BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003444
(819 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2XTZ|A Chain A, Crystal Structure Of The G Alpha Protein Atgpa1 From
Arabidopsis Thaliana
pdb|2XTZ|B Chain B, Crystal Structure Of The G Alpha Protein Atgpa1 From
Arabidopsis Thaliana
pdb|2XTZ|C Chain C, Crystal Structure Of The G Alpha Protein Atgpa1 From
Arabidopsis Thaliana
Length = 354
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 43/278 (15%)
Query: 531 LQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERF 590
++KLLL+G SG STIFKQ K+L++ F + E ++ I +N Y + +L +G + F
Sbjct: 9 IRKLLLLGAGESGKSTIFKQIKLLFQT-GFDEGELKSYVPVIHANVYQTIKLLHDGTKEF 67
Query: 591 EEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPA 650
+ +D + SS+S IG +L + + G L+ +P
Sbjct: 68 AQ---------NETDSAKYMLSSESI------AIGEKL---------SEIGGRLD--YPR 101
Query: 651 ATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYA 710
T++ + +E LWKD AIQ T +R +EL++ Y +E + +S +Y P+ D+LYA
Sbjct: 102 LTKDIAEGIETLWKDPAIQETXARGNELQV-PDXTKYLMENLKRLSDINYIPTKEDVLYA 160
Query: 711 EGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDI 770
+ G+ + FS P + S + Y+L V + E KW+ +FE +
Sbjct: 161 R--VRTTGVVEIQFS-PVGENKKSGEV---------YRLFDVGGQR-NERRKWIHLFEGV 207
Query: 771 GMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIV 808
VIFC A+S+YDQ + N+MM +++ F+ ++
Sbjct: 208 TAVIFCAAISEYDQTLFEDEQK--NRMMETKELFDWVL 243
>pdb|1SHZ|A Chain A, Crystal Structure Of The P115rhogef Rgrgs Domain In A
Complex With Galpha(13):galpha(i1) Chimera
pdb|1SHZ|D Chain D, Crystal Structure Of The P115rhogef Rgrgs Domain In A
Complex With Galpha(13):galpha(i1) Chimera
Length = 340
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 119/275 (43%), Gaps = 49/275 (17%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG ST KQ +I++ F E + I SN + +L++ RE+
Sbjct: 14 KLLLLGAGESGKSTFLKQMRIIH-GQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLH- 71
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
P G + + G +L AF D G +E
Sbjct: 72 ---------------IPWGDNKNQ------LHGDKLMAF-DTRAPMAAQGMVET---RVF 106
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
+Y P + LW+D+ IQ Y RR E ++ SV YFL+ + + DY PS DIL A
Sbjct: 107 LQYLPAIRALWEDSGIQNAYDRRREFQLGESV-KYFLDNLDKLGVPDYIPSQQDILLARR 165
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
T G+ F+F L +++ V + E KW E FE +
Sbjct: 166 PTK--GIHETHFTFKD----------------LHFKMFDVGGQR-SERKKWFECFEGVTA 206
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYDQ ++ + N+M S K F+SI
Sbjct: 207 IIFCVALSDYDQVLMEDRQT--NRMHESMKLFDSI 239
>pdb|1GG2|A Chain A, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1
Gamma_2 With Gdp Bound
pdb|1GIT|A Chain A, Structure Of Gtp-Binding Protein
Length = 353
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 6 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 64
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 65 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 108 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 150
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 151 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD---------------- 192
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V A+ E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 193 LHFKMFDVGAQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 249
Query: 805 ESI 807
+SI
Sbjct: 250 DSI 252
>pdb|2ODE|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs8 And Activated Gi Alpha 3
pdb|2ODE|C Chain C, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs8 And Activated Gi Alpha 3
pdb|2V4Z|A Chain A, The Crystal Structure Of The Human G-Protein Subunit Alpha
( Gnai3) In Complex With An Engineered Regulator Of G-
Protein Signaling Type 2 Domain (Rgs2)
Length = 350
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++ +S+DE
Sbjct: 6 AEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHED-GYSEDE 64
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K+ + SN + ++ R + + GE ++ + D + ++
Sbjct: 65 CKQYKVVVYSNTIQSIIAIIRAMGRLKID-FGE--------------AARADDARQLF-- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G+ E T E + +++ LW+D +QA +SR E + L+
Sbjct: 108 --------------VLAGSAEE--GVMTPELAGVIKRLWRDGGVQACFSRSREYQ-LNDS 150
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
ASY+L + IS+++Y P+ D+L T+ G+ F+F
Sbjct: 151 ASYYLNDLDRISQSNYIPTQQDVLRTRVKTT--GIVETHFTFKD---------------- 192
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 193 LYFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 249
Query: 805 ESI 807
+SI
Sbjct: 250 DSI 252
>pdb|2IHB|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs10 And Activated Gi Alpha 3
Length = 323
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++ +S+DE + K+ + SN + ++ R +
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHED-GYSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKI 62
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ GE ++ + D + ++ +++G+ E T
Sbjct: 63 D-FGE--------------AARADDARQLF----------------VLAGSAEE--GVMT 89
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LW+D +QA +SR E + L+ ASY+L + IS+++Y P+ D+L
Sbjct: 90 PELAGVIKRLWRDGGVQACFSRSREYQ-LNDSASYYLNDLDRISQSNYIPTQQDVLRTR- 147
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 148 -VKTTGIVETHFTFKD----------------LYFKMFDVGGQR-SERKKWIHCFEGVTA 189
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 190 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 222
>pdb|3UMR|A Chain A, Crystal Structure Of The G202d Mutant Of Human G-Alpha-I1
Length = 354
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 7 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 65
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + G+ S+ + D + ++
Sbjct: 66 CKQYKAVVYSNTIQSIIAIIRAMGRLKID-FGD--------------SARADDARQLF-- 108
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 109 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 151
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L T+ G+ F+F
Sbjct: 152 AAYYLNDLDRIAQPNYIPTQQDVLRTRVKTT--GIVETHFTFKD---------------- 193
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 194 LHFKMFDVDGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 250
Query: 805 ESI 807
+SI
Sbjct: 251 DSI 253
>pdb|4G5O|A Chain A, Structure Of Lgn Gl4GALPHAI3(Q147L) COMPLEX
pdb|4G5O|B Chain B, Structure Of Lgn Gl4GALPHAI3(Q147L) COMPLEX
pdb|4G5O|C Chain C, Structure Of Lgn Gl4GALPHAI3(Q147L) COMPLEX
pdb|4G5O|D Chain D, Structure Of Lgn Gl4GALPHAI3(Q147L) COMPLEX
Length = 330
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++ +S+DE + K+ + SN + ++ R +
Sbjct: 11 KLLLLGAGESGKSTIVKQMKIIHED-GYSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKI 69
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ GE ++ + D + ++ +++G+ E T
Sbjct: 70 D-FGE--------------AARADDARQLF----------------VLAGSAEE--GVMT 96
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LW+D +QA +SR E +L+ ASY+L + IS+++Y P+ D+L
Sbjct: 97 PELAGVIKRLWRDGGVQACFSRSREY-LLNDSASYYLNDLDRISQSNYIPTQQDVLRTR- 154
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 155 -VKTTGIVETHFTFKD----------------LYFKMFDVGGQR-SERKKWIHCFEGVTA 196
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 197 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 229
>pdb|3UMS|A Chain A, Crystal Structure Of The G202a Mutant Of Human G-Alpha-I1
Length = 354
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 142/303 (46%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 7 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 65
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + G+ S+ + D + ++
Sbjct: 66 CKQYKAVVYSNTIQSIIAIIRAMGRLKID-FGD--------------SARADDARQLF-- 108
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 109 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 151
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 152 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD---------------- 193
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 194 LHFKMFDVAGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 250
Query: 805 ESI 807
+SI
Sbjct: 251 DSI 253
>pdb|4G5R|A Chain A, Structure Of Lgn Gl4GALPHAI3 COMPLEX
pdb|4G5R|B Chain B, Structure Of Lgn Gl4GALPHAI3 COMPLEX
pdb|4G5R|C Chain C, Structure Of Lgn Gl4GALPHAI3 COMPLEX
pdb|4G5R|D Chain D, Structure Of Lgn Gl4GALPHAI3 COMPLEX
pdb|4G5S|A Chain A, Structure Of Lgn Gl3GALPHAI3 COMPLEX
pdb|4G5S|B Chain B, Structure Of Lgn Gl3GALPHAI3 COMPLEX
pdb|4G5S|C Chain C, Structure Of Lgn Gl3GALPHAI3 COMPLEX
pdb|4G5S|D Chain D, Structure Of Lgn Gl3GALPHAI3 COMPLEX
Length = 330
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++ +S+DE + K+ + SN + ++ R +
Sbjct: 11 KLLLLGAGESGKSTIVKQMKIIHED-GYSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKI 69
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ GE ++ + D + ++ +++G+ E T
Sbjct: 70 D-FGE--------------AARADDARQLF----------------VLAGSAEE--GVMT 96
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LW+D +QA +SR E + L+ ASY+L + IS+++Y P+ D+L
Sbjct: 97 PELAGVIKRLWRDGGVQACFSRSREYQ-LNDSASYYLNDLDRISQSNYIPTQQDVLRTR- 154
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 155 -VKTTGIVETHFTFKD----------------LYFKMFDVGGQR-SERKKWIHCFEGVTA 196
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 197 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 229
>pdb|3FFA|A Chain A, Crystal Structure Of A Fast Activating G Protein Mutant
pdb|3FFB|A Chain A, Gi-Alpha-1 Mutant In Gdp Bound Form
Length = 360
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 57/310 (18%)
Query: 499 SLPVPSKSSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKA 557
S+ + + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A
Sbjct: 6 SMGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA 65
Query: 558 VPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTD 617
+S++E + K + SN + ++ R + + R + D
Sbjct: 66 -GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADD 109
Query: 618 GKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSE 677
+ ++ +++G E F A E + +++ LWKD+ +QA ++R E
Sbjct: 110 ARQLF----------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSRE 151
Query: 678 LEMLSSVASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDT 737
+ L+ A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 152 YQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD--------- 199
Query: 738 ADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKM 797
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M
Sbjct: 200 -------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRM 249
Query: 798 MLSRKFFESI 807
S K F+SI
Sbjct: 250 HESMKLFDSI 259
>pdb|1GIL|A Chain A, Structure Of Active Conformations Of Gia1 And The
Mechanism Of Gtp Hydrolysis
Length = 353
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 6 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 64
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 65 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 108 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 150
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F D H +
Sbjct: 151 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFK-----------DLHFKM 197
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
+R E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 198 FDVGGLR------SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 249
Query: 805 ESI 807
+SI
Sbjct: 250 DSI 252
>pdb|2ZJY|A Chain A, Structure Of The K349p Mutant Of Gi Alpha 1 Subunit Bound
To Alf4 And Gdp
pdb|2ZJZ|A Chain A, Structure Of The K349p Mutant Of Gi Alpha 1 Subunit Bound
To Gdp
pdb|2ZJZ|B Chain B, Structure Of The K349p Mutant Of Gi Alpha 1 Subunit Bound
To Gdp
Length = 356
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 9 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 67
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 68 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 110
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 111 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 153
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 154 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD---------------- 195
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 196 LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 252
Query: 805 ESI 807
+SI
Sbjct: 253 DSI 255
>pdb|1GP2|A Chain A, G Protein Heterotrimer Gi_alpha_1 Beta_1 Gamma_2 With Gdp
Bound
pdb|1AGR|A Chain A, Complex Of Alf4-Activated Gi-Alpha-1 With Rgs4
pdb|1AGR|D Chain D, Complex Of Alf4-Activated Gi-Alpha-1 With Rgs4
pdb|1CIP|A Chain A, Gi-Alpha-1 Subunit Of Guanine Nucleotide-Binding Protein
Complexed With A Gtp Analogue
pdb|1BOF|A Chain A, Gi-Alpha-1 Bound To Gdp And Magnesium
pdb|1GDD|A Chain A, Tertiary And Quaternary Structural Changes In Gia1 Induced
By Gtp Hydrolysis
pdb|1GFI|A Chain A, Structures Of Active Conformations Of Gi Alpha 1 And The
Mechanism Of Gtp Hydrolysis
pdb|1GIA|A Chain A, Structure Of Active Conformations Of Gia1 And The
Mechanism Of Gtp Hydrolysis
Length = 353
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 6 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 64
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 65 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 108 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 150
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 151 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD---------------- 192
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 193 LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 249
Query: 805 ESI 807
+SI
Sbjct: 250 DSI 252
>pdb|3C7K|A Chain A, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
pdb|3C7K|C Chain C, Molecular Architecture Of Galphao And The Structural Basis
For Rgs16-Mediated Deactivation
Length = 333
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 122/285 (42%), Gaps = 61/285 (21%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++ FS ++ + K + SN L ++ +
Sbjct: 14 KLLLLGAGESGKSTIVKQMKIIHED-GFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGV 72
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKA---FSDWLLKTMVSGNLEAIFP 649
E G+K +K TD K + + R++ FS LL M+
Sbjct: 73 E-YGDKERK--------------TDSKMVCDVVSRMEDTEPFSAELLSAMM--------- 108
Query: 650 AATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILY 709
LW D+ IQ ++R E + L+ A Y+L+ + I DY+P++ DIL
Sbjct: 109 -----------RLWGDSGIQECFNRSREYQ-LNDSAKYYLDSLDRIGAGDYQPTEQDILR 156
Query: 710 AEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFED 769
+ G+ F+F L ++L V + E KW+ FED
Sbjct: 157 TR--VKTTGIVETHFTFKN----------------LHFRLFDVGGQR-SERKKWIHCFED 197
Query: 770 IGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTIQLLI 814
+ +IFCVALS YDQ V N+M S F+SI + I
Sbjct: 198 VTAIIFCVALSGYDQ--VLHEDETTNRMHESLMLFDSICNNKFFI 240
>pdb|3ONW|A Chain A, Structure Of A G-Alpha-I1 Mutant With Enhanced Affinity
For The Rgs14 Goloco Motif.
pdb|3ONW|B Chain B, Structure Of A G-Alpha-I1 Mutant With Enhanced Affinity
For The Rgs14 Goloco Motif
Length = 328
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 9 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 67
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 68 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 95
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E +L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 96 -ELAGVIKRLWKDSGVQACFNRSREY-LLNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 152
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 153 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 194
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 195 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 227
>pdb|1AS0|A Chain A, Gtp-Gamma-S Bound G42v Gia1
pdb|1AS2|A Chain A, Gdp+pi Bound G42v Gia1
pdb|1AS3|A Chain A, Gdp Bound G42v Gia1
Length = 353
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 6 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAVESGKSTIVKQMKIIHEA-GYSEEE 64
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 65 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 108 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 150
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 151 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD---------------- 192
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 193 LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 249
Query: 805 ESI 807
+SI
Sbjct: 250 DSI 252
>pdb|2XNS|A Chain A, Crystal Structure Of Human G Alpha I1 Bound To A Designed
Helical Peptide Derived From The Goloco Motif Of Rgs14
pdb|2XNS|B Chain B, Crystal Structure Of Human G Alpha I1 Bound To A Designed
Helical Peptide Derived From The Goloco Motif Of Rgs14
Length = 327
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 8 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 66
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 67 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 94
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 95 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 151
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 152 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 193
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 194 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 226
>pdb|1KJY|A Chain A, Crystal Structure Of Human G[alpha]i1 Bound To The Goloco
Motif Of Rgs14
pdb|1KJY|C Chain C, Crystal Structure Of Human G[alpha]i1 Bound To The Goloco
Motif Of Rgs14
pdb|2OM2|A Chain A, Crystal Structure Of Human G[alpha]i1 Bound To The Goloco
Motif Of Rgs14
pdb|2OM2|C Chain C, Crystal Structure Of Human G[alpha]i1 Bound To The Goloco
Motif Of Rgs14
Length = 325
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 6 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 64
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 65 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 92
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 93 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 149
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 150 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 191
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 192 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 224
>pdb|1Y3A|A Chain A, Structure Of G-Alpha-I1 Bound To A Gdp-Selective Peptide
Provides Insight Into Guanine Nucleotide Exchange
pdb|1Y3A|B Chain B, Structure Of G-Alpha-I1 Bound To A Gdp-Selective Peptide
Provides Insight Into Guanine Nucleotide Exchange
pdb|1Y3A|C Chain C, Structure Of G-Alpha-I1 Bound To A Gdp-Selective Peptide
Provides Insight Into Guanine Nucleotide Exchange
pdb|1Y3A|D Chain D, Structure Of G-Alpha-I1 Bound To A Gdp-Selective Peptide
Provides Insight Into Guanine Nucleotide Exchange
Length = 329
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 10 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 68
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 69 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 96
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 97 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 153
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 154 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 195
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 196 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 228
>pdb|4G5Q|A Chain A, Structure Of Lgn Gl4GALPHAI1 COMPLEX
pdb|4G5Q|B Chain B, Structure Of Lgn Gl4GALPHAI1 COMPLEX
pdb|4G5Q|C Chain C, Structure Of Lgn Gl4GALPHAI1 COMPLEX
pdb|4G5Q|D Chain D, Structure Of Lgn Gl4GALPHAI1 COMPLEX
Length = 330
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 11 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 69
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 70 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 97
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 98 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 154
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 155 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 196
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 197 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 229
>pdb|3QI2|A Chain A, A Galpha P-Loop Mutation Prevents Transition To The
Activated State: G42r Bound To Rgs14 Goloco
pdb|3QI2|B Chain B, A Galpha P-Loop Mutation Prevents Transition To The
Activated State: G42r Bound To Rgs14 Goloco
Length = 328
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 9 KLLLLGARESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 67
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 68 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 95
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 96 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRV 153
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
T+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 154 KTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 194
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 195 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 227
>pdb|2GTP|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs1 And Activated Gi Alpha 1
pdb|2GTP|B Chain B, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs1 And Activated Gi Alpha 1
Length = 323
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 62
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 63 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 90
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 91 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 147
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 148 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 189
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 190 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 222
>pdb|2IK8|A Chain A, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs16 And Activated Gi Alpha 1
pdb|2IK8|C Chain C, Crystal Structure Of The Heterodimeric Complex Of Human
Rgs16 And Activated Gi Alpha 1
Length = 324
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 5 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 63
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 64 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 91
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 92 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 148
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 149 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 190
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 191 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 223
>pdb|1SVK|A Chain A, Structure Of The K180p Mutant Of Gi Alpha Subunit Bound To
Alf4 And Gdp
pdb|1SVS|A Chain A, Structure Of The K180p Mutant Of Gi Alpha Subunit Bound To
Gppnhp
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI+++A +S++E
Sbjct: 6 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEA-GYSEEE 64
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 65 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 108 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 150
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L T+ G+ F+F
Sbjct: 151 AAYYLNDLDRIAQPNYIPTQQDVLRTRVPTT--GIVETHFTFKD---------------- 192
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 193 LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 249
Query: 805 ESI 807
+SI
Sbjct: 250 DSI 252
>pdb|2G83|A Chain A, Structure Of Activated G-alpha-i1 Bound To A Nucleotide-
State-selective Peptide: Minimal Determinants For
Recognizing The Active Form Of A G Protein Alpha Subunit
pdb|2G83|B Chain B, Structure Of Activated G-alpha-i1 Bound To A Nucleotide-
State-selective Peptide: Minimal Determinants For
Recognizing The Active Form Of A G Protein Alpha Subunit
Length = 313
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 3 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 61
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 62 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 89
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 90 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 146
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 147 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 188
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 189 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 221
>pdb|3QE0|A Chain A, A Galpha-I1 P-Loop Mutation Prevents Transition To The
Activated State
pdb|3QE0|B Chain B, A Galpha-I1 P-Loop Mutation Prevents Transition To The
Activated State
pdb|3QE0|C Chain C, A Galpha-I1 P-Loop Mutation Prevents Transition To The
Activated State
Length = 325
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 6 KLLLLGARESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 64
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ G+ S+ + D + ++ +++G E F A
Sbjct: 65 D-FGD--------------SARADDARQLF----------------VLAGAAEEGFMTA- 92
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 93 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTRV 150
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
T+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 151 KTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 191
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 192 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 224
>pdb|3D7M|A Chain A, Crystal Structure Of The G Protein Fast-Exchange Double
Mutant I56cQ333C
Length = 354
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 57/303 (18%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQ-KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + E+ + KLLL+G SG STI KQ KI ++A +S++E
Sbjct: 7 AEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKICHEA-GYSEEE 65
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ K + SN + ++ R + + R + D + ++
Sbjct: 66 CKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAAR---------------ADDARQLF-- 108
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
+++G E F A E + +++ LWKD+ +QA ++R E + L+
Sbjct: 109 --------------VLAGAAEEGFMTA--ELAGVIKRLWKDSGVQACFNRSREYQ-LNDS 151
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
A+Y+L + I++ +Y P+ D+L + G+ F+F
Sbjct: 152 AAYYLNDLDRIAQPNYIPTQQDVLRTR--VKTTGIVETHFTFKD---------------- 193
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
L +++ V + E KW+ FE + +IFCVALSDYD V MN+M S K F
Sbjct: 194 LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDL--VLAEDEEMNRMHESMKLF 250
Query: 805 ESI 807
+SI
Sbjct: 251 DSI 253
>pdb|1BH2|A Chain A, A326s Mutant Of An Inhibitory Alpha Subunit
Length = 315
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++A +S++E + K + SN + ++ R +
Sbjct: 4 KLLLLGAGESGKSTIVKQMKIIHEA-GYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKI 62
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ R + D + ++ +++G E F A
Sbjct: 63 DFGDAAR---------------ADDARQLF----------------VLAGAAEEGFMTA- 90
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
E + +++ LWKD+ +QA ++R E + L+ A+Y+L + I++ +Y P+ D+L
Sbjct: 91 -ELAGVIKRLWKDSGVQACFNRSREYQ-LNDSAAYYLNDLDRIAQPNYIPTQQDVLRTR- 147
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ F+F L +++ V + E KW+ FE +
Sbjct: 148 -VKTTGIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTA 189
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 190 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 222
>pdb|1ZCB|A Chain A, Crystal Structure Of G Alpha 13 In Complex With Gdp
pdb|3AB3|A Chain A, Crystal Structure Of P115rhogef Rgs Domain In Complex With
G Alpha 13
pdb|3AB3|C Chain C, Crystal Structure Of P115rhogef Rgs Domain In Complex With
G Alpha 13
Length = 362
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 50/304 (16%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRT-LQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + ER L K+LL+G SG ST KQ +I++ F
Sbjct: 7 AEDKAAVERSKMIDRNLREDGERSARLVKILLLGAGESGKSTFLKQMRIIH-GQDFDQRA 65
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
E + I SN + +L++ RE+ P G + +
Sbjct: 66 REEFRPTIYSNVIKGMRVLVDAREKLH----------------IPWGDNKNQ------LH 103
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
G +L AF D G +E +Y P + LW+D+ IQ Y RR E ++ SV
Sbjct: 104 GDKLMAF-DTRAPMAAQGMVET---RVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESV 159
Query: 685 ASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSL 744
YFL+ + + DY PS DIL A T G+ DF ++ VD Q
Sbjct: 160 -KYFLDNLDKLGVPDYIPSQQDILLARRPTK--GIHEYDFEI-KNVPFKMVDVGGQR--- 212
Query: 745 LRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFF 804
E +W E F+ + ++F V+ S++DQ ++ + N++ S F
Sbjct: 213 -------------SERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQT--NRLTESLNIF 257
Query: 805 ESIV 808
E+IV
Sbjct: 258 ETIV 261
>pdb|3CX7|A Chain A, Crystal Structure Of Pdzrhogef Rgrgs Domain In A Complex
With Galpha-13 Bound To Gdp-Alf4
pdb|3CX8|A Chain A, Crystal Structure Of Pdzrhogef Rgrgs Domain In A Complex
With Galpha-13 Bound To Gtp-Gamma-S
Length = 338
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 51/284 (17%)
Query: 525 YIERRTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILL 584
Y++R L K+LL+G SG ST KQ +I++ F E + I SN + +L+
Sbjct: 5 YVKR--LVKILLLGAGESGKSTFLKQMRIIH-GQDFDQRAREEFRPTIYSNVIKGMRVLV 61
Query: 585 EGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNL 644
+ RE+ P G + + G +L AF D G +
Sbjct: 62 DAREKLH----------------IPWGDNKNQ------LHGDKLMAF-DTRAPMAAQGMV 98
Query: 645 EAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSD 704
E +Y P + LW+D+ IQ Y RR E ++ SV YFL+ + + DY PS
Sbjct: 99 ET---RVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESV-KYFLDNLDKLGVPDYIPSQ 154
Query: 705 LDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWL 764
DIL A T G+ DF ++ VD Q E +W
Sbjct: 155 QDILLARRPTK--GIHEYDFEI-KNVPFKMVDVGGQR----------------SERKRWF 195
Query: 765 EMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIV 808
E F+ + ++F V+ S++DQ ++ + N++ S FE+IV
Sbjct: 196 ECFDSVTSILFLVSSSEFDQVLMEDRQT--NRLTESLNIFETIV 237
>pdb|3CX6|A Chain A, Crystal Structure Of Pdzrhogef Rgrgs Domain In A Complex
With Galpha-13 Bound To Gdp
Length = 338
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 121/285 (42%), Gaps = 53/285 (18%)
Query: 525 YIERRTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILL 584
Y++R L K+LL+G SG ST KQ +I++ F E + I SN + +L+
Sbjct: 5 YVKR--LVKILLLGAGESGKSTFLKQMRIIH-GQDFDQRAREEFRPTIYSNVIKGMRVLV 61
Query: 585 EGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNL 644
+ RE+ P G + + G +L AF D G +
Sbjct: 62 DAREKLH----------------IPWGDNKNQ------LHGDKLMAF-DTRAPMAAQGMV 98
Query: 645 EAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSD 704
E +Y P + LW+D+ IQ Y RR E ++ SV YFL+ + + DY PS
Sbjct: 99 ET---RVFLQYLPAIRALWEDSGIQNAYDRRREFQLGESV-KYFLDNLDKLGVPDYIPSQ 154
Query: 705 LDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGL-GENCKW 763
DIL A T G+ DF ++ VD GL E +W
Sbjct: 155 QDILLARRPTK--GIHEYDFEI-KNVPFKMVDVG-----------------GLRSERKRW 194
Query: 764 LEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIV 808
E F+ + ++F V+ S++DQ ++ + N++ S FE+IV
Sbjct: 195 FECFDSVTSILFLVSSSEFDQVLMEDRQT--NRLTESLNIFETIV 237
>pdb|1ZCA|A Chain A, Crystal Structure Of G Alpha 12 In Complex With Gdp, Mg2+
And Alf4-
pdb|1ZCA|B Chain B, Crystal Structure Of G Alpha 12 In Complex With Gdp, Mg2+
And Alf4-
Length = 359
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 56/312 (17%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIERRTLQKL---LLVGCSGSGTSTIFKQAKILYKAVPFSD 562
+ + A + S ++ R++ + ERR +++L LL+G SG ST KQ +I++
Sbjct: 7 AEDKAAVERSKMIDRNLREDGERRAVRRLVKILLLGAGESGKSTFLKQMRIIHGR----- 61
Query: 563 DEHENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIY 622
+ A LLE R+ + IL R + + + S + K
Sbjct: 62 --------EFDQKA------LLEFRDTIFDNILKGSRVLVDARDKLGIPWQHSENEKH-- 105
Query: 623 TIGPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLS 682
G L AF + L + PA + Y P + LW+D+ I+ +SRRSE ++
Sbjct: 106 --GMFLMAFEN-------KAGL-PVEPATFQLYVPALSALWRDSGIREAFSRRSEFQLGE 155
Query: 683 SVASYFLERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHD 742
SV YFL+ + I + +Y PS DIL A T G+ DF + VD Q
Sbjct: 156 SV-KYFLDNLDRIGQLNYFPSKQDILLARKATK--GIVEHDFVIKKIPF-KMVDVGGQR- 210
Query: 743 SLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRK 802
+ KW + F+ I ++F V+ S+YDQ ++ + N+++ S
Sbjct: 211 ---------------SQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRT--NRLVESMN 253
Query: 803 FFESIVTIQLLI 814
FE+IV +L
Sbjct: 254 IFETIVNNKLFF 265
>pdb|3V00|C Chain C, Studies Of A Constitutively Active G-Alpha Subunit Provide
Insights Into The Mechanism Of G Protein Activation.
pdb|3V00|B Chain B, Studies Of A Constitutively Active G-Alpha Subunit Provide
Insights Into The Mechanism Of G Protein Activation.
pdb|3V00|A Chain A, Studies Of A Constitutively Active G-Alpha Subunit Provide
Insights Into The Mechanism Of G Protein Activation
Length = 356
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 58/276 (21%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE-HENIKLKIQSNAYGYLGILLEGRERFE 591
KLLL+G SG STI KQ KI+++ P+S +E E I + + L I+
Sbjct: 37 KLLLLGAGESGKSTIVKQMKIIHQD-PYSLEECLEFIAIIYGNTLQSILAIV-------- 87
Query: 592 EEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAA 651
+ ++ S+ D + + + ++ E P
Sbjct: 88 --------RAMTTLNIQYGDSARQDDARKLMHMADTIE---------------EGTMP-- 122
Query: 652 TREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAE 711
+E S +++ LWKD+ IQA + R SE + L+ A Y+L + + Y P++ D+L +
Sbjct: 123 -KEMSDIIQRLWKDSGIQACFDRASEYQ-LNDSAGYYLSDLERLVTPGYVPTEQDVLRSR 180
Query: 712 GVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIG 771
+ G+ FSF L +++ V + E KW+ FE +
Sbjct: 181 --VKTTGIIETQFSFKD----------------LNFRMFDVGGQR-SERKKWIHCFEGVT 221
Query: 772 MVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S F SI
Sbjct: 222 AIIFCVALSDYDL--VLAEDEEMNRMHESMHLFNSI 255
>pdb|1FQJ|A Chain A, Crystal Structure Of The Heterotrimeric Complex Of The Rgs
Domain Of Rgs9, The Gamma Subunit Of Phosphodiesterase
And The GtI1 CHIMERA ALPHA SUBUNIT [(RGS9)-(Pdegamma)-
(GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)]
pdb|1FQJ|D Chain D, Crystal Structure Of The Heterotrimeric Complex Of The Rgs
Domain Of Rgs9, The Gamma Subunit Of Phosphodiesterase
And The GtI1 CHIMERA ALPHA SUBUNIT [(RGS9)-(Pdegamma)-
(GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)]
pdb|1FQK|A Chain A, Crystal Structure Of The Heterodimeric Complex Of The Rgs
Domain Of Rgs9, And The GtI1 CHIMERA ALPHA SUBUNIT
[(Rgs9)-(GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)]
pdb|1FQK|C Chain C, Crystal Structure Of The Heterodimeric Complex Of The Rgs
Domain Of Rgs9, And The GtI1 CHIMERA ALPHA SUBUNIT
[(Rgs9)-(GtI1ALPHA)-(Gdp)-(Alf4-)-(Mg2+)]
Length = 325
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++ ++ E I + + L I+
Sbjct: 6 KLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIV--------- 56
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ ++ S+ D + + + ++ E P
Sbjct: 57 -------RAMTTLNIQYGDSARQDDARKLMHMADTIE---------------EGTMP--- 91
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
+E S +++ LWKD+ IQA + R SE + L+ A Y+L + + Y P++ D+L +
Sbjct: 92 KEMSDIIQRLWKDSGIQACFDRASEYQ-LNDSAGYYLSDLERLVTPGYVPTEQDVLRSR- 149
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ FSF L +++ V + E KW+ FE +
Sbjct: 150 -VKTTGIIETQFSFKD----------------LNFRMFDVGGQR-SERKKWIHCFEGVTA 191
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V MN+M S K F+SI
Sbjct: 192 IIFCVALSDYDL--VLAEDEEMNRMHESMKLFDSI 224
>pdb|1CS4|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1U0H|C Chain C, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|C Chain C, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|C Chain C, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3G82|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|C Chain C, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 394
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 529 RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRE 588
R +LLL+G SG STI KQ +IL+ F+ + E +SN+ G
Sbjct: 38 RATHRLLLLGAGESGKSTIVKQMRILH-VNGFNGEGGEEDPQAARSNSDG---------- 86
Query: 589 RFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIF 648
E+ + K + + ++ S + P + D++L M + + F
Sbjct: 87 --EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFD--F 142
Query: 649 PAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDIL 708
P E+ + LW+D ++A Y R +E +++ A YFL+++ I + DY PSD D+L
Sbjct: 143 PP---EFYEHAKALWEDEGVRACYERSNEYQLID-CAQYFLDKIDVIKQDDYVPSDQDLL 198
Query: 709 YAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFE 768
+TS G+ F + + D Q D E KW++ F
Sbjct: 199 RCRVLTS--GIFETKFQVDK-VNFHMFDVGGQRD----------------ERRKWIQCFN 239
Query: 769 DIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
D+ +IF VA S Y+ + N + N++ + F+SI
Sbjct: 240 DVTAIIFVVASSSYNMVIREDNQT--NRLQEALNLFKSI 276
>pdb|1AZS|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
pdb|1AZT|A Chain A, Gs-Alpha Complexed With Gtp-Gamma-S
pdb|1AZT|B Chain B, Gs-Alpha Complexed With Gtp-Gamma-S
pdb|3C14|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
Length = 402
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 529 RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRE 588
R +LLL+G SG STI KQ +IL+ F+ + E +SN+ G
Sbjct: 38 RATHRLLLLGAGESGKSTIVKQMRILH-VNGFNGEGGEEDPQAARSNSDG---------- 86
Query: 589 RFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIF 648
E+ + K + + ++ S + P + D++L M + + F
Sbjct: 87 --EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFD--F 142
Query: 649 PAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDIL 708
P E+ + LW+D ++A Y R +E +++ A YFL+++ I + DY PSD D+L
Sbjct: 143 PP---EFYEHAKALWEDEGVRACYERSNEYQLID-CAQYFLDKIDVIKQDDYVPSDQDLL 198
Query: 709 YAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFE 768
+TS G+ F + + D Q D E KW++ F
Sbjct: 199 RCRVLTS--GIFETKFQVDK-VNFHMFDVGGQRD----------------ERRKWIQCFN 239
Query: 769 DIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
D+ +IF VA S Y+ + N + N++ + F+SI
Sbjct: 240 DVTAIIFVVASSSYNMVIREDNQT--NRLQEALNLFKSI 276
>pdb|1CJK|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1TL7|C Chain C, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
Length = 402
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 529 RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRE 588
R +LLL+G SG STI KQ +IL+ F+ E +SN+ G
Sbjct: 38 RATHRLLLLGAGESGKSTIVKQMRILH-VNGFNGGEGGEEDPNAKSNSDG---------- 86
Query: 589 RFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIF 648
E+ + K + + ++ S + P + D++L M + + F
Sbjct: 87 --EKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPDFD--F 142
Query: 649 PAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDIL 708
P E++ + LW+D ++A Y R +E +++ A YFL+++ I + DY PSD D+L
Sbjct: 143 PPEFYEHA---KALWEDEGVRACYERSNEYQLID-CAQYFLDKIDVIKQDDYVPSDQDLL 198
Query: 709 YAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFE 768
+TS G+ F + + D Q D E KW++ F
Sbjct: 199 RCRVLTS--GIFETKFQVDK-VNFHMFDVGGQRD----------------ERRKWIQCFN 239
Query: 769 DIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
D+ +IF VA S Y+ + N + N++ + F+SI
Sbjct: 240 DVTAIIFVVASSSYNMVIREDNQT--NRLQEALNLFKSI 276
>pdb|3SN6|A Chain A, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs
Protein Complex
Length = 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 56/280 (20%)
Query: 529 RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLK-IQSNAYGYLGILLEGR 587
R +LLL+G SG STI KQ +IL+ F+ D + K++ I++N + ++
Sbjct: 38 RATHRLLLLGAGESGKSTIVKQMRILH-VNGFNGDSEKATKVQDIKNNLKEAIETIVAA- 95
Query: 588 ERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAI 647
S+ PV ++ P + D++L M + +
Sbjct: 96 ---------------MSNLVPPVELAN-----------PENQFRVDYILSVMNVPDFD-- 127
Query: 648 FPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDI 707
FP E++ + LW+D ++A Y R +E +++ A YFL+++ I + DY PSD D+
Sbjct: 128 FPPEFYEHA---KALWEDEGVRACYERSNEYQLIDC-AQYFLDKIDVIKQDDYVPSDQDL 183
Query: 708 LYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMF 767
L +TS G+ F + + D Q D E KW++ F
Sbjct: 184 LRCRVLTS--GIFETKFQVDK-VNFHMFDVGGQRD----------------ERRKWIQCF 224
Query: 768 EDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
D+ +IF VA S Y+ + N + N++ + F+SI
Sbjct: 225 NDVTAIIFVVASSSYNMVIREDNQT--NRLQEALNLFKSI 262
>pdb|1CUL|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
Length = 380
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 56/280 (20%)
Query: 529 RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLK-IQSNAYGYLGILLEGR 587
R +LLL+G SG STI KQ +IL+ F+ D + K++ I++N + ++
Sbjct: 38 RATHRLLLLGAGESGKSTIVKQMRILH-VNGFNGDGEKATKVQDIKNNLKEAIETIVAA- 95
Query: 588 ERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAI 647
S+ PV ++ P + D++L M + +
Sbjct: 96 ---------------MSNLVPPVELAN-----------PENQFRVDYILSVMNVPDFD-- 127
Query: 648 FPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDI 707
FP E++ + LW+D ++A Y R +E +++ A YFL+++ I + DY PSD D+
Sbjct: 128 FPPEFYEHA---KALWEDEGVRACYERSNEYQLIDC-AQYFLDKIDVIKQDDYVPSDQDL 183
Query: 708 LYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMF 767
L +TS G+ F + + D Q D E KW++ F
Sbjct: 184 LRCRVLTS--GIFETKFQVDK-VNFHMFDVGGQRD----------------ERRKWIQCF 224
Query: 768 EDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
D+ +IF VA S Y+ + N + N++ + F+SI
Sbjct: 225 NDVTAIIFVVASSSYNMVIREDNQT--NRLQEALNLFKSI 262
>pdb|1GOT|A Chain A, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And
The Gt-Beta-Gamma Subunits
Length = 350
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
+E S +++ LWKD+ IQA + R SE + L+ A Y+L + + Y P++ D+L +
Sbjct: 117 KEXSDIIQRLWKDSGIQACFDRASEYQ-LNDSAGYYLSDLERLVTPGYVPTEQDVLRSRV 175
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
T+ G+ FSF L ++ V + E KW+ FE +
Sbjct: 176 KTT--GIIETQFSFKD----------------LNFRXFDVGGQR-SERKKWIHCFEGVTA 216
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IFCVALSDYD V N+ S K F+SI
Sbjct: 217 IIFCVALSDYDL--VLAEDEEXNRXHESXKLFDSI 249
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYK 556
KLLL+G SG STI KQ KI+++
Sbjct: 31 KLLLLGAGESGKSTIVKQXKIIHQ 54
>pdb|2BCJ|Q Chain Q, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|2RGN|A Chain A, Crystal Structure Of P63rhogef Complex With Galpha-Q And
Rhoa
pdb|2RGN|D Chain D, Crystal Structure Of P63rhogef Complex With Galpha-Q And
Rhoa
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIER-RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + ER R KLLL+G SG ST KQ +I++ + +SD++
Sbjct: 7 AEDKAAVERSKMIDRNLREDGERSRRELKLLLLGTGESGKSTFIKQMRIIHGS-GYSDED 65
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ N + + ++ + + E K +
Sbjct: 66 KRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQ-------------------- 105
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
L++ + ++E + A Y ++ LW D IQ Y RR E ++ S
Sbjct: 106 ----------LVREV---DVEKV-SAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDST 151
Query: 685 ASYF--LERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFP-RSASDDSVDTADQH 741
Y L+RV D S Y P+ D+L T+ +++ F +S VD Q
Sbjct: 152 KYYLNDLDRVADPS---YLPTQQDVLRVRVPTT----GIIEYPFDLQSVIFRMVDVGGQR 204
Query: 742 DSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSR 801
E KW+ FE++ ++F VALS+YDQ V+ + N+M S+
Sbjct: 205 ----------------SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE--NRMEESK 246
Query: 802 KFFESIVT 809
F +I+T
Sbjct: 247 ALFRTIIT 254
>pdb|3AH8|A Chain A, Structure Of Heterotrimeric G Protein Galpha-Q Beta Gamma
In Complex With An Inhibitor Ym-254890
Length = 355
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 506 SSNPGAEQGSGLMSRSVPDYIER-RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDE 564
+ + A + S ++ R++ + ER R KLLL+G SG ST KQ +I++ + +SD++
Sbjct: 9 AEDKAAVERSKMIDRNLREDGERSRRELKLLLLGTGESGKSTFIKQMRIIHGS-GYSDED 67
Query: 565 HENIKLKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTI 624
+ N + + ++ + + E K +
Sbjct: 68 KRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQ-------------------- 107
Query: 625 GPRLKAFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSV 684
L++ + ++E + A Y ++ LW D IQ Y RR E ++ S
Sbjct: 108 ----------LVREV---DVEKV-SAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDST 153
Query: 685 ASYF--LERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFP-RSASDDSVDTADQH 741
Y L+RV D S Y P+ D+L T+ +++ F +S VD Q
Sbjct: 154 KYYLNDLDRVADPS---YLPTQQDVLRVRVPTT----GIIEYPFDLQSVIFRMVDVGGQR 206
Query: 742 DSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSR 801
E KW+ FE++ ++F VALS+YDQ V+ + N+M S+
Sbjct: 207 ----------------SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE--NRMEESK 248
Query: 802 KFFESIVT 809
F +I+T
Sbjct: 249 ALFRTIIT 256
>pdb|4GNK|A Chain A, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
pdb|4GNK|C Chain C, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 72/303 (23%)
Query: 519 SRSVPDYIER---------RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIK 569
+R + D IER R KLLL+G SG ST KQ +I++ + +SD++
Sbjct: 12 ARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGS-GYSDEDKRGFT 70
Query: 570 LKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLK 629
+ N + + ++ + + E K +
Sbjct: 71 KLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQ------------------------- 105
Query: 630 AFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYF- 688
L++ + ++E + A Y ++ LW D IQ Y RR E ++ S Y
Sbjct: 106 -----LVREV---DVEKV-SAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLN 156
Query: 689 -LERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFP-RSASDDSVDTADQHDSLLR 746
L+RV D S Y P+ D+L T+ +++ F +S VD Q
Sbjct: 157 DLDRVADPS---YLPTQQDVLRVRVPTT----GIIEYPFDLQSVIFRMVDVGGQR----- 204
Query: 747 YQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFES 806
E KW+ FE++ ++F VALS+YDQ V+ + N+M S+ F +
Sbjct: 205 -----------SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE--NRMEESKALFRT 251
Query: 807 IVT 809
I+T
Sbjct: 252 IIT 254
>pdb|3OHM|A Chain A, Crystal Structure Of Activated G Alpha Q Bound To Its
Effector Phospholipase C Beta 3
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 64/285 (22%)
Query: 528 RRTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGR 587
RR L KLLL+G SG ST KQ +I++ + +SD++ + N + + ++
Sbjct: 5 RREL-KLLLLGTGESGKSTFIKQMRIIHGS-GYSDEDKRGFTKLVYQNIFTAMQAMIRAM 62
Query: 588 ERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAI 647
+ + E K + L++ + ++E +
Sbjct: 63 DTLKIPYKYEHNKAHAQ------------------------------LVREV---DVEKV 89
Query: 648 FPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYF--LERVVDISRTDYEPSDL 705
A Y ++ LW D IQ Y RR E ++ S Y L+RV D S Y P+
Sbjct: 90 -SAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPS---YLPTQQ 145
Query: 706 DILYAEGVTSSNGLACVDFSFP-RSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWL 764
D+L T+ +++ F +S VD Q E KW+
Sbjct: 146 DVLRVRVPTT----GIIEYPFDLQSVIFRMVDVGGQR----------------SERRKWI 185
Query: 765 EMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVT 809
FE++ ++F VALS+YDQ V+ + N+M S+ F +I+T
Sbjct: 186 HCFENVTSIMFLVALSEYDQVLVESDNE--NRMEESKALFRTIIT 228
>pdb|1TND|A Chain A, The 2.2 Angstroms Crystal Structure Of Transducin-Alpha
Complexed With Gtp Gamma S
pdb|1TND|B Chain B, The 2.2 Angstroms Crystal Structure Of Transducin-Alpha
Complexed With Gtp Gamma S
pdb|1TND|C Chain C, The 2.2 Angstroms Crystal Structure Of Transducin-Alpha
Complexed With Gtp Gamma S
pdb|1TAD|A Chain A, Gtpase Mechanism Of Gproteins From The 1.7-Angstrom
Crystal Structure Of Transducin Alpha-Gdp-Alf4-
pdb|1TAD|B Chain B, Gtpase Mechanism Of Gproteins From The 1.7-Angstrom
Crystal Structure Of Transducin Alpha-Gdp-Alf4-
pdb|1TAD|C Chain C, Gtpase Mechanism Of Gproteins From The 1.7-Angstrom
Crystal Structure Of Transducin Alpha-Gdp-Alf4-
pdb|1TAG|A Chain A, Structural Determinants For Activation Of The
Alpha-Subunit Of A Heterotrimeric G Protein
Length = 324
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 56/275 (20%)
Query: 533 KLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEE 592
KLLL+G SG STI KQ KI+++ ++ E I + + L I+
Sbjct: 5 KLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIV--------- 55
Query: 593 EILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAAT 652
+ ++ S+ D + + + ++ E P
Sbjct: 56 -------RAMTTLNIQYGDSARQDDARKLMHMADTIE---------------EGTMP--- 90
Query: 653 REYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEG 712
+E S +++ LWKD+ IQA + R SE + L+ A Y+L + + Y P++ D+L +
Sbjct: 91 KEMSDIIQRLWKDSGIQACFDRASEYQ-LNDSAGYYLSDLERLVTPGYVPTEQDVLRSR- 148
Query: 713 VTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGM 772
+ G+ FSF L +++ V + E KW+ FE +
Sbjct: 149 -VKTTGIIETQFSFKD----------------LNFRMFDVGGQR-SERKKWIHCFEGVTC 190
Query: 773 VIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
+IF ALS YD V+ + +N+M S F SI
Sbjct: 191 IIFIAALSAYDMVLVEDDE--VNRMHESLHLFNSI 223
>pdb|4FID|A Chain A, Crystal Structure Of A Heterotrimeric G-Protein Subunit
From Entamoeba Histolytica, Ehg-Alpha-1
pdb|4FID|B Chain B, Crystal Structure Of A Heterotrimeric G-Protein Subunit
From Entamoeba Histolytica, Ehg-Alpha-1
Length = 340
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 113/293 (38%), Gaps = 66/293 (22%)
Query: 534 LLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIKLKIQSNAYGYLGILLEGRERFEEE 593
+ L+G SG STI KQ KIL+ F + E K I SN L+E +
Sbjct: 8 VXLLGSGESGKSTIAKQLKILFGG-GFPEQERATHKSSICSNVVTCXRTLIE-----QSA 61
Query: 594 ILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLKAFSDWLLKTMVSGNLEAIFPAATR 653
IL K Q K T P FS L+ G++EA
Sbjct: 62 ILNHPXKYQPK-------------SKEFTTEDPVTLPFSPELV-----GDVEA------- 96
Query: 654 EYSPLVEELWKDAAIQATYSRRSELEMLSSVASYFLERVVDISRTDYEPSDLDILYAEGV 713
LW D IQATY ++ + L A Y E V I+ DY P++ D+++
Sbjct: 97 --------LWADEGIQATYEESAKFQ-LPDCAKYLFENVKRIAXEDYVPTEEDLIHNR-- 145
Query: 714 TSSNGLACVDFSFPRSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMV 773
T + G+ DF + + LI V + E W+ F D+
Sbjct: 146 TKTTGIHEYDFVVKD----------------IPFHLIDVGGQ-RSERKXWVSFFSDVDCA 188
Query: 774 IFCVALSDYD-QFSVDGNGSLMN------KMMLSRKFFESIVTIQLLIRWNFF 819
IF +L++YD + DGN S + K + + +F + V + L + + F
Sbjct: 189 IFVTSLAEYDXKLYEDGNTSRLTESIAVFKDIXTNEFLKGAVKLIFLNKXDLF 241
>pdb|4EKC|A Chain A, Structure Of Human Regulator Of G Protein Signaling 2
(rgs2) In Complex With Murine Galpha-q(r183c)
pdb|4EKC|C Chain C, Structure Of Human Regulator Of G Protein Signaling 2
(rgs2) In Complex With Murine Galpha-q(r183c)
pdb|4EKD|A Chain A, Structure Of Human Regulator Of G Protein Signaling 2
(rgs2) In Complex With Murine Galpha-q(r183c)
Length = 347
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 120/302 (39%), Gaps = 70/302 (23%)
Query: 519 SRSVPDYIER---------RTLQKLLLVGCSGSGTSTIFKQAKILYKAVPFSDDEHENIK 569
+R + D IER R KLLL+G SG ST KQ +I++ + +SD++
Sbjct: 6 ARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGS-GYSDEDKRGFT 64
Query: 570 LKIQSNAYGYLGILLEGRERFEEEILGEKRKKQSSDETNPVGSSDSTDGKTIYTIGPRLK 629
+ N + + ++ + + E K +
Sbjct: 65 KLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQ------------------------- 99
Query: 630 AFSDWLLKTMVSGNLEAIFPAATREYSPLVEELWKDAAIQATYSRRSELEMLSSVASYF- 688
L++ + ++E + +Y+ ++ LW D IQ Y RR E ++ S Y
Sbjct: 100 -----LVREV---DVEKVSAFDVPDYAA-IKSLWNDPGIQECYDRRREYQLSDSTKYYLN 150
Query: 689 -LERVVDISRTDYEPSDLDILYAEGVTSSNGLACVDFSFPRSASDDSVDTADQHDSLLRY 747
L+RV D S Y P+ D+L + G+ F +S VD Q
Sbjct: 151 DLDRVADPS---YLPTQQDVLRV--CVPTTGIIEYPFDL-QSVIFRMVDVGGQR------ 198
Query: 748 QLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESI 807
E KW+ FE++ ++F VALS+YDQ V+ + N+M S+ F +I
Sbjct: 199 ----------SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNE--NRMEESKALFRTI 246
Query: 808 VT 809
+T
Sbjct: 247 IT 248
>pdb|2HPW|A Chain A, Green Fluorescent Protein From Clytia Gregaria
Length = 233
Score = 30.0 bits (66), Expect = 5.8, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 180 QPDWESNESVLSMD----YPSSRVSSLKTGDLSNRINHDDDGFESNGD 223
QPD S + ++S D Y + + G L NR+ GF+SNG+
Sbjct: 87 QPDGYSQDRIISFDNDGQYDVKAKVTYENGTLYNRVTVKGTGFKSNGN 134
>pdb|1WRD|A Chain A, Crystal Structure Of Tom1 Gat Domain In Complex With
Ubiquitin
Length = 103
Score = 29.6 bits (65), Expect = 7.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 675 RSELEMLSSVASYFLERVVDISRTDYEPSDLDIL 708
RSELEM+S E + ++ T EP+DL++L
Sbjct: 12 RSELEMVSGNVRVMSEMLTELVPTQAEPADLELL 45
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,631,112
Number of Sequences: 62578
Number of extensions: 968300
Number of successful extensions: 2414
Number of sequences better than 100.0: 63
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2233
Number of HSP's gapped (non-prelim): 103
length of query: 819
length of database: 14,973,337
effective HSP length: 107
effective length of query: 712
effective length of database: 8,277,491
effective search space: 5893573592
effective search space used: 5893573592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)