BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003439
(820 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/821 (62%), Positives = 639/821 (77%), Gaps = 10/821 (1%)
Query: 3 RLAPSCKDRRLCKLLPLLQAHRPLFSAAANSLQISPDCLEN--ESREID-FDDLFQSCTK 59
R P+CK R ++L + + FSA+AN+LQ DC +N ES+EID LF+ CT
Sbjct: 10 RQIPTCKGGRFTRVLQSIGSVIREFSASANALQ---DCWKNGNESKEIDDVHTLFRYCTN 66
Query: 60 LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
L K LHA LVVS +I+ V S KLVN Y LG+++ +RHTFDHI R+VY WN MIS
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVF 179
Y R G SE + CF F L+SGL PD+ TFP VLKACR ++DG KIHC LK GF WDV+
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVY 186
Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
VAASL+H+Y R+ AR LFD+MPVRD GSWNAMISGYCQSGNA EAL + + +R
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR--- 243
Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
+MD +TV S+L C + + G+ IH Y +KHGLE LFVSN LI++YA+FG +R
Sbjct: 244 -AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
+VFD+M RD++SWNSII AYE + P+ A F M+ + IQPD LTL+SL SI++QL
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
D R RSV GF +R+GWF+ED+ IGNAVV MYAKLG+++SA AVF LP DVISWNT+I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
+GYAQNG ASEAIE++ +MEE EI NQGT+VS+LPA S GALRQG+K+H R++KN L
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 480 CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN +I+CHG HG G+KA+ F++
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
MLDEGV+PDHITFV+LL+ACSHSGLV EGQ F MMQ ++GI P LKHYGCMVD++GRAG
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSN 659
L A FI++M ++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+VL+SN
Sbjct: 603 QLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSN 662
Query: 660 IYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRN 719
+YA+ GKWEGVDE+RS+A +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y EL
Sbjct: 663 MYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTA 722
Query: 720 LTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRV 779
L AK+K +GYVPD FVLQDVE+DEKEHIL SHSERLAIAF +I++P K+ I+IFKNLRV
Sbjct: 723 LQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRV 782
Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
CGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW
Sbjct: 783 CGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 301/771 (39%), Positives = 460/771 (59%), Gaps = 7/771 (0%)
Query: 53 LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
L + C+ L ++++ L+ +G + F TKLV+ + G + + F+ I +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
+++M+ + + L +A+ F + + P Y F +LK C + + GK+IH +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
+K GF D+F L +MY + N ARK+FD MP RD SWN +++GY Q+G A AL
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
+++ M E + IT+ S+LP + I G IH Y ++ G + + +S L++MY
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
AK G + A ++FD M+ER+VVSWNS+I AY Q+ +P A F M G++P ++++
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
A L D R +H + G +V + N+++ MY K +++A ++F L
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
+ ++SWN +I G+AQNG +A+ F M + P+ TYVS++ A + +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 470 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 529
IH V+++CL +VFV T LVDMY KCG I A +F + WNA+I +G HG
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 530 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 589
G AL F +M ++P+ +TF+S+++ACSHSGLV G + F+MM+E + I+ + HYG
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG 579
Query: 590 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 649
MVDL GRAG L A +FI MPV+P +++GA+LGAC+IH N+ A++RLFE++ +
Sbjct: 580 AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPD 639
Query: 650 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPK 709
+ GY+VL++NIY WE V +VR +GL+KTPG S +E+ N+V F++G+ HP
Sbjct: 640 DGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPD 699
Query: 710 YEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS 769
+KIY L L +K GYVPD + VL VE D KE +L++HSE+LAI+FG++++ +
Sbjct: 700 SKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGT 758
Query: 770 PIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
I + KNLRVC DCHN TK+IS +T REI+VRD RFHHFK+G CSCGDYW
Sbjct: 759 TIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 303/741 (40%), Positives = 441/741 (59%), Gaps = 5/741 (0%)
Query: 83 TKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGL 142
+KL Y N GDL + FD + WN +++ + G S ++ F + ++SG+
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGV 191
Query: 143 RPDFYTFPPVLKA---CRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
D YTF V K+ R++ G+++H +LK GF V SL+ Y + + ARK
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARK 251
Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
+FD+M RD SWN++I+GY +G A + L + +M + G+ +D T+ S+ CA S
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
I G +H VK N L++MY+K G + A VF +M +R VVS+ S+IA
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 320 YEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 379
Y + A F M++ GI PD+ T+ ++ + A+ + VH +I
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF- 430
Query: 380 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
D+ + NA++DMYAK G + A VF + VKD+ISWNT+I GY++N A+EA+ +F ++
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
E +P++ T +LPA + + A +G +IH +++N D VA LVDMY KCG +
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
A LF + V W +I+ +G+HG G +A+ F QM G+ D I+FVSLL AC
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
SHSGLV EG R+F++M+ E I+P ++HY C+VD+ R G L A+ FI+NMP+ PDA+I
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
WGALL CRIH +++L ++++FE++ EN GYYVLM+NIYA KWE V +R
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
RGL+K PG S IE+ +V+IF G+ ++P+ E I LR + A+M GY P + L D
Sbjct: 731 RGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALID 790
Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
EE EKE L HSE+LA+A GIISS I++ KNLRVCGDCH KF+S++T REI+
Sbjct: 791 AEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIV 850
Query: 800 VRDSNRFHHFKDGICSCGDYW 820
+RDSNRFH FKDG CSC +W
Sbjct: 851 LRDSNRFHQFKDGHCSCRGFW 871
Score = 246 bits (628), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 282/553 (50%), Gaps = 19/553 (3%)
Query: 54 FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
F S +H ++LH ++ SG + LV FY + +R FD ++ R+V +W
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW 264
Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
NS+I+ YV G + + F Q L SG+ D T V C R + G+ +H +
Sbjct: 265 NSIINGYVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
K F + +LL MY + G + A+ +F +M R S+ +MI+GY + G A EA+
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
+ +EM EG+S D TV ++L CAR + G +H +I ++ L F++FVSN L++MYA
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFT-TMQQAGIQPDLLTLV 349
K G M+ A VF +M +D++SWN+II Y ++ A F +++ PD T+
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 409
+ A L+ R +HG+IMR G+F D + N++VDMYAK G + A +F+ +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 410 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 469
KD++SW +I GY +G EAI +F M + I ++ ++VS+L A SH G + +G +
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWR 621
Query: 470 IHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
+ C + V C+VDM + G + A +P + W A++ IH
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM--MQEEFGIKPHL 585
A ++ + + P++ + L+ + + +E +++ + +++ G +
Sbjct: 682 HDVKLAEKVAEKVFE--LEPENTGYYVLM-----ANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 586 KHYGCM-VDLFGR 597
K+ GC +++ GR
Sbjct: 735 KNPGCSWIEIKGR 747
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 273/536 (50%), Gaps = 17/536 (3%)
Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---R 157
TFD R+V N+ + + G L AV ++ D T VL+ C +
Sbjct: 56 TFD----RSVTDANTQLRRFCESGNLENAVKLL---CVSGKWDIDPRTLCSVLQLCADSK 108
Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
+L DGK++ + GF D + + L MY G A ++FD++ + + WN +++
Sbjct: 109 SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
+SG+ ++ + +M GV MD T + + + ++ G +H +I+K G
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGE 228
Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
V N+L+ Y K + A +VFD+M ERDV+SWNSII Y + F M
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
+GI+ DL T+VS+ + A R+VH ++ + ED N ++DMY+K G +
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDL 347
Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
+SA AVF + + V+S+ ++I GYA+ GLA EA+++F+ MEE I+P+ T ++L
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNC 406
Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPW 517
+ L +G ++H + +N L FD+FV+ L+DMY KCG + +A +F ++ + W
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466
Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEGQR-YFHMM 575
N II + + ++AL+ F +L+E PD T +L AC+ +G+ + ++M
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
+ + H+ + +VD++ + G L +AH ++ + D W ++ +HG
Sbjct: 527 RNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 303/794 (38%), Positives = 468/794 (58%), Gaps = 26/794 (3%)
Query: 50 FDDLFQSCTKLHHV---KRLHALLVVSG-KIKTVFSSTKLVNFYANLGDLSFSRHTFDHI 105
F L ++ L + K++HA + G + +V + LVN Y GD FD I
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 106 SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL------ 159
S RN +WNS+IS + A++ F + L + P +T V+ AC NL
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
+ GK++H L+ G E + F+ +L+ MY + G ++ L RD +WN ++S
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG-LEFN 278
CQ+ +EAL+ L EM LEGV D T++S+LP C+ + + +G +H Y +K+G L+ N
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
FV + L++MY + RVFD M +R + WN++IA Y Q+ A F M++
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 339 -AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
AG+ + T+ + + ++HGF+++RG D + N ++DMY++LG I
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKI 456
Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE----------INPN 447
+ A +F + +D+++WNT+ITGY + +A+ + M+ + PN
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
T ++ILP+ + + AL +G +IHA IKN L DV V + LVDMY KCG + + +F
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
Q+P+ + + WN II +G+HG G +A++ R M+ +GV+P+ +TF+S+ ACSHSG+V E
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR-PDASIWGALLGA 626
G R F++M+ ++G++P HY C+VDL GRAG + A+ + MP A W +LLGA
Sbjct: 637 GLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
RIH N+E+G +A+ L +++ +YVL++NIY++ G W+ EVR +++G++K P
Sbjct: 697 SRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEP 756
Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
G S IE ++V F G+ +HP+ EK+ L L +M+ GYVPD S VL +VEEDEKE
Sbjct: 757 GCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKE 816
Query: 747 HILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRF 806
+L HSE+LAIAFGI+++ P + I++ KNLRVC DCH TKFIS+I +REII+RD RF
Sbjct: 817 ILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRF 876
Query: 807 HHFKDGICSCGDYW 820
H FK+G CSCGDYW
Sbjct: 877 HRFKNGTCSCGDYW 890
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/538 (28%), Positives = 267/538 (49%), Gaps = 22/538 (4%)
Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
W ++ VR L EAV + + G++PD Y FP +LKA +L D GK+IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 170 LKLGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
K G+ D V VA +L+++Y + G K+FD + R+ SWN++IS C A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 229 LDILDEMRLEGVSMDPITVASILPVCAR---SDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
L+ M E V T+ S++ C+ + ++ G +H Y ++ G E N F+ N L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
+ MY K G + + + RD+V+WN+++++ Q+ + A + M G++PD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
T+ S+ + L R + +H + ++ G E+ +G+A+VDMY + S VF+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
G+ + + WN +I GY+QN EA+ +F MEE + N T ++PA GA
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 466 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 525
+ IH V+K L D FV L+DMY + G+ID AM +F ++ V WN +I+ +
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 526 IHGQGDKALNFFRQM------LDEG-----VRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
+ AL +M + +G ++P+ IT +++L +C+ +++G+ H
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHA 541
Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
+ + + +VD++ + G L M+ +P + + W ++ A +HGN
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust.
Identities = 287/773 (37%), Positives = 455/773 (58%), Gaps = 9/773 (1%)
Query: 52 DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
D F+ T + H+ + HA +++ G + TKL ++LG + ++R F + +V+
Sbjct: 25 DFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVF 84
Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCS 168
+N ++ + ++ F ++ L+P+ T+ + A D G+ IH
Sbjct: 85 LFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
+ G + ++ + ++++ MY +F ARK+FD MP +D+ WN MISGY ++ VE+
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 229 LDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLIN 287
+ + ++ E + +D T+ ILP A + G+ IH K G + +V I+
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFIS 264
Query: 288 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
+Y+K G ++ +F + + D+V++N++I Y + + + F + +G + T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
LVSL + L ++HG+ ++ F+ + A+ +Y+KL I SA +F+
Sbjct: 325 LVSLVPVSGHLMLIY---AIHGYCLKSN-FLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 408 PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 467
P K + SWN +I+GY QNGL +AI +F+ M++ +E +PN T IL A + +GAL G
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLG 439
Query: 468 IKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 527
+H V ++V+T L+ MY KCG I +A LF + + + V WN +IS +G+H
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 528 GQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKH 587
GQG +ALN F +ML+ G+ P +TF+ +L ACSH+GLV EG F+ M +G +P +KH
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 588 YGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVD 647
Y CMVD+ GRAGHL A FI+ M + P +S+W LLGACRIH + L S++LFE+D
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Query: 648 SENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTH 707
+NVGY+VL+SNI++ + VR A+ R L K PG++ IE+ +F +G+++H
Sbjct: 620 PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSH 679
Query: 708 PKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPP 767
P+ ++IY++L L KM+ GY P+ L DVEE+E+E ++ HSERLAIAFG+I++ P
Sbjct: 680 PQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEP 739
Query: 768 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
+ I+I KNLRVC DCH TK IS+ITER I+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 740 GTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 316/846 (37%), Positives = 473/846 (55%), Gaps = 57/846 (6%)
Query: 28 SAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVN 87
+AAA S Q L + S C + VK +H L+ G I T+ ++ L++
Sbjct: 9 NAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFG-ILTLNLTSHLIS 67
Query: 88 FYANLGDLSFSRHTFDHI--SYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR-- 143
Y ++G LS + S VY WNS+I Y G A C Y F L L
Sbjct: 68 TYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY---GDNGCANKCLYLFGLMHSLSWT 124
Query: 144 PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
PD YTFP V KAC + G+ H L GF +VFV +L+ MY R + ARK+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSMDPITVASILPVCARSDN 259
FD+M V D SWN++I Y + G AL++ M E G D IT+ ++LP CA
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAA 319
G +H + V + N+FV N L++MYAK GMM A VF M +DVVSWN+++A
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 320 YEQSNDPITAHGFFTTMQQ-----------------------------------AGIQPD 344
Y Q A F MQ+ +GI+P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFI------MRRGWFMEDVIIGNAVVDMYAKLGIIN 398
+TL+S+ S A + + + +H + +R+ ++ ++ N ++DMYAK ++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 399 SACAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSIL 455
+A A+F+ L K DV++W +I GY+Q+G A++A+E+ +M EE + PN T L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 456 PAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
A + + ALR G +IHA ++N +FV+ CL+DMY KCG I DA +F + +
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
V W ++++ +G+HG G++AL F +M G + D +T + +L ACSHSG++ +G YF+
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
M+ FG+ P +HY C+VDL GRAG L A I+ MP+ P +W A L CRIHG +E
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
LG A++++ E+ S + G Y L+SN+YAN G+W+ V +RSL R +G+KK PG S +E
Sbjct: 665 LGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
F+ G++THP ++IY L + ++K +GYVP+ F L DV+++EK+ +L HSE
Sbjct: 725 KGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSE 784
Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
+LA+A+GI+++P + I+I KNLRVCGDCH ++S+I + +II+RDS+RFHHFK+G C
Sbjct: 785 KLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSC 844
Query: 815 SCGDYW 820
SC YW
Sbjct: 845 SCKGYW 850
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 288/777 (37%), Positives = 438/777 (56%), Gaps = 9/777 (1%)
Query: 50 FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
F + +C K+ ++ +LH L++ G + LV+ Y +LG+L + H F ++S
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGK 163
R+ T+N++I+ +CG +A++ F + L GL PD T ++ AC L G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
++H KLGF + + +LL++Y + A F + V + WN M+ Y
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
+ + I +M++E + + T SIL C R ++ G IH I+K + N +V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
LI+MYAK G + A + + +DVVSW ++IA Y Q N A F M GI+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
D + L + S A L + + +H G F D+ NA+V +Y++ G I +
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
FE D I+WN L++G+ Q+G EA+ VF M I+ N T+ S + A S
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETAN 707
Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
++QG ++HA + K + V L+ MY KCG I DA F +V + V WNAII+
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 524 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
+ HG G +AL+ F QM+ VRP+H+T V +L+ACSH GLV +G YF M E+G+ P
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
+HY C+VD+ RAG L A FIQ MP++PDA +W LL AC +H NME+G A+ L
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHL 887
Query: 644 FEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTG 703
E++ E+ YVL+SN+YA KW+ D R +++G+KK PG S IEV N + FY G
Sbjct: 888 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Query: 704 NRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGII 763
++ HP ++I++ ++LT + +GYV D +L +++ ++K+ I+ HSE+LAI+FG++
Sbjct: 948 DQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL 1007
Query: 764 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
S P PI + KNLRVC DCH W KF+S+++ REIIVRD+ RFHHF+ G CSC DYW
Sbjct: 1008 SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/592 (28%), Positives = 286/592 (48%), Gaps = 17/592 (2%)
Query: 53 LFQSCTK----LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR 108
L + C K L ++LH+ ++ G S KL +FY GDL + FD + R
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR------NLVDG 162
++TWN MI + E F + ++ + P+ TF VL+ACR ++V+
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVE- 207
Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
+IH +L G V L+ +Y R G ++AR++FD + ++D SW AMISG ++
Sbjct: 208 -QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
EA+ + +M + G+ P +S+L C + +++ G +H ++K G + +V
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
N L+++Y G + A +F M +RD V++N++I Q A F M G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
PD TL SL + + +H + + G+ + I G A++++YAK I +A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAKCADIETALD 445
Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
F V++V+ WN ++ Y + +F+ M + EI PNQ TY SIL +G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLG 504
Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
L G +IH+++IK + +V + L+DMY K G++D A + + V W +I+
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
+ + DKAL FRQMLD G+R D + + ++AC+ + EGQ+ H G
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFS 623
Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
L +V L+ R G + ++ + D W AL+ + GN E
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNE 674
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 546 bits (1408), Expect = e-154, Method: Compositional matrix adjust.
Identities = 292/780 (37%), Positives = 447/780 (57%), Gaps = 19/780 (2%)
Query: 51 DDLFQSCTKLHHVKR-------LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
+D+F + +L KR ++++ + S V + + G+L + + F
Sbjct: 94 EDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFG 153
Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
+S RN+++WN ++ Y + G EA+ +++ G++PD YTFP VL+ C + D
Sbjct: 154 KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
GK++H V++ G+E D+ V +L+ MY + G AR LFD MP RD SWNAMISGY
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 221 QSGNAVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 278
++G E L++ MR G+S+DP +T+ S++ C + G IH Y++ G +
Sbjct: 274 ENGMCHEGLELFFAMR--GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
+ V N+L MY G R A ++F +M +D+VSW ++I+ YE + P A + M Q
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
++PD +T+ ++ S A L D +H ++ + VI+ N +++MY+K I+
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCID 450
Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
A +F +P K+VISW ++I G N EA+ + M+ + PN T + L A
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAAC 508
Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
+ +GAL G +IHA V++ + D F+ L+DMY +CGR++ A S F + WN
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWN 567
Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
+++ + GQG + F +M+ VRPD ITF+SLL CS S +V +G YF M E+
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-ED 626
Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
+G+ P+LKHY C+VDL GRAG L AH FIQ MPV PD ++WGALL ACRIH ++LG +
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL 686
Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
++ +FE+D ++VGYY+L+ N+YA+ GKW V +VR + ++ GL G S +EV KV
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746
Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
F + ++ HP+ ++I L KM +G D E ++ I HSER AI
Sbjct: 747 AFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAI 806
Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
AFG+I++ P PI + KNL +C +CH+ KFIS+ REI VRD+ FHHFKDG CSCGD
Sbjct: 807 AFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 13/420 (3%)
Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
+ G C +G EA+ +L+ M+ V++D +++ +C G ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
+ + N + M+ +FG + A VF +M ER++ SWN ++ Y + A +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 336 MQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 394
M G++PD+ T + + D + VH ++R G+ + D+ + NA++ MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL-DIDVVNALITMYVKC 244
Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
G + SA +F+ +P +D+ISWN +I+GY +NG+ E +E+F M + ++P+ T S+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSV 303
Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
+ A +G R G IHA VI D+ V L MY G +A LF ++ R
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
V W +IS + + DKA++ +R M + V+PD IT ++L+AC+ G + G
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL--- 420
Query: 575 MQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 630
+ IK L Y +++++ + + A + N+P R + W +++ R++
Sbjct: 421 --HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 421 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 480
G NG EA+++ M+E + ++ +V+++ A +G K+++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQEL-RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 481 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 540
V + + M+ + G + DA +F ++ + WN ++ + G D+A+ + +M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 541 L-DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
L GV+PD TF +L C ++ G+ H+ +G + + ++ ++ + G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 600 HLGMAHNFIQNMPVRPDASIWGALL------GACRIHGNMEL 635
+ A MP R D W A++ G C H +EL
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMC--HEGLEL 284
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/763 (37%), Positives = 445/763 (58%), Gaps = 13/763 (1%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
++LH + G + V T LV+ Y + R FD + RNV TW ++IS Y R
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRNLVDGK--KIHCSVLKLGFEWDVFV 180
E + F + G +P+ +TF L V G+ ++H V+K G + + V
Sbjct: 173 SMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
+ SL+++Y + G AR LFD V+ +WN+MISGY +G +EAL + MRL V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
+ + AS++ +CA + +H +VK+G F+ + L+ Y+K M ALR
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 301 VFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
+F ++ +VVSW ++I+ + Q++ A F+ M++ G++P+ T S++
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY----SVILTAL 407
Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
+ VH +++ + +G A++D Y KLG + A VF G+ KD+++W+ ++
Sbjct: 408 PVISPSEVHAQVVKTN-YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKIHARVIKNC 478
GYAQ G AI++F + + I PN+ T+ SIL + A + QG + H IK+
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGG-IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
L + V++ L+ MY K G I+ A +F + V WN++IS + HGQ KAL+ F+
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 539 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 598
+M V+ D +TF+ + AC+H+GLV EG++YF +M + I P +H CMVDL+ RA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 599 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 658
G L A I+NMP ++IW +L ACR+H ELG +A++++ + E+ YVL+S
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
Query: 659 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 718
N+YA G W+ +VR L +R +KK PG+S IEV NK F G+R+HP ++IY +L
Sbjct: 706 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 765
Query: 719 NLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLR 778
+L+ ++K LGY PD S+VLQD++++ KE +L HSERLAIAFG+I++P SP+ I KNLR
Sbjct: 766 DLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLR 825
Query: 779 VCGDCHNWTKFISQITEREIIVRDSNRFHHF-KDGICSCGDYW 820
VCGDCH K I++I EREI+VRDSNRFHHF DG+CSCGD+W
Sbjct: 826 VCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 273/554 (49%), Gaps = 25/554 (4%)
Query: 92 LGDLSFSR-----HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDF 146
G +S SR + FD R+ ++ S++ + R GR EA F G+ D
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL-GMEMDC 93
Query: 147 YTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
F VLK L D G+++HC +K GF DV V SL+ Y + RK+FD+
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 204 MPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSG 263
M R+ +W +ISGY ++ E L + M+ EG + T A+ L V A G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQS 323
L +H +VK+GL+ + VSN+LIN+Y K G +R A +FD+ + VV+WNS+I+ Y +
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 324 NDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVII 383
+ A G F +M+ ++ + S+ + A L + R + +H +++ G F+ D I
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG-FLFDQNI 332
Query: 384 GNAVVDMYAKLGIINSACAVFEGLP-VKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 442
A++ Y+K + A +F+ + V +V+SW +I+G+ QN EA+++F M+
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-K 391
Query: 443 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 502
+ PN+ TY IL A + ++HA+V+K V T L+D Y K G++++A
Sbjct: 392 GVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 503 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 562
+F + V W+A+++ + G+ + A+ F ++ G++P+ TF S+L C+ +
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 563 GLVSEGQRYFHMMQEEFGIKPHLKHYGC----MVDLFGRAGHLGMAHNFIQNMPVRPDAS 618
+ FH F IK L C ++ ++ + G++ A + + D
Sbjct: 508 NASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLV 562
Query: 619 IWGALLGACRIHGN 632
W +++ HG
Sbjct: 563 SWNSMISGYAQHGQ 576
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/806 (36%), Positives = 465/806 (57%), Gaps = 41/806 (5%)
Query: 54 FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG---DLSFSRHTFDHI-SYRN 109
++C + +K H L G V + TKLV LG LSF++ F++ SY
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
+ +NS+I Y G +EA+ F + + SG+ PD YTFP L AC R +G +IH
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAV 226
++K+G+ D+FV SL+H Y G + ARK+FD+M R+ SW +MI GY + A
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 227 EALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
+A+D+ M R E V+ + +T+ ++ CA+ +++ +G ++ +I G+E N + + L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
++MY K + A R+FD+ ++ N++ + Y + A G F M +G++PD
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL----------- 394
++++S S +QL + +S HG+++R G+ D I NA++DMY K
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFD 396
Query: 395 --------------------GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
G +++A FE +P K+++SWNT+I+G Q L EAIEV
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
F M+ +N + T +SI A H+GAL I+ + KN + DV + T LVDM+
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 554
+CG + AMS+F + W A I + G ++A+ F M+++G++PD + FV
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 555 LLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVR 614
LTACSH GLV +G+ F+ M + G+ P HYGCMVDL GRAG L A I++MP+
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 615 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 674
P+ IW +LL ACR+ GN+E+ A A++++ + E G YVL+SN+YA+ G+W + +VR
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 675 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 734
+++GL+K PG SSI++ K F +G+ +HP+ I L ++ + LG+VPD S
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 735 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 794
VL DV+E EK +L+ HSE+LA+A+G+ISS + I+I KNLRVC DCH++ KF S++
Sbjct: 757 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 816
Query: 795 EREIIVRDSNRFHHFKDGICSCGDYW 820
REII+RD+NRFH+ + G CSCGD+W
Sbjct: 817 NREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 246/508 (48%), Gaps = 41/508 (8%)
Query: 150 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDMPV 206
P LK C+ + + K H S+ K G + DV L+ C G + A+++F++
Sbjct: 36 PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 207 RDSG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 265
+ +N++I GY SG EA+ + M G+S D T L CA+S +G+
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 325
IH IVK G +LFV N+L++ YA+ G + A +VFD+M ER+VVSW S+I Y + +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 326 PITAHG-FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
A FF ++ + P+ +T+V + S A+L D V+ FI G + D+++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV- 274
Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
+A+VDMY K I+ A +F+ ++ N + + Y + GL EA+ VF +M + +
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-V 333
Query: 445 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 504
P++ + +S + + S + + G H V++N + L+DMY KC R D A
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 505 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD---------------------- 542
+F ++ + V WN+I++ + +G+ D A F M +
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 543 ----------EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 592
EGV D +T +S+ +AC H G + + ++ + E+ GI+ ++ +V
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLV 512
Query: 593 DLFGRAGHLGMAHNFIQNMPVRPDASIW 620
D+F R G A + ++ R D S W
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNR-DVSAW 539
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 205/454 (45%), Gaps = 52/454 (11%)
Query: 53 LFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
+ +C KL ++ +++A + SG + LV+ Y + ++ FD N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
+ N+M S YVR G EA+ F + SG+RPD + + +C RN++ GK H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 167 CSVLKLGFE-WD------------------------------VFVAASLLHMYCRFGLAN 195
VL+ GFE WD V S++ Y G +
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVC 254
A + F+ MP ++ SWN +ISG Q EA+++ M+ EGV+ D +T+ SI C
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 255 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 314
+ I+ YI K+G++ ++ + L++M+++ G A+ +F+ + RDV +W
Sbjct: 481 GHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 540
Query: 315 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGFIMR 373
+ I A + + A F M + G++PD + V + + + + + + +
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 374 RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITGYAQNG---LA 428
G EDV G +VD+ + G++ A + E +P++ DVI WN+L+ G +A
Sbjct: 601 HGVSPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA 658
Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
+ A E Q++ G+YV + Y+ G
Sbjct: 659 AYAAEKIQVLAP-----ERTGSYVLLSNVYASAG 687
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 544 bits (1402), Expect = e-154, Method: Compositional matrix adjust.
Identities = 288/780 (36%), Positives = 466/780 (59%), Gaps = 13/780 (1%)
Query: 50 FDDLFQSCTKLHHVK---RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
F L ++C KL ++ LH+LLV G T F LV+ YA DLS +R FD
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 107 YR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---G 162
+ + WNS++S Y G+ E ++ F + +T G P+ YT L AC G
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLG 303
Query: 163 KKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
K+IH SVLK +++V +L+ MY R G A ++ M D +WN++I GY Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
+ EAL+ +M G D +++ SI+ R N+L+G+ +H Y++KHG + NL V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
N LI+MY+K + + R F +M ++D++SW ++IA Y Q++ + A F + + +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 342 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSAC 401
+ D + L S+ + L + +H I+R+G D +I N +VD+Y K + A
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYAT 541
Query: 402 AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHV 461
VFE + KDV+SW ++I+ A NG SEA+E+F+ M E ++ + + IL A + +
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASL 600
Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
AL +G +IH +++ C + +A +VDMY CG + A ++F ++ R + + ++I
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
+ +G+HG G A+ F +M E V PDHI+F++LL ACSH+GL+ EG+ + +M+ E+ +
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYEL 720
Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
+P +HY C+VD+ GRA + A F++ M P A +W ALL ACR H E+G +A+
Sbjct: 721 EPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQ 780
Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
RL E++ +N G VL+SN++A G+W V++VR+ + G++K PG S IE++ KV F
Sbjct: 781 RLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFT 840
Query: 702 TGNRTHPKYEKIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAF 760
+++HP+ ++IY++L +T K+ + +GYV D FVL +V+E EK +L HSER+AIA+
Sbjct: 841 ARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAY 900
Query: 761 GIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
G++ +P ++ ++I KNLRVC DCH + K +S++ R+I++RD+NRFHHF+ G+CSCGD W
Sbjct: 901 GLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/668 (27%), Positives = 327/668 (48%), Gaps = 29/668 (4%)
Query: 3 RLAPSCKDRRLCKLLPLLQAHRPL---------FSAAANSLQISPDCLENESREIDFDDL 53
RL S C+ P Q+++P+ F D EN S F +
Sbjct: 27 RLHCSIPTEPSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYV 86
Query: 54 FQSCTKLHHV---KRLHALLVVS-GKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
+ C K V ++LH+ + + + F + KLV Y G L + FD + R
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
+ WN+MI YV G + A+ ++ + G+ +FP +LKAC L D G ++H
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNA 225
++KLG+ F+ +L+ MY + + AR+LFD + D+ WN+++S Y SG +
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNN 284
+E L++ EM + G + + T+ S L C G IH ++K + L+V N
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
LI MY + G M A R+ QM DVV+WNS+I Y Q+ A FF+ M AG + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
+++ S+ + +L++ +H ++++ GW ++ +GN ++DMY+K + F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
+ KD+ISW T+I GYAQN EA+E+F+ + + + ++ SIL A S + ++
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSM 503
Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
+IH +++ L D + LVD+YGKC + A +F + V W ++IS
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKP 583
++G +A+ FR+M++ G+ D + + +L+A + +++G+ + +++++ F ++
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622
Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRL 643
+ +VD++ G L A + R + +++ A +HG G A +
Sbjct: 623 SIA--VAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELF 676
Query: 644 FEVDSENV 651
++ ENV
Sbjct: 677 DKMRHENV 684
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 543 bits (1400), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/753 (37%), Positives = 428/753 (56%), Gaps = 13/753 (1%)
Query: 77 KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
K S+ +++ + GD+S +R FD + R V TW ++ Y R EA F Q
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 137 TLTSGLR-PDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFEWDVFVAAS--LLHMYCR 190
+S PD TF +L C + V ++H +KLGF+ + F+ S LL YC
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
++A LF+++P +DS ++N +I+GY + G E++ + +MR G T + +
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
L + G +H V G + V N +++ Y+K + +FD+M E D
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
VS+N +I++Y Q++ + FF MQ G ++ SI A L+ + R +H
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 371 IMRRGWFMEDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
+ D I +GN++VDMYAK + A +F+ LP + +SW LI+GY Q GL
Sbjct: 377 AL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLH 433
Query: 429 SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
+++F M N + +Q T+ ++L A + +L G ++HA +I++ +VF +
Sbjct: 434 GAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
LVDMY KCG I DA+ +F ++P ++V WNA+IS H +G G+ A+ F +M++ G++PD
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
++ + +LTACSH G V +G YF M +GI P KHY CM+DL GR G A +
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-ENVGYYVLMSNIYANVGKW 667
MP PD +W ++L ACRIH N L A+++LF ++ + YV MSNIYA G+W
Sbjct: 613 DEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEW 672
Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
E V +V+ R+RG+KK P +S +EVN+K+ +F + ++THP ++I ++ LTA+++
Sbjct: 673 EKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
GY PD S V+QDV+E K L HSERLA+AF +IS+P PI + KNLR C DCH
Sbjct: 733 GYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAI 792
Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
K IS+I +REI VRD++RFHHF +G+CSCGDYW
Sbjct: 793 KLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 246/526 (46%), Gaps = 45/526 (8%)
Query: 158 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
+D +++ ++K GF+ D + ++ R G + ARK++D+MP +++ S N MIS
Sbjct: 28 TFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMIS 87
Query: 218 GYCQSGNAVEALDILDEMRLEGVSM---------------------------------DP 244
G+ ++G+ A D+ D M V D
Sbjct: 88 GHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH 147
Query: 245 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF--VSNNLINMYAKFGMMRHALRVF 302
+T ++LP C + + +H + VK G + N F VSN L+ Y + + A +F
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 303 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
+++ E+D V++N++I YE+ + F M+Q+G QP T + V L+D
Sbjct: 208 EEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 363 NSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGY 422
+ +H + G F D +GN ++D Y+K + +F+ +P D +S+N +I+ Y
Sbjct: 268 LGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 423 AQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFD 482
+Q ++ F+ M +C + + ++L +++ +L+ G ++H + +
Sbjct: 327 SQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH---GIHGQGDKALNFFRQ 539
+ V LVDMY KC ++A +F +P+ ++V W A+IS + G+HG G L F +
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTK 442
Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
M +R D TF ++L A + + G++ + ++ G +VD++ + G
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCG 501
Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
+ A + MP R +A W AL+ A +G+ E A ++ E
Sbjct: 502 SIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 29/437 (6%)
Query: 43 NESREIDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSR 99
++ + F + ++ LH ++LHAL V +G + ++++FY+ + +R
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 100 HTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL 159
FD + + ++N +IS Y + + ++ F + R +F F +L NL
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF-PFATMLSIAANL 364
Query: 160 VD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
G+++HC L + + V SL+ MY + + A +F +P R + SW A+I
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
SGY Q G L + +MR + D T A++L A ++L G +H +I++ G
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 277 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 336
N+F + L++MYAK G ++ A++VF++M +R+ VSWN++I+A+ + D A G F M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 337 QQAGIQPD------LLTLVSLTSIVAQLNDCRNSRS-VHGFIMRRGWFMEDVIIGNAVVD 389
++G+QPD +LT S V Q + + S ++G ++ + ++D
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA-------CMLD 597
Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEVFQMMEECNEIN 445
+ + G A + + +P + D I W++++ + LA A E ME+
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR--- 654
Query: 446 PNQGTYVSILPAYSHVG 462
+ YVS+ Y+ G
Sbjct: 655 -DAAAYVSMSNIYAAAG 670
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 288/767 (37%), Positives = 435/767 (56%), Gaps = 17/767 (2%)
Query: 66 LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGR 125
+H L+V +G ++ VF LV+FY G ++ + FD + RN+ +WNSMI V+ G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 126 LSEAVDCFYQFTLTSG---LRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVF 179
E+ + +G PD T VL C R + GK +H +KL + ++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
+ +L+ MY + G A+ +F ++ SWN M+ G+ G+ D+L +M G
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 240 --VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
V D +T+ + +PVC + S +H Y +K +N V+N + YAK G + +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
A RVF + + V SWN++I + QSNDP + M+ +G+ PD T+ SL S ++
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
L R + VHGFI+R W D+ + +V+ +Y G + + A+F+ + K ++SWNT
Sbjct: 509 LKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY---SHVGALRQGIKIHARV 474
+ITGY QNG A+ VF+ M + Q +S++P + S + +LR G + HA
Sbjct: 568 VITGYLQNGFPDRALGVFRQMV----LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
+K+ L D F+A L+DMY K G I + +F + S+ WNA+I +GIHG +A+
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
F +M G PD +TF+ +LTAC+HSGL+ EG RY M+ FG+KP+LKHY C++D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 595 FGRAGHLGMAHNFI-QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGY 653
GRAG L A + + M D IW +LL +CRIH N+E+G + +LFE++ E
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 654 YVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKI 713
YVL+SN+YA +GKWE V +VR + L+K G S IE+N KV F G R +E+I
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863
Query: 714 YDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQI 773
L K+ +GY PD V D+ E+EK L HSE+LA+ +G+I + + I++
Sbjct: 864 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 923
Query: 774 FKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
+KNLR+C DCHN K IS++ EREI+VRD+ RFHHFK+G+CSCGDYW
Sbjct: 924 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 176/586 (30%), Positives = 306/586 (52%), Gaps = 30/586 (5%)
Query: 64 KRLHALLVVSGKIKTV-FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVR 122
+++H L+ S +++ T+++ YA G SR FD + +N++ WN++IS Y R
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 123 CGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVF 179
E ++ F + T+ L PD +T+P V+KAC + D G +H V+K G DVF
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVF 223
Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE- 238
V +L+ Y G A +LFD MP R+ SWN+MI + +G + E+ +L EM E
Sbjct: 224 VGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Query: 239 --GVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 295
G M D T+ ++LPVCAR I G +H + VK L+ L ++N L++MY+K G +
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 296 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ--AG---IQPDLLTLVS 350
+A +F ++VVSWN+++ + D HG F ++Q AG ++ D +T+++
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGD---THGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 351 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 410
+ + + + +H + +++ F+ + ++ NA V YAK G ++ A VF G+ K
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 411 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
V SWN LI G+AQ+ +++ M + + + P+ T S+L A S + +LR G ++
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Query: 471 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 530
H +I+N L D+FV ++ +Y CG + +LF + S V WN +I+ + +G
Sbjct: 519 HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 578
Query: 531 DKALNFFRQMLDEGVRPDHITFVSLLTACS-----HSGLVSEGQRYFHMMQEEFGIKPHL 585
D+AL FRQM+ G++ I+ + + ACS G + H+++++ I L
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638
Query: 586 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
+D++ + G + + + + AS W A++ IHG
Sbjct: 639 ------IDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 207/408 (50%), Gaps = 12/408 (2%)
Query: 162 GKKIHCSVL-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
G+KIH V D + ++ MY G + +R +FD + ++ WNA+IS Y
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 221 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
++ E L+ EM + D T ++ CA ++ GL +H +VK GL ++
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF---TTM 336
FV N L++ Y G + AL++FD M ER++VSWNS+I + S++ + F M
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMM 280
Query: 337 QQAG---IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 393
++ G PD+ TLV++ + A+ + + VHG+ ++ +++++ NA++DMY+K
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSK 339
Query: 394 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYV 452
G I +A +F+ K+V+SWNT++ G++ G +V QM+ ++ ++ T +
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 512
+ +P H L ++H +K ++ VA V Y KCG + A +F+ +
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 513 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
+ WNA+I H +L+ QM G+ PD T SLL+ACS
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 204/430 (47%), Gaps = 28/430 (6%)
Query: 60 LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISV 119
L +K LH + + + V YA G LS+++ F I + V +WN++I
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 120 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEW 176
+ + ++D Q + SGL PD +T +L AC ++L GK++H +++ E
Sbjct: 471 HAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 177 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 236
D+FV S+L +Y G + LFD M + SWN +I+GY Q+G AL + +M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
L G+ + I++ + C+ ++ G H Y +KH LE + F++ +LI+MYAK G +
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 297 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
+ +VF+ + E+ SWN++I Y A F MQ+ G PD LT + +
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV----- 704
Query: 357 QLNDCRNSRSVHGFI-----MRRGWFMEDVIIGNA-VVDMYAKLGIINSACAVF--EGLP 408
L C +S +H + M+ + ++ + A V+DM + G ++ A V E
Sbjct: 705 -LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
Query: 409 VKDVISWNTLITG--YAQNGLASE--AIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
DV W +L++ QN E A ++F++ E E YV + Y+ +G
Sbjct: 764 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE------NYVLLSNLYAGLGKW 817
Query: 465 RQGIKIHARV 474
K+ R+
Sbjct: 818 EDVRKVRQRM 827
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 6/278 (2%)
Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
D R +H + D ++ ++ MYA G + + VF+ L K++ WN +
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 419 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 478
I+ Y++N L E +E F M ++ P+ TY ++ A + + + G+ +H V+K
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 538
L DVFV LV YG G + DA+ LF +P + V WN++I +G +++
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 539 QMLDE----GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
+M++E PD T V++L C+ + G + H + + L ++D+
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDM 336
Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
+ + G + A I M + W ++G G+
Sbjct: 337 YSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGD 373
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/722 (38%), Positives = 430/722 (59%), Gaps = 8/722 (1%)
Query: 103 DHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNL 159
D S + N +S Y+ G+ S + CF + S + D TF +L +L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTFILMLATAVKVDSL 331
Query: 160 VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGY 219
G+++HC LKLG + + V+ SL++MYC+ AR +FD+M RD SWN++I+G
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFN 278
Q+G VEA+ + ++ G+ D T+ S+L + LS +H++ +K +
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 279 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
FVS LI+ Y++ M+ A +F++ D+V+WN+++A Y QS+D F M +
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
G + D TL ++ L + VH + ++ G+ + D+ + + ++DMY K G ++
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL-DLWVSSGILDMYVKCGDMS 569
Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
+A F+ +PV D ++W T+I+G +NG A VF M + P++ T ++ A
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKAS 628
Query: 459 SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWN 518
S + AL QG +IHA +K D FV T LVDMY KCG IDDA LF ++ + WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 519 AIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
A++ HG+G + L F+QM G++PD +TF+ +L+ACSHSGLVSE ++ M +
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
+GIKP ++HY C+ D GRAG + A N I++M + AS++ LL ACR+ G+ E G
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
+ +L E++ + YVL+SN+YA KW+ + R++ + +KK PG+S IEV NK+
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
IF +R++ + E IY +++++ +K GYVP+ F L DVEE+EKE L HSE+LA+
Sbjct: 869 IFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAV 928
Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
AFG++S+PP +PI++ KNLRVCGDCHN K+I+++ REI++RD+NRFH FKDGICSCGD
Sbjct: 929 AFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGD 988
Query: 819 YW 820
YW
Sbjct: 989 YW 990
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 244/486 (50%), Gaps = 12/486 (2%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
+++H + + G + S L+N Y L F+R FD++S R++ +WNS+I+ +
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG----KKIHCSVLKLGFEWDVF 179
G EAV C + L GL+PD YT VLKA +L +G K++H +K+ D F
Sbjct: 395 GLEVEAV-CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
V+ +L+ Y R A LF+ D +WNAM++GY QS + + L + M +G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
D T+A++ C I G +H Y +K G + +L+VS+ +++MY K G M A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 300 RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 359
FD + D V+W ++I+ ++ + A F+ M+ G+ PD T+ +L + L
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 360 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLI 419
R +H ++ D +G ++VDMYAK G I+ A +F+ + + ++ +WN ++
Sbjct: 633 ALEQGRQIHANALKLNC-TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 691
Query: 420 TGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL 479
G AQ+G E +++F+ M+ I P++ T++ +L A SH G + + K H R +
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGLVSEAYK-HMRSMHGDY 749
Query: 480 CFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNF 536
+ +CL D G+ G + A +L + +S + +++ + G +
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Query: 537 FRQMLD 542
++L+
Sbjct: 810 ATKLLE 815
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 264/580 (45%), Gaps = 53/580 (9%)
Query: 67 HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRL 126
HA ++ + F L++ Y+ G L+++R FD + R++ +WNS+++ Y +
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 127 SEAVDCFYQ-FTLTSGLRPDF-----YTFPPVLKACRN---LVDGKKIHCSVLKLGFEWD 177
V+ Q F L LR D T P+LK C + + + H K+G + D
Sbjct: 122 --VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGD 179
Query: 178 VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
FVA +L+++Y +FG + LF++MP RD WN M+ Y + G EA+D+
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
G++ + IT+ + + D+ +G + F + N
Sbjct: 240 SGLNPNEITLRLLARISG--DDSDAG------------QVKSFANGN------------- 272
Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
D +++ N ++ Y S F M ++ ++ D +T + + + +
Sbjct: 273 -----DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVK 327
Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
++ + VH ++ G + + + N++++MY KL A VF+ + +D+ISWN+
Sbjct: 328 VDSLALGQQVHCMALKLGLDLM-LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG---ALRQGIKIHARV 474
+I G AQNGL EA+ +F + C + P+Q T S+L A S + +L + + +HA
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK 445
Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
I N D FV+T L+D Y + + +A LF + V WNA+++ + G K L
Sbjct: 446 INN--VSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTL 502
Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
F M +G R D T ++ C +++G++ H + G L ++D+
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-VHAYAIKSGYDLDLWVSSGILDM 561
Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
+ + G + A ++PV PD W ++ C +G E
Sbjct: 562 YVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEE 600
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 174/387 (44%), Gaps = 42/387 (10%)
Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
S +++ G H I+ F+ NNLI+MY+K G + +A RVFD+M +RD+VSWNSI
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 317 IAAYEQSNDPIT-----AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 371
+AAY QS++ + A F ++Q + +TL + + S S HG+
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 372 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 431
+ G ++ + G A+V++Y K G + +FE +P +DV+ WN ++ Y + G EA
Sbjct: 172 CKIGLDGDEFVAG-ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 432 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 491
I++ +NPN+ T + +L S + +K A
Sbjct: 231 IDLSSAFHSSG-LNPNEIT-LRLLARISGDDSDAGQVKSFANG----------------- 271
Query: 492 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 551
+DA S+ S + N +S + GQ L F M++ V D +T
Sbjct: 272 --------NDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317
Query: 552 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 611
F+ +L ++ GQ+ H M + G+ L +++++ + G A NM
Sbjct: 318 FILMLATAVKVDSLALGQQ-VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 612 PVRPDASIWGALLGACRIHGNMELGAV 638
R D W +++ +G +E+ AV
Sbjct: 377 SER-DLISWNSVIAGIAQNG-LEVEAV 401
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 6/171 (3%)
Query: 56 SC-TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
SC T L +++HA + F T LV+ YA G + + F I N+ WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVL-- 170
+M+ + G E + F Q + G++PD TF VL AC + LV H +
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
G + ++ + L R GL A L + M + S S + C+
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 798
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 531 bits (1369), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/621 (43%), Positives = 398/621 (64%), Gaps = 9/621 (1%)
Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
D SWN++I+ +SG++ EAL MR + + + C+ +I SG H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
G + ++FVS+ LI MY+ G + A +VFD++ +R++VSW S+I Y+ + + +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 328 TAHGFFTTM------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
A F + + D + LVS+ S +++ + S+H F+++RG F V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGV 218
Query: 382 IIGNAVVDMYAKLGIINSACA--VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 439
+GN ++D YAK G A A +F+ + KD +S+N++++ YAQ+G+++EA EVF+ +
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
+ + N T ++L A SH GALR G IH +VI+ L DV V T ++DMY KCGR+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
+ A F ++ + W A+I+ +G+HG KAL F M+D GVRP++ITFVS+L AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
SH+GL EG R+F+ M+ FG++P L+HYGCMVDL GRAG L A++ IQ M ++PD+ I
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
W +LL ACRIH N+EL ++ RLFE+DS N GYY+L+S+IYA+ G+W+ V+ VR + ++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
RGL K PG+S +E+N +V +F G+ HP+ EKIY+ L L K+ GYV + S V D
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578
Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
V+E+EKE L HSE+LAIAFGI+++ P S + + KNLRVC DCHN K IS+I +RE +
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 800 VRDSNRFHHFKDGICSCGDYW 820
VRD+ RFHHFKDG CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 241/438 (55%), Gaps = 17/438 (3%)
Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD-- 161
++ +V++WNS+I+ R G +EA+ F S L P +FP +KAC +L D
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSLFDIF 93
Query: 162 -GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
GK+ H G++ D+FV+++L+ MY G ARK+FD++P R+ SW +MI GY
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 221 QSGNAVEALDILDEMRL------EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHG 274
+GNA++A+ + ++ + + + +D + + S++ C+R IH +++K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 275 LEFNLFVSNNLINMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
+ + V N L++ YAK G + A ++FDQ++++D VS+NSI++ Y QS A
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 333 FTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
F + + + + +TL ++ V+ R + +H ++R G +DVI+G +++DMY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMY 332
Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
K G + +A F+ + K+V SW +I GY +G A++A+E+F M + + PN T+
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITF 391
Query: 452 VSILPAYSHVGALRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP 510
VS+L A SH G +G + +A + + + C+VD+ G+ G + A L ++
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 511 -RSSSVPWNAIISCHGIH 527
+ S+ W+++++ IH
Sbjct: 452 MKPDSIIWSSLLAACRIH 469
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 188/393 (47%), Gaps = 37/393 (9%)
Query: 55 QSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVY 111
++C+ L + K+ H V G +F S+ L+ Y+ G L +R FD I RN+
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 112 TWNSMISVYVRCGRLSEAVDCFYQFTLTS-----GLRPDFYTFPPVLKAC-RNLVDG--K 163
+W SMI Y G +AV F + + D V+ AC R G +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN--VARKLFDDMPVRDSGSWNAMISGYCQ 221
IH V+K GF+ V V +LL Y + G VARK+FD + +D S+N+++S Y Q
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 222 SGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
SG + EA ++ + + + V+ + IT++++L + S + G IH +++ GLE ++
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
V ++I+MY K G + A + FD+M ++V SW ++IA Y A F M +G
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG-----------NAVVD 389
++P+ +T VS+ + + H + GW + + G +VD
Sbjct: 384 VRPNYITFVSVLAACS-----------HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVD 432
Query: 390 MYAKLGIINSACAVFEGLPVK-DVISWNTLITG 421
+ + G + A + + + +K D I W++L+
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/684 (38%), Positives = 428/684 (62%), Gaps = 8/684 (1%)
Query: 140 SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 199
SG+ D + + ++ + + K+IH +L LG ++ F+ L+H FG AR+
Sbjct: 16 SGIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 200 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 259
+FDD+P WNA+I GY ++ + +AL + M+L VS D T +L C+ +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 260 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSII 317
+ G +H + + G + ++FV N LI +YAK + A VF+ + ER +VSW +I+
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
+AY Q+ +P+ A F+ M++ ++PD + LVS+ + L D + RS+H +++ G
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 378 ME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
+E D++I ++ MYAK G + +A +F+ + ++I WN +I+GYA+NG A EAI++F
Sbjct: 255 IEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 496
M ++ P+ + S + A + VG+L Q ++ V ++ DVF+++ L+DM+ KC
Sbjct: 313 EMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 497 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 556
G ++ A +F + V W+A+I +G+HG+ +A++ +R M GV P+ +TF+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 557 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 616
AC+HSG+V EG +F+ M + I P +HY C++DL GRAGHL A+ I+ MPV+P
Sbjct: 432 MACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 617 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 676
++WGALL AC+ H ++ELG A+ +LF +D N G+YV +SN+YA W+ V EVR
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 677 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 736
+++GL K G S +EV +++ F G+++HP+YE+I ++ + +++K G+V +K
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610
Query: 737 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 796
L D+ ++E E L SHSER+AIA+G+IS+P +P++I KNLR C +CH TK IS++ +R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670
Query: 797 EIIVRDSNRFHHFKDGICSCGDYW 820
EI+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 258/484 (53%), Gaps = 9/484 (1%)
Query: 50 FDDLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
+ L S T +K++HA L+V G + F TKL++ ++ GD++F+R FD +
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIH 166
++ WN++I Y R +A+ + L + PD +TFP +LKAC L G+ +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVH 142
Query: 167 CSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGN 224
V +LGF+ DVFV L+ +Y + AR +F+ +P+ R SW A++S Y Q+G
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
+EAL+I +MR V D + + S+L ++ G IH +VK GLE + +
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
L MYAK G + A +FD+M +++ WN++I+ Y ++ A F M ++PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
+++ S S AQ+ +RS++ ++ R + +DV I +A++DM+AK G + A VF
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
+ +DV+ W+ +I GY +G A EAI +++ ME ++PN T++ +L A +H G +
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMER-GGVHPNDVTFLGLLMACNHSGMV 440
Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISC 523
R+G R+ + + C++D+ G+ G +D A + +P V W A++S
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 524 HGIH 527
H
Sbjct: 501 CKKH 504
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust.
Identities = 291/793 (36%), Positives = 457/793 (57%), Gaps = 18/793 (2%)
Query: 35 QISPDCLENESREIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYAN 91
++SPD + F + ++C L + ++ ++ G +F LV+ Y+
Sbjct: 101 KVSPD-------KYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSR 153
Query: 92 LGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPP 151
+G L+ +R FD + R++ +WNS+IS Y G EA++ +++ S + PD +T
Sbjct: 154 MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSS 212
Query: 152 VLKACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
VL A NL+ G+ +H LK G V V L+ MY +F AR++FD+M VRD
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272
Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
S S+N MI GY + E++ + E L+ D +TV+S+L C ++ I+
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYN 331
Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
Y++K G V N LI++YAK G M A VF+ M +D VSWNSII+ Y QS D +
Sbjct: 332 YMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLME 391
Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
A F M Q D +T + L S+ +L D + + +H ++ G + D+ + NA++
Sbjct: 392 AMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI-DLSVSNALI 450
Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
DMYAK G + + +F + D ++WNT+I+ + G + ++V M + +E+ P+
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDM 509
Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 508
T++ LP + + A R G +IH +++ ++ + L++MY KCG ++++ +F +
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 509 VPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEG 568
+ R V W +I +G++G+G+KAL F M G+ PD + F++++ ACSHSGLV EG
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 569 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 628
F M+ + I P ++HY C+VDL R+ + A FIQ MP++PDASIW ++L ACR
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Query: 629 IHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGW 688
G+ME S R+ E++ ++ GY +L SN YA + KW+ V +R +D+ + K PG+
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGY 749
Query: 689 SSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV-EEDEKEH 747
S IEV V +F +G+ + P+ E IY L L + M GY+PD V Q++ EE+EK
Sbjct: 750 SWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRR 809
Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
++ HSERLAIAFG++++ P +P+Q+ KNLRVCGDCH TK IS+I REI+VRD+NRFH
Sbjct: 810 LICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFH 869
Query: 808 HFKDGICSCGDYW 820
FKDG CSC D W
Sbjct: 870 LFKDGTCSCKDRW 882
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 316/588 (53%), Gaps = 16/588 (2%)
Query: 54 FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYT 112
S + L+ ++R+HAL++ G + F S KL++ Y++ + + S F +S +NVY
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
WNS+I + + G EA++ FY S + PD YTFP V+KAC L D G ++ +
Sbjct: 74 WNSIIRAFSKNGLFPEALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
L +GFE D+FV +L+ MY R GL AR++FD+MPVRD SWN++ISGY G EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
+I E++ + D TV+S+LP + G +H + +K G+ + V+N L+ MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFTTMQQAGIQPDLL 346
KF A RVFD+M RD VS+N++I Y E + + F + Q +PDLL
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM--FLENLDQ--FKPDLL 308
Query: 347 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 406
T+ S+ L D ++ ++ ++++ G+ +E + N ++D+YAK G + +A VF
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNS 367
Query: 407 LPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
+ KD +SWN++I+GY Q+G EA+++F+MM E + TY+ ++ + + L+
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKF 426
Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGI 526
G +H+ IK+ +C D+ V+ L+DMY KCG + D++ +F + +V WN +IS
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 527 HGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 586
G L QM V PD TF+ L C+ G+ H FG + L+
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE-IHCCLLRFGYESELQ 545
Query: 587 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
+++++ + G L + + M R D W ++ A ++G E
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGE 592
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 241/485 (49%), Gaps = 6/485 (1%)
Query: 153 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGS 211
L + NL + ++IH V+ LG + F + L+ Y F + +F + P ++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
WN++I + ++G EAL+ ++R VS D T S++ CA + G L++ I+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 272 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 331
G E +LFV N L++MY++ G++ A +VFD+M RD+VSWNS+I+ Y A
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 332 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
+ ++ + I PD T+ S+ L + + +HGF ++ G V++ N +V MY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG-VNSVVVVNNGLVAMY 252
Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
K A VF+ + V+D +S+NT+I GY + + E++ +F +E ++ P+ T
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTV 310
Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
S+L A H+ L I+ ++K + V L+D+Y KCG + A +F +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
+V WN+IIS + G +A+ F+ M+ + DHIT++ L++ + + G+
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG- 429
Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
H + GI L ++D++ + G +G + +M D W ++ AC G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFG 488
Query: 632 NMELG 636
+ G
Sbjct: 489 DFATG 493
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/761 (37%), Positives = 445/761 (58%), Gaps = 15/761 (1%)
Query: 73 SGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDC 132
SG + +F + LV+ +A G LS++R F+ + RN T N ++ VR EA
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 133 FYQFTLTSGLRPDFY-----TFPPV-LKACRNLVDGKKIHCSVLKLGF-EWDVFVAASLL 185
F + P+ Y +FP L L G+++H V+ G ++ V + L+
Sbjct: 297 FMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 186 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPI 245
+MY + G AR++F M +DS SWN+MI+G Q+G +EA++ MR +
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 246 TVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
T+ S L CA G IH +K G++ N+ VSN L+ +YA+ G + ++F M
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 306 MERDVVSWNSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
E D VSWNSII A +S + A F Q+AG + + +T S+ S V+ L+
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYA 423
+ +HG ++ ++ NA++ Y K G ++ +F + + D ++WN++I+GY
Sbjct: 537 KQIHGLALKNN-IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDV 483
N L ++A+++ M + + + Y ++L A++ V L +G+++HA ++ CL DV
Sbjct: 596 HNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM-LD 542
V + LVDMY KCGR+D A+ F +P +S WN++IS + HGQG++AL F M LD
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 543 EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
PDH+TFV +L+ACSH+GL+ EG ++F M + +G+ P ++H+ CM D+ GRAG L
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774
Query: 603 MAHNFIQNMPVRPDASIWGALLGAC-RIHG-NMELGAVASDRLFEVDSENVGYYVLMSNI 660
+FI+ MP++P+ IW +LGAC R +G ELG A++ LF+++ EN YVL+ N+
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 834
Query: 661 YANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNL 720
YA G+WE + + R +D +KK G+S + + + V +F G+++HP + IY +L+ L
Sbjct: 835 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 894
Query: 721 TAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS-PIQIFKNLRV 779
KM+ GYVP F L D+E++ KE IL+ HSE+LA+AF + + + PI+I KNLRV
Sbjct: 895 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 954
Query: 780 CGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
CGDCH+ K+IS+I R+II+RDSNRFHHF+DG CSC D+W
Sbjct: 955 CGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 299/610 (49%), Gaps = 27/610 (4%)
Query: 45 SREIDFDDLFQSCTKLHHV-----KRLHALLV-VSGKIKTVFSSTKLVNFYANLGDLSFS 98
S + F + ++C ++ V +++H L+ +S + V S+ + ++ +G + ++
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159
Query: 99 RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
F I +N +WNS+ISVY + G A F G RP YTF ++ +
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY-DGSRPTEYTFGSLVTTACS 218
Query: 159 LVDG-----KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWN 213
L + ++I C++ K G D+FV + L+ + + G + ARK+F+ M R++ + N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 214 AMISGYCQSGNAVEALDILDEMRLEGVSMDP---ITVASILPVCARSDNI--LSGLLIHL 268
++ G + EA + +M + + P + + S P + ++ + G +H
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 269 YIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 327
+++ GL +F + + N L+NMYAK G + A RVF M ++D VSWNS+I +Q+ I
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 328 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
A + +M++ I P TL+S S A L + + +HG ++ G + +V + NA+
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSNAL 456
Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA-SEAIEVFQMMEECNEINP 446
+ +YA+ G +N +F +P D +SWN++I A++ + EA+ F + +
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KL 515
Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
N+ T+ S+L A S + G +IH +KN + + L+ YGKCG +D +F
Sbjct: 516 NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF 575
Query: 507 YQVP-RSSSVPWNAIISCHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 564
++ R +V WN++IS + IH + KAL+ ML G R D + ++L+A +
Sbjct: 576 SRMAERRDNVTWNSMISGY-IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVAT 634
Query: 565 VSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
+ G H ++ + +VD++ + G L A F MPVR S W +++
Sbjct: 635 LERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMI 692
Query: 625 GACRIHGNME 634
HG E
Sbjct: 693 SGYARHGQGE 702
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 281/588 (47%), Gaps = 25/588 (4%)
Query: 55 QSCTKLHHVKRL-HALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
QSC R H+ L + K V+ L+N Y GD +R FD + RN +W
Sbjct: 11 QSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSW 70
Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN-----LVDGKKIHCS 168
++S Y R G EA+ F + + G+ + Y F VL+AC+ ++ G++IH
Sbjct: 71 ACIVSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 169 VLKLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVE 227
+ KL + D V+ L+ MY + G A F D+ V++S SWN++IS Y Q+G+
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 228 ALDILDEMRLEGVSMDPITVASILPV-CARSDNILSGL-LIHLYIVKHGLEFNLFVSNNL 285
A I M+ +G T S++ C+ ++ + L I I K GL +LFV + L
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL 249
Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPD 344
++ +AK G + +A +VF+QM R+ V+ N ++ + A F M + P+
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Query: 345 LLTLVSLTSI----VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
++ L+S +A+ + R VHG ++ G V IGN +V+MYAK G I A
Sbjct: 310 SYVIL-LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
VF + KD +SWN++ITG QNG EA+E ++ M ++I P T +S L + +
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCAS 427
Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
+ + G +IH +K + +V V+ L+ +Y + G +++ +F +P V WN+I
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 521 ISCHGIHGQGDKALN----FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
I G + +++L F G + + ITF S+L+A S G++ H +
Sbjct: 488 I---GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLA 543
Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 624
+ I ++ +G+ G + M R D W +++
Sbjct: 544 LKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 238/473 (50%), Gaps = 18/473 (3%)
Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
H + K + DV++ +L++ Y G + ARK+FD+MP+R+ SW ++SGY ++G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNLFVSN 283
EAL L +M EG+ + S+L C S IL G IH + K + VSN
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 284 NLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
LI+MY K G + +AL F + ++ VSWNSII+ Y Q+ D +A F++MQ G +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 343 PDLLTLVSLTSIVAQLN--DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
P T SL + L D R + I + G + D+ +G+ +V +AK G ++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG-LLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL---PA 457
VF + ++ ++ N L+ G + EA ++F M +++P +YV +L P
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPE 320
Query: 458 YS---HVGALRQGIKIHARVIKNCLC-FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
YS VG L++G ++H VI L F V + LV+MY KCG I DA +FY +
Sbjct: 321 YSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
SV WN++I+ +G +A+ ++ M + P T +S L++C+ GQ+ H
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IH 438
Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
+ GI ++ ++ L+ G+L +MP S W +++GA
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 54 FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
F S L +HA V + V + LV+ Y+ G L ++ F+ + RN Y+W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLG 173
NSMIS Y R G+ EA+ F L PD TF VL AC H +L+ G
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS--------HAGLLEEG 740
Query: 174 FE 175
F+
Sbjct: 741 FK 742
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust.
Identities = 287/784 (36%), Positives = 424/784 (54%), Gaps = 108/784 (13%)
Query: 144 PDFYTFPPVLKACRNLVD-----------GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
P + +L+ C NL+ + +HC V+K G + V++ +L+++Y + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 193 LANVARKLFDDMPVR-------------------------------DSGSWNAMISGYCQ 221
A ARKLFD+MP+R DS SW MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
G +A+ ++ +M EG+ T+ ++L A + + +G +H +IVK GL N+ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 282 SNNLINMYAK-------------------------------FGMMRHALRVFDQMMERDV 310
SN+L+NMYAK G M A+ F+QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
V+WNS+I+ + Q + A F+ M + + + PD TL S+ S A L + +H
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 370 FIMRRGWFMEDVIIG--------------------------------NAVVDMYAKLGII 397
I+ G+ + +++ A++D Y KLG +
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 398 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 457
N A +F L +DV++W +I GY Q+G EAI +F+ M + PN T ++L
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSV 422
Query: 458 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
S + +L G +IH +K+ + V V+ L+ MY K G I A F + +V
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
W ++I HG ++AL F ML EG+RPDHIT+V + +AC+H+GLV++G++YF MM+
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
+ I P L HY CMVDLFGRAG L A FI+ MP+ PD WG+LL ACR+H N++LG
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602
Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
VA++RL ++ EN G Y ++N+Y+ GKWE ++R +D +KK G+S IEV +K
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 756
V +F + THP+ +IY ++ + ++K +GYVPD + VL D+EE+ KE IL HSE+L
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722
Query: 757 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 816
AIAFG+IS+P K+ ++I KNLRVC DCH KFIS++ REIIVRD+ RFHHFKDG CSC
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782
Query: 817 GDYW 820
DYW
Sbjct: 783 RDYW 786
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 208/479 (43%), Gaps = 77/479 (16%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
K++H+ +V G V S L+N YA GD ++ FD + R++ +WN+MI+++++
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 124 GRLS-------------------------------EAVDCFYQFTLTSGLRPDFYTFPPV 152
G++ A+D F + S L PD +T V
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 153 LKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD-----DM 204
L AC NL GK+IH ++ GF+ V +L+ MY R G AR+L + D+
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 205 PV----------------------------RDSGSWNAMISGYCQSGNAVEALDILDEMR 236
+ RD +W AMI GY Q G+ EA+++ M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 237 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 296
G + T+A++L V + ++ G IH VK G +++ VSN LI MYAK G +
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 297 HALRVFDQMM-ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 355
A R FD + ERD VSW S+I A Q A F TM G++PD +T V + S
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 356 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVIS 414
R + + + +VD++ + G++ A E +P++ DV++
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 415 WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 470
W +L++ + L A E ++E N G Y ++ YS G + KI
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEP-----ENSGAYSALANLYSACGKWEEAAKI 639
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 62 HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS-YRNVYTWNSMISVY 120
H K++H V SG+I +V S L+ YA G+++ + FD I R+ +W SMI
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 121 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHCSVLKLGFEWDV 178
+ G EA++ F + L GLRPD T+ V AC + LV+ + + ++K + D
Sbjct: 491 AQHGHAEEALELF-ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK---DVDK 546
Query: 179 FVA-----ASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISG 218
+ A ++ ++ R GL A++ + MP+ D +W +++S
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 513 bits (1322), Expect = e-144, Method: Compositional matrix adjust.
Identities = 270/731 (36%), Positives = 430/731 (58%), Gaps = 25/731 (3%)
Query: 102 FDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RN 158
FD ++ + + WN MI + CG EAV FY + +G++ D +T+P V+K+ +
Sbjct: 87 FDEMNKADAFLWNVMIKGFTSCGLYIEAVQ-FYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 159 LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISG 218
L +GKKIH V+KLGF DV+V SL+ +Y + G A A K+F++MP RD SWN+MISG
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 219 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF- 277
Y G+ +L + EM G D + S L C+ + G IH + V+ +E
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM- 336
++ V ++++MY+K+G + +A R+F+ M++R++V+WN +I Y ++ A F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
+Q G+QPD++T ++L A L R++HG+ MRRG F+ +++ A++DMY + G
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRG-FLPHMVLETALIDMYGECGQ 380
Query: 397 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
+ SA +F+ + K+VISWN++I Y QNG A+E+FQ + + + + P+ T SILP
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASILP 439
Query: 457 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP 516
AY+ +L +G +IHA ++K+ + + LV MY CG ++DA F + V
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 517 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 576
WN+II + +HG G ++ F +M+ V P+ TF SLL ACS SG+V EG YF M+
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 577 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 636
E+GI P ++HYGCM+DL GR G+ A F++ MP P A IWG+LL A R H ++ +
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619
Query: 637 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 696
A++++F+++ +N G YVL+ N+YA G+WE V+ ++ L +G+ +T S++E K
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGK 679
Query: 697 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS----- 751
+F G+R+H KIY E+ ++ ++M V ++ + V E ++ S
Sbjct: 680 SHVFTNGDRSHVATNKIY-EVLDVVSRM-----VGEEDIYVHCVSRLRPETLVKSRSNSP 733
Query: 752 --HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF 809
HS RLA FG+IS+ + + N R+C CH + + S++T REI+V DS FHHF
Sbjct: 734 RRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHF 793
Query: 810 KDGICSCGDYW 820
+G CSCG+YW
Sbjct: 794 SNGRCSCGNYW 804
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/461 (30%), Positives = 242/461 (52%), Gaps = 17/461 (3%)
Query: 58 TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
+ L K++HA+++ G + V+ L++ Y LG + F+ + R++ +WNSMI
Sbjct: 144 SSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203
Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGF 174
S Y+ G ++ F + L G +PD ++ L AC ++ GK+IHC ++
Sbjct: 204 SGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 175 EW-DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 233
E DV V S+L MY ++G + A ++F+ M R+ +WN MI Y ++G +A
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 234 EMRLE-GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
+M + G+ D IT ++LP A IL G IH Y ++ G ++ + LI+MY +
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
G ++ A +FD+M E++V+SWNSIIAAY Q+ +A F + + + PD T+ S+
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 353 SIVAQLNDCRNSRSVHGFIMR-RGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 411
A+ R +H +I++ R W + II N++V MYA G + A F + +KD
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 412 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 471
V+SWN++I YA +G ++ +F M + +NPN+ T+ S+L A S G + +G + +
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEM-IASRVNPNKSTFASLLAACSISGMVDEGWE-Y 554
Query: 472 ARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP 510
+K D + C++D+ G+ G A ++P
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 203/414 (49%), Gaps = 46/414 (11%)
Query: 72 VSGKIKT--VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
V +I+T V T +++ Y+ G++S++ F+ + RN+ WN MI Y R GR+++A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
CF + + +GL+PD T +L A +++G+ IH ++ GF + + +L+ MY
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPAS-AILEGRTIHGYAMRRGFLPHMVLETALIDMYG 376
Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
G A +FD M ++ SWN++I+ Y Q+G AL++ E+ + D T+AS
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
ILP A S ++ G IH YIVK N + N+L++MYA G + A + F+ ++ +D
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 310 VVSWNSIIAAYEQSNDPITAHGF-------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCR 362
VVSWNSII AY HGF F+ M + + P+ T SL L C
Sbjct: 497 VVSWNSIIMAY-------AVHGFGRISVWLFSEMIASRVNPNKSTFASL------LAAC- 542
Query: 363 NSRSVHGFI---------MRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLP-VKD 411
S+ G + M+R + ++ I ++D+ + G ++A E +P V
Sbjct: 543 ---SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPT 599
Query: 412 VISWNTLITGYAQNG---LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
W +L+ + +A A E ME + N G YV +L Y+ G
Sbjct: 600 ARIWGSLLNASRNHKDITIAEFAAEQIFKME-----HDNTGCYVLLLNMYAEAG 648
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/793 (36%), Positives = 446/793 (56%), Gaps = 25/793 (3%)
Query: 48 IDFDDLFQSCTKLHHV---KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD- 103
+ F L +SC + K +HA L+ L++ Y+ GD + + F+
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 104 --HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--- 158
R+V +W++M++ Y GR +A+ F +F L GL P+ Y + V++AC N
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDF 181
Query: 159 LVDGKKIHCSVLKLG-FEWDVFVAASLLHMYCRFGLA-NVARKLFDDMPVRDSGSWNAMI 216
+ G+ ++K G FE DV V SL+ M+ + + A K+FD M + +W MI
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241
Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 276
+ Q G EA+ +M L G D T++S+ CA +N+ G +H + ++ GL
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 277 FNLFVSNNLINMYAKF---GMMRHALRVFDQMMERDVVSWNSIIAAY-EQSNDPITAHGF 332
+ V +L++MYAK G + +VFD+M + V+SW ++I Y + N A
Sbjct: 302 DD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 333 FTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 391
F+ M Q ++P+ T S L+D R + V G +RG + + N+V+ M+
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMF 418
Query: 392 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 451
K + A FE L K+++S+NT + G +N +A ++ + E E+ + T+
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTF 477
Query: 452 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 511
S+L ++VG++R+G +IH++V+K L + V L+ MY KCG ID A +F +
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 512 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 571
+ + W ++I+ HG + L F QM++EGV+P+ +T+V++L+ACSH GLVSEG R+
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 572 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 631
F+ M E+ IKP ++HY CMVDL RAG L A FI MP + D +W LGACR+H
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657
Query: 632 NMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSI 691
N ELG +A+ ++ E+D Y+ +SNIYA GKWE E+R ++R L K G S I
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Query: 692 EVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV----EEDEKEH 747
EV +K+ FY G+ HP +IYDEL L ++K GYVPD VL + +E EKE
Sbjct: 718 EVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKER 777
Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
+L HSE++A+AFG+IS+ P+++FKNLRVCGDCHN K+IS ++ REI++RD NRFH
Sbjct: 778 LLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFH 837
Query: 808 HFKDGICSCGDYW 820
HFKDG CSC DYW
Sbjct: 838 HFKDGKCSCNDYW 850
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 235/485 (48%), Gaps = 28/485 (5%)
Query: 215 MISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKH 273
+I + +G+ A+ LD M +G+ MD +T +S+L C R+ + G L+H +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 274 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM---ERDVVSWNSIIAAYEQSNDPITAH 330
+E + + N+LI++Y+K G A VF+ M +RDVVSW++++A Y + + A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
F + G+ P+ ++ + + R GF+M+ G F DV +G +++DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 391 YAK-LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
+ K +A VF+ + +V++W +IT Q G EAI F M + ++
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKF 270
Query: 450 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLF 506
T S+ A + + L G ++H+ I++ L D V LVDMY KC G +DD +F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 507 YQVPRSSSVPWNAIISCHGIH-GQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGL 564
++ S + W A+I+ + + +A+N F +M+ +G V P+H TF S AC G
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC---GN 385
Query: 565 VSEGQRYFHMMQEEF--GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 622
+S+ + ++ + F G+ + ++ +F ++ + A +++ + S
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 623 LLGACRIHGNMELGAVASDRLFEVDSENVG-----YYVLMSNIYANVGKWEGVDEVRSLA 677
L G CR + N E A L E+ +G + L+S + ANVG +++ S
Sbjct: 446 LDGTCR-NLNFEQ---AFKLLSEITERELGVSAFTFASLLSGV-ANVGSIRKGEQIHSQV 500
Query: 678 RDRGL 682
GL
Sbjct: 501 VKLGL 505
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/646 (39%), Positives = 378/646 (58%), Gaps = 38/646 (5%)
Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
+W ++I + +AL EMR G D S+L C ++ G +H +I
Sbjct: 72 AWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131
Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHAL------------------------------- 299
V+ G++ +L+ N L+NMYAK M +
Sbjct: 132 VRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG 191
Query: 300 -----RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
RVF+ M +DVVS+N+IIA Y QS A M ++PD TL S+ I
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
++ D + +HG+++R+G DV IG+++VDMYAK I + VF L +D IS
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
WN+L+ GY QNG +EA+ +F+ M ++ P + S++PA +H+ L G ++H V
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
++ ++F+A+ LVDMY KCG I A +F ++ V W AII H +HG G +A+
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
+ F +M +GV+P+ + FV++LTACSH GLV E YF+ M + +G+ L+HY + DL
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
GRAG L A+NFI M V P S+W LL +C +H N+EL ++++F VDSEN+G Y
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
VLM N+YA+ G+W+ + ++R R +GL+K P S IE+ NK F +G+R+HP +KI
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 609
Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
+ L+ + +M+ GYV D S VL DV+E+ K +L HSERLA+AFGII++ P + I++
Sbjct: 610 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 669
Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
KN+R+C DCH KFIS+ITEREIIVRD++RFHHF G CSCGDYW
Sbjct: 670 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 263/509 (51%), Gaps = 49/509 (9%)
Query: 62 HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
K+LHA + + + S++ +++ Y NL L + F + V W S+I +
Sbjct: 23 QAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 122 RCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDV 178
S+A+ F + SG PD FP VLK+C ++D G+ +H +++LG + D+
Sbjct: 82 DQSLFSKALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 179 FVAASLLHMYCR-------------------------------------FGLANVARKLF 201
+ +L++MY + FG+ +V R++F
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV-RRVF 199
Query: 202 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 261
+ MP +D S+N +I+GY QSG +AL ++ EM + D T++S+LP+ + +++
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 262 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 321
G IH Y+++ G++ ++++ ++L++MYAK + + RVF ++ RD +SWNS++A Y
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 322 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 381
Q+ A F M A ++P + S+ A L + +HG+++ RG F ++
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL-RGGFGSNI 378
Query: 382 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 441
I +A+VDMY+K G I +A +F+ + V D +SW +I G+A +G EA+ +F+ M+
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR- 437
Query: 442 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRID 500
+ PNQ +V++L A SHVG + + + K L ++ + D+ G+ G+++
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 501 DAMSLFYQ--VPRSSSVPWNAIISCHGIH 527
+A + + V + SV W+ ++S +H
Sbjct: 498 EAYNFISKMCVEPTGSV-WSTLLSSCSVH 525
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 194/389 (49%), Gaps = 15/389 (3%)
Query: 99 RHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN 158
R F+ + ++V ++N++I+ Y + G +A+ + T+ L+PD +T VL
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG-TTDLKPDSFTLSSVLPIFSE 254
Query: 159 LVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAM 215
VD GK+IH V++ G + DV++ +SL+ MY + + ++F + RD SWN++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 216 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
++GY Q+G EAL + +M V + +S++P CA + G +H Y+++ G
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 335
N+F+++ L++MY+K G ++ A ++FD+M D VSW +II + A F
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 336 MQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLG 395
M++ G++P+ + V++ + + + + + + +++ AV D+ + G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 396 IINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQGT 450
+ A + V+ S W+TL++ + LA + E +F + E N G
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE------NMGA 548
Query: 451 YVSILPAYSHVGALRQGIKIHARVIKNCL 479
YV + Y+ G ++ K+ R+ K L
Sbjct: 549 YVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Query: 48 IDFDDLFQSCT---KLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH 104
+ F + +C LH K+LH ++ G +F ++ LV+ Y+ G++ +R FD
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDG 162
++ + +W ++I + G EAV F + G++P+ F VL AC + LVD
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 163 K-KIHCSVLKL-GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMIS 217
S+ K+ G ++ A++ + R G A M V +GS W+ ++S
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 282/741 (38%), Positives = 414/741 (55%), Gaps = 51/741 (6%)
Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPD----FYTFPPVLKACRNLVDGKK 164
++ WN IS Y+R GR +EA+ F + S + + Y + R L D
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 165 IHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
V W+V + Y R AR+LF+ MP RD SWN M+SGY Q+G
Sbjct: 123 ERDLV-----SWNVMIKG-----YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
+A + D M + ++ ++L ++ + + + K + L N
Sbjct: 173 VDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACM----LFKSRENWALVSWNC 224
Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF----------- 333
L+ + K + A + FD M RDVVSWN+II Y QS A F
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 334 TTMQQAGIQPDLLTLV-SLTSIVAQLNDCRNSRSVHGFIMRRGWFME------------D 380
T M IQ ++ L + + N+ + + G++ +G ME +
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV--QGERMEMAKELFDVMPCRN 342
Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMME 439
V N ++ YA+ G I+ A +F+ +P +D +SW +I GY+Q+G + EA+ +F QM
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 440 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 499
E + N+ ++ S L + V AL G ++H R++K FV L+ MY KCG I
Sbjct: 403 EGGRL--NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 500 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 559
++A LF ++ V WN +I+ + HG G+ AL FF M EG++PD T V++L+AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 560 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 619
SH+GLV +G++YF+ M +++G+ P+ +HY CMVDL GRAG L AHN ++NMP PDA+I
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 620 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 679
WG LLGA R+HGN EL A+D++F ++ EN G YVL+SN+YA+ G+W V ++R RD
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 680 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 739
+G+KK PG+S IE+ NK F G+ HP+ ++I+ L L +MK GYV S VL D
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 740 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 799
VEE+EKE ++ HSERLA+A+GI+ PI++ KNLRVC DCHN K++++IT R II
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 800 VRDSNRFHHFKDGICSCGDYW 820
+RD+NRFHHFKDG CSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 230/468 (49%), Gaps = 36/468 (7%)
Query: 77 KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCF--- 133
+ V S +++ YA G + +R FD + +N +WN+++S YV+ ++ EA F
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 134 --YQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
+ + L F +++A R D + DV +++ Y +
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEA-RQFFDSMNVR----------DVVSWNTIITGYAQS 263
Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
G + AR+LFD+ PV+D +W AM+SGY Q+ EA ++ D+M + ++ ++L
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAML 319
Query: 252 PVCARSDNI-LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
+ + + ++ L + + N+ N +I YA+ G + A +FD+M +RD
Sbjct: 320 AGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
VSW ++IA Y QS A F M++ G + + + S S A + + +HG
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASE 430
+++ G + +GNA++ MY K G I A +F+ + KD++SWNT+I GY+++G
Sbjct: 435 LVKGG-YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 431 AIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT--- 487
A+ F+ M+ + P+ T V++L A SH G + +G + + ++ + V +
Sbjct: 494 ALRFFESMKR-EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD---YGVMPNSQHY 549
Query: 488 -CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKA 533
C+VD+ G+ G ++DA +L +P + W ++ +HG + A
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 211/462 (45%), Gaps = 30/462 (6%)
Query: 26 LFSAAANSLQISPDCLENESRE----IDFDDLFQSCTKLHHVKRLHALLVVSGKIKTVFS 81
L SA + ++ C+ +SRE + ++ L K + S ++ V S
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD-SMNVRDVVS 252
Query: 82 STKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSG 141
++ YA G + +R FD ++V+TW +M+S Y++ + EA + F + +
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE 312
Query: 142 LRPDF----YTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
+ + Y ++ + L D + C + W+ + Y + G + A
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFD--VMPCRNVST---WNTMITG-----YAQCGKISEA 362
Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
+ LFD MP RD SW AMI+GY QSG++ EAL + +M EG ++ + +S L CA
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 317
+ G +H +VK G E FV N L+ MY K G + A +F +M +D+VSWN++I
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 318 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 377
A Y + A FF +M++ G++PD T+V++ S + R + +
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 378 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNG---LASEAIE 433
M + +VD+ + G++ A + + +P + D W TL+ +G LA A +
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 434 -VFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
+F M E N G YV + Y+ G K+ R+
Sbjct: 603 KIFAMEPE------NSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 47/277 (16%)
Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 528
K + + C D+ + Y + GR ++A+ +F ++PR SSV +N +IS + +G
Sbjct: 50 KSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG 109
Query: 529 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 588
+ + A R++ DE D +++ ++ + + + + F +M E + +
Sbjct: 110 EFELA----RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-----DVCSW 160
Query: 589 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL------------- 635
M+ + + G + A + MP + D S W ALL A + ME
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVS-WNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 636 --------GAVASDRLFEV----DSENVGYYVLMSNI---YANVGKWEGVDEVRSLARDR 680
G V ++ E DS NV V + I YA GK +DE R L +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK---IDEARQLFDES 276
Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
++ W+++ Y NR + +++D++
Sbjct: 277 PVQDVFTWTAMVSG------YIQNRMVEEARELFDKM 307
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/706 (38%), Positives = 402/706 (56%), Gaps = 40/706 (5%)
Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVR 207
+L C+ L + IH ++K+G + + L+ +C F A +F +
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKTIQEP 97
Query: 208 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 267
+ WN M G+ S + V AL + M G+ + T +L CA+S G IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 268 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--------------- 312
+++K G + +L+V +LI+MY + G + A +VFD+ RDVVS
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 313 ----------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 356
WN++I+ Y ++ + A F M + ++PD T+V++ S A
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 357 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 416
Q R VH +I G F ++ I NA++D+Y+K G + +AC +FE LP KDVISWN
Sbjct: 278 QSGSIELGRQVHLWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 417 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 476
TLI GY L EA+ +FQ M E PN T +SILPA +H+GA+ G IH + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 477 NC--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
+ + T L+DMY KCG I+ A +F + S WNA+I +HG+ D +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
+ F +M G++PD ITFV LL+ACSHSG++ G+ F M +++ + P L+HYGCM+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
G +G A I M + PD IW +LL AC++HGN+ELG ++ L +++ EN G Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
VL+SNIYA+ G+W V + R+L D+G+KK PG SSIE+++ V F G++ HP+ +IY
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635
Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
L + ++ G+VPD S VLQ++EE+ KE L HSE+LAIAFG+IS+ P + + I
Sbjct: 636 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 695
Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
KNLRVC +CH TK IS+I +REII RD RFHHF+DG+CSC DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 246/484 (50%), Gaps = 41/484 (8%)
Query: 53 LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNF---YANLGDLSFSRHTFDHISYRN 109
L +C L ++ +HA ++ G T ++ +KL+ F + L ++ F I N
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIH 166
+ WN+M + A+ Y ++ GL P+ YTFP VLK+C + +G++IH
Sbjct: 99 LLIWNTMFRGHALSSDPVSALK-LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 167 CSVLKLGFEWDVFVAASLLHMYCR-------------------------------FGLAN 195
VLKLG + D++V SL+ MY + G
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 196 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
A+KLFD++PV+D SWNAMISGY ++GN EAL++ +M V D T+ +++ CA
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
+S +I G +HL+I HG NL + N LI++Y+K G + A +F+++ +DV+SWN+
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
+I Y N A F M ++G P+ +T++S+ A L R +H +I +R
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 376 WFMEDV-IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 434
+ + + +++DMYAK G I +A VF + K + SWN +I G+A +G A + ++
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMY 493
F M + I P+ T+V +L A SH G L G I + ++ + + C++D+
Sbjct: 458 FSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 494 GKCG 497
G G
Sbjct: 517 GHSG 520
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/704 (37%), Positives = 401/704 (56%), Gaps = 36/704 (5%)
Query: 152 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 209
+++ C +L K+ H +++ G D + A+ L M A++ ARK+FD++P +S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 210 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
+WN +I Y + V ++ LD + + T ++ A ++ G +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
VK + ++FV+N+LI+ Y G + A +VF + E+DVVSWNS+I + Q P
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
A F M+ ++ +T+V + S A++ + R V +I ++ + NA++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAML 274
Query: 389 DMYAKLGIINSACAVFEGL-------------------------------PVKDVISWNT 417
DMY K G I A +F+ + P KD+++WN
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
LI+ Y QNG +EA+ VF ++ + NQ T VS L A + VGAL G IH+ + K+
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 478 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 537
+ + V + L+ MY KCG ++ + +F V + W+A+I +HG G++A++ F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 538 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 597
+M + V+P+ +TF ++ ACSH+GLV E + FH M+ +GI P KHY C+VD+ GR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 598 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 657
+G+L A FI+ MP+ P S+WGALLGAC+IH N+ L +A RL E++ N G +VL+
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 658 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 717
SNIYA +GKWE V E+R R GLKK PG SSIE++ + F +G+ HP EK+Y +L
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Query: 718 RNLTAKMKSLGYVPDKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQIFKN 776
+ K+KS GY P+ S VLQ +EE+E KE L HSE+LAI +G+IS+ I++ KN
Sbjct: 635 HEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKN 694
Query: 777 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
LRVCGDCH+ K ISQ+ +REIIVRD RFHHF++G CSC D+W
Sbjct: 695 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/652 (27%), Positives = 305/652 (46%), Gaps = 72/652 (11%)
Query: 18 PLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSCTKLHHVKRLHALLVVSGKIK 77
PL P FS N Q P SR I L + C L +K+ H ++ +G
Sbjct: 9 PLSLPRHPNFS---NPNQ--PTTNNERSRHIS---LIERCVSLRQLKQTHGHMIRTGTFS 60
Query: 78 TVFSSTKLVNFYA--NLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQ 135
+S++KL A + L ++R FD I N + WN++I Y ++ F
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLD 120
Query: 136 FTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
S P+ YTFP ++KA +L G+ +H +K DVFVA SL+H Y G
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
+ A K+F + +D SWN+MI+G+ Q G+ +AL++ +M E V +T+ +L
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME----- 307
CA+ N+ G + YI ++ + NL ++N +++MY K G + A R+FD M E
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 308 --------------------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAG 340
+D+V+WN++I+AYEQ+ P A F +Q Q
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
++ + +TLVS S AQ+ R +H +I + G M + + +A++ MY+K G + +
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM-NFHVTSALIHMYSKCGDLEKS 419
Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
VF + +DV W+ +I G A +G +EA+++F M+E N + PN T+ ++ A SH
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN-VKPNGVTFTNVFCACSH 478
Query: 461 VGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF--YQVPRSSSVPW 517
G + + + ++ N + + C+VD+ G+ G ++ A+ +P S+SV W
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV-W 537
Query: 518 NAIISCHGIHGQGDKALNFFRQMLDEGVRPD--HITFVSLLTACSHSGLVSEGQRYFHMM 575
A++ IH + A ++L+ R D H+ ++ VSE +++ +
Sbjct: 538 GALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVT 597
Query: 576 QEEFGIKPHLKHYGCM---VDLFGRAGHLGMAHNFIQNMPVRP-DASIWGAL 623
G+K K GC +D GM H F+ P ++G L
Sbjct: 598 ----GLK---KEPGCSSIEID--------GMIHEFLSGDNAHPMSEKVYGKL 634
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/663 (39%), Positives = 372/663 (56%), Gaps = 40/663 (6%)
Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
+ +H ++ + + L+ Y ARK+FD++P R+ N MI Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
G E + + M V D T +L C+ S I+ G IH K GL LFV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
N L++MY K G + A V D+M RDVVSWNS++ Y Q+ A M+ I
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
D T+ SL V+ E+V+ V DM+ K+G
Sbjct: 239 HDAGTMASLLPAVSNTT------------------TENVMY---VKDMFFKMG------- 270
Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
K ++SWN +I Y +N + EA+E++ ME + P+ + S+LPA
Sbjct: 271 ------KKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSITSVLPACGDTS 323
Query: 463 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
AL G KIH + + L ++ + L+DMY KCG ++ A +F + V W A+IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
+G G+G A+ F ++ D G+ PD I FV+ L ACSH+GL+ EG+ F +M + + I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
P L+H CMVDL GRAG + A+ FIQ+M + P+ +WGALLGACR+H + ++G +A+D+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
LF++ E GYYVL+SNIYA G+WE V +R++ + +GLKK PG S++EVN + F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563
Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 762
G+R+HP+ ++IY EL L KMK LGYVPD L DVEE++KE L HSE+LAI F +
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFAL 623
Query: 763 ISSPPK-----SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 817
+++ + + I+I KNLR+CGDCH K ISQIT REII+RD+NRFH F+ G+CSCG
Sbjct: 624 MNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCG 683
Query: 818 DYW 820
DYW
Sbjct: 684 DYW 686
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 229/464 (49%), Gaps = 57/464 (12%)
Query: 84 KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
KL+ YA+L D++ +R FD I RNV N MI YV G E V F +R
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GCNVR 137
Query: 144 PDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 200
PD YTFP VLKAC +V G+KIH S K+G +FV L+ MY + G + AR +
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 201 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 260
D+M RD SWN+++ GY Q+ +AL++ EM +S D T+AS+LP + +
Sbjct: 198 LDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--- 254
Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
+ N+ MY K +F +M ++ +VSWN +I Y
Sbjct: 255 --------------------TTENV--MYVK--------DMFFKMGKKSLVSWNVMIGVY 284
Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
++ P+ A ++ M+ G +PD +++ S+ + + +HG+I R+ + +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK-LIPN 343
Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
+++ NA++DMYAK G + A VFE + +DV+SW +I+ Y +G +A+ +F +++
Sbjct: 344 LLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD 403
Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVAT-------CLVD 491
+ P+ +V+ L A SH G L +G ++C L D + T C+VD
Sbjct: 404 SGLV-PDSIAFVTTLAACSHAGLLEEG--------RSCFKLMTDHYKITPRLEHLACMVD 454
Query: 492 MYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKAL 534
+ G+ G++ +A + + W A++ +H D L
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/800 (33%), Positives = 428/800 (53%), Gaps = 78/800 (9%)
Query: 65 RLHALLVVSGKIKTVF--SSTKLVN----FYANLGDLSFSRHTFDHISYRNVYTWNSMIS 118
R L + G IK S T++V+ FY L F+ FD + R+ WN ++
Sbjct: 3 RFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 119 VYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFE 175
V +R G +AV+ F + SG + T +L+ C N +G++IH VL+LG E
Sbjct: 63 VNLRSGNWEKAVELFREMQF-SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 176 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 235
+V + SL+ MY R G ++RK+F+ M R+ SWN+++S Y + G +A+ +LDEM
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 236 RLEGVSMDPIT-----------------------------------VASILPVCARSDNI 260
+ G+ D +T ++S+L A ++
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 261 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAY 320
G IH YI+++ L ++++V LI+MY K G + +A VFD M +++V+WNS+++
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
+ A M++ GI+PD +T SL S A L + V G + +G
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG----- 356
Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
+V+SW + +G ++NG A++VF M+E
Sbjct: 357 ---------------------------VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE 389
Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
+ PN T ++L + L G ++H ++ L D +VAT LVDMYGK G +
Sbjct: 390 -EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
A+ +F+ + S WN ++ + + G+G++ + F ML+ G+ PD ITF S+L+ C
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
+SGLV EG +YF +M+ +GI P ++H CMVDL GR+G+L A +FIQ M ++PDA+IW
Sbjct: 509 NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIW 568
Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
GA L +C+IH ++EL +A RL ++ N Y++M N+Y+N+ +WE V+ +R+L R+
Sbjct: 569 GAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
++ WS I+++ V IFY +THP IY EL L ++MK GYVPD S + QD+
Sbjct: 629 RVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDI 688
Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
+ EKE +L H+E+LA+ +G+I +PI++ KN +C D H K++S + REI++
Sbjct: 689 SDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVL 748
Query: 801 RDSNRFHHFKDGICSCGDYW 820
++ R HHF+DG CSC D W
Sbjct: 749 QEGARVHHFRDGKCSCNDSW 768
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 231/530 (43%), Gaps = 101/530 (19%)
Query: 53 LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
L Q C+ +++H ++ G V L+ Y+ G L SR F+ + RN
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLK--ACRNLVD------ 161
+ +WNS++S Y + G + +A+ + + GL+PD T+ +L A + L
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEIC-GLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 162 ------------------------------GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
GK IH +L+ +DV+V +L+ MY +
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
G AR +FD M ++ +WN+++SG + +A ++ M EG+ D IT
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW---- 329
Query: 252 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMER--- 308
N+L + YA G AL V +M E+
Sbjct: 330 -------------------------------NSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 309 -DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSV 367
+VVSW +I + ++ + A F MQ+ G+ P+ T+ +L I+ L+ + + V
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 368 HGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGL 427
HGF +R+ + D + A+VDMY K G + SA +F G+ K + SWN ++ GYA G
Sbjct: 419 HGFCLRKN-LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 428 ASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK----IHAR-----VIKNC 478
E I F +M E + P+ T+ S+L + G +++G K + +R I++C
Sbjct: 478 GEEGIAAFSVMLEAG-MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 479 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIH 527
+C+VD+ G+ G +D+A + + + W A +S IH
Sbjct: 537 --------SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/613 (40%), Positives = 366/613 (59%), Gaps = 10/613 (1%)
Query: 213 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 272
N +I C+ G +A+ +L + S T ++ C ++ L +H +I+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
+G + + F++ LI MY+ G + +A +VFD+ +R + WN++ A + G
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 333 FTTMQQAGIQPDLLTLV-SLTSIVAQ---LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
+ M + G++ D T L + VA +N + +H + RRG + V I +V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG-YSSHVYIMTTLV 224
Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPN 447
DMYA+ G ++ A VF G+PV++V+SW+ +I YA+NG A EA+ F +MM E + +PN
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 507
T VS+L A + + AL QG IH +++ L + V + LV MYG+CG+++ +F
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 508 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 567
++ V WN++IS +G+HG G KA+ F +ML G P +TFVS+L ACSH GLV E
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 568 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 627
G+R F M + GIKP ++HY CMVDL GRA L A +Q+M P +WG+LLG+C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 628 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 687
RIHGN+EL AS RLF ++ +N G YVL+++IYA W+ V V+ L RGL+K PG
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Query: 688 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 747
+EV K+ F + + +P E+I+ L L MK GY+P VL ++E +EKE
Sbjct: 525 RCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584
Query: 748 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 807
I+ HSE+LA+AFG+I++ PI+I KNLR+C DCH +TKFIS+ E+EI+VRD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644
Query: 808 HFKDGICSCGDYW 820
FK+G+CSCGDYW
Sbjct: 645 RFKNGVCSCGDYW 657
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 178/351 (50%), Gaps = 26/351 (7%)
Query: 13 LCKLLPLLQAHRPLFSAAANSLQISPDCLENESREIDFDDLFQSC---TKLHHVKRLHAL 69
LCK L QA R L ++ S Q ++ L C + L R+H
Sbjct: 56 LCKEGKLKQAIRVLSQESSPSQQT-------------YELLILCCGHRSSLSDALRVHRH 102
Query: 70 LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
++ +G + F +TKL+ Y++LG + ++R FD R +Y WN++ G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKAC-------RNLVDGKKIHCSVLKLGFEWDVFVAA 182
+ +++ G+ D +T+ VLKAC +L+ GK+IH + + G+ V++
Sbjct: 163 LGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 183 SLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSM 242
+L+ MY RFG + A +F MPVR+ SW+AMI+ Y ++G A EAL EM E
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDS 281
Query: 243 DP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
P +T+ S+L CA + G LIH YI++ GL+ L V + L+ MY + G + R
Sbjct: 282 SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
VFD+M +RDVVSWNS+I++Y A F M G P +T VS+
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
K +HA L G V+ T LV+ YA G + ++ + F + RNV +W++MI+ Y +
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261
Query: 124 GRLSEAVDCFYQFTL-TSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVF 179
G+ EA+ F + T P+ T VL+AC +L GK IH +L+ G + +
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321
Query: 180 VAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEG 239
V ++L+ MY R G V +++FD M RD SWN++IS Y G +A+ I +EM G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 240 VSMDPITVASILPVCARSDNILSG-LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 298
S P+T S+L C+ + G L HG++ + ++++ + + A
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
Query: 299 LR-VFDQMMERDVVSWNSIIAA 319
+ V D E W S++ +
Sbjct: 442 AKMVQDMRTEPGPKVWGSLLGS 463
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/727 (34%), Positives = 399/727 (54%), Gaps = 72/727 (9%)
Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
+ H +LK G + D +++A L+ Y + N A + +P S++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
+++ + M G+ D + ++ VCA G IH GL+ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVV-------------------------------- 311
++ +MY + G M A +VFD+M ++DVV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 312 ---SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 368
SWN I++ + +S A F + G PD +T+ S+ V R +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLG-------------------------------II 397
G+++++G + +I +A++DMY K G ++
Sbjct: 276 GYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 398 NSACAVFEGLPVK----DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 453
+ A +FE + +V+SW ++I G AQNG EA+E+F+ M+ + PN T S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNHVTIPS 393
Query: 454 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 513
+LPA ++ AL G H ++ L +V V + L+DMY KCGRI+ + +F +P +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 514 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
V WN++++ +HG+ + ++ F ++ ++PD I+F SLL+AC GL EG +YF
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 574 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 633
MM EE+GIKP L+HY CMV+L GRAG L A++ I+ MP PD+ +WGALL +CR+ N+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 634 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 693
+L +A+++LF ++ EN G YVL+SNIYA G W VD +R+ GLKK PG S I+V
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 694 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 753
N+V G+++HP+ ++I +++ ++ +M+ G+ P+ F L DVEE E+E +L HS
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHS 693
Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
E+LA+ FG++++P +P+Q+ KNLR+CGDCH KFIS REI +RD+NRFHHFKDGI
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753
Query: 814 CSCGDYW 820
CSCGD+W
Sbjct: 754 CSCGDFW 760
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/753 (34%), Positives = 418/753 (55%), Gaps = 84/753 (11%)
Query: 147 YTFPPVLKACRNLVDGKKIHCSVLKLGF---------EWDVFVAASLLHMYCRFGLANVA 197
+ F P L+D ++C +L + E D +++ YC G +A
Sbjct: 43 FGFQPRAHILNRLID---VYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 198 RKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
R +F+ PV RD+ +NAMI+G+ + + A+++ +M+ EG D T AS+L A
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 256 R-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG----MMRHALRVFDQMMERDV 310
+D+ + H +K G + VSN L+++Y+K ++ A +VFD+++E+D
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 311 VSWNSIIAAYEQS----------------------NDPITAH---GFFTT-------MQQ 338
SW +++ Y ++ N I+ + GF+ M
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
+GI+ D T S+ A + + VH +++RR F N++V +Y K G +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFD 337
Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN------------- 445
A A+FE +P KD++SWN L++GY +G EA +F+ M+E N ++
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 446 -----------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 488
P + + + + +GA G + HA+++K +
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 489 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 548
L+ MY KCG +++A +F +P SV WNA+I+ G HG G +A++ + +ML +G+RPD
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 549 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 608
IT +++LTACSH+GLV +G++YF M+ + I P HY ++DL R+G A + I
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 609 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 668
+++P +P A IW ALL CR+HGNMELG +A+D+LF + E+ G Y+L+SN++A G+WE
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWE 637
Query: 669 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 728
V VR L RDRG+KK S IE+ +V F + +HP+ E +Y L++L +M+ LG
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Query: 729 YVPDKSFVLQDVEED-EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
YVPD SFVL DVE D KE +LT+HSE++A+AFG++ PP + I+IFKNLR CGDCHN+
Sbjct: 698 YVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFF 757
Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
+F+S + +R+II+RD RFHHF++G CSCG++W
Sbjct: 758 RFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 150/612 (24%), Positives = 283/612 (46%), Gaps = 91/612 (14%)
Query: 52 DLFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH--ISYRN 109
D++ ++L++ ++L + KI + T +V+ Y GD++ +R F+ + R+
Sbjct: 57 DVYCKSSELNYARQLFDEISEPDKI----ARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKK----I 165
+N+MI+ + A++ F + G +PD +TF VL + D +K
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMK-HEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFG----LANVARKLFDDMPVRDSGSWNAMISGYCQ 221
H + LK G + V+ +L+ +Y + L + ARK+FD++ +D SW M++GY +
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 222 SG---------------------NAV-----------EALDILDEMRLEGVSMDPITVAS 249
+G NA+ EAL+++ M G+ +D T S
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
++ CA + + G +H Y+++ +F+ N+L+++Y K G A +F++M +D
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 310 VVSWNSIIAAYEQSN------------------------DPITAHGF-------FTTMQQ 338
+VSWN++++ Y S + +GF F+ M++
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
G +P A L N + H +++ G F + GNA++ MYAK G++
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG-FDSSLSAGNALITMYAKCGVVE 469
Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
A VF +P D +SWN LI Q+G +EA++V++ M + I P++ T +++L A
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK-KGIRPDRITLLTVLTAC 528
Query: 459 SHVGALRQGIKIH---ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSS 514
SH G + QG K V + D + L+D+ + G+ DA S+ +P + ++
Sbjct: 529 SHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHI-TFVSLLTACSHSGLVSEGQRYFH 573
W A++S +HG + + ++ G+ P+H T++ L + +G E R
Sbjct: 587 EIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644
Query: 574 MMQEEFGIKPHL 585
+M++ G+K +
Sbjct: 645 LMRDR-GVKKEV 655
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 196/478 (41%), Gaps = 111/478 (23%)
Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME------------------ 307
+H I+ G + + N LI++Y K + +A ++FD++ E
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 308 ---------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
RD V +N++I + +ND +A F M+ G +PD T S+
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 353 SIVAQL-NDCRNSRSVHGFIMRRG-WFMEDVIIGNAVVDMYAKLG----IINSACAVFEG 406
+ +A + +D + H ++ G ++ V NA+V +Y+K +++SA VF+
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSV--SNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 407 LPVKDVISWNTLITGYAQN--------------------------------GLASEAIEV 434
+ KD SW T++TGY +N G EA+E+
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 435 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 494
+ M I ++ TY S++ A + G L+ G ++HA V++ F LV +Y
Sbjct: 274 VRRMVSSG-IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYY 331
Query: 495 KCGRIDDAMSLFYQVPRSSSVPWNAIISCH------------------------------ 524
KCG+ D+A ++F ++P V WNA++S +
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 525 -GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 583
+G G++ L F M EG P F + +C+ G GQ+Y H + G
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKIGFDS 450
Query: 584 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
L ++ ++ + G + A + MP D+ W AL+ A HG+ GA A D
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGH---GAEAVD 504
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 37/256 (14%)
Query: 44 ESREIDFDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRH 100
E E + + ++C L K++HA ++ F ++ LV+ Y G +R
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS-LVSLYYKCGKFDEARA 341
Query: 101 TFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFT---------LTSGL--------- 142
F+ + +++ +WN+++S YV G + EA F + + SGL
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 143 ------------RPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHM 187
P Y F +K+C L +G++ H +LK+GF+ + +L+ M
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 188 YCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 247
Y + G+ AR++F MP DS SWNA+I+ Q G+ EA+D+ +EM +G+ D IT+
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 248 ASILPVCARSDNILSG 263
++L C+ + + G
Sbjct: 522 LTVLTACSHAGLVDQG 537
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 87/391 (22%)
Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
+R+VHG I+ G F I N ++D+Y K +N A +F+ + D I+ T+++GY
Sbjct: 33 ARAVHGNIITFG-FQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91
Query: 424 QNGLASEAIEVFQMMEEC---------------------NEIN-----------PNQGTY 451
+G + A VF+ C + IN P+ T+
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 452 VSILPAYSHVG-ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR----IDDAMSLF 506
S+L + V +Q ++ HA +K+ + V+ LV +Y KC + A +F
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 507 YQVPRSSSVPW--------------------------------NAIISCHGIHGQGDKAL 534
++ W NA+IS + G +AL
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY--FHMMQEEFGIKPHLKHY-GCM 591
R+M+ G+ D T+ S++ AC+ +GL+ G++ + + +E+F H+ +
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSL 326
Query: 592 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF--EVDSE 649
V L+ + G A + MP + D W ALL G + G + +L E+ +
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS-----GYVSSGHIGEAKLIFKEMKEK 380
Query: 650 NV-GYYVLMSNIYANVGKWEGVDEVRSLARD 679
N+ + +++S + N EG+ + R+
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/586 (40%), Positives = 362/586 (61%), Gaps = 5/586 (0%)
Query: 237 LEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 294
LEG + D ++L C ++ G ++H +I++ ++ + N L+NMYAK G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 295 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 354
+ A +VF++M +RD V+W ++I+ Y Q + P A FF M + G P+ TL S+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 355 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 414
A +HGF ++ G F +V +G+A++D+Y + G+++ A VF+ L ++ +S
Sbjct: 171 AAAERRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 415 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 474
WN LI G+A+ +A+E+FQ M + P+ +Y S+ A S G L QG +HA +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 475 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 534
IK+ F L+DMY K G I DA +F ++ + V WN++++ + HG G +A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 535 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 594
+F +M G+RP+ I+F+S+LTACSHSGL+ EG Y+ +M+++ GI P HY +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 595 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 654
GRAG L A FI+ MP+ P A+IW ALL ACR+H N ELGA A++ +FE+D ++ G +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 655 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 714
V++ NIYA+ G+W VR ++ G+KK P S +E+ N + +F + HP+ E+I
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Query: 715 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 774
+ + AK+K LGYVPD S V+ V++ E+E L HSE++A+AF ++++PP S I I
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587
Query: 775 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
KN+RVCGDCH K S++ REIIVRD+NRFHHFKDG CSC DYW
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 221/447 (49%), Gaps = 41/447 (9%)
Query: 50 FDDLFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
++ L + CT L + +HA ++ S + L+N YA G L +R F+ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
R+ TW ++IS Y + R +A+ F+ L G P+ +T V+KA R G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDAL-LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
++H +K GF+ +V V ++LL +Y R+GL + A+ +FD + R+ SWNA+I+G+ +
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
+AL++ M +G + AS+ C+ + + G +H Y++K G + F N
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
L++MYAK G + A ++FD++ +RDVVSWNS++ AY Q A +F M++ GI+P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-----FMEDVIIGNA-----VVDMYAK 393
+ ++ +S+ + + H ++ GW +D I+ A VVD+ +
Sbjct: 362 NEISFLSVLTACS-----------HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 394 LGIINSACAVFEGLPVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQ 448
G +N A E +P++ + W L+ + L + A E VF E++P+
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVF-------ELDPDD 463
Query: 449 -GTYVSILPAYSHVGALRQGIKIHARV 474
G +V + Y+ G ++ ++
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKM 490
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/679 (36%), Positives = 390/679 (57%), Gaps = 11/679 (1%)
Query: 152 VLKAC--RNLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
+L+ C + L D G ++HC +LK G ++ + L+ MYC+ +A K+FD MP R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
SW+A++SG+ +G+ +L + EM +G+ + T ++ L C + + GL IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
+ +K G E + V N+L++MY+K G + A +VF ++++R ++SWN++IA + +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 329 AHGFFTTMQQAGIQ--PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM-EDVIIGN 385
A F MQ+A I+ PD TL SL + + +HGF++R G+ I
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 386 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 445
++VD+Y K G + SA F+ + K +ISW++LI GYAQ G EA+ +F+ ++E N
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-Q 310
Query: 446 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 505
+ SI+ ++ LRQG ++ A +K + V +VDMY KCG +D+A
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 506 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
F ++ + W +I+ +G HG G K++ F +ML + PD + ++++L+ACSHSG++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
EG+ F + E GIKP ++HY C+VDL GRAG L A + I MP++P+ IW LL
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 626 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 685
CR+HG++ELG L +D++N YV+MSN+Y G W R L +GLKK
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Query: 686 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDE 744
G S +E+ +V F +G +HP I + L+ +++ LGYV L D++++
Sbjct: 551 AGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDES 610
Query: 745 KEHILTSHSERLAIAFGIIS---SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
KE L +HSE+LAI + + + I++FKNLRVC DCH + K +S+IT+ +VR
Sbjct: 611 KEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVR 670
Query: 802 DSNRFHHFKDGICSCGDYW 820
D+ RFH F+DG CSCGDYW
Sbjct: 671 DAVRFHSFEDGCCSCGDYW 689
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 255/473 (53%), Gaps = 12/473 (2%)
Query: 65 RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
++H L+ SG + +S L++ Y + + FD + RNV +W++++S +V G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVA 181
L ++ F + G+ P+ +TF LKAC L G +IH LK+GFE V V
Sbjct: 87 DLKGSLSLFSEMG-RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVG 145
Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
SL+ MY + G N A K+F + R SWNAMI+G+ +G +ALD M+ +
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 242 MDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLE--FNLFVSNNLINMYAKFGMMRH 297
P T+ S+L C+ + I +G IH ++V+ G + ++ +L+++Y K G +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
A + FDQ+ E+ ++SW+S+I Y Q + + A G F +Q+ Q D L S+ + A
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
R + + ++ +E ++ N+VVDMY K G+++ A F + +KDVISW
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK- 476
+ITGY ++GL +++ +F M N I P++ Y+++L A SH G +++G ++ +++++
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHN-IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 477 NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHG 528
+ + V C+VD+ G+ GR+ +A L +P +V W ++S +HG
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 207/409 (50%), Gaps = 11/409 (2%)
Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
+ SIL VC R G +H Y++K G NL SN LI+MY K A +VFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
ER+VVSW+++++ + + D + F+ M + GI P+ T + LN
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
+HGF ++ G+ M V +GN++VDMY+K G IN A VF + + +ISWN +I G+ G
Sbjct: 129 IHGFCLKIGFEMM-VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 427 LASEAIEVFQMMEECN-EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-C-FDV 483
S+A++ F MM+E N + P++ T S+L A S G + G +IH ++++ C
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 484 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 543
+ LVD+Y KCG + A F Q+ + + W+++I + G+ +A+ F+++ +
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 544 GVRPDHITFVSLLTACSHSGLVSEGQRYFHM-MQEEFGIKPHLKHYGCMVDLFGRAGHLG 602
+ D S++ + L+ +G++ + ++ G++ + +VD++ + G +
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVD 365
Query: 603 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 651
A M ++ D W ++ HG LG + +E+ N+
Sbjct: 366 EAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNI 410
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 196/426 (46%), Gaps = 12/426 (2%)
Query: 47 EIDFDDLFQSCTKLHHVKR---LHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFD 103
E F ++C L+ +++ +H + G V LV+ Y+ G ++ + F
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
Query: 104 HISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRN---L 159
I R++ +WN+MI+ +V G S+A+D F + RPD +T +LKAC + +
Sbjct: 167 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226
Query: 160 VDGKKIHCSVLKLGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 217
GK+IH +++ GF + SL+ +Y + G ARK FD + + SW+++I
Sbjct: 227 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 218 GYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF 277
GY Q G VEA+ + ++ +D ++SI+ V A + G + VK
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ 337
V N++++MY K G++ A + F +M +DV+SW +I Y + + F M
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 338 QAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGII 397
+ I+PD + +++ S + + + ++ V VVD+ + G +
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 398 NSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 456
A + + +P+K +V W TL++ +G EV +++ + NP YV +
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP--ANYVMMSN 524
Query: 457 AYSHVG 462
Y G
Sbjct: 525 LYGQAG 530
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/680 (37%), Positives = 378/680 (55%), Gaps = 42/680 (6%)
Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG---NAVEALD 230
F W+ +LL Y + GL + F+ +P RD +WN +I GY SG AV+A +
Sbjct: 73 FSWN-----NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN 127
Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
+ MR ++ +T+ ++L + + + ++ G IH ++K G E L V + L+ MYA
Sbjct: 128 TM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 291 KFGMMRHALRVFDQM------------------------------MERDVVSWNSIIAAY 320
G + A +VF + ME+D VSW ++I
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 321 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 380
Q+ A F M+ G++ D S+ L + +H I+R F +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDH 304
Query: 381 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 440
+ +G+A++DMY K ++ A VF+ + K+V+SW ++ GY Q G A EA+++F M+
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 441 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 500
I+P+ T + A ++V +L +G + H + I + L V V+ LV +YGKCG ID
Sbjct: 365 SG-IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 501 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 560
D+ LF ++ +V W A++S + G+ + + F +M+ G++PD +T +++ACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 561 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 620
+GLV +GQRYF +M E+GI P + HY CM+DLF R+G L A FI MP PDA W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 621 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 680
LL ACR GN+E+G A++ L E+D + Y L+S+IYA+ GKW+ V ++R R++
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 681 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 740
+KK PG S I+ K+ F + + P ++IY +L L K+ GY PD SFV DV
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663
Query: 741 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 800
EE K +L HSERLAIAFG+I P PI++ KNLRVC DCHN TK IS +T REI+V
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723
Query: 801 RDSNRFHHFKDGICSCGDYW 820
RD+ RFH FKDG CSCGD+W
Sbjct: 724 RDAVRFHRFKDGTCSCGDFW 743
Score = 213 bits (541), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 245/527 (46%), Gaps = 68/527 (12%)
Query: 62 HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYV 121
+VK +H ++ + F +V+ YA + +++R FD I N+++WN+++ Y
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 122 RCGRLSEAVDCFYQFTLTSGL----------------------------------RPDFY 147
+ G +SE F + G+ R
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 148 TFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF---DDM 204
T + + ++ GK+IH V+KLGFE + V + LL+MY G + A+K+F DD
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 205 PV---------------------------RDSGSWNAMISGYCQSGNAVEALDILDEMRL 237
+DS SW AMI G Q+G A EA++ EM++
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 238 EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH 297
+G+ MD S+LP C I G IH I++ + +++V + LI+MY K + +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 298 ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 357
A VFD+M +++VVSW +++ Y Q+ A F MQ++GI PD TL S A
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 358 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 417
++ HG + G + V + N++V +Y K G I+ + +F + V+D +SW
Sbjct: 384 VSSLEEGSQFHGKAITSG-LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 477
+++ YAQ G A E I++F M + + + P+ T ++ A S G + +G + +
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 478 -CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
+ + +C++D++ + GR+++AM +P ++ W ++S
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 208/444 (46%), Gaps = 39/444 (8%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
K++H ++ G + + L+ YAN+G +S ++ F + RN +NS++ + C
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 124 GRLS------------------------------EAVDCFYQFTLTSGLRPDFYTFPPVL 153
G + EA++CF + + GL+ D Y F VL
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV-QGLKMDQYPFGSVL 277
Query: 154 KACRNLV---DGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
AC L +GK+IH +++ F+ ++V ++L+ MYC+ + A+ +FD M ++
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
SW AM+ GY Q+G A EA+ I +M+ G+ D T+ + CA ++ G H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
+ GL + VSN+L+ +Y K G + + R+F++M RD VSW ++++AY Q +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 331 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 390
F M Q G++PD +TL + S ++ + + + + + ++D+
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 391 YAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 449
+++ G + A G+P D I W TL++ G + + E + +P
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 450 TYVSILPA----YSHVGALRQGIK 469
T +S + A + V LR+G++
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMR 601
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 39/399 (9%)
Query: 278 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA-HGFFTTM 336
NLF NNL+ Y+K G++ F+++ +RD V+WN +I Y S A + T M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 337 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 396
+ +TL+++ + + + +HG +++ G F +++G+ ++ MYA +G
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYANVGC 189
Query: 397 INSACAVFEGLP------------------------------VKDVISWNTLITGYAQNG 426
I+ A VF GL KD +SW +I G AQNG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
LA EAIE F+ M + + +Q + S+LPA +GA+ +G +IHA +I+ ++V
Sbjct: 250 LAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
+ L+DMY KC + A ++F ++ + + V W A++ +G G+ ++A+ F M G+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
PDH T ++AC++ + EG + FH G+ ++ +V L+G+ G + +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 645
M VR DA W A++ A G AV + +LF+
Sbjct: 428 LFNEMNVR-DAVSWTAMVSAYAQFGR----AVETIQLFD 461
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 66/328 (20%)
Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 418
N R + +HG I+R + E + N +V YA + A VF+ +P ++ SWN L
Sbjct: 20 NQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALMKSSTYARRVFDRIPQPNLFSWNNL 78
Query: 419 ITGYAQNGLASE-------------------------------AIEVFQMMEECNEINPN 447
+ Y++ GL SE A++ + M N
Sbjct: 79 LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK------------ 495
+ T +++L S G + G +IH +VIK + V + L+ MY
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 496 -------------------CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 536
CG I+DA+ LF + + SV W A+I +G +A+
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 537 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 596
FR+M +G++ D F S+L AC G ++EG++ H + H+ ++D++
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ-IHACIIRTNFQDHIYVGSALIDMYC 316
Query: 597 RAGHLGMAHNFIQNMPVRPDASIWGALL 624
+ L A M + S W A++
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVS-WTAMV 343
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 58 TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMI 117
+ L + H + SG I V S LV Y GD+ S F+ ++ R+ +W +M+
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMV 444
Query: 118 SVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR--NLVDGKKIHCSVL--KLG 173
S Y + GR E + F + + GL+PD T V+ AC LV+ + + ++ + G
Sbjct: 445 SAYAQFGRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 174 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQSGN------AV 226
+ + ++ ++ R G A + + MP D+ W ++S GN A
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 227 EALDILDEMRLEGVSM 242
E+L LD G ++
Sbjct: 564 ESLIELDPHHPAGYTL 579
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/577 (39%), Positives = 346/577 (59%), Gaps = 5/577 (0%)
Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
V+S++ +I L+H +VK + F+ + L+ Y + G A ++FD+M
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQLNDCRNS 364
ERD+VSWNS+I+ Y + M + G +P+ +T +S+ S
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 365 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 424
R +HG +M+ G +E+V + NA ++ Y K G + S+C +FE L +K+++SWNT+I + Q
Sbjct: 154 RCIHGLVMKFG-VLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 425 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 484
NGLA + + F M P+Q T++++L + +G +R IH ++ +
Sbjct: 213 NGLAEKGLAYFNMSRRVGH-EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 485 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 544
+ T L+D+Y K GR++D+ ++F+++ S+ W A+++ + HG G A+ F M+ G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 545 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 604
+ PDH+TF LL ACSHSGLV EG+ YF M + + I P L HY CMVDL GR+G L A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 605 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 664
+ I+ MP+ P + +WGALLGACR++ + +LG A++RLFE++ + YV++SNIY+
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 665 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 724
G W+ +R+L + +GL + G S IE NK+ F G+ +HP+ EKI +L+ + KM
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 725 KS-LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDC 783
KS +GY FVL DV ED KE ++ HSE++A+AFG++ P PI I KNLR+CGDC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 784 HNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
H K IS I +R II+RDS RFHHF DG CSC DYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 218/449 (48%), Gaps = 9/449 (2%)
Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 194
Q + L + + +K+C ++ + +HC V+K F+ L+ Y R G
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 195 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILP 252
A KLFD+MP RD SWN++ISGY G + ++L M + V P +T S++
Sbjct: 83 VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 253 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
C + G IH ++K G+ + V N IN Y K G + + ++F+ + +++VS
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 372
WN++I + Q+ +F ++ G +PD T +++ + R ++ +HG IM
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 373 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 432
G F + I A++D+Y+KLG + + VF + D ++W ++ YA +G +AI
Sbjct: 263 -FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 433 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV--ATCLV 490
+ F++M I+P+ T+ +L A SH G + +G K + + D + +C+V
Sbjct: 322 KHFELMVHYG-ISPDHVTFTHLLNACSHSGLVEEG-KHYFETMSKRYRIDPRLDHYSCMV 379
Query: 491 DMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 549
D+ G+ G + DA L ++P SS W A++ ++ ++ + R D
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR-DG 438
Query: 550 ITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
+V L S SGL + R ++M+++
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 192/431 (44%), Gaps = 27/431 (6%)
Query: 55 QSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWN 114
+SC + + LH +V S + F +LV Y LG + FD + R++ +WN
Sbjct: 42 KSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWN 101
Query: 115 SMISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKAC---RNLVDGKKIHCSVL 170
S+IS Y G L + + + ++ G RP+ TF ++ AC + +G+ IH V+
Sbjct: 102 SLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVM 161
Query: 171 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 230
K G +V V + ++ Y + G + KLF+D+ +++ SWN MI + Q+G A + L
Sbjct: 162 KFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLA 221
Query: 231 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 290
+ R G D T ++L C + IH I+ G N ++ L+++Y+
Sbjct: 222 YFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYS 281
Query: 291 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 350
K G + + VF ++ D ++W +++AAY A F M GI PD +T
Sbjct: 282 KLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTH 341
Query: 351 LTSIVAQLNDCRNSRSV----HGFIMRRGWFMEDVIIG--NAVVDMYAKLGIINSACAVF 404
L LN C +S V H F + D + + +VD+ + G++ A +
Sbjct: 342 L------LNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395
Query: 405 EGLPVKDVIS-WNTLITG---YAQNGLASEAIEVFQMMEECNEINPNQG-TYVSILPAYS 459
+ +P++ W L+ Y L ++A E E+ P G YV + YS
Sbjct: 396 KEMPMEPSSGVWGALLGACRVYKDTQLGTKA------AERLFELEPRDGRNYVMLSNIYS 449
Query: 460 HVGALRQGIKI 470
G + +I
Sbjct: 450 ASGLWKDASRI 460
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/601 (38%), Positives = 362/601 (60%), Gaps = 7/601 (1%)
Query: 220 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 279
C + A+ +D ++ G+ D T + ++ C + + G LI ++ +G +
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 280 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 339
F+ N LINMY KF ++ A ++FDQM +R+V+SW ++I+AY + A M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 340 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 399
++P++ T +S++ N + R +H I++ G DV + +A++D++AKLG
Sbjct: 157 NVRPNVYTY---SSVLRSCNGMSDVRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPED 212
Query: 400 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
A +VF+ + D I WN++I G+AQN + A+E+F+ M+ I Q T S+L A +
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACT 271
Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
+ L G++ H ++K D+ + LVDMY KCG ++DA+ +F Q+ + W+
Sbjct: 272 GLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 520 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
+IS +G +AL F +M G +P++IT V +L ACSH+GL+ +G YF M++ +
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
GI P +HYGCM+DL G+AG L A + M PDA W LLGACR+ NM L A
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449
Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
+ ++ +D E+ G Y L+SNIYAN KW+ V+E+R+ RDRG+KK PG S IEVN ++
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509
Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
F G+ +HP+ ++ +L L ++ +GYVP+ +FVLQD+E ++ E L HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569
Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
FG+++ P + I+I KNLR+CGDCH + K S++ R I++RD R+HHF+DG CSCGDY
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629
Query: 820 W 820
W
Sbjct: 630 W 630
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 189/362 (52%), Gaps = 26/362 (7%)
Query: 70 LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEA 129
L +G +F L+N Y L+ + FD + RNV +W +MIS Y +C +A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 130 VDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 189
++ L +RP+ YT+ VL++C + D + +HC ++K G E DVFV ++L+ ++
Sbjct: 147 LELLV-LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 190 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 249
+ G A +FD+M D+ WN++I G+ Q+ + AL++ M+ G + T+ S
Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 250 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 309
+L C + G+ H++IVK+ + +L ++N L++MY K G + ALRVF+QM ERD
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 310 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 369
V++W+++I+ Q+ A F M+ +G +P+ +T IV L C H
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT------IVGVLFACS-----HA 372
Query: 370 FIMRRGWF----MEDVIIGNAV-------VDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
++ GW+ M+ + + V +D+ K G ++ A + + + D ++W T
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 418 LI 419
L+
Sbjct: 433 LL 434
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 366/633 (57%), Gaps = 9/633 (1%)
Query: 191 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 250
F L + + F P IS C +G EAL EM + G M ++
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDAL 58
Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
L C + G +H +++K ++ L+ Y K + A +V D+M E++V
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 311 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 370
VSW ++I+ Y Q+ A F M ++ +P+ T ++ + + + + +HG
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 371 IMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 429
I++ W + + +G++++DMYAK G I A +FE LP +DV+S +I GYAQ GL
Sbjct: 179 IVK--WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 430 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 489
EA+E+F + ++PN TY S+L A S + L G + H V++ L F + L
Sbjct: 237 EALEMFHRLHS-EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 490 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPD 548
+DMY KCG + A LF +P +++ WNA++ + HG G + L FR M DE V+PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 549 HITFVSLLTACSHSGLVSEGQRYFH-MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 607
+T +++L+ CSH + G F M+ E+G KP +HYGC+VD+ GRAG + A F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 608 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 667
I+ MP +P A + G+LLGACR+H ++++G RL E++ EN G YV++SN+YA+ G+W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 668 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 727
V+ VR++ + + K PG S I+ + F+ +RTHP+ E++ +++ ++ KMK
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 728 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 787
GYVPD S VL DV+E++KE +L HSE+LA+ FG+I++ PI++FKNLR+C DCHN+
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 788 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
K S++ ERE+ +RD NRFH DGICSCGDYW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 214/417 (51%), Gaps = 32/417 (7%)
Query: 111 YTWNSMISVYVRC--GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKI 165
Y +++ + C GRL EA+ G F+ + +L AC R L DG+++
Sbjct: 19 YVLQTILPISQLCSNGRLQEALLEMAMLGPEMG----FHGYDALLNACLDKRALRDGQRV 74
Query: 166 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 225
H ++K + ++ LL Y + ARK+ D+MP ++ SW AMIS Y Q+G++
Sbjct: 75 HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 134
Query: 226 VEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNL 285
EAL + EM + T A++L C R+ + G IH IVK + ++FV ++L
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL 194
Query: 286 INMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDL 345
++MYAK G ++ A +F+ + ERDVVS +IIA Y Q A F + G+ P+
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 346 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 405
+T SL + ++ L + + H ++RR ++ N+++DMY+K G ++ A +F+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYARRLFD 313
Query: 406 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 465
+P + ISWN ++ GY+++GL E +E+F++M + + P+ T +++L SH
Sbjct: 314 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMED 373
Query: 466 QGIKIHARVIKNCLCFDVFVA------------TCLVDMYGKCGRIDDAMSLFYQVP 510
G+ I FD VA C+VDM G+ GRID+A ++P
Sbjct: 374 TGLNI----------FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 212/433 (48%), Gaps = 34/433 (7%)
Query: 50 FDDLFQSC---TKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
+D L +C L +R+HA ++ + + + T+L+ FY L +R D +
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGK 163
+NV +W +MIS Y + G SEA+ F + + G +P+ +TF VL +C L GK
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGK 173
Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
+IH ++K ++ +FV +SLL MY + G AR++F+ +P RD S A+I+GY Q G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
EAL++ + EG+S + +T AS+L + + G H ++++ L F + N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQ 342
+LI+MY+K G + +A R+FD M ER +SWN+++ Y + F M+ + ++
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA------------VVDM 390
PD +TL+++ L+ C HG + G + D ++ +VDM
Sbjct: 354 PDAVTLLAV------LSGCS-----HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 391 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQG 449
+ G I+ A + +P K + G + L+ + E + EI P N G
Sbjct: 403 LGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE--SVGRRLIEIEPENAG 460
Query: 450 TYVSILPAYSHVG 462
YV + Y+ G
Sbjct: 461 NYVILSNLYASAG 473
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/602 (39%), Positives = 362/602 (60%), Gaps = 44/602 (7%)
Query: 256 RSDNILSGLLIHLYIVKHGLEFNL---FVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 312
+S ++ L IH I++H L + ++ L YA G +RH+L +F Q ++ D+
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 313 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC--RNSRSVHGF 370
+ + I + A + + + I P+ T SL L C ++ + +H
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSL------LKSCSTKSGKLIHTH 151
Query: 371 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-------------------- 410
+++ G + D + +VD+YAK G + SA VF+ +P +
Sbjct: 152 VLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 411 -----------DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 459
D++SWN +I GYAQ+G ++A+ +FQ + + P++ T V+ L A S
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 460 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 519
+GAL G IH V + + +V V T L+DMY KCG +++A+ +F PR V WNA
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 520 IISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
+I+ + +HG AL F +M G++P ITF+ L AC+H+GLV+EG R F M +E
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
+GIKP ++HYGC+V L GRAG L A+ I+NM + D+ +W ++LG+C++HG+ LG
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
++ L ++ +N G YVL+SNIYA+VG +EGV +VR+L +++G+ K PG S+IE+ NKV
Sbjct: 451 IAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
F G+R H K ++IY LR ++ ++KS GYVP+ + VLQD+EE EKE L HSERLAI
Sbjct: 511 EFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAI 570
Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
A+G+IS+ P SP++IFKNLRVC DCH TK IS+IT R+I++RD NRFHHF DG CSCGD
Sbjct: 571 AYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGD 630
Query: 819 YW 820
+W
Sbjct: 631 FW 632
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 39/323 (12%)
Query: 240 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 299
++ + T +S+L C+ SG LIH +++K GL + +V+ L+++YAK G + A
Sbjct: 126 INPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 300 RVFDQ-------------------------------MMERDVVSWNSIIAAYEQSNDPIT 328
+VFD+ M ERD+VSWN +I Y Q P
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 329 AHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 387
A F + G +PD +T+V+ S +Q+ R +H F+ + +V + +
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGL 300
Query: 388 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 447
+DMY+K G + A VF P KD+++WN +I GYA +G + +A+ +F M+ + P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 448 QGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
T++ L A +H G + +GI+I + + + + CLV + G+ G++ A
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 507 YQVPR-SSSVPWNAIISCHGIHG 528
+ + SV W++++ +HG
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHG 443
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 35/299 (11%)
Query: 84 KLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLR 143
KL YA+ G + S F +++ + + I+ G +A + Q L+S +
Sbjct: 69 KLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQL-LSSEIN 127
Query: 144 PDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDD 203
P+ +TF +LK+C + GK IH VLK G D +VA L+ +Y + G A+K+FD
Sbjct: 128 PNEFTFSSLLKSC-STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR 186
Query: 204 MPVR-------------------------------DSGSWNAMISGYCQSGNAVEALDIL 232
MP R D SWN MI GY Q G +AL +
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 233 DEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 291
++ EG D ITV + L C++ + +G IH+++ + N+ V LI+MY+K
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 292 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLV 349
G + A+ VF+ +D+V+WN++IA Y A F MQ G+QP +T +
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 146/314 (46%), Gaps = 17/314 (5%)
Query: 77 KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
+++ SST ++ YA G++ +R FD + R++ +WN MI Y + G ++A+ F +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 137 TLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL 193
+PD T L AC L G+ IH V +V V L+ MY + G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 194 ANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILP 252
A +F+D P +D +WNAMI+GY G + +AL + +EM+ + G+ IT L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 253 VCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
CA + + G+ I + ++G++ + L+++ + G ++ A M M+ D
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 311 VSWNSIIAAYEQSND-----PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSR 365
V W+S++ + + D I + ++ +GI V L++I A + D
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGI------YVLLSNIYASVGDYEGVA 483
Query: 366 SVHGFIMRRGWFME 379
V + +G E
Sbjct: 484 KVRNLMKEKGIVKE 497
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/574 (39%), Positives = 348/574 (60%), Gaps = 2/574 (0%)
Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
V IL +CAR+ ++ H I++ LE ++ + N LIN Y+K G + A +VFD M+
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
ER +VSWN++I Y ++ A F M+ G + T+ S+ S D +
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
+H ++ + ++ +G A++D+YAK G+I A VFE + K ++W++++ GY QN
Sbjct: 184 LHCLSVKTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
EA+ +++ + + + NQ T S++ A S++ AL +G ++HA + K+ +VFVA
Sbjct: 243 NYEEALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
+ VDMY KCG + ++ +F +V + WN IIS H + + + F +M +G+
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
P+ +TF SLL+ C H+GLV EG+R+F +M+ +G+ P++ HY CMVD+ GRAG L A+
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
I+++P P ASIWG+LL +CR++ N+EL VA+++LFE++ EN G +VL+SNIYA +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
WE + + R L RD +KK G S I++ +KV F G HP+ +I L NL K +
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541
Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
GY P L DVE +KE +L HSE+LA+ FG++ P SP++I KNLR+C DCH +
Sbjct: 542 FGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEF 601
Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
K S T R IIVRD NRFHHF DG CSCGD+W
Sbjct: 602 MKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 208/377 (55%), Gaps = 9/377 (2%)
Query: 152 VLKAC-RN--LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 208
+L+ C RN +++ K H ++++ E DV + L++ Y + G +AR++FD M R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
SWN MI Y ++ EALDI EMR EG T++S+L C + + L +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
VK ++ NL+V L+++YAK GM++ A++VF+ M ++ V+W+S++A Y Q+ +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 329 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 388
A + Q+ ++ + TL S+ + L + +H I + G F +V + ++ V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAV 305
Query: 389 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 448
DMYAK G + + +F + K++ WNT+I+G+A++ E + +F+ M++ + ++PN+
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNE 364
Query: 449 GTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVATCLVDMYGKCGRIDDAMSLF 506
T+ S+L H G + +G + ++++ L +V +C+VD+ G+ G + +A L
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423
Query: 507 YQVPRSSSVP-WNAIIS 522
+P + W ++++
Sbjct: 424 KSIPFDPTASIWGSLLA 440
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 222/463 (47%), Gaps = 24/463 (5%)
Query: 14 CKLLPLLQAHRPLFS-----AAANSLQISPDCLENE-SREIDFDDLFQSCTK---LHHVK 64
CK+LP L A+ + ++SP NE S ++ Q C + + K
Sbjct: 22 CKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAK 81
Query: 65 RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCG 124
H ++ V L+N Y+ G + +R FD + R++ +WN+MI +Y R
Sbjct: 82 ACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 141
Query: 125 RLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVA 181
SEA+D F + G + +T VL AC + ++ KK+HC +K + +++V
Sbjct: 142 MESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 182 ASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
+LL +Y + G+ A ++F+ M + S +W++M++GY Q+ N EAL + + +
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
+ T++S++ C+ ++ G +H I K G N+FV+++ ++MYAK G +R + +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 302 FDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC 361
F ++ E+++ WN+II+ + + P F MQQ G+ P+ +T SL S+
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 362 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTLIT 420
R + +V+ + +VD+ + G+++ A + + +P S W +L+
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 421 G---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYS 459
Y LA A E +F++ E N G +V + Y+
Sbjct: 441 SCRVYKNLELAEVAAEKLFELEPE------NAGNHVLLSNIYA 477
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
N+ IL + GA+ + H ++I+ L DV + L++ Y KCG ++ A +F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
+ S V WN +I + + +AL+ F +M +EG + T S+L+AC +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
E ++ H + + I +L ++DL+ + G + A ++M + + W +++
Sbjct: 180 ECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237
Query: 627 CRIHGNME 634
+ N E
Sbjct: 238 YVQNKNYE 245
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/689 (36%), Positives = 401/689 (58%), Gaps = 10/689 (1%)
Query: 50 FDDLFQSCTKLHHVKRLHAL---LVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
F L ++C L + K + L + G F ++ L+ Y G + FD +
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GK 163
++ WN M++ Y +CG L + F + + P+ TF VL C + L+D G
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 164 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 223
++H V+ G +++ + SLL MY + G + A KLF M D+ +WN MISGY QSG
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 224 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 283
E+L EM GV D IT +S+LP ++ +N+ IH YI++H + ++F+++
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 284 NLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQP 343
LI+ Y K + A +F Q DVV + ++I+ Y + I + F + + I P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 344 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 403
+ +TLVS+ ++ L + R +HGFI+++G F IG AV+DMYAK G +N A +
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 404 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
FE L +D++SWN++IT AQ+ S AI++F+ M + I + + + L A +++ +
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG-VSGICYDCVSISAALSACANLPS 557
Query: 464 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 523
G IH +IK+ L DV+ + L+DMY KCG + AM++F + + V WN+II+
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
Query: 524 HGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
G HG+ +L F +M+++ G+RPD ITF+ ++++C H G V EG R+F M E++GI+
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677
Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
P +HY C+VDLFGRAG L A+ +++MP PDA +WG LLGACR+H N+EL VAS +
Sbjct: 678 PQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSK 737
Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
L ++D N GYYVL+SN +AN +WE V +VRSL ++R ++K PG+S IE+N + +F +
Sbjct: 738 LMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVS 797
Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVP 731
G+ HP+ IY L +L +++ GY+P
Sbjct: 798 GDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Score = 286 bits (733), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 198/693 (28%), Positives = 351/693 (50%), Gaps = 35/693 (5%)
Query: 53 LFQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYR- 108
L Q+C+ L K++HA L+V+ ++ +++ YA G S F + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 109 -NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHC 167
++ WNS+IS +VR G L++A+ FY L G+ PD TFP ++KAC L + K I
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQAL-AFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 168 ---SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGN 224
+V LG + + FVA+SL+ Y +G +V KLFD + +D WN M++GY + G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 225 AVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN 284
+ MR++ +S + +T +L VCA I G+ +H +V G++F + N+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 285 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 344
L++MY+K G A ++F M D V+WN +I+ Y QS + FF M +G+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 345 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 404
+T SL V++ + + +H +IMR + D+ + +A++D Y K ++ A +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 405 EGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
DV+ + +I+GY NGL +++E+F+ + + +I+PN+ T VSILP + AL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLAL 457
Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH 524
+ G ++H +IK + ++DMY KCGR++ A +F ++ + V WN++I+
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
A++ FRQM G+ D ++ + L+AC++ S G + H + +
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KAIHGFMIKHSLASD 576
Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
+ ++D++ + G+L A N + M + S W +++ AC HG ++ +
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 645 E---VDSENVGYYVLMSNIYANVGKW-EGVDEVRSLARDRGLK-KTPGWSSIEVNNKVDI 699
E + + + + ++S+ +VG EGV RS+ D G++ + ++ + VD+
Sbjct: 636 EKSGIRPDQITFLEIISSC-CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV-----VDL 689
Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPD 732
F R YE + KS+ + PD
Sbjct: 690 FGRAGRLTEAYETV-----------KSMPFPPD 711
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/662 (37%), Positives = 374/662 (56%), Gaps = 5/662 (0%)
Query: 162 GKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 220
G+ +H ++K L F+A L++MY + AR + P R+ SW ++ISG
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 221 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 280
Q+G+ AL EMR EGV + T A ++G IH VK G ++F
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 281 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 340
V + +MY K + A ++FD++ ER++ +WN+ I+ P A F ++
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
P+ +T + + + +HG ++R G F DV + N ++D Y K I S+
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
+F + K+ +SW +L+ Y QN E V + + + + S+L A +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNH-EDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
+ L G IHA +K C+ +FV + LVDMYGKCG I+D+ F ++P + V N++
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 521 ISCHGIHGQGDKALNFFRQMLDEGV--RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 578
I + GQ D AL F +M G P+++TFVSLL+ACS +G V G + F M+
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 579 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 638
+GI+P +HY C+VD+ GRAG + A+ FI+ MP++P S+WGAL ACR+HG +LG +
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL 502
Query: 639 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 698
A++ LF++D ++ G +VL+SN +A G+W + VR + G+KK G+S I V N+V
Sbjct: 503 AAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVH 562
Query: 699 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 758
F +R+H ++I L L +M++ GY PD L D+EE+EK ++ HSE+LA+
Sbjct: 563 AFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLAL 622
Query: 759 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 818
AFG++S P PI+I KNLR+CGDCH++ KF+S +REIIVRD+NRFH FKDGICSC D
Sbjct: 623 AFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682
Query: 819 YW 820
YW
Sbjct: 683 YW 684
Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 244/500 (48%), Gaps = 36/500 (7%)
Query: 80 FSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLT 139
F + L+N Y+ L +R RNV +W S+IS + G S A+ F++
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMR-R 101
Query: 140 SGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
G+ P+ +TFP KA +L V GK+IH +K G DVFV S MYC+ L +
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
ARKLFD++P R+ +WNA IS G EA++ E R + IT + L C+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
++ G+ +H +++ G + ++ V N LI+ Y K +R + +F +M ++ VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
+AAY Q+++ A + ++ ++ + S+ S A + RS+H + +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KAC 340
Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
+ +G+A+VDMY K G I + F+ +P K++++ N+LI GYA G A+ +F+
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 437 MMEE--CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVAT------- 487
M C PN T+VS+L A S GA+ G+KI FD +T
Sbjct: 401 EMAPRGCGP-TPNYMTFVSLLSACSRAGAVENGMKI----------FDSMRSTYGIEPGA 449
Query: 488 ----CLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKAL----NFFR 538
C+VDM G+ G ++ A ++P ++ W A+ + +HG+ L N F+
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Query: 539 QMLDEGVRPDHITFVSLLTA 558
LD +H+ + A
Sbjct: 510 --LDPKDSGNHVLLSNTFAA 527
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 9/362 (2%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
K++HAL V G+I VF + Y +R FD I RN+ TWN+ IS V
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
GR EA++ F +F G P+ TF L AC + + G ++H VL+ GF+ DV V
Sbjct: 188 GRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
L+ Y + + +F +M +++ SW ++++ Y Q+ +A + R + V
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
++S+L CA + G IH + VK +E +FV + L++MY K G + + +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQL 358
FD+M E+++V+ NS+I Y A F M + G P+ +T VSL S ++
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFEGLPVKDVIS-WN 416
N + MR + +E + +VDM + G++ A + +P++ IS W
Sbjct: 427 GAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 417 TL 418
L
Sbjct: 486 AL 487
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/721 (35%), Positives = 400/721 (55%), Gaps = 50/721 (6%)
Query: 109 NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCS 168
+ Y N +++Y +CGRLS A FY S P+ +++ ++KA KIH
Sbjct: 42 STYLSNHFVNLYSKCGRLSYARAAFY-----STEEPNVFSYNVIVKA---YAKDSKIH-- 91
Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
+AR+LFD++P D+ S+N +ISGY + A
Sbjct: 92 ---------------------------IARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
+ + MR G +D T++ ++ C +++ L H + V G + V+N +
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQL--HCFSVSGGFDSYSSVNNAFVTY 182
Query: 289 YAKFGMMRHALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
Y+K G++R A+ VF M E RD VSWNS+I AY Q + A + M G + D+ T
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS---ACAVF 404
L S+ + + L+ R HG +++ G F ++ +G+ ++D Y+K G + + VF
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 405 EGLPVKDVISWNTLITGYAQNG-LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 463
+ + D++ WNT+I+GY+ N L+ EA++ F+ M+ P+ ++V + A S++ +
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSS 360
Query: 464 LRQGIKIHARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 522
Q +IH IK+ + + + V L+ +Y K G + DA +F ++P ++V +N +I
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 523 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 582
+ HG G +AL +++MLD G+ P+ ITFV++L+AC+H G V EGQ YF+ M+E F I+
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 583 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 642
P +HY CM+DL GRAG L A FI MP +P + W ALLGACR H NM L A++
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540
Query: 643 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 702
L + YV+++N+YA+ KWE + VR R + ++K PG S IEV K +F
Sbjct: 541 LMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVA 600
Query: 703 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI---LTSHSERLAIA 759
+ +HP ++ + L + KMK +GYV DK + + +E + L HSE+LA+A
Sbjct: 601 EDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVA 660
Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
FG++S+ + + KNLR+CGDCHN KF+S + REIIVRD+ RFH FKDG CSCGDY
Sbjct: 661 FGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDY 720
Query: 820 W 820
W
Sbjct: 721 W 721
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 245/498 (49%), Gaps = 43/498 (8%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
K LHAL V S + + S VN Y+ G LS++R F NV+++N ++ Y +
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 124 GRLSEAVDCFYQF---------TLTS---------------------GLRPDFYTFPPVL 153
++ A F + TL S G D +T ++
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI 147
Query: 154 KACRNLVDG-KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGS 211
AC + VD K++HC + GF+ V + + Y + GL A +F M +RD S
Sbjct: 148 AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 212 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 271
WN+MI Y Q +AL + EM +G +D T+AS+L D+++ G H ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 272 KHGLEFNLFVSNNLINMYAKFG---MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 328
K G N V + LI+ Y+K G M + +VF +++ D+V WN++I+ Y N+ ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM-NEELS 326
Query: 329 AHGF--FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
F MQ+ G +PD + V +TS + L+ + +HG ++ + + NA
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386
Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
++ +Y K G + A VF+ +P + +S+N +I GYAQ+G +EA+ ++Q M + I P
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG-IAP 445
Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMYGKCGRIDDAMS 504
N+ T+V++L A +H G + +G + + +K + +C++D+ G+ G++++A
Sbjct: 446 NKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 505 LFYQVP-RSSSVPWNAII 521
+P + SV W A++
Sbjct: 505 FIDAMPYKPGSVAWAALL 522
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 215/491 (43%), Gaps = 88/491 (17%)
Query: 259 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH--------------------- 297
++ +G +H VK + + ++SN+ +N+Y+K G + +
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 298 ----------ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 347
A ++FD++ + D VS+N++I+ Y + + A F M++ G + D T
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 348 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 407
L L I A + + +H F + G F + NA V Y+K G++ A +VF G+
Sbjct: 143 LSGL--IAACCDRVDLIKQLHCFSVSGG-FDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 408 -PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 466
++D +SWN++I Y Q+ ++A+ +++ M + T S+L A + + L
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEM-IFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 467 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID---DAMSLFYQVPRSSSVPWNAIISC 523
G + H ++IK + V + L+D Y KCG D D+ +F ++ V WN +IS
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 524 HGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSH--------------------- 561
+ ++ + ++A+ FRQM G RPD +FV + +ACS+
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 562 ---------------SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
SG + + + F M E + + CM+ + + GH A
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS-----FNCMIKGYAQHGHGTEALL 433
Query: 607 FIQNM---PVRPDASIWGALLGACRIHGNMELGAVASDRL---FEVDSENVGYYVLMSNI 660
Q M + P+ + A+L AC G ++ G + + F+++ E +Y M ++
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE-AEHYSCMIDL 492
Query: 661 YANVGKWEGVD 671
GK E +
Sbjct: 493 LGRAGKLEEAE 503
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 364/617 (58%), Gaps = 16/617 (2%)
Query: 209 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 268
S WN + E++ + M G S D + IL CA +SG +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 269 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--WNSIIAAYEQSNDP 326
++ K G E FV LI+MY K G++ A +VF++ + +S +N++I+ Y ++
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 327 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 386
A F M++ G+ D +T++ L + RS+HG ++ G +V + N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNS 196
Query: 387 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 446
+ MY K G + + +F+ +PVK +I+WN +I+GY+QNGLA + +E+++ M+ + P
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCP 255
Query: 447 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 506
+ T VS+L + +H+GA + G ++ V N +VFV+ + MY +CG + A ++F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 507 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 566
+P S V W A+I C+G+HG G+ L F M+ G+RPD FV +L+ACSHSGL
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 567 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 626
+G F M+ E+ ++P +HY C+VDL GRAG L A FI++MPV PD ++WGALLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 627 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 686
C+IH N+++ +A ++ E + N+GYYVLMSNIY++ EG+ +R + R+R +K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 687 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 746
G+S +E +V +F G+R+H + E+++ L L + L +++ D E
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA---------GNMDCDRGE 546
Query: 747 HILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 803
+ ++ HSERLAIAFGI++S P + I + KNLRVC DCH + K +S+I +R+ +VRD+
Sbjct: 547 EVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDA 606
Query: 804 NRFHHFKDGICSCGDYW 820
+RFH+FKDG+CSC DYW
Sbjct: 607 SRFHYFKDGVCSCKDYW 623
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 24/386 (6%)
Query: 50 FDDLFQSCTKLH---HVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDH-- 104
F + +SC L ++LH + G F T L++ Y G ++ +R F+
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP 115
Query: 105 ISYRNVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVD 161
S + +N++IS Y ++++A F + T G+ D T ++ C L
Sbjct: 116 QSSQLSVCYNALISGYTANSKVTDAAYMFRRMKET-GVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 162 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQ 221
G+ +H +K G + +V V S + MY + G R+LFD+MPV+ +WNA+ISGY Q
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 222 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 281
+G A + L++ ++M+ GV DP T+ S+L CA G + + +G N+FV
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFV 294
Query: 282 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 341
SN I+MYA+ G + A VFD M + +VSW ++I Y F M + GI
Sbjct: 295 SNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 342 QPDLLTLVSLTSIVAQ--LNDCRNSRSVHGF-IMRRGWFMEDVIIG----NAVVDMYAKL 394
+PD V + S + L D + + F M+R + +E G + +VD+ +
Sbjct: 355 RPDGAVFVMVLSACSHSGLTD----KGLELFRAMKREYKLEP---GPEHYSCLVDLLGRA 407
Query: 395 GIINSACAVFEGLPVK-DVISWNTLI 419
G ++ A E +PV+ D W L+
Sbjct: 408 GRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 53 LFQSCTKLHHVKRLH---ALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRN 109
+ SC L K H L+ +G + VF S ++ YA G+L+ +R FD + ++
Sbjct: 263 VLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKS 322
Query: 110 VYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVDGKKIHC 167
+ +W +MI Y G + E + + G+RPD F VL AC + L D
Sbjct: 323 LVSWTAMIGCYGMHG-MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 168 SVLKLGFEWDVFVA--ASLLHMYCRFGLANVARKLFDDMPVRDSGS-WNAMISGYCQ 221
+K ++ + + L+ + R G + A + + MPV G+ W A++ G C+
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL-GACK 437
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 368/601 (61%), Gaps = 28/601 (4%)
Query: 242 MDPITVASIL--PVCARSDNILSGL---------LIHLYIVKHGLEFNLFVSNNLINMYA 290
M P + S+L P+ + N+L IH + ++HG+ +S+ + +
Sbjct: 1 MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVS----ISDAELGKHL 56
Query: 291 KFGM--------MRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG- 340
F + M +A +VF ++ + +V WN++I Y + + I+A + M+ +G
Sbjct: 57 IFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL 116
Query: 341 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 400
++PD T L V + D R ++H ++R G F + + N+++ +YA G + SA
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASA 175
Query: 401 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 460
VF+ +P KD+++WN++I G+A+NG EA+ ++ M I P+ T VS+L A +
Sbjct: 176 YKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAK 234
Query: 461 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 520
+GAL G ++H +IK L ++ + L+D+Y +CGR+++A +LF ++ +SV W ++
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 521 ISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 579
I ++G G +A+ F+ M EG+ P ITFV +L ACSH G+V EG YF M+EE+
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 580 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 639
I+P ++H+GCMVDL RAG + A+ +I++MP++P+ IW LLGAC +HG+ +L A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 640 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 699
++ +++ + G YVL+SN+YA+ +W V ++R G+KK PG S +EV N+V
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 700 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 759
F G+++HP+ + IY +L+ +T +++S GYVP S V DVEE+EKE+ + HSE++AIA
Sbjct: 475 FLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIA 534
Query: 760 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 819
F +IS+P +SPI + KNLRVC DCH K +S++ REI+VRD +RFHHFK+G CSC DY
Sbjct: 535 FMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594
Query: 820 W 820
W
Sbjct: 595 W 595
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 196/382 (51%), Gaps = 30/382 (7%)
Query: 95 LSFSRHTFDHISYR-NVYTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVL 153
+S++ F I NV+ WN++I Y G A + + ++ + PD +T+P ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 154 KACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSG 210
KA + D G+ IH V++ GF ++V SLLH+Y G A K+FD MP +D
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 211 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 270
+WN++I+G+ ++G EAL + EM +G+ D T+ S+L CA+ + G +H+Y+
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 271 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 330
+K GL NL SN L+++YA+ G + A +FD+M++++ VSW S+I + A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 331 GFFTTMQQA-GIQPDLLTLVSLTSIVAQLNDCRNSRSV-HGF----IMRRGWFMEDVIIG 384
F M+ G+ P +T V + L C + V GF MR + +E I
Sbjct: 309 ELFKYMESTEGLLPCEITFVGI------LYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 385 -NAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLI---TGYAQNGLASEA-IEVFQMM 438
+VD+ A+ G + A + +P++ +V+ W TL+ T + + LA A I++ Q+
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL- 421
Query: 439 EECNEINPNQ-GTYVSILPAYS 459
PN G YV + Y+
Sbjct: 422 ------EPNHSGDYVLLSNMYA 437
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/625 (39%), Positives = 347/625 (55%), Gaps = 81/625 (12%)
Query: 197 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 256
A +LFD++P D+ S+N M+S Y ++ N +A D M P A+
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM--------PFKDAASW----- 158
Query: 257 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 316
N +I YA+ G M A +F MME++ VSWN++
Sbjct: 159 --------------------------NTMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192
Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
I+ Y + D A FF G
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRG------------------------------------ 216
Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVF 435
V+ A++ Y K + A A+F+ + V K++++WN +I+GY +N + +++F
Sbjct: 217 ----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 436 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 495
+ M E I PN S L S + AL+ G +IH V K+ LC DV T L+ MY K
Sbjct: 273 RAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 496 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 555
CG + DA LF + + V WNA+IS + HG DKAL FR+M+D +RPD ITFV++
Sbjct: 332 CGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Query: 556 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 615
L AC+H+GLV+ G YF M ++ ++P HY CMVDL GRAG L A I++MP RP
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRP 451
Query: 616 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 675
A+++G LLGACR+H N+EL A+++L +++S+N YV ++NIYA+ +WE V VR
Sbjct: 452 HAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRK 511
Query: 676 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 735
++ + K PG+S IE+ NKV F + +R HP+ + I+ +L+ L KMK GY P+ F
Sbjct: 512 RMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEF 571
Query: 736 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 795
L +VEE++KE +L HSE+LA+AFG I P S IQ+FKNLR+CGDCH KFIS+I +
Sbjct: 572 ALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEK 631
Query: 796 REIIVRDSNRFHHFKDGICSCGDYW 820
REIIVRD+ RFHHFKDG CSCGDYW
Sbjct: 632 REIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 205/438 (46%), Gaps = 56/438 (12%)
Query: 79 VFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS-MISVYVRCGRLSEAVDCFYQFT 137
+F K++ GD+ + F + +N TWNS +I + R+ EA F +
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 138 LTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 197
PD +++ +L V+ +K ++ F+ D +++ Y R G A
Sbjct: 121 -----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK-DAASWNTMITGYARRGEMEKA 174
Query: 198 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 257
R+LF M ++ SWNAMISGY + G+ +A VA + V A +
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF-------------KVAPVRGVVAWT 221
Query: 258 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF-DQMMERDVVSWNSI 316
+I Y K + A +F D + +++V+WN++
Sbjct: 222 --------------------------AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 317 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 376
I+ Y +++ P F M + GI+P+ L S ++L+ + R +H I+ +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKST 314
Query: 377 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 436
DV +++ MY K G + A +FE + KDV++WN +I+GYAQ+G A +A+ +F+
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 437 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA----TCLVDM 492
M + N+I P+ T+V++L A +H G + G+ ++++ + V TC+VD+
Sbjct: 375 EMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD---YKVEPQPDHYTCMVDL 430
Query: 493 YGKCGRIDDAMSLFYQVP 510
G+ G++++A+ L +P
Sbjct: 431 LGRAGKLEEALKLIRSMP 448
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 38/276 (13%)
Query: 77 KTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRCGRLSEAVDCFYQF 136
K S ++ YA G++ +R F + +N +WN+MIS Y+ CG L +A
Sbjct: 153 KDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKA------- 205
Query: 137 TLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 196
F+ PV R +V W + Y + +
Sbjct: 206 -------SHFFKVAPV----RGVV--------------AWTAMITG-----YMKAKKVEL 235
Query: 197 ARKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 255
A +F DM V ++ +WNAMISGY ++ + L + M EG+ + ++S L C+
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
+ G IH + K L ++ +LI+MY K G + A ++F+ M ++DVV+WN+
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355
Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 351
+I+ Y Q + A F M I+PD +T V++
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 6/235 (2%)
Query: 76 IKTVFSSTKLVNFYANLGDLSFSRHTFDHISY-RNVYTWNSMISVYVRCGRLSEAVDCFY 134
++ V + T ++ Y + + F ++ +N+ TWN+MIS YV R + + F
Sbjct: 214 VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF- 272
Query: 135 QFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRF 191
+ L G+RP+ L C L G++IH V K DV SL+ MYC+
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332
Query: 192 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 251
G A KLF+ M +D +WNAMISGY Q GNA +AL + EM + D IT ++L
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Query: 252 PVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM 305
C + + G+ +V+ + +E ++++ + G + AL++ M
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 65/309 (21%)
Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 444
N ++ + G I+ A VF G+ K+ I+WN+L+ G +++ S +E Q+ +E E
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAHQLFDEIPE- 121
Query: 445 NPNQGTYVSILPAYSH--------------------------VGALRQGIKIHARVI--- 475
P+ +Y +L Y G R+G AR +
Sbjct: 122 -PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 476 ---KNCLCFDVFVA--------------------------TCLVDMYGKCGRIDDAMSLF 506
KN + ++ ++ T ++ Y K +++ A ++F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 507 YQVPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 565
+ + + V WNA+IS + + + + L FR ML+EG+RP+ S L CS +
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 566 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 625
G R H + + + + ++ ++ + G LG A + M + D W A++
Sbjct: 301 QLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMIS 358
Query: 626 ACRIHGNME 634
HGN +
Sbjct: 359 GYAQHGNAD 367
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
+++H ++ S V + T L++ Y G+L + F+ + ++V WN+MIS Y +
Sbjct: 304 RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW------D 177
G +A+ C ++ + + +RPD+ TF VL AC H ++ +G + D
Sbjct: 364 GNADKAL-CLFREMIDNKIRPDWITFVAVLLACN--------HAGLVNIGMAYFESMVRD 414
Query: 178 VFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 231
V H C R G A KL MP R + + G C+ VE +
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 474
Query: 232 LDEMRLE 238
E L+
Sbjct: 475 AAEKLLQ 481
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 372/659 (56%), Gaps = 4/659 (0%)
Query: 163 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 222
K+IH S++ D F+ LL F + LF + +N++I+G+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 223 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 282
E LD+ +R G+ + T +L C R+ + G+ +H +VK G ++
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 283 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 342
+L+++Y+ G + A ++FD++ +R VV+W ++ + Y S A F M + G++
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 343 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 402
PD +V + S + D + + + M ++ + +V++YAK G + A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKY-MEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 403 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 461
VF+ + KD+++W+T+I GYA N E IE+F QM++E + P+Q + V L + + +
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE--NLKPDQFSIVGFLSSCASL 326
Query: 462 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 521
GAL G + + ++ ++F+A L+DMY KCG + +F ++ V NA I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 522 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 581
S +G + F Q G+ PD TF+ LL C H+GL+ +G R+F+ + + +
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 582 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 641
K ++HYGCMVDL+GRAG L A+ I +MP+RP+A +WGALL CR+ + +L
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 642 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 701
L ++ N G YV +SNIY+ G+W+ EVR + +G+KK PG+S IE+ KV F
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566
Query: 702 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 761
+++HP +KIY +L +L +M+ +G+VP FV DVEE+EKE +L HSE+LA+A G
Sbjct: 567 ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALG 626
Query: 762 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
+IS+ I++ KNLRVCGDCH K IS+IT REI+VRD+NRFH F +G CSC DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 236/472 (50%), Gaps = 9/472 (1%)
Query: 56 SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNS 115
+CT ++H+K++H L+ F L+ +S F H + N++ +NS
Sbjct: 23 ACT-VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNS 81
Query: 116 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 172
+I+ +V E +D F GL +TFP VLKAC G +H V+K
Sbjct: 82 LINGFVNNHLFHETLDLFLSIR-KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 173 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 232
GF DV SLL +Y G N A KLFD++P R +W A+ SGY SG EA+D+
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 233 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 292
+M GV D + +L C ++ SG I Y+ + ++ N FV L+N+YAK
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 293 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 352
G M A VFD M+E+D+V+W+++I Y ++ P F M Q ++PD ++V
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 353 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 412
S A L I R F+ ++ + NA++DMYAK G + VF+ + KD+
Sbjct: 321 SSCASLGALDLGEWGISLIDRHE-FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 413 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IH 471
+ N I+G A+NG + VF E+ I+P+ T++ +L H G ++ G++ +
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 472 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 522
A L V C+VD++G+ G +DDA L +P R +++ W A++S
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/559 (39%), Positives = 344/559 (61%), Gaps = 8/559 (1%)
Query: 266 IHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 324
IH +++ G E N ++ L N+ G M +A +VFD+M + + WN++ Y ++
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 325 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 384
P + + M+ G++PD T + ++QL D ++H +++ G F I+
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG-FGCLGIVA 147
Query: 385 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC-NE 443
+V MY K G ++SA +FE + VKD+++WN + Q G ++ A+E F M C +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM--CADA 205
Query: 444 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 503
+ + T VS+L A +G+L G +I+ R K + ++ V +DM+ KCG + A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 504 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 563
LF ++ + + V W+ +I + ++G +AL F M +EG+RP+++TF+ +L+ACSH+G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 564 LVSEGQRYFHMMQE--EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 621
LV+EG+RYF +M + + ++P +HY CMVDL GR+G L A+ FI+ MPV PD IWG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 622 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 681
ALLGAC +H +M LG +D L E + Y+VL+SNIYA GKW+ VD+VRS R G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 682 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 741
KK +SS+E K+ F G+++HP+ + IY++L + K++ +GYVPD V DVE
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505
Query: 742 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 801
+EKE L+ HSE+LAIAFG+I P PI++ KNLR C DCH ++KF+S +T EII+R
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565
Query: 802 DSNRFHHFKDGICSCGDYW 820
D NRFHHF++G+CSC ++W
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)
Query: 53 LFQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYT 112
L S +K +K++HA+++ +G + T+L+ +GD+ ++R FD + ++
Sbjct: 17 LRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFL 76
Query: 113 WNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSV 169
WN++ YVR E++ Y+ G+RPD +T+P V+KA L D G +H V
Sbjct: 77 WNTLFKGYVRNQLPFESL-LLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV 135
Query: 170 LKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 229
+K GF VA L+ MY +FG + A LF+ M V+D +WNA ++ Q+GN+ AL
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 230 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 289
+ ++M + V D TV S+L C + ++ G I+ K ++ N+ V N ++M+
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMH 255
Query: 290 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 349
K G A +F++M +R+VVSW+++I Y + D A FTTMQ G++P+ +T +
Sbjct: 256 LKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFL 315
Query: 350 SLTSIVAQLNDCRNSRSVHGFIMRRG-WFMEDVIIGNA-VVDMYAKLGIINSACAVFEGL 407
+ S + + +++ +E A +VD+ + G++ A + +
Sbjct: 316 GVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375
Query: 408 PVK-DVISWNTLITGYA 423
PV+ D W L+ A
Sbjct: 376 PVEPDTGIWGALLGACA 392
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/607 (38%), Positives = 351/607 (57%), Gaps = 41/607 (6%)
Query: 251 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 310
L +CAR+ + + +H +IVK G+ ++N L+N+Y K G HAL+VFD+M RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 311 VSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH- 368
++W S++ A Q+N T F + +G++PD +L A L + R VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 369 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 428
FI+ + D ++ +++VDMYAK G++NSA AVF+ + VK+ ISW +++GYA++G
Sbjct: 130 HFIVSE--YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 429 SEAIEVFQMMEECNE----------INPNQG---------------------TYVSILPA 457
EA+E+F+++ N + +G SI+ A
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGA 247
Query: 458 YSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSV 515
+++ A G ++H VI L FD VF++ L+DMY KC + A +F ++ V
Sbjct: 248 CANLAASIAGRQVHGLVI--ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVV 305
Query: 516 PWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMM 575
W ++I HGQ +KAL + M+ GV+P+ +TFV L+ ACSH G V +G+ F M
Sbjct: 306 SWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 576 QEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL 635
+++GI+P L+HY C++DL GR+G L A N I MP PD W ALL AC+ G ++
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 636 GAVASDRLF-EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
G +D L ++ Y+L+SNIYA+ W V E R + ++K PG SS+EV
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTSHS 753
+ ++FY G +HP E I+ L+ L +M+ GYVPD S++L D++E EKE +L HS
Sbjct: 486 KETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHS 545
Query: 754 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 813
ER A+A+G++ + P +PI+I KNLRVCGDCH K IS+ITEREIIVRD+ R+HHFK G
Sbjct: 546 ERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGK 605
Query: 814 CSCGDYW 820
CSC D+W
Sbjct: 606 CSCNDFW 612
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 222/458 (48%), Gaps = 40/458 (8%)
Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
R L K +H ++KLG +A +L+++Y + G A+ A ++FD+MP RD +W +++
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 76
Query: 217 SGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 275
+ Q+ + + L G+ D ++++ CA +I G +H + +
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 276 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE-------------- 321
+ V ++L++MYAK G++ A VFD + ++ +SW ++++ Y
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 322 -----------------QSNDPITAHGFFTTMQQAGIQP-DLLTLVSLTSIVAQLNDCRN 363
QS + A FT M++ + D L L S+ A L
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Query: 364 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 423
R VHG ++ G F V I NA++DMYAK + +A +F + +DV+SW +LI G A
Sbjct: 257 GRQVHGLVIALG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA 315
Query: 424 QNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFD 482
Q+G A +A+ ++ M + + PN+ T+V ++ A SHVG + +G ++ + K+ +
Sbjct: 316 QHGQAEKALALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374
Query: 483 VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQML 541
+ TCL+D+ G+ G +D+A +L + +P P W A++S G+G + ++
Sbjct: 375 LQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 542 DEGVRPDHITFV---SLLTACSHSGLVSEGQRYFHMMQ 576
D T++ ++ + S G VSE +R M+
Sbjct: 435 SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 194/420 (46%), Gaps = 39/420 (9%)
Query: 54 FQSCTK---LHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNV 110
Q C + L K LHA +V G ++ + LVN Y G S + FD + +R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 111 YTWNSMISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VD-GKKIHC 167
W S+++ + + + F +SGLRPD + F ++KAC NL +D G+++HC
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 168 SVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC------- 220
+ + D V +SL+ MY + GL N A+ +FD + V+++ SW AM+SGY
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 221 ------------------------QSGNAVEALDILDEMRLEGVS-MDPITVASILPVCA 255
QSG +EA + EMR E V +DP+ ++SI+ CA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 256 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 315
++G +H ++ G + +F+SN LI+MYAK + A +F +M RDVVSW S
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 316 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 375
+I Q A + M G++P+ +T V L + + R + + +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 376 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEV 434
+ ++D+ + G+++ A + +P D +W L++ + G I +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 39/309 (12%)
Query: 50 FDDLFQSCTKL---HHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHIS 106
F L ++C L H +++H +VS + LV+ YA G L+ ++ FD I
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 107 YRNVYTWNSMISVYVRCGRLSEAVDCF--------YQFT-LTSGLRP------------- 144
+N +W +M+S Y + GR EA++ F Y +T L SG
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 145 ---------DFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 192
D ++ AC NL + G+++H V+ LGF+ VF++ +L+ MY +
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 193 LANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILP 252
A+ +F M RD SW ++I G Q G A +AL + D+M GV + +T ++
Sbjct: 288 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 253 VCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQM-MERDV 310
C+ + G + + K +G+ +L L+++ + G++ A + M D
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE 407
Query: 311 VSWNSIIAA 319
+W ++++A
Sbjct: 408 PTWAALLSA 416
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/574 (41%), Positives = 347/574 (60%), Gaps = 3/574 (0%)
Query: 247 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 306
+ +L AR+ + + GL +H Y+VK GL V+NNLIN Y+K + + R F+
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 307 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 366
++ +W+SII+ + Q+ P + F M ++PD L S T A L+ C RS
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 367 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 426
VH M+ G + DV +G+++VDMYAK G I A +F+ +P ++V++W+ ++ GYAQ G
Sbjct: 138 VHCLSMKTG-YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 427 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 486
EA+ +F+ N + N ++ S++ ++ L G +IH IK+ FV
Sbjct: 197 ENEEALWLFKEALFEN-LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 487 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 546
+ LV +Y KCG + A +F +VP + WNA++ + H K + F++M G++
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 547 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 606
P+ ITF+++L ACSH+GLV EG+ YF M+E I+P KHY +VD+ GRAG L A
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 607 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 666
I NMP+ P S+WGALL +C +H N EL A A+D++FE+ + G ++ +SN YA G+
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434
Query: 667 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 726
+E + R L RDRG KK G S +E NKV F G R H K ++IY++L L +M+
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 494
Query: 727 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 786
GY+ D S+VL++V+ DEK + HSERLAIAFG+I+ P PI++ KNLRVCGDCHN
Sbjct: 495 AGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNA 554
Query: 787 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 820
KF+S T R IIVRD+NRFH F+DG CSC DYW
Sbjct: 555 IKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 211/425 (49%), Gaps = 40/425 (9%)
Query: 65 RLHALLVVSGKIKTVFSSTKLVNFYANLGDLSF-SRHTFDHISYRNVYTWNSMISVYVRC 123
+LH +V SG + L+NFY+ L F SR F+ ++ TW+S+IS + +
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSK-SQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ- 93
Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFV 180
L F + + LRPD + P K+C L G+ +HC +K G++ DVFV
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
+SL+ MY + G ARK+FD+MP R+ +W+ M+ GY Q G EAL + E E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
+++ + +S++ VCA S + G IH +K + + FV ++L+++Y+K G+ A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 301 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 360
VF+++ +++ WN+++ AY Q + F M+ +G++P+ +T +++ LN
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV------LNA 327
Query: 361 CRNSRSVHGFIMRRGWFMEDVIIGN----------AVVDMYAKLGIINSACAVFEGLPVK 410
C H ++ G + D + + ++VDM + G + A V +P+
Sbjct: 328 CS-----HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382
Query: 411 DVIS-WNTLITG---YAQNGLAS-EAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGAL 464
S W L+T + LA+ A +VF E+ P + G ++S+ AY+ G
Sbjct: 383 PTESVWGALLTSCTVHKNTELAAFAADKVF-------ELGPVSSGMHISLSNAYAADGRF 435
Query: 465 RQGIK 469
K
Sbjct: 436 EDAAK 440
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 199/382 (52%), Gaps = 11/382 (2%)
Query: 157 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 216
R+ + G ++H V+K G VA +L++ Y + L +R+ F+D P + S +W+++I
Sbjct: 29 RSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSII 88
Query: 217 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS----GLLIHLYIVK 272
S + Q+ +L+ L +M + D +LP +S ILS G +H +K
Sbjct: 89 SCFAQNELPWMSLEFLKKMMAGNLRPDD----HVLPSATKSCAILSRCDIGRSVHCLSMK 144
Query: 273 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 332
G + ++FV ++L++MYAK G + +A ++FD+M +R+VV+W+ ++ Y Q + A
Sbjct: 145 TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWL 204
Query: 333 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYA 392
F + + + S+ S+ A R +HG + + F +G+++V +Y+
Sbjct: 205 FKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYS 263
Query: 393 KLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYV 452
K G+ A VF +PVK++ WN ++ YAQ+ + IE+F+ M + + + PN T++
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFL 322
Query: 453 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-R 511
++L A SH G + +G ++ ++ + LVDM G+ GR+ +A+ + +P
Sbjct: 323 NVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382
Query: 512 SSSVPWNAIISCHGIHGQGDKA 533
+ W A+++ +H + A
Sbjct: 383 PTESVWGALLTSCTVHKNTELA 404
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 128/245 (52%), Gaps = 4/245 (1%)
Query: 64 KRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTWNSMISVYVRC 123
+ +H L + +G VF + LV+ YA G++ ++R FD + RNV TW+ M+ Y +
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 195
Query: 124 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKLGFEWDVFV 180
G EA+ F + L L + Y+F V+ C N L G++IH +K F+ FV
Sbjct: 196 GENEEALWLFKE-ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254
Query: 181 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 240
+SL+ +Y + G+ A ++F+++PV++ G WNAM+ Y Q + + +++ M+L G+
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 241 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 300
+ IT ++L C+ + + G + + +E +L++M + G ++ AL
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 301 VFDQM 305
V M
Sbjct: 375 VITNM 379
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 354/606 (58%), Gaps = 52/606 (8%)
Query: 266 IHLYIVKHGLEFNLFVSNNLINMYAKFGM----MRHALRVFDQMMERDVVSWNSIIAAYE 321
IH +K G + + ++ A + + +A ++F+QM +R+ SWN+II +
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 322 QSNDP---ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-- 376
+S++ I F+ M ++P+ T S+ A+ + + +HG ++ G+
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161
Query: 377 ----------------FMED--------------------------VIIGNAVVDMYAKL 394
FM+D +++ N ++D Y +L
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 395 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 454
G +A +F+ + + V+SWNT+I+GY+ NG +A+EVF+ M++ +I PN T VS+
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK-GDIRPNYVTLVSV 280
Query: 455 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 514
LPA S +G+L G +H + + D + + L+DMY KCG I+ A+ +F ++PR +
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 515 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 574
+ W+A+I+ IHGQ A++ F +M GVRP + +++LLTACSH GLV EG+RYF
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 575 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 634
M G++P ++HYGCMVDL GR+G L A FI NMP++PD IW ALLGACR+ GN+E
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Query: 635 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 694
+G ++ L ++ + G YV +SN+YA+ G W V E+R +++ ++K PG S I+++
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Query: 695 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 754
+ F + +HPK ++I L ++ K++ GY P + VL ++EE++KE++L HSE
Sbjct: 521 GVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSE 580
Query: 755 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 814
++A AFG+IS+ P PI+I KNLR+C DCH+ K IS++ +R+I VRD RFHHF+DG C
Sbjct: 581 KIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSC 640
Query: 815 SCGDYW 820
SC DYW
Sbjct: 641 SCMDYW 646
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 157/566 (27%), Positives = 257/566 (45%), Gaps = 78/566 (13%)
Query: 151 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL----ANVARKLFDDMPV 206
P + CR + D +IH +K G D AA +L L + A K+F+ MP
Sbjct: 28 PQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 207 RDSGSWNAMISGYCQSG--NAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSG 263
R+ SWN +I G+ +S A+ A+ + EM E V + T S+L CA++ I G
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
Query: 264 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA------------------------- 298
IH +K+G + FV +NL+ MY G M+ A
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207
Query: 299 -----------LR---------VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 338
+R +FD+M +R VVSWN++I+ Y + A F M++
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 339 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 398
I+P+ +TLVS+ +++L +H + G ++DV +G+A++DMY+K GII
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIE 326
Query: 399 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 458
A VFE LP ++VI+W+ +I G+A +G A +AI+ F M + + P+ Y+++L A
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTAC 385
Query: 459 SHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 516
SH G + +G + ++++ + L + C+VD+ G+ G +D+A +P + V
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 517 WNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 573
W A++ + G G + N M V D +V+L + G SE
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDM----VPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 574 MMQEEFGIKPHLKHYGC-MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL----GACR 628
M+E K K GC ++D+ G+ H F+ P A ++L R
Sbjct: 502 RMKE----KDIRKDPGCSLIDID------GVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Query: 629 IHGNMELGAVASDRLFEVDSENVGYY 654
+ G + L E D ENV +Y
Sbjct: 552 LAGYRPITTQVLLNLEEEDKENVLHY 577
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 211/465 (45%), Gaps = 63/465 (13%)
Query: 56 SCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLG----DLSFSRHTFDHISYRNVY 111
+C + + ++HA+ + SG+++ ++ +++ F A DL ++ F+ + RN +
Sbjct: 32 NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 112 TWNSMISVYVRCGRLSE--AVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIH 166
+WN++I + A+ FY+ + P+ +TFP VLKAC + +GK+IH
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 167 CSVLKLGFEWDVFVAASLLHMYC------------------------------------- 189
LK GF D FV ++L+ MY
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 190 --------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS 241
R G AR LFD M R SWN MISGY +G +A+++ EM+ +
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 242 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRV 301
+ +T+ S+LP +R ++ G +HLY G+ + + + LI+MY+K G++ A+ V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 302 FDQMMERDVVSWNSII---AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 358
F+++ +V++W+++I A + Q+ D I F M+QAG++P + ++L + +
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDC---FCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 359 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNT 417
R ++ + +VD+ + G+++ A +P+K D + W
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 418 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 462
L+ G V ++ + + + G YV++ Y+ G
Sbjct: 449 LLGACRMQGNVEMGKRVANIL--MDMVPHDSGAYVALSNMYASQG 491
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 57/333 (17%)
Query: 354 IVAQLNDCRNSR---SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI----INSACAVFEG 406
+ Q+N+CR R +H ++ G M D + ++ A + ++ A +F
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQ-MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 407 LPVKDVISWNTLITGYAQNG--LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 464
+P ++ SWNT+I G++++ A AI +F M + PN+ T+ S+L A + G +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 465 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY----------------- 507
++G +IH +K D FV + LV MY CG + DA LFY
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 508 ----------------------------QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 539
++ + S V WN +IS + ++G A+ FR+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 540 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 599
M +RP+++T VS+L A S G + G+ + H+ E+ GI+ ++D++ + G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 600 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 632
+ A + + +P R + W A++ IHG
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIHGQ 355
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/655 (37%), Positives = 368/655 (56%), Gaps = 14/655 (2%)
Query: 54 FQSCTKLHHVKRLHALLVVSGKIKTVFSSTKLVNFYANLGDLSFSRHTFDHISYRNVYTW 113
F + + K LH ++ G++ ST V YA G ++++R F+ + ++ ++
Sbjct: 25 FAATQSISKTKALHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSY 83
Query: 114 NSMISVYVRCGRLSEAVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVD---GKKIHCS 168
N +I +YVR G +A+ F + ++ G++ PD YT+P V KA L G +H
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRM-VSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142
Query: 169 VLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEA 228
+L+ F D +V +LL MY FG +AR +FD M RD SWN MISGY ++G +A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 229 LDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 288
L + D M E V +D T+ S+LPVC ++ G +H + + L + V N L+NM
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 289 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 348
Y K G M A VFD+M RDV++W +I Y + D A MQ G++P+ +T+
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 349 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 408
SL S+ + + +HG+ +R+ + D+II +++ MYAK ++ VF G
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVY-SDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 409 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 468
W+ +I G QN L S+A+ +F+ M ++ PN T S+LPAY+ + LRQ +
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAALADLRQAM 440
Query: 469 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS----VPWNAIISCH 524
IH + K + AT LV +Y KCG ++ A +F + V W A+IS +
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 525 GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPH 584
G+HG G AL F +M+ GV P+ ITF S L ACSHSGLV EG F M E +
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 585 LKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF 644
HY C+VDL GRAG L A+N I +P P +++WGALL AC H N++LG +A+++LF
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 645 EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV-NNKVD 698
E++ EN G YVL++NIYA +G+W+ +++VRS+ + GL+K PG S+IE+ +N VD
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNSVD 675
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 304,461,509
Number of Sequences: 539616
Number of extensions: 12844220
Number of successful extensions: 46778
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 35775
Number of HSP's gapped (non-prelim): 2399
length of query: 820
length of database: 191,569,459
effective HSP length: 126
effective length of query: 694
effective length of database: 123,577,843
effective search space: 85763023042
effective search space used: 85763023042
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)