Your job contains 1 sequence.
>003442
MTTSSNAVAIVPCSSFTCLCRSASKLYGEVKVSGLGFGVERAFVRVSNPCCSRRTHVATL
RYRLNAIDTRIVENAQTTATATVEIPVSCYQIIGVPNQAEKDEIVKSVMDLKRAEIEEGY
TMDAFMSRQDVLMDVRDKLLFEPEYAGNIRENIPPKPSLKIQWAWLPAALCLLQEVGEEK
LVLDIGRAALQHPNAKPYAHDFLLSMALAECAIAKVAFEKNNVSQGFEALARAQCLLRSK
VSLGNMPLLSQIEESLEELAPACTLELLGMPHSPENAERRRGAIAALRELIRQGLDVETS
CRVQDWPCFLSRALNRLMAAEVVDLLPWDDLAITRKNKKSLESQNQRVVIDFNCFYIALI
AHVALGFSSRQIELISKAKTICDCLIASESIDLKFEEAFCLFLLGQGTEAEAVEKLQQLE
LNSNPAMRSSFSGKEKKEISGAKPSVEMWLKDAVLSVFPDTQDCSPSLVNFFKGEKKTPA
IKKCKGPPQTPLTMSQRPLSSALASDGRDFEDSHTSIKSSRHLGSAVKQLTPTDLQSPLV
ASKNSNGNNVSPSSAQLERGLGLQRSKVWESWLAGRNGIERIAFAAVLGCIMFLAVKLSG
IRSNSVRNLSSSQQNMQMSSFVRTTDSSLDDSLGRTCIKRHGIASRLTELIKMVKLLFRN
TSDTLYSQSSCLPASLSTSNIAVTQRPMPLEEAEALVKQWQAIKAEALGPNHEVHSLSEA
LDESMLVQWEALADAAKARSCYWRFVLLQLTIVQADIISHGGVGEIAEIEAVLEEAAELV
DESQPKNPNYYSSYKIRYVLRKKDDGTWRFCKGDIQTPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003442
(819 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094143 - symbol:PARC6 "paralog of ARC6" speci... 2170 8.3e-225 1
TAIR|locus:2162341 - symbol:ARC6 "AT5G42480" species:3702... 227 2.4e-23 2
UNIPROTKB|Q55559 - symbol:sll0169 "Sll0169 protein" speci... 143 2.7e-09 2
>TAIR|locus:2094143 [details] [associations]
symbol:PARC6 "paralog of ARC6" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0043572
"plastid fission" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009528 "plastid inner membrane" evidence=IDA]
[GO:0010020 "chloroplast fission" evidence=IMP] [GO:0043621
"protein self-association" evidence=IPI] GO:GO:0016021
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000419
GO:GO:0009706 GO:GO:0010020 InterPro:IPR025344 Pfam:PF13355
EMBL:AY074283 IPI:IPI00536404 IPI:IPI00656912 RefSeq:NP_001030725.1
RefSeq:NP_188549.2 UniGene:At.42679 ProteinModelPortal:Q8VY16
SMR:Q8VY16 IntAct:Q8VY16 STRING:Q8VY16 PaxDb:Q8VY16 PRIDE:Q8VY16
EnsemblPlants:AT3G19180.1 GeneID:821452 KEGG:ath:AT3G19180
TAIR:At3g19180 eggNOG:NOG269839 HOGENOM:HOG000006302
InParanoid:Q8VY16 OMA:DFNCFYM PhylomeDB:Q8VY16
ProtClustDB:CLSN2690554 Genevestigator:Q8VY16 GO:GO:0009528
Uniprot:Q8VY16
Length = 819
Score = 2170 (768.9 bits), Expect = 8.3e-225, P = 8.3e-225
Identities = 449/823 (54%), Positives = 573/823 (69%)
Query: 10 IVPCSSFTCLC--RSASKLYG--EVKVSGLGFGVERAFVRVSNPCCSRRTHVATLRYRLN 65
++P S C RS S + E+++SGL V S R R RLN
Sbjct: 9 VLPSSCLLCGISNRSTSFVVDRPELQISGL-LVVRSESGEFFGSGLSLRRFQREGRRRLN 67
Query: 66 AID--TRIVENAQT------TATATVEIPVSCYQIIGVPNQAEKDEIVKSVMDLKRAEIE 117
A +V+NA + +T+T+E+PV+CYQ+IGV QAEKDE+VKSV++LK+ + E
Sbjct: 68 AAGGGIHVVDNAPSRTSSLAASTSTIELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAE 127
Query: 118 EGYTMDAFMSRQDVLMDVRDKLLFEPEYAGNIRENIPPKPSLKIQWAWLPAALCLLQEVG 177
EGYTM+A +RQD+LMDVRDKLLFE EYAGN++E I PK L+I WAWLP ALCLLQEVG
Sbjct: 128 EGYTMEAAAARQDLLMDVRDKLLFESEYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVG 187
Query: 178 EEKLVLDIGRAALQHPNAKPYAHDFLLSMALAECAIAKVAFEKNNVSQGFEALARAQCLL 237
+EKLVLDIGRAAL++ ++KPY HD LSMALAECAIAK AFE N VSQGFEALARAQ L
Sbjct: 188 QEKLVLDIGRAALRNLDSKPYIHDIFLSMALAECAIAKAAFEVNKVSQGFEALARAQSFL 247
Query: 238 RSKVSLGNMPXXXXXXXXXXXXAPACTLELLGMPHSPENAERRRGAIAALRELIRQGLDV 297
+SKV+LG + AP CTL+LLG+P +PENAERRRGAIAALREL+RQGL V
Sbjct: 248 KSKVTLGKLALLTQIEESLEELAPPCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSV 307
Query: 298 ETSCRVQDWPCFLSRALNRLMAAEVVDLLPWDDLAITRKNKKSLESQNQRVVIDFNCFYI 357
E SC++QDWPCFLS+A++RL+A E+VDLLPWDDLAITRKNKKSLES NQRVVIDFNCFY+
Sbjct: 308 EASCQIQDWPCFLSQAISRLLATEIVDLLPWDDLAITRKNKKSLESHNQRVVIDFNCFYM 367
Query: 358 ALIAHVALGFSSRQIELISKAKTICDCLIASESIDLKFEEAFCLFLLGQGTEAEAVEKLQ 417
L+ H+A+GFS +Q E I+KAKTIC+CLIASE +DLKFEEAFC FLL QG+EAEA+EKL+
Sbjct: 368 VLLGHIAVGFSGKQNETINKAKTICECLIASEGVDLKFEEAFCSFLLKQGSEAEALEKLK 427
Query: 418 QLELNSNPAMRSSFSGKEKKEISGAKPSVEMWLKDAVLSVFPDTQDCSPSLVNFFKGEKK 477
QLE NS+ A+R+S GKE + S A PS+E WL ++VL+ FPDT+ CSPSL NFF+ EKK
Sbjct: 428 QLESNSDSAVRNSILGKESRSTS-ATPSLEAWLMESVLANFPDTRGCSPSLANFFRAEKK 486
Query: 478 TPAIKKCKGPPQTPLTMSQRPLSSALASDGRDFEDSHTSIKSSRHLGSAVKQLTPTDLQS 537
P KK P +QRPLS+ F + SS+HL +AV+QLTPTDLQS
Sbjct: 487 YPENKKMGSPSIMNHKTNQRPLSTT------QF------VNSSQHLYTAVEQLTPTDLQS 534
Query: 538 PLVASKNSNGNNVSPSSAQLERGLGLQRSKVWESWLAGRNGIERIAFAAVLGCIMFLAVK 597
P+V++KN++ + S S QL+R LG+ ++K+W+ WL+ + I R++ A+LGC +F ++K
Sbjct: 535 PVVSAKNNDETSASMPSVQLKRNLGVHKNKIWDEWLSQSSLIGRVSVVALLGCTVFFSLK 594
Query: 598 LSGIRSNSVRNLXXXXXX---XXXXXFVRTTDSSLDDSLGRTCIKRHGIASRLTELIKMV 654
LSGIRS ++++ F+ T+S + + R+GI + LI M+
Sbjct: 595 LSGIRSGRLQSMPISVSARPHSESDSFLWKTESG-NFRKNLDSVNRNGIVGNIKVLIDML 653
Query: 655 KLLFRNTSDTLYSQSSCLPA-SLSTSNIAVTQRPMPLEEAEALVKQWQAIKAEALGPNHE 713
K+ D LY +SS A SLS S + +RPM EEAE LV+QW+ +KAEALGP H+
Sbjct: 654 KMHCGEHPDALYLKSSGQSATSLSHSASELHKRPMDTEEAEELVRQWENVKAEALGPTHQ 713
Query: 714 VHSLSEALDESMLVQWEALADAAKARSCYWRFVLLQLTIVQADIISHGGVGXXXXXXXXX 773
V+SLSE LDESMLVQW+ LA A+A+SCYWRFVLL L ++QA I G G
Sbjct: 714 VYSLSEVLDESMLVQWQTLAQTAEAKSCYWRFVLLHLEVLQAHIFEDGIAGEAAEIEALL 773
Query: 774 XXXXXXXDESQPKNPNYYSSYKIRYVLRKKDDGTWRFCKGDIQ 816
DESQPKN YYS+YKIRY+L+K++DG W+FC+ DIQ
Sbjct: 774 EEAAELVDESQPKNAKYYSTYKIRYILKKQEDGLWKFCQSDIQ 816
>TAIR|locus:2162341 [details] [associations]
symbol:ARC6 "AT5G42480" species:3702 "Arabidopsis
thaliana" [GO:0006457 "protein folding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0009706 "chloroplast inner
membrane" evidence=IDA] [GO:0010020 "chloroplast fission"
evidence=IMP] [GO:0031357 "integral to chloroplast inner membrane"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043621 "protein
self-association" evidence=IDA] [GO:0010207 "photosystem II
assembly" evidence=RCA] [GO:0009536 "plastid" evidence=IDA]
InterPro:IPR001623 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043621 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GO:GO:0010020 EMBL:AY221467 EMBL:AY221468 EMBL:AY221469
EMBL:AB016888 EMBL:AY091075 EMBL:AY150490 IPI:IPI00519663
RefSeq:NP_199063.1 UniGene:At.30169 ProteinModelPortal:Q9FIG9
SMR:Q9FIG9 IntAct:Q9FIG9 STRING:Q9FIG9 PaxDb:Q9FIG9 PRIDE:Q9FIG9
EnsemblPlants:AT5G42480.1 GeneID:834255 KEGG:ath:AT5G42480
TAIR:At5g42480 eggNOG:NOG26309 HOGENOM:HOG000030734
InParanoid:Q9FIG9 OMA:EEITPRC PhylomeDB:Q9FIG9
ProtClustDB:CLSN2686596 Genevestigator:Q9FIG9 GO:GO:0031357
InterPro:IPR025344 Pfam:PF13355 Uniprot:Q9FIG9
Length = 801
Score = 227 (85.0 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 101/413 (24%), Positives = 173/413 (41%)
Query: 83 VEIPVSCYQIIGVPNQAEKDEIVKSVMDLKRAEIEEGYTMDAFMSRQDVLMDVRDKLLFE 142
V IP+ YQ++G D I ++ + G++ DA +SR+ +L + L
Sbjct: 84 VPIPIDFYQVLGAQTHFLTDGIRRAFEARVSKPPQFGFSDDALISRRQILQAACETLS-N 142
Query: 143 P----EYAGNIRENIPPKPSLKIQWAWLPAALCLLQEVGEEKLVLDIGRAALQHPNAKPY 198
P EY + ++ + W +P ALC+LQE GE ++VL +G A L+ K +
Sbjct: 143 PRSRREYNEGLLDDEEATVITDVPWDKVPGALCVLQEGGETEIVLRVGEALLKERLPKSF 202
Query: 199 AHDFLLSMALAECAIAK--VAFEKNNVSQGFEALARAQCLLRSKVSLGNMPXXXXXXXXX 256
D +L MALA +++ +A + + G+E + A LL+ + + P
Sbjct: 203 KQDVVLVMALAFLDVSRDAMALDPPDFITGYEFVEEALKLLQEEGASSLAPDLRAQIDET 262
Query: 257 XXX-APACTLELLGMPHSPENAERRRGAIAALRELIRQGLDVETSCRVQDWPC--FLSRA 313
P LELLG+P + A +R ++ +R ++ S V F++ A
Sbjct: 263 LEEITPRYVLELLGLPLGDDYAAKRLNGLSGVRNILWSVGGGGASALVGGLTREKFMNEA 322
Query: 314 LNRLMAAEVVDLLPWDDLAITRKN--KKSLESQNQRVVIDFNCFYIALIAHVALGFSSRQ 371
R+ AAE VDL T N +S E + + F I H+ L + +Q
Sbjct: 323 FLRMTAAEQVDLF-----VATPSNIPAESFEVYEVALALVAQAF-IGKKPHL-LQDADKQ 375
Query: 372 IELISKAKTICDCLIA-------SESIDLKFEEAFCLFLLGQGTEAEAVEKLQQLELN-S 423
+ + +AK + + A + ID E C L+G+ E L +
Sbjct: 376 FQQLQQAKVMAMEIPAMLYDTRNNWEIDFGLERGLCALLIGKVDECRMWLGLDSEDSQYR 435
Query: 424 NPAM----RSSFSGKEKKEISGAKPSVEMWLKDAVLSVFPDTQDCSPSLVNFF 472
NPA+ + + + ++ G +E WL V F DT+D L +++
Sbjct: 436 NPAIVEFVLENSNRDDNDDLPGLCKLLETWLAGVVFPRFRDTKDKKFKLGDYY 488
Score = 129 (50.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 51/201 (25%), Positives = 83/201 (41%)
Query: 624 TTDSSLDDSLGRTCIK--RHGIASRLTELIKMVKLLFRNTSDTLYSQSSCLPASLST--S 679
T + S+ D L +K G+A L L L ++S S + + ++T S
Sbjct: 603 TVEMSVADMLKEASVKILAAGVAIGLISLFSQKYFLKSSSSFQRKDMVSSMESDVATIGS 662
Query: 680 NIAVTQRPMPLEEA---EALVKQWQAIKAEALGPNHEVHSLSEALDESMLVQW-EALADA 735
A +P +A E +V +WQ IK+ A GP+H + L E LD ML W + A+
Sbjct: 663 VRADDSEALPRMDARTAENIVSKWQKIKSLAFGPDHRIEMLPEVLDGRMLKIWTDRAAET 722
Query: 736 AKARSCYWRFVLLQLTIVQADIISHGGVGXXXXXXXXXXXXXXXXDESQPKN-PNYYSSY 794
A+ Y + LL+L++ D ++ G D P+N +Y
Sbjct: 723 AQLGLVY-DYTLLKLSV---DSVTVSADGTRALVEATLEESACLSDLVHPENNATDVRTY 778
Query: 795 KIRYVLRKKDDGTWRFCKGDI 815
RY + G W+ +G +
Sbjct: 779 TTRYEVFWSKSG-WKITEGSV 798
>UNIPROTKB|Q55559 [details] [associations]
symbol:sll0169 "Sll0169 protein" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0000917 "barrier
septum assembly" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030428 "cell septum" evidence=IDA]
InterPro:IPR001623 Pfam:PF00226 GO:GO:0000917 EMBL:BA000022
GenomeReviews:BA000022_GR Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 eggNOG:NOG26309 InterPro:IPR025344
Pfam:PF13355 HSSP:P08622 PIR:S76082 RefSeq:NP_441990.1
RefSeq:YP_005652050.1 ProteinModelPortal:Q55559 IntAct:Q55559
STRING:Q55559 GeneID:12253262 GeneID:952773 KEGG:syn:sll0169
KEGG:syy:SYNGTS_2097 PATRIC:23841546 HOGENOM:HOG000035602
OMA:QEHTIAN ProtClustDB:CLSK919665 Uniprot:Q55559
Length = 714
Score = 143 (55.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 134/571 (23%), Positives = 235/571 (41%)
Query: 85 IPVSCYQIIGVPNQAEKDEIVKSVMD----LKRAEIEEG-YTM-DAFMS-RQDVLMDVRD 137
IP+ Y+I+G+P Q+ + I ++ D L R E + T+ + ++ + L D
Sbjct: 3 IPLDFYRILGIPPQSGGETIEQAYQDRLLQLPRREFSDAAVTLRNQLLAIAYETLRDPEK 62
Query: 138 KLLFEPEYAGN----IRENIP-PKPSLKIQWAWLPAALCLLQEVGEEKLVLDIGRAALQH 192
+ ++ E+ G + E +P P L+ AL +L ++GE +LV+ G L
Sbjct: 63 RQAYDQEWWGAMDEALGEALPLTTPELECSPEQEIGALLILLDLGEYELVVKYGEPVLHD 122
Query: 193 PN--AKPYAHDFLLSMALAECAIAKVAFEKNNVSQGFEALARAQCLLRSKVSLGNMPXXX 250
PN A D+LLS+ LA +++ +++ F A A + L R + + P
Sbjct: 123 PNPPAGGLPQDYLLSVILAHWELSRERWQQQQYE--FAATASLKALARLQQD-NDFPALE 179
Query: 251 XXXXXXXXXA-PACTLELLGMPHSPENAERRRGAIAALRELIRQGLDVETSCRVQDWPCF 309
P LELL E E+R+ +A L+ +++ +E + +D+
Sbjct: 180 AEIRQELYRLRPYRILELLAKEGQGE--EQRQQGLALLQAMVQDRGGIEG--KGEDYS-- 233
Query: 310 LSRALNRLMAAEVVDLLPWDDLAITRKNKKSL-ESQNQRVVIDFNCFYIALIAHVALGFS 368
L + + L L + +N L ESQ +V Y+A+ + +A G
Sbjct: 234 ---GLGNDDFLKFIHQLRCH-LTVAEQNALFLPESQRPSLVAS----YLAVHSLMAEGVK 285
Query: 369 SRQIELISKAKTICDCLIASESI-DLKFEEAFCLFLLGQGTEA--EAVEK--------LQ 417
+ I +AK++ +I E+ DL E+ C LLGQ TE A+++ L+
Sbjct: 286 EQDPMAIVEAKSL---IIQLENCQDLALEKVICELLLGQ-TEVVLAAIDQGDPKIVAGLE 341
Query: 418 -QLELNSNPAMRSSFSGKEK----------KEISGA---------KPSVEMWLKDAVLSV 457
+L +P + + ++ E+ +++S PSV+ +L+
Sbjct: 342 SKLATGEDP-LTAFYTFTEQWLEEEIVPYFRDLSPETLSPKAYFNNPSVQQYLEQLEPDS 400
Query: 458 FP-DTQDCSPSLVNFFKGEKKTPAIKKCKGPPQTPLTMSQRPLSSALASDGRDFEDSHTS 516
F D SP+L++ E +TP + P PLT S P S S R +D S
Sbjct: 401 FTTDNSFASPALLSTAT-ESETPMVHSSAALPDRPLT-STVP-SRRGRSPRRSRDDVFPS 457
Query: 517 IKSSRHLGSAVKQLTPT---DLQS----PLVASKNSNGNNVSPSSAQLERGLGLQRSKVW 569
+S G AV L+P D S + SNG + + + + +R K
Sbjct: 458 ADNSS--GLAVTTLSPAIAYDTHSLGTNGIGGDSTSNGFSSNSAPESTSKHKSPRRRKKR 515
Query: 570 ESWLAGRNGIERIAFAAVLGCIMFLAVKLSG 600
+ R GI + A ++G L + +G
Sbjct: 516 VTIKPVRFGIFLLCLAGIVGGATALIINRTG 546
Score = 80 (33.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 657 LFRNTSDTLYSQ-SSCLPASLSTSNIAVTQRPMPLEEAEALVKQWQAIKAEALGPNHEVH 715
L + D Q S +P ++ N+ ++Q + + +V+ W K A G N++V
Sbjct: 552 LLEDPLDVFLDQPSEFIPDEATSRNLILSQPNFNQQVGQMVVQGWLDSKKLAFGQNYDVG 611
Query: 716 SLSEALDESMLVQWEALADAAKARSCYWRFV-LLQLTIVQAD 756
+L L ++L Q A +A+ Y ++ LQ+ Q +
Sbjct: 612 ALQSVLAPNLLAQQRGRAQRDQAQKVYHQYEHKLQILAYQVN 653
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 819 780 0.00094 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 630 (67 KB)
Total size of DFA: 386 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.67u 0.13s 64.80t Elapsed: 00:00:03
Total cpu time: 64.67u 0.13s 64.80t Elapsed: 00:00:03
Start: Tue May 21 07:45:48 2013 End: Tue May 21 07:45:51 2013