 621

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F   +++HP+  +I   L  ++ ++KSLGY P  S +  DV+E+EKE  L +HSE+LA
Sbjct: 622 HKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLA 681

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAFG+I+  P  P+ I KNLRVC DCH+  K IS++  REIIVRD +RFHHF++G CSC 
Sbjct: 682 IAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCN 741

Query: 818 DYW 820
           D+W
Sbjct: 742 DFW 744


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/604 (38%), Positives = 348/604 (57%), Gaps = 50/604 (8%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           IH   +K G+  N  + N +++     +FG M +A ++FD + E  V SWN +   Y + 
Sbjct: 33  IHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRI 92

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSL-----TSIVAQL-------------------- 358
             P      +  M +  ++PD  T   L      S+  QL                    
Sbjct: 93  ACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAH 152

Query: 359 NDCRNSRSVHGFI-MRRGWF---------------------MEDVIIGNAVVDMYAKLGI 396
           N   N  S+ G I M RG F                      +DVI   A+V  +   G 
Sbjct: 153 NALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQ 212

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +++A   F  +P +D +SW  +I GY +     EA+ +F+ M+  ++I P++ T VS+L 
Sbjct: 213 VDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQT-SKIKPDEFTMVSVLT 271

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A + +GAL  G  I   + KN +  D FV   L+DMY KCG ++ A+S+F  +P+     
Sbjct: 272 ACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFT 331

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W A++    I+G G++ALN F QML   V PD +T+V +L+AC+H+G+V EG+++F  M 
Sbjct: 332 WTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMT 391

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
              GI+P++ HYGCMVDL G+AGHL  AH  I+NMP++P++ +WGALLGACRIH + E+ 
Sbjct: 392 ARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMA 451

Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
             A +++ E++  N   YVL  NIYA   KW+ + E+R +  DRG+KKTPG S IE+N  
Sbjct: 452 ERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGI 511

Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
           V  F  G+++HP+ ++IY +L  +T+ +K  GY P+ S V  D+ E++KE+ +  HSE+L
Sbjct: 512 VHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKL 571

Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
           AIAFG+I+S P   I+I KNLR+C DCH+  K +S++ +RE+IVRD  RFHHF+ G CSC
Sbjct: 572 AIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSC 631

Query: 817 GDYW 820
            DYW
Sbjct: 632 KDYW 635



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 205/447 (45%), Gaps = 56/447 (12%)

Query: 150 PPV--LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC--RFGLANVARKLFDDMP 205
           PP+   + C+++   K+IH   +K G   +  +   +L   C   FG    AR+LFD +P
Sbjct: 16  PPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIP 75

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
                SWN M  GY +       + +  EM    V  D  T   +     RS  +  G  
Sbjct: 76  EPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRE 135

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H ++VK+GL+ N+F  N LINMY+  G++  A  +FD   + DVV+WN++I+ Y +   
Sbjct: 136 LHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKK 195

Query: 326 PITA-----HGF-------------------------------------------FTTMQ 337
            + +      GF                                           F  MQ
Sbjct: 196 DVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQ 255

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
            + I+PD  T+VS+ +  AQL        +  +I  +     D  +GNA++DMY K G +
Sbjct: 256 TSKIKPDEFTMVSVLTACAQLGALELGEWIRTYI-DKNKVKNDTFVGNALIDMYFKCGNV 314

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
             A ++F  LP +D  +W  ++ G A NG   EA+ +F  M + + + P++ TYV +L A
Sbjct: 315 EMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKAS-VTPDEVTYVGVLSA 373

Query: 458 YSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
            +H G + +G K  A +  ++ +  ++    C+VD+ GK G + +A  +   +P + +S+
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSI 433

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLD 542
            W A++    IH   + A     Q+L+
Sbjct: 434 VWGALLGACRIHKDAEMAERAIEQILE 460



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 206/454 (45%), Gaps = 62/454 (13%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNV 110
           LF++C  ++H+K++H+  + +G I       K+++F  +   GD+ ++R  FD I   +V
Sbjct: 20  LFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSV 79

Query: 111 YTWNSMISVYVR--CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKI 165
           ++WN M   Y R  C +L  ++   Y   L   ++PD YT+P + K     V    G+++
Sbjct: 80  FSWNIMFKGYSRIACPKLGVSL---YLEMLERNVKPDCYTYPFLFKGFTRSVALQLGREL 136

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD----------------------- 202
           HC V+K G + +VF   +L++MY   GL ++AR +FD                       
Sbjct: 137 HCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKD 196

Query: 203 -------------------------DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
                                     MP RD  SW AMI GY +     EAL +  EM+ 
Sbjct: 197 VISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQT 256

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
             +  D  T+ S+L  CA+   +  G  I  YI K+ ++ + FV N LI+MY K G +  
Sbjct: 257 SKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEM 316

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           AL +F+ + +RD  +W +++     +     A   F+ M +A + PD +T V + S    
Sbjct: 317 ALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTH 376

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWN 416
                  +     +  R     ++     +VD+  K G +  A  + + +P+K + I W 
Sbjct: 377 TGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWG 436

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
            L+ G  +    +E  E  + +E+  E+ PN G 
Sbjct: 437 ALL-GACRIHKDAEMAE--RAIEQILELEPNNGA 467



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 182/415 (43%), Gaps = 21/415 (5%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K V S T +V  + N G +  +R  F  +  R+  +W +MI  Y+R     EA+  F + 
Sbjct: 195 KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM 254

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
             TS ++PD +T   VL AC  L     G+ I   + K   + D FV  +L+ MY + G 
Sbjct: 255 Q-TSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGN 313

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
             +A  +F+ +P RD  +W AM+ G   +G   EAL++  +M    V+ D +T   +L  
Sbjct: 314 VEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSA 373

Query: 254 CARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVV 311
           C  +  +  G         +HG+E N+     ++++  K G ++ A  +   M M+ + +
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSI 433

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT-SIVAQLNDCRNSRSVHGF 370
            W +++ A     D   A      + +  ++P+   +  L  +I A  N     R +   
Sbjct: 434 VWGALLGACRIHKDAEMAERAIEQILE--LEPNNGAVYVLQCNIYAACNKWDKLRELRQV 491

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI--SWNTLITGYAQNGLA 428
           +M RG        G ++++M    GI++   A  +  P    I    N + +     G +
Sbjct: 492 MMDRGI---KKTPGCSLIEMN---GIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYS 545

Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFD 482
               EVF  + E ++ N        +  A+   G +  G  +  R++KN  +C D
Sbjct: 546 PNTSEVFLDIAEEDKENAVYRHSEKLAIAF---GLINSGPGVTIRIVKNLRMCID 597


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/607 (38%), Positives = 350/607 (57%), Gaps = 43/607 (7%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L +C +    L+   IH  IVK GL     + N L++ Y K  +++ A  +FD+M +RD 
Sbjct: 9   LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68

Query: 311 VSWNSIIAAYEQSNDPITA----HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           VSW SI+ AY Q+  P       H  FTT +   +QPD     +L    A L   R  + 
Sbjct: 69  VSWASILTAYNQAKLPNKTLSIFHYMFTTDR---LQPDHFVYATLLKACASLCSLRLGKQ 125

Query: 367 VHG-FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
           VH  F++    F++D ++ +++VDMYAK G+ + A +VF+ + VK  +SW  +++GYA++
Sbjct: 126 VHARFVLSP--FVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARS 183

Query: 426 GLASEAIEVF--------------------------------QMMEECNEINPNQGTYVS 453
           GL  EA+E+F                                +M  E  +I  +     S
Sbjct: 184 GLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDI-VDPLVLSS 242

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           ++ A +++  L  G +IH  VI +     +F++  LVDMY KC  I  A ++F ++    
Sbjct: 243 VVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRD 302

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V W +II     HG+  +AL+ + QM+   ++P+ +TFV L+ ACSH+GLVS+G++ F 
Sbjct: 303 VVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFK 362

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            M E++ I P L+ + C +DL  R+GHL  A + I+ MP +PD   W ALL AC+ HGN 
Sbjct: 363 AMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNT 422

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           E+G   +DRL  ++      YVL+SN+YA  GKWE +  VR L  D  +K+ PG+SSI++
Sbjct: 423 EMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDL 482

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
             +  +F+ G   HP  ++I+  L+ L A+M+  GY+PD S+VL D+EE EKE  L  HS
Sbjct: 483 GKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHS 542

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           ER A+A+G++ + P + I+I KNLR+CGDCH + K  S I  +EIIVRD+ R+HHFKDG 
Sbjct: 543 ERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGR 602

Query: 814 CSCGDYW 820
           CSC D+W
Sbjct: 603 CSCNDFW 609



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 41/449 (9%)

Query: 57  CTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           CTK     + K++HA +V SG  +       L++ Y     L  + + FD +  R+  +W
Sbjct: 12  CTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSW 71

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVL 170
            S+++ Y +    ++ +  F+    T  L+PD + +  +LKAC +L     GK++H   +
Sbjct: 72  ASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFV 131

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
              F  D  V +SL+ MY + GL ++AR +FD + V+ S SW AM+SGY +SG   EA++
Sbjct: 132 LSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAME 191

Query: 231 IL-------------------------------DEMRLEGVSM-DPITVASILPVCARSD 258
           +                                 EMR EGV + DP+ ++S++  CA   
Sbjct: 192 LFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLA 251

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  IH  ++  G E  LF+SN L++MYAK   +  A  VF++M+ RDVVSW SII 
Sbjct: 252 VLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIV 311

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
              Q      A   +  M  A I+P+ +T V L    +        R +   ++      
Sbjct: 312 GAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRIS 371

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM 437
             + +    +D+ ++ G +N A  + + +P K D  +W  L++    +G     + +   
Sbjct: 372 PSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADR 431

Query: 438 MEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +   N   P+  TYV +   Y+  G   Q
Sbjct: 432 LLSLNMHEPS--TYVLLSNVYAGAGKWEQ 458



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 217/460 (47%), Gaps = 39/460 (8%)

Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           ++ KKIH  ++K G      +  +LL  Y +  L   A  LFD+MP RD  SW ++++ Y
Sbjct: 19  LNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAY 78

Query: 220 CQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
            Q+    + L I   M   + +  D    A++L  CA   ++  G  +H   V      +
Sbjct: 79  NQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDD 138

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN-------------- 324
             V ++L++MYAK G+   A  VFD ++ +  VSW ++++ Y +S               
Sbjct: 139 DVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPV 198

Query: 325 ----------DPITAHGF-------FTTMQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRS 366
                       +   G+       F  M++ G+   D L L S+    A L      + 
Sbjct: 199 RNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQ 258

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           +HG ++  G +   + I NA+VDMYAK   I +A  VF  +  +DV+SW ++I G AQ+G
Sbjct: 259 IHGLVIGSG-YESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHG 317

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFV 485
            A EA++++  M    EI PN+ T+V ++ A SH G + +G K+   +I++  +   + +
Sbjct: 318 RAKEALDLYDQM-VLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQL 376

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEG 544
            TC +D+  + G +++A  L   +P     P W A++S    HG  +  +    ++L   
Sbjct: 377 FTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLN 436

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE-EFGIKP 583
           +  +  T+V L    + +G   +  R   +M + E   KP
Sbjct: 437 MH-EPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKP 475



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 39/309 (12%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +  L ++C  L  +   K++HA  V+S  +      + LV+ YA  G  S +R  FD I 
Sbjct: 107 YATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSIL 166

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCF--------YQFT-LTSGLRPDFY---------- 147
            +   +W +M+S Y R G   EA++ F        Y +T L SGL    Y          
Sbjct: 167 VKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIE 226

Query: 148 ------------TFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                           V+ AC NL     GK+IH  V+  G+E  +F++ +L+ MY +  
Sbjct: 227 MRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCS 286

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               AR +F+ M  RD  SW ++I G  Q G A EALD+ D+M L  +  + +T   ++ 
Sbjct: 287 DILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIY 346

Query: 253 VCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER-DV 310
            C+ +  +  G  L    I  + +  +L +    +++ ++ G +  A  +   M  + D 
Sbjct: 347 ACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDE 406

Query: 311 VSWNSIIAA 319
            +W ++++A
Sbjct: 407 PTWAALLSA 415


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/616 (36%), Positives = 361/616 (58%), Gaps = 10/616 (1%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S  WN  +    +    ++AL +  +M   G   +  T    L  CA     + G   H 
Sbjct: 14  STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAAYEQSNDP 326
            I K G  F  FV   LI+MY K  ++ +A +VF++     +  V +N++++ Y  ++  
Sbjct: 74  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M + G+  + +TL+ L        +     S+H   ++ G F  DV + N 
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG-FDSDVSVVNC 192

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
            + MY K G +N A  +F+ +PVK +ISWN +++GYAQNGLA+  +E+++ M+  N ++P
Sbjct: 193 FITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD-MNGVHP 251

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           +  T V +L + +++GA   G ++  ++  +    + F+   L++MY +CG +  A ++F
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +P  + V W AII  +G+HG G+ A+  F++M+  G+ PD   FV +L+ACSH+GL  
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G  YF MM+  + ++P  +HY CMVDL GRAG L  A   I++MP++PD ++WGALLGA
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C+IH N+EL  +A +R+ E++ EN+GYYVL+SNIY+N    +GV  +R + +++ LKK P
Sbjct: 432 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S +E+  +V  F  G+R H + ++IY  L  L A +      P+K     + EE  K+
Sbjct: 492 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK----DNREESNKD 547

Query: 747 HI--LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
               +  HSE+LA+AFG++++   + + I KNLR+C DCH + K +S+I  R++ VRD+ 
Sbjct: 548 GFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDAT 607

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF++G CSC DYW
Sbjct: 608 RFHHFRNGSCSCKDYW 623



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 224/487 (45%), Gaps = 41/487 (8%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLF--QSCTKLHHV---KR 65
           R L K    LQA           L + P  L +  R   F   F  +SC  L       +
Sbjct: 22  RELAKRCQFLQA-----------LSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQ 70

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT--WNSMISVYVRC 123
            H  +   G +   F  T L++ Y     +  +R  F+   +    T  +N+++S YV  
Sbjct: 71  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 130

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFV 180
            + SEAV  F Q     G+  +  T   ++ AC    NL  G  +HCS LK GF+ DV V
Sbjct: 131 SKCSEAVLLFRQMN-EEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
               + MY + G  N A+KLFD+MPV+   SWNAM+SGY Q+G A   L++   M + GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             DP+T+  +L  CA       G  +   I   G   N F++N LINMYA+ G +  A  
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV--AQL 358
           VFD M ER +VSW +II  Y        A   F  M ++GI+PD    V + S    A L
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 359 NDCRNSRSVHGF-IMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISW 415
            D    + +  F +M+R + +E      + +VD+  + G +  A  + E +P+K D   W
Sbjct: 370 TD----QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 425

Query: 416 NTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPAYSHV----GALRQGIK 469
             L+          + +E+ ++  E   E+ P N G YV +   YS+     G LR  I 
Sbjct: 426 GALLGACK----IHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIM 481

Query: 470 IHARVIK 476
           +  + +K
Sbjct: 482 MKEKKLK 488


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 260/755 (34%), Positives = 397/755 (52%), Gaps = 60/755 (7%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           LH     S  +   F  ++L    + +G ++ +R  FD + Y+ + +WNS++S Y   G 
Sbjct: 8   LHRAYSTSTGVNNSFEISRL----SRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGL 63

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
             EA   F +        P+           RN+V               W+  V+    
Sbjct: 64  PREARQMFDEM-------PE-----------RNIVS--------------WNGLVSG--- 88

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
             Y +  +   AR +F+ MP R+  SW AM+ GY Q G  VEA ++L     E   +   
Sbjct: 89  --YIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEA-ELLFWRMPERNEVSWT 145

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            +   L    R D+        LY +  G   ++  S N+I    + G +  A  +FD+M
Sbjct: 146 VMFGGLIDGGRIDDARK-----LYDMMPGK--DVVASTNMIGGLCREGRVDEAREIFDEM 198

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            ER+V++W ++I  Y Q+     A   F  M +        T VS TS++          
Sbjct: 199 RERNVITWTTMITGYGQNKRVDVARKLFEVMPEK-------TEVSWTSMLLGYTLSGRIE 251

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
               F       M+ VI  NA++    ++G I  A  VF+ +  +D  +W  +I  Y + 
Sbjct: 252 DAEEFF--EVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERK 309

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G   EA+E+F  M+    + P+  + +SIL   + + +L+ G ++HA +++     DV+V
Sbjct: 310 GFELEALELFAQMQR-QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYV 368

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
           A+ L+ MY KCG +  A  +F + P    + WN+IIS +  HG G++AL  F +M   G 
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGT 428

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
            P+ +T +++LTACS+ G + EG   F  M+ +F + P ++HY C VD+ GRAG +  A 
Sbjct: 429 MPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
             I +M ++PDA++WGALLGAC+ H  ++L  VA+ +LFE++ EN G Y+L+S+I A+  
Sbjct: 489 ELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRS 548

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKM 724
           KW  V E+R   R + + K PG S IEV  KV +F  G  R HP+   I   L      +
Sbjct: 549 KWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLL 608

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           +  GY PD S VL DV+E+EK   L+ HSERLA+A+G++  P   PI++ KNLRVCGDCH
Sbjct: 609 REAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCH 668

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
              K IS++TEREII+RD+NRFHHF +G CSC DY
Sbjct: 669 AAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 41/273 (15%)

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
            I+ R +     +  +  +   +++G IN A   F+ L  K + SWN++++GY  NGL  
Sbjct: 6   LILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPR 65

Query: 430 EAIEVFQMMEECNEINPNQ--GTYV------------SILPAYSHV-------GALRQGI 468
           EA ++F  M E N ++ N     Y+             I+P  + V       G +++G+
Sbjct: 66  EARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGM 125

Query: 469 KIHARVI------KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
            + A ++      +N + + V     L+D     GRIDDA  L+  +P    V    +I 
Sbjct: 126 VVEAELLFWRMPERNEVSWTVMFGG-LID----GGRIDDARKLYDMMPGKDVVASTNMIG 180

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
                G+ D+A   F +M +  V    IT+ +++T    +  V   ++ F +M E+  + 
Sbjct: 181 GLCREGRVDEAREIFDEMRERNV----ITWTTMITGYGQNKRVDVARKLFEVMPEKTEVS 236

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
                +  M+  +  +G +  A  F + MP++P
Sbjct: 237 -----WTSMLLGYTLSGRIEDAEEFFEVMPMKP 264


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/675 (36%), Positives = 370/675 (54%), Gaps = 15/675 (2%)

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +L  G ++H +++KLGF  D  +  +L+ MY + G  ++A ++FD MP R+  SW A++ 
Sbjct: 215 SLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMV 274

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G+   G A E L +  EMR  G S +  T+++ L  C       +G+ IH   V+ G E 
Sbjct: 275 GFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEG 332

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +  V+N+L+ MY+K      A RVFD +  R++ +WNS+I+ Y  +     +   F  MQ
Sbjct: 333 HDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQ 392

Query: 338 QA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF-MEDVIIGNAVVDMYAKLG 395
           +    QPD  T  SL    + L   R    VH  +  RG     + I+  A++D+Y K  
Sbjct: 393 RRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCH 452

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            +  A  VF+GL  ++ I W T+I G+AQ G   EA+ +F+       +  +     S++
Sbjct: 453 RLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG-VRADGHVLSSVV 511

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
             ++    + QG ++H    K     DV VA  LVDMY KCG   +A   F ++P  + V
Sbjct: 512 AVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVV 571

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W A+I+  G HG G +A++ F +M  EGV  D + +++LL+ACSHSGLV E +RYF  +
Sbjct: 572 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 631

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
            ++  ++P  +HY CMVDL GRAG L  A   I +MP+ P   +W  LL ACR+H ++ +
Sbjct: 632 CQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAV 691

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G    D L  VD +N   YV++SNI A  G+W     +R   R +GL+K  G S  EV+ 
Sbjct: 692 GREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDK 751

Query: 696 KVDIFY-TGNRTHPKYEKIYDELRNLTAKMKS-LGYVPDKSFVLQDVEEDEKEHILTSHS 753
           +V  FY  G+  HP+   I   LR + A+M+  LGY  D    L DV+E+ +   L  HS
Sbjct: 752 EVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVDEESRVESLREHS 811

Query: 754 ERLAIAFGIISSPPKSP--------IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 805
           ERLA+   ++               ++++KNLRVCGDCH + K +S +  R ++VRD+NR
Sbjct: 812 ERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANR 871

Query: 806 FHHFKDGICSCGDYW 820
           FH F++G CSC DYW
Sbjct: 872 FHRFQNGACSCRDYW 886



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 238/500 (47%), Gaps = 21/500 (4%)

Query: 41  LENESREIDFDDLFQSC--TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFS 98
           L  E R +  D L  S   + L    +LHA L+  G       +  L++ YA  G L  +
Sbjct: 195 LPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMA 254

Query: 99  RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
              FD +  RNV +W +++  ++  G   E +  F +    SG  P+ +T    LKAC  
Sbjct: 255 GEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMR-GSGTSPNEFTLSATLKACGG 313

Query: 159 LVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
               G +IH   ++ GFE    VA SL+ MY +      AR++FD +P R+  +WN+MIS
Sbjct: 314 GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMIS 373

Query: 218 GYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           GY  +G   ++L +  EM R      D  T AS+L  C+       G  +H  +   G+ 
Sbjct: 374 GYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVS 433

Query: 277 --FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
              N  ++  L+++Y K   +  A++VFD +  R+ + W ++I  + Q      A   F 
Sbjct: 434 PASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFR 493

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
               +G++ D   L S+ ++ A        + VH +  +    + DV + N++VDMY K 
Sbjct: 494 RFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKC 552

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G+   A   F  +P ++V+SW  +I G  ++G   EAI++F+ M +   +  ++  Y+++
Sbjct: 553 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEM-QAEGVEADEVAYLAL 611

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVA------TCLVDMYGKCGRIDDAMSLFYQ 508
           L A SH G + +  +  +R+     C D  +        C+VD+ G+ G + +A  L   
Sbjct: 612 LSACSHSGLVDECRRYFSRI-----CQDRRMRPKAEHYACMVDLLGRAGELREAKELILS 666

Query: 509 VPRSSSVP-WNAIISCHGIH 527
           +P   +V  W  ++S   +H
Sbjct: 667 MPMEPTVGVWQTLLSACRVH 686



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 230/442 (52%), Gaps = 23/442 (5%)

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           + A+D+L  + +E   M    +A +L   AR  ++  G+ +H  ++K G   +  ++NNL
Sbjct: 186 LRAIDLLGFLPMERRRM----IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNL 241

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I+MYAK G +  A  VFD M ER+VVSW +++  +    +       F  M+ +G  P+ 
Sbjct: 242 IDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNE 301

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            TL +  ++ A     R    +HG  +R G+   DV + N++V MY+K      A  VF+
Sbjct: 302 FTLSA--TLKACGGGTRAGVQIHGVCVRTGFEGHDV-VANSLVVMYSKGRWTGDARRVFD 358

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P +++ +WN++I+GYA  G   +++ VF+ M+  ++  P++ T+ S+L A S +GA R
Sbjct: 359 VIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAR 418

Query: 466 QGIKIHARVIKNCL--CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           +G ++HA +    +    +  +A  L+D+Y KC R+  AM +F  + R +++ W  +I  
Sbjct: 419 EGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVG 478

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIK 582
           H   GQ  +A+  FR+    GVR D     S++   +   LV +G Q + +  +   G+ 
Sbjct: 479 HAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLD 538

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
             + +   +VD++ + G  G A    + MP R   S W A++     HG+   G  A D 
Sbjct: 539 VSVAN--SLVDMYLKCGLTGEAGRRFREMPARNVVS-WTAMINGVGKHGH---GREAID- 591

Query: 643 LFE------VDSENVGYYVLMS 658
           LFE      V+++ V Y  L+S
Sbjct: 592 LFEEMQAEGVEADEVAYLALLS 613



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 190/418 (45%), Gaps = 20/418 (4%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H + V +G       +  LV  Y+       +R  FD I  RN+ TWNSMIS Y   G
Sbjct: 320 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 379

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFE--WDVF 179
           +  +++  F +       +PD +TF  +LKAC  L    +G ++H ++   G     +  
Sbjct: 380 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 439

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           +A +LL +Y +     VA ++FD +  R++  W  +I G+ Q G   EA+ +       G
Sbjct: 440 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 499

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V  D   ++S++ V A    +  G  +H Y  K     ++ V+N+L++MY K G+   A 
Sbjct: 500 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 559

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD---LLTLVSLTSIVA 356
           R F +M  R+VVSW ++I    +      A   F  MQ  G++ D    L L+S  S   
Sbjct: 560 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 619

Query: 357 QLNDCRN--SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            +++CR   SR      MR             +VD+  + G +  A  +   +P++  + 
Sbjct: 620 LVDECRRYFSRICQDRRMR-----PKAEHYACMVDLLGRAGELREAKELILSMPMEPTVG 674

Query: 415 -WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR--QGIK 469
            W TL++    +   +   EV  ++   +  NP    YV +    +  G  R  QGI+
Sbjct: 675 VWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPV--NYVMLSNILAEAGEWRECQGIR 730


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/639 (36%), Positives = 368/639 (57%), Gaps = 37/639 (5%)

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           N   +  C  G+  EA     E  L  +  +P   +++L  C    ++  G  +H  I  
Sbjct: 42  NEQFATLCSKGHIREAF----ESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFT 97

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G   + F+SN+L+N+Y+KFG ++ A+ +FD+M  R+++S N +I AY    +  +A   
Sbjct: 98  SGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNL 157

Query: 333 F-------------------------------TTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
           F                               + M +    PD  +L S+    A L   
Sbjct: 158 FDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGAL 217

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              + VH ++M+ G F  ++++G ++  MY K G ++    V   +P   +++WNTL++G
Sbjct: 218 LAGQQVHAYVMKCG-FECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSG 276

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
            AQ G     ++ + MM+      P++ T+VS++ + S +  L QG +IHA  +K     
Sbjct: 277 KAQKGYFEGVLDQYCMMKMAG-FRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASS 335

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           +V V + LV MY +CG + D++  F +      V W+++I+ +G HGQG++A+  F +M 
Sbjct: 336 EVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEME 395

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
            E +  + ITF+SLL ACSH GL  +G   F MM +++G+K  L+HY C+VDL GR+G L
Sbjct: 396 QENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCL 455

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A   I++MPV+ DA IW  LL AC+IH N E+    +D +  +D ++   YVL++NIY
Sbjct: 456 EEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIY 515

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLT 721
           ++  +W+ V EVR   +D+ +KK PG S +EV N+V  F+ G+  HPK+ +I   L  LT
Sbjct: 516 SSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELT 575

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
           +++K  GYVPD S VL D++ +EKE IL  HSE+LAIAF ++++P   PI++ KNLRVC 
Sbjct: 576 SEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCS 635

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH   K+IS+I + EIIVRDS+RFHHFK+G CSCGDYW
Sbjct: 636 DCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 261/548 (47%), Gaps = 64/548 (11%)

Query: 92  LGDLSFSRHTFD-HISYRNVYTWNSMIS--VYVRCGRLSEAVDCFYQFTLTSGLRPDFYT 148
           +G    SR  F   I ++N     S IS   + + GR S+  + F        +R  F +
Sbjct: 1   MGRFVVSRTRFSVPIVFQNSIFRFSTISFKTHFQNGRFSDGNEQFATLCSKGHIREAFES 60

Query: 149 F-----------PPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
           F             +L+AC   +++  GK++H  +   G   D F++  LL++Y +FG  
Sbjct: 61  FLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGEL 120

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM------------------- 235
             A  LFD MP R+  S N MI  Y   GN   A ++ DEM                   
Sbjct: 121 QAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFE 180

Query: 236 ----------RLEGVSM--DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
                     R+  +S   D  ++ S+L  CA    +L+G  +H Y++K G E NL V  
Sbjct: 181 MNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGC 240

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +L +MY K G M    RV + M +  +V+WN++++   Q          +  M+ AG +P
Sbjct: 241 SLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRP 300

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
           D +T VS+ S  ++L      + +H   ++ G    +V + +++V MY++ G +  +   
Sbjct: 301 DKITFVSVISSCSELAILCQGKQIHAEAVKAG-ASSEVSVVSSLVSMYSRCGCLQDSIKT 359

Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
           F     +DV+ W+++I  Y  +G   EAI++F  ME+ N +  N+ T++S+L A SH G 
Sbjct: 360 FLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQEN-LPGNEITFLSLLYACSHCGL 418

Query: 464 LRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
             +G+ +   ++K   L   +   TCLVD+ G+ G +++A ++   +P ++ ++ W  ++
Sbjct: 419 KDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLL 478

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPD------HITFVSLLTACSHSGLVSEGQRYF--H 573
           S   IH   + A    R++ DE +R D      ++   ++ ++ +    VSE +R     
Sbjct: 479 SACKIHKNAEIA----RRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDK 534

Query: 574 MMQEEFGI 581
           M+++E GI
Sbjct: 535 MVKKEPGI 542



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 213/464 (45%), Gaps = 47/464 (10%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F +L Q+C  L  V   K+LH+L+  SG     F S  L+N Y+  G+L  +   FD + 
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTSGLR-------------- 143
            RN+ + N MI  Y+  G L  A + F +           + +GL               
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 144 -------PDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
                  PD Y+   VL+ C +L   + G+++H  V+K GFE ++ V  SL HMY + G 
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            +   ++ + MP     +WN ++SG  Q G     LD    M++ G   D IT  S++  
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C+    +  G  IH   VK G    + V ++L++MY++ G ++ +++ F +  ERDVV W
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           +S+IAAY        A   F  M+Q  +  + +T +SL    +          +   +++
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVK 431

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAI 432
           +      +     +VD+  + G +  A A+   +PVK D I W TL++    +  A  A 
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIAR 491

Query: 433 EVFQMMEECNEINP-NQGTYVSILPAYS------HVGALRQGIK 469
            V    +E   I+P +  +YV +   YS      +V  +R+ +K
Sbjct: 492 RV---ADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMK 532



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 93/219 (42%), Gaps = 29/219 (13%)

Query: 47  EIDFDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           +I F  +  SC++L      K++HA  V +G    V   + LV+ Y+  G L  S  TF 
Sbjct: 302 KITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFL 361

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK 163
               R+V  W+SMI+ Y   G+  EA+  F +      L  +  TF  +L AC       
Sbjct: 362 ECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEME-QENLPGNEITFLSLLYACS------ 414

Query: 164 KIHCSVLKLGFE-WDVFV-----AASLLHMYC------RFGLANVARKLFDDMPVR-DSG 210
             HC +   G   +D+ V      A L H  C      R G    A  +   MPV+ D+ 
Sbjct: 415 --HCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAI 472

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
            W  ++S      NA  A  + DE+    + +DP   AS
Sbjct: 473 IWKTLLSACKIHKNAEIARRVADEV----LRIDPQDSAS 507


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 394/698 (56%), Gaps = 24/698 (3%)

Query: 141 GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           G+  D +    ++ AC   + L +G+++H  ++  GF  D+ +  +LL MY + G  + A
Sbjct: 5   GIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDA 64

Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
           +++F+ M ++D  +W+++IS Y ++G    A+ +   M  EGV  + +T A  L  CA  
Sbjct: 65  KRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASV 124

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
             +  G  IH  I+   +  +  + ++L+NMY K   M  A +VF+ M  R+V S+ ++I
Sbjct: 125 AGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMI 184

Query: 318 AAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           +AY Q+ +   A   F+ M +   I+P+  T  ++   V  L +    R VH  +  RG 
Sbjct: 185 SAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRG- 243

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F  +V++ NA+V MY K G    A  VF+ +  ++VISW ++I  YAQ+G   EA+ +F+
Sbjct: 244 FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFK 303

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M+    + P+  ++ S L A + +GAL +G +IH RV++  L     + T L+ MY +C
Sbjct: 304 RMD----VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARC 358

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G +DDA  +F ++    +   NA+I+    HG+  +AL  +R+M  EG+  D ITFVS+L
Sbjct: 359 GSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVL 418

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSH+ LV++ + +F  +  + G+ P ++HY CMVD+ GR+G LG A   ++ MP + D
Sbjct: 419 VACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTD 478

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           A  W  LL  C+ HG++  G  A+ ++FE+       YV +SN+YA   +++    VR  
Sbjct: 479 AVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKE 538

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK-------YEKIYDELRNLTAKMKSLGY 729
             +RG+      S IE++N++ +F +G R   +        E++   L  L   MK  GY
Sbjct: 539 MEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGY 598

Query: 730 VPDKSFVLQDVE----EDEKEHILTSHSERLAIAFGIISS--PPKS-PIQIFKNLRVCGD 782
           VPD   V  + +    E+EK+  L  HSERLAIA+G+I++  P  S P+++  + RVC D
Sbjct: 599 VPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSD 658

Query: 783 CHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           CH+  K +S I E+ I VRD NRFHHF+ G CSCGD+W
Sbjct: 659 CHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 249/505 (49%), Gaps = 28/505 (5%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           L  +CTKL  +   +RLH  L+++G    +   T L+  YA  G L  ++  F+ +  ++
Sbjct: 16  LVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKD 75

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIH 166
           ++ W+S+IS Y R GR   AV   Y+  +  G+ P+  TF   L  C +   L DG+ IH
Sbjct: 76  LFAWSSIISAYARAGRGEMAV-VLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 134

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
             +L      D  +  SLL+MY +      ARK+F+ M  R+  S+ AMIS Y Q+G   
Sbjct: 135 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 194

Query: 227 EALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           EAL++   M ++E +  +  T A+IL       N+  G  +H ++   G + N+ V N L
Sbjct: 195 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 254

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + MY K G    A +VFD M  R+V+SW S+IAAY Q  +P  A   F  M    ++P  
Sbjct: 255 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSG 311

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
           ++  S  +  A L      R +H  ++     +    +  +++ MYA+ G ++ A  VF 
Sbjct: 312 VSFSSALNACALLGALDEGREIHHRVVE--AHLASPQMETSLLSMYARCGSLDDARRVFN 369

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG-TYVSILPAYSHVGAL 464
            +  +D  S N +I  + Q+G   +A+ +++ ME+  E  P  G T+VS+L A SH    
Sbjct: 370 RMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQ--EGIPADGITFVSVLVACSHT--- 424

Query: 465 RQGIKIHARVIKNCLCFDVFVAT------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPW 517
              +    R     L  D  V        C+VD+ G+ GR+ DA  L   +P ++ +V W
Sbjct: 425 --SLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAW 482

Query: 518 NAIISCHGIHGQGDKALNFFRQMLD 542
             ++S    HG  ++     R++ +
Sbjct: 483 MTLLSGCKRHGDLNRGERAARKVFE 507



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 199/398 (50%), Gaps = 7/398 (1%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M   G+  D   V S++  C +   +  G  +H +++  G   ++ +   L+ MYAK G 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
           +  A RVF+ M  +D+ +W+SII+AY ++     A   +  M   G++P+++T       
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
            A +    + R++H  I+      +DV + +++++MY K   +  A  VFEG+  ++V S
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDV-LQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179

Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
           +  +I+ Y Q G  +EA+E+F  M +   I PN  T+ +IL A   +G L +G K+H  +
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239

Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
                  +V V   LV MYGKCG   +A  +F  +   + + W ++I+ +  HG   +AL
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299

Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
           N F++M    V P  ++F S L AC+  G + EG+   H + E     P ++    ++ +
Sbjct: 300 NLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSM 354

Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
           + R G L  A      M  R DA    A++ A   HG 
Sbjct: 355 YARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGR 391


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/502 (41%), Positives = 316/502 (62%), Gaps = 2/502 (0%)

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
            Y   ND   A   F+ + ++G + D +TL +       L      + +H   ++ G F 
Sbjct: 4   GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG-FD 62

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D+ + + ++DMY K G + +A  VF  +   D ++W ++I+G   NG   +A+ ++  M
Sbjct: 63  SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 122

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
            + + + P++ T+ +++ A S V AL QG ++HA VIK     D FV T LVDMY KCG 
Sbjct: 123 RQ-SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 181

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           I+DA  LF ++   +   WNA++     HG  ++A+N F+ M   G+ PD ++F+ +L+A
Sbjct: 182 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 241

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSH+GL SE   Y H M  ++GI+P ++HY C+VD  GRAG +  A   I+ MP +  AS
Sbjct: 242 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 301

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           I  ALLGACRI G++E G   + RLF ++  +   YVL+SNIYA   +W+ V + R + +
Sbjct: 302 INRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMK 361

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
            + +KK PG+S I+V N + +F   +R+HP+ + IYD++  +   ++  GYVPD  FVL 
Sbjct: 362 RKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLL 421

Query: 739 DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREI 798
           DVE++EKE  L  HSE+LAIA+G+IS+P  + I++ KNLRVCGDCHN  K+IS++ EREI
Sbjct: 422 DVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREI 481

Query: 799 IVRDSNRFHHFKDGICSCGDYW 820
           ++RD+NRFHHF+DG+CSCGDYW
Sbjct: 482 VLRDANRFHHFRDGVCSCGDYW 503



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 157/305 (51%), Gaps = 3/305 (0%)

Query: 215 MISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
           M+ GY    +  +AL++   +   G   D IT+A+    C     +  G  IH + +K G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 275 LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
            + +L V++ +++MY K G M +A  VF+ +   D V+W S+I+    + +   A   + 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 335 TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
            M+Q+ + PD  T  +L    + +      R +H  +++    + D  +G ++VDMYAK 
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC-VSDPFVGTSLVDMYAKC 179

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G I  A  +F+ + V+++  WN ++ G AQ+G A EA+ +F+ M+  + I P++ +++ I
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS-HGIEPDRVSFIGI 238

Query: 455 LPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           L A SH G   +  + +H+      +  ++   +CLVD  G+ G + +A  +   +P  +
Sbjct: 239 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 298

Query: 514 SVPWN 518
           S   N
Sbjct: 299 SASIN 303



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 7/294 (2%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
            +     SG + D  T     KAC  LV    GK+IH   +K GF+ D+ V + +L MY 
Sbjct: 17  LFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYI 76

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G    A  +F+ +   D  +W +MISG   +GN  +AL I   MR   V  D  T A+
Sbjct: 77  KCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFAT 136

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           ++   +    +  G  +H  ++K     + FV  +L++MYAK G +  A R+F +M  R+
Sbjct: 137 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 196

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS-RSVH 368
           +  WN+++    Q  +   A   F +M+  GI+PD ++ + + S  +       +   +H
Sbjct: 197 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 256

Query: 369 GFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              M   + +E  I   + +VD   + G++  A  V E +P K   S N  + G
Sbjct: 257 S--MPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 15/255 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K++HA  + +G    +  ++ +++ Y   GD+  +   F++IS  +   W SMIS 
Sbjct: 46  LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 105

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEW 176
            V  G   +A+  +++    S + PD YTF  ++KA      L  G+++H +V+KL    
Sbjct: 106 CVDNGNEDQALRIYHRMR-QSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS 164

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           D FV  SL+ MY + G    A +LF  M VR+   WNAM+ G  Q GNA EA+++   M+
Sbjct: 165 DPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMK 224

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH------GLEFNLFVSNNLINMYA 290
             G+  D ++   IL  C+      +GL    Y   H      G+E  +   + L++   
Sbjct: 225 SHGIEPDRVSFIGILSACSH-----AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALG 279

Query: 291 KFGMMRHALRVFDQM 305
           + G+++ A +V + M
Sbjct: 280 RAGLVQEADKVIETM 294



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 6/177 (3%)

Query: 56  SC-TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
           SC T L   ++LHA ++    +   F  T LV+ YA  G++  +   F  ++ RN+  WN
Sbjct: 142 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWN 201

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----IHCSVL 170
           +M+    + G   EAV+ F     + G+ PD  +F  +L AC +     +    +H    
Sbjct: 202 AMLVGLAQHGNAEEAVNLFKSMK-SHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 260

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
             G E ++   + L+    R GL   A K+ + MP + S S N  + G C+    VE
Sbjct: 261 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 317


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/706 (34%), Positives = 390/706 (55%), Gaps = 11/706 (1%)

Query: 22  AHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVK---RLHALLVVSGKIKT 78
           AHR + +  A+ L+         S    F  L ++C+ L+       LH  ++VSG    
Sbjct: 49  AHRQVLATYASMLKT-----HVPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLD 103

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
            + ++ L+NFYA  G    +R  FD +  RNV  W S+I  Y R GR+ EA   F +   
Sbjct: 104 AYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMR- 162

Query: 139 TSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 198
             G++P   T   +L     L   + +H S +  GF  D+ ++ S+L MY +      +R
Sbjct: 163 RQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSR 222

Query: 199 KLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD 258
           KLFD M  RD  SWN+++S Y Q G   E L +L  MR++G   DP T  S+L V A   
Sbjct: 223 KLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRG 282

Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 318
            +  G  +H  I++   + +  V  +LI MY K G +  A R+F++ +++DVV W ++I+
Sbjct: 283 ELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMIS 342

Query: 319 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
              Q+     A   F  M + G++    T+ S+ +  AQL       SVHG++ R    M
Sbjct: 343 GLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPM 402

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            D+   N++V M+AK G ++ +  VF+ +  ++++SWN +ITGYAQNG   +A+ +F  M
Sbjct: 403 -DIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEM 461

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
              ++  P+  T VS+L   +  G L  G  IH+ VI+N L   + V T LVDMY KCG 
Sbjct: 462 RSDHQ-TPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGD 520

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +D A   F Q+P    V W+AII  +G HG+G+ AL F+ + L+ G++P+H+ F+S+L++
Sbjct: 521 LDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSS 580

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CSH+GLV +G   +  M  +FGI P+L+H+ C+VDL  RAG +  A+N  +     P   
Sbjct: 581 CSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLD 640

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           + G +L ACR +GN ELG   ++ +  +   + G +V +++ YA++ KWE V E  +  R
Sbjct: 641 VLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMR 700

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
             GLKK PGWS I+++  +  F+T + +HP++++I   L+ L  +M
Sbjct: 701 SLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKFLRKEM 746



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 212/415 (51%), Gaps = 9/415 (2%)

Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
           S+NA+I+ +   G   + L     M    V  D  T  S+L  C+  +    GL +H  I
Sbjct: 36  SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +  GL  + +++++LIN YAKFG    A +VFD M ER+VV W SII  Y ++     A 
Sbjct: 96  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M++ GIQP  +T++SL   V++L    + + +HG  +  G FM D+ + N+++ M
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSEL---AHVQCLHGSAILYG-FMSDINLSNSMLSM 211

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           Y K   I  +  +F+ +  +D++SWN+L++ YAQ G   E + + + M       P+  T
Sbjct: 212 YGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTM-RIQGFEPDPQT 270

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
           + S+L   +  G L+ G  +H ++++ C   D  V T L+ MY K G ID A  +F +  
Sbjct: 271 FGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSL 330

Query: 511 RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR 570
               V W A+IS    +G  DKAL  FRQML  GV+    T  S++TAC+  G  + G  
Sbjct: 331 DKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTS 390

Query: 571 -YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
            + +M + E  +   +     +V +  + GHL  +      M  R   S W A++
Sbjct: 391 VHGYMFRHELPMD--IATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVS-WNAMI 442


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/559 (39%), Positives = 344/559 (61%), Gaps = 8/559 (1%)

Query: 266 IHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           IH  +++ G  E N  ++  L N+    G M +A +VFD+M +  +  WN++   Y ++ 
Sbjct: 30  IHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
            P  +   +  M+  G++PD  T   +   ++QL D     ++H  +++ G F    I+ 
Sbjct: 89  LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG-FGCLGIVA 147

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC-NE 443
             +V MY K G ++SA  +FE + VKD+++WN  +    Q G ++ A+E F  M  C + 
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM--CADA 205

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           +  +  T VS+L A   +G+L  G +I+ R  K  +  ++ V    +DM+ KCG  + A 
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            LF ++ + + V W+ +I  + ++G   +AL  F  M +EG+RP+++TF+ +L+ACSH+G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325

Query: 564 LVSEGQRYFHMMQE--EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           LV+EG+RYF +M +  +  ++P  +HY CMVDL GR+G L  A+ FI+ MPV PD  IWG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALLGAC +H +M LG   +D L E   +   Y+VL+SNIYA  GKW+ VD+VRS  R  G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
            KK   +SS+E   K+  F  G+++HP+ + IY++L  +  K++ +GYVPD   V  DVE
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
            +EKE  L+ HSE+LAIAFG+I   P  PI++ KNLR C DCH ++KF+S +T  EII+R
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D NRFHHF++G+CSC ++W
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L  S +K   +K++HA+++ +G  +     T+L+     +GD+ ++R  FD +    ++ 
Sbjct: 17  LRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFL 76

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
           WN++   YVR     E++   Y+     G+RPD +T+P V+KA   L D   G  +H  V
Sbjct: 77  WNTLFKGYVRNQLPFESL-LLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV 135

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K GF     VA  L+ MY +FG  + A  LF+ M V+D  +WNA ++   Q+GN+  AL
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +  ++M  + V  D  TV S+L  C +  ++  G  I+    K  ++ N+ V N  ++M+
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMH 255

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G    A  +F++M +R+VVSW+++I  Y  + D   A   FTTMQ  G++P+ +T +
Sbjct: 256 LKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFL 315

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRG-WFMEDVIIGNA-VVDMYAKLGIINSACAVFEGL 407
            + S  +        +     +++     +E      A +VD+  + G++  A    + +
Sbjct: 316 GVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375

Query: 408 PVK-DVISWNTLITGYA 423
           PV+ D   W  L+   A
Sbjct: 376 PVEPDTGIWGALLGACA 392


>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
 gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/545 (38%), Positives = 338/545 (62%), Gaps = 3/545 (0%)

Query: 278 NLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           N F ++NL+   A   +G M +A  +F Q+ +     +N++I  Y    +   A   +  
Sbjct: 16  NSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYE 75

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
           M + G++ D  T  +L    A L        +HG+I +RG    D+ + N++++MY K G
Sbjct: 76  MLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRG-LEGDLFVQNSLINMYGKCG 134

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL 455
            I  +C+VFE +  +DV SW+ +I  +A  G+ SE + VF  M       P +   VS+L
Sbjct: 135 KIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVL 194

Query: 456 PAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            A +H+GAL  G   H  +++N    +V V T L+DMY KCG I+  +SLF ++ + + +
Sbjct: 195 SACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQL 254

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            ++ +I+   +HG+G +AL  F  ML+EG++PD + ++ +L+AC+H+GLV EG + F+ M
Sbjct: 255 SYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRM 314

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           + E GI+P ++HYGC+V L GRAG L  A   I++MP++P+  +W  LL AC+ H N+E+
Sbjct: 315 KLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEI 374

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
           G +A+  L E++S N G YV++SN+YA   +WE V ++R+    +G  +TPG+S ++V  
Sbjct: 375 GEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVER 434

Query: 696 KVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSER 755
           K+  F + + +HP+ + +Y+ +  +  ++K  GY PD S VL DV+E+EK   L +HS++
Sbjct: 435 KIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQK 494

Query: 756 LAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICS 815
           LA+AF +I +   +PI+I +NLR+C DCH +TK IS I +REI VRD NRFHHFKDG CS
Sbjct: 495 LAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREITVRDRNRFHHFKDGTCS 554

Query: 816 CGDYW 820
           C DYW
Sbjct: 555 CRDYW 559



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 188/372 (50%), Gaps = 14/372 (3%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCR---FGLANVARKLFDDMPVRDSGSWNAMISGY 219
           K++H  VLK    W+    AS L   C    +G  + A  +F  +    +  +N MI GY
Sbjct: 5   KQVHAQVLK----WENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRGY 60

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
               N   AL +  EM   GV  D  T  ++   CA   +I  G+ IH YI K GLE +L
Sbjct: 61  VNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDL 120

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           FV N+LINMY K G +  +  VF+ M  RDV SW++IIAA+            F  M + 
Sbjct: 121 FVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSRE 180

Query: 340 G-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
           G  +P+   LVS+ S    L      R  H  ++R    M +VI+  +++DMY K G I 
Sbjct: 181 GSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREM-NVIVQTSLIDMYVKCGCIE 239

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPA 457
              ++F+ +  K+ +S++ +ITG A +G   EA++VF  M+EE   + P+   Y+ +L A
Sbjct: 240 KGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEE--GLKPDDVVYLGVLSA 297

Query: 458 YSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
            +H G + +G++   R+ +++ +   +    C+V + G+ G ++ A+     +P + + V
Sbjct: 298 CNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEV 357

Query: 516 PWNAIISCHGIH 527
            W  ++S    H
Sbjct: 358 VWRGLLSACKFH 369



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 203/435 (46%), Gaps = 33/435 (7%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMI 117
           +   K++HA ++   K +  F ++ LV   A  + G + ++   F  I     + +N+MI
Sbjct: 1   MEEFKQVHAQVL---KWENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMI 57

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGF 174
             YV    +  A+  +Y+  L  G+  D +T+P + KAC   R++ +G +IH  + K G 
Sbjct: 58  RGYVNVMNMENALFLYYEM-LERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGL 116

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           E D+FV  SL++MY + G   ++  +F+ M  RD  SW+A+I+ +   G   E L +  E
Sbjct: 117 EGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGE 176

Query: 235 MRLEGVSMDPITV-ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           M  EG      ++  S+L  C     +  G   H+ ++++  E N+ V  +LI+MY K G
Sbjct: 177 MSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCG 236

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD------LLT 347
            +   L +F +M++++ +S++ +I         + A   F+ M + G++PD      +L+
Sbjct: 237 CIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLS 296

Query: 348 LVSLTSIVAQLNDCRNSRSV-HGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFE 405
             +   +V +   C N   + HG        +E  I     +V +  + G++N A     
Sbjct: 297 ACNHAGLVDEGLQCFNRMKLEHG--------IEPTIQHYGCIVHLMGRAGMLNKALEHIR 348

Query: 406 GLPVK-DVISWNTLITG--YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            +P+K + + W  L++   +  N    E     + + E N  NP  G YV +   Y+   
Sbjct: 349 SMPIKPNEVVWRGLLSACKFHHNLEIGEI--AAKSLGELNSSNP--GDYVVLSNMYARAK 404

Query: 463 ALRQGIKIHARVIKN 477
                 KI   + + 
Sbjct: 405 RWEDVAKIRTEMARK 419


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/616 (36%), Positives = 361/616 (58%), Gaps = 10/616 (1%)

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
           S  WN  +    +    ++AL +  +M   G   +  T    L  CA     + G   H 
Sbjct: 5   STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 64

Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAAYEQSNDP 326
            I K G  F  FV   LI+MY K  ++ +A +VF++     +  V +N++++ Y  ++  
Sbjct: 65  QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124

Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
             A   F  M + G+  + +TL+ L        +     S+H   ++ G F  DV + N 
Sbjct: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG-FDSDVSVVNC 183

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
            + MY K G +N A  +F+ +PVK +ISWN +++GYAQNGLA+  +E+++ M+  N ++P
Sbjct: 184 FITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMD-MNGVHP 242

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           +  T V +L + +++GA   G ++  ++  +    + F+   L++MY +CG +  A ++F
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
             +P  + V W AII  +G+HG G+ A+  F++M+  G+ PD   FV +L+ACSH+GL  
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
           +G  YF MM+  + ++P  +HY CMVDL GRAG L  A   I++MP++PD ++WGALLGA
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
           C+IH N+EL  +A +R+ E++ EN+GYYVL+SNIY+N    +GV  +R + +++ LKK P
Sbjct: 423 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482

Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
           G S +E+  +V  F  G+R H + ++IY  L  L A +      P+K     + EE  K+
Sbjct: 483 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEK----DNREESNKD 538

Query: 747 HI--LTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
               +  HSE+LA+AFG++++   + + I KNLR+C DCH + K +S+I  R++ VRD+ 
Sbjct: 539 GFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDAT 598

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHF++G CSC DYW
Sbjct: 599 RFHHFRNGSCSCKDYW 614



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 224/487 (45%), Gaps = 41/487 (8%)

Query: 11  RRLCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLF--QSCTKLHHV---KR 65
           R L K    LQA           L + P  L +  R   F   F  +SC  L       +
Sbjct: 13  RELAKRCQFLQA-----------LSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQ 61

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT--WNSMISVYVRC 123
            H  +   G +   F  T L++ Y     +  +R  F+   +    T  +N+++S YV  
Sbjct: 62  FHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSN 121

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFV 180
            + S+AV  F Q     G+  +  T   ++ AC    NL  G  +HCS LK GF+ DV V
Sbjct: 122 SKCSDAVLLFRQMN-EEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
               + MY + G  N A+KLFD+MPV+   SWNAM+SGY Q+G A   L++   M + GV
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             DP+T+  +L  CA       G  +   +   G   N F++N LINMYA+ G +  A  
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQA 300

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV--AQL 358
           VFD M ER +VSW +II  Y        A   F  M ++GI+PD    V + S    A L
Sbjct: 301 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 360

Query: 359 NDCRNSRSVHGF-IMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK-DVISW 415
            D    + +  F +M+R + +E      + +VD+  + G +  A  + E +P+K D   W
Sbjct: 361 TD----QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVW 416

Query: 416 NTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPAYSHV----GALRQGIK 469
             L+          + +E+ ++  E   E+ P N G YV +   YS+     G LR  I 
Sbjct: 417 GALLGACK----IHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIM 472

Query: 470 IHARVIK 476
           +  + +K
Sbjct: 473 MKEKKLK 479


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/674 (36%), Positives = 371/674 (55%), Gaps = 47/674 (6%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN---VARKLFDDMPVRD 208
           +   C++L   K+I   + K        V+  LL ++C   L +    AR+LF D+   D
Sbjct: 11  LFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLL-LHCAVTLPDSLHYARRLFLDIRNPD 69

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIH 267
              +N +I G   S     AL +  EMR + V++ D  + A +L   A    + +GL +H
Sbjct: 70  VFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLH 129

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
              V +GL+ +LFV   LI+MYA+   +  A +VFD+M+E ++V+WN+I+AA  +     
Sbjct: 130 CLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVK 189

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  M           + +LTS                      W        N +
Sbjct: 190 DAEQVFRCM----------PIRNLTS----------------------W--------NIM 209

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +  Y K G +  A  VF  +P+KD +SW+T+I G+A NG  ++A   F+ +     + PN
Sbjct: 210 LAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRR-EGMRPN 268

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
           + +   +L A +  GA   G  +H  V K+     + V   L+D Y KCG +D A  +F 
Sbjct: 269 EVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFD 328

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
            + R S+V W A+I+   +HG G++A+  F +M +  ++PD ITF+S+L ACSH+GLV  
Sbjct: 329 NMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDL 388

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G  YF  M   +GI+P ++HYGCMVDL+GRAG L  A++F+  MP+ P+  +W  LLGAC
Sbjct: 389 GCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGAC 448

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
            IHGN+ L      +L E+D EN G +VL+SNIYA  GKW+ V  +R     + LKKTPG
Sbjct: 449 SIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPG 508

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKE 746
           WS IEVN  +  F  G + +    + + +LR + ++++   GYVP+   VL D+E +EKE
Sbjct: 509 WSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKE 568

Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
             ++ HSE+LA+AFG+   P    I++ KNLR+C DCH   K IS++ E EI+VRD +RF
Sbjct: 569 DSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRF 628

Query: 807 HHFKDGICSCGDYW 820
           H F  G CSC DYW
Sbjct: 629 HSFTHGSCSCRDYW 642



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 222/519 (42%), Gaps = 101/519 (19%)

Query: 45  SREIDFDDLFQSCTKLHHVKRLHALL---------VVSGKIKTVFSSTKLVNFYANLGD- 94
           SRE+    LF  C  L  VK++ AL+         +VSGK+        L++    L D 
Sbjct: 3   SRELHCLALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKL--------LLHCAVTLPDS 54

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK 154
           L ++R  F  I   +V+ +N++I         S A+  F +    S   PD ++F  +LK
Sbjct: 55  LHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLK 114

Query: 155 A---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD-------- 203
           A   CR L +G ++HC  +  G +  +FV  +L+ MY        ARK+FD+        
Sbjct: 115 AAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVA 174

Query: 204 -----------------------MPVRDSGSWNAMISGYCQS------------------ 222
                                  MP+R+  SWN M++GY ++                  
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDD 234

Query: 223 -------------GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
                        GN  +A     E+R EG+  + +++  +L  CA++     G ++H +
Sbjct: 235 VSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGF 294

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           + K G    + V+N LI+ Y+K G +  A  VFD M+ R  VSW ++IA          A
Sbjct: 295 VEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEA 354

Query: 330 HGFFTTMQQAGIQPDLLTLVSLT-----SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
              F  M+++ I+PD +T +S+      + +  L     SR V+ +       +E VI  
Sbjct: 355 IRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTY------GIEPVIEH 408

Query: 385 -NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
              +VD+Y + G +  A      +P+  + I W TL+   + +G    A +V + + E +
Sbjct: 409 YGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELD 468

Query: 443 EINPNQGTYVSILPA----YSHVGALRQGIKIHARVIKN 477
             N      +S + A    +  V ALR+ +  H R+ K 
Sbjct: 469 PENSGDHVLLSNIYAVAGKWKDVAALRRSMT-HQRLKKT 506


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/659 (35%), Positives = 371/659 (56%), Gaps = 4/659 (0%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K++H S++      D F+   LL     F   + +  LF      +   +N +I+G+  +
Sbjct: 30  KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNN 89

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
               E LD+   +R  G+++   T   +L  C R+ N   G+ +H  +VK G   ++   
Sbjct: 90  HLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAM 149

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
            +L+++Y+  G +  A +VF+++ ER VV+W ++ + Y  +     A   F  M + G++
Sbjct: 150 TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           PD   +V + S    + D  +   +    M      ++  +   +V++YAK G +  A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKH-MEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 461
           VF+ +  KD+++W+T+I GYA N    E IE F QM++E   + P+Q + V  L + + +
Sbjct: 269 VFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQE--NLKPDQFSIVGFLSSCASL 326

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           GAL  G    + + ++    ++F+A  L+DMY KCG +     +F ++     V  NA I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S    +G    +   F Q    G+ PD  TF+ LL  C H+GL+ +G R+F+ +   + +
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           K  ++HYGCMVDL+GRAG L  A+  I +MP+RP+A +WGALL  CR+  + +L      
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
            L  ++  N G YV +SNIY+  G+W+   EVR +   +G+KK PG+S IE+   V  F 
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFL 566

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
             +++HP  +KIY +L +L  +M+ +G+VP   FV  DVE++EKE +L  HSE+LA+AFG
Sbjct: 567 ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFG 626

Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +IS+     I++ KNLRVCGDCH   K IS+IT REI+VRD+NRFH F +G CSC DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 235/475 (49%), Gaps = 8/475 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
           L    +  +H+K++H  L+        F    L+          +S   F H  + N++ 
Sbjct: 19  LISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFL 78

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV 169
           +N++I+ +V      E +D F       GL    +TFP VLKAC    N   G  +H  V
Sbjct: 79  YNTLINGFVNNHLFHETLDLFLSIR-KHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLV 137

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K GF  DV    SLL +Y   G  N A K+F+++P R   +W A+ SGY  +G   EA+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+  +M   GV  D   +  +L  C    ++ SG  I  ++ +  ++ N FV   L+N+Y
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G M  A  VFD M E+D+V+W+++I  Y  ++ P     FF  M Q  ++PD  ++V
Sbjct: 258 AKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
              S  A L            I R   F+ ++ + NA++DMYAK G +     VF+ +  
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHE-FLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           KD++  N  I+G A+NG    +  VF   E+   I+P+  T++ +L    H G ++ G++
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLR 435

Query: 470 -IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
             +A      L   V    C+VD++G+ G +DDA  L   +P R +++ W A++S
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/726 (34%), Positives = 369/726 (50%), Gaps = 82/726 (11%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           +R  FD +S+ +VY +  MI+ Y R  R   A+  FY+  +      D  ++  ++K C 
Sbjct: 14  ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV-----KDVVSWNSMIKGCF 68

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +  D                                  +ARKLFD+MP R   SW  MI+
Sbjct: 69  DCAD--------------------------------LTMARKLFDEMPERSVVSWTTMIN 96

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G+ Q G    A  +  +M    ++                                    
Sbjct: 97  GFLQFGKIEVAEGLFYKMPFRDIA------------------------------------ 120

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
                N++I  Y   G +   LR+F +M  R+V+SW S+I   +Q      A G F  M 
Sbjct: 121 ---AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 177

Query: 338 QAGIQ--PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
             G++  P   T   + +  A  +       +H  + + G+   D  I  A++  YA   
Sbjct: 178 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF-DAYISAALITFYANCK 236

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSI 454
            +  +  VF G    +V+ W  L+TGY  N    +A++VF +MM E   + PNQ ++ S 
Sbjct: 237 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMRE--GVLPNQSSFTSA 294

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L +   + AL  G +IH   +K  L  DVFV   L+ MY +CG ++D + +F ++ + + 
Sbjct: 295 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 354

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V WN++I     HG G  AL FF QM+   V PD ITF  LL+ACSHSG+  +G+  F  
Sbjct: 355 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY 414

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             E    +  L HY CMVD+ GR+G L  A   I+NMPV+ ++ +W  LL AC +H  +E
Sbjct: 415 FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLE 474

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +   A+  + +++      YVL+SN+YA+  +W  V  +R   + RG+ K PG S I + 
Sbjct: 475 VAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 534

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
              + F +G+R+HP  ++IY +L  L  K+K LGYVPD+ F L DVE+++KE +L+ HSE
Sbjct: 535 GWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSE 594

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           RLAI FG+IS+   S I + KNLRVCGDCH+  K I++I  R+IIVRDS RFHHF DG C
Sbjct: 595 RLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRC 654

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 655 SCGDYW 660



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 48/483 (9%)

Query: 67  HAL-LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           HAL L     +K V S   ++    +  DL+ +R  FD +  R+V +W +MI+ +++ G+
Sbjct: 44  HALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGK 103

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
           +  A   FY                                    K+ F  D+    S++
Sbjct: 104 IEVAEGLFY------------------------------------KMPFR-DIAAWNSMI 126

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           + YC  G      +LF +MP R+  SW +MI G  Q G + EAL +  +M   GV + P 
Sbjct: 127 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPT 186

Query: 246 --TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T   ++  CA +  +  G+ IH ++ K G  F+ ++S  LI  YA    M  +LRVF 
Sbjct: 187 SSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH 246

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
             +  +VV W +++  Y  +     A   F  M + G+ P+  +  S  +    L     
Sbjct: 247 GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDW 306

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R +H   ++ G    DV +GN+++ MY + G +N    +F+ +  K+++SWN++I G A
Sbjct: 307 GREIHTAAVKLG-LETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 365

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC---LC 480
           Q+G    A+  F  M   + + P++ T+  +L A SH G  ++G  +     +N    + 
Sbjct: 366 QHGCGMWALAFFNQMVR-SMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVK 424

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
            D +   C+VD+ G+ G++++A  L   +P +++S+ W  ++S   +H + + A    + 
Sbjct: 425 LDHY--ACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 482

Query: 540 MLD 542
           ++D
Sbjct: 483 IID 485



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 6/267 (2%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L+   ++HA +   G     + S  L+ FYAN   +  S   F    + NV  W +++
Sbjct: 201 SALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALV 260

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGF 174
           + Y    +  +A+  F +  +  G+ P+  +F   L +C  L     G++IH + +KLG 
Sbjct: 261 TGYGLNCKHEDALKVFGEM-MREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGL 319

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           E DVFV  SL+ MY R G  N    +F  +  ++  SWN++I G  Q G  + AL   ++
Sbjct: 320 ETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQ 379

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFG 293
           M    V  D IT   +L  C+ S     G  +  Y  ++   E  L     ++++  + G
Sbjct: 380 MVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSG 439

Query: 294 MMRHALRVFDQM-MERDVVSWNSIIAA 319
            +  A  +   M ++ + + W  +++A
Sbjct: 440 KLEEAEELIRNMPVKANSMVWLVLLSA 466



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME---------------EC 441
           I+ A  VF+ +   DV  +  +ITGYA+N     A+++F  M                +C
Sbjct: 11  IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFDC 70

Query: 442 NEINPNQGTYVSILPAYSHV-------GALRQG-IKIHARVIKNCLCFDVFVATCLVDMY 493
            ++   +  +   +P  S V       G L+ G I++   +       D+     ++  Y
Sbjct: 71  ADLTMARKLFDE-MPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMI--Y 127

Query: 494 GKC--GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG--VRPDH 549
           G C  GR++D + LF ++P  + + W ++I     HG+ ++AL  FRQM+  G  V+P  
Sbjct: 128 GYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTS 187

Query: 550 ITFVSLLTACSHSGLVSEG 568
            T+  ++TAC+++  + +G
Sbjct: 188 STYCCVITACANASALYQG 206



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 20/190 (10%)

Query: 41  LENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           L N+S    F     SC  L  +   + +H   V  G    VF    L+  Y   G+L+ 
Sbjct: 285 LPNQS---SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND 341

Query: 98  SRHTFDHISYRNVYTWNSMISVYVR--CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
               F  IS +N+ +WNS+I    +  CG  + A   F+   + S + PD  TF  +L A
Sbjct: 342 GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALA---FFNQMVRSMVEPDEITFTGLLSA 398

Query: 156 CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-D 208
           C +    +K  C  L   F  +      L H  C      R G    A +L  +MPV+ +
Sbjct: 399 CSHSGMSQKGRC--LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKAN 456

Query: 209 SGSWNAMISG 218
           S  W  ++S 
Sbjct: 457 SMVWLVLLSA 466


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/529 (39%), Positives = 339/529 (64%), Gaps = 5/529 (0%)

Query: 295 MRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLT 352
           M +A +VF ++ +  +V  WN++I  Y +  + ++A   +  M+ +G ++PD  T   L 
Sbjct: 69  MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
             V ++ D R   ++H  ++R G F   + + N+++ +YA  G + SA  VF+ +P KD+
Sbjct: 129 KAVGKMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187

Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
           ++WN++I G+A+NG   EA+ ++  M+    I P+  T VS+L A + +GAL  G + H 
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMD-LKGIKPDGFTIVSLLSACAKIGALTLGKRFHV 246

Query: 473 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 532
            +IK  L  ++  +  L+D+Y +CGR+++A +LF ++   +SV W ++I    ++G G +
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKE 306

Query: 533 ALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           A+  F+ M   EG+ P  ITFV +L ACSH G+V EG  YF  M EE+ I+P ++H+GCM
Sbjct: 307 AIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCM 366

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL  RAG +  A+ +I  MP++P+  IW  LLGAC +HG+ +L  +A  ++ +++  + 
Sbjct: 367 VDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHS 426

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G YVL+SN+YA+  +W  V ++R      G++K PG S +EV N+V  F  G+++HP+ +
Sbjct: 427 GDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQND 486

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
            IY +L+ +T +++  GYVP  S V  DVEE+EKE+ L  HSE++AIAF +IS+P + PI
Sbjct: 487 MIYAKLKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPI 546

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           ++ KNL+VC DCH   K +S++  REI+VRD +RFHHFK+G CSC DYW
Sbjct: 547 RVVKNLKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 216/427 (50%), Gaps = 28/427 (6%)

Query: 52  DLFQS--CTKLHHVKRLHALLVVSG-KIKTVFSSTKLVNFYANLGD---LSFSRHTFDHI 105
           +L Q+   + L  ++++HA  + +G  I        L+ +  +L     +S++   F  I
Sbjct: 20  NLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKI 79

Query: 106 SYR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD--- 161
               NV+ WN++I  Y   G    AV  + +   +  + PD +T+P +LKA   + D   
Sbjct: 80  EKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRL 139

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+ IH  V++ GF   ++V  SLLH+Y   G    A K+FD MP +D  +WN++I+G+ +
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   EAL +  EM L+G+  D  T+ S+L  CA+   +  G   H+Y++K GL  NL  
Sbjct: 200 NGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHS 259

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAG 340
           SN L+++YA+ G +  A  +FD+M++++ VSW S+I     +     A   F  M+ + G
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEG 319

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSV-HGF----IMRRGWFMEDVIIG-NAVVDMYAKL 394
           + P  +T V +      L  C +   V  GF     M   + +E  I     +VD+ A+ 
Sbjct: 320 LLPCEITFVGI------LYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARA 373

Query: 395 GIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ-GTYV 452
           G +  A      +P++ +V+ W TL+     +G  S+  E+ +M  +  ++ PN  G YV
Sbjct: 374 GQVKKAYEYILKMPMQPNVVIWRTLLGACTVHG-DSDLAELARM--KILQLEPNHSGDYV 430

Query: 453 SILPAYS 459
            +   Y+
Sbjct: 431 LLSNMYA 437


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/726 (34%), Positives = 369/726 (50%), Gaps = 82/726 (11%)

Query: 98  SRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR 157
           +R  FD +S+ +VY +  MI+ Y R  R   A+  FY+  +      D  ++  ++K C 
Sbjct: 30  ARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV-----KDVVSWNSMIKGCF 84

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           +  D                                  +ARKLFD+MP R   SW  MI+
Sbjct: 85  DCAD--------------------------------LTMARKLFDEMPERSVVSWTTMIN 112

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           G+ Q G    A  +  +M    ++                                    
Sbjct: 113 GFLQFGKIEVAEGLFYKMPFRDIA------------------------------------ 136

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
                N++I  Y   G +   LR+F +M  R+V+SW S+I   +Q      A G F  M 
Sbjct: 137 ---AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 193

Query: 338 QAGIQ--PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
             G++  P   T   + +  A  +       +H  + + G+   D  I  A++  YA   
Sbjct: 194 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF-DAYISAALITFYANCK 252

Query: 396 IINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSI 454
            +  +  VF G    +V+ W  L+TGY  N    +A++VF +MM E   + PNQ ++ S 
Sbjct: 253 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMRE--GVLPNQSSFTSA 310

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           L +   + AL  G +IH   +K  L  DVFV   L+ MY +CG ++D + +F ++ + + 
Sbjct: 311 LNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 370

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           V WN++I     HG G  AL FF QM+   V PD ITF  LL+ACSHSG+  +G+  F  
Sbjct: 371 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY 430

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             E    +  L HY CMVD+ GR+G L  A   I+NMPV+ ++ +W  LL AC +H  +E
Sbjct: 431 FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLE 490

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +   A+  + +++      YVL+SN+YA+  +W  V  +R   + RG+ K PG S I + 
Sbjct: 491 VAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 550

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
              + F +G+R+HP  ++IY +L  L  K+K LGYVPD+ F L DVE+++KE +L+ HSE
Sbjct: 551 GWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSE 610

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           RLAI FG+IS+   S I + KNLRVCGDCH+  K I++I  R+IIVRDS RFHHF DG C
Sbjct: 611 RLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRC 670

Query: 815 SCGDYW 820
           SCGDYW
Sbjct: 671 SCGDYW 676



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 227/483 (46%), Gaps = 48/483 (9%)

Query: 67  HAL-LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           HAL L     +K V S   ++    +  DL+ +R  FD +  R+V +W +MI+ +++ G+
Sbjct: 60  HALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGK 119

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLL 185
           +  A   FY                                    K+ F  D+    S++
Sbjct: 120 IEVAEGLFY------------------------------------KMPFR-DIAAWNSMI 142

Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
           + YC  G      +LF +MP R+  SW +MI G  Q G + EAL +  +M   GV + P 
Sbjct: 143 YGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPT 202

Query: 246 --TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
             T   ++  CA +  +  G+ IH ++ K G  F+ ++S  LI  YA    M  +LRVF 
Sbjct: 203 SSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH 262

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN 363
             +  +VV W +++  Y  +     A   F  M + G+ P+  +  S  +    L     
Sbjct: 263 GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDW 322

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R +H   ++ G    DV +GN+++ MY + G +N    +F+ +  K+++SWN++I G A
Sbjct: 323 GREIHTAAVKLG-LETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCA 381

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC---LC 480
           Q+G    A+  F  M   + + P++ T+  +L A SH G  ++G  +     +N    + 
Sbjct: 382 QHGCGMWALAFFNQMVR-SMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVK 440

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
            D +   C+VD+ G+ G++++A  L   +P +++S+ W  ++S   +H + + A    + 
Sbjct: 441 LDHY--ACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 498

Query: 540 MLD 542
           ++D
Sbjct: 499 IID 501



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 6/267 (2%)

Query: 58  TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
           + L+   ++HA +   G     + S  L+ FYAN   +  S   F    + NV  W +++
Sbjct: 217 SALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALV 276

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGF 174
           + Y    +  +A+  F +  +  G+ P+  +F   L +C  L     G++IH + +KLG 
Sbjct: 277 TGYGLNCKHEDALKVFGEM-MREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGL 335

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           E DVFV  SL+ MY R G  N    +F  +  ++  SWN++I G  Q G  + AL   ++
Sbjct: 336 ETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQ 395

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFG 293
           M    V  D IT   +L  C+ S     G  +  Y  ++   E  L     ++++  + G
Sbjct: 396 MVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSG 455

Query: 294 MMRHALRVFDQM-MERDVVSWNSIIAA 319
            +  A  +   M ++ + + W  +++A
Sbjct: 456 KLEEAEELIRNMPVKANSMVWLVLLSA 482



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 20/190 (10%)

Query: 41  LENESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF 97
           L N+S    F     SC  L  +   + +H   V  G    VF    L+  Y   G+L+ 
Sbjct: 301 LPNQS---SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLND 357

Query: 98  SRHTFDHISYRNVYTWNSMISVYVR--CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA 155
               F  IS +N+ +WNS+I    +  CG  + A   F+   + S + PD  TF  +L A
Sbjct: 358 GVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALA---FFNQMVRSMVEPDEITFTGLLSA 414

Query: 156 CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-D 208
           C +    +K  C  L   F  +      L H  C      R G    A +L  +MPV+ +
Sbjct: 415 CSHSGMSQKGRC--LFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKAN 472

Query: 209 SGSWNAMISG 218
           S  W  ++S 
Sbjct: 473 SMVWLVLLSA 482


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/720 (33%), Positives = 392/720 (54%), Gaps = 43/720 (5%)

Query: 143 RPDFY-----TFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
           RP F      T    L  C++L   K++H  +L+      +      L         + A
Sbjct: 7   RPSFAVSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYA 66

Query: 198 RKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
             LF  + P+ +S  +N+++    +SG     +     +R  G   D I+   IL   ++
Sbjct: 67  LNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSK 126

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G+ +H +  K     + FV   L++MYA  G + +A  VFD+M +RDVV+WN++
Sbjct: 127 VSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTM 186

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR--- 373
           I  Y +      A   F  M+ + + PD + L ++ S   +  + R +R+++ F++    
Sbjct: 187 IERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDV 246

Query: 374 ---------------------------RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
                                      R   + ++ +  A+V  Y+K G ++ A  +F+ 
Sbjct: 247 RMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQ 306

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
             +KD++ W T+I+ YA++    EA+ VF+ M  C+ I P+  T +S++ A  ++G L +
Sbjct: 307 TEMKDLVCWTTMISAYAESDHPQEALRVFEEMC-CSGIKPDVVTMLSVISACVNLGTLDK 365

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
              +H     N L   + +   L++MY KCG +D A  +F ++P  + V W+++I+   +
Sbjct: 366 AKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           HG+   +L+ F QM  E V P+ +TFV +L  CSHSGLV EG++ F  M +E+ I P ++
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HYGCMVDLFGRA  L  A   I++MP+ P+  IWG+L+ ACR+HG +ELG +A+ R+ ++
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL 545

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
           + ++ G  VLMSNIYA   +W+ V  +R +   + + K  G S I++N K   F  G++ 
Sbjct: 546 EPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKR 605

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSP 766
           H +  +IY +L  + +K+K  GYVPD   VL DVEE+EK+ ++  HSE+LA+ FG+++  
Sbjct: 606 HKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKE 665

Query: 767 PKSP------IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +        I+I KNLRVC DCH + K +S++ E EIIVRD  RFH +KDG+CSC DYW
Sbjct: 666 KEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 278/531 (52%), Gaps = 44/531 (8%)

Query: 57  CTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWNS 115
           C  L+H+K+LHA ++ +     + S    ++F ++  +LS++ + F  IS       +NS
Sbjct: 25  CKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIVFNS 84

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           ++    R G    A   FYQ     G R D  +FPP+LKA      L +G ++H    K+
Sbjct: 85  LLRDLSRSGE-PRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKI 143

Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
               D FV   L+ MY   G  N AR +FD+M  RD  +WN MI  YC+ G   EA  + 
Sbjct: 144 ATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLF 203

Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH------------------- 273
           +EM+   V  D + + +I+  C R+ N+     I+ +++++                   
Sbjct: 204 EEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGA 263

Query: 274 -----GLEF-------NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
                 +EF       NLFVS  +++ Y+K G +  A  +FDQ   +D+V W ++I+AY 
Sbjct: 264 GCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYA 323

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           +S+ P  A   F  M  +GI+PD++T++S+ S    L     ++ VH +    G  +E V
Sbjct: 324 ESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNG--LESV 381

Query: 382 I-IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           + I NA+++MYAK G +++A  VFE +P ++V+SW+++I  +A +G AS+++ +F  M++
Sbjct: 382 LPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQ 441

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRI 499
            N + PN+ T+V +L   SH G + +G KI A +     +   +    C+VD++G+   +
Sbjct: 442 EN-VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLL 500

Query: 500 DDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
            +A+ +   +P + +V  W +++S   +HG+ +      +++L   + PDH
Sbjct: 501 REALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILK--LEPDH 549



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 189/417 (45%), Gaps = 39/417 (9%)

Query: 48  IDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I F  + ++ +K   L     LH        +   F  T L++ YA  G ++++R+ FD 
Sbjct: 115 ISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDE 174

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVD 161
           +S R+V TWN+MI  Y R G L EA   F +    S + PD      ++ AC    N+  
Sbjct: 175 MSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMK-DSNVMPDEMILCNIVSACGRTGNMRY 233

Query: 162 GKKIH------------------------CSVLKLGFEW-------DVFVAASLLHMYCR 190
            + I+                           + +  E+       ++FV+ +++  Y +
Sbjct: 234 NRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSK 293

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
            G  + AR +FD   ++D   W  MIS Y +S +  EAL + +EM   G+  D +T+ S+
Sbjct: 294 AGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSV 353

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           +  C     +     +H Y   +GLE  L + N LINMYAK G +  A  VF++M  R+V
Sbjct: 354 ISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNV 413

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
           VSW+S+I A+    +   +   F  M+Q  ++P+ +T V +    +        + +   
Sbjct: 414 VSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 473

Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG 426
           +         +     +VD++ +  ++  A  V E +P+  +V+ W +L++    +G
Sbjct: 474 MTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHG 530


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/687 (35%), Positives = 379/687 (55%), Gaps = 9/687 (1%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F DL   CT+   L   K +HA L+ +G   +V+ +  LVN YA  G +  ++  F+ I+
Sbjct: 13  FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 72

Query: 107 YRNVYTWNSMISVYVRCGRLSEA-VDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDG 162
            ++V +WN +I+ Y + G +  + V   +Q        P+ +TF  V  A  +      G
Sbjct: 73  NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 132

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
            + H   +K    +DVFV +SL++MYC+ G    ARK+FD +P R++ SW  +ISGY   
Sbjct: 133 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
             A EA ++   MR E  + D     S+L      D +  G  IH   +K+GL     V 
Sbjct: 193 RMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 252

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L+ MY K G +  AL+ F+   ++D ++W+++I  Y Q+ D   A   F  M   G +
Sbjct: 253 NALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P   T V + +  + +      + +HG+ ++ G+  + +    A+VDMYAK G +  A  
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQ-IYFMTALVDMYAKCGSLVDARK 371

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F+ L   D++ W ++I+GYAQNG    A+ ++  M+    I P++ T  S+L A S + 
Sbjct: 372 GFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQ-MERIMPHELTMASVLRACSSLA 430

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL QG +IHA+ IK     +V + + L  MY KCG ++D   +F ++P    + WNA+IS
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
               +G+G KAL  F ++     +PD++TFV++L+ACSH GLV  G+ YF MM +EFGI 
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P ++HY CMVD+  RAG L     FI++  +     +W  LLGACR + N ELGA A ++
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E+ S+    Y+L+S+IY  +G+ + V+ VR L + RG+ K PG S IE+ ++V +F  
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGY 729
           G++ HP+  KI  ELR L   MK   Y
Sbjct: 671 GDQIHPQIVKICSELRRLRDHMKDECY 697



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 2/119 (1%)

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P   ++V +L   +    L++G  IHA++++      V++   LV++Y KCG I  A  +
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKA--LNFFRQMLDEGVRPDHITFVSLLTACSHS 562
           F  +     V WN +I+ +   G    +  +  F++M  E   P+  TF  + TA S S
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSS 126


>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g40405-like [Vitis vinifera]
          Length = 615

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 231/559 (41%), Positives = 340/559 (60%), Gaps = 35/559 (6%)

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAG-IQPDLLTLVSLT 352
           + ++ +V D      + ++NS+I A+ +S+ P  +  F++  +  AG + PD  T   L 
Sbjct: 59  LHYSNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLV 118

Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN-------------- 398
              AQL       SVHG  ++ G F  D  + + ++ MYA+LG ++              
Sbjct: 119 RTSAQLLAHGTGSSVHGAAVKYG-FEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDL 177

Query: 399 -------SACA----------VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
                  SACA          +F+ +  KD I+WN +I+GY Q G + EA+ +F +M+  
Sbjct: 178 VCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQR- 236

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             +  N+ + VS+L A SH+GAL QG   HA + +N L   + + T L+DMY KCG ++ 
Sbjct: 237 EGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNK 296

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           AM +F+ +   +   W++ I    ++G G+K L  F  M  + V+P+ ITFVS+L  CS 
Sbjct: 297 AMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSV 356

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
            GLV EG+++F  M + +GI+P L+HYGCMVDL+GRAGHL  A NFI +MPVRP    WG
Sbjct: 357 VGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWG 416

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALL AC+I+ NME+G +AS ++ E++++N G YVL+SNIYA+   W+ V  VR     +G
Sbjct: 417 ALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKG 476

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
           ++K PG S IEV  +V  F+ G+++HP+Y +I   L  ++ ++K  GYV + + V  D+E
Sbjct: 477 VRKQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIE 536

Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
           E+EKE  L  HSE++AIAFG+IS  P  PI+I KNLRVC DCH+ TK IS+   REI+VR
Sbjct: 537 EEEKEDALCMHSEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVR 596

Query: 802 DSNRFHHFKDGICSCGDYW 820
           D NRFHHF+DG CSC  YW
Sbjct: 597 DRNRFHHFRDGECSCKGYW 615



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 46/411 (11%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           + + CT L  +K++H  L+++G +       + V   A  N  +L +S    D+     +
Sbjct: 15  MVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTL 74

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSG-LRPDFYTFPPVLKACRNLV---DGKKIH 166
           +T+NSMI  + +      +   + +   ++G L PD YTF  +++    L+    G  +H
Sbjct: 75  FTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVH 134

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFG-----------------------------LANV- 196
            + +K GFE+D  V + L++MY   G                             + +V 
Sbjct: 135 GAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVG 194

Query: 197 -ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            ARKLFD M  +D  +WNAMISGY Q G + EAL + + M+ EGV ++ +++ S+L  C+
Sbjct: 195 FARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACS 254

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G   H YI ++ L   L +   LI+MYAK G M  A+ VF  M E++V +W+S
Sbjct: 255 HLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSS 314

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL---TSIVAQLNDCRNSRSVHGFIM 372
            I     +         F+ M+Q  +QP+ +T VS+    S+V  + + R     H   M
Sbjct: 315 AIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRK----HFESM 370

Query: 373 RRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKD-VISWNTLITG 421
            + + +E  +     +VD+Y + G ++ A      +PV+  V +W  L+  
Sbjct: 371 SKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNA 421


>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
          Length = 662

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/538 (41%), Positives = 320/538 (59%), Gaps = 8/538 (1%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++ +   G    A R+F  M  RDVVSWN++++   +S     A   F  M      
Sbjct: 133 NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP----- 187

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
             +   VS  ++V+    C    S      R      D ++  A+V  Y  +G +  A  
Sbjct: 188 --VRNSVSWNAMVSGFA-CSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIE 244

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            FE +PV++++SWN ++ GY +N  A +A+ +F+ M     + PN  T  S+L   S++ 
Sbjct: 245 YFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLS 304

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G +IH   +K  L  ++ V T LV MY KCG +  A  LF ++     V WNA+IS
Sbjct: 305 ALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMIS 364

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G +A+N F +M DEGV P+ ITFV++LTAC H+GL   G R F  MQE +GI+
Sbjct: 365 GYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIE 424

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P + HY CMVDL  RAG L  A + I++MP  P  S +G LL ACR++ N+E   +A+ +
Sbjct: 425 PRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGK 484

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E D ++ G YV ++NIYA   +W+ V  VR   +D  + KTPG+S IE+   +  F +
Sbjct: 485 LIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRS 544

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
            +R HP+   I+++L  L  +MK++GYVPD  FVL DV+E  K  +L  HSE+LAI+FG+
Sbjct: 545 NDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGL 604

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ P   ++IFKNLRVCGDCHN  K IS+I +REII+RD+ RFHHF+ G CSCGDYW
Sbjct: 605 ISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 179/368 (48%), Gaps = 57/368 (15%)

Query: 184 LLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           LL  Y R  G    AR LFD +P  D+ S+N ++S +  SG+A  A  +   M +     
Sbjct: 103 LLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVR---- 158

Query: 243 DPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVS------------------- 282
           D ++  +++   ++S  +     + L + V++ + +N  VS                   
Sbjct: 159 DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAP 218

Query: 283 --------NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
                     +++ Y   G +  A+  F+ M  R++VSWN+++A Y +++    A   F 
Sbjct: 219 EKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFR 278

Query: 335 TM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           TM ++A +QP+  TL S+    + L+     + +H + M+      ++ +G ++V MY K
Sbjct: 279 TMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP-LSRNLTVGTSLVSMYCK 337

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G ++SAC +F  +  +DV++WN +I+GYAQ+G   EAI +F+ M++   + PN  T+V+
Sbjct: 338 CGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKD-EGVEPNWITFVA 396

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFD-----------VFVATCLVDMYGKCGRIDDA 502
           +L A  H G    GI+          CF+           V   +C+VD+  + G+++ A
Sbjct: 397 VLTACIHTGLCDFGIR----------CFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERA 446

Query: 503 MSLFYQVP 510
           + L   +P
Sbjct: 447 VDLIRSMP 454



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 6/270 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GD   +R  F  +  R+V +WN+M+S   + G + EA   F    + + +   +      
Sbjct: 143 GDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSV--SWNAMVSG 200

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
               R++   ++   +  + G   D  +  +++  Y   G    A + F+ MPVR+  SW
Sbjct: 201 FACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSW 257

Query: 213 NAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           NA+++GY ++ +A +AL +   M R   V  +  T++S+L  C+    +  G  IH + +
Sbjct: 258 NAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCM 317

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K  L  NL V  +L++MY K G +  A ++F +M  RDVV+WN++I+ Y Q  D   A  
Sbjct: 318 KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAIN 377

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
            F  M+  G++P+ +T V++ +       C
Sbjct: 378 LFERMKDEGVEPNWITFVAVLTACIHTGLC 407



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 100/175 (57%), Gaps = 3/175 (1%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T +V+ Y ++G++  +   F+ +  RN+ +WN++++ YV+     +A+  F      + +
Sbjct: 227 TAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 286

Query: 143 RPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           +P+  T   VL  C NL     GK+IH   +KL    ++ V  SL+ MYC+ G  + A K
Sbjct: 287 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 346

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
           LF +M  RD  +WNAMISGY Q G+  EA+++ + M+ EGV  + IT  ++L  C
Sbjct: 347 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 401



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 11/254 (4%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D +  N ++  +   G  + A  +F  +PV+DV+SWNT+++G +++G   EA  VF  M 
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             N ++ N    VS       + A  +  +            D  + T +V  Y   G +
Sbjct: 188 VRNSVSWN--AMVSGFACSRDMSAAEEWFRNAPEK------GDAVLWTAMVSGYMDIGNV 239

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTA 558
             A+  F  +P  + V WNA+++ +  +   D AL  FR M+ E  V+P+  T  S+L  
Sbjct: 240 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 299

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS+   +  G++  H    +  +  +L     +V ++ + G L  A      M  R D  
Sbjct: 300 CSNLSALGFGKQ-IHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVV 357

Query: 619 IWGALLGACRIHGN 632
            W A++     HG+
Sbjct: 358 AWNAMISGYAQHGD 371



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 488 CLVDMYGKC-GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           CL+  Y +  GR+ DA  LF ++P   +V +N ++SCH   G  D A   F  M    VR
Sbjct: 102 CLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASM---PVR 158

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
            D +++ ++++  S SG V E +  F  M     +      +  MV  F  +  +  A  
Sbjct: 159 -DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVS-----WNAMVSGFACSRDMSAAEE 212

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           + +N P + DA +W A+     + G M++G V
Sbjct: 213 WFRNAPEKGDAVLWTAM-----VSGYMDIGNV 239



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 108/280 (38%), Gaps = 50/280 (17%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T LV+ Y   GDLS +   F  +  R+V  WN+MIS Y + G   EA++ F +     G+
Sbjct: 329 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK-DEGV 387

Query: 143 RPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
            P++ TF  VL AC        IH  +   G               C  G+    ++L+ 
Sbjct: 388 EPNWITFVAVLTAC--------IHTGLCDFGIR-------------CFEGM----QELYG 422

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI-L 261
             P  D   ++ M+   C++G    A+D++  M  E     P    ++L  C    N+  
Sbjct: 423 IEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMPFEP---HPSAYGTLLAACRVYKNLEF 477

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV-----SWNSI 316
           + L     I K       +V   L N+YA         RV   M +  VV     SW  I
Sbjct: 478 AELAAGKLIEKDPQSAGAYV--QLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEI 535

Query: 317 IAAYEQ--SNDPITAHGFF---------TTMQQAGIQPDL 345
                +  SND +    +            M+  G  PDL
Sbjct: 536 KGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 575


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/543 (41%), Positives = 324/543 (59%), Gaps = 2/543 (0%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           N+   N LI    K G +  A  +FD+M  R+V +WN+++A          +  FF  M+
Sbjct: 107 NVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMR 166

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           + G+ PD   L S+    A L D  + R VH +++R G    D+ +GN++  MY + G +
Sbjct: 167 REGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSG-MDSDMCVGNSLAHMYMRCGCL 225

Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
               AV   LP   ++S+NT I G  QNG +  A+E F MM    E+ P+  T+VS +  
Sbjct: 226 AEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGV-EVAPDVVTFVSAISC 284

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
            S + AL QG ++HA+VIK  +   V V T LV MY +CG + D+  ++           
Sbjct: 285 CSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLL 344

Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQE 577
           +A+IS  G HGQG KA+  F+QM++ G  P+ +TF++LL ACSHSGL  EG  +F +M +
Sbjct: 345 SAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTK 404

Query: 578 EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGA 637
            +G +P +KHY C+VDL GR+G L  A   I +MPVR D  IW  LL AC+   N ++  
Sbjct: 405 TYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAE 464

Query: 638 VASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKV 697
             ++R+ E D  +   YVL+SNI A   +W  V EVR + R++ ++K PG S +E   +V
Sbjct: 465 RIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQV 524

Query: 698 DIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLA 757
             F TG+++HP+  +I + L+ +  K++  GY PD + V  D+E++EKE  LT HSE+LA
Sbjct: 525 HQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLA 584

Query: 758 IAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
           IAF  ++ P   PI++ KNLRVC DCH   K ISQ+T REI+VRD +RFHHF+DG CSCG
Sbjct: 585 IAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCG 644

Query: 818 DYW 820
           DYW
Sbjct: 645 DYW 647



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 45/435 (10%)

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           GRL +A+   ++  L S    D   F  + +ACR +   +++H      G   D F   +
Sbjct: 27  GRLKDALHHPFRGVLWS----DASLFSHIFRACRAIPLLRQLHAFAATSGAAADRFTTNN 82

Query: 184 LLHMYCRFG-------------LANV------------------ARKLFDDMPVRDSGSW 212
           LL  Y   G               NV                  AR+LFD MP R+  +W
Sbjct: 83  LLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATW 142

Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
           NAM++G    G   ++L     MR EG+  D   + S+   CA   +++SG  +H Y+V+
Sbjct: 143 NAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVR 202

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G++ ++ V N+L +MY + G +     V   +    +VS+N+ IA   Q+ D   A  +
Sbjct: 203 SGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEY 262

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMY 391
           F+ M+   + PD++T VS  S  + L      + VH  +++ G  ++ V+ +  ++V MY
Sbjct: 263 FSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAG--VDKVVPVITSLVHMY 320

Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGT 450
           ++ G +  +  V++G    D+   + +I+    +G   +A+E+F QMM    E  PN+ T
Sbjct: 321 SRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAE--PNEVT 378

Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQ 508
           ++++L A SH G   +G++    + K    F   V    C+VD+ G+ G +D+A +L   
Sbjct: 379 FLALLYACSHSGLKDEGLEFFELMTKT-YGFQPSVKHYNCIVDLLGRSGCLDEAEALILS 437

Query: 509 VP-RSSSVPWNAIIS 522
           +P R+  V W  ++S
Sbjct: 438 MPVRADGVIWKTLLS 452



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 36/407 (8%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F  +F++C  +  +++LHA    SG     F++  L+  YA+LGDL  +RH F+ IS RN
Sbjct: 48  FSHIFRACRAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRN 107

Query: 110 VY-------------------------------TWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V                                TWN+M++     G L E    F+    
Sbjct: 108 VMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVG-LDEDSLQFFLAMR 166

Query: 139 TSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             G+ PD +    V + C  L+D   G+++H  V++ G + D+ V  SL HMY R G   
Sbjct: 167 REGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLA 226

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
               +   +P     S+N  I+G  Q+G++  AL+    MR   V+ D +T  S +  C+
Sbjct: 227 EGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCS 286

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
               +  G  +H  ++K G++  + V  +L++MY++ G +  + RV+D     D+   ++
Sbjct: 287 DLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSA 346

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I+A         A   F  M   G +P+ +T ++L    +              + +  
Sbjct: 347 MISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTY 406

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
            F   V   N +VD+  + G ++ A A+   +PV+ D + W TL++ 
Sbjct: 407 GFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453


>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 613

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/538 (41%), Positives = 320/538 (59%), Gaps = 8/538 (1%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++ +   G    A R+F  M  RDVVSWN++++   +S     A   F  M      
Sbjct: 84  NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP----- 138

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
             +   VS  ++V+    C    S      R      D ++  A+V  Y  +G +  A  
Sbjct: 139 --VRNSVSWNAMVSGFA-CSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIE 195

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            FE +PV++++SWN ++ GY +N  A +A+ +F+ M     + PN  T  S+L   S++ 
Sbjct: 196 YFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLS 255

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G +IH   +K  L  ++ V T LV MY KCG +  A  LF ++     V WNA+IS
Sbjct: 256 ALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMIS 315

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G +A+N F +M DEGV P+ ITFV++LTAC H+GL   G R F  MQE +GI+
Sbjct: 316 GYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIE 375

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P + HY CMVDL  RAG L  A + I++MP  P  S +G LL ACR++ N+E   +A+ +
Sbjct: 376 PRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGK 435

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E D ++ G YV ++NIYA   +W+ V  VR   +D  + KTPG+S IE+   +  F +
Sbjct: 436 LIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRS 495

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
            +R HP+   I+++L  L  +MK++GYVPD  FVL DV+E  K  +L  HSE+LAI+FG+
Sbjct: 496 NDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGL 555

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ P   ++IFKNLRVCGDCHN  K IS+I +REII+RD+ RFHHF+ G CSCGDYW
Sbjct: 556 ISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 179/368 (48%), Gaps = 57/368 (15%)

Query: 184 LLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           LL  Y R  G    AR LFD +P  D+ S+N ++S +  SG+A  A  +   M +     
Sbjct: 54  LLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVR---- 109

Query: 243 DPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVS------------------- 282
           D ++  +++   ++S  +     + L + V++ + +N  VS                   
Sbjct: 110 DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAP 169

Query: 283 --------NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT 334
                     +++ Y   G +  A+  F+ M  R++VSWN+++A Y +++    A   F 
Sbjct: 170 EKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFR 229

Query: 335 TM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
           TM ++A +QP+  TL S+    + L+     + +H + M+      ++ +G ++V MY K
Sbjct: 230 TMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP-LSRNLTVGTSLVSMYCK 288

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G ++SAC +F  +  +DV++WN +I+GYAQ+G   EAI +F+ M++   + PN  T+V+
Sbjct: 289 CGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKD-EGVEPNWITFVA 347

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFD-----------VFVATCLVDMYGKCGRIDDA 502
           +L A  H G    GI+          CF+           V   +C+VD+  + G+++ A
Sbjct: 348 VLTACIHTGLCDFGIR----------CFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERA 397

Query: 503 MSLFYQVP 510
           + L   +P
Sbjct: 398 VDLIRSMP 405



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 135/270 (50%), Gaps = 6/270 (2%)

Query: 93  GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPV 152
           GD   +R  F  +  R+V +WN+M+S   + G + EA   F    + + +   +      
Sbjct: 94  GDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSV--SWNAMVSG 151

Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSW 212
               R++   ++   +  + G   D  +  +++  Y   G    A + F+ MPVR+  SW
Sbjct: 152 FACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSW 208

Query: 213 NAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
           NA+++GY ++ +A +AL +   M R   V  +  T++S+L  C+    +  G  IH + +
Sbjct: 209 NAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCM 268

Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
           K  L  NL V  +L++MY K G +  A ++F +M  RDVV+WN++I+ Y Q  D   A  
Sbjct: 269 KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAIN 328

Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
            F  M+  G++P+ +T V++ +       C
Sbjct: 329 LFERMKDEGVEPNWITFVAVLTACIHTGLC 358



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 100/175 (57%), Gaps = 3/175 (1%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T +V+ Y ++G++  +   F+ +  RN+ +WN++++ YV+     +A+  F      + +
Sbjct: 178 TAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANV 237

Query: 143 RPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
           +P+  T   VL  C NL     GK+IH   +KL    ++ V  SL+ MYC+ G  + A K
Sbjct: 238 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 297

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
           LF +M  RD  +WNAMISGY Q G+  EA+++ + M+ EGV  + IT  ++L  C
Sbjct: 298 LFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 352



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 11/254 (4%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D +  N ++  +   G  + A  +F  +PV+DV+SWNT+++G +++G   EA  VF  M 
Sbjct: 79  DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             N ++ N    VS       + A  +  +            D  + T +V  Y   G +
Sbjct: 139 VRNSVSWN--AMVSGFACSRDMSAAEEWFRNAPEK------GDAVLWTAMVSGYMDIGNV 190

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTA 558
             A+  F  +P  + V WNA+++ +  +   D AL  FR M+ E  V+P+  T  S+L  
Sbjct: 191 VKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLG 250

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS+   +  G++  H    +  +  +L     +V ++ + G L  A      M  R D  
Sbjct: 251 CSNLSALGFGKQ-IHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR-DVV 308

Query: 619 IWGALLGACRIHGN 632
            W A++     HG+
Sbjct: 309 AWNAMISGYAQHGD 322



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 488 CLVDMYGKC-GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           CL+  Y +  GR+ DA  LF ++P   +V +N ++SCH   G  D A   F  M    VR
Sbjct: 53  CLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASM---PVR 109

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
            D +++ ++++  S SG V E +  F  M     +      +  MV  F  +  +  A  
Sbjct: 110 -DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVS-----WNAMVSGFACSRDMSAAEE 163

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
           + +N P + DA +W A+     + G M++G V
Sbjct: 164 WFRNAPEKGDAVLWTAM-----VSGYMDIGNV 190



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 108/280 (38%), Gaps = 50/280 (17%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T LV+ Y   GDLS +   F  +  R+V  WN+MIS Y + G   EA++ F +     G+
Sbjct: 280 TSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK-DEGV 338

Query: 143 RPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
            P++ TF  VL AC        IH  +   G               C  G+    ++L+ 
Sbjct: 339 EPNWITFVAVLTAC--------IHTGLCDFGIR-------------CFEGM----QELYG 373

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI-L 261
             P  D   ++ M+   C++G    A+D++  M  E     P    ++L  C    N+  
Sbjct: 374 IEPRVD--HYSCMVDLLCRAGKLERAVDLIRSMPFEP---HPSAYGTLLAACRVYKNLEF 428

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV-----SWNSI 316
           + L     I K       +V   L N+YA         RV   M +  VV     SW  I
Sbjct: 429 AELAAGKLIEKDPQSAGAYV--QLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEI 486

Query: 317 IAAYEQ--SNDPITAHGFF---------TTMQQAGIQPDL 345
                +  SND +    +            M+  G  PDL
Sbjct: 487 KGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDL 526


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 267/873 (30%), Positives = 424/873 (48%), Gaps = 148/873 (16%)

Query: 50  FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
           F D F+ C      ++LHA L++SG   ++F    L++ Y+N G +  +   F   ++ N
Sbjct: 10  FYDAFKLCGSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHAN 69

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQF----------------------------TLTSG 141
           ++TWN+M+  +   GR+ EA + F +                             T  S 
Sbjct: 70  IFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSM 129

Query: 142 LRP--------DFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCR 190
           LR         D +++   +KAC  L   +   ++H  V+KL       +  SL+ MY +
Sbjct: 130 LRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIK 189

Query: 191 FGLANVARKLFDD-------------------------------MPVRDSGSWNAMISGY 219
            G   +A  +F +                               MP RD  SWN +IS +
Sbjct: 190 CGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVF 249

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            Q G+ +  L    EM   G   + +T  S+L  CA   ++  G  +H  I++     + 
Sbjct: 250 SQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDA 309

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           F+ + LI+MYAK G +  A RVF+ + E++ VSW  +I+   Q      A   F  M+QA
Sbjct: 310 FLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQA 369

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIIN 398
            +  D  TL ++  + +  N       +HG+ ++ G  M+  + +GNA++ MYA+ G   
Sbjct: 370 SVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSG--MDSFVPVGNAIITMYARCGDTE 427

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN---------------- 442
            A   F  +P++D ISW  +IT ++QNG    A + F MM E N                
Sbjct: 428 KASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGF 487

Query: 443 --------------EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
                          + P+  T+ + + A + +  ++ G ++ + V K  L  DV VA  
Sbjct: 488 SEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANS 547

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
           +V MY +CG+I +A  +F  +   + + WNA+++    +G G+KA+  +  ML    +PD
Sbjct: 548 IVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPD 607

Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
           HI++V++L+                                   DL GRAG L  A N I
Sbjct: 608 HISYVAVLS-----------------------------------DLLGRAGLLDQAKNLI 632

Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
             MP +P+A++WGALLGACRIH +  L   A+ +L E++ E+ G YVL++NIYA  G+ E
Sbjct: 633 DGMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELE 692

Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
            V ++R L + +G++K+PG S IEV+N+V +F     +HP+  ++Y +L  +  K++  G
Sbjct: 693 NVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTG 752

Query: 729 -YVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
            YV     ++      +K      HSE+LA AFG++S PP  PIQ+ KNLRVC DCH   
Sbjct: 753 RYVS----IVSCAHRSQKY-----HSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVI 803

Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           K +S +T RE+I+RD  RFHHFKDG CSC DYW
Sbjct: 804 KLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 32/216 (14%)

Query: 48  IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSS-----TKLVNFYANLGDLSFSRHTF 102
           + F    ++C  L  +K      VVS   K   SS       +V  Y+  G +  +R  F
Sbjct: 508 VTFATSIRACADLATIKL--GTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVF 565

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK-------- 154
           D I  +N+ +WN+M++ + + G  ++A++  Y+  L +  +PD  ++  VL         
Sbjct: 566 DSIHVKNLISWNAMMAAFAQNGLGNKAIET-YEDMLRTECKPDHISYVAVLSDLLGRAGL 624

Query: 155 --ACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG----LANVARKLFDDMPVRD 208
               +NL+DG         + F+ +  V  +LL   CR      LA  A K   ++ V D
Sbjct: 625 LDQAKNLIDG---------MPFKPNATVWGALLGA-CRIHHDSILAETAAKKLMELNVED 674

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           SG +  + + Y +SG      D+   M+++G+   P
Sbjct: 675 SGGYVLLANIYAESGELENVADMRKLMKVKGIRKSP 710


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/629 (36%), Positives = 341/629 (54%), Gaps = 76/629 (12%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM--ERDVVSWNSIIAAYEQS 323
           +H      GL  + FV+++L++ Y + G   +A  +FD M   +R VV W++++AA+   
Sbjct: 39  LHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAAR 98

Query: 324 NDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLNDCRNS------------------ 364
            D   A      M++  G++P+++T   L S + +    R++                  
Sbjct: 99  GDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDAT 158

Query: 365 ------------------RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
                             + +HG+ ++ G    D  +  A++DMY K G       VF+ 
Sbjct: 159 GVSCALSAVGDVGLVSVGQQLHGYAVKAG-CRADACVVTALIDMYGKCGQAAEVVRVFDE 217

Query: 407 LPVKDVISWNTLITGYA-----------------------------------QNGLASEA 431
               DV S N LI G +                                   QNG   EA
Sbjct: 218 SSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEA 277

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           +E F+ M+      PN  T   +LPA+++V AL  G   H   ++     DV+V++ LVD
Sbjct: 278 VEFFREMQ-AQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVD 336

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
           MY KCGR+ DA  +F  +   + V WNA+I  + ++G+   A+  F  ML    +PD +T
Sbjct: 337 MYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVT 396

Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
           F  LL AC+ +GL  EG+ YF  M  E+G+ P ++HY CMV L GRAG L  A++ I +M
Sbjct: 397 FTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDM 456

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
           P  PDA IWG+LLG+CR+HGN++L  VA+++LF ++ EN G YVL+SNIYA+   W+ V+
Sbjct: 457 PFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVN 516

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            VR + +D GLKK  G S IE+ NKV +   G+ +HP    I +++  L  +M+ LG+VP
Sbjct: 517 RVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVP 576

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
              FVL DVEE EK+ IL  HSE+LA+A G+IS+ P + +++ KNLR+CGDCH   KFIS
Sbjct: 577 STDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFIS 636

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
               REI VRD+NRFHHF  G CSCGD+W
Sbjct: 637 SFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 205/478 (42%), Gaps = 80/478 (16%)

Query: 133 FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
            + F       PD +  P   K+C  L   + +H      G   D FVA+SLLH Y R G
Sbjct: 7   LHHFLRHVSFPPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLG 66

Query: 193 LANVARKLFDDMPV--------------------------------RDSG------SWNA 214
               AR LFD MP                                 RD G      +WN 
Sbjct: 67  TTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNG 126

Query: 215 MISGYCQSGNAVEALDILDEMRLEGV-SMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           ++SG  +SG A +A+  L  M  EG+   D   V+  L        +  G  +H Y VK 
Sbjct: 127 LVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKA 186

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQM---------------------------- 305
           G   +  V   LI+MY K G     +RVFD+                             
Sbjct: 187 GCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLF 246

Query: 306 -------MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
                  +E +VVSW SI+A   Q+   + A  FF  MQ  G +P+ +T+  +    A +
Sbjct: 247 KEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANV 306

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
               + RS H F +R+G F+ DV + +A+VDMYAK G +  A  +F+ +  ++V+SWN +
Sbjct: 307 AALMHGRSAHCFALRKG-FLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAM 365

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           I GYA  G A  A+ +F  M +C +  P+  T+  +L A +  G   +G + + + + N 
Sbjct: 366 IGGYAMYGEAVNAVWMFHSMLKCKQ-KPDMVTFTCLLAACTQAGLTEEG-RHYFKEMHNE 423

Query: 479 LCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
                 +    C+V + G+ G++D+A  L   +P    +  W +++    +HG  D A
Sbjct: 424 YGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 200/487 (41%), Gaps = 87/487 (17%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI-------- 105
           F+SC  L   + LHA+  VSG  +  F ++ L++ Y  LG    +R  FD +        
Sbjct: 27  FKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVV 86

Query: 106 -----------------SYR-------------NVYTWNSMISVYVRCGRLSEAVDCFYQ 135
                            ++R             NV TWN ++S   R GR  +AV     
Sbjct: 87  GWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALAT 146

Query: 136 FTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                 LRPD       L A  +  LV  G+++H   +K G   D  V  +L+ MY + G
Sbjct: 147 MHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCG 206

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGY--------------------------------- 219
            A    ++FD+    D  S NA+I+G                                  
Sbjct: 207 QAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVA 266

Query: 220 --CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
              Q+G  +EA++   EM+ +G   + +T+  +LP  A    ++ G   H + ++ G   
Sbjct: 267 CCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLH 326

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           +++VS+ L++MYAK G ++ A  +FD M+ R+VVSWN++I  Y    + + A   F +M 
Sbjct: 327 DVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSML 386

Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
           +   +PD++T   L +   Q       R     +         +     +V +  + G +
Sbjct: 387 KCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKL 446

Query: 398 NSACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIE-VFQMMEECNEINPNQGTYV 452
           + A  +   +P + D   W +L+     +G   LA  A E +F +  E      N G YV
Sbjct: 447 DEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPE------NAGNYV 500

Query: 453 SILPAYS 459
            +   Y+
Sbjct: 501 LLSNIYA 507



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 11/279 (3%)

Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-NAV 387
           A       + +G+  D     SL     +L    N+R++   + R     +  ++G +A+
Sbjct: 36  ARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRP----QRTVVGWSAL 91

Query: 388 VDMYAKLGIINSACAVFE-----GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           V  +A  G    A  + E     G    +VI+WN L++G  ++G A +A+     M    
Sbjct: 92  VAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEG 151

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + P+       L A   VG +  G ++H   +K     D  V T L+DMYGKCG+  + 
Sbjct: 152 LLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEV 211

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
           + +F +         NA+I+    + Q  +AL  F++ +D GV  + +++ S++  C  +
Sbjct: 212 VRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQN 271

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
           G   E   +F  MQ + G +P+     C++  F     L
Sbjct: 272 GKDLEAVEFFREMQAQ-GTEPNSVTIPCVLPAFANVAAL 309


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/694 (35%), Positives = 379/694 (54%), Gaps = 9/694 (1%)

Query: 47  EIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E     + ++CT+   V   +++H + V       V+  T L+N YA LG +  +   F 
Sbjct: 120 EFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFH 179

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---V 160
            +  R   TWN++I+ Y + G    A++ F +  +  G+RPD +     + AC  L    
Sbjct: 180 ALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGI-EGVRPDRFVLASAVSACSALGFLE 238

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G++IH    +   E D  V   L+ +YC+    + ARKLFD M  R+  SW  MISGY 
Sbjct: 239 GGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYM 298

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           Q+    EA+ +   M   G   D     SIL  C     I  G  IH +++K  LE + +
Sbjct: 299 QNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEY 358

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V N LI+MYAK   +  A  VFD + E D +S+N++I  Y ++ D   A   F  M+   
Sbjct: 359 VKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFS 418

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           ++P LLT VSL  + +       S+ +HG I++ G  + D+   +A++D+Y+K  ++N A
Sbjct: 419 LRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSL-DLYAASALIDVYSKCSLVNDA 477

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF  L  KD++ WN++I G+AQN    EAI++F  +   + + PN+ T+V+++   S 
Sbjct: 478 KTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLL-LSGMAPNEFTFVALVTVAST 536

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
           + ++  G + HA +IK  +  D  V+  L+DMY KCG I +   LF        + WN++
Sbjct: 537 LASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSM 596

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           I+ +  HG  ++AL  FR M +  V P+++TFV +L+AC+H+G V EG  +F+ M+  + 
Sbjct: 597 ITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYD 656

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
           I+P ++HY  +V+LFGR+G L  A  FI+ MP++P A++W +LL AC + GN E+G  A+
Sbjct: 657 IEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAA 716

Query: 641 DRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIF 700
           +     D  + G YVL+SNIYA+ G W  V  +R      G  K  G S IEV  +V  F
Sbjct: 717 EMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTF 776

Query: 701 YTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
               R HP+ E IY  L  LT+ +K+LGYVPD S
Sbjct: 777 IVRGREHPEAELIYSVLDELTSLIKNLGYVPDTS 810



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/574 (31%), Positives = 307/574 (53%), Gaps = 11/574 (1%)

Query: 66  LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
           +HA   V+G++  +F +  L+  Y+NLG L  +RH FD + +RN+ +W S+IS+Y + GR
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 126 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAA 182
              A+  F  F   S   P+ +    VL+AC   + +  G+++H   +KL  + +V+V  
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
           +L+++Y + G  + A  +F  +PVR   +WN +I+GY Q G    AL++ D M +EGV  
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           D   +AS +  C+    +  G  IH Y  +   E +  V N LI++Y K   +  A ++F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D M  R++VSW ++I+ Y Q++    A   F  M QAG QPD     S+ +    L    
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
             R +H  +++      D  + NA++DMYAK   +  A AVF+ L   D IS+N +I GY
Sbjct: 340 QGRQIHAHVIKAD-LEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGY 398

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
           ++N   +EA+ +FQ M   + + P+  T+VS+L   S   A+    +IH  +IK+    D
Sbjct: 399 SKNRDLAEAVNIFQRMRFFS-LRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLD 457

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           ++ A+ L+D+Y KC  ++DA ++F  +     V WN++I  H  + QG++A+  F Q+L 
Sbjct: 458 LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI--KPHLKHYGCMVDLFGRAGH 600
            G+ P+  TFV+L+T  S    +  GQ+ FH    + G+   PH+ +   ++D++ + G 
Sbjct: 518 SGMAPNEFTFVALVTVASTLASMFHGQQ-FHAWIIKAGVDNDPHVSN--ALIDMYAKCGF 574

Query: 601 LGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           +       ++     D   W +++     HG+ E
Sbjct: 575 IKEGRMLFES-TCGEDVICWNSMITTYAQHGHAE 607



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 91/188 (48%), Gaps = 6/188 (3%)

Query: 43  NESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF 102
           NE   +    +  +   + H ++ HA ++ +G       S  L++ YA  G +   R  F
Sbjct: 523 NEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLF 582

Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LV 160
           +     +V  WNSMI+ Y + G   EA+  F +    + + P++ TF  VL AC +   V
Sbjct: 583 ESTCGEDVICWNSMITTYAQHGHAEEALQVF-RLMGEAEVEPNYVTFVGVLSACAHAGFV 641

Query: 161 DGKKIHCSVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
                H + +K  ++ +  +   AS+++++ R G  + A++  + MP++ + + W +++S
Sbjct: 642 GEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLS 701

Query: 218 GYCQSGNA 225
                GNA
Sbjct: 702 ACHLFGNA 709


>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/507 (42%), Positives = 311/507 (61%), Gaps = 2/507 (0%)

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           NS+I  Y   N  + +   F  M +  I PD  T  ++    AQL D    + +HG +++
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G F+ DV    A+V +Y     I+ A  +F+ +P ++ ++WN LITGY  N    +AI+
Sbjct: 118 MG-FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
            F+ M   +   P++ T V +L A SH+GA  QG  IH  +  N L  +VFV T L+DMY
Sbjct: 177 AFRGML-ADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMY 235

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG + +   +F ++   +   WN +IS + ++GQGD AL  F +ML E  +PD +TF+
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L AC H GLV+EG+  F  M+++FG++P ++HYGCMVDL GRAG L  A   IQ+M +
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            PD  IW ALL ACR+HGN +LG     RL E++  N   YVL+SNIY+   +W  V ++
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R +   RG++K PG SSIE+NN V  F   N   P++E IY +L NL  K+K  GYV   
Sbjct: 416 RGMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGT 475

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
              L D+E++EKEH +  HSE+LA+AFG+++SP    ++I KNLR+C DCH + K +S +
Sbjct: 476 DMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLV 535

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            +R I+VRD NRFHHF +G CSC DYW
Sbjct: 536 YKRYIVVRDRNRFHHFYEGFCSCRDYW 562



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 200/426 (46%), Gaps = 28/426 (6%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHIS-----YR---NVYTWNSMISVYVRCGRLSEAVD 131
           ++  +  +F   L D S SR+ F+ I+     YR   N    NSMI  Y+    L++ ++
Sbjct: 16  YNDVRRGHFLMKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLD---LNKHLN 72

Query: 132 CFYQFTLTS--GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLH 186
             Y F L     + PD  TFP VLKA   L D   GK IH  V+++GF  DV+ + +L+H
Sbjct: 73  SLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVH 132

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           +YC     + A +LFD+MP R++ +WNA+I+GY  +   V+A+D    M  +G      T
Sbjct: 133 LYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERT 192

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V  +L  C+       G  IH +I  + L  N+FV   LI+MYAK G +    +VF+++ 
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIR 252

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           E++V +WN +I+ Y  +     A   F+ M     +PD +T + +             R 
Sbjct: 253 EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQN 425
               + ++      +     +VD+  + G++  A  + + + ++ D I W  L+     +
Sbjct: 313 QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVH 372

Query: 426 GLASEAIEVFQMMEECNEINPNQG-TYVSILPAYS------HVGALRQGIKIHA-RVIKN 477
           G       + + +    E+ PN G  YV +   YS       VG LR  + +   R +  
Sbjct: 373 GNTKLGEYIIKRL---IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPG 429

Query: 478 CLCFDV 483
           C   ++
Sbjct: 430 CSSIEI 435



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H +++  G I  V++ST LV+ Y     +S +   FD +  RN  TWN++I+ Y   
Sbjct: 109 KMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHN 168

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
            +  +A+D F +  L  G +P   T   VL AC +L     GK IH  +       +VFV
Sbjct: 169 RKFVKAIDAF-RGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFV 227

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY + G      K+F+++  ++  +WN +ISGY  +G    AL     M +E  
Sbjct: 228 GTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENF 287

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHAL 299
             D +T   +L  C     +  G    + + +  GL+  +     ++++  + G++  AL
Sbjct: 288 KPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEAL 347

Query: 300 RVFDQM-MERDVVSWNSIIAA 319
            +   M +E D + W +++ A
Sbjct: 348 ELIQSMSIEPDPIIWRALLCA 368


>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 562

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/507 (42%), Positives = 311/507 (61%), Gaps = 2/507 (0%)

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
           NS+I  Y   N  + +   F  M +  I PD  T  ++    AQL D    + +HG +++
Sbjct: 58  NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE 433
            G F+ DV    A+V +Y     I+ A  +F+ +P ++ ++WN LITGY  N    +AI+
Sbjct: 118 MG-FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAID 176

Query: 434 VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
            F+ M   +   P++ T V +L A SH+GA  QG  IH  +  N L  +VFV T L+DMY
Sbjct: 177 AFRGML-ADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMY 235

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG + +   +F ++   +   WN +IS + ++GQGD AL  F +ML E  +PD +TF+
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
            +L AC H GLV+EG+  F  M+++FG++P ++HYGCMVDL GRAG L  A   IQ+M +
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
            PD  IW ALL ACR+HGN +LG     RL E++  N   YVL+SNIY+   +W  V ++
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R +   RG++K PG SSIE+NN V  F   N   P++E IY +L NL  K+K  GYV   
Sbjct: 416 RGMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGT 475

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
              L D+E++EKEH +  HSE+LA+AFG+++SP    ++I KNLR+C DCH + K +S +
Sbjct: 476 DMALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLV 535

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            +R I+VRD NRFHHF +G CSC DYW
Sbjct: 536 YKRYIVVRDRNRFHHFYEGFCSCRDYW 562



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 200/426 (46%), Gaps = 28/426 (6%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHIS-----YR---NVYTWNSMISVYVRCGRLSEAVD 131
           ++  +  +F   L D S SR+ F+ I+     YR   N    NSMI  Y+    L++ ++
Sbjct: 16  YNDVRRGHFLMKLIDDSVSRNGFESIARIFSKYRGSINSQQCNSMIRTYLD---LNKHLN 72

Query: 132 CFYQFTLTS--GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLH 186
             Y F L     + PD  TFP VLKA   L D   GK IH  V+++GF  DV+ + +L+H
Sbjct: 73  SLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVH 132

Query: 187 MYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPIT 246
           +YC     + A +LFD+MP R++ +WNA+I+GY  +   V+A+D    M  +G      T
Sbjct: 133 LYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERT 192

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           V  +L  C+       G  IH +I  + L  N+FV   LI+MYAK G +    +VF+++ 
Sbjct: 193 VVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIR 252

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           E++V +WN +I+ Y  +     A   F+ M     +PD +T + +             R 
Sbjct: 253 EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRW 312

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQN 425
               + ++      +     +VD+  + G++  A  + + + ++ D I W  L+     +
Sbjct: 313 QFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVH 372

Query: 426 GLASEAIEVFQMMEECNEINPNQG-TYVSILPAYS------HVGALRQGIKIHA-RVIKN 477
           G       + + +    E+ PN G  YV +   YS       VG LR  + +   R +  
Sbjct: 373 GNTKLGEYIIKRL---IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPG 429

Query: 478 CLCFDV 483
           C   ++
Sbjct: 430 CSSIEI 435



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H +++  G I  V++ST LV+ Y     +S +   FD +  RN  TWN++I+ Y   
Sbjct: 109 KMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHN 168

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFV 180
            +  +A+D F +  L  G +P   T   VL AC +L     GK IH  +       +VFV
Sbjct: 169 RKFVKAIDAF-RGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFV 227

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             +L+ MY + G      K+F+++  ++  +WN +ISGY  +G    AL     M +E  
Sbjct: 228 GTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENF 287

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKH-GLEFNLFVSNNLINMYAKFGMMRHAL 299
             D +T   +L  C     +  G    + + +  GL+  +     ++++  + G++  AL
Sbjct: 288 KPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEAL 347

Query: 300 RVFDQM-MERDVVSWNSIIAA 319
            +   M +E D + W +++ A
Sbjct: 348 ELIQSMSIEPDPIIWRALLCA 368


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/711 (35%), Positives = 389/711 (54%), Gaps = 35/711 (4%)

Query: 50  FDDLFQSCTKLHHVK-----RLHALLVVSGKIKTVFSSTKLVNFYA-------------N 91
           F    ++C +   +K       H L    G  + V++S  L+N Y+             +
Sbjct: 107 FSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNS--LLNMYSTCLTEVPYLGTAYD 164

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
             +    R  FD +  RNV  WN+MIS YV+  RL EA   F +  +  G+RP   +F  
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMF-RTMMRMGIRPTPVSFVN 223

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPV 206
           V  A   + D      ++  V+KLG ++  D FV +S + MY   G  + AR++FD    
Sbjct: 224 VFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE 283

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDE-MRLEGVSMDPITVASILPVCARSDNILSGLL 265
           R++  WN MI GY Q+   +EA+D+  + M  E   +D +T  S L   ++   +  G  
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQ 343

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H YI+K      + + N +I MY++ G +  + +VF  M+ERDVV+WN++++A+ Q+  
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
                     MQ+ G   D +TL +L S+ + L      +  H +++R G   E   + +
Sbjct: 404 DDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG--MDS 461

Query: 386 AVVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            ++DMYAK G+I +A  +FE      +D  +WN +I GY QNGL+ E   VF+ M E N 
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN- 520

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN  T  SILPA + +G +  G +IH   I+  L  +VFV T L+DMY K G I  A 
Sbjct: 521 VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAE 580

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           ++F +    +SV +  +IS +G HG G++AL+ F  ML  G++PD +TFV++L+ACS++G
Sbjct: 581 NVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA-SIWGA 622
           LV EG R F  M+ E+ I+P  +HY C+ D+ GR G +  A+ F++ +    +   IWG+
Sbjct: 641 LVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGS 700

Query: 623 LLGACRIHGNMELGAVASDRLFEVD--SENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           LLGACRIHG  ELG V +++L E++  S   GY+VL+SNIYA  G W+ VD VR   R +
Sbjct: 701 LLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQK 760

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           GL K  G S +EV   V+ F + +  HP+  +IY  L  L  +MK  GY P
Sbjct: 761 GLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 270/534 (50%), Gaps = 37/534 (6%)

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY-QFTLTSGLRPDFYTFPPVLKAC-- 156
           H FD I       WN++I  ++ C  +      FY +   +   + D YTF   LKAC  
Sbjct: 58  HLFDSIPRPTTVLWNTIIIGFI-CNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQ 116

Query: 157 -RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-------------FGLANVARKLFD 202
            R+L  GK +HC VL+  F     V  SLL+MY               F   ++ R++FD
Sbjct: 117 ARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFD 176

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            M  R+  +WN MIS Y ++   +EA  +   M   G+   P++  ++ P   R  +  +
Sbjct: 177 TMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDN 236

Query: 263 GLLIHLYIVKHGLEF--NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             +++  +VK G +F  + FV ++ I MYA+ G +  A  +FD  +ER+   WN++I  Y
Sbjct: 237 ANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGY 296

Query: 321 EQSNDPITAHGFFT-TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
            Q+N PI A   F   M+      D +T +S  + ++QL      R +H +I++    ++
Sbjct: 297 VQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQ 356

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE-VFQMM 438
            V+I NA++ MY++ G I ++  VF  +  +DV++WNT+++ + QNGL  E +  VF M 
Sbjct: 357 -VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQ 415

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           ++   ++    T  ++L   S++ +   G + HA +I++ + F+  + + L+DMY K G 
Sbjct: 416 KQGFMVDSV--TLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGL 472

Query: 499 IDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           I  A  LF +          WNA+I+ +  +G  ++    FR+M+++ VRP+ +T  S+L
Sbjct: 473 ITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASIL 532

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHN 606
            AC+  G +  G++        F I+  L         ++D++ ++G +  A N
Sbjct: 533 PACNPMGTIGLGKQI-----HGFAIRCFLNRNVFVGTALLDMYSKSGAITYAEN 581



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 235/489 (48%), Gaps = 38/489 (7%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVS 241
           S L   CR G  + A  LFD +P   +  WN +I G+  +   ++AL     MR      
Sbjct: 42  SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK---------- 291
            D  T +S L  CA++ ++  G  +H ++++     +  V N+L+NMY+           
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161

Query: 292 ---FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
              F       RVFD M +R+VV+WN++I+ Y ++   I A   F TM + GI+P  ++ 
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           V++   V +++D  N+  ++G +++ G  F++D  + ++ + MYA+LG ++ A  +F+  
Sbjct: 222 VNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCC 281

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             ++   WNT+I GY QN    EAI++F  + E  +   +  T++S L A S +  L  G
Sbjct: 282 LERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELG 341

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++HA ++K+     V +   ++ MY +CG I  +  +F  +     V WN ++S    +
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH--L 585
           G  D+ L     M  +G   D +T  +LL+  S            ++  +E G + H  L
Sbjct: 402 GLDDEGLMLVFAMQKQGFMVDSVTLTALLSLAS------------NLRSQEIGKQAHAYL 449

Query: 586 KHYGC--------MVDLFGRAGHLGMAHN-FIQNMPVRPDASIWGALLGACRIHGNMELG 636
             +G         ++D++ ++G +  A   F +N     D + W A++     +G  E G
Sbjct: 450 IRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEG 509

Query: 637 AVASDRLFE 645
                ++ E
Sbjct: 510 FAVFRKMIE 518


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/654 (36%), Positives = 373/654 (57%), Gaps = 9/654 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
            +  C  ++ +  +HA LVV G  + +  STKLV+ Y + G L  +R  FD I + +  +
Sbjct: 11  FYSLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLS 70

Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSV 169
           W  +I  Y       + V  FY          D   F  VLKAC   RN  +G+K+HC +
Sbjct: 71  WKVIIRWYFLNSEFRDIVG-FYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQI 129

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +K G   D FV   L+ MY + G    +R +FD+   R+  SW++MI+GY Q+  A + L
Sbjct: 130 VKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGL 188

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            + + MR E +  + IT+  ++  C +   +  G  +H Y++K G+E   ++   L+++Y
Sbjct: 189 VLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLY 248

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G++R A  VFD++   D+VSW ++I  Y Q+  P  A   F   +Q  + P+ +T+ 
Sbjct: 249 AKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIA 308

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S+ S  +QL +    RS+HG  ++ G    D I+ N++VD YAK  +   A  VFE +  
Sbjct: 309 SVFSSCSQLLNLNLGRSIHGLSIKLG--SRDPIVTNSLVDFYAKCQMNRDARYVFETISD 366

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
           +DV++WN++I+ ++QNG A EA+E+F  M     + P+  T VS+L A + + AL+ G  
Sbjct: 367 RDVVAWNSIISAFSQNGSAYEALELFHQMR-MGSVLPDAVTLVSVLSACASLNALQVGSS 425

Query: 470 IHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
            HA  +K   L  +V+V T L+  Y KCG  + A  +F  + + S+V W+A+IS +GI G
Sbjct: 426 FHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQG 485

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
            G  +L+ F  ML   ++P+   F S+L+ACSH+G++ EG R F M+ +++ + P  KHY
Sbjct: 486 NGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHY 545

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS 648
            CMVDL  RAG L  A +FIQ MPV+PD S++GA L  C +H   +LG +A  R+ E+  
Sbjct: 546 TCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHP 605

Query: 649 ENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
            +  YYVLM N+YA+  +W  V +VR L + RGL KTPG S +E++   D  ++
Sbjct: 606 GDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMDVDHDFSFS 659


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/607 (38%), Positives = 351/607 (57%), Gaps = 41/607 (6%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L +CAR+  + +   +H +IVK G+     ++N L+N+Y K G   HAL+VFD+M  RD 
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 311 VSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH- 368
           ++W S++ A  Q+N    T   F +    +G++PD     +L    A L    + R VH 
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129

Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
            FI+    +  D ++ +++VDMYAK G++NSA AVF+ + VK+ ISW  +++GYA++G  
Sbjct: 130 HFIVSE--YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187

Query: 429 SEAIEVFQMMEECNE----------INPNQG---------------------TYVSILPA 457
            EA+E+F+++   N           +   +G                        SI+ A
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGA 247

Query: 458 YSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
            +++ A   G ++H  VI   L FD  VF++  L+DMY KC  +  A  +F ++     V
Sbjct: 248 CANLAASIAGRQVHGLVI--ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W ++I     HGQ +KAL  +  M+  GV+P+ +TFV L+ ACSH G V +G+  F  M
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
            +++GI+P L+HY C++DL GR+G L  A N I  MP  PD   W ALL AC+  G  ++
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425

Query: 636 GAVASDRLF-EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           G   +D L      ++   Y+L+SNIYA+   W  V E R    +  ++K PG SS+EV 
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHS 753
            + ++FY G  +HP  E I+  L+ L  +M+   GYVPD S++L D++E EKE +L  HS
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHS 545

Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
           ER A+A+G++ + P +PI+I KNLRVCGDCH   K IS+ITEREIIVRD+ R+HHFK G 
Sbjct: 546 ERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGK 605

Query: 814 CSCGDYW 820
           CSC D+W
Sbjct: 606 CSCNDFW 612



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 222/458 (48%), Gaps = 40/458 (8%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R L   K +H  ++KLG      +A +L+++Y + G A+ A ++FD+MP RD  +W +++
Sbjct: 17  RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 76

Query: 217 SGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
           +   Q+  + + L          G+  D    ++++  CA   +I  G  +H + +    
Sbjct: 77  TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE-------------- 321
             +  V ++L++MYAK G++  A  VFD +  ++ +SW ++++ Y               
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196

Query: 322 -----------------QSNDPITAHGFFTTMQQAGIQP-DLLTLVSLTSIVAQLNDCRN 363
                            QS   + A   FT M++  +   D L L S+    A L     
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256

Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
            R VHG ++  G F   V I NA++DMYAK   + +A  +F  +  +DV+SW +LI G A
Sbjct: 257 GRQVHGLVIALG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315

Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFD 482
           Q+G A +A+ ++  M   + + PN+ T+V ++ A SHVG + +G ++   + K+  +   
Sbjct: 316 QHGQAEKALALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQML 541
           +   TCL+D+ G+ G +D+A +L + +P     P W A++S     G+G   +     ++
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434

Query: 542 DEGVRPDHITFV---SLLTACSHSGLVSEGQRYFHMMQ 576
                 D  T++   ++  + S  G VSE +R    M+
Sbjct: 435 SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 194/420 (46%), Gaps = 39/420 (9%)

Query: 54  FQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
            Q C +   L   K LHA +V  G ++    +  LVN Y   G  S +   FD + +R+ 
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VD-GKKIHC 167
             W S+++   +     + +  F     +SGLRPD + F  ++KAC NL  +D G+++HC
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC------- 220
             +   +  D  V +SL+ MY + GL N A+ +FD + V+++ SW AM+SGY        
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189

Query: 221 ------------------------QSGNAVEALDILDEMRLEGVS-MDPITVASILPVCA 255
                                   QSG  +EA  +  EMR E V  +DP+ ++SI+  CA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
                ++G  +H  ++  G +  +F+SN LI+MYAK   +  A  +F +M  RDVVSW S
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I    Q      A   +  M   G++P+ +T V L    + +      R +   + +  
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEV 434
                +     ++D+  + G+++ A  +   +P   D  +W  L++   + G     I +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 39/309 (12%)

Query: 50  FDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C  L    H +++H   +VS         + LV+ YA  G L+ ++  FD I 
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCF--------YQFT-LTSGLRP------------- 144
            +N  +W +M+S Y + GR  EA++ F        Y +T L SG                
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227

Query: 145 ---------DFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                    D      ++ AC NL   + G+++H  V+ LGF+  VF++ +L+ MY +  
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
               A+ +F  M  RD  SW ++I G  Q G A +AL + D+M   GV  + +T   ++ 
Sbjct: 288 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347

Query: 253 VCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
            C+    +  G  +   + K +G+  +L     L+++  + G++  A  +   M    D 
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 407

Query: 311 VSWNSIIAA 319
            +W ++++A
Sbjct: 408 PTWAALLSA 416


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/624 (38%), Positives = 349/624 (55%), Gaps = 10/624 (1%)

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A KLFD M VRD  SWN+MI G    GN   A  + DEM  + V      V   L    R
Sbjct: 62  ALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKF-GR 120

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
            +     L   L++  H  +   +  N +++ Y + G +   +R+F++M  RDV+SW S+
Sbjct: 121 VE-----LAQRLFLDMHVKDVAAW--NAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSM 173

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I   + +     A   F  M ++G++P   T   + S  A   +      VHG +++ G 
Sbjct: 174 IGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGC 233

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
           F  +  I  +++  YA    I  A  +F     K+V+ W  L+T Y  N    +A+ VF 
Sbjct: 234 FFHE-FISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFG 292

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M +   + PNQ T+   L A   + AL +G +IH   IK  L  DVFV   LV MY +C
Sbjct: 293 DMTKMGAL-PNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTEC 351

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G ++ A+++F  +     V WN+II     HG G  AL FF QM+  GV P+ ITF  LL
Sbjct: 352 GNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLL 411

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
           +ACS SG++ +G+ +F  +          +HY CMVD+ GR G L  A   ++ MPV+ +
Sbjct: 412 SACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKAN 471

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
           + IW ALL ACR+H N+E+   A+  + +++      YVL+SNIYA+ G+W  V  +R  
Sbjct: 472 SMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVK 531

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
            +  GL K PG S + +  K   F + +R+HP  E+IY++L  L  K+K  GYVPD+ F 
Sbjct: 532 MKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFA 591

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L DVE+++KE +L+ HSERLAIAFG++S+   S I + KNLRVCGDCH+  K +S+I  R
Sbjct: 592 LHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGR 651

Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
           +I+VRDS RFHHFK+GICSC DYW
Sbjct: 652 KIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 243/507 (47%), Gaps = 60/507 (11%)

Query: 78  TVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT 137
           T+  +T L N   N   L  +R  FD I   N++ +  MI+ Y R  RL +A+  F + +
Sbjct: 12  TLSYTTSLANHLKN-QRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMS 70

Query: 138 LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGF-------EWDVFVAASLLHMYCR 190
           +      D  ++  ++K C        + C  L +         E +V    ++++ Y +
Sbjct: 71  VR-----DVVSWNSMIKGC--------LDCGNLGMATRLFDEMPEKNVISWTTMVNGYLK 117

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV---------- 240
           FG   +A++LF DM V+D  +WNAM+ GY ++G   E + + +EM +  V          
Sbjct: 118 FGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGL 177

Query: 241 -------------------SMDPI--TVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
                               ++P   T A +L  CA +     G+ +H ++VK G  F+ 
Sbjct: 178 DLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHE 237

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
           F+S +LI  YA    + HA ++F++ + ++VV W +++ AY  +N    A   F  M + 
Sbjct: 238 FISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKM 297

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G  P+  T          L      + +H   ++ G    DV +GN++V MY + G +NS
Sbjct: 298 GALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLG-LETDVFVGNSLVVMYTECGNVNS 356

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A AVF  +  KD++SWN++I G AQ+G    A+  F  M     ++PN+ T+  +L A S
Sbjct: 357 AVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIR-RGVDPNEITFTGLLSACS 415

Query: 460 HVGALRQG---IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
             G L +G    +  +R   N L    +   C+VD+ G+CG++D+A  L   +P +++S+
Sbjct: 416 RSGMLLKGRCFFEYISRYKSNVLRPQHY--ACMVDILGRCGKLDEAEELVRYMPVKANSM 473

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLD 542
            W A++S   +H   + A    + +LD
Sbjct: 474 IWLALLSACRVHSNLEVAERAAKHILD 500



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 174/382 (45%), Gaps = 40/382 (10%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF--- 133
           K V S T +VN Y   G +  ++  F  +  ++V  WN+M+  Y   GR+ E V  F   
Sbjct: 103 KNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEM 162

Query: 134 ---------------------------YQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
                                      ++  L SG+ P + TF  VL AC N V+   G 
Sbjct: 163 PVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGV 222

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
           ++H  V+KLG  +  F++ SL+  Y        A K+F++   ++   W A+++ Y  + 
Sbjct: 223 QVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNN 282

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
              +AL +  +M   G   +  T +  L  C   + +  G  IH   +K GLE ++FV N
Sbjct: 283 KHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGN 342

Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
           +L+ MY + G +  A+ VF  + E+D+VSWNSII    Q    + A  FF  M + G+ P
Sbjct: 343 SLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDP 402

Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN---AVVDMYAKLGIINSA 400
           + +T   L S  ++       R    +I R   +  +V+       +VD+  + G ++ A
Sbjct: 403 NEITFTGLLSACSRSGMLLKGRCFFEYISR---YKSNVLRPQHYACMVDILGRCGKLDEA 459

Query: 401 CAVFEGLPVK-DVISWNTLITG 421
             +   +PVK + + W  L++ 
Sbjct: 460 EELVRYMPVKANSMIWLALLSA 481



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 14/355 (3%)

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           NL +   +I  Y +   +  AL++FD+M  RDVVSWNS+I       +   A   F  M 
Sbjct: 42  NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101

Query: 338 QAGIQPDLLTLVSLTSIV-AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
           +  +       +S T++V   L   R   +   F+      ++DV   NA+V  Y + G 
Sbjct: 102 EKNV-------ISWTTMVNGYLKFGRVELAQRLFL---DMHVKDVAAWNAMVHGYFENGR 151

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +     +FE +PV+DVISW ++I G   NG + EA+ VF+ M     + P   T+  +L 
Sbjct: 152 VEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSG-VEPTWSTFACVLS 210

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A ++      G+++H  V+K    F  F++  L+  Y  C +I+ A  +F +    + V 
Sbjct: 211 ACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVK 270

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W A+++ +  + +   AL  F  M   G  P+  TF   L AC     + +G+   H M 
Sbjct: 271 WTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKE-IHTMA 329

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
            + G++  +     +V ++   G++  A    +N+    D   W +++     HG
Sbjct: 330 IKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EKDIVSWNSIIVGSAQHG 383



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 4/212 (1%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  +V  G     F S  L+ FYAN   +  +   F+    +NV  W ++++ YV   
Sbjct: 223 QVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNN 282

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
           +  +A+  F   T    L P+  TF   LKAC     L  GK+IH   +KLG E DVFV 
Sbjct: 283 KHQDALRVFGDMTKMGAL-PNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVG 341

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
            SL+ MY   G  N A  +F ++  +D  SWN++I G  Q G  + AL   ++M   GV 
Sbjct: 342 NSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVD 401

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKH 273
            + IT   +L  C+RS  +L G     YI ++
Sbjct: 402 PNEITFTGLLSACSRSGMLLKGRCFFEYISRY 433



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/288 (20%), Positives = 127/288 (44%), Gaps = 45/288 (15%)

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME---------------EC 441
           ++ A  +F+ +P  ++  +  +I GY +N    +A+++F  M                +C
Sbjct: 28  LDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDC 87

Query: 442 NEI-----------NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
             +             N  ++ +++  Y   G     +++  R+  +    DV     +V
Sbjct: 88  GNLGMATRLFDEMPEKNVISWTTMVNGYLKFGR----VELAQRLFLDMHVKDVAAWNAMV 143

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
             Y + GR+++ + LF ++P    + W ++I    ++G+ ++AL  F++ML  GV P   
Sbjct: 144 HGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWS 203

Query: 551 TFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQ 609
           TF  +L+AC+++   + G Q + H+++   G   H      ++  +     +  AH  I 
Sbjct: 204 TFACVLSACANAVEFNLGVQVHGHVVK--LGCFFHEFISVSLITFYANCMKIEHAHK-IF 260

Query: 610 NMPVRPDASIWGALL----------GACRIHGNM-ELGAVASDRLFEV 646
           N  +  +   W ALL           A R+ G+M ++GA+ +   F +
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 25/185 (13%)

Query: 50  FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F    ++C  L  +   K +H + +  G    VF    LV  Y   G+++ +   F +I+
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN 365

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGK 163
            +++ +WNS+I    + G    A+  F Q  +  G+ P+  TF  +L AC     L+ G+
Sbjct: 366 EKDIVSWNSIIVGSAQHGFGLWALIFFNQM-IRRGVDPNEITFTGLLSACSRSGMLLKGR 424

Query: 164 KIHCSVLKLGFEWDVFVAASLL---HMYC------RFGLANVARKLFDDMPVR-DSGSWN 213
                     FE+     +++L   H  C      R G  + A +L   MPV+ +S  W 
Sbjct: 425 CF--------FEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWL 476

Query: 214 AMISG 218
           A++S 
Sbjct: 477 ALLSA 481


>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
 gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g52630
 gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
          Length = 588

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/574 (41%), Positives = 347/574 (60%), Gaps = 3/574 (0%)

Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
           +  +L   AR+ + + GL +H Y+VK GL     V+NNLIN Y+K  +   + R F+   
Sbjct: 18  ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           ++   +W+SII+ + Q+  P  +  F   M    ++PD   L S T   A L+ C   RS
Sbjct: 78  QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH   M+ G +  DV +G+++VDMYAK G I  A  +F+ +P ++V++W+ ++ GYAQ G
Sbjct: 138 VHCLSMKTG-YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
              EA+ +F+     N +  N  ++ S++   ++   L  G +IH   IK+      FV 
Sbjct: 197 ENEEALWLFKEALFEN-LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           + LV +Y KCG  + A  +F +VP  +   WNA++  +  H    K +  F++M   G++
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           P+ ITF+++L ACSH+GLV EG+ YF  M+E   I+P  KHY  +VD+ GRAG L  A  
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALE 374

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I NMP+ P  S+WGALL +C +H N EL A A+D++FE+   + G ++ +SN YA  G+
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           +E   + R L RDRG KK  G S +E  NKV  F  G R H K ++IY++L  L  +M+ 
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 494

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GY+ D S+VL++V+ DEK   +  HSERLAIAFG+I+ P   PI++ KNLRVCGDCHN 
Sbjct: 495 AGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNA 554

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            KF+S  T R IIVRD+NRFH F+DG CSC DYW
Sbjct: 555 IKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 211/425 (49%), Gaps = 40/425 (9%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF-SRHTFDHISYRNVYTWNSMISVYVRC 123
           +LH  +V SG       +  L+NFY+    L F SR  F+    ++  TW+S+IS + + 
Sbjct: 36  QLHGYVVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ- 93

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
             L      F +  +   LRPD +  P   K+C  L     G+ +HC  +K G++ DVFV
Sbjct: 94  NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SL+ MY + G    ARK+FD+MP R+  +W+ M+ GY Q G   EAL +  E   E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           +++  + +S++ VCA S  +  G  IH   +K   + + FV ++L+++Y+K G+   A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           VF+++  +++  WN+++ AY Q +        F  M+ +G++P+ +T +++      LN 
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV------LNA 327

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGN----------AVVDMYAKLGIINSACAVFEGLPVK 410
           C      H  ++  G +  D +  +          ++VDM  + G +  A  V   +P+ 
Sbjct: 328 CS-----HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382

Query: 411 DVIS-WNTLITG---YAQNGLAS-EAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGAL 464
              S W  L+T    +    LA+  A +VF       E+ P + G ++S+  AY+  G  
Sbjct: 383 PTESVWGALLTSCTVHKNTELAAFAADKVF-------ELGPVSSGMHISLSNAYAADGRF 435

Query: 465 RQGIK 469
               K
Sbjct: 436 EDAAK 440



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 199/382 (52%), Gaps = 11/382 (2%)

Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
           R+ + G ++H  V+K G      VA +L++ Y +  L   +R+ F+D P + S +W+++I
Sbjct: 29  RSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSII 88

Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS----GLLIHLYIVK 272
           S + Q+     +L+ L +M    +  D      +LP   +S  ILS    G  +H   +K
Sbjct: 89  SCFAQNELPWMSLEFLKKMMAGNLRPDD----HVLPSATKSCAILSRCDIGRSVHCLSMK 144

Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
            G + ++FV ++L++MYAK G + +A ++FD+M +R+VV+W+ ++  Y Q  +   A   
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWL 204

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
           F       +  +  +  S+ S+ A        R +HG +  +  F     +G+++V +Y+
Sbjct: 205 FKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYS 263

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G+   A  VF  +PVK++  WN ++  YAQ+    + IE+F+ M + + + PN  T++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFL 322

Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-R 511
           ++L A SH G + +G     ++ ++ +         LVDM G+ GR+ +A+ +   +P  
Sbjct: 323 NVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382

Query: 512 SSSVPWNAIISCHGIHGQGDKA 533
            +   W A+++   +H   + A
Sbjct: 383 PTESVWGALLTSCTVHKNTELA 404



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 128/245 (52%), Gaps = 4/245 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + +H L + +G    VF  + LV+ YA  G++ ++R  FD +  RNV TW+ M+  Y + 
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 195

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G   EA+  F +  L   L  + Y+F  V+  C N   L  G++IH   +K  F+   FV
Sbjct: 196 GENEEALWLFKE-ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            +SL+ +Y + G+   A ++F+++PV++ G WNAM+  Y Q  +  + +++   M+L G+
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             + IT  ++L  C+ +  +  G      + +  +E       +L++M  + G ++ AL 
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374

Query: 301 VFDQM 305
           V   M
Sbjct: 375 VITNM 379


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/685 (34%), Positives = 373/685 (54%), Gaps = 65/685 (9%)

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD- 258
           LFD MP        A+ + +  S      L +   MR  GV  D  T   +   CAR   
Sbjct: 59  LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118

Query: 259 NILSGLLIHLYIVKHGLEFNL-FVSNNLINMYAKFGMMRHALRVFDQMM----------- 306
           ++L   ++H    +  L   +  VSN +I+MY + G+   A R FD +            
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVI 178

Query: 307 --------------------ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
                                R+V+SW  +I+ Y ++     A   F +M   GI+PD +
Sbjct: 179 SGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEV 238

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII----------------------- 383
           T++ L S  AQL D    RS+H  +  +G  M   ++                       
Sbjct: 239 TVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDAL 298

Query: 384 --------GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
                    NA++D Y KLG ++ A  +F+ +  +D++++N+LITGY   G   EA+ +F
Sbjct: 299 GRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLF 358

Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
             M   +++  +  T VS+L A + +GAL QG  +HA + +  +  D+++ T L+DMY K
Sbjct: 359 MQMRR-HDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLK 417

Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
           CGR+++A  +F  +       W+A+I+    +G G  AL +F  M  +G +P+ +T++++
Sbjct: 418 CGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAI 477

Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
           LTACSHS L+ EG+ YF  M+    I+P ++HYGCM+DL GR+G L  A + ++ MP++P
Sbjct: 478 LTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQP 537

Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
           +A IW ++L ACR+H +  L   A++ L +++ +    YV + NIY +  +WE   ++R 
Sbjct: 538 NAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRR 597

Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
           L  +RG+KK  G+SSI V  +V  F   +RTHP+  +I   +  +T ++KS+GY P  S 
Sbjct: 598 LMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQ 657

Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
           +  DV+E+EKEH L +HSE++AIAFG+IS  P  P+ I KNLRVC DCH+  K IS+I  
Sbjct: 658 ITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWN 717

Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
           REIIVRD +RFHHF+DG CSC D+W
Sbjct: 718 REIIVRDRSRFHHFRDGTCSCNDFW 742



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 163/602 (27%), Positives = 276/602 (45%), Gaps = 87/602 (14%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGD------LSFSRHTFDHISYRNVYTW 113
           +     LHA+LV SG++    S++ L+N   N         L ++   FD +   + + +
Sbjct: 12  VRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPC-STFLF 70

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR----NLVDGKKIHCSV 169
           ++ +    R     E+    Y+    +G+  D +TF  + K C     +++  + +H + 
Sbjct: 71  DTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAAC 130

Query: 170 LKLGFEWDV-FVAASLLHMYCRFGLANVARKLFDDMPVRD--------SG---------- 210
            +      V  V+  ++HMY   GLA  AR+ FDD+PV+D        SG          
Sbjct: 131 FRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDA 190

Query: 211 -------------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
                        SW  +ISGY ++G A EA+D  + M  +G+  D +TV  +L  CA+ 
Sbjct: 191 WCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQL 250

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV---------------- 301
            +++ G  +H  + + G+  +  +   LI+MYAK G +  A  V                
Sbjct: 251 KDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAM 310

Query: 302 ----------------FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
                           FDQM +RD+V++NS+I  Y        A   F  M++  ++ D 
Sbjct: 311 IDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADN 370

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-DVIIGNAVVDMYAKLGIINSACAVF 404
            T+VSL +  A L      R++H  I +R   +E D+ +G A++DMY K G +  A  VF
Sbjct: 371 FTMVSLLTACASLGALPQGRALHACIEQR--LVEVDIYLGTALLDMYLKCGRVEEASLVF 428

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           + + V+DV +W+ +I G A NG+   A+E F  M + +   PN  TY++IL A SH   L
Sbjct: 429 QAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWM-KVDGFQPNSVTYIAILTACSHSCLL 487

Query: 465 RQGIKI--HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 521
            +G       R++ N     +    C++D+ G+ G +D+AM L   +P + ++V W +I+
Sbjct: 488 DEGRLYFEEMRLLHNIRPL-IEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASIL 546

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDH-ITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           S   +H   + A N    +L   + PD    +V L      S    +  +   +M EE G
Sbjct: 547 SACRVHKDANLARNAAEHLLK--LEPDEDAVYVQLYNIYIDSRQWEDASQIRRLM-EERG 603

Query: 581 IK 582
           +K
Sbjct: 604 VK 605



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 187/451 (41%), Gaps = 79/451 (17%)

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG--MMRHALRVFDQMMERDVVSWNSII 317
           + SG L+H     H L       N+L+N +       +R+AL +FD+M     +   ++ 
Sbjct: 23  VASGRLLHPPSASHLL-------NSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFDTALR 75

Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ-LNDCRNSRSVHGFIMRRGW 376
           A +  S+ P +    +  M++ G+  D  T   L    A+        + +H    R   
Sbjct: 76  ACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTML 135

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT------------------- 417
                ++ N ++ MY +LG+   A   F+ +PVKD ++W T                   
Sbjct: 136 PSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLR 195

Query: 418 ------------LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
                       LI+GY++ G A+EA++ F  M   + I P++ T + +L A + +  L 
Sbjct: 196 HSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLS-DGIEPDEVTVIGLLSACAQLKDLV 254

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI-------------------------- 499
            G  +H  V +  +     +   L+DMY KCG I                          
Sbjct: 255 FGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGY 314

Query: 500 ------DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
                 D A  LF Q+     V +N++I+ +   G+  +AL  F QM    +R D+ T V
Sbjct: 315 CKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMV 374

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           SLLTAC+  G + +G R  H   E+  ++  +     ++D++ + G +  A    Q M V
Sbjct: 375 SLLTACASLGALPQG-RALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSV 433

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLF 644
           R D   W A++     +G   +G  A +  F
Sbjct: 434 R-DVHTWSAMIAGLAFNG---MGKAALEYFF 460


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 379/743 (51%), Gaps = 76/743 (10%)

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTS 140
           A  G++  +R  F+ +  R   ++N++++ Y R      A+  F +           L S
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           GL     T P    A             +  + F   V    SLL  Y R GL   A +L
Sbjct: 88  GLSLRRQTLPDAAAA-------------LASIPFPPSVVSFTSLLRGYVRHGLLADAIRL 134

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  MP R+  S+  ++ G   +G   EA  + DEM                         
Sbjct: 135 FQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP------------------------ 170

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                          + ++     +++ Y + G +  A  +FD+M +R+VVSW ++I+ Y
Sbjct: 171 ---------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI--VAQLNDCRNSRSVHGFIMRRGWFM 378
            Q+ +   A   F  M +         LV       V    +  N+   H          
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH---------- 265

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             V   NA++  + + G++++A  VFE +  +D  +W+ +I  Y QN    EA+  F+ M
Sbjct: 266 -PVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREM 324

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                + PN  + +SIL   + +  L  G ++HA +++     DVF  + L+ MY KCG 
Sbjct: 325 L-WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +D A  +F+       V WN++I+ +  HG G++AL  F  M   G+ PD IT++  LTA
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS++G V EG+  F+ M     I+P  +HY CMVDL GR+G +  A + I+NMPV PDA 
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWGAL+GACR+H N E+  VA+ +L E++  N G YVL+S+IY +VG+WE   ++R    
Sbjct: 504 IWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
            R L K+PG S IE + +V +F +G+   HP++  I   L  L   +   GY  D SFVL
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVL 623

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            D++E++K H L  HSER A+A+G++  P   PI++ KNLRVCGDCH+  K I++IT RE
Sbjct: 624 HDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSRE 683

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           I++RD+NRFHHFKDG CSC DYW
Sbjct: 684 IVLRDANRFHHFKDGFCSCRDYW 706



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 179/396 (45%), Gaps = 42/396 (10%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T +++ YA  G+++ +R  F+ +  RN  +W +M+  Y++ G + +A + F   
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
                  P+     PV              C+ + +GF               + G+ + 
Sbjct: 263 -------PEH----PVAA------------CNAMMVGF--------------GQRGMVDA 285

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A+ +F+ M  RD G+W+AMI  Y Q+   +EAL    EM   GV  +  +V SIL VCA 
Sbjct: 286 AKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G  +H  +++   + ++F  + LI MY K G +  A RVF     +D+V WNS+
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y Q      A G F  M+ AG+ PD +T +   +  +     +  R +   +     
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSS 465

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVF 435
                   + +VD+  + G++  A  + + +PV+ D + W  L+ G  +    +E  EV 
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEV- 523

Query: 436 QMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
              ++  E+ P N G YV +   Y+ VG      K+
Sbjct: 524 -AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKM 558



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  E+ +  +     +  HV+    L     +      +  +V F    G +  ++  F+
Sbjct: 233 ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF-GQRGMVDAAKTVFE 291

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +  R+  TW++MI  Y +   L EA+  F +  L  G+RP++ +   +L  C  L    
Sbjct: 292 KMRERDDGTWSAMIKAYEQNEFLMEALSTFREM-LWRGVRPNYPSVISILTVCAALAVLD 350

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++H ++L+  F+ DVF  ++L+ MY + G  + A+++F     +D   WN+MI+GY 
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI-HLYIVKHGLEFNL 279
           Q G   +AL I  +MRL G+S D IT    L  C+ +  +  G  I +   V   +    
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              + ++++  + G++  A  +   M +E D V W +++ A
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 144/345 (41%), Gaps = 59/345 (17%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N  I   A+ G +  A   F+ M  R   S+N+++A Y ++  P  A G F  M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            DL +  +L S               G  +RR                      +  A A
Sbjct: 78  -DLASYNALIS---------------GLSLRR--------------------QTLPDAAA 101

Query: 403 VFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
               +P    V+S+ +L+ GY ++GL ++AI +FQ M E N +     +Y  +L      
Sbjct: 102 ALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV-----SYTVLLGGLLDA 156

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G + +  ++   +       DV   T ++  Y + GRI +A +LF ++P+ + V W A+I
Sbjct: 157 GRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMI 212

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +  +G+ + A   F  M +     + +++ ++L     +G V +    F+ M E    
Sbjct: 213 SGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEH--- 265

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            P       MV  FG+ G +  A    + M  R D + W A++ A
Sbjct: 266 -PVAACNAMMVG-FGQRGMVDAAKTVFEKMRERDDGT-WSAMIKA 307


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/569 (38%), Positives = 340/569 (59%), Gaps = 3/569 (0%)

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
           LD +    ++  P    + +  CA+S N+     IH ++       + F+ N+LI++Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A +VFD+M  +D+VSW S+IA Y Q++ P  A G    M +   +P+  T  SL
Sbjct: 99  CGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
              V    D      +H   ++  W  EDV +G+A++DMYA+ G ++ A AVF+ L  K+
Sbjct: 159 LKAVGAYADSGIGGQIHALAVKCDWH-EDVYVGSALLDMYARCGKMDMATAVFDKLDSKN 217

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
            +SWN LI+G+A+ G    A+ VF  M+  N       TY SI  A + +GAL QG  +H
Sbjct: 218 GVSWNALISGFARKGDGETALMVFAEMQR-NGFEATHFTYSSIFSALAGIGALEQGKWVH 276

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
           A +IK+      FV   ++DMY K G + DA  +F +V     V WN++++    +G G 
Sbjct: 277 AHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGK 336

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
           +A++ F +M   G+  + I+F+ +LTACSH GLV EG+ YF M++E + ++P ++HY  +
Sbjct: 337 EAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTV 395

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GRAG L  A  FI  MP+ P A++WGALL ACR+H N ++G  A+D +F++D ++ 
Sbjct: 396 VDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDS 455

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G  VL+ NIYA+ G W+    VR + +  G+KK P  S +E+ N V +F   + THP+ E
Sbjct: 456 GPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAE 515

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPI 771
           +IY     ++ K++  GYVPD  +VL  V+E E+E  L  HSE++A+AF +I  P  + I
Sbjct: 516 EIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATI 575

Query: 772 QIFKNLRVCGDCHNWTKFISQITEREIIV 800
           +I KN+R+CGDCH+  K+IS++ EREI++
Sbjct: 576 RIMKNIRICGDCHSAFKYISKVFEREIVI 604



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 212/396 (53%), Gaps = 9/396 (2%)

Query: 138 LTSG-LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
           L SG L P    +   + AC   +NL D +KIH  +    F  D F+  SL+H+YC+ G 
Sbjct: 42  LDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGS 101

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL-P 252
              A K+FD M  +D  SW ++I+GY Q+    EA+ +L  M       +  T AS+L  
Sbjct: 102 VVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
           V A +D+ + G  IH   VK     +++V + L++MYA+ G M  A  VFD++  ++ VS
Sbjct: 162 VGAYADSGIGG-QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           WN++I+ + +  D  TA   F  MQ+ G +    T  S+ S +A +      + VH  ++
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMI 280

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           +    +    +GN ++DMYAK G +  A  VFE +  KD+++WN+++T +AQ GL  EA+
Sbjct: 281 KSRQKLT-AFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAV 339

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
             F+ M +   I  NQ +++ IL A SH G +++G      + +  L  ++     +VD+
Sbjct: 340 SHFEEMRKSG-IYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDL 398

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
            G+ G ++ A+   +++P   ++  W A+++   +H
Sbjct: 399 LGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 183/367 (49%), Gaps = 8/367 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +++HA L  S      F    L++ Y   G +  +   FD +  +++ +W S+I+ 
Sbjct: 67  LDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAG 126

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 176
           Y +    +EA+       L    +P+ +TF  +LKA     D   G +IH   +K  +  
Sbjct: 127 YAQNDMPAEAIGLLPGM-LKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHE 185

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           DV+V ++LL MY R G  ++A  +FD +  ++  SWNA+ISG+ + G+   AL +  EM+
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
             G      T +SI    A    +  G  +H +++K   +   FV N +++MYAK G M 
Sbjct: 246 RNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMI 305

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A +VF++++ +D+V+WNS++ A+ Q      A   F  M+++GI  + ++ + + +  +
Sbjct: 306 DARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACS 365

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGN-AVVDMYAKLGIINSACAVFEGLPVKDVIS- 414
                +  +  H F M + + +E  I     VVD+  + G++N A      +P++   + 
Sbjct: 366 HGGLVKEGK--HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAV 423

Query: 415 WNTLITG 421
           W  L+  
Sbjct: 424 WGALLAA 430



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +HA ++ S +  T F    +++ YA  G +  +R  F+ +  +++ TWNSM++ 
Sbjct: 269 LEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEW 176
           + + G   EAV  F +    SG+  +  +F  +L AC +   + +GK     + +   E 
Sbjct: 329 FAQYGLGKEAVSHFEEMR-KSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEP 387

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQSGNA 225
           ++    +++ +  R GL N A      MP+  + + W A+++      NA
Sbjct: 388 EIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNA 437


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 264/809 (32%), Positives = 414/809 (51%), Gaps = 85/809 (10%)

Query: 50  FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F++  ++C    KLH  K LH  +  S        +  L++ +   GD   +R  F+ + 
Sbjct: 10  FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIH 166
             N Y+W+ +I  YV   R+ +A   F          P F  F                 
Sbjct: 70  LPNEYSWSCIIQAYVSSSRIHDARALFDSM-------PGFDAFT---------------- 106

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSGNA 225
                    W++ +AA     Y R    + AR+LF  M   RD  SW  +++GY +    
Sbjct: 107 ---------WNIMIAA-----YARINRLDDARELFHGMISGRDVVSWAILVAGYARHDRL 152

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            EA  +   M L     D +T  S+L   A + ++     +   I   G + +    N +
Sbjct: 153 EEASALFRRMPL----WDTVTCTSVLQGYAHNGHLAEAQELFDRIGGAG-DRDATACNAM 207

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           I  Y K   +  A  +F Q+  R+  SW+ ++  Y Q+     A   F  M Q     D 
Sbjct: 208 IAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQ----RDS 263

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIM---------------RRGWFME----------- 379
           +   ++T++++   + R +R +  ++                R G   E           
Sbjct: 264 IAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGDLDEVRRLFSAMEHR 323

Query: 380 ---DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
                ++   +V++Y K G ++ A  V + +PV+  +SW  +I  YAQNG A+EAI +FQ
Sbjct: 324 TVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQ 383

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGK 495
            M+      P+  T +S++ + + +G L  G +IHAR+  + L    + +   ++ MYGK
Sbjct: 384 CMD-LEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGK 442

Query: 496 CGRIDDAMSLFYQVP--RSSSVPWNAIISCHGIHGQGDKALNFFRQM-LDEGVRPDHITF 552
           CG ++ A  +F  VP    S V W A+I  +  +G G++A+  F++M +D G  P+ +TF
Sbjct: 443 CGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTF 502

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI-QNM 611
           +S+L+ACSH G + +   +F  M  +FG+ P   HY C+VDL GRAG LG A   + ++ 
Sbjct: 503 LSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHK 562

Query: 612 PVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVD 671
               D   W A L AC+++G++E    A+ R+ E++ ENV   VL+SN+YA  G+   V 
Sbjct: 563 DFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVA 622

Query: 672 EVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
            +R+  +  G+KK  G S IE+NN+V  F   + +HP+  +IY EL  L  ++K  GYVP
Sbjct: 623 RIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVP 682

Query: 732 DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFIS 791
           D   VL+DV+E++K  +L  HSERLA+A GIIS+PP + +++ KNLRVC DCH  TKFIS
Sbjct: 683 DTKMVLRDVDEEKKAQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFIS 742

Query: 792 QITEREIIVRDSNRFHHFKDGICSCGDYW 820
           QI  R+IIVRD++RFHHFKDG+CSCGDYW
Sbjct: 743 QIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771


>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/687 (35%), Positives = 381/687 (55%), Gaps = 23/687 (3%)

Query: 144 PDFYTFPPVL--KACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 201
           P  +T  P+L  +  R +      H S+L L     VF    L  + C    A++A    
Sbjct: 157 PRRFTVTPLLAFRRLRPMSTSASPHTSILHLPHRPFVFRRPRLSRLRC---FASLAPASS 213

Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
              P  D    + +I   C  G   +A  +L  +     +    T  S+L   AR+ +  
Sbjct: 214 GASPAND----DHLIQMLCAHGRLAQATALLQGL----PAPTQRTYESLLLAAARARDTA 265

Query: 262 SGLLIHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
               +H  +    +   + F+S  LI  YA    +  A +VFD+   +++  WN+++ A 
Sbjct: 266 LAAAVHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKAL 325

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLV-----SLTSIVAQLNDCRNSRSVHGFIMRRG 375
             ++    A      M + G+  D  +        + +  + L      R +H   +RRG
Sbjct: 326 ALADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRG 385

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
           + +    +   ++D YAKLGI++ A  VF  +P ++++SW+ +I  YA+N    +AI++F
Sbjct: 386 YGLH-THVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIF 444

Query: 436 Q-MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           Q MM    ++ PN  T VS+L A + V AL QG  +HA +++      V V   L+ MY 
Sbjct: 445 QEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYM 504

Query: 495 KCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
           KCG ++    +F  + R  +V  WN++IS +G+HG G ++L  F +M++EG+ P+ ITFV
Sbjct: 505 KCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFV 564

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
           S+L ACSH GLV +G++ F  M E + + P  +HY CMVDL GRAG L  A   IQ+M +
Sbjct: 565 SVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRI 623

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
           +P   +WG+LLGACRIHG++E   +A   LF+++  N G YVL+++IYA       VD +
Sbjct: 624 QPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVL 683

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           + L  +  L+K PG S IEV  K+  F + +  +P+ E++   +     +MK+ GYVPD 
Sbjct: 684 KELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDT 743

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
             VL D+EE+EKE IL  HSE+LA+AFG+I +     I+I KNLR+C DCH+ TKFIS+ 
Sbjct: 744 RSVLYDIEEEEKERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKF 803

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
           T+REI+VRD NRFHHF++G+CSC DYW
Sbjct: 804 TDREIVVRDVNRFHHFRNGVCSCRDYW 830



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 142/290 (48%), Gaps = 26/290 (8%)

Query: 80  FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
           F ST+L+  YA L  L  +R  FD    +N++ WN+M+          EA+ C       
Sbjct: 285 FLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRL 344

Query: 140 SGLRPDFYTFPPVLKACRNLVDG--------KKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
            G+  D Y++   LKAC              +++H   ++ G+     VA +L+  Y + 
Sbjct: 345 -GVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKL 403

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVAS 249
           G+ + A ++F  MP R+  SW+AMI  Y ++    +A+ I  EM      + P  IT+ S
Sbjct: 404 GIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVS 463

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MER 308
           +L  CA  + +  G ++H YI++ G +  + V N L+ MY K G +     +F+ +   R
Sbjct: 464 VLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRR 523

Query: 309 DVVSWNSIIAAYEQSNDPITAHGF-------FTTMQQAGIQPDLLTLVSL 351
           +VVSWNS+I+ Y         HGF       F  M + GI P+++T VS+
Sbjct: 524 NVVSWNSLISGYGM-------HGFGRESLQVFEEMIEEGISPNIITFVSV 566



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 6/263 (2%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           V+ +HA  +  G       +T L++ YA LG +S++   F  +  RN+ +W++MI  Y +
Sbjct: 374 VREMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAK 433

Query: 123 CGRLSEAVDCFYQFTLTSG-LRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDV 178
             R  +A+  F +   +   L P+  T   VL AC     L  GK +H  +L+ GF+  V
Sbjct: 434 NERPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLV 493

Query: 179 FVAASLLHMYCRFGLANVARKLFDDM-PVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            V  +L+ MY + G     R +F+ +   R+  SWN++ISGY   G   E+L + +EM  
Sbjct: 494 SVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIE 553

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
           EG+S + IT  S+L  C+    +  G  +   +V++ +         ++++  + G +  
Sbjct: 554 EGISPNIITFVSVLGACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDE 613

Query: 298 ALRVFDQM-MERDVVSWNSIIAA 319
           A+ +   M ++     W S++ A
Sbjct: 614 AVELIQSMRIQPSPQVWGSLLGA 636


>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/557 (39%), Positives = 335/557 (60%), Gaps = 3/557 (0%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           +H +I+K GL ++ F  +NL+   A  ++G M +A  +F Q+ E     +N++I     S
Sbjct: 50  VHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNS 109

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
            D   A   +  M + GI+PD  T   +    + L   +    +H  +   G  + DV +
Sbjct: 110 MDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEV-DVFV 168

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            N ++ MY K G I  A  VFE +  K V SW+++I  +A   +  E + +   M     
Sbjct: 169 QNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGR 228

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
               +   VS L A +H+G+   G  IH  +++N    +V V T L+DMY KCG ++  +
Sbjct: 229 HRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGL 288

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F  +   +   +  +I+   IHG+G +AL  F  ML+EG+ PD + +V +L+ACSH+G
Sbjct: 289 CVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAG 348

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
           LV EG + F+ MQ E  IKP ++HYGCMVDL GRAG L  A++ I++MP++P+  +W +L
Sbjct: 349 LVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSL 408

Query: 624 LGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLK 683
           L AC++H N+E+G +A+D +F+++  N G Y++++N+YA   KW  V  +R+   ++ L 
Sbjct: 409 LSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLV 468

Query: 684 KTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           +TPG+S +E N  V  F + +++ P+ E IYD ++ +  ++K  GY PD S VL DV+ED
Sbjct: 469 QTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDED 528

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EK   L  HS++LAIAF +I +   SP++I +NLR+C DCH +TKFIS I EREI VRDS
Sbjct: 529 EKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDS 588

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHFKDG CSC DYW
Sbjct: 589 NRFHHFKDGTCSCKDYW 605



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 9/382 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH--MYCRFGLANVARKLFDDMPVRDS 209
           +LK C+++ + KK+H  +LKLG  +D F  ++L+      R+G    A  +F  +    S
Sbjct: 37  LLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGS 96

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             +N MI G   S +  EAL +  EM   G+  D  T   +L  C+    +  G+ IH +
Sbjct: 97  FEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAH 156

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           +   GLE ++FV N LI+MY K G + HA  VF+QM E+ V SW+SII A+         
Sbjct: 157 VFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHEC 216

Query: 330 HGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
                 M + G  + +   LVS  S    L      R +HG ++R    + +V++  +++
Sbjct: 217 LMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISEL-NVVVKTSLI 275

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPN 447
           DMY K G +     VF+ +  K+  S+  +I G A +G   EA+ VF  M+EE   + P+
Sbjct: 276 DMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEE--GLTPD 333

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
              YV +L A SH G +++G +   R+  ++ +   +    C+VD+ G+ G + +A  L 
Sbjct: 334 DVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLI 393

Query: 507 YQVP-RSSSVPWNAIISCHGIH 527
             +P + + V W +++S   +H
Sbjct: 394 KSMPIKPNDVVWRSLLSACKVH 415



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 181/411 (44%), Gaps = 14/411 (3%)

Query: 19  LLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKT 78
           L Q+H  L S   + LQ S   L  +  E  +  L + C  +   K++HA ++  G    
Sbjct: 7   LCQSH--LLSLPNSPLQSSE--LNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLFYD 62

Query: 79  VFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
            F  + LV   A    G + ++   F  I     + +N+MI   V    L EA+   Y  
Sbjct: 63  SFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEAL-LLYVE 121

Query: 137 TLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
            L  G+ PD +T+P VLKAC  LV   +G +IH  V   G E DVFV   L+ MY + G 
Sbjct: 122 MLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGA 181

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV-SMDPITVASILP 252
              A  +F+ M  +   SW+++I  +       E L +L +M  EG    +   + S L 
Sbjct: 182 IEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALS 241

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            C    +   G  IH  ++++  E N+ V  +LI+MY K G +   L VF  M  ++  S
Sbjct: 242 ACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYS 301

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           +  +IA          A   F+ M + G+ PD +  V + S  +     +        + 
Sbjct: 302 YTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQ 361

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITG 421
                   +     +VD+  + G++  A  + + +P+K  DV+ W +L++ 
Sbjct: 362 FEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVV-WRSLLSA 411


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 260/800 (32%), Positives = 424/800 (53%), Gaps = 46/800 (5%)

Query: 61  HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVY 120
           H  K +HA L+   +  T  S+  L++ Y  L     +   F  +   NV ++ ++IS +
Sbjct: 81  HLAKTVHATLLKRDEEDTHLSNA-LISTYLKLNLFPHALRLFLSLPSPNVVSYTTLIS-F 138

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD----GKKIHCSVLKLGFEW 176
           +   R   A+  F + T  S L P+ YT+  VL AC +L+     G ++H + LK     
Sbjct: 139 LSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFD 198

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
             FVA +L+ +Y +    + A KLF+ +P RD  SWN +IS   Q      A  +   M+
Sbjct: 199 SPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQ 258

Query: 237 -LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG-- 293
             +   +D  T++ +L   A   +++ G  +H + VK GLE +L V N LI  Y+KFG  
Sbjct: 259 ATDAFRVDDFTLSILLTASA---SLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNV 315

Query: 294 -----------------------------MMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
                                        ++  AL+VFD+M E++ VS+N+++A + ++ 
Sbjct: 316 DDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNE 375

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
               A   F  M + G++    +L S+      L D + S+ VHGF ++ G F  +  + 
Sbjct: 376 QGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFG-FGSNGYVE 434

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVIS--WNTLITGYAQNGLASEAIEVFQMMEECN 442
            A++DMY + G +  A  +F    +++  S  W  +I GYA+NG   EAI +F +     
Sbjct: 435 AALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDG 494

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
           ++  ++    S+L     +G L  G +IH  VIK  L F++ V   +V MY KCG +DDA
Sbjct: 495 KVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDA 554

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
           M +F  +P +  V WN +IS + +H QGD+AL  + +ML EG++P+ +TFV +++A   +
Sbjct: 555 MKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQT 614

Query: 563 GL--VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
            L  V + +  F+ M+  + I+P  +HY   + + G  G L  A   I NMP +P A +W
Sbjct: 615 NLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVW 674

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
             LL  CR+H N  +G  A+  +  ++ ++   ++L+SN+Y+  G+W+  + VR   R++
Sbjct: 675 RVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREK 734

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G +K P  S I    K++ FY  +R+HP+ + I   L  L  +   +GY PD SFVL +V
Sbjct: 735 GFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEV 794

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           EE  K+  L  HS +LA  +GI+ + P  PI+I KN+ +CGDCH + K+ S +T+R+I +
Sbjct: 795 EEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFL 854

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RDS+ FH F +G CSC D W
Sbjct: 855 RDSSGFHCFSNGQCSCKDCW 874



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 229/502 (45%), Gaps = 54/502 (10%)

Query: 1   MFRLAPSCKDRRLCKLLPLLQAHRP-----LFSAAANSLQISPDCLENESREIDFDDLFQ 55
           +F   PS        L+  L  HR      LF        + P+       E  +  +  
Sbjct: 120 LFLSLPSPNVVSYTTLISFLSKHRQHHALHLFLRMTTRSHLPPN-------EYTYVAVLT 172

Query: 56  SCTKL-HHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           +C+ L HH     +LHA  + +    + F +  LV+ YA       +   F+ I  R++ 
Sbjct: 173 ACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIA 232

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
           +WN++IS  ++      A   F     T   R D +T   +L A  +L++G+++H   +K
Sbjct: 233 SWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLMEGQQVHAHAVK 292

Query: 172 LGFEWDVFVAASLLHMYCRFG-------------------------------LANVARKL 200
           LG E D+ V   L+  Y +FG                               L N+A K+
Sbjct: 293 LGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKV 352

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FD+MP ++S S+N +++G+C++    EA+ +   M  EG+ +   ++ S++  C    + 
Sbjct: 353 FDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDY 412

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSIIA 318
                +H + VK G   N +V   L++MY + G M  A ++F   ++ E   V W ++I 
Sbjct: 413 KVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMIC 472

Query: 319 AYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
            Y ++  P  A   F   +  G +  D +   S+  +   +      + +H  +++ G  
Sbjct: 473 GYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLG 532

Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-Q 436
             ++ +GNAVV MY K G ++ A  VF  +P  D+++WNTLI+G   +     A+E++ +
Sbjct: 533 F-NLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVE 591

Query: 437 MMEECNEINPNQGTYVSILPAY 458
           M+ E   I PNQ T+V I+ AY
Sbjct: 592 MLGE--GIKPNQVTFVLIISAY 611



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 191/419 (45%), Gaps = 43/419 (10%)

Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
           L V +RS +      +H  ++K   E +  +SN LI+ Y K  +  HALR+F  +   +V
Sbjct: 71  LHVSSRSGDTHLAKTVHATLLKRDEE-DTHLSNALISTYLKLNLFPHALRLFLSLPSPNV 129

Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS-LTSIVAQLNDCRNSRSVHG 369
           VS+ ++I+   +       H F     ++ + P+  T V+ LT+  + L+       +H 
Sbjct: 130 VSYTTLISFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHA 189

Query: 370 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
             ++   F +   + NA+V +YAK    ++A  +F  +P +D+ SWNT+I+   Q+ L  
Sbjct: 190 AALKTAHF-DSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYD 248

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
            A  +F+ M+  +    +  T   +L A +   +L +G ++HA  +K  L  D+ V   L
Sbjct: 249 TAFRLFRNMQATDAFRVDDFTLSILLTASA---SLMEGQQVHAHAVKLGLETDLNVGNGL 305

Query: 490 VDMYGKCGRIDD-------------------------------AMSLFYQVPRSSSVPWN 518
           +  Y K G +DD                               A+ +F ++P  +SV +N
Sbjct: 306 IGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYN 365

Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ--RYFHMMQ 576
            +++    + QG +A+  F +M++EG+     +  S++ AC   GL+ + +  +  H   
Sbjct: 366 TVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDAC---GLLGDYKVSKQVHGFA 422

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS-IWGALLGACRIHGNME 634
            +FG   +      ++D++ R G +  A        +   +S +W A++     +G  E
Sbjct: 423 VKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPE 481



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 159/349 (45%), Gaps = 17/349 (4%)

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           + P+  +L+    + ++  D   +++VH  +++R    ED  + NA++  Y KL +   A
Sbjct: 60  LPPESHSLLHALHVSSRSGDTHLAKTVHATLLKRD--EEDTHLSNALISTYLKLNLFPHA 117

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             +F  LP  +V+S+ TLI+ +        A+ +F  M   + + PN+ TYV++L A S 
Sbjct: 118 LRLFLSLPSPNVVSYTTLIS-FLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSS 176

Query: 461 V-GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
           +      G+++HA  +K       FVA  LV +Y K      A+ LF Q+PR     WN 
Sbjct: 177 LLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNT 236

Query: 520 IISCHGIHGQGDKALNFFRQM-LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
           IIS        D A   FR M   +  R D  T   LLTA   S  + EGQ+  H    +
Sbjct: 237 IISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTA---SASLMEGQQ-VHAHAVK 292

Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
            G++  L     ++  + + G++       + M VR D   W  ++ A    G + L   
Sbjct: 293 LGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVR-DVITWTEMVTAYMEFGLVNLALK 351

Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR--DRGLKKT 685
             D + E +S  V Y  +++    N    +G + +R   R  + GL+ T
Sbjct: 352 VFDEMPEKNS--VSYNTVLAGFCRNE---QGFEAMRLFVRMVEEGLELT 395


>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
 gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
          Length = 578

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 339/560 (60%), Gaps = 9/560 (1%)

Query: 266 IHLYIVKHGLEFNLFVS---NNLINMYA-KFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           +H ++   G +F L +S   + L+ +YA   G +  A+  F Q+       WN+II  + 
Sbjct: 23  LHAHLFTTG-QFRLPISPARSKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFI 81

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           QS +P  A  ++ +M     + D LT   +    A++     S  +H  I+R+G F+ D 
Sbjct: 82  QSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIVRKG-FIADA 140

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
           ++G  ++D+YAK+G I+SA  VF+ +  +D+ SWN LI+G+AQ    +EA+ +F+ ME  
Sbjct: 141 LLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRME-I 199

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
           +   PN+ + +  L A + +G  ++G KIH  +       +  V   ++DMY KCG +D 
Sbjct: 200 DGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDK 259

Query: 502 AMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           A  +F  +  R   V WN +I    +HG+G KAL  F +M   GV PD ++++++L AC+
Sbjct: 260 AYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACN 319

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H GLV EG R F+ M E  G+KP++KHYG +VDL GRAG L  A++ + +MP  PD  +W
Sbjct: 320 HGGLVEEGFRLFNSM-ENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLW 378

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
             LLGA R H N+E+    S +L E+ S + G +VL+SN+YA   +W  V  VR   ++R
Sbjct: 379 QTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNR 438

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
            +KK PG S IE N  +  FY  +++H  + +IY +L  +  ++K  GYV + SFVL D+
Sbjct: 439 DVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHDI 498

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
            E++KE++L  HSE+LA+AFG+IS+   +PIQ+ KNLR+CGDCH   K IS+I +REIIV
Sbjct: 499 GEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIV 558

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD  RFH FK+G CSC DYW
Sbjct: 559 RDRVRFHRFKEGFCSCRDYW 578



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 206/388 (53%), Gaps = 9/388 (2%)

Query: 163 KKIHCSVLKLG-FEWDVFVAAS-LLHMYC-RFGLANVARKLFDDMPVRDSGSWNAMISGY 219
           K++H  +   G F   +  A S LL +Y    G  + A   F  +    +  WNA+I G+
Sbjct: 21  KQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGF 80

Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
            QS N   A      M  +   +D +T + +L  CAR    L  + IH +IV+ G   + 
Sbjct: 81  IQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADA 140

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
            +   L+++YAK G +  A +VFD+M++RD+ SWN++I+ + Q + P  A   F  M+  
Sbjct: 141 LLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEID 200

Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
           G +P+ ++++   S  AQL D +    +HG+I    + M +  + N V+DMYAK G ++ 
Sbjct: 201 GFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDM-NAQVCNVVIDMYAKCGFVDK 259

Query: 400 ACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
           A  VFE +   KD+++WNT+I  +A +G   +A+E+F+ M++   ++P+  +Y+++L A 
Sbjct: 260 AYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSG-VSPDDVSYLAVLCAC 318

Query: 459 SHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS-VP 516
           +H G + +G ++    ++NC +  +V     +VD+ G+ GR+ +A  +   +P     V 
Sbjct: 319 NHGGLVEEGFRLF-NSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVL 377

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEG 544
           W  ++     H   + A    R++++ G
Sbjct: 378 WQTLLGASRTHRNVEIAETVSRKLVEMG 405



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 196/390 (50%), Gaps = 32/390 (8%)

Query: 50  FDDLFQSCTKLH--HVKRLHALLVVSGKIKTVFS--STKLVNFYA-NLGDLSFSRHTFDH 104
            D     CT L   H K+LHA L  +G+ +   S   +KL+  YA +LG+LSF+  TF  
Sbjct: 5   LDSFLSKCTTLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQ 64

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VD 161
           I   +   WN++I  +++    + A   +Y+  ++   + D  T   VLKAC  +   ++
Sbjct: 65  IRTPSTNDWNAIIRGFIQSPNPTNAF-AWYKSMISKSRKVDALTCSFVLKACARVLARLE 123

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
             +IH  +++ GF  D  +  +LL +Y + G  + A K+FD+M  RD  SWNA+ISG+ Q
Sbjct: 124 SIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQ 183

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
                EAL +   M ++G   + I+V   L  CA+  +   G  IH YI     + N  V
Sbjct: 184 GSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQV 243

Query: 282 SNNLINMYAKFGMMRHALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            N +I+MYAK G +  A  VF+ M   +D+V+WN++I A+    +   A   F  M Q+G
Sbjct: 244 CNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSG 303

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW----FMEDVIIG------NAVVDM 390
           + PD +      S +A L  C      HG ++  G+     ME+  +        +VVD+
Sbjct: 304 VSPDDV------SYLAVLCACN-----HGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDL 352

Query: 391 YAKLGIINSACAVFEGLP-VKDVISWNTLI 419
             + G ++ A  +   +P V D++ W TL+
Sbjct: 353 LGRAGRLHEAYDIVNSMPTVPDIVLWQTLL 382



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 129/260 (49%), Gaps = 6/260 (2%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           ++H  +V  G I      T L++ YA +G++  +   FD +  R++ +WN++IS + +  
Sbjct: 126 QIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGS 185

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVA 181
           + +EA+  F +  +  G +P+  +    L AC  L D   G+KIH  +    F+ +  V 
Sbjct: 186 KPTEALSLFKRMEI-DGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVC 244

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             ++ MY + G  + A  +F+ M  R D  +WN MI  +   G   +AL++ ++M   GV
Sbjct: 245 NVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGV 304

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
           S D ++  ++L  C     +  G  +   +   G++ N+    +++++  + G +  A  
Sbjct: 305 SPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYD 364

Query: 301 VFDQM-MERDVVSWNSIIAA 319
           + + M    D+V W +++ A
Sbjct: 365 IVNSMPTVPDIVLWQTLLGA 384


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/676 (36%), Positives = 371/676 (54%), Gaps = 42/676 (6%)

Query: 149 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           +  +++ C   +++ D  KI    LK GF   +     L+  Y + G    ARK+FD++P
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 138

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R   +WN+MI+ Y ++G + EA+DI   M  +G+  D  T +S+    +    +  G  
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198

Query: 266 IHLYIVKHGLEF-NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
            H   V  G+   N+FV + L++MYAKFG MR A  V DQ++ +DVV + ++I  Y    
Sbjct: 199 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 258

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +   +   F  M + GI+ +  TL S+      L D  + R +HG I++ G         
Sbjct: 259 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG--------- 309

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
                                   ++  ++W ++I G  QNG    A+  F+ M   + I
Sbjct: 310 ------------------------LESAVTWTSVIVGLVQNGREEIALLKFRQMLR-SSI 344

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
            PN  T  S+L A S +  L QG +IHA V+K  L  D +V   L+D YGKCG  + A S
Sbjct: 345 TPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARS 404

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           +F  +     V  N++I  +  +G G +AL  F  M D G+ P+++T++ +L+AC+++GL
Sbjct: 405 VFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGL 464

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           + EG   F   +    I+    HY CMVDL GRAG L  A   I  + +  D  IW  LL
Sbjct: 465 LEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLL 523

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            ACRIHG++E+     +R+ ++  E+ G +VL+SN+YA+ G W  V E++S  R+  LKK
Sbjct: 524 SACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKK 583

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            P  S ++V  ++  F  G+ +HP +  I ++L  L  K+K LGYVPD  FVLQD++E++
Sbjct: 584 NPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEK 643

Query: 745 KEHILTSHSERLAIAFGIISSPPK-SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           K   L  HSE+LA+AF +  S  K + I+I KNLRVCGDCH W KF+S+I  R+II RD 
Sbjct: 644 KIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDV 703

Query: 804 NRFHHFKDGICSCGDY 819
            RFHHF++G+CSCGDY
Sbjct: 704 KRFHHFRNGLCSCGDY 719



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 256/531 (48%), Gaps = 56/531 (10%)

Query: 22  AHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFS 81
           A +  F+ A N    S      ES ++ +  L Q C  +  +  +    + S  +K  F 
Sbjct: 60  AAKSFFATAHNGASFS------ESLQL-YSSLIQQCIGIKSITDITK--IQSHALKRGFH 110

Query: 82  ST---KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
            +   KL++ Y   G + ++R  FD + +R++  WNSMI+ Y+R GR  EA+D  YQ  +
Sbjct: 111 HSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAID-IYQRMV 169

Query: 139 TSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFE-WDVFVAASLLHMYCRFGLA 194
             G+ PD +TF  V KA  +L    +G++ H   + LG    +VFV ++L+ MY +FG  
Sbjct: 170 PDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKM 229

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             AR + D +  +D   + A+I GY   G   E+L +   M  +G+  +  T++S+L  C
Sbjct: 230 RDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCC 289

Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
              +++ SG LIH  IVK GLE                                  V+W 
Sbjct: 290 GNLEDLTSGRLIHGLIVKAGLE--------------------------------SAVTWT 317

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           S+I    Q+     A   F  M ++ I P+  TL S+    + L      + +H  +M+ 
Sbjct: 318 SVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF 377

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G  + D  +G A++D Y K G    A +VF GL   DV+S N++I  YAQNG   EA+++
Sbjct: 378 GLDI-DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQL 436

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI--HARVIKNC-LCFDVFVATCLVD 491
           F  M++   + PN  T++ +L A ++ G L +G  I   AR   N  L  D +   C+VD
Sbjct: 437 FSGMKDTG-LEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHY--ACMVD 493

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           + G+ GR+ +A  L  QV  S  V W  ++S   IHG  + A     +++D
Sbjct: 494 LLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVID 544


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/606 (36%), Positives = 354/606 (58%), Gaps = 52/606 (8%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGM----MRHALRVFDQMMERDVVSWNSIIAAYE 321
           IH   +K G   +   +  ++   A   +    + +A ++F+QM +R+  SWN+II  + 
Sbjct: 42  IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101

Query: 322 QSNDP---ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-- 376
           +S++    I    F+  M    ++P+  T  S+    A+    +  + +HG  ++ G+  
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161

Query: 377 ----------------FMED--------------------------VIIGNAVVDMYAKL 394
                           FM+D                          +++ N ++D Y +L
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221

Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
           G   +A  +F+ +  + V+SWNT+I+GY+ NG   +A+EVF+ M++  +I PN  T VS+
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK-GDIRPNYVTLVSV 280

Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
           LPA S +G+L  G  +H     + +  D  + + L+DMY KCG I+ A+ +F ++PR + 
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340

Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
           + W+A+I+   IHGQ   A++ F +M   GVRP  + +++LLTACSH GLV EG+RYF  
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400

Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
           M    G++P ++HYGCMVDL GR+G L  A  FI NMP++PD  IW ALLGACR+ GN+E
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460

Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
           +G   ++ L ++   + G YV +SN+YA+ G W  V E+R   +++ ++K PG S I+++
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520

Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
             +  F   + +HPK ++I   L  ++ K++  GY P  + VL ++EE++KE++L  HSE
Sbjct: 521 GVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSE 580

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           ++A AFG+IS+ P  PI+I KNLR+C DCH+  K IS++ +R+I VRD  RFHHF+DG C
Sbjct: 581 KIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSC 640

Query: 815 SCGDYW 820
           SC DYW
Sbjct: 641 SCMDYW 646



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 157/566 (27%), Positives = 257/566 (45%), Gaps = 78/566 (13%)

Query: 151 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL----ANVARKLFDDMPV 206
           P +  CR + D  +IH   +K G   D   AA +L       L     + A K+F+ MP 
Sbjct: 28  PQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87

Query: 207 RDSGSWNAMISGYCQSG--NAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSG 263
           R+  SWN +I G+ +S    A+ A+ +  EM   E V  +  T  S+L  CA++  I  G
Sbjct: 88  RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA------------------------- 298
             IH   +K+G   + FV +NL+ MY   G M+ A                         
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207

Query: 299 -----------LR---------VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
                      +R         +FD+M +R VVSWN++I+ Y  +     A   F  M++
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
             I+P+ +TLVS+   +++L        +H +    G  ++DV +G+A++DMY+K GII 
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIE 326

Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
            A  VFE LP ++VI+W+ +I G+A +G A +AI+ F  M +   + P+   Y+++L A 
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTAC 385

Query: 459 SHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
           SH G + +G +  ++++  + L   +    C+VD+ G+ G +D+A      +P +   V 
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445

Query: 517 WNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
           W A++    + G    G +  N    M    V  D   +V+L    +  G  SE      
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDM----VPHDSGAYVALSNMYASQGNWSEVSEMRL 501

Query: 574 MMQEEFGIKPHLKHYGC-MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL----GACR 628
            M+E    K   K  GC ++D+       G+ H F+      P A    ++L       R
Sbjct: 502 RMKE----KDIRKDPGCSLIDID------GVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551

Query: 629 IHGNMELGAVASDRLFEVDSENVGYY 654
           + G   +       L E D ENV +Y
Sbjct: 552 LAGYRPITTQVLLNLEEEDKENVLHY 577



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 211/465 (45%), Gaps = 63/465 (13%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG----DLSFSRHTFDHISYRNVY 111
           +C  +  + ++HA+ + SG+++   ++ +++ F A       DL ++   F+ +  RN +
Sbjct: 32  NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91

Query: 112 TWNSMISVYVRCGRLSE--AVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
           +WN++I  +          A+  FY+      + P+ +TFP VLKAC     + +GK+IH
Sbjct: 92  SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151

Query: 167 CSVLKLGFEWDVFVAASLLHMYC------------------------------------- 189
              LK GF  D FV ++L+ MY                                      
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211

Query: 190 --------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
                   R G    AR LFD M  R   SWN MISGY  +G   +A+++  EM+   + 
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
            + +T+ S+LP  +R  ++  G  +HLY    G+  +  + + LI+MY+K G++  A+ V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331

Query: 302 FDQMMERDVVSWNSII---AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
           F+++   +V++W+++I   A + Q+ D I     F  M+QAG++P  +  ++L +  +  
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDC---FCKMRQAGVRPSDVAYINLLTACSHG 388

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
                 R     ++        +     +VD+  + G+++ A      +P+K D + W  
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
           L+      G       V  ++   + +  + G YV++   Y+  G
Sbjct: 449 LLGACRMQGNVEMGKRVANIL--MDMVPHDSGAYVALSNMYASQG 491



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 57/333 (17%)

Query: 354 IVAQLNDCRNSR---SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI----INSACAVFEG 406
           +  Q+N+CR  R    +H   ++ G  M D +    ++   A   +    ++ A  +F  
Sbjct: 26  LFPQINNCRTIRDLSQIHAVFIKSGQ-MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84

Query: 407 LPVKDVISWNTLITGYAQNG--LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           +P ++  SWNT+I G++++    A  AI +F  M     + PN+ T+ S+L A +  G +
Sbjct: 85  MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY----------------- 507
           ++G +IH   +K     D FV + LV MY  CG + DA  LFY                 
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204

Query: 508 ----------------------------QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
                                       ++ + S V WN +IS + ++G    A+  FR+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M    +RP+++T VS+L A S  G +  G+ + H+  E+ GI+        ++D++ + G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCG 323

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
            +  A +  + +P R +   W A++    IHG 
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIHGQ 355


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 252/716 (35%), Positives = 401/716 (56%), Gaps = 28/716 (3%)

Query: 35  QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
            +SPD       +  F  + ++C  L++V     +H      G    +F  + L+  YA+
Sbjct: 140 NVSPD-------KYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYAD 192

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF----- 146
            G +  +R  FD +  R+   WN M+  YV+ G  + A+  F       G+R  +     
Sbjct: 193 NGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTF------CGMRTSYSMVNS 246

Query: 147 YTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
            T+  +L  C        G ++H  V+  GFE+D  VA +L+ MY + G    ARKLF+ 
Sbjct: 247 VTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNT 306

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           MP  D+ +WN +I+GY Q+G   EA  + + M   GV  D +T AS LP    S ++   
Sbjct: 307 MPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC 366

Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
             +H YIV+H + F++++ + LI++Y K G +  A ++F Q    DV    ++I+ Y   
Sbjct: 367 KEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLH 426

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI- 382
              I A   F  + Q G+ P+ LT+ S+    A L   +  + +H  I+++   +E+++ 
Sbjct: 427 GLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQ--LENIVN 484

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +G+A+ DMYAK G ++ A   F  +   D I WN++I+ ++QNG    A+++F+ M    
Sbjct: 485 VGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSG 544

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
               +  +  S L + +++ AL  G ++H  VI+N    D FVA+ L+DMY KCG++  A
Sbjct: 545 A-KFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALA 603

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
             +F  +   + V WN+II+ +G HG   + L+ F +ML  GV PDH+TF+ +++AC H+
Sbjct: 604 RCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHA 663

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
           GLV EG  YFH M  E+GI   ++HY CMVDL+GRAG L  A + I++MP  PDA +WG 
Sbjct: 664 GLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGT 723

Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGL 682
           LLGACR+HGN+EL  +AS  L E+D +N GYYVL+SN++A+ G+W  V +VR L +++G+
Sbjct: 724 LLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGV 783

Query: 683 KKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ 738
           +K PG+S I+VN    +F      HP+  +IY  L +L  +++  GYVP     L 
Sbjct: 784 QKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGYVPQPYLPLH 839



 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 202/741 (27%), Positives = 358/741 (48%), Gaps = 44/741 (5%)

Query: 9   KDRRLCKLLPLLQAHRPLFSAAA----NSLQISPDCLENESREIDFDDLFQSCTK---LH 61
           +   LC +  L  +   L   A     N++   P+  +  + +++   LF++C+    + 
Sbjct: 4   RTTNLCSIFRLAFSRSKLMHTAGTSICNNVMSKPETQDYLTTQLE--SLFRACSDASVVQ 61

Query: 62  HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
             +++H  ++V G       S++++  Y   G +S   + F  +   N   WN MI    
Sbjct: 62  QARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLY 121

Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDV 178
             G    A+  FY   L S + PD YTFP V+KAC  L +      +H +   LGF  D+
Sbjct: 122 MLGWFDFAL-LFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDL 180

Query: 179 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 238
           FV ++L+ +Y   G    AR++FD++P RD+  WN M+ GY +SG+   A+     MR  
Sbjct: 181 FVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTS 240

Query: 239 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
              ++ +T   IL +CA       G  +H  ++  G EF+  V+N L+ MY+K G +  A
Sbjct: 241 YSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDA 300

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
            ++F+ M + D V+WN +IA Y Q+     A   F  M  AG++PD +T  S    + + 
Sbjct: 301 RKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILES 360

Query: 359 NDCRNSRSVHGFIMR-RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
              R+ + VH +I+R R  F  DV + +A++D+Y K G +  A  +F+   + DV     
Sbjct: 361 GSLRHCKEVHSYIVRHRVPF--DVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTA 418

Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
           +I+GY  +GL  +AI  F+ + +   + PN  T  S+LPA + + AL+ G ++H  ++K 
Sbjct: 419 MISGYVLHGLNIDAINTFRWLIQEGMV-PNSLTMASVLPACAALAALKLGKELHCDILKK 477

Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
            L   V V + + DMY KCGR+D A   F ++  + S+ WN++IS    +G+ + A++ F
Sbjct: 478 QLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLF 537

Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFG 596
           RQM   G + D ++  S L++ ++   +  G+  + ++++  F     +     ++D++ 
Sbjct: 538 RQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVA--SALIDMYS 595

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE-----VDSENV 651
           + G L +A      M  + + S W +++ A   +GN        D   E     V  ++V
Sbjct: 596 KCGKLALARCVFNLMAGKNEVS-WNSIIAA---YGNHGCARECLDLFHEMLRAGVHPDHV 651

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
            + V++S         EG+     + R+ G+    G         VD++    R H  ++
Sbjct: 652 TFLVIISACGHAGLVGEGIHYFHCMTREYGI----GARMEHYACMVDLYGRAGRLHEAFD 707

Query: 712 KIYDELRNLTAKMKSLGYVPD 732
            I           KS+ + PD
Sbjct: 708 AI-----------KSMPFTPD 717


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/560 (40%), Positives = 337/560 (60%), Gaps = 4/560 (0%)

Query: 263 GLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
           G  IH   ++ G L  + FVS   ++MY K G ++ A  +F +M  R+VV+WN+++    
Sbjct: 30  GPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAV 89

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
               P+     +  +++AG  P++++  +  +  A           HGF+++ G+ M DV
Sbjct: 90  LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM-DV 148

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
            + N++VD Y K      A AVF+G+ V++ +SW +++  YAQNG   EA   +      
Sbjct: 149 SVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRS 208

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
            E  P      S L   + +  L  G  +HA  +++C+  ++FVA+ LVDMYGKCG ++D
Sbjct: 209 GE-EPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVED 267

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACS 560
           A  +FY+ P+ + V WNA+I  +   G    AL  F  M+  G   P++IT V+++T+CS
Sbjct: 268 AEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS 327

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
             GL  +G   F  M+E FGI+P  +HY C+VDL GRAG    A+  IQ MP+RP  S+W
Sbjct: 328 RGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVW 387

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           GALLGAC++HG  ELG +A+++LFE+D ++ G +VL+SN++A+ G+W    ++R   ++ 
Sbjct: 388 GALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNV 447

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+KK PG S +   N V +F   +  H  Y +I   L  L  +M++ GY+PD  + L D+
Sbjct: 448 GIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDL 507

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           EE+EKE  +  HSE+LA+AFG+I  PP  PI+I KNLR+C DCH   KFIS I  REIIV
Sbjct: 508 EEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIV 567

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD+NRFHHFK   CSCGDYW
Sbjct: 568 RDNNRFHHFKQYQCSCGDYW 587



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 199/404 (49%), Gaps = 14/404 (3%)

Query: 138 LTSGLRPDFYTFPPVLKACRNL----VDGKKIHCSVLKLGF-EWDVFVAASLLHMYCRFG 192
           L  GLRP+ +TFP   KA  +       G +IH   ++ G+   D FV+ + L MY + G
Sbjct: 2   LRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTG 61

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
              +AR LF +MP R+  +WNA+++     G  +E ++    +R  G   + ++  +   
Sbjct: 62  RLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFN 121

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            CA +  +  G   H ++VK G E ++ V N++++ Y K      A  VFD M  R+ VS
Sbjct: 122 ACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVS 181

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           W S++AAY Q+     A   +   +++G +P    + S  +  A L      R++H  + 
Sbjct: 182 WCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHA-VA 240

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
            R     ++ + +A+VDMY K G +  A  +F   P +++++WN +I GYA  G A  A+
Sbjct: 241 VRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNAL 300

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT----C 488
            VF  M    E  PN  T V+++ + S  G  + G ++   + +    F +   T    C
Sbjct: 301 LVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRER---FGIEPRTEHYAC 357

Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGD 531
           +VD+ G+ G  + A  +   +P   S+  W A++    +HG+ +
Sbjct: 358 VVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 401



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 65  RLHALLVVSGKIKT-VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           ++H+L +  G +    F S   ++ Y   G L  +RH F  +  RNV  WN++++  V  
Sbjct: 32  QIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLD 91

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           GR  E ++ ++      GL P+  +      AC     L  G++ H  V+K GFE DV V
Sbjct: 92  GRPLETIEAYFGLREAGGL-PNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 150

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             S++  Y +   A  AR +FD M VR+S SW +M++ Y Q+G   EA       R  G 
Sbjct: 151 LNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGE 210

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
                 V+S L  CA    +  G  +H   V+  ++ N+FV++ L++MY K G +  A +
Sbjct: 211 EPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQ 270

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLN 359
           +F +  +R++V+WN++I  Y    D   A   F  M ++G   P+ +TLV++ +  ++  
Sbjct: 271 IFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGG 330

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 418
             ++   +   +  R            VVD+  + G+   A  V +G+P++  IS W  L
Sbjct: 331 LTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGAL 390

Query: 419 ITGYAQNG 426
           +     +G
Sbjct: 391 LGACKMHG 398



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 10/276 (3%)

Query: 53  LFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
            F +C    ++   ++ H  +V  G    V     +V+FY        +R  FD +  RN
Sbjct: 119 FFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRN 178

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
             +W SM++ Y + G   EA    Y     SG  P  +     L  C  L+    G+ +H
Sbjct: 179 SVSWCSMVAAYAQNGAEEEAFAA-YLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALH 237

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              ++   + ++FVA++L+ MY + G    A ++F + P R+  +WNAMI GY   G+A 
Sbjct: 238 AVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQ 297

Query: 227 EALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNN 284
            AL + D+M   G  + + IT+ +++  C+R      G  L      + G+E        
Sbjct: 298 NALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYAC 357

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVS-WNSIIAA 319
           ++++  + GM   A  V   M  R  +S W +++ A
Sbjct: 358 VVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGA 393



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 41/225 (18%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           LH  + LHA+ V S     +F ++ LV+ Y   G +  +   F     RN+ TWN+MI  
Sbjct: 230 LHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGG 289

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVL-KLGFE 175
           Y   G    A+  F     +    P++ T   V+ +C       DG ++  ++  + G E
Sbjct: 290 YAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIE 349

Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ------------- 221
                 A ++ +  R G+   A ++   MP+R S S W A++ G C+             
Sbjct: 350 PRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALL-GACKMHGKTELGRIAAE 408

Query: 222 ---------SGNAV-------------EALDILDEMRLEGVSMDP 244
                    SGN V             EA DI  EM+  G+  DP
Sbjct: 409 KLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDP 453


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/570 (38%), Positives = 339/570 (59%), Gaps = 47/570 (8%)

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIV 355
           +A ++F  M   +  S+N++I A  +SNDP  A   F  M +   ++P+  T  S+    
Sbjct: 63  YARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKAC 122

Query: 356 AQLNDCRNSRSVHGFIMRRGW------------------FMED----------------- 380
            +    R  R VHG  ++ G                    MED                 
Sbjct: 123 GRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGI 182

Query: 381 ----------VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
                     V++ N ++D Y ++G +  A  +F+ +P + V+SWN +I GYAQ+G   E
Sbjct: 183 RDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKE 242

Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLV 490
           A+EVF+ M+   E+ PN  T VS+LPA S +GAL  G  +H   ++N +  D  + + L+
Sbjct: 243 AVEVFREMQMA-EVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALI 301

Query: 491 DMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI 550
           DMY KCG I+ A+ +F  +P+ + V W+ II+   +HG+    L+ F  M   GV P  +
Sbjct: 302 DMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDV 361

Query: 551 TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQN 610
           T++ LL+ACSH+GLV+EG+ +F  M    G++P ++HYGCMVDL GRAG L  +   I N
Sbjct: 362 TYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILN 421

Query: 611 MPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGV 670
           MP++PD  IW ALLGAC++HGN+E+G   ++ L E+   + G YV +SNIYA++G WEGV
Sbjct: 422 MPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGV 481

Query: 671 DEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYV 730
            +VR + ++  ++K PG S IE++  +  F   + +HPK +KI+  L+ ++  +  +GY 
Sbjct: 482 AKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYR 541

Query: 731 PDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFI 790
           P+ + VL +++E++KE  L  HSE++AIAFG+IS+ P++P++I KNLR+C DCH+  K I
Sbjct: 542 PNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLI 601

Query: 791 SQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           S+I +R+IIVRD  RFHHF +G CSC DYW
Sbjct: 602 SKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 215/462 (46%), Gaps = 56/462 (12%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVY 111
           F  C  +  +K+LHA ++ + +I+   ++ +L+ F A  +  DL ++R  F  +   N +
Sbjct: 18  FFPCKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCF 77

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCS 168
           ++N++I          +A+  F +      + P+ +TFP V KAC     L +G+++H  
Sbjct: 78  SYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGL 137

Query: 169 VLKLGFEWDVFVAASLLHMY---------------------------------------- 188
            +K G + D FV ++++ MY                                        
Sbjct: 138 AVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWN 197

Query: 189 ------CRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
                  R G   VAR LFD+MP R   SWN MI+GY QSG+  EA+++  EM++  V  
Sbjct: 198 VMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPP 257

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
           + +T+ S+LP  +R   +  G  +HLY V++ +  +  + + LI+MYAK G +  AL+VF
Sbjct: 258 NYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVF 317

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           + + +R+VV+W++IIA              F  M++AG+ P  +T + L S  +      
Sbjct: 318 EGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVN 377

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
             R     ++R       +     +VD+  + G++  +  +   +P+K D + W  L+  
Sbjct: 378 EGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGA 437

Query: 422 YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSHVG 462
              +G       V    E   E+ P + G+YV++   Y+ +G
Sbjct: 438 CKMHGNVEMGKRV---AEHLMELAPHDSGSYVALSNIYASLG 476


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/645 (37%), Positives = 364/645 (56%), Gaps = 40/645 (6%)

Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
           DV+   +LL  Y + G+      +FD MP RDS S+N +I+ +  +G++ +AL +L  M+
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
            +G      +  + L  C++  ++  G  IH  IV   L  N FV N + +MYAK G + 
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207

Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
            A  +FD M++++VVSWN +I+ Y +  +P      F  MQ +G++PDL+T+ +      
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSN------ 261

Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
                                         V++ Y + G ++ A  +F  LP KD I W 
Sbjct: 262 ------------------------------VLNAYFRCGRVDDARNLFIKLPKKDEICWT 291

Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
           T+I GYAQNG   +A  +F  M   N + P+  T  S++ + + + +L  G  +H +V+ 
Sbjct: 292 TMIVGYAQNGREEDAWMLFGDMLRRN-VKPDSYTISSMVSSCAKLASLYHGQVVHGKVVV 350

Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
             +   + V++ LVDMY KCG   DA  +F  +P  + + WNA+I  +  +GQ  +AL  
Sbjct: 351 MGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTL 410

Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
           + +M  E  +PD+ITFV +L+AC ++ +V EGQ+YF  + E  GI P L HY CM+ L G
Sbjct: 411 YERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEH-GIAPTLDHYACMITLLG 469

Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVL 656
           R+G +  A + IQ MP  P+  IW  LL  C   G+++   +A+  LFE+D  N G Y++
Sbjct: 470 RSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIM 528

Query: 657 MSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDE 716
           +SN+YA  G+W+ V  VRSL +++  KK   +S +EV NKV  F + +  HP+  KIY E
Sbjct: 529 LSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGE 588

Query: 717 LRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPK-SPIQIFK 775
           L  L + ++ +GY PD + VL +V E+EK   ++ HSE+LA+AF +I  P   +PI+I K
Sbjct: 589 LNRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIK 648

Query: 776 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           N+RVC DCH + KF S    R II+RDSNRFHHF  G CSC D W
Sbjct: 649 NIRVCDDCHVFMKFASITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 248/512 (48%), Gaps = 75/512 (14%)

Query: 49  DFDDLFQSCTKLH---HVKRLHALLVVS-GKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           D+  L   C + +     KRL + + ++  + K  F   +L++ YA  G LS +++ FD+
Sbjct: 24  DYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDN 83

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTS--------------- 140
           ++ R+VY+WN+++S Y + G +      F Q          TL +               
Sbjct: 84  MTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVL 143

Query: 141 ------GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
                 G +P  Y+    L+AC  L+D   GK+IH  ++      + FV  ++  MY + 
Sbjct: 144 VRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKC 203

Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
           G  + AR LFD M  ++  SWN MISGY + GN  E + + +EM+L G+  D +TV+   
Sbjct: 204 GDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVS--- 260

Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 311
                                           N++N Y + G +  A  +F ++ ++D +
Sbjct: 261 --------------------------------NVLNAYFRCGRVDDARNLFIKLPKKDEI 288

Query: 312 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
            W ++I  Y Q+     A   F  M +  ++PD  T+ S+ S  A+L    + + VHG +
Sbjct: 289 CWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKV 348

Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
           +  G     +++ +A+VDMY K G+   A  +FE +P+++VI+WN +I GYAQNG   EA
Sbjct: 349 VVMG-IDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEA 407

Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
           + +++ M++ N   P+  T+V +L A  +   +++G K    + ++ +   +    C++ 
Sbjct: 408 LTLYERMQQEN-FKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMIT 466

Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVP-WNAIIS 522
           + G+ G +D A+ L   +P   +   W+ ++S
Sbjct: 467 LLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLS 498


>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/594 (39%), Positives = 346/594 (58%), Gaps = 25/594 (4%)

Query: 232 LDEMRLEGVSMDPIT-VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           L +   E  S+ P+  + S++P C     +     I  Y +K   + N  V    IN   
Sbjct: 13  LTKPNTETTSLLPLPHLISLIPKCTTLKELKQ---IQAYTIKTNYQNNTNVITKFINFCT 69

Query: 291 K---FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
                  M HA ++FDQ+ + ++V +N++   Y + NDP+     F            L 
Sbjct: 70  SNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRR---------CLR 120

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           LVS    +A+       + +H F ++ G   +++ +   +++MY   G I+++  VF+ +
Sbjct: 121 LVSKVKALAE------GKQLHCFAVKLG-VSDNMYVVPTLINMYTACGDIDASRRVFDKI 173

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
               V+++N +I   A+N  A+EA+ +F+ ++E   + P   T + +L + + +G+L  G
Sbjct: 174 DEPCVVAYNAIIMSLARNNRANEALALFRELQEIG-LKPTDVTMLVVLSSCALLGSLDLG 232

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
             +H  V K      V V T L+DMY KCG +DDA+++F  +P+  +  W+AII  +  H
Sbjct: 233 RWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATH 292

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G +A++   +M  E V+PD ITF+ +L ACSH+GLV EG  YFH M  E+GI P +KH
Sbjct: 293 GDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKH 352

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           YGCMVDL GRAG L  A+ FI  +P++P   +W  LL AC  HGN+E+G    +R+FE+D
Sbjct: 353 YGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELD 412

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
             + G YV+ SN+ A  GKW+ V+ +R    D+G  K PG SSIEVNN V  F+ G   H
Sbjct: 413 DSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVH 472

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVL-QDVEEDEKEHILTSHSERLAIAFGIISSP 766
                ++  L  L  ++KS GYVPD S V   D+E++EKE IL  HSE+LAI FG++++P
Sbjct: 473 STSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTP 532

Query: 767 PKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           P + I++ KNLRVCGDCHN  KFIS I  R+II+RD  RFHHFKDG CSCGDYW
Sbjct: 533 PGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 191/409 (46%), Gaps = 29/409 (7%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN---LGDLSFSRHTFDHISYRN 109
           L   CT L  +K++ A  + +         TK +NF  +      +  +   FD I+  N
Sbjct: 32  LIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPN 91

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSV 169
           +  +N+M   Y    RL++ +     F     LR        ++   + L +GK++HC  
Sbjct: 92  IVLFNTMARGY---ARLNDPLRMITHFR--RCLR--------LVSKVKALAEGKQLHCFA 138

Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
           +KLG   +++V  +L++MY   G  + +R++FD +      ++NA+I    ++  A EAL
Sbjct: 139 VKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEAL 198

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
            +  E++  G+    +T+  +L  CA   ++  G  +H Y+ K+G +  + V+  LI+MY
Sbjct: 199 ALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMY 258

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           AK G +  A+ VF  M +RD  +W++II AY    D   A      M++  +QPD +T +
Sbjct: 259 AKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFL 318

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----AVVDMYAKLGIINSACAVF 404
            +    +      N     GF    G   E  I+ +      +VD+  + G ++ A    
Sbjct: 319 GILYACSH-----NGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFI 373

Query: 405 EGLPVKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           + LP+K   I W TL++  + +G       V + + E ++   + G YV
Sbjct: 374 DELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDD--SHGGDYV 420


>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Vitis vinifera]
          Length = 590

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/567 (39%), Positives = 346/567 (61%), Gaps = 16/567 (2%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE--QS 323
           +H +++  GL F+ +  + ++ + +   +  HAL +F+ +    +  +N++I++    + 
Sbjct: 28  VHAHMITTGLIFHTYPLSRILLISSTI-VFTHALSIFNHIPNPTIFLYNTLISSLANIKP 86

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME---D 380
           +  I    +   +    ++P+  T  SL          R+ R++H  +++   F+E   D
Sbjct: 87  HTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLK---FLEPTCD 143

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA-----SEAIEVF 435
             +  A+++ YAK G + +   +F  +   D+ SWN++++ Y  N  A     S ++EV 
Sbjct: 144 PFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVL 203

Query: 436 QMMEECNE--INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMY 493
            +  E  +  I  N+ T V+++ A + +GAL QG   H  V+K+ L  + FV T L+DMY
Sbjct: 204 TLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMY 263

Query: 494 GKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 553
            KCG +D A  LF Q+P   ++ +NA+I    IHG G +AL+ F++M  EG+ PD +T V
Sbjct: 264 SKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLV 323

Query: 554 SLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPV 613
             + +CSH GLV EG   F  M+E +G++P L+HYGC+VDL GRAG L  A   + NMP+
Sbjct: 324 VTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPM 383

Query: 614 RPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEV 673
           +P+A IW +LLGA R+HGN+E+G V    L +++ E  G YVL+SN+YA++ +W+ V  V
Sbjct: 384 KPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRV 443

Query: 674 RSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDK 733
           R L +D G+ K PG S +EV   +  F  G++THP+ ++IY +L  ++ ++   G+ P  
Sbjct: 444 RKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRT 503

Query: 734 SFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQI 793
             VL D+EE+EKE  L+ HSERLAIAF +I+S   +PI+I KNLRVCGDCH  +K IS+I
Sbjct: 504 LEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKI 563

Query: 794 TEREIIVRDSNRFHHFKDGICSCGDYW 820
            EREIIVRD NRFHHFK+G CSC DYW
Sbjct: 564 YEREIIVRDRNRFHHFKEGACSCSDYW 590



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 189/396 (47%), Gaps = 29/396 (7%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
            L + C  L  +K++HA ++ +G I   +  ++++   + +   + +   F+HI    ++
Sbjct: 14  QLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTI-VFTHALSIFNHIPNPTIF 72

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLT-SGLRPDFYTFPPVLKACRN---LVDGKKIHC 167
            +N++IS        +      Y   LT + L+P+ +TFP + KAC +   L  G+ +H 
Sbjct: 73  LYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHT 132

Query: 168 SVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
            VLK L    D FV A+LL+ Y + G     R LF+ +   D  SWN+++S Y  +  A+
Sbjct: 133 HVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAI 192

Query: 227 --------EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
                   E L +  EM+   +  + +T+ +++  CA    +  G   H+Y++KH L+ N
Sbjct: 193 CEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLN 252

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
            FV   LI+MY+K G +  A ++FDQ+  RD + +N++I  +        A   F  M  
Sbjct: 253 HFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTL 312

Query: 339 AGIQPDLLTLV------SLTSIVAQLNDCRNS-RSVHGFIMRRGWFMEDVIIGNAVVDMY 391
            G+ PD +TLV      S   +V +  D   S + V+G   +   +         +VD+ 
Sbjct: 313 EGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHY-------GCLVDLL 365

Query: 392 AKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG 426
            + G +  A      +P+K + + W +L+     +G
Sbjct: 366 GRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHG 401


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 243/655 (37%), Positives = 368/655 (56%), Gaps = 14/655 (2%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           F +   +   K LH  ++  G++     ST  V  YA  G ++++R  F+ +   ++ ++
Sbjct: 25  FAATQSISKTKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSY 83

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVD---GKKIHCS 168
           N +I +YVR G   +A+  F +  ++ G++  PD YT+P V KA   L     G  +H  
Sbjct: 84  NIVIRMYVREGLYHDAISVFIRM-VSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142

Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
           +L+  F  D +V  +LL MY  FG   +AR +FD M  RD  SWN MISGY ++G   +A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202

Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
           L + D M  E V +D  T+ S+LPVC    ++  G  +H  + +  L   + V N L+NM
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262

Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
           Y K G M  A  VFD+M  RDV++W  +I  Y +  D   A      MQ  G++P+ +T+
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            SL S+        + + +HG+ +R+  +  D+II  +++ MYAK   ++    VF G  
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVY-SDIIIETSLISMYAKCKRVDLCFRVFSGAS 381

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
                 W+ +I G  QN L S+A+ +F+ M    ++ PN  T  S+LPAY+ +  LRQ +
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAALADLRQAM 440

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS----VPWNAIISCH 524
            IH  + K      +  AT LV +Y KCG ++ A  +F  +         V W A+IS +
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
           G+HG G  AL  F +M+  GV P+ ITF S L ACSHSGLV EG   F  M E +     
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
             HY C+VDL GRAG L  A+N I  +P  P +++WGALL AC  H N++LG +A+++LF
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV-NNKVD 698
           E++ EN G YVL++NIYA +G+W+ +++VRS+  + GL+K PG S+IE+ +N VD
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNSVD 675


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/717 (33%), Positives = 402/717 (56%), Gaps = 25/717 (3%)

Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC--RNLV-DGKKIHCSVLKLGFEWD 177
            RC    EA+    +     G + +   + P+L+ C  + LV D +KIH  ++K G   D
Sbjct: 49  ARCLDFREALSFIRE-----GTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKD 103

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
            F+   L+++Y + G    ARK+FD++P R+  SW  +++GY        A+ +  EM  
Sbjct: 104 AFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLE 163

Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
            G      T+ + L   +   +   G  IH Y +K+ +EF+  + N+L ++Y+K G +  
Sbjct: 164 AGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLEC 223

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
           A++ F ++ +++V+SW ++I+A+  + +  T   FF  M    ++P+  TL S  S+   
Sbjct: 224 AVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCV 283

Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
           +        +H   ++ G F  ++ I N+++ +Y K G I+ A  +F+ +    +++WN 
Sbjct: 284 MQSLDIGTQIHSLTIKLG-FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNA 342

Query: 418 LITG------YAQNGLA-----SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +I G      +A++ LA     +EA+ +F  +     + P+  T+ S+L   S + AL Q
Sbjct: 343 MIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSG-MKPDLFTFSSVLSVCSSLVALEQ 401

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
           G ++HA+ IK     DV V T LV+MY KCG I+ A   F ++   + + W ++I+ +  
Sbjct: 402 GEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQ 461

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
           +GQ  +AL  F  M   GVRP+ ITFV +L+ACSH+G+V E   YF MM+ E+ I P + 
Sbjct: 462 NGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMD 521

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV 646
           HY C++D+F R G L  A +FI+ M + P+  IW  L+  CR  G +ELG  A+++L  +
Sbjct: 522 HYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNL 581

Query: 647 DSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRT 706
             ++   Y L+ N+Y + GKW+ V  VR + ++  L +   WS I + +K+  F    R+
Sbjct: 582 KPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARS 641

Query: 707 HPKYEKIYDELRNLTAKMKSLGYVPDKSF-VLQDVEEDEKEHILTS---HSERLAIAFGI 762
           H +  ++Y+ L NL  K KS GY  ++S  V  + E+ ++E  LTS   HSE+LAIAFG+
Sbjct: 642 HAQSGEMYELLGNLHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGL 701

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
           +++    PI++ K++ +C DCHN+ + IS ++ REII+RDS R H F +G CSCGD+
Sbjct: 702 LNTSNAVPIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 273/536 (50%), Gaps = 28/536 (5%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            +++HA +V +G  K  F  T LVN YA  G +  +R  FD +  RNV +W ++++ YV 
Sbjct: 88  AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVH 147

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
             +   AV  F +  L +G  P  YT    L A  +L     GK+IH   +K   E+D  
Sbjct: 148 DSKPELAVQVFREM-LEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDAS 206

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           +  SL  +Y + G    A K F  +  ++  SW  +IS +  +G A   L    EM  E 
Sbjct: 207 IGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSEC 266

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
           V  +  T+ S L +C    ++  G  IH   +K G E NL + N+++ +Y K G +  A 
Sbjct: 267 VEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAK 326

Query: 300 RVFDQMMERDVVSWNSIIAAYEQ----SNDPITAH-------GFFTTMQQAGIQPDLLTL 348
           ++FD+M    +V+WN++IA + +    + D + AH         F  + ++G++PDL T 
Sbjct: 327 KLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
            S+ S+ + L        VH   ++ G F+ DV++G A+V+MY K G I  A   F  + 
Sbjct: 387 SSVLSVCSSLVALEQGEQVHAQTIKTG-FLSDVVVGTALVNMYNKCGSIERASKAFVEMS 445

Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
           ++ +ISW ++ITGYAQNG   +A+ +F+ M     + PN+ T+V +L A SH G + + +
Sbjct: 446 IRTLISWTSMITGYAQNGQPQQALLLFEDMRLAG-VRPNKITFVGVLSACSHAGMVDEAL 504

Query: 469 KIHARVIKNCLCFDVFV--ATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHG 525
             + +++KN       +    CL+DM+ + GR+D+A     ++    +   W+ +I+  G
Sbjct: 505 D-YFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIA--G 561

Query: 526 IHGQGDKALNFF--RQMLDEGVRP-DHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
              QG   L F+   Q+L+  ++P D  T+  LL     +G   E  R   MM+EE
Sbjct: 562 CRSQGKLELGFYAAEQLLN--LKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEE 615



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 7/173 (4%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   +++HA  + +G +  V   T LVN Y   G +  +   F  +S R + +W SMI+ 
Sbjct: 399 LEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITG 458

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWD 177
           Y + G+  +A+  F    L +G+RP+  TF  VL AC +  +VD    +  ++K  ++  
Sbjct: 459 YAQNGQPQQALLLFEDMRL-AGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKIT 517

Query: 178 VFV--AASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVE 227
             +   A L+ M+ R G  + A     +M +  +   W+ +I+G C+S   +E
Sbjct: 518 PVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAG-CRSQGKLE 569


>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/596 (36%), Positives = 349/596 (58%), Gaps = 41/596 (6%)

Query: 265 LIHLYIVKHGLEFNLFVSNNLINM---------YAKFGMMRHALRVFDQMMERDVVSWNS 315
           +IH ++++  L  ++FV++ L+ +         +    ++ +A  +F Q+   ++  +N 
Sbjct: 30  IIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFSQIQNPNLFVFNV 89

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           +I  +    +P  A GF+T M ++ I PD +T   L     ++         H  I+R G
Sbjct: 90  LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFG 149

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
            F  DV + N++V MYA  G+I +A  +F  +P +DV+SW +++ GY + G+  +A E+F
Sbjct: 150 -FQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMF 208

Query: 436 QMM-----------------EECNE-------------INPNQGTYVSILPAYSHVGALR 465
             M                   C E             +  N+   VS++ + +H+GAL 
Sbjct: 209 DEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALE 268

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
            G + H  V+K+ +  ++ + T LVDMY +CG I+ A+ +F ++P   S+ W++II    
Sbjct: 269 FGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLA 328

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
           +HG   KA+++F QM+  G  P  IT  ++L+ACSH GLV +G   +  M+ ++GI+P L
Sbjct: 329 VHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRL 388

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
           +HYGC+VD+ GRAG L  A NFI  MPV+P+A I GALLGAC+I+ N E+     + L E
Sbjct: 389 EHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIE 448

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG-N 704
           V  E+ GYYVL+SNIYA  G+WE ++ +R + +++ +KK PGWS IE++ K++ F  G +
Sbjct: 449 VKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFSMGDD 508

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
           + HP+  KI      +  K++ +GY  +      DV+E+EKE  +  HSE+LAIA+G++ 
Sbjct: 509 QKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEKETAIHMHSEKLAIAYGMMK 568

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +   + I+I KNLRVC DCH  TK IS++  RE IVRD NRFHHF++G+CSC DYW
Sbjct: 569 TKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNRFHHFRNGLCSCRDYW 624



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 191/402 (47%), Gaps = 46/402 (11%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHT---------FD 103
           L QSC+    +K +H  L+ +  I  VF +++L+     + D +F + T         F 
Sbjct: 18  LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFS 77

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---V 160
            I   N++ +N +I  +      S+A   FY   L S + PD  TFP ++KA   +   V
Sbjct: 78  QIQNPNLFVFNVLIRCFSTGAEPSKAFG-FYTQMLKSRIWPDNITFPFLIKASTEMECVV 136

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMY-------------------------------C 189
            G++ H  +++ GF+ DV+V  SL+HMY                               C
Sbjct: 137 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYC 196

Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
           + G+   AR++FD+MP R+  +W+ MI+GY ++    +A+D+ + M+ EGV  +   + S
Sbjct: 197 KCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVS 256

Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
           ++  CA    +  G   H Y+VK  +  NL +   L++MY + G +  A+RVF+++ ++D
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD 316

Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
            +SW+SII           A  +F+ M + G  P  +TL ++ S  +          ++ 
Sbjct: 317 SLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYE 376

Query: 370 FIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVK 410
             M+R + +E  +     +VDM  + G +  A      +PVK
Sbjct: 377 N-MKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVK 417


>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 345/590 (58%), Gaps = 10/590 (1%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF-- 292
           ++++ V+ +P     ++  C     ++    I  Y +K   E ++  +  LIN   +   
Sbjct: 22  LKIDTVNPNPPNPILLISKCNSERELMQ---IQAYAIKSHQE-DVSFNTKLINFCTESPT 77

Query: 293 -GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
              M +A  +FD M E D+V +NSI   Y +S +P+     F  + +  + PD  T  SL
Sbjct: 78  ESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSL 137

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
               A        R +H   M+ G   ++V +   +++MY +   +++A  VF+ +    
Sbjct: 138 LKACAVAKALEEGRQLHCLSMKLG-VDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPC 196

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           V+ +N +ITGYA+    +EA+ +F+ M+  N + PN+ T +S+L + + +G+L  G  IH
Sbjct: 197 VVCYNAMITGYARRNRPNEALSLFREMQGKN-LKPNEITLLSVLSSCALLGSLDLGKWIH 255

Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
               K+  C  V V T L+DM+ KCG +DDA+S+F  +    +  W+A+I  +  HGQ +
Sbjct: 256 EYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAE 315

Query: 532 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
            ++  F +M  E V+PD ITF+ LL ACSH+GLV EG+ YF  M  EFGI P +KHYG M
Sbjct: 316 NSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSM 375

Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
           VDL GRAGHL  A+ FI  +P+ P   +W  LL AC  H N+EL    S+R+ E+D  + 
Sbjct: 376 VDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHG 435

Query: 652 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
           G YV++SN+YA   KWE VD +R + +DR   K PG SSIEVNN V  F++G+       
Sbjct: 436 GDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATT 495

Query: 712 KIYDELRNLTAKMKSLGYVPDKSFVLQ-DVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
           K++  L  +  ++K  GYVPD S V+  D+ + EKE  L  HSE+LAIAFG++++PP + 
Sbjct: 496 KLHRALDEMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTT 555

Query: 771 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           I++ KNLRVC DCH+  K IS I  R++++RD  RFHHF+DG CSC D+W
Sbjct: 556 IRVVKNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 208/430 (48%), Gaps = 17/430 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRN 109
           L   C     + ++ A  + S +    F+ TKL+NF         +S++RH FD +S  +
Sbjct: 37  LISKCNSERELMQIQAYAIKSHQEDVSFN-TKLINFCTESPTESSMSYARHLFDAMSEPD 95

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +  +NS+   Y R     E  + F +  L   L PD YTFP +LKAC   + L +G+++H
Sbjct: 96  IVIFNSIARGYSRSTNPLEVFNLFVEI-LEDDLLPDNYTFPSLLKACAVAKALEEGRQLH 154

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
           C  +KLG + +V+V  +L++MY      + AR +FD +       +NAMI+GY +     
Sbjct: 155 CLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPN 214

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  EM+ + +  + IT+ S+L  CA   ++  G  IH Y  KHG    + V+  LI
Sbjct: 215 EALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALI 274

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +M+AK G +  A+ +F+ M  +D  +W+++I AY        +   F  M+   +QPD +
Sbjct: 275 DMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEI 334

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T + L +  +        R    +++     +  +    ++VD+  + G +  A    + 
Sbjct: 335 TFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDK 394

Query: 407 LPVKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH----- 460
           LP+    + W  L+   + +     A +V + + E ++   + G YV +   Y+      
Sbjct: 395 LPISPTPMLWRILLAACSSHNNLELAEKVSERILELDD--SHGGDYVILSNLYARNKKWE 452

Query: 461 -VGALRQGIK 469
            V +LR+ +K
Sbjct: 453 AVDSLRKVMK 462


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/782 (32%), Positives = 415/782 (53%), Gaps = 23/782 (2%)

Query: 52  DLFQSCTKLHHVKRLHALLV-VSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
           D F S   L   +  H  +   SG    V  +T ++  Y   G +S +R  FD +  RNV
Sbjct: 49  DAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNV 108

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHC 167
            +W++MI+ Y + G   +A++ F +     G++ +  TF  VL AC   R +  GK IH 
Sbjct: 109 VSWSAMIAAYAQRGHPGDALELFVRMD-HEGVKANAITFVSVLDACASMRAIALGKSIHE 167

Query: 168 SVLKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
            ++  G   D V +  ++++MY + G  ++AR++F+ M  +++ +WN MI+   +     
Sbjct: 168 RIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYK 227

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EA  +L EM L+G+  + IT+ S++  CA   +I+ G ++H  +   GLE +  V+N L+
Sbjct: 228 EAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALV 287

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           N+Y K G +R A    + +  RD +SW +++AAY +      A      M   G++ D  
Sbjct: 288 NLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSF 347

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T V+L      +        +H  +   G  + D ++  A+VDMY K G  ++A   F+ 
Sbjct: 348 TFVNLLESCVAIAALALGEEIHDRLAESGIEL-DPVLQTALVDMYGKCGNPDAARRAFDR 406

Query: 407 LP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
           +  V+DV  WN L+  Y       E + +F  M     + P+  T++SIL A + + AL 
Sbjct: 407 MSDVRDVTVWNALLAAYVLRDQGKETLGIFARM-SLQGVAPDAVTFLSILDACASLAALG 465

Query: 466 QGIKIHARVIKNCLCFDV-------FVATCLVDMYGKCGRIDDAMSLFYQVPRSSS---V 515
            G   H+R+++  L FD         + T +++MY KCG + DA + F +  R+ +   V
Sbjct: 466 LGRLTHSRMLERGL-FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVV 524

Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
            W+A+++ +   G  ++AL  F  M  EGV+PD ++FVS +  CSHSGLV E   +F  +
Sbjct: 525 AWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSL 584

Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
           + + GI P   H+ C+VDL  RAG +  A   ++  P+    S W  LL ACR +G++E 
Sbjct: 585 RHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLER 644

Query: 636 GAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNN 695
               + RL  + S +   Y L+++++    KW+ V   R    +RG    PG S IE+NN
Sbjct: 645 ARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINN 702

Query: 696 KVDIFYTG-NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
           +V  F+ G +R  P+ E+I+ EL  L  +++  GY  D    + D  E EK+ +L+ HSE
Sbjct: 703 RVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSE 762

Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
           ++A+ FG+IS+P  +P++I KN+ VC DCH   K IS++ +R I +RD   FH F  G C
Sbjct: 763 KVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSC 822

Query: 815 SC 816
           SC
Sbjct: 823 SC 824



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/533 (32%), Positives = 273/533 (51%), Gaps = 18/533 (3%)

Query: 108 RNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKK 164
           R+ ++WN  I+ Y R G  + A++ F    L  G+ PD  +   +L A  +L D   G+ 
Sbjct: 4   RSPFSWNLAIAEYARNGHHARALEIFRAMAL-EGVAPDRVSCIAILDAFASLGDLSQGEF 62

Query: 165 IHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            H +V +  G   DV VA ++L MY R G  + AR+ FD M VR+  SW+AMI+ Y Q G
Sbjct: 63  FHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRG 122

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVS 282
           +  +AL++   M  EGV  + IT  S+L  CA    I  G  IH  IV  G L  ++ + 
Sbjct: 123 HPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILG 182

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N ++NMY K G +  A  VF++M  ++ V+WN++IAA  + +    A      M   G++
Sbjct: 183 NTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLR 242

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
           P+ +TLVS+    A +      R VH  +   G    D  + NA+V++Y K G + +A  
Sbjct: 243 PNKITLVSVIDACAWMQSIVRGRIVHEIVAGEG-LESDNTVANALVNLYGKCGKLRAARH 301

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
             EG+  +D ISW TL+  YA++G    AI V + M+    +  +  T+V++L +   + 
Sbjct: 302 ALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDH-EGVKLDSFTFVNLLESCVAIA 360

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAII 521
           AL  G +IH R+ ++ +  D  + T LVDMYGKCG  D A   F ++     V  WNA++
Sbjct: 361 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALL 420

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + + +  QG + L  F +M  +GV PD +TF+S+L AC+    +  G R  H    E G+
Sbjct: 421 AAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLG-RLTHSRMLERGL 479

Query: 582 KPHLKHYGC------MVDLFGRAGHLGMAH-NFIQNMPVRP-DASIWGALLGA 626
                          +++++ + G L  A   F +    R  D   W A++ A
Sbjct: 480 FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA 532



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 234/457 (51%), Gaps = 5/457 (1%)

Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
           M  R   SWN  I+ Y ++G+   AL+I   M LEGV+ D ++  +IL   A   ++  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 264 LLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 322
              H  + +  GL  ++ V+  ++ MY + G + HA R FD M+ R+VVSW+++IAAY Q
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 323 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 382
              P  A   F  M   G++ + +T VS+    A +      +S+H  I+  G   +DVI
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 383 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
           +GN +V+MY K G ++ A  VFE +  K+ ++WNT+I   +++    EA  +   M + +
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEM-DLD 239

Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
            + PN+ T VS++ A + + ++ +G  +H  V    L  D  VA  LV++YGKCG++  A
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAA 299

Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
                 +     + W  +++ +  HG G +A+   ++M  EGV+ D  TFV+LL +C   
Sbjct: 300 RHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359

Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
             ++ G+   H    E GI+        +VD++G+ G+   A      M    D ++W A
Sbjct: 360 AALALGEE-IHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNA 418

Query: 623 LLGA--CRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
           LL A   R  G   LG  A   L  V  + V +  ++
Sbjct: 419 LLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSIL 455


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 378/743 (50%), Gaps = 76/743 (10%)

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTS 140
           A  G++  +R  F+ +  R   ++N++++ Y R      A+  F +           L S
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           GL     T P    A             +  + F   V    SLL  Y R GL   A +L
Sbjct: 88  GLSLRRQTLPDAAAA-------------LASIPFPPSVVSFTSLLRGYVRHGLLADAIRL 134

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  MP R+  S+  ++ G   +G   EA  + DEM                         
Sbjct: 135 FQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP------------------------ 170

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                          + ++     +++ Y + G +  A  +FD+M +R+VVSW ++I+ Y
Sbjct: 171 ---------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI--VAQLNDCRNSRSVHGFIMRRGWFM 378
            Q+ +   A   F  M +         LV       V    +  N+   H          
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH---------- 265

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             V   NA++  + + G++++A  VFE +  +D  +W+ +I  Y QN    EA+  F+ M
Sbjct: 266 -PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM 324

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                + PN  + +SIL   + +  L  G ++HA +++     DVF  + L+ MY KCG 
Sbjct: 325 L-WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +D A  +F+       V WN++I+ +  HG G++AL  F  M   G+ PD IT++  LTA
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS++G V EG+  F+ M     I+P  +HY CMVDL GR+G +  A + I+NMPV PDA 
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWGAL+GACR+H N E+   A+ +L E++  N G YVL+S+IY +VG+WE   ++R    
Sbjct: 504 IWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
            R L K+PG S IE + +V +F +G+   HP++  I   L  L   +   GY  D SFVL
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVL 623

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            D++E++K H L  HSER A+A+G++  P   PI++ KNLRVCGDCH+  K I++IT RE
Sbjct: 624 HDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSRE 683

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RD+NRFHHFKDG CSC DYW
Sbjct: 684 IILRDANRFHHFKDGFCSCRDYW 706



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 42/396 (10%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T +++ YA  G+++ +R  F+ +  RN  +W +M+  Y++ G + +A + F   
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
                  P+     PV              C+ + +GF               + G+ + 
Sbjct: 263 -------PEH----PVAA------------CNAMMVGF--------------GQRGMVDA 285

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A+ +F+ M  RD G+W+AMI  Y Q+   +EAL    EM   GV  +  +V SIL VCA 
Sbjct: 286 AKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G  +H  +++   + ++F  + LI MY K G +  A RVF     +D+V WNS+
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y Q      A G F  M+ AG+ PD +T +   +  +     +  R +   +     
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSS 465

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVF 435
                   + +VD+  + G++  A  + + +PV+ D + W  L+ G  +    +E  E  
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEF- 523

Query: 436 QMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
              ++  E+ P N G YV +   Y+ VG      K+
Sbjct: 524 -AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKM 558



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  E+ +  +     +  HV+    L     +      +  +V F    G +  ++  F+
Sbjct: 233 ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF-GQRGMVDAAKTVFE 291

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +  R+  TW++MI  Y +   L EA+  F +  L  G+RP++ +   +L  C  L    
Sbjct: 292 KMCERDDGTWSAMIKAYEQNEFLMEALSTFREM-LWRGVRPNYPSVISILTVCAALAVLD 350

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++H ++L+  F+ DVF  ++L+ MY + G  + A+++F     +D   WN+MI+GY 
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI-HLYIVKHGLEFNL 279
           Q G   +AL I  +MRL G+S D IT    L  C+ +  +  G  I +   V   +    
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              + ++++  + G++  A  +   M +E D V W +++ A
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 59/345 (17%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N  I   A+ G +  A   F+ M  R   S+N+++A Y ++  P  A G F  M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            DL +  +L S               G  +RR                      +  A A
Sbjct: 78  -DLASYNALIS---------------GLSLRR--------------------QTLPDAAA 101

Query: 403 VFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
               +P    V+S+ +L+ GY ++GL ++AI +FQ M E N +     +Y  +L      
Sbjct: 102 ALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV-----SYTVLLGGLLDA 156

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G + +  ++   +       DV   T ++  Y + GRI +A +LF ++P+ + V W A+I
Sbjct: 157 GRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMI 212

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +  +G+    +N  R++ +     + +++ ++L     +G V +    F+ M E    
Sbjct: 213 SGYAQNGE----VNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH--- 265

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            P       MV  FG+ G +  A    + M  R D + W A++ A
Sbjct: 266 -PVAACNAMMVG-FGQRGMVDAAKTVFEKMCERDDGT-WSAMIKA 307


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 260/786 (33%), Positives = 417/786 (53%), Gaps = 37/786 (4%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  +  +C+    L+  K +H   V++G ++T      +VN Y   G +  ++  F+ + 
Sbjct: 130 FSTVLTACSSAGALNEGKAIHDCAVLAG-METQVVGNAIVNLYGKCGRVHEAKAVFERLP 188

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GK 163
            RN+ +WN++I+   + G   +A+  F+   L   +RP+  TF  V+ AC NL+D   GK
Sbjct: 189 ERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGK 248

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
             H  +++ GF+  +FV  SL++MY + G  + AR +F+ M  R+  SW  MI  Y Q G
Sbjct: 249 STHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQG 308

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
               A D+   M  E    + +T  +++  C R +++     IH ++V  G + +  +  
Sbjct: 309 FIRAAFDLYKRMDCEP---NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQV 365

Query: 284 NLINMYAKFGMMRHALRVFDQMMER--DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            L+ MY K G +  A  +F+ + ER  + V+WN++I+   Q  +   A   F  M+  G+
Sbjct: 366 CLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGV 425

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           +P+ +T ++     + LND    R +H  I+     + +  + NAV++MY K G ++ A 
Sbjct: 426 RPNSVTYLASLEACSSLNDLTRGRQLHARILLEN--IHEANLSNAVINMYGKCGSLDEAM 483

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
             F  +P +DV+SWNT+I  YAQ+G   +A+E F+ M+       ++ TY+  + A   V
Sbjct: 484 DEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMD-LEGWTTDRATYLGAIDACGSV 542

Query: 462 GALRQGIKIHARVIKN--CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
            +L  G  IH+ V     CL  D  VAT LV MY +CG + DA S+F++    + V W+ 
Sbjct: 543 PSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSN 602

Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
           +I+    HG+ ++AL+ FR+M  +G +PD +TF +L+ ACS  G+V +G  YF  M E++
Sbjct: 603 LIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDY 662

Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
            I     H+G MVDL GRAG L  A    Q M   P A     LLGAC +HG++E G   
Sbjct: 663 SIPASEDHFGGMVDLLGRAGWLEEAE---QVMRKNPCALAHAVLLGACHVHGDVERGIRI 719

Query: 640 SDRLFEVDSENVGYY----VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSS-IEVN 694
           +    E+D +N   +     +++ +Y   G+WE    VR     R  ++ PG  S IEV 
Sbjct: 720 AQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVK 779

Query: 695 NKVDIFYTGNR--THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHIL-TS 751
           N+V  F   +     P+ +KI  EL+ L++     G +          +E+ + HIL   
Sbjct: 780 NRVHEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICK--------DENARAHILGCC 831

Query: 752 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFK- 810
           HSE++AI FGI+S+P    I+I KNLR C DCH + KF+S+  +REI VRD    H F+ 
Sbjct: 832 HSEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFQT 891

Query: 811 DGICSC 816
           +G CSC
Sbjct: 892 NGSCSC 897



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 318/619 (51%), Gaps = 36/619 (5%)

Query: 33  SLQISPDCLENESREID---FDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLV 86
           SLQ   + L+  S  +    +  L Q CT+       K +H  ++ SG     +    L+
Sbjct: 9   SLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLI 68

Query: 87  NFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF 146
             YA  G L  +   F+ +   NV++W ++I+ Y + G L E +  F +  L  G +PD 
Sbjct: 69  FMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQL-DGTKPDA 127

Query: 147 YTFPPVLKACRN---LVDGKKIH-CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
           + F  VL AC +   L +GK IH C+VL  G E  V V  +++++Y + G  + A+ +F+
Sbjct: 128 FVFSTVLTACSSAGALNEGKAIHDCAVLA-GMETQV-VGNAIVNLYGKCGRVHEAKAVFE 185

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNIL 261
            +P R+  SWNA+I+   Q+G+  +A+ +   M L+G V  +  T  S++  C+   ++ 
Sbjct: 186 RLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLP 245

Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
            G   H  I++ G +  LFV N+L+NMY K G +  A  VF++M  R+VVSW  +I AY 
Sbjct: 246 RGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYA 305

Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
           Q      A   +  M     +P+ +T +++     +  D   +  +H  ++  G F  D 
Sbjct: 306 QQGFIRAAFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASG-FDSDA 361

Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVFQMME 439
           ++   +V MY K G ++SA ++FE L  +  + ++WN +I+G AQ+G + +A+E F  M 
Sbjct: 362 VLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKM- 420

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
           E   + PN  TY++ L A S +  L +G ++HAR++   +  +  ++  +++MYGKCG +
Sbjct: 421 ELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGSL 479

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
           D+AM  F ++P    V WN +I+ +  HG G +AL FF+QM  EG   D  T++  + AC
Sbjct: 480 DEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDAC 539

Query: 560 SHSGLVSEGQRYFHM-------MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
                ++ G+    +       ++++ G+   L      V ++ R G L  A +      
Sbjct: 540 GSVPSLALGKTIHSIVATAAPCLEQDPGVATAL------VTMYARCGSLHDAKSVFWRSH 593

Query: 613 VRPDASIWGALLGACRIHG 631
            R +   W  L+ AC  HG
Sbjct: 594 SR-NLVTWSNLIAACAQHG 611



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 264/500 (52%), Gaps = 17/500 (3%)

Query: 139 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
           +  L+P  Y    +L+ C   ++   GK +H  +L  G   + ++   L+ MY + G   
Sbjct: 21  SESLQPARYA--SLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLE 78

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            A ++F+ +P  +  SW A+I+ Y + G+  E L +  +M+L+G   D    +++L  C+
Sbjct: 79  DALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACS 138

Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
            +  +  G  IH   V  G+E  + V N ++N+Y K G +  A  VF+++ ER++VSWN+
Sbjct: 139 SAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNA 197

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           +IAA  Q+     A   F  M   G ++P+  T VS+    + L D    +S H  I+R 
Sbjct: 198 LIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRT 257

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
           G F   + +GN++V+MY K G ++ A  VFE +  ++V+SW  +I  YAQ G    A ++
Sbjct: 258 G-FDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDL 316

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
           ++ M    +  PN  T+++++ +      L +  +IHA ++ +    D  +  CLV MYG
Sbjct: 317 YKRM----DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYG 372

Query: 495 KCGRIDDAMSLFYQVPRSS--SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           KCG +D A S+F  +   S  +V WNA+IS    HG+  +AL  F +M  EGVRP+ +T+
Sbjct: 373 KCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTY 432

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           ++ L ACS    ++ G++    +  E   + +L +   +++++G+ G L  A +    MP
Sbjct: 433 LASLEACSSLNDLTRGRQLHARILLENIHEANLSN--AVINMYGKCGSLDEAMDEFAKMP 490

Query: 613 VRPDASIWGALLGACRIHGN 632
            R D   W  ++     HG+
Sbjct: 491 ER-DVVSWNTMIATYAQHGS 509


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/737 (33%), Positives = 395/737 (53%), Gaps = 57/737 (7%)

Query: 86  VNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
           +   + +G +  +R  FD    +++ +WNSM++ Y             +   +    R  
Sbjct: 24  ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGY-------------FANLMPRDARKL 70

Query: 146 FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
           F   P      RN++               W+  V+      Y + G  + ARK+FD MP
Sbjct: 71  FDEMPD-----RNIIS--------------WNGLVSG-----YMKNGEIDEARKVFDLMP 106

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
            R+  SW A++ GY  +G     +D+ + +  +    + ++   +L    +   I     
Sbjct: 107 ERNVVSWTALVKGYVHNGK----VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACK 162

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           ++  I       +     ++I+   K G +  A  +FD+M ER V++W +++  Y Q+N 
Sbjct: 163 LYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   F  M +        T VS TS++  +   +N R      +     ++ VI  N
Sbjct: 219 VDDARKIFDVMPEK-------TEVSWTSML--MGYVQNGRIEDAEELFEVMPVKPVIACN 269

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
           A++    + G I  A  VF+ +  ++  SW T+I  + +NG   EA+++F +M++   + 
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK-QGVR 328

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
           P   T +SIL   + + +L  G ++HA++++     DV+VA+ L+ MY KCG +  +  +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM-LDEGVRPDHITFVSLLTACSHSGL 564
           F + P    + WN+IIS +  HG G++AL  F +M L    +P+ +TFV+ L+ACS++G+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG + +  M+  FG+KP   HY CMVD+ GRAG    A   I +M V PDA++WG+LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
           GACR H  +++    + +L E++ EN G Y+L+SN+YA+ G+W  V E+R L + R ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568

Query: 685 TPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEED 743
           +PG S  EV NKV  F  G   +HP+ E I   L  L   ++  GY PD S+ L DV+E+
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEE 628

Query: 744 EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
           EK + L  HSERLA+A+ ++      PI++ KNLRVC DCH   K IS++ EREII+RD+
Sbjct: 629 EKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDA 688

Query: 804 NRFHHFKDGICSCGDYW 820
           NRFHHF++G CSC DYW
Sbjct: 689 NRFHHFRNGECSCKDYW 705



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 227/462 (49%), Gaps = 23/462 (4%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + + S   LV+ Y   G++  +R  FD +  RNV +W +++  YV  G++  A   F++ 
Sbjct: 77  RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGK-KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
                  P+       +     L DG+    C + ++  + D     S++H  C+ G  +
Sbjct: 137 -------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189

Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
            AR++FD+M  R   +W  M++GY Q+    +A  I D M         ++  S+L    
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYV 245

Query: 256 RSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
           ++  I     L  +  VK      +   N +I+   + G +  A RVFD M ER+  SW 
Sbjct: 246 QNGRIEDAEELFEVMPVK-----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300

Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 374
           ++I  +E++   + A   F  MQ+ G++P   TL+S+ S+ A L    + + VH  ++ R
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV-R 359

Query: 375 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
             F  DV + + ++ MY K G +  +  +F+  P KD+I WN++I+GYA +GL  EA++V
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419

Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDM 492
           F  M       PN+ T+V+ L A S+ G + +G+KI+   +++        A   C+VDM
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES-MESVFGVKPITAHYACMVDM 478

Query: 493 YGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
            G+ GR ++AM +   +     +  W +++     H Q D A
Sbjct: 479 LGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA 520



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
           +K V +   +++     G+++ +R  FD +  RN  +W ++I ++ R G   EA+D F  
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI- 320

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
                G+RP F T   +L  C +L     GK++H  +++  F+ DV+VA+ L+ MY + G
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASIL 251
               ++ +FD  P +D   WN++ISGY   G   EAL +  EM L G +  + +T  + L
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440

Query: 252 PVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERD 309
             C+ +  +  GL I+  +    G++        +++M  + G    A+ + D M +E D
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500

Query: 310 VVSWNSIIAA 319
              W S++ A
Sbjct: 501 AAVWGSLLGA 510



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 145/350 (41%), Gaps = 62/350 (17%)

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            +N  I   ++ G +  A ++FD    + + SWNS++A Y  +  P  A   F  M    
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
             PD                                   ++I  N +V  Y K G I+ A
Sbjct: 75  --PD----------------------------------RNIISWNGLVSGYMKNGEIDEA 98

Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
             VF+ +P ++V+SW  L+ GY  NG    A  +F  M E N++     ++  +L  +  
Sbjct: 99  RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV-----SWTVMLIGFLQ 153

Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
            G +    K++  +       D    T ++    K GR+D+A  +F ++   S + W  +
Sbjct: 154 DGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209

Query: 521 ISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFG 580
           ++ +G + + D A   F  M ++      +++ S+L     +G + + +  F +M     
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMP---- 261

Query: 581 IKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
           +KP +     M+   G+ G +  A     +M  R DAS W  ++   +IH
Sbjct: 262 VKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDAS-WQTVI---KIH 306



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 23/263 (8%)

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            N  +   +++G I+ A  +F+    K + SWN+++ GY  N +  +A ++F  M + N 
Sbjct: 20  ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           I+ N      ++  Y   G + +  K+   + +     +V   T LV  Y   G++D A 
Sbjct: 80  ISWN-----GLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAE 130

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           SLF+++P  + V W  ++      G+ D A   +  + D+    D+I   S++      G
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEG 186

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            V E +  F  M E   I      +  MV  +G+   +  A      MP + + S W ++
Sbjct: 187 RVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSM 240

Query: 624 LGACRIHGNMELGAVASDRLFEV 646
           L     +G +E     ++ LFEV
Sbjct: 241 LMGYVQNGRIE----DAEELFEV 259



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 6/172 (3%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   LHH K++HA LV       V+ ++ L+  Y   G+L  S+  FD    +++  WNS
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 172
           +IS Y   G   EA+  F +  L+   +P+  TF   L AC     + +G KI+ S+  +
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462

Query: 173 -GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQS 222
            G +      A ++ M  R G  N A ++ D M V  D+  W +++ G C++
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL-GACRT 513


>gi|302764988|ref|XP_002965915.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
 gi|300166729|gb|EFJ33335.1| hypothetical protein SELMODRAFT_167728 [Selaginella moellendorffii]
          Length = 912

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 259/773 (33%), Positives = 407/773 (52%), Gaps = 62/773 (8%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           V S   L+  Y++   +  ++  FD    R+  +WN+M++ Y + G L  A + F +   
Sbjct: 171 VISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTP- 229

Query: 139 TSGLRPDFYTFPPVLKAC------------------RNLVDGK---KIHCSVLKLGF--- 174
               + D  +   ++KAC                  RN V      +I+    K+G    
Sbjct: 230 ----QQDIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAEN 285

Query: 175 ------EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG-SWNAMISGYCQSGNAVE 227
                 + D  +  S+L  Y R GL   AR++FD    RD   SWNA++S Y Q+G+   
Sbjct: 286 LSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHL 345

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           A    + M       D +   +++ V  ++  +    +++  I     E +L     LI 
Sbjct: 346 ARSTFERMPRH----DVVAWTALIAVSGQNGQLEEAEVLYDLIP----ERDLVAWTALIQ 397

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
            Y   G +  + RV+  M ER+ VS  ++I AY Q+ + + A     T+      PD  T
Sbjct: 398 AYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLPD----PDQST 453

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
             S+    AQ    +++R +   I        DVI  NA+++ Y+   +++ A A+F+ +
Sbjct: 454 RTSMIVAYAQNGYIKDAREMFDSIKN-----PDVIACNAMMEAYSSAQMLDHAKAMFDSI 508

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             K ++SWNT++  YAQ G   EA  +F  +   N ++ N      ++ AY+H   L + 
Sbjct: 509 KQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHN-----VMIVAYAHNMDLAEA 563

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            +I   + +     D    T +V M  + GR+ +A  LF ++P  + V WN++I+     
Sbjct: 564 RRIFYSMDEK----DTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASC 619

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G  A+ +   M +EG +PDHITF+ +L ACSH GLV EG  +F  MQ + G+ P  +H
Sbjct: 620 GHGMAAVRYLYVMRNEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREH 679

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y  MVD+ GRAG LG A   ++ MP  PD   WG+LLG+C+ H +++LG  A++ L + D
Sbjct: 680 YCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFD 739

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
            ++ G YVL++N+Y++VG+      VR+  + RG+KK PG S I V+  +  F  G  +H
Sbjct: 740 DQSSGPYVLLANMYSSVGRVADALAVRNRMKARGVKKQPGVSLIRVDGVLHRFVAGEASH 799

Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
           P++++I  EL  L   MK  GY PD   VL  + ++EKE +L+ HSE+LAIAF  I+  P
Sbjct: 800 PRHQEILSELSRLQELMKKAGYQPDTKAVLHSILDEEKEVLLSYHSEKLAIAFASIACEP 859

Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            +PI+I KNLRVC DCH  TKF+S++ +REIIVRD  RFH+F++G CSCGDYW
Sbjct: 860 GTPIRIMKNLRVCSDCHTATKFLSKLLQREIIVRDGYRFHNFENGTCSCGDYW 912



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 136/579 (23%), Positives = 257/579 (44%), Gaps = 74/579 (12%)

Query: 79  VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL 138
           VFS   L+  Y+  GDL  ++  FD I   NV +WNS+I+ + + G +S A + F +   
Sbjct: 78  VFSRCILMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPR 137

Query: 139 TSGLRPDF----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
            S    +     Y     L +   + D    H  +      W+  +       Y    + 
Sbjct: 138 WSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVI-----SWNALITG-----YSDNRMI 187

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             A+ +FD  P RD  SWNAM++ Y QSG+   A ++ D    +    D ++   ++  C
Sbjct: 188 PEAKGVFDRAPGRDKISWNAMLTAYAQSGDLDSAKEVFDRTPQQ----DIVSCTLMIKAC 243

Query: 255 ARSD---------------NILS-GLLIHLYI--VKHGLEFNL---------FVSNNLIN 287
           A  +               N +S   +I +YI   K G   NL          +  ++++
Sbjct: 244 AVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLS 303

Query: 288 MYAKFGMMRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            Y++ G++  A R+FD+   R D VSWN++++AY Q+     A   F  M +     D++
Sbjct: 304 AYSRHGLVEEARRIFDRAARRDDEVSWNALLSAYAQAGHLHLARSTFERMPRH----DVV 359

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
              +L ++  Q      +  ++  I  R     D++   A++  Y   G +  +  V+  
Sbjct: 360 AWTALIAVSGQNGQLEEAEVLYDLIPER-----DLVAWTALIQAYGVNGKLTESKRVYAL 414

Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
           +P ++ +S   +I  Y+QNG   E ++  +M++   +  P+Q T  S++ AY+  G ++ 
Sbjct: 415 MPERNRVSHTAMIIAYSQNG---EVVQARKMLDTLPD--PDQSTRTSMIVAYAQNGYIKD 469

Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
             ++    IKN    DV     +++ Y     +D A ++F  + + + V WN +++ +  
Sbjct: 470 AREMFDS-IKNP---DVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQ 525

Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
            G  D+A + F  +  + V    ++   ++ A +H+  ++E +R F+ M E+  +     
Sbjct: 526 AGNLDEAKSIFDSIPHKNV----VSHNVMIVAYAHNMDLAEARRIFYSMDEKDTVT---- 577

Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
            +  MV +  + G L  A      MP R   S W +L+ 
Sbjct: 578 -WTAMVAMVAQHGRLAEAQELFAKMPYRNVVS-WNSLIA 614



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 47/412 (11%)

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
            +A+ +  C  + ++  G  IH  I       NLF+ N +I MY K   +  A  VF+++
Sbjct: 14  ALATAIRSCGIAKDLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFNEL 73

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            E +V S   ++ AY ++ D  +A   F  +    +       VS  S++A         
Sbjct: 74  PEPNVFSRCILMQAYSENGDLGSAKAIFDQIPSHNV-------VSWNSLIAGF------- 119

Query: 366 SVHGFIMRRGWFMEDVIIG----------NAVVDMYAKLGIINSACAVFEGLPVKDVISW 415
           S HGF+        D I            N+++  YA+ G + SA A+F+  P  +VISW
Sbjct: 120 SQHGFMSN-----ADEIFARMPRWSSSSWNSMITGYAQSGDLASATAMFDRTPEHNVISW 174

Query: 416 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 475
           N LITGY+ N +  EA  VF      ++I+ N     ++L AY+  G L    ++  R  
Sbjct: 175 NALITGYSDNRMIPEAKGVFDRAPGRDKISWN-----AMLTAYAQSGDLDSAKEVFDRTP 229

Query: 476 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 535
           +     D+   T ++        +  A+ +F  +P  ++V ++ +I  +   G+  +A N
Sbjct: 230 QQ----DIVSCTLMIKACAVQEILGHAVEIFAAMPDRNAVSYSFMIQIYIDQGKIGEAEN 285

Query: 536 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 595
             R+M  +    D   + S+L+A S  GLV E +R F    +    +     +  ++  +
Sbjct: 286 LSRRMPQQ----DPTLWTSMLSAYSRHGLVEEARRIF----DRAARRDDEVSWNALLSAY 337

Query: 596 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
            +AGHL +A +  + MP R D   W AL+     +G +E   V  D + E D
Sbjct: 338 AQAGHLHLARSTFERMP-RHDVVAWTALIAVSGQNGQLEEAEVLYDLIPERD 388



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 120/576 (20%), Positives = 232/576 (40%), Gaps = 107/576 (18%)

Query: 94  DLSFSRHTFDHIS---YR-NVYTWNSMISVYVRCGRLSEAVDCFYQF----TLTSGLRPD 145
           DL+  R   + I+   +R N++  N +I +Y +C R+ +A   F +       +  +   
Sbjct: 27  DLAQGRKIHNQIADGEHRGNLFLQNLIIQMYGKCSRIDDAQAVFNELPEPNVFSRCILMQ 86

Query: 146 FYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 205
            Y+    L + + + D    H  V      W+  +A      + + G  + A ++F  MP
Sbjct: 87  AYSENGDLGSAKAIFDQIPSHNVV-----SWNSLIAG-----FSQHGFMSNADEIFARMP 136

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
              S SWN+MI+GY QSG+   A  + D                                
Sbjct: 137 RWSSSSWNSMITGYAQSGDLASATAMFDRTP----------------------------- 167

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
                     E N+   N LI  Y+   M+  A  VFD+   RD +SWN+++ AY QS D
Sbjct: 168 ----------EHNVISWNALITGYSDNRMIPEAKGVFDRAPGRDKISWNAMLTAYAQSGD 217

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
             +A   F        Q D+++   +    A      ++  +   +  R     + +  +
Sbjct: 218 LDSAKEVFDRTP----QQDIVSCTLMIKACAVQEILGHAVEIFAAMPDR-----NAVSYS 268

Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
            ++ +Y   G I  A  +   +P +D   W ++++ Y+++GL  EA  +F      ++  
Sbjct: 269 FMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDRAARRDD-- 326

Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
             + ++ ++L AY+  G L        R+ ++    DV   T L+ + G+ G++++A  L
Sbjct: 327 --EVSWNALLSAYAQAGHLHLARSTFERMPRH----DVVAWTALIAVSGQNGQLEEAEVL 380

Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFF---------------------------R 538
           +  +P    V W A+I  +G++G+  ++   +                           R
Sbjct: 381 YDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQAR 440

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +MLD    PD  T  S++ A + +G + + +  F  ++      P +     M++ +  A
Sbjct: 441 KMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIK-----NPDVIACNAMMEAYSSA 495

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
             L  A     ++  +   S W  ++ A    GN++
Sbjct: 496 QMLDHAKAMFDSIKQKTLVS-WNTMVAAYAQAGNLD 530



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 119/525 (22%), Positives = 217/525 (41%), Gaps = 57/525 (10%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +   S + ++  Y + G +  + +    +  ++   W SM+S Y R G + EA   F + 
Sbjct: 262 RNAVSYSFMIQIYIDQGKIGEAENLSRRMPQQDPTLWTSMLSAYSRHGLVEEARRIFDR- 320

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW----DVFVAASLLHMYCRFG 192
              +  R D  ++  +L A       +  H  + +  FE     DV    +L+ +  + G
Sbjct: 321 ---AARRDDEVSWNALLSAY-----AQAGHLHLARSTFERMPRHDVVAWTALIAVSGQNG 372

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM----RLEGVSM------ 242
               A  L+D +P RD  +W A+I  Y  +G   E+  +   M    R+   +M      
Sbjct: 373 QLEEAEVLYDLIPERDLVAWTALIQAYGVNGKLTESKRVYALMPERNRVSHTAMIIAYSQ 432

Query: 243 --DPITVASILPVCARSDNILSGLLIHLYI----VKHGLEF-------NLFVSNNLINMY 289
             + +    +L      D      +I  Y     +K   E        ++   N ++  Y
Sbjct: 433 NGEVVQARKMLDTLPDPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNPDVIACNAMMEAY 492

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +   M+ HA  +FD + ++ +VSWN+++AAY Q+ +   A   F ++    +    + +V
Sbjct: 493 SSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVVSHNVMIV 552

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           +     A   D   +R +   +  +     D +   A+V M A+ G +  A  +F  +P 
Sbjct: 553 AY----AHNMDLAEARRIFYSMDEK-----DTVTWTAMVAMVAQHGRLAEAQELFAKMPY 603

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQGI 468
           ++V+SWN+LI G A  G    A+    +M   NE   P+  T++ IL A SHVG + +G 
Sbjct: 604 RNVVSWNSLIAGMASCGHGMAAVRYLYVMR--NEGAKPDHITFMGILIACSHVGLVEEGW 661

Query: 469 KIHARVIKNCLCFDVFVATC-LVDMYGKCGRIDDAMSLFYQVPRSSSV-PWNAIISCHGI 526
                +  +          C +VD+ G+ G++  A  L   +P    V  W +++     
Sbjct: 662 THFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKT 721

Query: 527 HGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
           H     G +A     Q  D+   P    +V L    S  G V++ 
Sbjct: 722 HSDVKLGTRAAESLLQFDDQSSGP----YVLLANMYSSVGRVADA 762



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 21/279 (7%)

Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
           ++  Y++ G + SA A+F+ +P  +V+SWN+LI G++Q+G  S A E+F  M   +    
Sbjct: 84  LMQAYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSS--- 140

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
              ++ S++  Y+  G L     +  R  ++    +V     L+  Y     I +A  +F
Sbjct: 141 --SSWNSMITGYAQSGDLASATAMFDRTPEH----NVISWNALITGYSDNRMIPEAKGVF 194

Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
            + P    + WNA+++ +   G  D A    +++ D   + D ++   ++ AC+   ++ 
Sbjct: 195 DRAPGRDKISWNAMLTAYAQSGDLDSA----KEVFDRTPQQDIVSCTLMIKACAVQEILG 250

Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
                F  M +   +      Y  M+ ++   G +G A N  + MP + D ++W ++L A
Sbjct: 251 HAVEIFAAMPDRNAVS-----YSFMIQIYIDQGKIGEAENLSRRMP-QQDPTLWTSMLSA 304

Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
              HG +E      DR    D E V +  L+S  YA  G
Sbjct: 305 YSRHGLVEEARRIFDRAARRDDE-VSWNALLS-AYAQAG 341



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 112/277 (40%), Gaps = 45/277 (16%)

Query: 52  DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
           + + S   L H K     +  S K KT+ S   +V  YA  G+L  ++  FD I ++NV 
Sbjct: 490 EAYSSAQMLDHAK----AMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNVV 545

Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLK 171
           + N MI  Y     L+EA   FY                                     
Sbjct: 546 SHNVMIVAYAHNMDLAEARRIFYSMD---------------------------------- 571

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
              E D     +++ M  + G    A++LF  MP R+  SWN++I+G    G+ + A+  
Sbjct: 572 ---EKDTVTWTAMVAMVAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRY 628

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK--HGLEFNLFVSNNLINMY 289
           L  MR EG   D IT   IL  C+    +  G   H   ++  HGL         ++++ 
Sbjct: 629 LYVMRNEGAKPDHITFMGILIACSHVGLVEEG-WTHFTSMQGDHGLIPWREHYCRMVDVL 687

Query: 290 AKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND 325
            + G +  A  + + M    DV +W S++ + +  +D
Sbjct: 688 GRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSD 724


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/515 (42%), Positives = 312/515 (60%), Gaps = 31/515 (6%)

Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW----FMEDVIIG------- 384
           M+   + PD  T   +     +L+D  N +++HG   + G+    F++++I+        
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 385 -------------------NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
                              N V+   AK G I+ A   F  +P K+V SW ++I+G+ Q 
Sbjct: 61  MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G  +EAI++F  +E+   + PN+ T VS+L A + +G L  G  +H    K+    +V V
Sbjct: 121 GKPNEAIDLFMKLED-EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHV 179

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              L+DMY KCG +++A  +FY++   + V W+A+I+   +HGQ ++AL  F +M+  GV
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           +P+ +TF+ LL ACSH GL+ EG+R+F  M  ++G+ P ++HYGC+VDLF RAG L  AH
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
            FI +MP++P+  +WGALLG C++H N++L   A   L E+D  N GYYV++SNIYA   
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAE 359

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
           +WE    VR L +DRG+KKT GWSSI VN  V  F  G++THP+ E I      L  KMK
Sbjct: 360 RWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMK 419

Query: 726 SLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHN 785
             GY P  S VL D+EE EKE  L  HSE+LA+ FG++++P  +PI+I KNLRVC DCH 
Sbjct: 420 RRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHA 479

Query: 786 WTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
             K IS I  REIIVRD NRFH F+DG CSC D+W
Sbjct: 480 ALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 168/356 (47%), Gaps = 45/356 (12%)

Query: 144 PDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD +T   VLKAC  L   V+GK IH    KLGF  ++F+   +L++Y   G    A  L
Sbjct: 8   PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67

Query: 201 FDDMPVRDSGSWN-------------------------------AMISGYCQSGNAVEAL 229
           F+ MP RD+ +WN                               +MISG+ Q G   EA+
Sbjct: 68  FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           D+  ++  E V  + +TV S+L  CA   ++  G ++H Y  K G + N+ V N LI+MY
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
            K G + +A RVF +M ER VVSW+++IA          A   F+ M + G++P+ +T +
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFI 247

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            L    + +      R     +      +  +     VVD++++ G++  A      +P+
Sbjct: 248 GLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPI 307

Query: 410 K-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAYSH 460
           K + + W  L+ G   +    LA EAI      +  +E++P N G YV I   Y+ 
Sbjct: 308 KPNGVVWGALLGGCKVHKNIDLAEEAI------KHLSELDPLNDGYYVVISNIYAE 357



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 163/332 (49%), Gaps = 35/332 (10%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           MRL  V  D  T + +L  C +  ++++G  IH    K G   NLF+ N ++N+Y   G 
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM------------------ 336
           M  A+ +F++M +RD V+WN +IA   +  D   A+GFF  M                  
Sbjct: 61  MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120

Query: 337 -------------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                        +   ++P+ +T+VS+ +  A L D    R VH +  + G F  +V +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG-FKRNVHV 179

Query: 384 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            N ++DMY K G + +A  VF  +  + V+SW+ +I G A +G A EA+ +F  M +   
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG- 238

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDA 502
           + PN  T++ +L A SH+G + +G +  A +  +  +   +    C+VD++ + G +++A
Sbjct: 239 VKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEA 298

Query: 503 MSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
                 +P + + V W A++    +H   D A
Sbjct: 299 HEFILSMPIKPNGVVWGALLGGCKVHKNIDLA 330



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 4/169 (2%)

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTF 149
           A  GD+  +   F  +  +NV +W SMIS +V+CG+ +EA+D F +      +RP+  T 
Sbjct: 87  AKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLE-DEAVRPNEVTV 145

Query: 150 PPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV 206
             VL AC +L D   G+ +H    K GF+ +V V  +L+ MY + G    AR++F +M  
Sbjct: 146 VSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEE 205

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
           R   SW+AMI+G    G A EAL +  EM   GV  + +T   +L  C+
Sbjct: 206 RTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACS 254



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 32/246 (13%)

Query: 90  ANLGDLSFSR--HTFDHIS--YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
           A+LGDL   R  H +   S   RNV+  N++I +YV+CG L  A   FY+    +     
Sbjct: 153 ADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERT----- 207

Query: 146 FYTFPPVLKACRNLVDGKKIHC---SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 202
             ++  ++         ++  C    ++KLG + +      LLH     GL +  R+ F 
Sbjct: 208 VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFA 267

Query: 203 DMPVRDSG------SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
            M   D G       +  ++  + ++G   EA + +  M ++    + +   ++L  C  
Sbjct: 268 SMTA-DYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKP---NGVVWGALLGGCKV 323

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLI---NMYAKFGMMRHALRVFDQMMERDV--- 310
             NI     +    +KH  E +       +   N+YA+      A RV   M +R V   
Sbjct: 324 HKNI----DLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKT 379

Query: 311 VSWNSI 316
             W+SI
Sbjct: 380 SGWSSI 385


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/743 (33%), Positives = 378/743 (50%), Gaps = 76/743 (10%)

Query: 90  ANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTS 140
           A  G++  +R  F+ +  R   ++N++++ Y R      A+  F +           L S
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           GL     T P    A             +  + F   V    SLL  Y R GL   A +L
Sbjct: 88  GLSLRRQTLPDAAAA-------------LASIPFPPSVVSFTSLLRGYVRHGLLADAIRL 134

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           F  MP R+  S+  ++ G   +G   EA  + DEM                         
Sbjct: 135 FQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP------------------------ 170

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                          + ++     +++ Y + G +  A  +FD+M +R+VVSW ++I+ Y
Sbjct: 171 ---------------DRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGY 215

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI--VAQLNDCRNSRSVHGFIMRRGWFM 378
            Q+ +   A   F  M +         LV       V    +  N+   H          
Sbjct: 216 AQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH---------- 265

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
             V   NA++  + + G++++A  VFE +  +D  +W+ +I  Y QN    EA+  F+ M
Sbjct: 266 -PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREM 324

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
                + PN  + +SIL   + +  L  G ++HA +++     DVF  + L+ MY KCG 
Sbjct: 325 L-WRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383

Query: 499 IDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTA 558
           +D A  +F+       V WN++I+ +  HG G++AL  F  M   G+ PD IT++  LTA
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS++G V EG+  F+ M     I+P  +HY CMVDL GR+G +  A + I+NMPV PDA 
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503

Query: 619 IWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLAR 678
           IWGAL+GACR+H N E+   A+ +L E++  N G YVL+S+IY +VG+WE   ++R    
Sbjct: 504 IWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563

Query: 679 DRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 737
            R L K+PG S IE + +V +F +G+   HP++  I   L  L   +   GY  D SFVL
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVL 623

Query: 738 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 797
            D++E++K H L  HSER A+A+G++  P   PI++ KNLRVCGDCH+  K I++IT RE
Sbjct: 624 HDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSRE 683

Query: 798 IIVRDSNRFHHFKDGICSCGDYW 820
           II+RD+NRFHHFKDG CSC DYW
Sbjct: 684 IILRDANRFHHFKDGFCSCRDYW 706



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 178/396 (44%), Gaps = 42/396 (10%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           + V S T +++ YA  G+++ +R  F+ +  RN  +W +M+  Y++ G + +A + F   
Sbjct: 203 RNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM 262

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
                  P+     PV              C+ + +GF               + G+ + 
Sbjct: 263 -------PEH----PVAA------------CNAMMVGF--------------GQRGMVDA 285

Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
           A+ +F+ M  RD G+W+AMI  Y Q+   +EAL    EM   GV  +  +V SIL VCA 
Sbjct: 286 AKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAA 345

Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
              +  G  +H  +++   + ++F  + LI MY K G +  A RVF     +D+V WNS+
Sbjct: 346 LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSM 405

Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           I  Y Q      A G F  M+ AG+ PD +T +   +  +     +  R +   +     
Sbjct: 406 ITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSS 465

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVF 435
                   + +VD+  + G++  A  + + +PV+ D + W  L+ G  +    +E  E  
Sbjct: 466 IRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEF- 523

Query: 436 QMMEECNEINP-NQGTYVSILPAYSHVGALRQGIKI 470
              ++  E+ P N G YV +   Y+ VG      K+
Sbjct: 524 -AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKM 558



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
           E  E+ +  +     +  HV+    L     +      +  +V F    G +  ++  F+
Sbjct: 233 ERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF-GQRGMVDAAKTVFE 291

Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
            +  R+  TW++MI  Y +   L EA+  F +  L  G+RP++ +   +L  C  L    
Sbjct: 292 KMCERDDGTWSAMIKAYEQNEFLMEALSTFREM-LWRGVRPNYPSVISILTVCAALAVLD 350

Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++H ++L+  F+ DVF  ++L+ MY + G  + A+++F     +D   WN+MI+GY 
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI-HLYIVKHGLEFNL 279
           Q G   +AL I  +MRL G+S D IT    L  C+ +  +  G  I +   V   +    
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 319
              + ++++  + G++  A  +   M +E D V W +++ A
Sbjct: 471 EHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 144/345 (41%), Gaps = 59/345 (17%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N  I   A+ G +  A   F+ M  R   S+N+++A Y ++  P  A G F  M      
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
            DL +  +L S               G  +RR                      +  A A
Sbjct: 78  -DLASYNALIS---------------GLSLRR--------------------QTLPDAAA 101

Query: 403 VFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
               +P    V+S+ +L+ GY ++GL ++AI +FQ M E N +     +Y  +L      
Sbjct: 102 ALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHV-----SYTVLLGGLLDA 156

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
           G + +  ++   +       DV   T ++  Y + GRI +A +LF ++P+ + V W A+I
Sbjct: 157 GRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMI 212

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           S +  +G+ + A   F  M +     + +++ ++L     +G V +    F+ M E    
Sbjct: 213 SGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEH--- 265

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
            P       MV  FG+ G +  A    + M  R D + W A++ A
Sbjct: 266 -PVAACNAMMVG-FGQRGMVDAAKTVFEKMCERDDGT-WSAMIKA 307


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/516 (40%), Positives = 319/516 (61%), Gaps = 3/516 (0%)

Query: 305 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
           M  RD+ SW S+IA Y Q++ P  A G    M +   +P+  T  SL             
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
             +H   ++  W  +DV +G+A++DMYA+ G ++ A AVF+ L  K+ +SWN LI G+A+
Sbjct: 61  EQIHALTVKYDWH-DDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
            G     + +F  M+  N       TY S+  A + +GAL QG  +HA +IK+      F
Sbjct: 120 KGDGETTLLMFAEMQR-NGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF 178

Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           V   ++DMY K G + DA  +F  V +   V WN++++    +G G +A+  F +M   G
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           V  + ITF+S+LTACSH GLV EG++YF MM+E   ++P + HY  +VDL GRAG L  A
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKEH-NLEPEIDHYVTVVDLLGRAGLLNDA 297

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
             FI  MP++P A++WGALLG+CR+H N ++G  A+D +FE+D ++ G  VL+ NIYA+ 
Sbjct: 298 LVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYAST 357

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           G+W+    VR + +  G+KK P  S +E+ N V +F   + THP+ E+IY +   ++ ++
Sbjct: 358 GQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQI 417

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
           +  GYVP+  +VL  V+E E++  L  HSE++A+AF +I+ P  + I+I KN+R+CGDCH
Sbjct: 418 RKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCH 477

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +  ++IS++ EREI+VRD+NRFHHF  G CSCGDYW
Sbjct: 478 SAFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 161/320 (50%), Gaps = 8/320 (2%)

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD--- 161
           +S R++ +W S+I+ Y +     EA+            +P+ +TF  +LKA         
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGR-FKPNGFTFASLLKAAGASASSGI 59

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G++IH   +K  +  DV+V ++LL MY R G  ++A  +FD +  ++  SWNA+I+G+ +
Sbjct: 60  GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
            G+    L +  EM+  G      T +S+    A    +  G  +H +++K G   + FV
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 179

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N +++MYAK G M  A +VFD + ++D+V+WNS++ A+ Q      A   F  M++ G+
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-AVVDMYAKLGIINSA 400
             + +T +S+ +  +     +  +    F M +   +E  I     VVD+  + G++N A
Sbjct: 240 HLNQITFLSILTACSHGGLVKEGKQY--FDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDA 297

Query: 401 CAVFEGLPVKDVIS-WNTLI 419
                 +P+K   + W  L+
Sbjct: 298 LVFIFKMPMKPTAAVWGALL 317



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 5/260 (1%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           +++HAL V       V+  + L++ YA  G +  +   FD +  +N  +WN++I+ + R 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
           G     +  F +    +G     +T+  V  A      L  GK +H  ++K G     FV
Sbjct: 121 GDGETTLLMFAEMQ-RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 179

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
             ++L MY + G    ARK+FD +  +D  +WN+M++ + Q G   EA+   +EMR  GV
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
            ++ IT  SIL  C+    +  G      + +H LE  +     ++++  + G++  AL 
Sbjct: 240 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 301 -VFDQMMERDVVSWNSIIAA 319
            +F   M+     W +++ +
Sbjct: 300 FIFKMPMKPTAAVWGALLGS 319



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 10/168 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
           L   K +HA ++ SG+  + F    +++ YA  G +  +R  FDH+  +++ TWNSM++ 
Sbjct: 158 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTA 217

Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLK---LGF 174
           + + G   EAV  F +     G+  +  TF  +L AC +  LV   K +  ++K   L  
Sbjct: 218 FAQYGLGREAVTHFEEMR-KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEP 276

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
           E D +V  +++ +  R GL N A      MP++ + + W A++ G C+
Sbjct: 277 EIDHYV--TVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCR 321


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/711 (35%), Positives = 387/711 (54%), Gaps = 35/711 (4%)

Query: 50  FDDLFQSCTKLHHVK-----RLHALLVVSGKIKTVFSSTKLVNFYA-------------N 91
           F    ++C +   +K       H L    G  + V++S  L+N Y+             +
Sbjct: 107 FSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNS--LLNMYSTCLTEVPYLGTAYD 164

Query: 92  LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
             +    R  FD +  RNV  WN+MIS YV+  RL EA   F +  +  G+RP   +F  
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMF-RTMMRMGIRPTPVSFVN 223

Query: 152 VLKACRNLVD---GKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPV 206
           V  A   + D      ++  V+KLG ++  D FV +S + MY   G  + AR++FD    
Sbjct: 224 VFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLE 283

Query: 207 RDSGSWNAMISGYCQSGNAVEALDILDE-MRLEGVSMDPITVASILPVCARSDNILSGLL 265
           R++  WN MI GY Q+   +EA+D+  + M  E   +D +T  S L   ++   +  G  
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQ 343

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H YI+K      + + N +I MY++ G +  + +VF  M+ERDVV+WN++++A+ Q+  
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
                     MQ+ G   D +TL +L S+ + L      +  H +++R G   E   +  
Sbjct: 404 DDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG--MDG 461

Query: 386 AVVDMYAKLGIINSACAVFEGLPV--KDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 443
            ++DMYAK G+I +A  +FE      +D  +WN +I GY QNGL+ E   VF+ M E N 
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQN- 520

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + PN  T  SILPA + +G +  G +IH   I+  L  +VFV T L+DMY K G I  A 
Sbjct: 521 VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAE 580

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
           ++F +    +SV +  +I  +G HG G++AL+ F  ML  G++PD +TFV++L+ACS++G
Sbjct: 581 NVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA-SIWGA 622
           LV EG R F  M+ E+ I+P  +HY C+ D+ GR G +  A+ F++ +    +   IWG+
Sbjct: 641 LVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGS 700

Query: 623 LLGACRIHGNMELGAVASDRLFEVD--SENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           LLGACRIHG  ELG V +++L E++  S   GY+VL+SNIYA  G W+ VD VR   R +
Sbjct: 701 LLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQK 760

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
           GL K  G S +EV   V+ F + +  HP+  +IY  L  L  +MK  GY P
Sbjct: 761 GLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 270/534 (50%), Gaps = 37/534 (6%)

Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY-QFTLTSGLRPDFYTFPPVLKAC-- 156
           H FD I       WN++I  ++ C  +      FY +   +   + D YTF   LKAC  
Sbjct: 58  HLFDSIPRPTTVLWNTIIIGFI-CNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQ 116

Query: 157 -RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCR-------------FGLANVARKLFD 202
            R+L  GK +HC VL+  F     V  SLL+MY               F   ++ R++FD
Sbjct: 117 ARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFD 176

Query: 203 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 262
            M  R+  +WN MIS Y ++   +EA  +   M   G+   P++  ++ P   R ++  +
Sbjct: 177 TMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDN 236

Query: 263 GLLIHLYIVKHGLEF--NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
             +++  +VK G ++  + FV ++ I MYA+ G +  A  +FD  +ER+   WN++I  Y
Sbjct: 237 ANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGY 296

Query: 321 EQSNDPITAHGFFT-TMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
            Q+N PI A   F   M+      D +T +S  + ++QL      R +H +I++    ++
Sbjct: 297 VQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQ 356

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIE-VFQMM 438
            V+I NA++ MY++ G I ++  VF  +  +DV++WNT+++ + QNGL  E +  VF+M 
Sbjct: 357 -VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQ 415

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR 498
           ++   ++    T  ++L   S++ +   G + HA +I++ + F+      L+DMY K G 
Sbjct: 416 KQGFMVDSV--TLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGL 472

Query: 499 IDDAMSLFYQVPR--SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           I  A  LF +          WNA+I+ +  +G  ++    FR+M+++ VRP+ +T  S+L
Sbjct: 473 ITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASIL 532

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHN 606
            AC+  G +  G++        F I+  L         ++D++ ++G +  A N
Sbjct: 533 PACNPMGTIGLGKQI-----HGFAIRCFLNQNVFVGTALLDMYSKSGAITYAEN 581



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 237/489 (48%), Gaps = 38/489 (7%)

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVS 241
           S L   CR G  + A  LFD +P   +  WN +I G+  +   ++AL     MR      
Sbjct: 42  SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK---------- 291
            D  T +S L  CA++ ++  G  +H ++++     +  V N+L+NMY+           
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161

Query: 292 ---FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
              F       RVFD M +R+VV+WN++I+ Y ++   I A   F TM + GI+P  ++ 
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221

Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           V++   V ++ND  N+  ++G +++ G  +++D  + ++ + MYA+LG ++ A  +F+  
Sbjct: 222 VNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCC 281

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
             ++   WNT+I GY QN    EAI++F  + E  +   +  T++S L A S +  L  G
Sbjct: 282 LERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLG 341

Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
            ++HA ++K+     V +   ++ MY +CG I  +  +F  +     V WN ++S    +
Sbjct: 342 RQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQN 401

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH--- 584
           G  D+ L    +M  +G   D +T  +LL+  S            ++  +E G + H   
Sbjct: 402 GLDDEGLMLVFEMQKQGFMVDSVTLTALLSLAS------------NLRSQEIGKQAHAYL 449

Query: 585 LKHY-------GCMVDLFGRAGHLGMAHN-FIQNMPVRPDASIWGALLGACRIHGNMELG 636
           ++H        G ++D++ ++G +  A   F +N     D + W A++     +G  E G
Sbjct: 450 IRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEG 509

Query: 637 AVASDRLFE 645
                ++ E
Sbjct: 510 FAVFRKMIE 518


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/600 (38%), Positives = 347/600 (57%), Gaps = 48/600 (8%)

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
           +H + +K  +  + FVS+ L+ +Y+  K   + +A  +FD++  R ++ WN+II  Y ++
Sbjct: 35  LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVEN 94

Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
                    F  +    + PD  TL  +    A+L   +  + +HG  ++ G F  DV +
Sbjct: 95  QFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG-FGSDVFV 152

Query: 384 GNAVVDMYAKLGIINSACAVFEGL------------------------------------ 407
             ++V+MY+K G I+ A  VF+G+                                    
Sbjct: 153 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSAL 212

Query: 408 ------PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
                 P+ D+++WN +I GY  NG   +A+++F MM +     P+  T VS+L A S +
Sbjct: 213 ELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS-RPSHATLVSVLSAVSGL 271

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
             L +G  IH+ + KN    D  + T L++MY KCG I+ A+++F  + +     W AII
Sbjct: 272 AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAII 331

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
              GIHG  + AL  F +M   G++P+ I F+ +L AC+H+GLV +G++YF MM  E+ I
Sbjct: 332 VGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKI 391

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P L+HYGC+VD+  RAGHL  A N I+NMP+ P+  IW +LLG  R HG +++G  A+ 
Sbjct: 392 EPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQ 451

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           R+ EV  E +G Y+L+SN+YA  G WE V  VR +   RG +K PG SS+E    +  F 
Sbjct: 452 RVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFI 511

Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE-EDEKEHILTSHSERLAIAF 760
            G+ +HP+ ++IY ++  +  K+K +G+VPD + VL  +E E EKE  L +HSERLAIAF
Sbjct: 512 VGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAF 571

Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           G+I+  P  PI+I KNLRVC DCH+ TK +S+I  REIIVRD+ RFHHFK+G CSC DYW
Sbjct: 572 GLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 193/422 (45%), Gaps = 50/422 (11%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYAN--LGDLSFSRHTFDHISYRNV 110
           LFQ+C+    V++LHA  + +      F S++L+  Y++  + DL ++R  FD I  R++
Sbjct: 22  LFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSL 81

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHC 167
             WN++I  YV      + +  F++  L     PD +T P V+K C  L    +GK+IH 
Sbjct: 82  IHWNTIIKCYVENQFSHDGIVLFHE--LVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHG 139

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS-----------GSWNAMI 216
             LK+GF  DVFV  SL++MY + G  + ARK+FD M  +D             SWNAMI
Sbjct: 140 LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMI 199

Query: 217 SGYCQSGNAVEALDILDEM---------------RLEGVSMDPI---------------- 245
           +GY +SG+   AL++  +M                L G  MD +                
Sbjct: 200 NGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHA 259

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           T+ S+L   +    +  G  IH Y+ K+G E +  +  +LI MYAK G +  AL VF  +
Sbjct: 260 TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAI 319

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
            ++ V  W +II           A   F  M + G++P+ +  + + +         + R
Sbjct: 320 QKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGR 379

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQ 424
                +M        +     +VD+  + G +  A    E +P+  + + W +L+ G   
Sbjct: 380 QYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRN 439

Query: 425 NG 426
           +G
Sbjct: 440 HG 441



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 228/505 (45%), Gaps = 63/505 (12%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 209
           + + C    + +++H   LK       FV++ LL +Y    + ++  AR +FD +  R  
Sbjct: 22  LFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSL 81

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             WN +I  Y ++  + + + +  E+  E +  D  T+  ++  CAR   +  G  IH  
Sbjct: 82  IHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGKQIHGL 140

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII------------ 317
            +K G   ++FV  +L+NMY+K G +  A +VFD M+++DVV WNS+I            
Sbjct: 141 ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMIN 200

Query: 318 ------------------------------AAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
                                         A YE +   + A   F  M + G +P   T
Sbjct: 201 GYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHAT 260

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
           LVS+ S V+ L      R +H ++ + G F  D I+G ++++MYAK G I SA  VF  +
Sbjct: 261 LVSVLSAVSGLAVLGKGRWIHSYMEKNG-FELDGILGTSLIEMYAKCGCIESALTVFRAI 319

Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHVGALRQ 466
             K V  W  +I G   +G+A+ A+ +F  +E C   + PN   ++ +L A +H G +  
Sbjct: 320 QKKKVGHWTAIIVGLGIHGMANHALALF--LEMCKTGLKPNAIIFIGVLNACNHAGLVDD 377

Query: 467 GIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRS-SSVPWNAIISC 523
           G + +  ++ N    +  +    CLVD+  + G +++A +    +P S + V W +++  
Sbjct: 378 G-RQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 436

Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
              HG+ D      +++++  V P+ I    LL+    +  + E   +   M  + G + 
Sbjct: 437 SRNHGKIDIGEYAAQRVIE--VAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFR- 493

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFI 608
             K  GC         H G  H FI
Sbjct: 494 --KDPGC-----SSVEHKGTLHEFI 511


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/617 (37%), Positives = 354/617 (57%), Gaps = 38/617 (6%)

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARS 257
           + D  P R +  +N ++ G   +    +AL +   MR +G +  P   T    L  CA +
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
           D ++ G  IH    + GL+ N+FV+++ I+MYA+ G    A ++F++M  RDVVSWN++I
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 318 AAYEQSNDPITAHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
           + +  +     A   F  +      +PD  T+    SI+  +   R              
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTM---ASILPSMGKAR-------------- 238

Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
            +ED+ +   V                F+ +  K +ISWN ++  Y  N +  EA+E+F 
Sbjct: 239 -VEDIALLKGV----------------FDEMRFKGLISWNAMLAVYTNNEMHVEAVELFM 281

Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
            M++ + I P+  T  ++LP+   V AL  G +IH  + +  +C  + +   L+DMY  C
Sbjct: 282 RMQK-DGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANC 340

Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
           G + +A  +F  +     V W +IIS +G HG G +A++ F +M  +G+ PD I FV++L
Sbjct: 341 GCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAIL 400

Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
            ACSH+GL+  G+ YF+ M  EF I P L+HY CMVDL GRAG +  A++FI  MP++P+
Sbjct: 401 AACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPN 460

Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
             +WGALLGACRIH NM++G +A+D L  +  +  GYYVL+SNIYA  G+W  V  VRS+
Sbjct: 461 ERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSV 520

Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
              +G+KK PG S+ E+ ++V  F+ G+ +HP+ + IY +L  L  +++ +GY P+    
Sbjct: 521 MESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEAT 580

Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
           L DVEE++KE  L+ HSE+LAIAF +I++ P +PI+I  NLR C DCH+  K IS I  R
Sbjct: 581 LHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGR 640

Query: 797 EIIVRDSNRFHHFKDGI 813
           EII++D NR H+ K  I
Sbjct: 641 EIILKDVNRIHYMKCNI 657



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 203/402 (50%), Gaps = 51/402 (12%)

Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           PD YT+P  LK+C     LV G++IH S  +LG + +VFVA S + MY R G  + A ++
Sbjct: 120 PDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQM 179

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM-RLEGVSMDPITVASILPVC--ARS 257
           F++M  RD  SWNAMISG+  +G    A+D+  E+  L+    D  T+ASILP    AR 
Sbjct: 180 FEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARV 239

Query: 258 DNI--LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
           ++I  L G                                     VFD+M  + ++SWN+
Sbjct: 240 EDIALLKG-------------------------------------VFDEMRFKGLISWNA 262

Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
           ++A Y  +   + A   F  MQ+ GI+PD +TL ++     +++     + +H  I RR 
Sbjct: 263 MLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRR 322

Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 435
                +++ NA++DMYA  G +  A  VF+ +  +DV+SW ++I+ Y ++G   EAI++F
Sbjct: 323 -MCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLF 381

Query: 436 QMMEECNE-INPNQGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMY 493
           + M  C + + P+   +V+IL A SH G L  G    ++   +  +   +    C+VD+ 
Sbjct: 382 EKM--CGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLL 439

Query: 494 GKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
           G+ G I +A      +P + +   W A++    IH   D  L
Sbjct: 440 GRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGL 481



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 150/356 (42%), Gaps = 18/356 (5%)

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
           LL LV      A L   R + +   F++R         +   ++  YA    + +A AV 
Sbjct: 18  LLRLVDSCRAPAHLRSLRAAHARLLFLLRLPSHPASAAVRVKLIQAYAACAALPAARAVL 77

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGA 463
           +  P +  + +N L+ G     L  +A+ +F  M  + +   P+  TY   L + +    
Sbjct: 78  DASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDG 137

Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
           L  G +IH+   +  L  +VFVA   + MY +CGR DDA  +F ++     V WNA+IS 
Sbjct: 138 LVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISG 197

Query: 524 HGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
               G   +A++ FR+++  +  +PD  T  S+L +   + +  E       + +E   K
Sbjct: 198 FAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARV--EDIALLKGVFDEMRFK 255

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNF--IQNMPVRPDASIWGALLGACRIHGNMELGAVAS 640
             +     +        H+     F  +Q   + PDA     +L +C     + LG    
Sbjct: 256 GLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLG---- 311

Query: 641 DRLFEV-DSENVGYYVLMSN----IYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
            R+ EV     +   +L+ N    +YAN G    + E R +    G +    W+SI
Sbjct: 312 KRIHEVIKRRRMCSSMLLENALMDMYANCG---CLKEARDVFDSMGTRDVVSWTSI 364


>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
          Length = 562

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/556 (38%), Positives = 336/556 (60%), Gaps = 3/556 (0%)

Query: 267 HLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           H  I+K GL  + F ++NL+   A   +G M +A  +F QM E     +N+++  + +  
Sbjct: 8   HARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHVKDM 67

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +   A   +  M + G++PD  T  +L    A+L        VH  I++ G    DV + 
Sbjct: 68  NTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLG-LENDVFVQ 126

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
           N+++ MY K G I   CAVFE +  + V SW+ LIT +A  G+ S+ + +   M      
Sbjct: 127 NSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYW 186

Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
              +   VS+L A +H+GAL  G  +H  +++N    +V V T L++MY KCG +   M 
Sbjct: 187 RAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMC 246

Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
           LF ++ + + + ++ +IS   +HG G + L  F +ML++G+ PD I +V +L ACSH+GL
Sbjct: 247 LFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGL 306

Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
           V EG + F+ M+ E GI+P ++HYGCMVDL GRAG +  A   I++MP+ P+  +W +LL
Sbjct: 307 VQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLL 366

Query: 625 GACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKK 684
            A ++H N++ G +A+ +LF++DS+    YV++SN+YA   +WE V   R+    +GL +
Sbjct: 367 SASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQ 426

Query: 685 TPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDE 744
            PG+S +EV  K+  F + +  HP+ E +Y+ L  +  ++K  GY PD + VL DV+E+E
Sbjct: 427 RPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLCDVDEEE 486

Query: 745 KEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSN 804
           K+  L+ HS++LAIA+ +I +   SP++I +NLR+C DCH +TK IS I +REI VRD +
Sbjct: 487 KKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREITVRDRH 546

Query: 805 RFHHFKDGICSCGDYW 820
           RFHHFKDG CSC DYW
Sbjct: 547 RFHHFKDGACSCRDYW 562



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 193/370 (52%), Gaps = 7/370 (1%)

Query: 163 KKIHCSVLKLGFEWDVFVAASLLHM--YCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
           K+ H  +LK G   D F A++L+       +G  + A  +F  M    S  +N M+ G+ 
Sbjct: 5   KQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGHV 64

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           +  N  EAL    EM   GV  D  T  ++L  CAR   +  G+ +H +I+K GLE ++F
Sbjct: 65  KDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVF 124

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V N+LI+MY K G +     VF+QM ER V SW+++I A+               M   G
Sbjct: 125 VQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEG 184

Query: 341 I-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
             + +   LVS+ S    L      RSVHGF++R    + +VI+  ++++MY K G +  
Sbjct: 185 YWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGL-NVIVETSLIEMYLKCGXLYK 243

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
              +F+ +  K+ +S++ +I+G A +G   E + +F  M E   + P+   YV +L A S
Sbjct: 244 GMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLE-QGLEPDDIVYVGVLNACS 302

Query: 460 HVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPW 517
           H G +++G++   R+ +++ +   +    C+VD+ G+ G+ID+A+ L   +P   + V W
Sbjct: 303 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 362

Query: 518 NAIISCHGIH 527
            +++S   +H
Sbjct: 363 RSLLSASKVH 372



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 190/395 (48%), Gaps = 23/395 (5%)

Query: 60  LHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMI 117
           +   K+ HA ++  G     F ++ LV   A  + G + ++   F  +     + +N+M+
Sbjct: 1   MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60

Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGF 174
             +V+     EA+   Y+     G++PD +T+P +LKAC  L    +G ++H  +LKLG 
Sbjct: 61  RGHVKDMNTEEAL-ITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 119

Query: 175 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
           E DVFV  SL+ MY + G   V   +F+ M  R   SW+A+I+ +   G   + L +L +
Sbjct: 120 ENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGD 179

Query: 235 MRLEGV-SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 293
           M  EG    +   + S+L  C     +  G  +H +++++    N+ V  +LI MY K G
Sbjct: 180 MSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCG 239

Query: 294 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
            +   + +F +M +++ +S++ +I+              FT M + G++PD +  V +  
Sbjct: 240 XLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGV-- 297

Query: 354 IVAQLNDCRNSRSVHGFI-----MRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGL 407
               LN C ++  V   +     M+    +E  I     +VD+  + G I+ A  + + +
Sbjct: 298 ----LNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSM 353

Query: 408 PVK--DVISWNTLITG-YAQNGLASEAIEVFQMME 439
           P++  DV+ W +L++     N L +  I   Q+ +
Sbjct: 354 PMEPNDVL-WRSLLSASKVHNNLQAGEIAAKQLFK 387


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 258/760 (33%), Positives = 389/760 (51%), Gaps = 76/760 (10%)

Query: 73  SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
           S     V ++   + +    G++  +R  FD +  R   ++N++I+ Y R      A+  
Sbjct: 11  SSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGL 70

Query: 133 FYQF---------TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           F++           L +GL    +T P    A  ++     +  SV+            S
Sbjct: 71  FHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASI----PLPPSVVSF---------TS 117

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           LL  Y R GL   A +LF  MP R+  ++  ++ G+  +G   EA  + DEM  + V   
Sbjct: 118 LLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDV--- 174

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
                      AR+  +LSG                         Y + G +  A  +FD
Sbjct: 175 ----------VART-AMLSG-------------------------YCQAGRITEARALFD 198

Query: 304 QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI--VAQLNDC 361
           +M +R+VVSW ++I+ Y Q+   I A   F  M           LV       V    D 
Sbjct: 199 EMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDL 258

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
            N+   H            V   NA++  + + G++++A A+FE +  +D  +W+ +I  
Sbjct: 259 FNAMPDH-----------PVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKV 307

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           Y QN    EA+  F+ M  C  I PN  +++SIL   + +     G ++HA +++     
Sbjct: 308 YEQNEFLMEALSTFREML-CRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDT 366

Query: 482 DVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQML 541
           DVF  + L+ MY KCG +D A  +F        V WN++I+ +  HG G++AL  F  + 
Sbjct: 367 DVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLR 426

Query: 542 DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHL 601
              + PD IT++ +LTACS++G V EG+  F+ M     I+    HY CMVDL GRAG +
Sbjct: 427 LARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLV 486

Query: 602 GMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIY 661
             A + I NMPV PDA IWGAL+GACR+H N E+  VA+ +L E++  + G YVL+S+IY
Sbjct: 487 DEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIY 546

Query: 662 ANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNL 720
            + G+WE   ++R     R L K+PG S IE N  V +F +G+  +HP++  I + L  L
Sbjct: 547 TSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEEL 606

Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVC 780
              +   GY  D SFVL DV+E++K   L  HSER A+A+G++  P   PI++ KNLRVC
Sbjct: 607 DGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVC 666

Query: 781 GDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           GDCH+  K I++IT REII+RD+NRFHHFKDG+CSC DYW
Sbjct: 667 GDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 13/183 (7%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LHA ++       VF+ + L+  Y   G+L  ++  F+    ++V  WNSMI+ Y + 
Sbjct: 353 RELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQH 412

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFV 180
           G   EA+  F    L   + PD  T+  VL AC     + +G++I  S   +G    + +
Sbjct: 413 GLGEEALGIFDDLRLAR-MAPDGITYIGVLTACSYTGKVKEGREIFNS---MGMNSSIRL 468

Query: 181 AAS----LLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDILDEM 235
            A+    ++ +  R GL + A  L ++MPV  D+  W A++ G C+     E  ++  + 
Sbjct: 469 GAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALM-GACRMHKNAEIAEVAAKK 527

Query: 236 RLE 238
            LE
Sbjct: 528 LLE 530


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/595 (36%), Positives = 349/595 (58%), Gaps = 4/595 (0%)

Query: 227 EALDILDEMRLEGV-SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           EAL++ + + L G   MD  T  +++  C    +I     +  Y++  GL+ + ++ N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + M+ K GMM  A R+FD+M E++++SWN+II     + D   A   F  M Q       
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
              V++    A L      R +H   ++ G    DV +  A++DMY+K G I  A  VF+
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTG-VGGDVFVACALIDMYSKCGSIEDAQCVFD 291

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P K  + WN++I GYA +G + EA+ ++  M +   +  +  T+  I+   + + +L 
Sbjct: 292 QMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSG-VKIDNFTFSIIIRICARLASLE 350

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
              + HA ++++    D+   T LVD+Y K GRI+DA  +F  +P  + + WNA+I+ +G
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG+G +A+  F +ML EG+ P+H+TF+++L+ACS+SGL   G   F  M  +  IKP  
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
            HY CM++L GR G L  A   I++ P +P  ++W ALL ACR+H N ELG  A+++L+ 
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +  E +  YV++ NIY   G+ E    V    + RGL+  P  S IE+  +   F +G++
Sbjct: 531 MGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
            H + ++IY +L  L  ++   GYVP   F+L DV+E E E +L  HSE+LAIAFG+I++
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQE-ERVLLYHSEKLAIAFGLINT 649

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              +P+QI ++ R+CGDCH+  K I+ +T REI+VRD++RFHHFKDG CSCGDYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 187/382 (48%), Gaps = 14/382 (3%)

Query: 50  FDDLFQSCTKLHH---VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +D L  +C  L     VK++   ++ SG     +   +++  +   G +  +R  FD + 
Sbjct: 134 YDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMP 193

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCF---YQFTLTSGLRPDFYTFPPVLKACRNL---V 160
            +N+ +WN++I   V  G   EA   F   +Q    +G R     F  +++A   L    
Sbjct: 194 EKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSR----MFVTMIRASAGLGLIF 249

Query: 161 DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
            G+++H   LK G   DVFVA +L+ MY + G    A+ +FD MP + +  WN++I+GY 
Sbjct: 250 AGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309

Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
             G + EAL +  EMR  GV +D  T + I+ +CAR  ++      H  +V+HG   ++ 
Sbjct: 310 LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIV 369

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
            +  L+++Y+K+G +  A  VFD M  ++V+SWN++IA Y      + A   F  M   G
Sbjct: 370 ANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEG 429

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           + P+ +T +++ S  +          +   + R        +    ++++  + G+++ A
Sbjct: 430 MVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEA 489

Query: 401 CAVFEGLPVKDVIS-WNTLITG 421
            A+ +  P K  ++ W  L+T 
Sbjct: 490 FALIKDAPFKPTVNMWAALLTA 511


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 347/613 (56%), Gaps = 45/613 (7%)

Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
           ++ S L   AR   +L+  L H  I+K GL  +  + N L+N Y K G+++ AL++FD +
Sbjct: 6   SLQSQLCSAARQSPLLAKKL-HAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDAL 64

Query: 306 MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN--DCRN 363
             RD V+W S++ A   SN P  A     ++   G  PD     SL    A L     + 
Sbjct: 65  PRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQ 124

Query: 364 SRSVHG-FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
            + VH  F +    F +D ++ ++++DMYAK G+ +   AVF+ +   + ISW T+I+GY
Sbjct: 125 GKQVHARFFLSP--FSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGY 182

Query: 423 AQNGLASEAIEVFQ----------------MMEECNEINP--------NQGTYV------ 452
           A++G   EA  +F+                +++  N ++         ++G  V      
Sbjct: 183 ARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVL 242

Query: 453 -SILPAYSHVGALRQGIKIHARVI----KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
            S++ A +++     G ++H  VI    ++CL    F++  L+DMY KC  +  A  +F 
Sbjct: 243 SSVVGACANLALWELGKQMHGVVITLGYESCL----FISNALIDMYAKCSDLVAAKYIFC 298

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
           ++ R   V W +II     HGQ ++AL  + +M+  GV+P+ +TFV L+ ACSH+GLVS+
Sbjct: 299 EMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSK 358

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
           G+  F  M E+ GI P L+HY C++DLF R+GHL  A N I+ MPV PD   W ALL +C
Sbjct: 359 GRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSC 418

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
           + HGN ++    +D L  +  E+   Y+L+SNIYA  G WE V +VR L      KK PG
Sbjct: 419 KRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPG 478

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
           +S I++     +FY G  +HP  ++I   +R L  +M+  GY PD S VL D+++ EKE 
Sbjct: 479 YSCIDLGKGSHVFYAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKER 538

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
            L  HSERLA+A+G++ + P + I+I KNLRVCGDCH   K IS IT REI VRD+ R+H
Sbjct: 539 QLFWHSERLAVAYGLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYH 598

Query: 808 HFKDGICSCGDYW 820
           HFKDG CSC D+W
Sbjct: 599 HFKDGNCSCNDFW 611



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 198/438 (45%), Gaps = 41/438 (9%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
            K+LHA ++ +G  +       L+N Y   G +  +   FD +  R+   W S+++    
Sbjct: 22  AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL-----VDGKKIHCSVLKLGFEWD 177
             R   A+    +  L++G  PD + F  ++KAC NL       GK++H       F  D
Sbjct: 82  SNRPHRALS-ISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140

Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC----------------- 220
             V +SL+ MY +FGL +  R +FD +   +S SW  MISGY                  
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200

Query: 221 --------------QSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLL 265
                         QSGN V+A  +  EMR EG+S+ DP+ ++S++  CA       G  
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260

Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
           +H  ++  G E  LF+SN LI+MYAK   +  A  +F +M  +DVVSW SII    Q   
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320

Query: 326 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 385
              A   +  M  AG++P+ +T V L    +        R++   ++        +    
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYT 380

Query: 386 AVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
            ++D++++ G ++ A  +   +PV  D  +W  L++   ++G    A+ +   +      
Sbjct: 381 CLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPE 440

Query: 445 NPNQGTYVSILPAYSHVG 462
           +P+  +Y+ +   Y+  G
Sbjct: 441 DPS--SYILLSNIYAGAG 456



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 203/432 (46%), Gaps = 40/432 (9%)

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
            KK+H  ++K G      +  +LL+ Y + GL   A +LFD +P RD  +W ++++    
Sbjct: 22  AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSD--NILSGLLIHLYIVKHGLEFNL 279
           S     AL I   +   G   D    AS++  CA     ++  G  +H          + 
Sbjct: 82  SNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141

Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE------------------ 321
            V ++LI+MYAKFG+  +   VFD +   + +SW ++I+ Y                   
Sbjct: 142 VVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYR 201

Query: 322 -------------QSNDPITAHGFFTTMQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSRSV 367
                        QS + + A   F  M+  GI   D L L S+    A L      + +
Sbjct: 202 NLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQM 261

Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
           HG ++  G +   + I NA++DMYAK   + +A  +F  +  KDV+SW ++I G AQ+G 
Sbjct: 262 HGVVITLG-YESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320

Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVA 486
           A EA+ ++  M     + PN+ T+V ++ A SH G + +G  +   ++++  +   +   
Sbjct: 321 AEEALALYDEMVLAG-VKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHY 379

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQMLDEGV 545
           TCL+D++ + G +D+A +L   +P +   P W A++S    HG    A+     +L+  +
Sbjct: 380 TCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLN--L 437

Query: 546 RPDHITFVSLLT 557
           +P+  +   LL+
Sbjct: 438 KPEDPSSYILLS 449



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 41/311 (13%)

Query: 50  FDDLFQSCTKLH--HVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           F  L ++C  L   HVK+   +HA   +S         + L++ YA  G   + R  FD 
Sbjct: 107 FASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDS 166

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ---------FTLTSGL------------- 142
           IS  N  +W +MIS Y R GR  EA   F Q           L SGL             
Sbjct: 167 ISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLF 226

Query: 143 ---------RPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCR 190
                      D      V+ AC NL     GK++H  V+ LG+E  +F++ +L+ MY +
Sbjct: 227 VEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAK 286

Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
                 A+ +F +M  +D  SW ++I G  Q G A EAL + DEM L GV  + +T   +
Sbjct: 287 CSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGL 346

Query: 251 LPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MER 308
           +  C+ +  +  G  L    +  HG+  +L     L++++++ G +  A  +   M +  
Sbjct: 347 IHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNP 406

Query: 309 DVVSWNSIIAA 319
           D  +W +++++
Sbjct: 407 DEPTWAALLSS 417


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/698 (34%), Positives = 385/698 (55%), Gaps = 15/698 (2%)

Query: 53  LFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR- 108
           L ++C     L   K +H  +V  G    +F    L+N Y +      ++  FD++    
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68

Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKI 165
            +  WN +++ Y +     EA++ F +      L+PD YT+P V KAC  L   V GK I
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128

Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
           H  ++K G   D+ V +SL+ MY +      A  LF++MP +D   WN +IS Y QSGN 
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
            +AL+    MR  G   + +T+ + +  CAR  ++  G+ IH  ++  G   + F+S+ L
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           ++MY K G +  A+ +F+QM ++ VV+WNS+I+ Y    D I+    F  M   G++P L
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTL 308

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            TL SL  + ++       + VHG+ +R      DV + ++++D+Y K G +  A  +F+
Sbjct: 309 TTLSSLIMVCSRSARLLEGKFVHGYTIRNR-IQPDVFVNSSLMDLYFKCGKVELAEKIFK 367

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P   V+SWN +I+GY   G   EA+ +F  M + + +  +  T+ S+L A S + AL 
Sbjct: 368 LIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK-SYVESDAITFTSVLTACSQLAALE 426

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +G +IH  +I+  L  +  V   L+DMY KCG +D+A S+F  +P+   V W ++I+ +G
Sbjct: 427 KGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYG 486

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG    AL  F +ML   V+PD + F+++L+AC H+GLV EG  YF+ M   +GI P +
Sbjct: 487 SHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRV 546

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMP-VRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           +HY C++DL GRAG L  A+  +Q  P +R D  +   L  ACR+H N++LGA  +  L 
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLI 606

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           + D ++   Y+L+SN+YA+  KW+ V  VRS  ++ GLKK PG S IE+N K+  F+  +
Sbjct: 607 DKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVED 666

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQ-DVE 741
            +H   E ++  L  L+  M+       KSF    DVE
Sbjct: 667 NSHLHLELVFKCLSYLSDHMED----ESKSFTYHLDVE 700



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 268/489 (54%), Gaps = 13/489 (2%)

Query: 151 PVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM--P 205
           P+L+AC N   L  GK IH  V+ LG + D+F+  +L++ Y    L + A+ +FD+M  P
Sbjct: 8   PLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENP 67

Query: 206 VRDSGSWNAMISGYCQSGNAVEALDILDE-MRLEGVSMDPITVASILPVCARSDNILSGL 264
              S  WN +++GY ++   VEAL++ ++ +    +  D  T  S+   C      + G 
Sbjct: 68  CEIS-LWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGK 126

Query: 265 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
           +IH  ++K GL  ++ V ++L+ MY K      A+ +F++M E+DV  WN++I+ Y QS 
Sbjct: 127 MIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSG 186

Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
           +   A  +F  M++ G +P+ +T+ +  S  A+L D      +H  ++  G F+ D  I 
Sbjct: 187 NFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSG-FLLDSFIS 245

Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE- 443
           +A+VDMY K G +  A  +FE +P K V++WN++I+GY   G     I++F+ M   NE 
Sbjct: 246 SALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY--NEG 303

Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
           + P   T  S++   S    L +G  +H   I+N +  DVFV + L+D+Y KCG+++ A 
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAE 363

Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
            +F  +P+S  V WN +IS +   G+  +AL  F +M    V  D ITF S+LTACS   
Sbjct: 364 KIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLA 423

Query: 564 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 623
            + +G+   +++ E+  +  +    G ++D++ + G +  A +  + +P R D   W ++
Sbjct: 424 ALEKGKEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSWTSM 481

Query: 624 LGACRIHGN 632
           + A   HG+
Sbjct: 482 ITAYGSHGH 490



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 225/445 (50%), Gaps = 9/445 (2%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
           MD   +  +L  C  S ++  G LIH  +V  GL+ ++F+   LIN Y    +  HA  V
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60

Query: 302 FDQMMERDVVS-WNSIIAAYEQSNDPITAHGFFTT-MQQAGIQPDLLTLVSLTSIVAQLN 359
           FD M     +S WN ++A Y ++   + A   F   +    ++PD  T  S+      L+
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                + +H  +++ G  M D+++G+++V MY K      A  +F  +P KDV  WNT+I
Sbjct: 121 RYVLGKMIHTCLIKTGLMM-DIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
           + Y Q+G   +A+E F +M       PN  T  + + + + +  L +G++IH  +I +  
Sbjct: 180 SCYYQSGNFKDALEYFGLMRRFG-FEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238

Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
             D F+++ LVDMYGKCG ++ A+ +F Q+P+ + V WN++IS +G+ G     +  F++
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKR 298

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           M +EGV+P   T  SL+  CS S  + EG ++ H       I+P +     ++DL+ + G
Sbjct: 299 MYNEGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQPDVFVNSSLMDLYFKCG 357

Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM--ELGAVASDRLFEVDSENVGYYVLM 657
            + +A    + +P     S W  ++      G +   LG  +  R   V+S+ + +  ++
Sbjct: 358 KVELAEKIFKLIPKSKVVS-WNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVL 416

Query: 658 SNIYANVGKWEGVDEVRSLARDRGL 682
           +   + +   E   E+ +L  ++ L
Sbjct: 417 TAC-SQLAALEKGKEIHNLIIEKKL 440



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 155/316 (49%), Gaps = 7/316 (2%)

Query: 44  ESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
           E   +       SC +L  + R   +H  L+ SG +   F S+ LV+ Y   G L  +  
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIE 263

Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--- 157
            F+ +  + V  WNSMIS Y   G +   +  F +     G++P   T   ++  C    
Sbjct: 264 IFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRM-YNEGVKPTLTTLSSLIMVCSRSA 322

Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
            L++GK +H   ++   + DVFV +SL+ +Y + G   +A K+F  +P     SWN MIS
Sbjct: 323 RLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMIS 382

Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
           GY   G   EAL +  EMR   V  D IT  S+L  C++   +  G  IH  I++  L+ 
Sbjct: 383 GYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDN 442

Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
           N  V   L++MYAK G +  A  VF  + +RD+VSW S+I AY        A   F  M 
Sbjct: 443 NEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEML 502

Query: 338 QAGIQPDLLTLVSLTS 353
           Q+ ++PD +  +++ S
Sbjct: 503 QSNVKPDRVAFLAILS 518


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/759 (33%), Positives = 399/759 (52%), Gaps = 56/759 (7%)

Query: 63  VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
           +KRL  +L  +    T  + +  ++  + +G ++ +R  FD + ++ + +WNS++S Y  
Sbjct: 1   MKRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFS 60

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAA 182
            G   EA   F + +                   RN+V               W+  V+ 
Sbjct: 61  NGLPKEARQLFDEMSE------------------RNVVS--------------WNGLVSG 88

Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
                Y +  +   AR +F+ MP R+  SW AM+ GY Q G   EA  +   M       
Sbjct: 89  -----YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
             +    ++    R D      L  +  VK     ++  S N+I    + G +  A  +F
Sbjct: 144 WTVMFGGLID-DGRIDKARK--LYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIF 195

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D+M ER+VV+W ++I  Y Q+N    A   F  M +        T VS TS++       
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK-------TEVSWTSMLLGYTLSG 248

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
                  F       M+ VI  NA++  + ++G I+ A  VF+ +  +D  +W  +I  Y
Sbjct: 249 RIEDAEEFF--EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAY 306

Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
            + G   EA+++F  M++   + P+  + +SIL   + + +L+ G ++HA +++     D
Sbjct: 307 ERKGFELEALDLFAQMQK-QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365

Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD 542
           V+VA+ L+ MY KCG +  A  +F +      + WN+IIS +  HG G++AL  F +M  
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425

Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
            G  P+ +T +++LTACS++G + EG   F  M+ +F + P ++HY C VD+ GRAG + 
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVD 485

Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYA 662
            A   I++M ++PDA++WGALLGAC+ H  ++L  VA+ +LFE + +N G YVL+S+I A
Sbjct: 486 KAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545

Query: 663 NVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN-RTHPKYEKIYDELRNLT 721
           +  KW  V  VR   R   + K PG S IEV  KV +F  G  + HP+   I   L    
Sbjct: 546 SRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTD 605

Query: 722 AKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCG 781
             ++  GY PD S VL DV+E+EK   L+ HSERLA+A+G++  P   PI++ KNLRVCG
Sbjct: 606 GLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCG 665

Query: 782 DCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           DCH   K IS++TEREII+RD+NRFHHF +G CSC DYW
Sbjct: 666 DCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 17/186 (9%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           +   L + +++HA LV       V+ ++ L+  Y   G+L  ++  FD  S +++  WNS
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL 172
           +IS Y   G   EA+  F++   +SG  P+  T   +L AC     L +G +I  S+   
Sbjct: 403 IISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM--- 458

Query: 173 GFEWDVFVAASLLHMYC------RFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNA 225
             E    V  ++ H  C      R G  + A +L + M ++ D+  W A++ G C++ + 
Sbjct: 459 --ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL-GACKTHSR 515

Query: 226 VEALDI 231
           ++  ++
Sbjct: 516 LDLAEV 521


>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
 gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/577 (39%), Positives = 340/577 (58%), Gaps = 8/577 (1%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF--GMMRHALRVFDQMM 306
           +IL V    +N+     I  +++ +GL+ +  +SN+++N  A    G + +A  +F  ++
Sbjct: 11  AILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHIL 70

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ-PDLLTLVSLTSIVAQLNDCRNSR 365
                +WNSII  + QS  P+ A  ++  M    +  PD  T         ++   +   
Sbjct: 71  NPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCE 130

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VHG I+R G +  DV++   +V  Y + G +  A  VF+ +P +D+++WN +I+ Y+Q 
Sbjct: 131 EVHGSIIRTG-YERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQA 189

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G   EA+ V+  M   N +  +  T V +L + SHVGAL  G+K+H    +  L  +VFV
Sbjct: 190 GYHQEALRVYDYMRNEN-VGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFV 248

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 545
              L+DMY KCG +D A+ +F  +PR +   WN++I   G+HG GD+A+ FF QML+ GV
Sbjct: 249 GNALIDMYAKCGSLDGALEVFNGMPRDA-FTWNSMIVGFGVHGFGDEAIYFFNQMLEAGV 307

Query: 546 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 605
           RP+ I F+ LL  CSH GLV EG  +FH M  +F +KP +KHYGC+VD++GRAG L  A 
Sbjct: 308 RPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKAL 367

Query: 606 NFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVG 665
             I + P + D  +W  LL + +IH N+ +G +A   L ++ + N G  VL++ IYA   
Sbjct: 368 EIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAGAN 427

Query: 666 KWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK 725
             +GV  +R L + +G+K TPGWS IEV+++V  F   +++HP  E IY +L  +T K  
Sbjct: 428 DEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKLEEVTHKAT 487

Query: 726 SLGYVPDKS-FVLQ-DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
             GYV DKS F+      E+  E   T HSE+LAIAFG+  +P  + ++I KNLRVC DC
Sbjct: 488 MAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCRDC 547

Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           H +TKF+S+   R+IIVRD  RFHHFK G+CSC DYW
Sbjct: 548 HEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 183/374 (48%), Gaps = 7/374 (1%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANL--GDLSFSRHTFDHISYRNV 110
           + Q C  L  +K++ A ++V+G       S  ++NF A    G L +++H F HI     
Sbjct: 15  VLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFRHILNPQT 74

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK---IHC 167
             WNS+I  + +     +A+  + +    S   PD +TF   LKAC  +   KK   +H 
Sbjct: 75  QAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCEEVHG 134

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
           S+++ G+E DV V   L+  Y R G   +AR +FD+MP RD  +WNAMIS Y Q+G   E
Sbjct: 135 SIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQE 194

Query: 228 ALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
           AL + D MR E V +D  T+  +L  C+    +  G+ +H    + GL  N+FV N LI+
Sbjct: 195 ALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNVFVGNALID 254

Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
           MYAK G +  AL VF+  M RD  +WNS+I  +        A  FF  M +AG++P+ + 
Sbjct: 255 MYAKCGSLDGALEVFNG-MPRDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAGVRPNSIA 313

Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
            + L    +              +  +      +     +VDMY + G +  A  +    
Sbjct: 314 FLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEIIGDS 373

Query: 408 PVK-DVISWNTLIT 420
           P + D + W  L++
Sbjct: 374 PWQDDPVLWRILLS 387



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 193/382 (50%), Gaps = 10/382 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN---VARKLFDDMPVRD 208
           VL+ C NL   KKI   V+  G +    ++ S+L+ +C   ++     A+ LF  +    
Sbjct: 15  VLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILN-FCAVSISGSLPYAQHLFRHILNPQ 73

Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIH 267
           + +WN++I G+ QS + V+A+   + M  + VS  D  T +  L  C R   +     +H
Sbjct: 74  TQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALKKCEEVH 133

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
             I++ G E ++ V   L+  Y + G +  A  VFD M ERD+V+WN++I+ Y Q+    
Sbjct: 134 GSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYSQAGYHQ 193

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   +  M+   +  D  TLV L S  + +        +H     +G  + +V +GNA+
Sbjct: 194 EALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKG-LLRNVFVGNAL 252

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DMYAK G ++ A  VF G+P +D  +WN++I G+  +G   EAI  F  M E   + PN
Sbjct: 253 IDMYAKCGSLDGALEVFNGMP-RDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEAG-VRPN 310

Query: 448 QGTYVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
              ++ +L   SH G + +G++  H    K  +   +    C+VDMYG+ G+++ A+ + 
Sbjct: 311 SIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEKALEII 370

Query: 507 YQVP-RSSSVPWNAIISCHGIH 527
              P +   V W  ++S   IH
Sbjct: 371 GDSPWQDDPVLWRILLSSSKIH 392


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/538 (41%), Positives = 314/538 (58%), Gaps = 8/538 (1%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++ +   G +  A RVF  M  +DV SWN++++   ++     A   F  M      
Sbjct: 81  NTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP----- 135

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
             +   VS  ++VA L  C         + R      D I+  A+V  Y   G +  A  
Sbjct: 136 --VRNAVSWNAMVAALA-CSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAME 192

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F  +PV++++SWN ++ GY +N  A +A+ VF+ M E + + PN  T  S+L   S++ 
Sbjct: 193 FFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLS 252

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G ++H   +K  L  +V V T L+ MY KCG ++DA  +F ++     V WNA+IS
Sbjct: 253 ALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMIS 312

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G +A+  F +M DEGV PD IT +++LTAC H+GL   G + F  MQE + I+
Sbjct: 313 GYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIE 372

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P + HY CMVDL  RAG L  A N I +MP  P  S +G LL ACR++ N+E    A+ +
Sbjct: 373 PQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARK 432

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E D +N G YV ++NIYA   KW  V  VR   +D  + KTPG+S +E+      F +
Sbjct: 433 LIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRS 492

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
            +R HP+   I+D+L  L   MK++GYVPD  F L DVE+  K  +L  HSE+LAIAFG+
Sbjct: 493 NDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGL 552

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ P   ++IFKNLR+CGDCHN  K IS+I +REII+RD+ RFHHF+ G CSCGDYW
Sbjct: 553 ISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 194/443 (43%), Gaps = 69/443 (15%)

Query: 82  STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
           ST  V      GDL+ +   F     +   T+N +++ Y +   L    D    F   S 
Sbjct: 15  STVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFD--SI 72

Query: 142 LRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARK 199
             PD  ++  +L                                   C F   ++  AR+
Sbjct: 73  PHPDTVSYNTLLS----------------------------------CHFACGDIDGARR 98

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +F  MPV+D  SWN M+SG  ++G + EA  +   M +         VA++   C+    
Sbjct: 99  VFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAAL--ACSGDMG 156

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
               L  +       + +   VS      Y   G ++ A+  F  M  R++VSWN+++A 
Sbjct: 157 AAEDLFRNAPEKTDAILWTAMVSG-----YMDTGNVQKAMEFFGAMPVRNLVSWNAVVAG 211

Query: 320 YEQSNDPITAHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 378
           Y +++    A   F TM +  I QP+  TL S+    + L+     R VH + M+     
Sbjct: 212 YVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLP-LS 270

Query: 379 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 438
            +V +G +++ MY K G +N AC VF+ +  KD+++WN +I+GYAQ+G   +AI++F+ M
Sbjct: 271 RNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKM 330

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA-----------T 487
           ++   + P+  T +++L A  H G    GI+          CF+               +
Sbjct: 331 KD-EGVVPDWITLLAVLTACIHTGLCDFGIQ----------CFETMQEAYKIEPQIDHYS 379

Query: 488 CLVDMYGKCGRIDDAMSLFYQVP 510
           C+VD+  + G ++ A+++ + +P
Sbjct: 380 CMVDLLCRAGLLERAVNMIHSMP 402



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 192/423 (45%), Gaps = 41/423 (9%)

Query: 72  VSGKIKTVFSSTKLVNFYAN---LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
            S ++KT  +   L+  YA    L  L+ +R  FD I + +  ++N+++S +  CG +  
Sbjct: 36  ASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDG 95

Query: 129 AVDCFYQF---------TLTSGLRPD--------FYTFPPVLKACRNLVDGKKIHCSVLK 171
           A   F            T+ SGL  +         +   PV  A         + CS   
Sbjct: 96  ARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSG-D 154

Query: 172 LGFEWDVFVAA----------SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           +G   D+F  A          +++  Y   G    A + F  MPVR+  SWNA+++GY +
Sbjct: 155 MGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVK 214

Query: 222 SGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
           +  A +AL +   M  +  V  +  T++S+L  C+    +  G  +H + +K  L  N+ 
Sbjct: 215 NSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVT 274

Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
           V  +L++MY K G +  A +VFD+M  +D+V+WN++I+ Y Q    + A   F  M+  G
Sbjct: 275 VGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEG 334

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGF-IMRRGWFMEDVIIG-NAVVDMYAKLGIIN 398
           + PD +TL+++ +       C     +  F  M+  + +E  I   + +VD+  + G++ 
Sbjct: 335 VVPDWITLLAVLTACIHTGLC--DFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLE 392

Query: 399 SACAVFEGLPVKDVIS-WNTLITG-YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
            A  +   +P +   S + TL+T       L        +++E+  +   N G YV +  
Sbjct: 393 RAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQ---NAGAYVQLAN 449

Query: 457 AYS 459
            Y+
Sbjct: 450 IYA 452



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 15/267 (5%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D +  N ++  +   G I+ A  VF  +PVKDV SWNT+++G ++NG + EA  +F++M 
Sbjct: 76  DTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP 135

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             N ++ N    V+ L     +GA     +            D  + T +V  Y   G +
Sbjct: 136 VRNAVSWN--AMVAALACSGDMGAAEDLFRNAPEKT------DAILWTAMVSGYMDTGNV 187

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTA 558
             AM  F  +P  + V WNA+++ +  + + D AL  F+ M+++  V+P+  T  S+L  
Sbjct: 188 QKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLG 247

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS+   +  G R  H    +  +  ++     ++ ++ + G L  A      M  + D  
Sbjct: 248 CSNLSALGFG-RQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTK-DIV 305

Query: 619 IWGALLGACRIHGNMELGAVASDRLFE 645
            W A++     HG    G + + +LFE
Sbjct: 306 AWNAMISGYAQHG----GGMQAIKLFE 328


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/595 (36%), Positives = 349/595 (58%), Gaps = 4/595 (0%)

Query: 227 EALDILDEMRLEGV-SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           EAL++ + + L G   MD  T  +++  C    +I     +  Y++  GL+ + ++ N +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + M+ K GMM  A R+FD+M E++++SWN+II     + D   A   F  M Q       
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
              V++    A L      R +H   ++ G    DV +  A++DMY+K G I  A  VF+
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTG-VGGDVFVACALIDMYSKCGSIEDAQCVFD 291

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P K  + WN++I GYA +G + EA+ ++  M +   +  +  T+  I+   + + +L 
Sbjct: 292 QMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSG-VKIDNFTFSIIIRICARLASLE 350

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
              + HA ++++    D+   T LVD+Y K GRI+DA  +F  +P  + + WNA+I+ +G
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG+G +A+  F +ML EG+ P+H+TF+++L+ACS+SGL   G   F  M  +  IKP  
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
            HY CM++L GR G L  A   I++ P +P  ++W ALL ACR+H N ELG  A+++L+ 
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           +  E +  YV++ NIY   G+ E    V    + RGL+  P  S IE+  +   F +G++
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISS 765
            H + ++IY +L  L  ++   GYVP   F+L DV+E E E +L  HSE+LAIAFG+I++
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQE-ERVLLYHSEKLAIAFGLINT 649

Query: 766 PPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              +P+QI ++ R+CGDCH+  K I+ +T REI+VRD++RFHHFKDG CSCGDYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 208/438 (47%), Gaps = 30/438 (6%)

Query: 50  FDDLFQSCTKLHH---VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +D L  +C  L     VK++   ++ SG     +   +++  +   G +  +R  FD + 
Sbjct: 134 YDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMP 193

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF-----YTFPPVLKACRNL-- 159
            +N+ +WN++I      G L +A D F  F L   +  DF       F  +++A   L  
Sbjct: 194 EKNILSWNTII------GGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGL 247

Query: 160 -VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              G+++H   LK G   DVFVA +L+ MY + G    A+ +FD MP + +  WN++I+G
Sbjct: 248 IFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAG 307

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y   G + EAL +  EMR  GV +D  T + I+ +CAR  ++      H  +V+HG   +
Sbjct: 308 YALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLD 367

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           +  +  L+++Y+K+G +  A  VFD M  ++V+SWN++IA Y      + A   F  M  
Sbjct: 368 IVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLH 427

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
            G+ P+ +T +++ S  +          +   + R        +    ++++  + G+++
Sbjct: 428 EGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLD 487

Query: 399 SACAVFEGLPVKDVIS-WNTLITGYAQNGLASEAIEVFQM----MEECNEINPNQ-GTYV 452
            A A+ +  P K  ++ W  L+T       A    + F++     E+   + P +   YV
Sbjct: 488 EAFALIKDAPFKPTVNMWAALLT-------ACRVHKNFELGKFAAEKLYGMGPEKLSNYV 540

Query: 453 SILPAYSHVGALRQGIKI 470
            +L  Y+  G L +   +
Sbjct: 541 VLLNIYNRSGRLEEAAAV 558


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/596 (36%), Positives = 364/596 (61%), Gaps = 5/596 (0%)

Query: 227 EALDILDEMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
           +AL++ +   LE G  +   T  +++  C    +I     +  Y+V +G E + ++ N +
Sbjct: 114 DALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRV 173

Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
           + M+ K GMM  A R+FD+M  R+ VSW +II+ Y  S + + A   F  M++       
Sbjct: 174 LLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGP 233

Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
            T  ++    A L      R +H   ++ G   +D+ +  A++DMY+K G +  A  VF+
Sbjct: 234 RTFATMIRASAGLEIIFPGRQLHSCAIKAG-LGQDIFVSCALIDMYSKCGSLEDAHCVFD 292

Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
            +P K ++ WN++I GYA +G + EA++++  M +   +  +  T+  I+   S + ++ 
Sbjct: 293 EMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSG-VKMDHFTFSIIIRICSRLASVA 351

Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
           +  ++HA +++N    DV   T LVD Y K G++DDA  +F ++   + + WNA+I+ +G
Sbjct: 352 RAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYG 411

Query: 526 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 585
            HG G++A++ F +ML EG+ P+H+TF+++L+ACS SGL   G   F  M  +  +KP  
Sbjct: 412 NHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRA 471

Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
            H+ CM++L GR G L  A+  I+  P +P A++W ALL ACR+HGN+ELG  A+++L+ 
Sbjct: 472 MHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 531

Query: 646 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 705
           ++ E +  Y+++ NIY + GK +   +V    + +GL+  P  S IEVNN+   F +G++
Sbjct: 532 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDK 591

Query: 706 THPKYEKIYDELRNLTAKMKSLGYVPD-KSFVLQDVEEDEKEHILTSHSERLAIAFGIIS 764
            H + EK+  ++  L   +  LGYVP+ ++F+L DV+E+E E I   HSE+LAIA+G+++
Sbjct: 592 HHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENE-EKIRMYHSEKLAIAYGLLN 650

Query: 765 SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           +  K+P+QI ++ R+C DCH+  K I+ IT+REI++RD++RFHHF+DG CSCGDYW
Sbjct: 651 TLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 247/470 (52%), Gaps = 10/470 (2%)

Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VDGKKIHCS-VLK 171
           S I   V C +  +A++ F  F L  G    + T+  ++ AC  L  + G K  C+ ++ 
Sbjct: 101 SQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVD 160

Query: 172 LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
            GFE D ++   +L M+ + G+   A +LFD+MP R++ SW  +ISGY  SGN VEA  +
Sbjct: 161 NGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRL 220

Query: 232 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
              MR E     P T A+++   A  + I  G  +H   +K GL  ++FVS  LI+MY+K
Sbjct: 221 FILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSK 280

Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
            G +  A  VFD+M ++ +V WNSIIA Y        A   +  M+ +G++ D  T   +
Sbjct: 281 CGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSII 340

Query: 352 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
             I ++L     ++ VH  ++R G F  DV+   A+VD Y+K G ++ A  VF+ +  ++
Sbjct: 341 IRICSRLASVARAKQVHASLVRNG-FGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRN 399

Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
           +ISWN LI GY  +G   EAI++F+ M     + PN  T++++L A S  G   +G +I 
Sbjct: 400 IISWNALIAGYGNHGHGEEAIDMFEKMLR-EGMMPNHVTFLAVLSACSISGLFERGWEIF 458

Query: 472 ARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 529
             + ++  +        C++++ G+ G +D+A +L  + P + ++  W A++    +HG 
Sbjct: 459 QSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGN 518

Query: 530 GDKALNFFRQMLDEGVRPDHIT-FVSLLTACSHSGLVSEGQRYFHMMQEE 578
            +  L  F      G+ P+ ++ ++ LL   + SG + E    F  ++ +
Sbjct: 519 LE--LGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRK 566



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 211/448 (47%), Gaps = 50/448 (11%)

Query: 50  FDDLFQSCTKLHH---VKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           +D L  +C  L     VKRL   +V +G     +   +++  +   G +  +   FD + 
Sbjct: 135 YDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMP 194

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFY-----TFPPVLKACRNL-- 159
            RN  +W ++IS YV  G   EA      F L   +R +FY     TF  +++A   L  
Sbjct: 195 ARNAVSWGTIISGYVDSGNYVEA------FRLFILMREEFYDCGPRTFATMIRASAGLEI 248

Query: 160 -VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
              G+++H   +K G   D+FV+ +L+ MY + G    A  +FD+MP +    WN++I+G
Sbjct: 249 IFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAG 308

Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
           Y   G + EALD+  EMR  GV MD  T + I+ +C+R  ++     +H  +V++G   +
Sbjct: 309 YALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLD 368

Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
           +  +  L++ Y+K+G +  A  VFD+M  R+++SWN++IA Y        A   F  M +
Sbjct: 369 VVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLR 428

Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN-----------AV 387
            G+ P+ +T +++ S            S+ G +  RGW +   +  +            +
Sbjct: 429 EGMMPNHVTFLAVLSAC----------SISG-LFERGWEIFQSMTRDHKVKPRAMHFACM 477

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVIS-WNTLITGYAQNG---LASEAIEVFQMMEECNE 443
           +++  + G+++ A A+    P +   + W  L+     +G   L   A E    ME    
Sbjct: 478 IELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGME---- 533

Query: 444 INPNQ-GTYVSILPAYSHVGALRQGIKI 470
             P +   Y+ +L  Y+  G L++   +
Sbjct: 534 --PEKLSNYIVLLNIYNSSGKLKEAADV 559


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/527 (40%), Positives = 322/527 (61%), Gaps = 7/527 (1%)

Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ----AGIQPDLLTLVSLTS 353
           A  +FD+M  RD  SW++I++A+ +   P  A   +  M +    AG+  +     +L +
Sbjct: 112 ARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAA 171

Query: 354 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
             A        R +H  ++RRG    D ++ +A+ DMYAK G ++ A +VF+ +PV+DV+
Sbjct: 172 ATAARCAR-AGRELHCHVVRRG-IDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVV 229

Query: 414 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 473
           SW  ++  Y       E   +F  M     I PN+ TY  +L A +   + + G ++H R
Sbjct: 230 SWTAMVERYFDARRDGEGFRLFVRMLRSG-IQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 474 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 533
           + K+      F  + LV MY K G +  A+ +F  +P+   V W A+IS +  +GQ D+A
Sbjct: 289 MTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEA 348

Query: 534 LNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVD 593
           L +F  +L  G RPDH+TFV +L+AC+H+GLV +G   FH +++E+GI+    HY C++D
Sbjct: 349 LRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVID 408

Query: 594 LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
           L  R+G    A   I  M V+P+  +W +LLG CRIH N+ L   A++ LFE++ EN   
Sbjct: 409 LLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPAT 468

Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
           YV ++NIYA+VG ++ V+  R +   +G+ K P  S IEV  ++ +F  G++ HP+ E++
Sbjct: 469 YVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQV 528

Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
           Y  L+ L  KM+  GYV D  FVL DVE+++K+  +  HSERLA+AFGII++P  +PI++
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKV 588

Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           FKNLR+CGDCH   K IS+I +REIIVRDSNRFHHFK+G CSC DYW
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 178/378 (47%), Gaps = 16/378 (4%)

Query: 95  LSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTL---TSGLRPDFYTFPP 151
           L+ +R  FD +  R+ ++W++++S + R G+   A+  + +      ++G+  +F     
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168

Query: 152 VLKACRNLVD--GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
           +  A        G+++HC V++ G + D  V ++L  MY + G  + AR +FD MPVRD 
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDV 228

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
            SW AM+  Y  +    E   +   M   G+  +  T A +L  CA   +   G  +H  
Sbjct: 229 VSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           + K     + F  + L++MY+K+G M  A+RVF  M + D+VSW ++I+ Y Q+  P  A
Sbjct: 289 MTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEA 348

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
             +F  + ++G +PD +T V + S  A         S+   I               V+D
Sbjct: 349 LRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVID 408

Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEIN 445
           + ++ G+   A  +   + VK +   W +L+ G   +    LA  A E         EI 
Sbjct: 409 LLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEAL------FEIE 462

Query: 446 P-NQGTYVSILPAYSHVG 462
           P N  TYV++   Y+ VG
Sbjct: 463 PENPATYVTLANIYASVG 480



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 12/313 (3%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           + LH  +V  G        + L + YA  G +  +R  FD +  R+V +W +M+  Y   
Sbjct: 182 RELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDA 241

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
            R  E    F +  L SG++P+ +T+  VL+AC        GK++H  + K       F 
Sbjct: 242 RRDGEGFRLFVRM-LRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFA 300

Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
            ++L+HMY ++G    A ++F  MP  D  SW AMISGY Q+G   EAL   D +   G 
Sbjct: 301 ESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGC 360

Query: 241 SMDPITVASILPVCARSDNILSGLLI-HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
             D +T   +L  CA +  +  GL I H    ++G+E        +I++ ++ G+   A 
Sbjct: 361 RPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAE 420

Query: 300 RVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD----LLTLVSLTSI 354
            + + M ++ +   W S++       +   A      + +  I+P+     +TL ++ + 
Sbjct: 421 EMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFE--IEPENPATYVTLANIYAS 478

Query: 355 VAQLNDCRNSRSV 367
           V   ++  N+R +
Sbjct: 479 VGLFDEVENTRRI 491


>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera]
 gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/574 (37%), Positives = 343/574 (59%), Gaps = 6/574 (1%)

Query: 249 SILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA--KFGMMRHALRVFDQMM 306
           S+L  C+  +        H  I+K GL  + F ++NL+   A   +G M +A  +F QM 
Sbjct: 36  SLLKKCSNMEEFKQS---HARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMD 92

Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
           E     +N+++  + +  +   A   +  M + G++PD  T  +L    A+L        
Sbjct: 93  ELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQ 152

Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
           VH  I++ G    DV + N+++ MY K G I   CAVFE +  + V SW+ LIT +A  G
Sbjct: 153 VHAHILKLG-LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLG 211

Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
           + S+ + +   M         +   VS+L A +H+GAL  G  +H  +++N    +V V 
Sbjct: 212 MWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVE 271

Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
           T L++MY KCG +   M LF ++ + + + ++ +IS   +HG G + L  F +ML++G+ 
Sbjct: 272 TSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE 331

Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
           PD I +V +L ACSH+GLV EG + F+ M+ E GI+P ++HYGCMVDL GRAG +  A  
Sbjct: 332 PDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALE 391

Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
            I++MP+ P+  +W +LL A ++H N++ G +A+ +LF++DS+    YV++SN+YA   +
Sbjct: 392 LIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQR 451

Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
           WE V + R+    +GL + PG+S +EV  K+  F + +  HP+ E +Y+ L  +  ++K 
Sbjct: 452 WEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKF 511

Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
            GY PD + VL DV+E+EK+  L+ HS++LAIA+ +I +   SPI+I +NLR+C DCH +
Sbjct: 512 EGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTY 571

Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           TK IS I +REI VRD +RFHHFKDG CSC DYW
Sbjct: 572 TKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 201/381 (52%), Gaps = 7/381 (1%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHM--YCRFGLANVARKLFDDMPVRDS 209
           +LK C N+ + K+ H  +LKLG   D F A++L+       +G  + A  +F  M    S
Sbjct: 37  LLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGS 96

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
             +N M+ G+ +  N  EAL    EM   GV  D  T  ++L  CAR   +  G+ +H +
Sbjct: 97  FQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAH 156

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
           I+K GLE ++FV N+LI+MY K G +     VF+QM ER V SW+++I A+         
Sbjct: 157 ILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDC 216

Query: 330 HGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
                 M   G  + +   LVS+ S    L      RSVHGF++R    + +VI+  +++
Sbjct: 217 LRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGL-NVIVETSLI 275

Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
           +MY K G +     +F+ +  K+ +S++ +I+G A +G   E + +F  M E   + P+ 
Sbjct: 276 EMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLE-QGLEPDD 334

Query: 449 GTYVSILPAYSHVGALRQGIKIHARV-IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             YV +L A SH G +++G++   R+ +++ +   +    C+VD+ G+ G+ID+A+ L  
Sbjct: 335 IVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIK 394

Query: 508 QVP-RSSSVPWNAIISCHGIH 527
            +P   + V W +++S   +H
Sbjct: 395 SMPMEPNDVLWRSLLSASKVH 415



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 194/402 (48%), Gaps = 23/402 (5%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNV 110
           L + C+ +   K+ HA ++  G     F ++ LV   A  + G + ++   F  +     
Sbjct: 37  LLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGS 96

Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHC 167
           + +N+M+  +V+     EA+   Y+     G++PD +T+P +LKAC  L    +G ++H 
Sbjct: 97  FQFNTMMRGHVKDMNTEEAL-ITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHA 155

Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
            +LKLG E DVFV  SL+ MY + G   V   +F+ M  R   SW+A+I+ +   G   +
Sbjct: 156 HILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSD 215

Query: 228 ALDILDEMRLEGV-SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
            L +L +M  EG    +   + S+L  C     +  G  +H +++++    N+ V  +LI
Sbjct: 216 CLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLI 275

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
            MY K G +   + +F +M +++ +S++ +I+              FT M + G++PD +
Sbjct: 276 EMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDI 335

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFI-----MRRGWFMEDVIIG-NAVVDMYAKLGIINSA 400
             V +      LN C ++  V   +     M+    +E  I     +VD+  + G I+ A
Sbjct: 336 VYVGV------LNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEA 389

Query: 401 CAVFEGLPVK--DVISWNTLITG-YAQNGLASEAIEVFQMME 439
             + + +P++  DV+ W +L++     N L +  I   Q+ +
Sbjct: 390 LELIKSMPMEPNDVL-WRSLLSASKVHNNLQAGEIAAKQLFK 430


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/645 (37%), Positives = 371/645 (57%), Gaps = 11/645 (1%)

Query: 54  FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           + +   L   K+LHA L+ SG +     S  LV  YA+ G +  +R  FD +  R    +
Sbjct: 31  YGAAQSLTSTKQLHAHLITSGLLSIDIRSV-LVATYAHCGYVHNARKLFDELRQRGTLLY 89

Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVL 170
           N MI +Y+  G   EA+  F +   +    PD YT+P V+KAC  L+    G+ +H   L
Sbjct: 90  NFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTL 149

Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
              F   +FV  SLL MY   G    ARK+FD M  +   SWN MI+GY ++G A  AL 
Sbjct: 150 VSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALV 209

Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
           + ++M   GV +D  +V S+LP C     +  G  +H  +V+  +     VSN L++MYA
Sbjct: 210 VFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVH-GLVEEKVLGKKIVSNALVDMYA 268

Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           K G M  A  VFD M+ERDVVSW S+I  Y  + D  +A   F  MQ  G++P+ +T+  
Sbjct: 269 KCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIAL 328

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           +    A LN+ ++ R +HG++M++  + E V +  +++DMYAK   +  + +VF     K
Sbjct: 329 ILLACASLNNLKDGRCLHGWVMKQRLYSE-VAVETSLIDMYAKCNCLGLSFSVFTRTSRK 387

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
             + WN L++G   N LA+EAI +F+ M+ E  EIN    T  S+LPAY  +  L+    
Sbjct: 388 KTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINA--ATCNSLLPAYGILADLQPVNN 445

Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS--VPWNAIISCHGIH 527
           I++ ++++    ++ VAT L+D+Y KCG ++ A  +F  +P        W+ II+ +G+H
Sbjct: 446 INSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMH 505

Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
           G G+ A++ F+QM+  GV+P+ +TF S+L +CSH+G+V +G   F  M ++    P+  H
Sbjct: 506 GHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDH 565

Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
           Y CMVDL GRAG +  A++ I+ MP  P  ++WGALLGAC +H N+ELG VA+  LFE++
Sbjct: 566 YTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELE 625

Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 692
             N G YVL++ +YA +G+WE  + VR    D GL+K P  S IE
Sbjct: 626 PGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIE 670


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/660 (35%), Positives = 359/660 (54%), Gaps = 73/660 (11%)

Query: 144 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
           P+   F  +L +C   R+    + +H  +L   F  ++F+   L+ +Y +    + ARKL
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 201 FDDMPVR-------------------------------DSGSWNAMISGYCQSGNAVEAL 229
           FD MP R                               D  SWN+M+SG+ Q     E+L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
           +   +M  E   ++  +  S L  CA   ++  G  +H  + K     ++++ + LI+MY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
           +K G +  A  VF  M+ER++V+WNS+I  YEQ+     A   F  M  +G++PD +TL 
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLA 252

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
           S+ S  A L   +    +H  +++   F +D+++GNA+VDMYAK   +N A  VF+ + +
Sbjct: 253 SVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSI 312

Query: 410 KDVIS-------------------------------WNTLITGYAQNGLASEAIEVFQMM 438
           ++V+S                               WN LI GY QNG   EA+ +F+++
Sbjct: 313 RNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLL 372

Query: 439 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF------DVFVATCLVDM 492
           +    I P   T+ ++L A +++  L  G + H  V+K    F      D+FV   L+DM
Sbjct: 373 KR-ESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDM 431

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCG I+D   +F ++     V WNAII  +  +G G +AL  FR+ML  G +PDH+T 
Sbjct: 432 YMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTM 491

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
           + +L ACSH+GLV EG+ YF  M EE G+ P   HY CMVDL GRAG L  A N I+ MP
Sbjct: 492 IGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP 550

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDE 672
           V PDA +WG+LL AC++HGN+E+G  A+++L E+D  N G YVL+SN+YA +G+W  V  
Sbjct: 551 VNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVR 610

Query: 673 VRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
           VR L R +G+ K PG S IEV ++V +F   +++HP  ++IY  L+ LT +MK +GY+PD
Sbjct: 611 VRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPD 670



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 269/553 (48%), Gaps = 75/553 (13%)

Query: 50  FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L  SC +       + +HA ++++     +F   +L++ Y     L  +R  FD + 
Sbjct: 18  FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQF---------TLTSGL--------------- 142
            RN +TWNS+ISV  + G L EA   F            ++ SG                
Sbjct: 78  QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137

Query: 143 --RPDF----YTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
             R DF    Y+F   L AC  L+D   G ++H  V K  +  DV++ ++L+ MY + G 
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGS 197

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
              A ++F  M  R+  +WN++I+ Y Q+G A EAL++   M   G+  D +T+AS++  
Sbjct: 198 VACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSA 257

Query: 254 CARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFD--------- 303
           CA    +  GL IH  +VK +    +L + N L++MYAK   +  A RVFD         
Sbjct: 258 CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVS 317

Query: 304 ----------------------QMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
                                 +M +R+VVSWN++IA Y Q+ +   A   F  +++  I
Sbjct: 318 ETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESI 377

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME-----DVIIGNAVVDMYAKLGI 396
            P   T  +L S  A L D    R  H  ++++G+  +     D+ +GN+++DMY K G 
Sbjct: 378 WPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGS 437

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           I     VFE +  +D +SWN +I GYAQNG  +EA+++F+ M  C E  P+  T + +L 
Sbjct: 438 IEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGE-KPDHVTMIGVLC 496

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 515
           A SH G + +G      + ++ L       TC+VD+ G+ G +++A +L   +P    +V
Sbjct: 497 ACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV 556

Query: 516 PWNAIISCHGIHG 528
            W ++++   +HG
Sbjct: 557 VWGSLLAACKVHG 569


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 233/576 (40%), Positives = 331/576 (57%), Gaps = 5/576 (0%)

Query: 248 ASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME 307
           A+IL  C  S  +  G  +H  ++  G   +  ++  L+++YA  G +  A RVFD+M  
Sbjct: 72  ATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPN 131

Query: 308 R-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG-IQPDLLTLVSLTSIVAQLNDCRNSR 365
           + +V  WN +I AY +      A   +  M   G ++PD  T   +    A L D    R
Sbjct: 132 QGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGR 191

Query: 366 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 425
            VH  +MR  W   DV +   ++DMYAK G ++ A AVF    ++D   WN++I    QN
Sbjct: 192 EVHDRVMRTNW-ATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQN 250

Query: 426 GLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV 485
           G  +EA+ + + M     I P   T VS + A +   AL +G ++H    +        +
Sbjct: 251 GRPAEALTLCRNMA-AEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKL 309

Query: 486 ATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG- 544
            T L+DMY K G +  A  LF Q+     + WNA+I   G+HG  D A   F +M  E  
Sbjct: 310 KTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQ 369

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           V PDHITFV +L+AC+H G+V E +  F +M   + IKP ++HY C+VD+ G +G    A
Sbjct: 370 VMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEA 429

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
            + I+ M V+PD+ IWGALL  C+IH N+EL  +A  +L E++ E+ G YVL+SNIYA  
Sbjct: 430 SDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAES 489

Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
           GKWE    VR L  +RGLKK    S IE+  K   F  G+ +HP+ + IY+EL  L   +
Sbjct: 490 GKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEGLI 549

Query: 725 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 784
              GYVPD + V  +VE+DEK +++  HSERLAIAFG+IS+PP++ + + KNLRVC DCH
Sbjct: 550 SQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCEDCH 609

Query: 785 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
              K ISQI +REII+RD NR+HHF +G CSC D+W
Sbjct: 610 VVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 227/458 (49%), Gaps = 17/458 (3%)

Query: 49  DFDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
           ++  + +SC     V+   +LHA L+VSG       +T+LV+ YA+ G +S +R  FD +
Sbjct: 70  NYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEM 129

Query: 106 SYR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD--- 161
             + NV+ WN +I  Y R G    A++ +        ++PD +T+PPVLKAC  L+D   
Sbjct: 130 PNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSA 189

Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           G+++H  V++  +  DVFV   L+ MY + G  + A  +F+D  +RD+  WN+MI+   Q
Sbjct: 190 GREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQ 249

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +G   EAL +   M  EG++    T+ S +   A +  +  G  +H Y  + G      +
Sbjct: 250 NGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKL 309

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAG 340
             +L++MYAK G +  A  +F+Q++ R+++SWN++I  +        A   F+ M+ +A 
Sbjct: 310 KTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQ 369

Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
           + PD +T V + S        + ++ V   ++        V     +VD+    G    A
Sbjct: 370 VMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEA 429

Query: 401 CAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQM-MEECNEINP-NQGTYVSILPA 457
             V +G+ VK D   W  L+ G   +    + +E+ ++ +++  E+ P + G YV +   
Sbjct: 430 SDVIKGMLVKPDSGIWGALLNGCKIH----KNVELAELALQKLIELEPEDAGNYVLLSNI 485

Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
           Y+  G   +  ++   +    L     +A   +++ GK
Sbjct: 486 YAESGKWEEAARVRKLMTNRGL--KKIIACSWIELKGK 521



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 10/190 (5%)

Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           N   Y +IL +     A+R G ++HAR++ +    D  +AT LVD+Y  CG +  A  +F
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 507 YQVPRSSSV-PWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGL 564
            ++P   +V  WN +I  +   G  + A+  +R ML  G ++PD+ T+  +L AC+    
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 565 VSEGQR-YFHMMQEEFGIKPHLKHYGC--MVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +S G+  +  +M+  +        + C  ++D++ + G +  A     +  +R DA++W 
Sbjct: 187 LSAGREVHDRVMRTNWATDV----FVCTGLIDMYAKCGCMDEAWAVFNDTTIR-DAAVWN 241

Query: 622 ALLGACRIHG 631
           +++ AC  +G
Sbjct: 242 SMIAACGQNG 251


>gi|302802806|ref|XP_002983157.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
 gi|300149310|gb|EFJ15966.1| hypothetical protein SELMODRAFT_117419 [Selaginella moellendorffii]
          Length = 704

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 252/740 (34%), Positives = 395/740 (53%), Gaps = 41/740 (5%)

Query: 86  VNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD 145
           +  Y+  GDL  ++  FD I   NV +WNS+I+ + + G +S A + F +    S    +
Sbjct: 1   MQVYSENGDLGSAKAIFDQIPSHNVVSWNSLIAGFSQHGFMSNADEIFARMPRWSSSSWN 60

Query: 146 F----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK-L 200
                Y     L     + D    H  +      W+  +       Y    +   A+  +
Sbjct: 61  SMITGYAQSGDLAGATAMFDRTPEHNVI-----SWNALITG-----YSDNRMIPEAKGVI 110

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           FD+MP R+  SWNA++S Y Q+G+   A    + M       D +   +++ V  ++  +
Sbjct: 111 FDEMPRREEVSWNALLSAYAQAGHVHLARSTFERMPRH----DVVAWTALIAVSGQNGQL 166

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
               +++  I     E +L     LI  Y   G +  + RV+  M ER+ VS  ++I AY
Sbjct: 167 EEAEVLYDLIP----ERDLVAWTALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAY 222

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q+ + + A     T+      PD  T  S+    AQ    +++R +   I        D
Sbjct: 223 SQNGEVVQARKMLDTLPD----PDQSTRTSMIVAYAQNGYIKDAREMFDSIKN-----PD 273

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
           VI  NA+++ Y+   +++ A A+F+ +  K ++SWNT++  YAQ G   EA  +F  +  
Sbjct: 274 VIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPH 333

Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
            N ++ N      ++ AY+H   L +  +I   + +     D    T +V M  + GR+ 
Sbjct: 334 KNVVSHN-----VMVVAYAHNMDLAEARRIFYSMDEK----DTVTWTAMVAMLAQHGRLA 384

Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
           +A  LF ++P  + V WN++I+     G G  A+ +   M +EG +PDHITF+ +L ACS
Sbjct: 385 EAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIACS 444

Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
           H GLV EG  +F  MQ + G+ P  +HY  MVD+ GRAG LG A   ++ MP  PD   W
Sbjct: 445 HVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAW 504

Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
           G+LLG+C+ H +++LG  A++ L + D ++ G YVL++N+Y++VG+      VR+  + R
Sbjct: 505 GSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGPYVLLANMYSSVGRVADALAVRNRMKAR 564

Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           G+KK PG S I V+  +  F  G  +HP++++I  EL  L   MK  GY PD   VL  V
Sbjct: 565 GVKKQPGVSLIRVDGVLHRFVAGEASHPRHQEILSELSRLQELMKKAGYQPDTKAVLHSV 624

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
            ++EKE +L+ HSE+LAIAF  I+  P +PI+I KNLRVC DCH  TKF+S++ +REIIV
Sbjct: 625 LDEEKEVLLSYHSEKLAIAFASIACEPGTPIRIMKNLRVCSDCHTATKFLSKLLQREIIV 684

Query: 801 RDSNRFHHFKDGICSCGDYW 820
           RD  RFH+F++G CSCGDYW
Sbjct: 685 RDGYRFHNFENGTCSCGDYW 704



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 206/494 (41%), Gaps = 66/494 (13%)

Query: 81  SSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS 140
           S   L++ YA  G +  +R TF+ +   +V  W ++I+V  + G+L EA           
Sbjct: 121 SWNALLSAYAQAGHVHLARSTFERMPRHDVVAWTALIAVSGQNGQLEEA----------- 169

Query: 141 GLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
                 Y   P                       E D+    +L+  Y   G    ++++
Sbjct: 170 ---EVLYDLIP-----------------------ERDLVAWTALIQAYGVNGQLTESKRV 203

Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
           +  MP R+  S  AMI  Y Q+G  V+A  +LD +       D  T  S++   A++  I
Sbjct: 204 YALMPERNRVSHTAMIIAYSQNGEVVQARKMLDTLP----DPDQSTRTSMIVAYAQNGYI 259

Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
                +   I       ++   N ++  Y+   M+ HA  +FD + ++ +VSWN+++AAY
Sbjct: 260 KDAREMFDSIKNP----DVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAY 315

Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
            Q+ +   A   F ++    +    + +V+     A   D   +R +   +  +     D
Sbjct: 316 AQAGNLDEAKSIFDSIPHKNVVSHNVMVVAY----AHNMDLAEARRIFYSMDEK-----D 366

Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
            +   A+V M A+ G +  A  +F  +P ++V+SWN+LI G A  G    A+    +M  
Sbjct: 367 TVTWTAMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMR- 425

Query: 441 CNE-INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC-LVDMYGKCGR 498
            NE   P+  T++ IL A SHVG + +G      +  +          C +VD+ G+ G+
Sbjct: 426 -NEGAKPDHITFMGILIACSHVGLVEEGWTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQ 484

Query: 499 IDDAMSLFYQVPRSSSV-PWNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVS 554
           +  A  L   +P    V  W +++     H     G +A     Q  D+   P    +V 
Sbjct: 485 LGAARELLETMPFIPDVGAWGSLLGSCKTHSDVKLGTRAAESLLQFDDQSSGP----YVL 540

Query: 555 LLTACSHSGLVSEG 568
           L    S  G V++ 
Sbjct: 541 LANMYSSVGRVADA 554



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 173/410 (42%), Gaps = 51/410 (12%)

Query: 83  TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
           T L+  Y   G L+ S+  +  +  RN  +  +MI  Y + G + +A     +  L +  
Sbjct: 185 TALIQAYGVNGQLTESKRVYALMPERNRVSHTAMIIAYSQNGEVVQA-----RKMLDTLP 239

Query: 143 RPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
            PD  T   ++ A      + D +++  S+       DV    +++  Y    + + A+ 
Sbjct: 240 DPDQSTRTSMIVAYAQNGYIKDAREMFDSIKNP----DVIACNAMMEAYSSAQMLDHAKA 295

Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
           +FD +  +   SWN M++ Y Q+GN  EA  I D +  + V      V+  + V A + N
Sbjct: 296 MFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFDSIPHKNV------VSHNVMVVAYAHN 349

Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
           +   L     I     E +      ++ M A+ G +  A  +F +M  R+VVSWNS+IA 
Sbjct: 350 M--DLAEARRIFYSMDEKDTVTWTAMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAG 407

Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
                  + A  +   M+  G +PD +T + +      L  C      H  ++  GW   
Sbjct: 408 MASCGHGMAAVRYLYVMRNEGAKPDHITFMGI------LIACS-----HVGLVEEGWTHF 456

Query: 380 DVIIGN-----------AVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITG---YAQ 424
             + G+            +VD+  + G + +A  + E +P + DV +W +L+     ++ 
Sbjct: 457 TSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLLGSCKTHSD 516

Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
             L + A E     ++      + G YV +   YS VG +   + +  R+
Sbjct: 517 VKLGTRAAESLLQFDD-----QSSGPYVLLANMYSSVGRVADALAVRNRM 561



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 10/254 (3%)

Query: 75  KIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFY 134
           K   V +   ++  Y++   L  ++  FD I  + + +WN+M++ Y + G L EA   F 
Sbjct: 270 KNPDVIACNAMMEAYSSAQMLDHAKAMFDSIKQKTLVSWNTMVAAYAQAGNLDEAKSIFD 329

Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
                + +  +            +L + ++I  S+     E D     +++ M  + G  
Sbjct: 330 SIPHKNVVSHNVMVV--AYAHNMDLAEARRIFYSM----DEKDTVTWTAMVAMLAQHGRL 383

Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 254
             A++LF  MP R+  SWN++I+G    G+ + A+  L  MR EG   D IT   IL  C
Sbjct: 384 AEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLYVMRNEGAKPDHITFMGILIAC 443

Query: 255 ARSDNILSGLLIHLYIVK--HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDVV 311
           +    +  G   H   ++  HGL         ++++  + G +  A  + + M    DV 
Sbjct: 444 SHVGLVEEG-WTHFTSMQGDHGLIPWREHYCRMVDVLGRAGQLGAARELLETMPFIPDVG 502

Query: 312 SWNSIIAAYEQSND 325
           +W S++ + +  +D
Sbjct: 503 AWGSLLGSCKTHSD 516



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 27/166 (16%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           K   + T +V   A  G L+ ++  F  + YRNV +WNS+I+    CG    AV   Y  
Sbjct: 365 KDTVTWTAMVAMLAQHGRLAEAQELFAKMPYRNVVSWNSLIAGMASCGHGMAAVRYLY-V 423

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLH-------MYC 189
               G +PD  TF  +L AC         H  +++ G  W  F +    H        YC
Sbjct: 424 MRNEGAKPDHITFMGILIACS--------HVGLVEEG--WTHFTSMQGDHGLIPWREHYC 473

Query: 190 RF-------GLANVARKLFDDMP-VRDSGSWNAMISGYCQSGNAVE 227
           R        G    AR+L + MP + D G+W +++ G C++ + V+
Sbjct: 474 RMVDVLGRAGQLGAARELLETMPFIPDVGAWGSLL-GSCKTHSDVK 518


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/558 (39%), Positives = 334/558 (59%), Gaps = 26/558 (4%)

Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
           E N    N L++ Y + GM+  A +VFD+M ER+VVSW ++I  Y Q      A   F  
Sbjct: 22  ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81

Query: 336 MQQAGIQPDLLTLVSLTSIVAQL-NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
           M +  +       VS T ++  L  D R   +   F M     ++DV+    ++D     
Sbjct: 82  MPERNV-------VSWTVMLGGLIEDGRVDEARQLFDMMP---VKDVVASTNMIDGLCSE 131

Query: 395 GIINSACAVFEGLPVKDVISWNTLITG-------------YAQNGLASEAIEVFQMMEEC 441
           G +  A  +F+ +P ++V++W ++I+G             Y + G   EA+ +F +M+  
Sbjct: 132 GRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQR- 190

Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 501
             + P+  + +S+L     + +L  G ++H++++++    D++V++ L+ MY KCG +  
Sbjct: 191 EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVT 250

Query: 502 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 561
           A  +F +      V WN+II+ +  HG G+KAL  F  M    + PD ITF+ +L+ACS+
Sbjct: 251 AKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSY 310

Query: 562 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
           +G V EG   F  M+ ++ + P  +HY CMVDL GRAG L  A N I+NMPV  DA +WG
Sbjct: 311 TGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 370

Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
           ALLGACR H N++L  +A+ +L +++  N G Y+L+SN+Y++  +W+ V E+R   R + 
Sbjct: 371 ALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKN 430

Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRT-HPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
           L+K+PG S IEV+ KV IF  G  T HP++E I  +L  L A ++  GY PD SFV+ DV
Sbjct: 431 LRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDV 490

Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
           +E+EK H L  HSE+LA+A+G++  P   PI++ KNLRVCGD H+  K I+Q+T REII+
Sbjct: 491 DEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIIL 550

Query: 801 RDSNRFHHFKDGICSCGD 818
           RD+NRFHHFKDG+CSC D
Sbjct: 551 RDTNRFHHFKDGLCSCSD 568



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 193/374 (51%), Gaps = 27/374 (7%)

Query: 184 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMD 243
           L+  Y + G+ + ARK+FD MP R+  SW AMI GY Q G   EA  +   M    V   
Sbjct: 31  LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSW 90

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD 303
            + +  ++    R D   +  L  +  VK     ++  S N+I+     G +  A  +FD
Sbjct: 91  TVMLGGLIE-DGRVDE--ARQLFDMMPVK-----DVVASTNMIDGLCSEGRLIEAREIFD 142

Query: 304 QMMERDVVSWNSIIAA-------------YEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
           +M +R+VV+W S+I+              YE+    + A   F+ MQ+ G++P   +++S
Sbjct: 143 EMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVIS 202

Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
           + S+   L    + R VH  ++ R  F  D+ + + ++ MY K G + +A  VF+    K
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLV-RSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSK 261

Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
           D++ WN++I GYAQ+G   +A+EVF  M   + I P++ T++ +L A S+ G +++G++I
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDM-FSSSIAPDEITFIGVLSACSYTGKVKEGLEI 320

Query: 471 HARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
               +K+    D       C+VD+ G+ G++++AM+L   +P  + ++ W A++     H
Sbjct: 321 FES-MKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTH 379

Query: 528 GQGDKALNFFRQML 541
              D A    +++L
Sbjct: 380 KNLDLAEIAAKKLL 393



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 161/358 (44%), Gaps = 38/358 (10%)

Query: 85  LVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF-------- 136
           LV+ Y   G +S +R  FD +  RNV +W +MI  YV+ G + EA   F++         
Sbjct: 31  LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSW 90

Query: 137 -TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 195
             +  GL  D       +   R L D   +           DV  + +++   C  G   
Sbjct: 91  TVMLGGLIEDGR-----VDEARQLFDMMPVK----------DVVASTNMIDGLCSEGRLI 135

Query: 196 VARKLFDDMPVR-------------DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
            AR++FD+MP R             D G+W+ MI  Y + G  +EAL +   M+ EGV  
Sbjct: 136 EAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRP 195

Query: 243 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 302
              +V S+L VC    ++  G  +H  +V+   + +++VS+ LI MY K G +  A RVF
Sbjct: 196 SFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVF 255

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
           D+   +D+V WNSIIA Y Q      A   F  M  + I PD +T + + S  +     +
Sbjct: 256 DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVK 315

Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI 419
               +   +  +            +VD+  + G +N A  + E +PV+ D I W  L+
Sbjct: 316 EGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 19/262 (7%)

Query: 76  IKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMIS-------------VYVR 122
           +K V +ST +++   + G L  +R  FD +  RNV  W SMIS             +Y R
Sbjct: 115 VKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYER 174

Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
            G   EA+   +      G+RP F +   VL  C +L     G+++H  +++  F+ D++
Sbjct: 175 KGFELEAL-ALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIY 233

Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           V++ L+ MY + G    A+++FD    +D   WN++I+GY Q G   +AL++  +M    
Sbjct: 234 VSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSS 293

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMYAKFGMMRHA 298
           ++ D IT   +L  C+ +  +  GL I   +  K+ ++        ++++  + G +  A
Sbjct: 294 IAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEA 353

Query: 299 LRVFDQM-MERDVVSWNSIIAA 319
           + + + M +E D + W +++ A
Sbjct: 354 MNLIENMPVEADAIVWGALLGA 375



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 49/273 (17%)

Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
           A  +F+ +P  + ISWN L++GY QNG+ SEA +VF  M E N +     ++ +++  Y 
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVV-----SWTAMIRGYV 67

Query: 460 HVGALRQ---------------------GIKIHARVIKNCLCF------DVFVATCLVDM 492
             G + +                     G+    RV +    F      DV  +T ++D 
Sbjct: 68  QEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDG 127

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD-------------KALNFFRQ 539
               GR+ +A  +F ++P+ + V W ++IS     G                +AL  F  
Sbjct: 128 LCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSL 187

Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEG-QRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           M  EGVRP   + +S+L+ C     +  G Q +  +++ +F I  ++     ++ ++ + 
Sbjct: 188 MQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVS--SVLITMYIKC 245

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
           G L  A         + D  +W +++     HG
Sbjct: 246 GDLVTAKRVFDRFSSK-DIVMWNSIIAGYAQHG 277



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 9/182 (4%)

Query: 56  SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
           S   L H +++H+ LV S     ++ S+ L+  Y   GDL  ++  FD  S +++  WNS
Sbjct: 209 SLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNS 268

Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL 172
           +I+ Y + G   +A++ F+    +S + PD  TF  VL AC     + +G +I  S +K 
Sbjct: 269 IIAGYAQHGFGEKALEVFHDM-FSSSIAPDEITFIGVLSACSYTGKVKEGLEIFES-MKS 326

Query: 173 GFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEAL 229
            ++ D      A ++ +  R G  N A  L ++MPV  D+  W A++ G C++   ++  
Sbjct: 327 KYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL-GACRTHKNLDLA 385

Query: 230 DI 231
           +I
Sbjct: 386 EI 387


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/770 (34%), Positives = 399/770 (51%), Gaps = 38/770 (4%)

Query: 62   HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR----NVYTWNSMI 117
              K +  L+ + G    + S + L++ +A  G++  +  T + +  R     V +WN +I
Sbjct: 267  EAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGII 326

Query: 118  SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGF 174
            S  V+ G L +A+D F +  L     P+  T   +L AC  L     GK IH    K G 
Sbjct: 327  SGCVQNGYLEDALDMFSRM-LWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGI 385

Query: 175  EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 234
              +V+V  S++ MY + G  + A K+F     +++  WN MI+ Y   G   +AL +L  
Sbjct: 386  VGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRS 445

Query: 235  MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
            M+ +G   D IT  +IL   AR+        +   +V+ GL+ N+   N LI+ + + G+
Sbjct: 446  MQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGL 505

Query: 295  MRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 353
               AL+VF  M    D  + N ++                       ++P+ +T+     
Sbjct: 506  SYEALKVFRIMQSPSDGCNPNEVL--------------------NLSMRPNPITITGALP 545

Query: 354  IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 413
              A LN     + +HG+ +R G F  ++ + +A+VDMYAK   ++SA  VF  +  ++ +
Sbjct: 546  ACADLNLWCQGKEIHGYTLRNG-FEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTV 604

Query: 414  SWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 472
            SWN L+ GY  N    EA+++F +M+ E   + P+  T++ + PA   + A+R G  +H 
Sbjct: 605  SWNALMAGYINNKQPEEALKLFLEMLGE--GLQPSSITFMILFPACGDIAAIRFGRGLHG 662

Query: 473  RVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 531
               K  L      + + L+DMY KCG I DA S+F          WNA+IS   +HG   
Sbjct: 663  YAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMAR 722

Query: 532  KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 591
             A   F QM   G+ PDHITFVSLL+AC+  GLV EG +YF+ M+  +G+   L+HY CM
Sbjct: 723  NAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCM 782

Query: 592  VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
            V + G AG L  A +FI+ MP  PDA +W  LL ACR+H N E+G  A+  LFE++ +N 
Sbjct: 783  VGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNA 842

Query: 652  GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 711
              Y+L+SNIY + G W+    +RS  R R L      S + V +    F  G  +HP+ E
Sbjct: 843  TNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELE 902

Query: 712  KIYDELRNLTAKMKSLGYVP-DKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 770
            +I +    L  KM+  GY P D  F   D EE E +     H+E+LAI FGIISS    P
Sbjct: 903  EILETWDXLARKMELSGYFPLDPVF---DDEEKELDPFSCLHTEKLAICFGIISSNXYRP 959

Query: 771  IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
            + + KN+R+C DCH   K IS+I  REI V+D   +HH KDGIC C D W
Sbjct: 960  VHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 278/585 (47%), Gaps = 85/585 (14%)

Query: 64  KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
           K +H  ++       VF    L++FY+N GDL  SR  F  +  R+V +W ++IS Y+  
Sbjct: 203 KMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEE 262

Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAAS 183
           G   EA   F+   L  G++PD  ++                                ++
Sbjct: 263 GLXDEAKHIFHLMQL-DGVKPDLISW--------------------------------SA 289

Query: 184 LLHMYCRFGLANVARKLFDDMPVR----DSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
           LL  + R G  ++A +  ++MP R       SWN +ISG  Q+G   +ALD+   M    
Sbjct: 290 LLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYP 349

Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
              + IT+ASILP C     +  G  IH    KHG+  N++V  ++I+MY+K G   +A 
Sbjct: 350 EDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAE 409

Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
           +VF +   ++   WN +IAAY        A G   +MQ+ G +PD++T  ++ S  A   
Sbjct: 410 KVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHA--- 466

Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
                        R G   +   + + +V M  K                 +V+S+N LI
Sbjct: 467 -------------RNGLKTQAXELLSEMVQMGLK----------------PNVVSFNVLI 497

Query: 420 TGYAQNGLASEAIEVFQMMEE----CN-------EINPNQGTYVSILPAYSHVGALRQGI 468
           +G+ Q+GL+ EA++VF++M+     CN        + PN  T    LPA + +    QG 
Sbjct: 498 SGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGK 557

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           +IH   ++N    ++FV++ LVDMY KC  +D A  +F+++   ++V WNA+++ +  + 
Sbjct: 558 EIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNK 617

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH- 587
           Q ++AL  F +ML EG++P  ITF+ L  AC     +  G R  H    +  +   LK+ 
Sbjct: 618 QPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFG-RGLHGYAAKCQLD-ELKNA 675

Query: 588 -YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
               ++D++ + G +  A +   +  V  D  +W A++ A  +HG
Sbjct: 676 IXSALIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHG 719



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 244/513 (47%), Gaps = 61/513 (11%)

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKL-GFEWDVFVAASLLHMYCR--FGL 193
           TLT+    +      +L  C  L + ++IH  V+KL   +W   +   L+ +YC+  + L
Sbjct: 74  TLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSL 133

Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPV 253
            + ARKL D++P R   ++ A+I  YC+S    E       M  EG+  D   V +IL  
Sbjct: 134 ED-ARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKA 192

Query: 254 CARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSW 313
           C+       G ++H ++++  +E ++FV N LI+ Y+  G +  +  VF  M ERDVVSW
Sbjct: 193 CSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSW 252

Query: 314 NSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMR 373
            ++I+AY +      A   F  MQ  G++PDL++                          
Sbjct: 253 TALISAYMEEGLXDEAKHIFHLMQLDGVKPDLIS-------------------------- 286

Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK----DVISWNTLITGYAQNGLAS 429
             W        +A++  +A+ G I+ A    E +P +     V SWN +I+G  QNG   
Sbjct: 287 --W--------SALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLE 336

Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
           +A+++F  M    E +PN  T  SILPA + + ALR G  IH    K+ +  +V+V   +
Sbjct: 337 DALDMFSRMLWYPE-DPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSV 395

Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
           +DMY KCG  D A  +F +    ++  WN +I+ +   G+ + AL   R M  +G +PD 
Sbjct: 396 IDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDV 455

Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG---------- 599
           IT+ ++L+  + +GL ++       M  + G+KP++  +  ++  F ++G          
Sbjct: 456 ITYNTILSGHARNGLKTQAXELLSEMV-QMGLKPNVVSFNVLISGFQQSGLSYEALKVFR 514

Query: 600 -----HLGMAHNFIQNMPVRPDASIWGALLGAC 627
                  G   N + N+ +RP+       L AC
Sbjct: 515 IMQSPSDGCNPNEVLNLSMRPNPITITGALPAC 547



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 242/529 (45%), Gaps = 53/529 (10%)

Query: 48  IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
           I    +  +CT L  +   K +H +    G +  V+    +++ Y+  G   ++   F  
Sbjct: 355 ITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXK 414

Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRNLVDGK 163
              +N   WN MI+ YV  G++ +A+          G +PD  T+  +L    RN   G 
Sbjct: 415 AENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQ-KDGWKPDVITYNTILSGHARN---GL 470

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGL-ANVARKLFDDMPVRDSGSWNAMISGYCQS 222
           K                A  LL    + GL  NV              S+N +ISG+ QS
Sbjct: 471 KTQ--------------AXELLSEMVQMGLKPNVV-------------SFNVLISGFQQS 503

Query: 223 GNAVEALDILDEMR----------LEGVSM--DPITVASILPVCARSDNILSGLLIHLYI 270
           G + EAL +   M+          +  +SM  +PIT+   LP CA  +    G  IH Y 
Sbjct: 504 GLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYT 563

Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
           +++G E N+FVS+ L++MYAK   M  A +VF ++  R+ VSWN+++A Y  +  P  A 
Sbjct: 564 LRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEAL 623

Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
             F  M   G+QP  +T + L      +   R  R +HG+  +         I +A++DM
Sbjct: 624 KLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDM 683

Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 450
           YAK G I  A +VF+    KDV  WN +I+ ++ +G+A  A  VF  ME    I P+  T
Sbjct: 684 YAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLG-IXPDHIT 742

Query: 451 YVSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 509
           +VS+L A +  G + +G K  ++  I   +   +   TC+V + G  G +D+A+    Q+
Sbjct: 743 FVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQM 802

Query: 510 P-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 557
           P    +  W  ++    +H   +      + + +  + PD+ T   LL+
Sbjct: 803 PYPPDACMWATLLQACRVHSNPEIGERAAKALFE--LEPDNATNYMLLS 849



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 12/303 (3%)

Query: 344 DLLTLVSLTSI---VAQLNDCRNS---RSVHGFIMRRGWFMEDVIIGNAVVDMYAK-LGI 396
           D LT  S T I   ++ LN C      R +H  +++         IGN +V +Y K    
Sbjct: 73  DTLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWS 132

Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
           +  A  + + +P + V ++  LI  Y ++    E    F++M     + P++    +IL 
Sbjct: 133 LEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGML-PDKYLVPTILK 191

Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
           A S +   R G  +H  VI+  +  DVFV   L+  Y  CG +  + S+F+ +     V 
Sbjct: 192 ACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVS 251

Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
           W A+IS +   G  D+A + F  M  +GV+PD I++ +LL+  + +G +         M 
Sbjct: 252 WTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMP 311

Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM---PVRPDASIWGALLGACRIHGNM 633
           E  G++P +  +  ++    + G+L  A +    M   P  P+     ++L AC     +
Sbjct: 312 ER-GLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKAL 370

Query: 634 ELG 636
            LG
Sbjct: 371 RLG 373


>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
 gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 603

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/583 (38%), Positives = 346/583 (59%), Gaps = 7/583 (1%)

Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF---GMMRHA 298
           +D +   + + + ++ +++   + I  Y +K  +E   FV+  LIN   +      M +A
Sbjct: 24  IDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYA 82

Query: 299 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
             +F+ M E D+V +NS+   Y +  +P+     F  + + GI PD  T  SL    A  
Sbjct: 83  RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142

Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
                 R +H   M+ G   ++V +   +++MY +   ++SA  VF+ +    V+ +N +
Sbjct: 143 KALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201

Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
           ITGYA+    +EA+ +F+ M+    + PN+ T +S+L + + +G+L  G  IH    K+ 
Sbjct: 202 ITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260

Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
            C  V V T L+DM+ KCG +DDA+S+F ++    +  W+A+I  +  HG+ +K++  F 
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320

Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
           +M  E V+PD ITF+ LL ACSH+G V EG++YF  M  +FGI P +KHYG MVDL  RA
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380

Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
           G+L  A+ FI  +P+ P   +W  LL AC  H N++L    S+R+FE+D  + G YV++S
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440

Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
           N+YA   KWE VD +R + +DR   K PG SSIEVNN V  F++G+       K++  L 
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 500

Query: 719 NLTAKMKSLGYVPDKSFVLQ-DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 777
            +  ++K  GYVPD S V+  ++ + EKE  L  HSE+LAI FG++++PP + I++ KNL
Sbjct: 501 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 560

Query: 778 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           RVC DCHN  K IS I  R++++RD  RFHHF+DG CSCGD+W
Sbjct: 561 RVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 210/430 (48%), Gaps = 17/430 (3%)

Query: 53  LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRN 109
           L   C  L  + ++ A  + S  I+ V    KL+NF         +S++RH F+ +S  +
Sbjct: 35  LISKCNSLRELMQIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPD 93

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
           +  +NSM   Y R     E    F +  L  G+ PD YTFP +LKAC   + L +G+++H
Sbjct: 94  IVIFNSMARGYSRFTNPLEVFSLFVEI-LEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
           C  +KLG + +V+V  +L++MY      + AR +FD +       +NAMI+GY +     
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212

Query: 227 EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 286
           EAL +  EM+ + +  + IT+ S+L  CA   ++  G  IH Y  KH     + V+  LI
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272

Query: 287 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 346
           +M+AK G +  A+ +F++M  +D  +W+++I AY        +   F  M+   +QPD +
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332

Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
           T + L +  +        R     ++ +   +  +    ++VD+ ++ G +  A    + 
Sbjct: 333 TFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDK 392

Query: 407 LPVKDV-ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS------ 459
           LP+    + W  L+   + +     A +V + + E ++   + G YV +   Y+      
Sbjct: 393 LPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDD--SHGGDYVILSNLYARNKKWE 450

Query: 460 HVGALRQGIK 469
           +V +LR+ +K
Sbjct: 451 YVDSLRKVMK 460



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 201/388 (51%), Gaps = 10/388 (2%)

Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA----NVARKLFDDMPVR 207
           ++  C +L +  +I    +K   E DV   A L++ +C         + AR LF+ M   
Sbjct: 35  LISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLIN-FCTESPTESSMSYARHLFEAMSEP 92

Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
           D   +N+M  GY +  N +E   +  E+  +G+  D  T  S+L  CA +  +  G  +H
Sbjct: 93  DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152

Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
              +K GL+ N++V   LINMY +   +  A  VFD+++E  VV +N++I  Y + N P 
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212

Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
            A   F  MQ   ++P+ +TL+S+ S  A L      + +H +  ++  F + V +  A+
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY-AKKHSFCKYVKVNTAL 271

Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           +DM+AK G ++ A ++FE +  KD  +W+ +I  YA +G A +++ +F+ M   N + P+
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-VQPD 330

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
           + T++ +L A SH G + +G K  ++++ K  +   +     +VD+  + G ++DA    
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390

Query: 507 YQVPRS-SSVPWNAIISCHGIHGQGDKA 533
            ++P S + + W  +++    H   D A
Sbjct: 391 DKLPISPTPMLWRILLAACSSHNNLDLA 418



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 9/284 (3%)

Query: 50  FDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C     L   ++LH L +  G    V+    L+N Y    D+  +R  FD I 
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191

Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGK 163
              V  +N+MI+ Y R  R +EA+  F +      L+P+  T   VL +C    +L  GK
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQ-GKYLKPNEITLLSVLSSCALLGSLDLGK 250

Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
            IH    K  F   V V  +L+ M+ + G  + A  +F+ M  +D+ +W+AMI  Y   G
Sbjct: 251 WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHG 310

Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV-KHGLEFNLFVS 282
            A +++ + + MR E V  D IT   +L  C+ +  +  G      +V K G+  ++   
Sbjct: 311 KAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370

Query: 283 NNLINMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND 325
            +++++ ++ G +  A    D++ +    + W  ++AA    N+
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN 414


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/684 (34%), Positives = 393/684 (57%), Gaps = 12/684 (1%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
           F  L ++C KL  ++    LH+LLV  G   T F    LV+ YA   DLS +R  FD   
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244

Query: 107 YR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
            + +   WNS++S Y   G+  E ++ F +  +T G  P+ YT    L AC        G
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLG 303

Query: 163 KKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
           K+IH SVLK      +++V  +L+ MY R G    A ++   M   D  +WN++I GY Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363

Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
           +    EAL+   +M   G   D +++ SI+    R  N+L+G+ +H Y++KHG + NL V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423

Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
            N LI+MY+K  +  +  R F +M ++D++SW ++IA Y Q++  + A   F  + +  +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483

Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
           + D + L S+    + L      + +H  I+R+G    D +I N +VD+Y K   +  A 
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYAT 541

Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
            VFE +  KDV+SW ++I+  A NG  SEA+E+F+ M E   ++ +    + IL A + +
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASL 600

Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
            AL +G +IH  +++   C +  +A  +VDMY  CG +  A ++F ++ R   + + ++I
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660

Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
           + +G+HG G  A+  F +M  E V PDHI+F++LL ACSH+GL+ EG+ +  +M+ E+ +
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720

Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
           +P  +HY C+VD+ GRA  +  A  F++ M   P A +W ALL ACR H   E+G +A+ 
Sbjct: 721 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQ 780

Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
           RL E++ +N G  VL+SN++A  G+W  V++VR+  +  G++K PG S IE++ KV  F 
Sbjct: 781 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFT 840

Query: 702 TGNRTHPKYEKIYDELRNLTAKMK 725
             +++HP+ ++IY++L  +T K++
Sbjct: 841 ARDKSHPESKEIYEKLSEVTRKLE 864



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 183/668 (27%), Positives = 327/668 (48%), Gaps = 29/668 (4%)

Query: 3   RLAPSCKDRRLCKLLPLLQAHRPL---------FSAAANSLQISPDCLENESREIDFDDL 53
           RL  S      C+  P  Q+++P+         F           D  EN S    F  +
Sbjct: 27  RLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYV 86

Query: 54  FQSCTKLHHV---KRLHALLVVS-GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
            + C K   V   ++LH+ +  +    +  F + KLV  Y   G L  +   FD +  R 
Sbjct: 87  LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146

Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
            + WN+MI  YV  G  + A+  ++   +  G+     +FP +LKAC  L D   G ++H
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELH 205

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNA 225
             ++KLG+    F+  +L+ MY +    + AR+LFD    + D+  WN+++S Y  SG +
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265

Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNN 284
           +E L++  EM + G + +  T+ S L  C        G  IH  ++K     + L+V N 
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           LI MY + G M  A R+  QM   DVV+WNS+I  Y Q+     A  FF+ M  AG + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
            +++ S+ +   +L++      +H ++++ GW   ++ +GN ++DMY+K  +       F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
             +  KD+ISW T+I GYAQN    EA+E+F+ + +   +  ++    SIL A S + ++
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSM 503

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
               +IH  +++  L  D  +   LVD+YGKC  +  A  +F  +     V W ++IS  
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKP 583
            ++G   +A+  FR+M++ G+  D +  + +L+A +    +++G+  + +++++ F ++ 
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622

Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
            +     +VD++   G L  A      +  R     + +++ A  +HG    G  A +  
Sbjct: 623 SIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELF 676

Query: 644 FEVDSENV 651
            ++  ENV
Sbjct: 677 DKMRHENV 684


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/538 (41%), Positives = 312/538 (57%), Gaps = 8/538 (1%)

Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
           N L++ +   G +  A RVF  M  RDV SWN++++   ++     A   F  M      
Sbjct: 76  NTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNA- 134

Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
                 VS  ++VA      +  +    + R      D I+  A+V  Y   G +  A  
Sbjct: 135 ------VSWNAMVAARASSGDMGAAEN-LFRNAPEKTDAILWTAMVSGYMDTGNVQKAME 187

Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
            F  +PV++++SWN ++ GY +N  A +A+ VF+ M E   + PN  T  S+L   S++ 
Sbjct: 188 YFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLS 247

Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
           AL  G ++H   +K  L   + V T L+ MY KCG +DDA  LF ++     V WNA+IS
Sbjct: 248 ALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMIS 307

Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
            +  HG G KA+  F +M DEGV PD IT +++LTAC H+GL   G + F  MQE + I+
Sbjct: 308 GYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIE 367

Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
           P + HY CMVDL  RAG L  A N I +MP  P  S +G LL ACR++ N+E    A+ +
Sbjct: 368 PQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARK 427

Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
           L E D +N G YV ++NIYA   +W+ V  VR   +D  + KTPG+S +E+      F +
Sbjct: 428 LIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRS 487

Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
            +R HP+ + I+D+L  L   MK++GY PD  F L DVEE  K  +L  HSE+LAIAFG+
Sbjct: 488 NDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGL 547

Query: 763 ISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
           IS+ P   ++IFKNLR+CGDCHN  K IS+I +REII+RD+ RFHHF+ G CSCGDYW
Sbjct: 548 ISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 173/340 (50%), Gaps = 37/340 (10%)

Query: 187 MYCRFGLANV--ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMD 243
           + C F   ++  A ++F  MPVRD  SWN M+SG  ++G   EA  +   M     VS +
Sbjct: 79  LSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWN 138

Query: 244 PITVASILPVCARSDNILSGLLIHLYIVKHGLE-FNLFVSNNLINMYAKFGMMRHALRVF 302
            +       V AR+ +   G   +L+  ++  E  +  +   +++ Y   G ++ A+  F
Sbjct: 139 AM-------VAARASSGDMGAAENLF--RNAPEKTDAILWTAMVSGYMDTGNVQKAMEYF 189

Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDC 361
             M  R++VSWN+++A Y +++    A   F TM + A +QP+  TL S+    + L+  
Sbjct: 190 RAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSAL 249

Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 421
              R VH + M+       + +G +++ MY K G ++ AC +F+ +  KD+++WN +I+G
Sbjct: 250 GFGRQVHQWCMKLP-LGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISG 308

Query: 422 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCF 481
           YAQ+G   +AI++F+ M++   + P+  T +++L A  H G    GI+          CF
Sbjct: 309 YAQHGGGRKAIKLFEKMKD-EGVVPDWITLLAVLTACIHTGLCDFGIQ----------CF 357

Query: 482 DVFVA-----------TCLVDMYGKCGRIDDAMSLFYQVP 510
           +               +C+VD+  + G ++ A+++ + +P
Sbjct: 358 ETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMP 397



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 192/427 (44%), Gaps = 49/427 (11%)

Query: 72  VSGKIKTVFSSTKLVNFYANL---GDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSE 128
            S ++KT  +   L+  YA     G L+ +R  FD I + +  ++N+++S +  CG +  
Sbjct: 31  ASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDG 90

Query: 129 AVDCFYQF---------TLTSGLRPD---------FYTFPPVLKACRNLVDGKKI---HC 167
           A   F            T+ SGL  +         F   P      RN V    +     
Sbjct: 91  AWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP-----ARNAVSWNAMVAARA 145

Query: 168 SVLKLGFEWDVFVAA----------SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
           S   +G   ++F  A          +++  Y   G    A + F  MPVR+  SWNA+++
Sbjct: 146 SSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVA 205

Query: 218 GYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
           GY ++  A +AL +   M  +  V  +P T++S+L  C+    +  G  +H + +K  L 
Sbjct: 206 GYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLG 265

Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
            ++ V  +L++MY K G +  A ++FD+M  +D+V+WN++I+ Y Q      A   F  M
Sbjct: 266 RSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKM 325

Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF-IMRRGWFMEDVIIG-NAVVDMYAKL 394
           +  G+ PD +TL+++ +       C     +  F  M+  + +E  +   + +VD+  + 
Sbjct: 326 KDEGVVPDWITLLAVLTACIHTGLC--DFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRA 383

Query: 395 GIINSACAVFEGLPVKDVIS-WNTLITG-YAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           G++  A  +   +P +   S + TL+T       L        +++E+  +   N G YV
Sbjct: 384 GLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQ---NAGAYV 440

Query: 453 SILPAYS 459
            +   Y+
Sbjct: 441 QLANIYA 447



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 15/267 (5%)

Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
           D +  N ++  +   G I+ A  VF  +PV+DV SWNT+++G ++NG   EA  +F+ M 
Sbjct: 71  DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130

Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
             N ++ N     +++ A +  G +     +     +     D  + T +V  Y   G +
Sbjct: 131 ARNAVSWN-----AMVAARASSGDMGAAENLFRNAPEKT---DAILWTAMVSGYMDTGNV 182

Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTA 558
             AM  F  +P  + V WNA+++ +  + +   AL  F+ M+++  V+P+  T  S+L  
Sbjct: 183 QKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLG 242

Query: 559 CSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
           CS+   +  G R  H    +  +   +     ++ ++ + G L  A      M  + D  
Sbjct: 243 CSNLSALGFG-RQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTK-DIV 300

Query: 619 IWGALLGACRIHGNMELGAVASDRLFE 645
            W A++     HG    G   + +LFE
Sbjct: 301 AWNAMISGYAQHG----GGRKAIKLFE 323



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 488 CLVDMYGKC---GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
           CL+  Y K    GR+ DA  LF  +P   +V +N ++SCH   G  D A   F  M    
Sbjct: 43  CLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTM---P 99

Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
           VR D  ++ ++++  S +G + E +  F  M     +      +  MV     +G +G A
Sbjct: 100 VR-DVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVS-----WNAMVAARASSGDMGAA 153

Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNME 634
            N  +N P + DA +W A++      GN++
Sbjct: 154 ENLFRNAPEKTDAILWTAMVSGYMDTGNVQ 183



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 30/202 (14%)

Query: 77  KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
           +++   T L++ Y   GDL  +   FD +  +++  WN+MIS Y + G   +A+  F + 
Sbjct: 266 RSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKM 325

Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG------------FEWDVFVAASL 184
               G+ PD+ T   VL AC        IH  +   G             E  V   + +
Sbjct: 326 K-DEGVVPDWITLLAVLTAC--------IHTGLCDFGIQCFETMQEAYNIEPQVDHYSCM 376

Query: 185 LHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP 244
           + + CR GL   A  +   MP     S    +   C+    +E  +      +E    DP
Sbjct: 377 VDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIE---QDP 433

Query: 245 ------ITVASILPVCARSDNI 260
                 + +A+I  V  R D++
Sbjct: 434 QNAGAYVQLANIYAVANRWDDV 455


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/795 (32%), Positives = 414/795 (52%), Gaps = 31/795 (3%)

Query: 41  LENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIK--TVFSSTKL-----VNFYANLG 93
           LE ++++ DF D     + L     + AL  +   I     FS  +L     V  Y   G
Sbjct: 71  LEEQNQKSDFVDPAAYVSLLKQAGDVTALKTIQAHISHSKRFSGDRLLLNCVVEAYGKCG 130

Query: 94  DLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
            +  +R  F  I + NVY+W  +++ Y + G     ++   Q  L  G+ P+  T   V+
Sbjct: 131 CVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLL-GVWPNAVTLATVI 189

Query: 154 KACRNLVD---GKKIHC-SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDS 209
            A   L D    +KIH  +       +DV +  +L+ MY + G    A  +FD    +D 
Sbjct: 190 GAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDL 249

Query: 210 GSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLY 269
              NAMIS Y Q G  V+A+   + ++  G+  + +T A +   CA +       + H+ 
Sbjct: 250 ACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMC 309

Query: 270 IVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA 329
            +   L  ++ V+  L++MY++ G +  A RVFD+M  ++VV+WN +IA Y Q      A
Sbjct: 310 FILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEA 369

Query: 330 HGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVD 389
              + +M+ AG++PD +T V++    +        R +H  ++  G +   + + +A++ 
Sbjct: 370 LQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAG-YDSSLTVLSALIT 428

Query: 390 MYAKLGIINSACAVF-EGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
           MY+  G +  A  VF +G+     VISW  ++T   +NG    A+ +F+ M+    +  N
Sbjct: 429 MYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMD-LEGVKAN 487

Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
             T+VS + A S +GAL +G  I  RVI      DV + T L+++YGKCGR+D A+ +F+
Sbjct: 488 VVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFH 547

Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
            +   + V WN I++    +G+   +    ++M  +G +P+ +T +++L  CSH+GLV++
Sbjct: 548 HLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAK 607

Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
              YF  M     + P  +HYGC+VDL GR+G L     FI + P   D+ +W +LLG+C
Sbjct: 608 AVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSC 667

Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
            IH ++E G  A+ R+  +D +N   YVL+SN++A +G  + V  +  LA +R +KK   
Sbjct: 668 VIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQS 727

Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
            S IEVN  V  F      H   EKI  +LR  + +M+  G+VP     L DV       
Sbjct: 728 RSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVP-----LHDVR------ 776

Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
               H E+LAIAFG ISSPP  P+ + KNLR+C  CH   K I ++T R+I VR+ NR H
Sbjct: 777 --GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKHICKMTGRDISVREGNRVH 834

Query: 808 HFK--DGICSCGDYW 820
           HF+  D  CSCGDYW
Sbjct: 835 HFRPMDASCSCGDYW 849



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 14/322 (4%)

Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
             ++++   + D +   +  S++ Q  D    +++   I     F  D ++ N VV+ Y 
Sbjct: 68  LASLEEQNQKSDFVDPAAYVSLLKQAGDVTALKTIQAHISHSKRFSGDRLLLNCVVEAYG 127

Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
           K G +  A  VF  +   +V SW  L+  YAQNG     +E+ + M+    + PN  T  
Sbjct: 128 KCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLG-VWPNAVTLA 186

Query: 453 SILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
           +++ A S +G   +  KIHAR    C L +DV + T L+DMY KCG I  A  +F Q   
Sbjct: 187 TVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARN 246

Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
                 NA+IS +   G    A++ F ++   G++P+ +T+  L  AC+ +G+ S+  R 
Sbjct: 247 KDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDA-RV 305

Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG------ 625
            HM      ++P +     +V ++ R G L  A      MP + +   W  ++       
Sbjct: 306 AHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGK-NVVTWNVMIAGYAQEG 364

Query: 626 ----ACRIHGNMELGAVASDRL 643
               A +++ +ME   V  D +
Sbjct: 365 YTDEALQLYVSMEAAGVEPDEI 386


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/714 (33%), Positives = 388/714 (54%), Gaps = 15/714 (2%)

Query: 45  SREIDFDD-----LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLS 96
           S E+ FD      + ++C+ L       ++H L+V  G  K V + + L++ YA    L 
Sbjct: 169 SEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLD 228

Query: 97  FSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC 156
            S   F  I  +N   W+++I+  V+       ++ F +     G+      +  V ++C
Sbjct: 229 DSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKV-GIGVSQSIYASVFRSC 287

Query: 157 RNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
             L     G ++H   LK  F  D+ V  + L MY + G    A+++F+ +P      +N
Sbjct: 288 AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYN 347

Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKH 273
           A+I G  ++    EAL     +   G+  + I+++     CA     L G  +H   VK 
Sbjct: 348 AIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKS 407

Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF 333
            L  N+ V+N++++MY K   +  A  +FD+M  RD VSWN++IAA+EQ+ +       F
Sbjct: 408 TLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLF 467

Query: 334 TTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
            +M +  ++PD  T  S+    +      +   +H  I++ G  + D  +G A++DMY K
Sbjct: 468 ASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGL-DSFVGGALIDMYCK 526

Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
            G+I  A  + + +  + ++SWN +I G+     + +A   F  M + + + P+  TY  
Sbjct: 527 CGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMS-VKPDNFTYAI 585

Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
           +L A +++ ++  G +IH ++IK  L  DV++ + LVDMY KCG + D+  +F + P   
Sbjct: 586 VLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKD 645

Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
            V WNA+I  +  HG G++AL +F +M  E VRP+H TFVS+L AC+H G + +G  YF+
Sbjct: 646 FVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFN 705

Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
            M  E+G++P ++HY CM+D+ GR+G +  A   IQ MP   DA IW  LL  C+IHGN+
Sbjct: 706 AMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNI 765

Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
           E+   A++ + +++ E+    +L+SNIYA+ G W  V E+R + R   LKK PG S IEV
Sbjct: 766 EIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEV 825

Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
            ++V  F  GN+THP+YE+IY  L  L  +MK +GY+PD  F++ D E +E E 
Sbjct: 826 KDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDIDFLI-DEESEEYEQ 878



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 175/639 (27%), Positives = 314/639 (49%), Gaps = 44/639 (6%)

Query: 50  FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTF---- 102
           F  + Q C+  + +K   + HA ++VSG I  V+ S  L+  Y     L+++   F    
Sbjct: 46  FSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMS 105

Query: 103 --DHISY-------------------------RNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
             D ISY                         R+V +WNSM+S +++ G   +++D F  
Sbjct: 106 QRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLD 165

Query: 136 FTLTSGLRPDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
              +  +  D  TF  VLKAC  L DG    ++H  ++++GF  DV   ++LL MY +  
Sbjct: 166 MGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCK 225

Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
             + + K+F ++PV++   W+A+I+G  Q+   +  L++  EM+  G+ +     AS+  
Sbjct: 226 RLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFR 285

Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
            CA    +  G  +H + +K     ++ V    ++MYAK G +  A R+F+ + +  +  
Sbjct: 286 SCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQC 345

Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
           +N+II    ++     A  FF  + ++G+  + ++L    S  A +    + R +H   +
Sbjct: 346 YNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSV 405

Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
           +      ++ + N+++DMY K   ++ AC +F+ +  +D +SWN +I  + QNG   E +
Sbjct: 406 KST-LRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETL 464

Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDM 492
            +F  M     + P+Q TY S+L A S   AL  G++IH R+IK+ L  D FV   L+DM
Sbjct: 465 NLFASMLRL-RMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDM 523

Query: 493 YGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITF 552
           Y KCG I++A  +  ++ + + V WNAII+   +    + A +FF +ML   V+PD+ T+
Sbjct: 524 YCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTY 583

Query: 553 VSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMP 612
             +L AC++   V  G++  H    +  +   +     +VD++ + G++  +    +  P
Sbjct: 584 AIVLDACANLASVGLGKQ-IHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP 642

Query: 613 VRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
              D   W A++     HG   LG  A      +  ENV
Sbjct: 643 -NKDFVTWNAMICGYAQHG---LGEEALGYFERMQLENV 677



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 160/611 (26%), Positives = 284/611 (46%), Gaps = 59/611 (9%)

Query: 65  RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
           RL A  ++  K   +F+   +     N   L     TF HI  +    +NS+     + G
Sbjct: 9   RLIASRILYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHI-IQECSDYNSL-----KPG 62

Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVA 181
           + + A        + SG  PD Y    ++K    C +L    K    V +   + DV   
Sbjct: 63  KQAHAR------MIVSGFIPDVYISNCLMKMYLRCSHLNYAYK----VFEKMSQRDVISY 112

Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI-LDEMRLEGV 240
            +++  Y   G  N+A + F D P RD  SWN+M+SG+ Q+G   +++D+ LD  R E V
Sbjct: 113 NTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEV 172

Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
             D  T A +L  C+  ++   G+ +H  IV+ G   ++   + L++MYAK   +  +L+
Sbjct: 173 GFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLK 232

Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
           +F ++  ++ V W++IIA   Q+++ I     F  MQ+ GI        S+    A L+ 
Sbjct: 233 IFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSA 292

Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 420
            +    +H   ++   F  D+ +G A +DMYAK G +  A  +F  LP   +  +N +I 
Sbjct: 293 LKVGTQLHAHALKCD-FGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIV 351

Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
           G  +N    EA++ FQ++ +   +  N+ +      A + +     G ++H+  +K+ L 
Sbjct: 352 GCVRNEKGFEALQFFQLLLKSG-LGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLR 410

Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
            ++ VA  ++DMYGKC  + +A  +F ++ R  +V WNA+I+ H  +G  ++ LN F  M
Sbjct: 411 SNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASM 470

Query: 541 LDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
           L   + PD  T+ S+L ACS    ++ G   +  +++   G+   +   G ++D++ + G
Sbjct: 471 LRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG--GALIDMYCKCG 528

Query: 600 -------------------------------HLGMAHNF---IQNMPVRPDASIWGALLG 625
                                          H   AH+F   +  M V+PD   +  +L 
Sbjct: 529 MIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLD 588

Query: 626 ACRIHGNMELG 636
           AC    ++ LG
Sbjct: 589 ACANLASVGLG 599


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/717 (34%), Positives = 391/717 (54%), Gaps = 14/717 (1%)

Query: 57  CTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
           CT+   +++   LHA ++V+G   +   +  L+N YA     S +   FD I+ ++V +W
Sbjct: 20  CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79

Query: 114 NSMISVYVRCGRLSEAVDC---FYQFTLT-SGLRPDFYTFPPVLKACRNLVD---GKKIH 166
           N +I+ + +    + ++     F Q  +    + P+ +T   V  A   L D   G++ H
Sbjct: 80  NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139

Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
              +K     DVF A+SLL+MYC+ GL   AR LFD+MP R++ SW  MISGY     A 
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199

Query: 227 EALDILDEMRLE--GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
           EA ++   MR E  G + +     S+L        + +G  +H   +K+GL   + V+N 
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANA 259

Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
           L+ MY K G +  AL+ F+    ++ ++W++++  + Q  D   A   F  M Q+G  P 
Sbjct: 260 LVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPS 319

Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
             TLV + +  +        R +HG+ ++ G+ ++  ++ +A+VDMYAK G I  A   F
Sbjct: 320 EFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVL-SALVDMYAKCGSIVDARKGF 378

Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
           E +   DV+ W ++ITGY QNG    A+ ++  M+    I PN  T  S+L A S++ AL
Sbjct: 379 ECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVI-PNDLTMASVLKACSNLAAL 437

Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
            QG ++HA +IK     ++ + + L  MY KCG +DD   +F+++P    + WNA+IS  
Sbjct: 438 DQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGL 497

Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
             +G+G++ L  F +M  EG +PD++TFV+LL+ACSH GLV  G  YF MM +EF I P 
Sbjct: 498 SQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPT 557

Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
           ++HY CMVD+  RAG L  A  FI++  V     +W  LL A + H + +LGA A ++L 
Sbjct: 558 VEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLM 617

Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGN 704
           E+ S     YVL+S+IY  +GKWE V+ VR + + RG+ K PG S IE+ +   +F  G+
Sbjct: 618 ELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGD 677

Query: 705 RTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
             HP+ ++I   L+ LT  MK  GY P    +  +   D+ +    SH  +L   +G
Sbjct: 678 NMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLPPETISDDLKDQEDSHEIQLRFIYG 734



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 211/425 (49%), Gaps = 19/425 (4%)

Query: 235 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
           M L  +S   + V   L  C R   +  G  +H  I+  G   +  ++N+LIN+YAK   
Sbjct: 1   MPLLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSH 60

Query: 295 MRHALRVFDQMMERDVVSWNSIIAAY--EQSNDPI--TAHGFFT-TMQQAGIQPDLLTLV 349
              A  VFD +  +DVVSWN +I A+  +Q++ P     H F    M    I P+  TL 
Sbjct: 61  FSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLT 120

Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
            + +  + L+D R  R  H   ++      DV   +++++MY K G++  A  +F+ +P 
Sbjct: 121 GVFTAASTLSDSRAGRQAHALAVKTAC-SHDVFAASSLLNMYCKTGLVFEARDLFDEMPE 179

Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMME-ECNEINPNQGTYVSILPAYSHVGALRQGI 468
           ++ +SW T+I+GYA   LA EA E+F++M  E    N N+  + S+L A +    +  G 
Sbjct: 180 RNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGR 239

Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
           ++H+  +KN L   V VA  LV MY KCG ++DA+  F      +S+ W+A+++     G
Sbjct: 240 QVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFG 299

Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
             DKAL  F  M   G  P   T V ++ ACS +  + EG R  H    + G +  L   
Sbjct: 300 DSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEG-RQMHGYSLKLGYELQLYVL 358

Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL----------GACRIHGNMELGAV 638
             +VD++ + G +  A    + +  +PD  +W +++          GA  ++G M+LG V
Sbjct: 359 SALVDMYAKCGSIVDARKGFECIQ-QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGV 417

Query: 639 ASDRL 643
             + L
Sbjct: 418 IPNDL 422


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.325    0.139    0.432 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,810,797,455
Number of Sequences: 23463169
Number of extensions: 534344974
Number of successful extensions: 1768119
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9019
Number of HSP's successfully gapped in prelim test: 2878
Number of HSP's that attempted gapping in prelim test: 1504853
Number of HSP's gapped (non-prelim): 68665
length of query: 820
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 669
effective length of database: 8,816,256,848
effective search space: 5898075831312
effective search space used: 5898075831312
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 81 (35.8 bits)