Your job contains 1 sequence.
>003445
MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRL
SVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNS
TAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQ
SKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERN
SKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEK
RGSSPNYDGPTSSISSGTVSTVSMPPFNAFKQRGYSSSAEKETASVSDEDATADVMEQHS
QFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVTLDIC
SCLLPLLTGLLESDMDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIERC
NRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLALQDVS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003445
(819 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 1787 3.2e-184 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 1709 5.9e-176 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 1247 7.0e-169 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 958 5.5e-113 2
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 939 1.4e-112 2
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 938 1.8e-112 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 935 7.9e-112 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 934 2.1e-111 2
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 935 3.4e-109 2
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 920 5.6e-109 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 896 4.5e-105 2
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 942 1.1e-94 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 930 2.1e-93 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 775 5.5e-77 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 693 2.7e-68 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 644 4.2e-63 1
FB|FBgn0040207 - symbol:kat80 "katanin 80" species:7227 "... 572 1.9e-61 2
UNIPROTKB|F1RF38 - symbol:KATNB1 "Uncharacterized protein... 470 5.5e-44 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 407 3.3e-34 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 282 2.7e-31 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 330 1.7e-30 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 344 2.6e-30 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 343 3.3e-30 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 354 5.8e-30 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 352 1.2e-29 1
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 352 1.3e-29 1
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 352 1.3e-29 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 347 2.3e-29 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 348 4.2e-29 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 332 5.0e-29 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 332 5.0e-29 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 331 6.5e-29 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 330 8.3e-29 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 284 9.6e-29 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 329 1.1e-28 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 328 1.4e-28 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 282 1.8e-28 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 282 1.8e-28 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 282 1.8e-28 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 282 1.8e-28 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 282 1.8e-28 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 282 1.8e-28 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 282 1.8e-28 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 282 1.8e-28 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 326 2.2e-28 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 325 2.9e-28 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 354 3.0e-28 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 280 5.1e-28 2
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 280 5.1e-28 2
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 338 6.3e-28 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 321 7.7e-28 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 321 7.7e-28 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 320 9.9e-28 1
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 335 1.4e-27 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 331 1.9e-27 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 330 2.3e-27 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 330 2.5e-27 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 330 2.5e-27 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 316 2.7e-27 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 330 2.8e-27 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 314 4.4e-27 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 329 8.0e-27 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 308 1.9e-26 1
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 325 2.2e-26 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 306 3.2e-26 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 323 3.9e-26 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 320 4.3e-26 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 304 5.2e-26 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 327 6.2e-26 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 321 7.8e-26 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 321 7.9e-26 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 320 8.7e-26 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 300 1.4e-25 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 300 1.4e-25 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 300 1.4e-25 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 300 1.4e-25 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 300 1.4e-25 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 300 1.4e-25 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 300 1.4e-25 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 321 1.6e-25 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 321 1.6e-25 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 319 1.8e-25 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 322 2.2e-25 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 298 2.3e-25 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 298 2.3e-25 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 321 2.5e-25 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 321 2.5e-25 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 297 2.9e-25 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 320 3.2e-25 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 317 3.6e-25 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 321 3.9e-25 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 314 4.2e-25 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 322 5.4e-25 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 313 5.4e-25 1
TAIR|locus:2012971 - symbol:AT1G71840 "AT1G71840" species... 298 6.9e-25 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 293 7.9e-25 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 314 9.3e-25 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 292 1.0e-24 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 291 1.3e-24 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 305 1.5e-24 1
WARNING: Descriptions of 1819 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 1787 (634.1 bits), Expect = 3.2e-184, P = 3.2e-184
Identities = 384/616 (62%), Positives = 437/616 (70%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
MTTKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSL GH+S
Sbjct: 1 MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
GIDSV+FD+SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRWVVSGGEDN VK+WDLTAGKLL +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
FK HEGQIQ +DFHPHEFLLATGSADRTVKFWDLETFELIGS GPET+GVRCL+FNPDG+
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
T+LCGL ESLK+FSWEPIRCHD VDVGWSRLSD+NVHEGKLLGCSYNQSCVGVWVVD+SR
Sbjct: 241 TVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSR 300
Query: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRL 360
EP G + NG E +S + + VLN+N++K LGKLSVSQN DPL+KETKSLGRL
Sbjct: 301 TEPCMAGDTAQSNGHPEKRSCSGRDPVVLNDNNSKTVLGKLSVSQNVDPLLKETKSLGRL 360
Query: 361 SVSQNSDPLLKETKTLGRLSVSQNSEPA-KESKVLS----STGSVPGTPQRVNLNMGSKT 415
SVSQNSDP KETK++GR S SQNSE + KESK L S S R + GS
Sbjct: 361 SVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGRLSVSQNSDVSKESRTFSSTGSLP 420
Query: 416 SVVN--STAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGR 473
+ S+ VSK TS + SN ++ P+ N +A + I + R
Sbjct: 421 GTPHRVSSTNVSKATSGVSTAVSNAATSRRN--FTKANPKANP-VNKAADFAPVI--VPR 475
Query: 474 TMPFSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQG 533
P Q AT+SR E+D ++ + A S + RN S+
Sbjct: 476 ADPRIEQ--ATESRA------ELD--IIARTMPYSLQAADSRRSPSSRNNPDLPDASVLE 525
Query: 534 VSVT---ERNSKEDIFTV-SGKSGTMSMSESPASYEDERYDSLGHKSNRDGYAMESQKRG 589
+S + E N+ D T+ GK G +E S D RY G ++R +
Sbjct: 526 MSESQPVEPNNIPDGGTLPGGKVGMRGATER--SINDFRYKRYGRSNSRSRMGSPPRNHD 583
Query: 590 RMHSLVINWEKRGSSP 605
+ LV + R SP
Sbjct: 584 ENYDLVSHRSNRDPSP 599
Score = 1190 (424.0 bits), Expect = 5.8e-121, P = 5.8e-121
Identities = 263/505 (52%), Positives = 335/505 (66%)
Query: 319 KSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGR 378
K S S N+ L + + SLG+LSVSQNSDP KETKS+GR S SQNS+ +KE+K LGR
Sbjct: 340 KLSVSQNVDPLLKETK--SLGRLSVSQNSDPSTKETKSIGRSSTSQNSESSMKESKPLGR 397
Query: 379 LSVSQNSEPAKESKVLSSTGSVPGTPQRVN-LNMGSKTSVVN---STAVVSKRTSTRANT 434
LSVSQNS+ +KES+ SSTGS+PGTP RV+ N+ TS V+ S A S+R T+AN
Sbjct: 398 LSVSQNSDVSKESRTFSSTGSLPGTPHRVSSTNVSKATSGVSTAVSNAATSRRNFTKANP 457
Query: 435 ASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATDSRKFQNSGD 494
+N P+ +D PVIVPR + R EQA ESR ++D+I RTMP+SLQ A DSR+ +S +
Sbjct: 458 KAN-PVNKAADFAPVIVPRADPRIEQATESRAELDIIARTMPYSLQ--AADSRRSPSSRN 514
Query: 495 EVDQPAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGT 554
D P SVL E + S+ E +++ D T K ++G TER+ + + G+S +
Sbjct: 515 NPDLPDASVL-EMSESQPVEPNNIPDGGTLPGGKVGMRGA--TERSINDFRYKRYGRSNS 571
Query: 555 MSMSESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSSPNYDGPXXXX 614
S SP DE YD + H+SNRD ESQK GR SLVIN E+RG N++GP
Sbjct: 572 RSRMGSPPRNHDENYDLVSHRSNRDPSPTESQKGGRFQSLVINRERRGRFSNFEGPVSNF 631
Query: 615 XXXXXXXXXMPPFNAFKQRGYSSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQ 674
+ P N FKQRG E+ S S+E+ D+M +H+QFVSSMQSRLAKLQ
Sbjct: 632 SSGNMPAPNIRPSNMFKQRGNHMPVEQGIDSPSEENIVEDIMGKHNQFVSSMQSRLAKLQ 691
Query: 675 AVYRYWERNDVKGAISAMQKMADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESD 734
V RYWERNDVK +I +++KMAD+ V ADV+ I+ E+ EI+TLD C+ S
Sbjct: 692 VVRRYWERNDVKNSIGSIEKMADNAVTADVLGIITERNEILTLDNCTSLLPLLTALLGSG 751
Query: 735 MDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCL 794
MD+HLS+SLD+LLKLVR +GS IYS++SA SVGVDIEAEQRIER +RCF+ELEKVK CL
Sbjct: 752 MDQHLSVSLDLLLKLVRLYGSPIYSSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACL 811
Query: 795 PTLMRRGGSVAKSAQELNLALQDVS 819
P+L RRGG VAKS ELNLA Q+VS
Sbjct: 812 PSLARRGGLVAKSVLELNLAFQEVS 836
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 1709 (606.7 bits), Expect = 5.9e-176, P = 5.9e-176
Identities = 334/491 (68%), Positives = 393/491 (80%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M TKRAYKLQEFVAHS+ VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSL GH+S
Sbjct: 1 MNTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
GIDSV+FD+SE LVAAGAASGTIKLWDLEEAK+VRTLTGHRSNC+SV+FHPFGEFFASGS
Sbjct: 61 GIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 120
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
LDTNLKIWDIRKKGCIHTYKGHTRGVN +RFTPDGRW+VSGGEDN VK+WDLTAGKLLH+
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE 180
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
FK HEG+IQ +DFHPHEFLLATGSAD+TVKFWDLETFELIGS G ET+GVRCLTFNPDG+
Sbjct: 181 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGK 240
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
++LCGL ESLK+FSWEPIRCHD VDVGWS LSD+NVHEGKLLGCSYNQ+CVGVWVVD+SR
Sbjct: 241 SVLCGLQESLKIFSWEPIRCHDGVDVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVDLSR 300
Query: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRL 360
EP + G T+ N E S + + + LN+NS+K LGKL SQ DPL+KETKSLG+L
Sbjct: 301 TEPMS-GGATQSNSHPEKTSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKL 359
Query: 361 SVSQNSDPLLKETKTLGRLSVSQNSEP-AKESKVLSSTGSVPGTPQ-RVNLNMGSKTSVV 418
SVSQNSDPL K+TK+ GR SVSQ+S+P KE K L + + + + + S SV
Sbjct: 360 SVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVS 419
Query: 419 NSTAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDID--VIGRTMP 476
+S V+ ++ ++ + + + N + + N + V +++D ++ RT P
Sbjct: 420 DSPHRVTLTSAPKSASGISTVVPNAAASKRNF-GKANPKANPPVVNKEDYFPVIVPRTEP 478
Query: 477 FSLQSKATDSR 487
Q A++SR
Sbjct: 479 IIEQ--ASESR 487
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 250/487 (51%), Positives = 320/487 (65%)
Query: 337 SLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSS 396
SLGKLSVSQNSDPL K+TKS GR SVSQ+SDPL+KE K LGR S + +S+ KES+ LSS
Sbjct: 355 SLGKLSVSQNSDPLPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSS 414
Query: 397 TGSVPGTPQRVNLNMGSKT----SVVNSTAVVSKRTSTRANTASNVPILNKSDIVPVIVP 452
TGSV +P RV L K+ S V A SKR +AN +N P++NK D PVIVP
Sbjct: 415 TGSVSDSPHRVTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVP 474
Query: 453 RTNTRFEQAVESRKDIDVIGRTMPFSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKA 512
RT EQA ESR ++D+IGRTMP+SLQSKA DSR+ +S +E D P S+L E + S+
Sbjct: 475 RTEPIIEQASESRAELDIIGRTMPYSLQSKAADSRRLSSSRNEPDLPTSSLL-ERSQSQP 533
Query: 513 TEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSL 572
E ++ D NT+ + +G ER +KE V G+ + S+ SP DE D +
Sbjct: 534 IEPITLQDGNTYPSDEGG--SWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDENSDLI 591
Query: 573 GHKSNRDGYAMESQKRGRMHSLVINWEKRGSSPNYDGPXXXXXXXXXXXXXMPPFNAFKQ 632
+ +NRD ES+K GR+HSLV+N E+RG N++GP P N KQ
Sbjct: 592 SYNANRDSSPTESRKGGRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSRPSNMLKQ 651
Query: 633 RGYSSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAM 692
RG ++ S S+ED AD+M QH QFVSSM SRLAKLQ V RYWERND+K +IS++
Sbjct: 652 RGNHVPVDQGITSASEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSI 711
Query: 693 QKMADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRT 752
+KMAD+ V+ADV+ IV E+ EI+TLD C+ S+MD HLS+ LD+LLKLVR
Sbjct: 712 EKMADNAVIADVLLIVNERPEILTLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRM 771
Query: 753 FGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELN 812
+GS IYS++SA +SVGVDIEAEQR+ER + CF+E EK+K CLP+L RRG VAK+ ELN
Sbjct: 772 YGSQIYSSLSAPSSVGVDIEAEQRMERYSCCFVEFEKIKACLPSLARRGNLVAKTLHELN 831
Query: 813 LALQDVS 819
L Q+VS
Sbjct: 832 LTFQEVS 838
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 1247 (444.0 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 244/434 (56%), Positives = 307/434 (70%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
KR YKLQEFVAHS VNCL IG+K+SR+L+TGG+D+KVNLW+IGK + +SL GHTS +D
Sbjct: 3 KRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVD 62
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
SV+F+S EVLV AGA+SG IKLWDLEE+K+VR TGHRSNC +V+FHPFGEF ASGS DT
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
NL++WD RKKGCI TYKGHTRG++ I F+PDGRWVVSGG DN VK+WDLTAGKLLH+FKC
Sbjct: 123 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 182
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
HEG I+ +DFHP EFLLATGSADRTVKFWDLETFELIG+ PE +GVR + F+PDG+TL
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242
Query: 244 CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEP 303
CGL + LKV+SWEP+ C D VD+GWS L D ++EGK +GCSY ++ VG+WV DIS +EP
Sbjct: 243 CGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSDISELEP 302
Query: 304 YTIGSVTRVNGLSESKSSAS-GNLSVLNENSAKASLGKLSVSQNSDPLVKETKSL----- 357
Y G+V SE K+ SVLN+ S + G S + D +E K++
Sbjct: 303 Y--GAV------SEDKNECMVKRFSVLNDQSERMGSGPRG-SVSPDYETREIKNIYVDST 353
Query: 358 -GRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTS 416
G L+V+QN L K T L V+ + + G + R + + G ++S
Sbjct: 354 GGNLNVAQNPGSL-KATLPLESGKVATMVSEKQNAAYFGPAGDKYSSTSR-DSDSGEESS 411
Query: 417 VVNSTAVVSKRTST 430
++ RT +
Sbjct: 412 YSERESIPFSRTKS 425
Score = 417 (151.9 bits), Expect = 7.0e-169, Sum P(2) = 7.0e-169
Identities = 86/182 (47%), Positives = 123/182 (67%)
Query: 640 EKETASVSDEDATADVMEQ----HSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKM 695
+KE ++SD + +D+ E H++F+S++QSRL KLQ V +WER+DVKGAI A++K+
Sbjct: 839 QKEEPNISDREDDSDITENLMLTHNEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKL 898
Query: 696 ADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGS 755
D +V ADV+SI+ EKIEI+TLD+ S S +R +++SLD+LLKLV FG+
Sbjct: 899 TDQSVQADVISILTEKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGT 958
Query: 756 MIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
+I S +SA VGVD+ A +R+E C C L K++ LP L RRGG + + AQELNL L
Sbjct: 959 VIRSTVSAPRIVGVDLHANERLEICQICSAGLHKIQRILPVLARRGGLITRKAQELNLVL 1018
Query: 816 QD 817
Q+
Sbjct: 1019 QE 1020
Score = 45 (20.9 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 21/94 (22%), Positives = 34/94 (36%)
Query: 509 GSKATEVSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDER 568
GS + + + +N + G V+ + K + SGK TM + A+Y
Sbjct: 334 GSVSPDYETREIKNIYVDSTGGNLNVAQNPGSLKATLPLESGKVATMVSEKQNAAYFGPA 393
Query: 569 YDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRG 602
D S RD + E S+ + K G
Sbjct: 394 GDKYSSTS-RDSDSGEESSYSERESIPFSRTKSG 426
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 958 (342.3 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 184/408 (45%), Positives = 267/408 (65%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAHSS V+ L +G+ + R+L TGG+D +VN+W++ KPN ++SL+GHT+
Sbjct: 5 VVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
I+S+ + E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+G F ASGS
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
LDT++K+WD+R+KGCI YK HT+ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP E+LLA+GS+DRT++FWDLE F ++ E + VRC+ FNPDG
Sbjct: 185 FTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL+V +L+G S+ QS V +VVD+SR
Sbjct: 245 CLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSR 304
Query: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRL 360
+ GSV +GL + + +S + S + S S + VK + R
Sbjct: 305 VTKS--GSVP--HGLLRNNELLAQPTPT--GSSLRRSYDRPSTSCSKPQRVKHSSESERR 358
Query: 361 SVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 408
S S D KE+K + QN E KE + ++ TP +N
Sbjct: 359 SPSSEEDRDEKESK-----AEIQNPEDYKE--IFQPRNAISRTPPHIN 399
Score = 177 (67.4 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 644 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLAD 703
A ++DE+ + + + H + SR L V W +D+K ++ A D +V+ D
Sbjct: 482 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVD 541
Query: 704 VMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISA 763
+++IV + + LD+C+ +S + ++ L +++ F +I ++A
Sbjct: 542 LLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAA 601
Query: 764 STSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 602 PPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 653
Score = 48 (22.0 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 515 VSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGH 574
V SV N ++ G + + ++KE++ +SG++ + + A+ + R LGH
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-KILR-TLLGH 104
Query: 575 KSN 577
K+N
Sbjct: 105 KAN 107
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 939 (335.6 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 205/508 (40%), Positives = 302/508 (59%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP+E+LLA+GS+DRT++FWDLE F+++ E VR + FNPDG
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL + +L+G +++QS V +VVD++R
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTR 304
Query: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKL----SVSQNSDPLVKETKS 356
VTR +++ A+ L+ N SL ++ S + + VK
Sbjct: 305 --------VTRTGTVTQDPVQANQPLTQQTPNPG-VSLRRIYERPSTTCSKPQRVKHNSE 355
Query: 357 LGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTS 416
R S S D +E+ R + QN+E E + S+ TP R + +
Sbjct: 356 SERRSPSSEDDRDERES----RAEI-QNAEDYNE--IFQPKNSISRTPPRRSEPFPAPPE 408
Query: 417 VVNSTAV-VSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIGRTM 475
+T VSK + +P+ N VP P T A + DI R
Sbjct: 409 DDAATVKEVSKPSPAMDVQLPQLPVPNLE--VPAR-PSVMTS-TPAPKGEPDIIPATRNE 464
Query: 476 PFSLQ-SKATDSRKFQNSGDEVDQPAVS 502
P L+ S + K + VD+ A+S
Sbjct: 465 PIGLKASDFLPAVKVPQQAELVDEDAMS 492
Score = 192 (72.6 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 43/174 (24%), Positives = 85/174 (48%)
Query: 642 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 701
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 481 QQAELVDEDAMSQIRKGHDTMFVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVV 540
Query: 702 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 761
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 541 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL 600
Query: 762 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
+A SVGVDI E+R+ +C CF +L+ + + + G + +EL+L +
Sbjct: 601 AAPPSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGRHGSAFRELHLLM 654
Score = 47 (21.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 508 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 565
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 566 DERYDSLGHKSN 577
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 938 (335.3 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 183/408 (44%), Positives = 270/408 (66%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP+E+LLA+GS+DRT++FWDLE F+++ E VR + FNPDG
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL + +L+G +++QS V +VVD++R
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTR 304
Query: 301 IEPYTIGSVTR--VNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLG 358
+ G+VT+ V S+ ++ + N V S + + S + + VK
Sbjct: 305 VT--RTGTVTQDPVQA-SQPQTQQTPNPGV----SLRRIYERPSTTCSKPQRVKHNSESE 357
Query: 359 RLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQR 406
R S S D +E+ R + QN+E E + S+ TP R
Sbjct: 358 RRSPSSEDDKDERES----RAEI-QNAEDYNE--IFQPKNSISRTPPR 398
Score = 192 (72.6 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 43/174 (24%), Positives = 85/174 (48%)
Query: 642 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 701
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 478 QQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVV 537
Query: 702 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 761
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 538 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL 597
Query: 762 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
+A SVGVDI E+R+ +C CF +L+ + + + G + +EL+L +
Sbjct: 598 AAPPSVGVDISREERLHKCRLCFKQLKSISGLVKSRSGLSGRHGSAFRELHLLM 651
Score = 47 (21.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 508 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 565
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 566 DERYDSLGHKSN 577
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 935 (334.2 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 220/585 (37%), Positives = 316/585 (54%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG 61
TT ++KLQE VAHSS V+ L +G+ S R+L TGGED +VN+WA+ KPN I+SL+GHTS
Sbjct: 6 TTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSA 65
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
+ + F+SSE V AG+ SG+++LWDLE AKI+RTL GH+++ S+DFHP GE+ ASGS+
Sbjct: 66 VGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSV 125
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
D+N+K+WD+R+KGC+ YKGHT+ V + F+PDG+W+ S +D+TVKLWDL AGK++ +F
Sbjct: 126 DSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEF 185
Query: 182 KCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRT 241
H + + FHP+E+LLA+GSADRTVK WDLE F +IGS+ ET VR + FNPDG
Sbjct: 186 TSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSC 245
Query: 242 LLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI 301
L G +L+V+ WEP RC D V VGW ++SDL + +++ SY+ + V +VVD++R+
Sbjct: 246 LYSGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRV 305
Query: 302 EPYTIGSVTRVNGLSESK-----SSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKS 356
+ GSV + GL + K SSA G N S + Q+S+ + +
Sbjct: 306 KKS--GSV--IQGLIQDKPIPAPSSALGTTLRRNYERPTTSCTGQEMKQSSEADRRSPEG 361
Query: 357 LGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKE----SKVLSSTGSVPGTPQRVNLNMG 412
R S++ KE K ++ N E KE V+S T P L
Sbjct: 362 ERRSPSSEDE----KEDKE-SSAEIT-NPEDYKEIFQPRSVISRTPPKTTEPFPAPLEHS 415
Query: 413 SKTSVVNS--------TAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVES 464
SV+ T V+ + + S+ P+ V PR + S
Sbjct: 416 FSESVLEKPGPVVKIVTPVIDRAGQLKGPITSSTPVQRVEPTVIAAAPRPVAVVTTSASS 475
Query: 465 RKDIDVIGRTMPFSLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVADRNTF 524
V+ T P K + + + A L +KA S++ D
Sbjct: 476 PSR-PVVNTTKP-----KPSTGIILSTRNEPIGLNAGDFLSHARNAKA---SAMGDEEAL 526
Query: 525 AAI-KG-SIQGVSVTERNSKEDIFTVSGKSGTMSMS-ESPASYED 566
A I KG V ++ R+ D SG + S +S S D
Sbjct: 527 AQIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVKTSLDSAVSMND 571
Score = 189 (71.6 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 43/180 (23%), Positives = 87/180 (48%)
Query: 636 SSSAEKETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKM 695
S + + +++ DE+A A + + H + SR L +V W DVK ++ + M
Sbjct: 510 SHARNAKASAMGDEEALAQIRKGHDTMCVMLSSRSKNLDSVRSVWASGDVKTSLDSAVSM 569
Query: 696 ADHTVLADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGS 755
D +++ DV++I+ K + LD+C+ +S + ++ L +++ F
Sbjct: 570 NDLSIVVDVLNIINLKPSLWKLDLCTSILPQIEELLQSRYESYVQTGCMSLKLILKRFWP 629
Query: 756 MIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
+I ++A SVGVDI E+R ++C C+ +L+ + + + G + +EL L +
Sbjct: 630 LISDTLNAPPSVGVDITREERHQKCKACYKQLKNLSNVVKNRAEQVGRHGSTFRELQLLM 689
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 934 (333.8 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 185/409 (45%), Positives = 268/409 (65%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP+E+LLA+GS+DRT++FWDLE F+++ E VR + FNPDG
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL V +L+G +++QS V +VVD++R
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVVDLTR 304
Query: 301 I-EPYTIGS--VTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSL 357
+ T+ V L++ + S L + E + A V QNS+ E
Sbjct: 305 VTRTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPSTACNKPQRVKQNSE---SE---- 357
Query: 358 GRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQR 406
R S S D +E+ R + QN+E E + S+ TP R
Sbjct: 358 -RRSPSSEDDRDERES----RAEI-QNTEEYNE--IFQPKNSISRTPPR 398
Score = 186 (70.5 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 41/168 (24%), Positives = 82/168 (48%)
Query: 648 DEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSI 707
DEDA + + + H + SR L V W D+K ++ + + D +V+ D+++I
Sbjct: 484 DEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDLLNI 543
Query: 708 VVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISASTSV 767
V +K + LD+C+ +S + ++ L +++ F +I ++A SV
Sbjct: 544 VNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAPPSV 603
Query: 768 GVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
GVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 604 GVDISREERLHKCRLCYKQLKSISGLVKSKSSLSGRHGSAFRELHLLM 651
Score = 47 (21.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 508 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 565
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 566 DERYDSLGHKSN 577
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 935 (334.2 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 182/409 (44%), Positives = 265/409 (64%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAHSS V+ L +G+ + R+L TGG+D +VN+W++ KPN ++SL+GHT+
Sbjct: 5 VVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
I+S+ + E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+G F ASGS
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
LDT++K+WD+R+KGCI YK HT+ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 184
Query: 181 FKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG 239
F H G + ++FHP E+LLA+GS+ T++FWDLE F ++ E + VRC+ FNPDG
Sbjct: 185 FTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 244
Query: 240 RTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDIS 299
L G +SL+V+ WEP RC D V V W +++DL+V +L+G S+ QS V +VVD+S
Sbjct: 245 CCLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLS 304
Query: 300 RIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGR 359
R+ GSV +GL + + +S + S + S S + VK + R
Sbjct: 305 RVTKS--GSVP--HGLLRNNELLAQPTPT--GSSLRRSYDRPSTSCSKPQRVKHSSESER 358
Query: 360 LSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 408
S S D KE+K + QN E KE + ++ TP +N
Sbjct: 359 RSPSSEEDRDEKESK-----AEIQNPEDYKE--IFQPRNAISRTPPHIN 400
Score = 164 (62.8 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 39/175 (22%), Positives = 83/175 (47%)
Query: 644 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMA---DHTV 700
A ++DE+ + + + H + SR L V W +D+K ++++ D +V
Sbjct: 483 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKARMNSVDAAVATNDLSV 542
Query: 701 LADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSA 760
+ D+++IV + + LD+C+ +S + ++ L +++ F +I
Sbjct: 543 VVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDI 602
Query: 761 ISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
++A SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 603 LAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 657
Score = 48 (22.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 515 VSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGH 574
V SV N ++ G + + ++KE++ +SG++ + + A+ + R LGH
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-KILR-TLLGH 104
Query: 575 KSN 577
K+N
Sbjct: 105 KAN 107
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 920 (328.9 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 180/409 (44%), Positives = 260/409 (63%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAHSS V+ L +G+ + R+L TGG+D +VN+W++ KPN ++SL+GHT+
Sbjct: 5 VVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
I+S+ + E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+G F ASGS
Sbjct: 65 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
LDT++K+WD+R+KGCI YK HT+ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP E+ LA RT++FWDLE F ++ E + VRC+ FNPDG
Sbjct: 185 FTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL+V +L+G S+ QS V +VVD+SR
Sbjct: 245 CLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLSR 304
Query: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVS-QNSDPLVKETKSLGR 359
+ GSV +GL + + +S + S + S S VK + R
Sbjct: 305 VTKS--GSVP--HGLLRNNELLAQPTPT--GSSLRRSYDRPSTSCSKPQSRVKHSSESER 358
Query: 360 LSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 408
S S D KE+K + QN E KE + ++ TP +N
Sbjct: 359 RSPSSEEDRDEKESK-----AEIQNPEDYKE--IFQPRNAISRTPPHIN 400
Score = 177 (67.4 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 644 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLAD 703
A ++DE+ + + + H + SR L V W +D+K ++ A D +V+ D
Sbjct: 486 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAVATNDLSVVVD 545
Query: 704 VMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISA 763
+++IV + + LD+C+ +S + ++ L +++ F +I ++A
Sbjct: 546 LLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAA 605
Query: 764 STSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 606 PPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 657
Score = 48 (22.0 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 515 VSSVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGH 574
V SV N ++ G + + ++KE++ +SG++ + + A+ + R LGH
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA-KILR-TLLGH 104
Query: 575 KSN 577
K+N
Sbjct: 105 KAN 107
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 896 (320.5 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 179/409 (43%), Positives = 261/409 (63%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAHSS V+ L +G+ + R+L TGG+D +VN+W++ + L L+GHT+
Sbjct: 5 VVTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTT 63
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
I+S+ + E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+G F ASGS
Sbjct: 64 PIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGS 123
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
LDT++K+WD+R+KGCI YK HT+ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 124 LDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE 183
Query: 181 FKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG 239
F H G + ++FHP E+LLA+GS+ T++FWDLE F ++ E + VRC+ FNPDG
Sbjct: 184 FTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
Query: 240 RTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDIS 299
L G +SL+V+ WEP RC D V V W +++DL+V +L+G S+ QS V +VVD+S
Sbjct: 244 CCLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLSVCHNQLIGVSFAQSTVSSFVVDLS 303
Query: 300 RIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGR 359
R+ GSV +GL + + +S + S + S S + VK + R
Sbjct: 304 RVTKS--GSVP--HGLLRNNELLAQPTPT--GSSLRRSYDRPSTSCSKPQRVKHSSESER 357
Query: 360 LSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVN 408
S S D KE+K + QN E KE + ++ TP +N
Sbjct: 358 RSPSSEEDRDEKESK-----AEIQNPEDYKE--IFQPRNAISRTPPHIN 399
Score = 164 (62.8 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
Identities = 39/175 (22%), Positives = 83/175 (47%)
Query: 644 ASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMA---DHTV 700
A ++DE+ + + + H + SR L V W +D+K ++++ D +V
Sbjct: 482 AELTDEEIMSQIRKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKARMNSVDAAVATNDLSV 541
Query: 701 LADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSA 760
+ D+++IV + + LD+C+ +S + ++ L +++ F +I
Sbjct: 542 VVDLLNIVNQTASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDI 601
Query: 761 ISASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
++A SVGVDI E+R+ +C C+ +L+ + + G + +EL+L +
Sbjct: 602 LAAPPSVGVDITREERLHKCRLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLM 656
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 206/560 (36%), Positives = 323/560 (57%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP+E+LLA+GS+DRT++FWDLE F+++ E VR + FNPDG
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL + +L+G +++QS V +VVD++R
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTR 304
Query: 301 IEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPL-VKETKSLGR 359
+ G+V R + + + + A + N ++ + + + S P VK+ R
Sbjct: 305 VT--RTGTVAR-DPVQDHRPLAQ---PLPNPSAPLRRIYERPSTTCSKPQRVKQNSESER 358
Query: 360 LSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVN 419
S S D +E+ R + QN+E E + S+ TP R + +
Sbjct: 359 RSPSSEDDRDERES----RAEI-QNAEDYNE--IFQPKNSISRTPPRRSEPFPAPPEDDA 411
Query: 420 STAVVSKRTSTRANTASNVPILNKSDIVPVIVPRTNTRFEQAVESRKDIDVIG-RTMPFS 478
+TA + + S + VP L PV+ + E A+ + IG + F
Sbjct: 412 ATAKEAAKPSPAMDVQFPVPNLEVLPRPPVVASTPAPKAEPAIIPATRNEPIGLKASDFL 471
Query: 479 LQSKATDSRKFQNSGDEVDQ--PAVSVLCENTGSKATEVSSVADRNTFAAIKGSIQG-VS 535
K + + D + Q +C S+ + +V T IK S+ V+
Sbjct: 472 PAVKIPQQAELVDE-DAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVA 530
Query: 536 VTERNSKEDIFTVSGKSGTM 555
+ + + D+ + + ++
Sbjct: 531 INDLSVVVDLLNIVNQKASL 550
Score = 189 (71.6 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 42/174 (24%), Positives = 85/174 (48%)
Query: 642 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 701
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 478 QQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTMGDIKTSVDSAVAINDLSVV 537
Query: 702 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 761
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 538 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDML 597
Query: 762 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
+A SVGVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 598 AAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSTFRELHLLM 651
Score = 47 (21.6 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 508 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 565
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 566 DERYDSLGHKSN 577
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 213/574 (37%), Positives = 329/574 (57%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H G + ++FHP+E+LLA+GS+DRT++FWDLE F+++ E VR + FNPDG
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGC 244
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
L G +SL+V+ WEP RC D V V W +++DL + +L+G +++QS V +VVD++R
Sbjct: 245 CLYSGCQDSLRVYGWEPERCFDVVLVHWGKVADLAICNNQLIGVAFSQSNVSSYVVDLTR 304
Query: 301 IEPYTIGSVTRVNGLSESKSSA------SGNLSVLNENSAKASLGKLSVSQNSDPLVKET 354
+ G+V R + + +S+ S L + E + A V QNS+ E
Sbjct: 305 VT--RTGTVAR-DPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSE---SE- 357
Query: 355 KSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSK 414
R S S D +E+ R + QN+E E + S+ TP R + +
Sbjct: 358 ----RRSPSSEDDRDERES----RAEI-QNAEDYNE--IFQPKNSISRTPPRRSEPFPAP 406
Query: 415 TSVVNSTAVVSKRTSTRANTASNVPIL--NKSDIVPVIVPRTNTRFEQAVESRKDIDVIG 472
+TA + + S + VP + + + V+ A ++ I
Sbjct: 407 PEDDMATAKEAAKPSPATDAQFPVPNICPGGAGTLEVLSRPPVVTSTPAPKAEPAIFPAT 466
Query: 473 RTMPFSLQSKATD---SRKFQNSGDEVDQPAVS-------VLCENTGSKATEVSSVADRN 522
R P L KA+D + K + VD+ A+S +C S+ + +V
Sbjct: 467 RNEPIGL--KASDFLPAVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRGVW 524
Query: 523 TFAAIKGSIQG-VSVTERNSKEDIFTVSGKSGTM 555
T IK S+ V++ + + D+ + + ++
Sbjct: 525 TTGDIKTSVDSAVAINDLSVVVDLLNIVNQKASL 558
Score = 188 (71.2 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 42/174 (24%), Positives = 85/174 (48%)
Query: 642 ETASVSDEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVL 701
+ A + DEDA + + + H + SR L V W D+K ++ + + D +V+
Sbjct: 486 QQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAINDLSVV 545
Query: 702 ADVMSIVVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAI 761
D+++IV +K + LD+C+ +S + ++ L +++ F +I +
Sbjct: 546 VDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL 605
Query: 762 SASTSVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
+A SVGVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 606 AAPPSVGVDISREERLHKCRLCYKQLKSISNLVKSKSGLSGRHGSAFRELHLLM 659
Score = 47 (21.6 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 508 TGSKATEVS--SVADRNTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYE 565
TG V+ S+ N ++ G V N+ E++ +SG++ + + A+ +
Sbjct: 38 TGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA-K 96
Query: 566 DERYDSLGHKSN 577
R +GHK+N
Sbjct: 97 ILR-TLMGHKAN 107
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 210/606 (34%), Positives = 320/606 (52%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI----GSAGP-ETSGVRCLTF 235
F H G + ++FHP+E+LLA+GS+DRT++FWDLE F+++ G GP +G +
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGL 244
Query: 236 NPDGRTLLC----GL----HESLKVFSWEPIRCHDAV-DVGWSRLSDLNVHEGKLLGCSY 286
+P + + C G+ H S +F P D + SRL + GC
Sbjct: 245 SPPPKVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPD--GCCL 302
Query: 287 NQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQN 346
C + + EP V V S K + +L+V N+ + + +VS
Sbjct: 303 YSGCQDS--LRVYGWEPERCFDVVLV---SWGKVA---DLAVCNDQLIGVAFSQSNVSSY 354
Query: 347 SDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQR 406
L + T++ G +V+Q DP+ ++++ L + + S P + ++ + PQR
Sbjct: 355 VVDLTRVTRT-G--TVAQ--DPV-QDSRPLAQ-QPAHPSAPLR--RIYERPSTACNKPQR 405
Query: 407 VNLNMGSKTSVVNSTAVVSKRTSTRA---NTASNVPILNKSDIVPVIVPRTNTRFEQAVE 463
V N S+ +S +R S RA NT I + + PR + F E
Sbjct: 406 VKQNSESERRSPSSEDDRDERES-RAEIQNTEEYNEIFQPKNSISRTPPRRSEPFPAPPE 464
Query: 464 SRKDIDVIGRTMPFSLQSKATDSRKFQNSGDEV--DQPAVSVLCENTGSKATEVSSVADR 521
D + + S ATDS+ F EV PAV+ KA A R
Sbjct: 465 -----DDMATAKEVAKPSPATDSQ-FPVPNLEVLLRPPAVT---STPAPKAEPAIIPATR 515
Query: 522 NTFAAIKGSIQGVSVTERNSKEDIFTVSGKSGTMSMSESPASYEDERYDSLGHKSNRDGY 581
N +K S + V+ + ++ GK T ++ +SY G R +
Sbjct: 516 NEPIGLKAS-DFLPVSGGPAPGQGGSLWGKDRTSPLAPGHSSYAGREDPPAGGAGRRGRH 574
Query: 582 AMESQK 587
+ Q+
Sbjct: 575 VTDPQR 580
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 117/206 (56%), Positives = 166/206 (80%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++SV ++ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DTN+K+WDIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +
Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSAD 206
F H G + ++FHP+E+LLA+GS+D
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 261 (96.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 54/189 (28%), Positives = 92/189 (48%)
Query: 58 HTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
H S + S+ +S L+A G + LW + + + +LTGH S SV + E
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK 176
+GS ++++WD+ + T GH + ++ F P G +V SG +D +KLWD+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN 236
+ ++ H ++C+ F P LA+ + D TVK WDL +++ T V + F+
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 237 PDGRTLLCG 245
P+ L G
Sbjct: 199 PNEYLLASG 207
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 25/116 (21%), Positives = 53/116 (45%)
Query: 142 HTRGVNAIRF-TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL 200
H V+++ GR + +GG+D V LW + + H ++ + + E L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 201 ATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 133
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 107/192 (55%), Positives = 154/192 (80%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++E VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS ++SV +
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ E L+ AG+ SG+I++WDLE AKI+RTL GH++N S+DFHP+GEF ASGS DTN+K+W
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
DIR+KGC+ Y+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +F H G +
Sbjct: 137 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 196
Query: 189 QCIDFHPHEFLL 200
++FHP+E+LL
Sbjct: 197 NVVEFHPNEYLL 208
Score = 262 (97.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 53/189 (28%), Positives = 93/189 (49%)
Query: 51 AILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
A+ + H S + S+ +S L+A G + LW + + + +LTGH S SV
Sbjct: 16 AVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 75
Query: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ E +GS ++++WD+ + T GH + ++ F P G +V SG +D +KL
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + ++ H ++C+ F P LA+ + D TVK WDL +++ T
Sbjct: 136 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 195
Query: 230 VRCLTFNPD 238
V + F+P+
Sbjct: 196 VNVVEFHPN 204
Score = 254 (94.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 49/150 (32%), Positives = 76/150 (50%)
Query: 94 VRTLTGHRSNCISVDF-HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
V + H SN S+ G A+G D + +W I K CI + GHT V ++R
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 153 PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
+V+G + ++++WDL A K+L H+ I +DFHP+ +A+GS D +K W
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
Query: 213 DLETFELIGSAGPETSGVRCLTFNPDGRTL 242
D+ + + VRCL F+PDG+ L
Sbjct: 137 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWL 166
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 25/116 (21%), Positives = 53/116 (45%)
Query: 142 HTRGVNAIRF-TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL 200
H V+++ GR + +GG+D V LW + + H ++ + + E L+
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 82
Query: 201 ATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
GS +++ WDLE +++ + + + L F+P G + G ++ + W+
Sbjct: 83 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDT-NIKLWD 137
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 572 (206.4 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 115/302 (38%), Positives = 169/302 (55%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
K+ + AH S V L +G ++ RVLVTGGED VNLWAIG+ +SL+GH ID V F
Sbjct: 10 KIYDIKAHDSRVTSLDLG-ETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRF 68
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ V + G I+ WDL KI TL GH + ++DF+P GE+ SGS DT +++
Sbjct: 69 AYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVVSGSNDTTVRL 128
Query: 128 WDIRKKG-CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
WD++ + CI +GH VN+++F+PDG W+ S G + ++ +WD+ K + +F
Sbjct: 129 WDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPP 188
Query: 187 --QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGP-ETSGVRCLTFNPDGRTLL 243
I C+ FHP EFLLA G D TV +DLE +L+ +RC+TF+ +G L
Sbjct: 189 VTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQAIRCITFSDNGECLF 248
Query: 244 CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLL-GCSYNQSCVGVWVVDISRIE 302
G + V WEP R D + WS L+D+ V KL+ GC + V + + + R+
Sbjct: 249 VGSSSGISVIGWEPDRELDHIKSTWSFLADMKVVNNKLICGC-HEIDTVSINTISLDRVI 307
Query: 303 PY 304
P+
Sbjct: 308 PF 309
Score = 102 (41.0 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 649 EDATADVMEQ-HSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSI 707
+D D++ + H + + +R + L + +DV GA+ + ++ D++
Sbjct: 658 DDHDFDMLSRSHEAVLQELSNRQSSLDLLRHATRSHDVLGALR-QARSCGKSIFIDLLGA 716
Query: 708 VVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAIS--AST 765
++EK LD C +S H + + D L ++ F I + A+
Sbjct: 717 ILEKPSSWNLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNFLPTIQENLDSWAAN 776
Query: 766 SVGVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAK 806
+GVD+ E R +C C L ++K LP G ++++
Sbjct: 777 GLGVDVTREDRQRKCAECQRWLLQIKN-LPESTHFGSTLSQ 816
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 470 (170.5 bits), Expect = 5.5e-44, P = 5.5e-44
Identities = 129/431 (29%), Positives = 215/431 (49%)
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH++ V +RF+PDG+W+ S +D+TVKLWDLTAGK++ +F H G + ++FHP+E+L
Sbjct: 1 QGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL 60
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIR 259
LA+GS+DRT++FWDLE F+++ E VR + FNPDG L G +SL+V+ WEP R
Sbjct: 61 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPER 120
Query: 260 CHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGS--VTRVNGLS 316
C D V V W +++DL + +L+G +++QS V +VVD++R+ T+ V L+
Sbjct: 121 CFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVVDLTRVTRTGTVAQDPVQDSRPLA 180
Query: 317 ESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTL 376
+ S L + E + A V QNS+ E R S S D +E+
Sbjct: 181 QQPPHPSAPLRRIYERPSTACSKPQRVKQNSE---SE-----RRSPSSEDDRDERES--- 229
Query: 377 GRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNSTAVVSKRTSTRANTAS 436
R + QN+E E + S+ TP R + + +TA + + S +
Sbjct: 230 -RAEI-QNTEDYNE--IFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKPSPATDVQF 285
Query: 437 NVPILNKSDI-VPVIVPRTNTRFEQAVESRKDIDVIGRTMPFSLQSKATD---SRKFQNS 492
VP + S V ++P T + + +I T + KA+D + K
Sbjct: 286 PVPNVCPSGTGVLEVLPGPPTVVTSTPAPKAEPAIIPATRNEPIGLKASDFLPAVKIPQQ 345
Query: 493 GDEVDQPAVS-------VLCENTGSKATEVSSVADRNTFAAIKGSIQG-VSVTERNSKED 544
+ +D+ A+S +C S+ + +V T IK S+ V++ + + D
Sbjct: 346 VELLDEDAMSQIRKGHDTMCVVLTSRHKNLDTVWAAWTTGDIKTSVDSAVAINDLSVVVD 405
Query: 545 IFTVSGKSGTM 555
+ + + ++
Sbjct: 406 LLNIVNQKASL 416
Score = 188 (71.2 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 41/168 (24%), Positives = 83/168 (49%)
Query: 648 DEDATADVMEQHSQFVSSMQSRLAKLQAVYRYWERNDVKGAISAMQKMADHTVLADVMSI 707
DEDA + + + H + SR L V+ W D+K ++ + + D +V+ D+++I
Sbjct: 350 DEDAMSQIRKGHDTMCVVLTSRHKNLDTVWAAWTTGDIKTSVDSAVAINDLSVVVDLLNI 409
Query: 708 VVEKIEIVTLDICSCXXXXXXXXXESDMDRHLSISLDILLKLVRTFGSMIYSAISASTSV 767
V +K + LD+C+ +S + ++ L +++ F +I ++A SV
Sbjct: 410 VNQKASLWKLDLCTTILPQIEKLLKSKYESYVQTGCTSLKLILKRFLPLITDMLAAPPSV 469
Query: 768 GVDIEAEQRIERCNRCFIELEKVKCCLPTLMRRGGSVAKSAQELNLAL 815
GVDI E+R+ +C C+ +L+ + + + G + +EL+L +
Sbjct: 470 GVDISREERLHKCRLCYKQLKSISGFVKSKSSLSGRHGSAFRELHLLM 517
Score = 173 (66.0 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 37/116 (31%), Positives = 57/116 (49%)
Query: 57 GHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
GH+ + + F +A+ A T+KLWDL K++ GH V+FHP
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNT-VKLWD 171
ASGS D ++ WD+ K + +G V ++ F PDG + SG +D+ V W+
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 117
Score = 172 (65.6 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS V CL+ + L + +DH V LW + + GHT ++ V F +E L+
Sbjct: 3 HSQAVRCLRFS-PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A+G++ TI+ WDLE+ ++V + G SV F+P G SG D+ L+++ +
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDS-LRVYGWEPER 120
Query: 135 C 135
C
Sbjct: 121 C 121
Score = 158 (60.7 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 35/124 (28%), Positives = 62/124 (50%)
Query: 99 GHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWV 158
GH + F P G++ AS + D +K+WD+ + + GHT VN + F P+ +
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 159 VSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT-VKFWDLET- 216
SG D T++ WDL +++ + G ++ + F+P L +G D V W+ E
Sbjct: 62 ASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERC 121
Query: 217 FELI 220
F+++
Sbjct: 122 FDVV 125
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 407 (148.3 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 92/292 (31%), Positives = 149/292 (51%)
Query: 8 KLQEFV-AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
+LQ+ + +HS +V + ++L + D + +W SL G + + SV+
Sbjct: 867 ELQQTLDSHSQSVRSVAFS-PDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVA 925
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
F +A+G+ T+KLW+ ++++TL GH + SV F P G+ AS S DT +K
Sbjct: 926 FSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIK 985
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
+W+ T+KGH + A+ F+PDG+ +VSG +DNT+KLWDL +L + H
Sbjct: 986 LWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSR 1045
Query: 187 QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL 246
+ + F P + LA+ S D T+K WD T EL + + GVR +TF+PDG+ L
Sbjct: 1046 SVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNS 1105
Query: 247 HE-SLKVFSWEPIRCH-DAVDVGWSRLSDLNVH--EGKLLGCSYNQSCVGVW 294
++ ++K+ W P+ G S D +GK L Y S + +W
Sbjct: 1106 YDGTIKL--WNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Score = 390 (142.3 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 83/250 (33%), Positives = 131/250 (52%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
Q F H + + + LV+G +D+ + LW + SL H+ + +V+F
Sbjct: 996 QTFKGHDLWIRAVAFS-PDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP 1054
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ +A+ + TIKLWD ++ RTL GH SV F P G+ AS S D +K+W+
Sbjct: 1055 DDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN 1114
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
T G + V+++ F+PDG+ + SG D+T+KLWD G+LL + H +IQ
Sbjct: 1115 PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQ 1174
Query: 190 CIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH-E 248
+ F P LLA+GS D+T K WD T EL+ + V + F+PDG+ L + E
Sbjct: 1175 SVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGE 1234
Query: 249 SLKVFSWEPI 258
++K+ W+P+
Sbjct: 1235 TIKL--WDPV 1242
Score = 366 (133.9 bits), Expect = 9.5e-30, P = 9.5e-30
Identities = 79/248 (31%), Positives = 129/248 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
LQ HS TV L ++L +G D+ ++LW + + GH I SV+F
Sbjct: 785 LQTLDGHSGTVESLAFS-PDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFA 843
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+A+ + TIK+WDL ++ +TL H + SV F P G+ AS SLD+ +K+W
Sbjct: 844 PDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+ + +G + V ++ F+PDG+ + SG E NTVKLW+ G+LL + H +
Sbjct: 904 NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSV 963
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ + F P LA+ S+D T+K W+ T EL + +R + F+PDG+ L+ G +
Sbjct: 964 RSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDD 1023
Query: 249 SLKVFSWE 256
+ + W+
Sbjct: 1024 NT-IKLWD 1030
Score = 361 (132.1 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 83/252 (32%), Positives = 129/252 (51%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
Q HS +V+ + + L + D + LW +L GH+ G+ SV+F
Sbjct: 1038 QSLEDHSRSVHAVAFS-PDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSP 1096
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNLKIW 128
L+A+ + GTIKLW+ ++ +TLTG RS+ + SV F P G+ ASG D+ +K+W
Sbjct: 1097 DGKLLASNSYDGTIKLWNPLTGELQQTLTG-RSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
D + T +GH+ + ++ F+PDG+ + SG D T KLWD G+LL F+ H +
Sbjct: 1156 DSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWV 1215
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ + F P LLA+ S T+K WD T EL+ + + F+PDG L
Sbjct: 1216 ESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLA----- 1270
Query: 249 SLKVFS---WEP 257
S+ +F W+P
Sbjct: 1271 SVDIFDTKIWDP 1282
Score = 352 (129.0 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 96/353 (27%), Positives = 174/353 (49%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
LV+G D V +W + +L GH+ ++S++F L+A+G+ TI LWD
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG 824
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
++++T GH + SV F P G+ AS S D+ +KIWD+ T H++ V ++ F
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAF 884
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
+PDG+ + S D+T+K+W+ G+L + G ++ + F P LA+GS TVK
Sbjct: 885 SPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKL 944
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS------WEPIRCHDAV 264
W+ T EL+ + + VR + F+PDG+ L ++ +K+++ + + HD
Sbjct: 945 WNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDL- 1003
Query: 265 DVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLS---ESKSS 321
W R + +GK L + + + +W + S ++ V+ ++ + K
Sbjct: 1004 ---WIRAVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQL 1059
Query: 322 ASGNL--SVLNENSAKASLGKLSVSQNSDPLVKETKSL-GRLSVSQNSDPLLK 371
AS +L ++ +SA L + ++ +S + T S G+L S + D +K
Sbjct: 1060 ASSSLDSTIKLWDSATGELQR-TLEGHSQGVRSVTFSPDGKLLASNSYDGTIK 1111
Score = 346 (126.9 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 87/322 (27%), Positives = 152/322 (47%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L H ++SV F + +G+ T+K+WD ++++TL GH S+ F P G
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+ ASGS D + +WD + T++GH + ++ F PDG+ + S +D+T+K+WDL
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
G+L H ++ + F P LLA+ S D T+K W+ T EL S + V+ +
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSV 924
Query: 234 TFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH---EGKLLGCSYNQSC 290
F+PDG+ L G E V W P + S +V +GK L S + +
Sbjct: 925 AFSPDGKKLASG-SEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTT 983
Query: 291 VGVWVVDISRIEPYTIGSVTRVNGLS---ESKSSASGNLSVLNENSAKASLGKLSVSQNS 347
+ +W ++ G + ++ + K SG+ ++N+ K L L+ S+
Sbjct: 984 IKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGS----DDNTIK--LWDLATSELQ 1037
Query: 348 DPLVKETKSLGRLSVSQNSDPL 369
L ++S+ ++ S + L
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQL 1059
Score = 339 (124.4 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 81/290 (27%), Positives = 137/290 (47%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
LQ HS +V + + L + D + LW + GH I +V+F
Sbjct: 953 LQTLEGHSQSVRSVAFS-PDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFS 1011
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ +G+ TIKLWDL +++ ++L H + +V F P + AS SLD+ +K+W
Sbjct: 1012 PDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLW 1071
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
D T +GH++GV ++ F+PDG+ + S D T+KLW+ G+L +
Sbjct: 1072 DSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV 1131
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P LA+G D T+K WD T EL+ + + ++ + F+PDG+ L G ++
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYD 1191
Query: 249 SLKVFSWEPIRCHDAVDV--GWSRLSDLNVH--EGKLLGCSYNQSCVGVW 294
W+P + + + G S+ + +GKLL S + +W
Sbjct: 1192 QTAKL-WDPAT-GELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Score = 297 (109.6 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 73/214 (34%), Positives = 106/214 (49%)
Query: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
W E+ +TL H SV F P G+ SGS D +KIWD + T GH+
Sbjct: 739 WSAEQ----QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT 794
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
V ++ F+PDG+ + SG DNT+ LWD G+LL F+ H I + F P LA+ S
Sbjct: 795 VESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASD 854
Query: 206 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPI--RCHD 262
D T+K WDL T EL + + VR + F+PDG+ L L ++KV W P
Sbjct: 855 DSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKV--WNPATGELQQ 912
Query: 263 AVD--VGWSRLSDLNVHEGKLLGCSYNQSCVGVW 294
+++ GW + + +GK L ++ V +W
Sbjct: 913 SLEGRSGWVKSVAFSP-DGKKLASGSEKNTVKLW 945
Score = 204 (76.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 48/153 (31%), Positives = 71/153 (46%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L +G D + LW + +L GH+ I SV F L+A+G+ T KLWD
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG 1202
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
++++ GH SV F P G+ AS S +K+WD + T ++ F
Sbjct: 1203 ELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAF 1262
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+PDG + S +T K+WD G+LL K H
Sbjct: 1263 SPDGNRLASVDIFDT-KIWDPATGELLQALKGH 1294
Score = 157 (60.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
LQ HS + + + ++L +G D LW + GH+ ++SV+F
Sbjct: 1163 LQTLEGHSDRIQSV-VFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFS 1221
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL-DTNLKI 127
L+A+ + TIKLWD ++++TL + SV F P G AS + DT KI
Sbjct: 1222 PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT--KI 1279
Query: 128 WDIRKKGCIHTYKGHTRGV 146
WD + KGH++ V
Sbjct: 1280 WDPATGELLQALKGHSKWV 1298
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 282 (104.3 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 57 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 116
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 117 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 176
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 177 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 236
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 237 KKSGKPGPFLLSGS 250
Score = 280 (103.6 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 21 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 79
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 140 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 199
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 200 TKECKAELREHEHVVECISWAPE 222
Score = 212 (79.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 158
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 196
Score = 191 (72.3 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 182 (69.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 188 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 243
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 303
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 304 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 13 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 71
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 72 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 131
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 132 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 189
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 190 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 249
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 250 SRDKTIK 256
Score = 163 (62.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 148 (57.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 84 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 142
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 143 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 202
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 203 CKAELREHEHVVECISWAPESSY 225
Score = 114 (45.2 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 301
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 302 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 343
Score = 98 (39.6 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 242 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 342
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 330 (121.2 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 74/251 (29%), Positives = 113/251 (45%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ +V H V ++ + +L + D V LW K HT+ + S
Sbjct: 52 RAYR---YVGHKDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 107
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + +A + +IK+W + + + +L H F P G S S D
Sbjct: 108 VDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F P G + S G D TVK+WD+ KLL ++ H
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 227
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
G + CI FHP + L T S+D T+K DL LI + T V ++F+ G
Sbjct: 228 SGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 245 GLHESLKVFSW 255
G ++ +V W
Sbjct: 288 GGADT-QVLLW 297
Score = 322 (118.4 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 71/243 (29%), Positives = 124/243 (51%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGIDSVSFDSS 70
F H + + L + + + L T D + LW KP+A GH + SV F
Sbjct: 14 FKGHKAAITSLDLS-PNGKQLATASWDTFLMLWNF-KPHARAYRYVGHKDVVTSVQFSPH 71
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
L+A+ + T++LW ++ H + SVDF G+F A+ S D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
++ +++ HT V +F+PDGR +VS ED T+K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S 249
+DF+P +A+ +D+TVK WD+ +L+ + GV C++F+P L+ + +
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGT 251
Query: 250 LKV 252
LK+
Sbjct: 252 LKI 254
Score = 293 (108.2 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 65/216 (30%), Positives = 101/216 (46%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
KR K EF AH++ V + + L T ED + +W++ + + SL HT +
Sbjct: 91 KRG-KFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 148
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
F L+ + + TIK+WD + V + VDF+P G AS D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+K+WD+R + Y+ H+ GVN I F P ++V+ D T+K+ DL G+L++ +
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQG 268
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFEL 219
H G + + F L A+G AD V W EL
Sbjct: 269 HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 281 (104.0 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 72/253 (28%), Positives = 124/253 (49%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GH++ S+D P G+ A+ S DT L +W+ + + Y GH V +
Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
++F+P G + S D TV+LW +FK H ++ +DF LAT S D++
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRC-HDAVD- 265
+K W + + S T VRC F+PDGR ++ C +++K++ +C ++ D
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 266 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKS---- 320
VG++ D N G + + + V VW V ++++ + Y + S VN +S S
Sbjct: 186 VGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS-GGVNCISFHPSDNYL 243
Query: 321 ---SASGNLSVLN 330
S+ G L +L+
Sbjct: 244 VTASSDGTLKILD 256
Score = 50 (22.7 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 450 IVPRTNTRFEQAVESRKDIDVIGRTMP 476
I PRT E+ VE+ + + GRT+P
Sbjct: 328 IYPRTPHPHEEKVETVETTETSGRTLP 354
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 344 (126.2 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 78/248 (31%), Positives = 126/248 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
Q HSS+V + + ++L +G D + LW + ++ GH+ ++SV+F
Sbjct: 77 QTLEGHSSSVQSVAFS-PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAF-- 133
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ +G +LW+ + T+ GH +SV F P G+ ASGS + +K+WD
Sbjct: 134 --------SPNG--QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
G HT GH+ V + F+PDGR + SG D T+KLWD +G L H + H +I+
Sbjct: 184 SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIE 243
Query: 190 CIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES 249
+ F P+ LLA+GS+D T+K WD T + + V + F+PD + L G ++
Sbjct: 244 SLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDN 303
Query: 250 LKVFSWEP 257
+ W+P
Sbjct: 304 T-IKLWDP 310
Score = 330 (121.2 bits), Expect = 8.3e-29, P = 8.3e-29
Identities = 73/204 (35%), Positives = 112/204 (54%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH+ I++V+F L+A+G+ TIKLWD + +TL GH S+ SV F P G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+ ASGS DT +K+W+ HT +GH+ V ++ F+P+G+ LW+
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ------------LWNPA 143
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
G L H + H + + F P LLA+GSA++T+K WD T L + G ++ V L
Sbjct: 144 IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL 203
Query: 234 TFNPDGRTLLCGLHESLKVFSWEP 257
F+PDGR L G +++ + W+P
Sbjct: 204 VFSPDGRLLASGSNDAT-IKLWDP 226
Score = 328 (120.5 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 76/216 (35%), Positives = 111/216 (51%)
Query: 43 LW--AIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH 100
LW AIG ++ GH+ + SV+F L+A+G+A TIKLWD + TL GH
Sbjct: 139 LWNPAIGSLKH--TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 101 RSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVS 160
+ + + F P G ASGS D +K+WD HT +GH+ + ++ F+P+G+ + S
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 161 GGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
G D T+KLWD G H K H + + F P LL +GS D T+K WD T L
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILK 316
Query: 221 GSAGPETSG-VRCLTFNPDGRTLLCGLHESLKVFSW 255
S T G VR + F+ + L+ L + + +W
Sbjct: 317 HSM--RTPGIVRSIEFSIELPQLITNLG-TFSIQAW 349
Score = 308 (113.5 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 74/249 (29%), Positives = 121/249 (48%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+LQ HS + + R+L +G D + LW +L GH+S + SV+F
Sbjct: 33 ELQTLEGHSDWIETVTFS-PDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAF 91
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ L+A+G++ TIKLW+ + T+ GH SV F P G+ + N I
Sbjct: 92 SPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW-------NPAI 144
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
++ HT +GH+ V ++ F+PDG+ + SG + T+KLWD L H H
Sbjct: 145 GSLK-----HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW 199
Query: 188 IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLH 247
+ + F P LLA+GS D T+K WD + L + ++ + L F+P+G+ L G
Sbjct: 200 VLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSS 259
Query: 248 ESLKVFSWE 256
++ + W+
Sbjct: 260 DAT-IKLWD 267
Score = 276 (102.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 60/183 (32%), Positives = 93/183 (50%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
++L +G + + LW +L GH++ + + F L+A+G+ TIKLWD
Sbjct: 168 QLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPP 227
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
+ TL GH + S+ F P G+ ASGS D +K+WD HT KGH+ V ++
Sbjct: 228 SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSV 287
Query: 150 RFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTV 209
F+PD + + SG DNT+KLWD G L H + G ++ I+F L T ++
Sbjct: 288 VFSPDSQLLESGSGDNTIKLWDPATGILKHSMRT-PGIVRSIEFSIELPQLITNLGTFSI 346
Query: 210 KFW 212
+ W
Sbjct: 347 QAW 349
Score = 229 (85.7 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 68/242 (28%), Positives = 114/242 (47%)
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
++TL GH +V F P G ASGS DT +K+WD G T +GH+ V ++ F+P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 154 DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL--ATGSADRTVKF 211
+G+ + SG D T+KLW+ + L H + H +++ + F P+ L A GS T++
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE- 152
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG--- 267
G + V + F+PDG+ L G E ++K+ W+ C +G
Sbjct: 153 ------------G-HSDWVLSVAFSPDGQLLASGSAEKTIKL--WDSATCGLKHTLGGHS 197
Query: 268 -WSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSS---AS 323
W L + +G+LL N + + +W ++ G ++ L+ S + AS
Sbjct: 198 NWV-LPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 324 GN 325
G+
Sbjct: 257 GS 258
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 343 (125.8 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 79/249 (31%), Positives = 127/249 (51%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H + L S + + +G D V +W + + +GH + V F
Sbjct: 12 RNFKGHRDAITSLDFS-PSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSP 70
Query: 70 SEVLVAAGAASGTIKLW--DLE-EAKIVRTLTGH-RSNCISVDFHPFGEFFASGSLDTNL 125
S L+A+ + T++LW ++ E+ + R TG RS C S D G+ + S D ++
Sbjct: 71 SAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSAD----GQSLLTASDDQSI 126
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + ++ I T + H V RF+PDG+ +VS +D TVKLWD ++ +L+H F C
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTF-CEP 185
Query: 186 GQIQC-IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
G +DFHP +AT S+D TV+ WD+ T L+ ++ V L+F+P G LL
Sbjct: 186 GGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLT 245
Query: 245 GLHES-LKV 252
+S LK+
Sbjct: 246 ASSDSTLKI 254
Score = 288 (106.4 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 69/237 (29%), Positives = 105/237 (44%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ F H V C++ S+ +L + D V LW + HT + S
Sbjct: 52 RAYR---FTGHKDAVTCVQFS-PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRS 107
Query: 65 VSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V F D +L A+ S IKLW + KI+ TL H + F P G+ S S D
Sbjct: 108 VCFSADGQSLLTASDDQS--IKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDD 165
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+K+WD + IHT+ + + F P + + DNTV++WD+ LL ++
Sbjct: 166 RTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQ 225
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG 239
H + + FHP L T S+D T+K DL L+ + C++F+ G
Sbjct: 226 VHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSG 282
Score = 284 (105.0 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 56/201 (27%), Positives = 97/201 (48%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F AH+ +V + + L+T +D + LW++ + I +L H + + F
Sbjct: 98 FRAHTGSVRSVCFSA-DGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDG 156
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
L+ + + T+KLWD +++ T VDFHP A+ S D +++WDIR
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIR 216
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
+ Y+ H+ VNA+ F P G +++ D+T+K+ DL G+LL+ H+G C+
Sbjct: 217 THTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCV 276
Query: 192 DFHPHEFLLATGSADRTVKFW 212
F A+ +D+ V W
Sbjct: 277 SFSRSGDQFASAGSDQQVMVW 297
Score = 262 (97.3 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 60/218 (27%), Positives = 103/218 (47%)
Query: 45 AIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC 104
A+ P + GH I S+ F S +A+G+ ++ +W+++ TGH+
Sbjct: 4 ALDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAV 63
Query: 105 ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGED 164
V F P AS S D +++W KG ++ HT V ++ F+ DG+ +++ +D
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDD 123
Query: 165 NTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAG 224
++KLW + K++ + H ++C F P L+ + S DRTVK WD + +LI +
Sbjct: 124 QSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFC 183
Query: 225 PETSGVRC-LTFNPDGRTLLCGLHESLKVFSWEPIRCH 261
E G + F+P T + V W+ IR H
Sbjct: 184 -EPGGYSSYVDFHPSS-TCIATASSDNTVRVWD-IRTH 218
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 354 (129.7 bits), Expect = 5.8e-30, P = 5.8e-30
Identities = 84/265 (31%), Positives = 134/265 (50%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF--------DSSEVLVAAGAA 79
+S++LVT LW + I +L GH + + ++SF + S+V +A+ AA
Sbjct: 227 NSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAA 286
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + + + GH V +HP G F + D + ++WD+ + I
Sbjct: 287 DGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQ 346
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH++GV+ + F PDG +GG D+ ++WDL G+ + + H +I I+F P+ F
Sbjct: 347 EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFH 406
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D K WDL I + + V + F P DG LL G +++ W
Sbjct: 407 VATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKI-WT-- 463
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 464 --HP----GWSPLKTLAGHEGKVMG 482
Score = 316 (116.3 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 65/186 (34%), Positives = 93/186 (50%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T DH LW + IL GH+ G+ + F L G ++WD
Sbjct: 319 SGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWD 378
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + V L GH S++F P G A+GS D K+WD+R++ CI+T H V+
Sbjct: 379 LRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVS 438
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
+++F P DG ++++G DNT K+W L HEG++ +D P L+AT S D
Sbjct: 439 SVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYD 498
Query: 207 RTVKFW 212
RT K W
Sbjct: 499 RTFKLW 504
Score = 288 (106.4 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 58/221 (26%), Positives = 104/221 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D V LW++ I + GH+ + V++ S + + +LWDLE + +
Sbjct: 287 DGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQ 346
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
GH + FHP G +G LD+ ++WD+R C+ +GH + + +I F+P+G
Sbjct: 347 EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFH 406
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHE-FLLATGSADRTVKFWDLET 216
V +G DN K+WDL + ++ H+ + + F P++ L TG+ D T K W
Sbjct: 407 VATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPG 466
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
+ + + V + +PDG+ + C + K++ E
Sbjct: 467 WSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWMSE 507
Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 70/264 (26%), Positives = 114/264 (43%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y L V K +S+R + E HK NL + N S G I
Sbjct: 169 YSLPRAVKRLDAARAQKEIPESTRT-IKQQELHK-NLRNV---NNFCSQIGDDRPISYCQ 223
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF--------FAS 118
F + L+ + SG KLW + + ++RTL GH +N ++ FHP AS
Sbjct: 224 FSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMAS 283
Query: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK-L 177
+ D ++K+W + I +GH+ V + + P GR++ + D++ +LWDL + +
Sbjct: 284 CAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI 343
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP 237
LH + H + + FHP L TG D + WDL T + + + F+P
Sbjct: 344 LHQ-EGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSP 402
Query: 238 DGRTLLCGLHESL-KVFSWEPIRC 260
+G + G ++ KV+ RC
Sbjct: 403 NGFHVATGSGDNACKVWDLRQRRC 426
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 352 (129.0 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 85/290 (29%), Positives = 135/290 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + ++ VTG D + +W + LSL+GH S + V
Sbjct: 193 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ S L + G +K WDLE K++R GH S +D HP + + S D+
Sbjct: 252 IVSTRSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 310
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+IWD+R K +HT GHT V +R +++G D T++LWDL AGK H
Sbjct: 311 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 370
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ ++ + HP + A+GS D +K W I + + + LT N DG L+
Sbjct: 371 KKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVS 428
Query: 245 GLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C+++QS
Sbjct: 429 GADNGTMHLWDWRTGYNFQRVHAAVQPG-----SLDSESG-IFACAFDQS 472
Score = 242 (90.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 66/213 (30%), Positives = 99/213 (46%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + VLVT D +W + ++ +LSGHT+ + +V
Sbjct: 280 IRHYHGHLSAVYGLDL-HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 338
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++E + G+ TI+LWDL K TLT H+ + +V HP FASGS D N+K W
Sbjct: 339 AAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQW 397
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLH------ 179
I GH +N + DG +VSG ++ T+ LWD G + +H
Sbjct: 398 KFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPG 456
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
G C F E L T AD+T+K +
Sbjct: 457 SLDSESGIFACA-FDQSESRLLTAEADKTIKVY 488
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 352 (129.0 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 85/290 (29%), Positives = 135/290 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + ++ VTG D + +W + LSL+GH S + V
Sbjct: 194 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ S L + G +K WDLE K++R GH S +D HP + + S D+
Sbjct: 253 IVSTRSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 311
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+IWD+R K +HT GHT V +R +++G D T++LWDL AGK H
Sbjct: 312 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 371
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ ++ + HP + A+GS D +K W I + + + LT N DG L+
Sbjct: 372 KKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVS 429
Query: 245 GLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C+++QS
Sbjct: 430 GADNGTMHLWDWRTGYNFQRVHAAVQPG-----SLDSESG-IFACAFDQS 473
Score = 242 (90.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 66/213 (30%), Positives = 99/213 (46%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + VLVT D +W + ++ +LSGHT+ + +V
Sbjct: 281 IRHYHGHLSAVYGLDL-HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 339
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++E + G+ TI+LWDL K TLT H+ + +V HP FASGS D N+K W
Sbjct: 340 AAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQW 398
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLH------ 179
I GH +N + DG +VSG ++ T+ LWD G + +H
Sbjct: 399 KFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPG 457
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
G C F E L T AD+T+K +
Sbjct: 458 SLDSESGIFACA-FDQSESRLLTAEADKTIKVY 489
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 352 (129.0 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 85/290 (29%), Positives = 135/290 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + ++ VTG D + +W + LSL+GH S + V
Sbjct: 195 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 253
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ S L + G +K WDLE K++R GH S +D HP + + S D+
Sbjct: 254 IVSTRSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 312
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+IWD+R K +HT GHT V +R +++G D T++LWDL AGK H
Sbjct: 313 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 372
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ ++ + HP + A+GS D +K W I + + + LT N DG L+
Sbjct: 373 KKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNSDG-VLVS 430
Query: 245 GLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C+++QS
Sbjct: 431 GADNGTMHLWDWRTGYNFQRVHAAVQPG-----SLDSESG-IFACAFDQS 474
Score = 242 (90.2 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 66/213 (30%), Positives = 99/213 (46%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + VLVT D +W + ++ +LSGHT+ + +V
Sbjct: 282 IRHYHGHLSAVYGLDL-HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 340
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++E + G+ TI+LWDL K TLT H+ + +V HP FASGS D N+K W
Sbjct: 341 AAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQW 399
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLH------ 179
I GH +N + DG +VSG ++ T+ LWD G + +H
Sbjct: 400 KFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPG 458
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
G C F E L T AD+T+K +
Sbjct: 459 SLDSESGIFACA-FDQSESRLLTAEADKTIKVY 490
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 347 (127.2 bits), Expect = 2.3e-29, P = 2.3e-29
Identities = 72/244 (29%), Positives = 122/244 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H ++C +++ L TG D + +W + GHT I V+F
Sbjct: 12 RHFKGHKDVISCADFN-PNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP 70
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
S LVA+ + T++LW H ++ SV F G+ + S D ++K+W
Sbjct: 71 SGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWG 130
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
+ +K +++ HT V RF+PDGR + S G+D TV+LWD ++ + ++ F + G
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 190 CIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES 249
+DF+ +A+ AD T+K WD+ T +LI +GV C +F+P G L+ G +S
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDS 250
Query: 250 -LKV 252
+K+
Sbjct: 251 TIKI 254
Score = 331 (121.6 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 66/201 (32%), Positives = 101/201 (50%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F AH+++V + R R LVT +D V +W + + + SL+ HT+ + F
Sbjct: 98 FKAHTASVRSVHFSRDGQR-LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDG 156
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
L+A+ T++LWD + + T + + VDF+ G AS D +KIWDIR
Sbjct: 157 RLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I YK H GVN F P G +++SG D+T+K+ DL G+L++ H+G + +
Sbjct: 217 TNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTV 276
Query: 192 DFHPHEFLLATGSADRTVKFW 212
F L A+G AD V W
Sbjct: 277 TFSRDGDLFASGGADSQVLMW 297
Score = 265 (98.3 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 63/223 (28%), Positives = 105/223 (47%)
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
+E+ + R GH+ DF+P + A+GS D +L IW++ K + GHT +
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVIT 64
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
+ F P G V S D TV+LW + FK H ++ + F L T S D+
Sbjct: 65 GVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDK 124
Query: 208 TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRCHDA-VD 265
+VK W +E + + S T+ VRC F+PDGR + CG +++++ +C + D
Sbjct: 125 SVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTD 184
Query: 266 VGWSR-LSDLNVHEGKLLGCSYNQSCVGVWVVDISR-IEPYTI 306
G S D N G + S + + +W + ++ I+ Y +
Sbjct: 185 YGGSATFVDFN-SSGTCIASSGADNTIKIWDIRTNKLIQHYKV 226
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 348 (127.6 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 86/290 (29%), Positives = 134/290 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + ++ VTG D + +W + LSL+GH S + V
Sbjct: 196 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 254
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ S L + G +K WDLE K++R GH S +D HP + + S D+
Sbjct: 255 IVSARSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 313
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+IWD+R K +HT GHT V ++ VV+G D T++LWDL AGK H
Sbjct: 314 ARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNH 373
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ ++ + HP + A+GS D +K W I + + + LT N DG L+
Sbjct: 374 KKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTLTVNSDG-VLVS 431
Query: 245 GLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C ++QS
Sbjct: 432 GADNGTMHLWDWRTGYNFQRVHAAVQPG-----SLDSESG-IFACVFDQS 475
Score = 213 (80.0 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 66/272 (24%), Positives = 113/272 (41%)
Query: 8 KLQ-EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
KL+ H STV + + +S L + GED +V W + I GH S + +
Sbjct: 239 KLKLSLTGHISTVRGVIVSARSP-YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD 297
Query: 67 FDSS-EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ +VLV S T ++WD+ V TL+GH + +V +GS DT +
Sbjct: 298 LHPTIDVLVTCSRDS-TARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTI 356
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WD+ T H + V A+ P SG DN +K W G + + H
Sbjct: 357 RLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDGNFIQNLSGHN 415
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLET---FELI------GSAGPETSGVRCLTFN 236
I + + + +L +G+ + T+ WD T F+ + GS E+ C+
Sbjct: 416 AIINTLTVNS-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQ 474
Query: 237 PDGRTLLCGLHESLKVFSWEPIRCHDAVDVGW 268
+ R L +++KV+ + + + W
Sbjct: 475 SESRLLTAEADKTIKVYKEDDTATEETHPISW 506
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 332 (121.9 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 71/245 (28%), Positives = 118/245 (48%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H V C+ + L +G D + +W + + +GH + V+F
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L+A+G+ T+++W + K T+ H + SV F G+ + S D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
++ + + H V +F+PDGR +VS +D TVKLWD T+ + +H + H G +
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+DFHP +A D TVK WD T L+ ++ V L+F+P G L+ +
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 249 S-LKV 252
S LK+
Sbjct: 251 STLKI 255
Score = 318 (117.0 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 78/267 (29%), Positives = 117/267 (43%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ F H V C+ S +L +G D V +W HT+ + S
Sbjct: 53 RAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F S L+ + T+K+W + + +LT H + F P G S S D
Sbjct: 109 VHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+K+WD + C+H+Y H V + F P G + + G DNTVK+WD +L+ ++ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLH 228
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI----GSAGPETSGVRCLTFNPDGR 240
+ + FHP L T S+D T+K DL L+ G GP T+ + F+ G
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT----VAFSRTGE 284
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVG 267
G + +V W+ D VD G
Sbjct: 285 YFASGGSDE-QVMVWKSN--FDTVDYG 308
Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 63/217 (29%), Positives = 101/217 (46%)
Query: 49 PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
P+ GH + V F + +A+G+ T+ +W ++ TGH+ V+
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F P G ASGS D ++IW KG ++ HT V ++ F DG+ +V+ +D TVK
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+W + L H ++C F P L+ + S D+TVK WD + E + S
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 229 GVRCLTFNPDGRTLLC-GLHESLKVFSWEPIRCHDAV 264
V + F+P G + G+ ++KV W+ R H V
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKV--WDT-RTHRLV 222
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 65/232 (28%), Positives = 106/232 (45%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR VDF + ASGS+D+ L IW ++ + + + GH V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+P G + SG D TV++W F+ H ++ + F LL T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDV 266
VK W + S + VRC F+PDGR ++ + ++K++ C H +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 267 GWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISR-IEPYTIGSVTRVNGLS 316
G ++ ++ H G + + + V VW R ++ Y + S VN LS
Sbjct: 187 G-GFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAA-VNALS 236
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 332 (121.9 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 94/327 (28%), Positives = 149/327 (45%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H V C+ + L +G D + +W + + +GH + V+F
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 102
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L+A+G+ T+++W + K T+ H + SV F G+ F + S D +K+W
Sbjct: 103 SGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
++ + + H V +F+PDGR +VS +D TVKLWD T+ + +H + H G +
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+DFHP +A D TVK WD+ T L+ ++ V L+F+P G L+ +
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Query: 249 S-LKVFSWEPIRC------HD--AVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDIS 299
S LK+ R H A V +SR + G S Q V VW +
Sbjct: 282 STLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG-----SDEQ--VMVWKSNFD 334
Query: 300 RIEPYTIGSVTRVNGLSESKSSASGNL 326
I+ Y G V RV + +S+SG L
Sbjct: 335 VID-Y--GEVLRVQRPPATLASSSGTL 358
Score = 276 (102.2 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 61/214 (28%), Positives = 99/214 (46%)
Query: 49 PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
P+ GH + V F + +A+G+ + +W ++ TGH+ V+
Sbjct: 40 PSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 99
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F P G ASGS D ++IW KG ++ HT V ++ F DG+ V+ +D T+K
Sbjct: 100 FSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 159
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+W K L H ++C F P L+ + S D+TVK WD + E + S
Sbjct: 160 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 219
Query: 229 GVRCLTFNPDGRTLLC-GLHESLKVFSWEPIRCH 261
V + F+P G + G+ ++KV W+ +R H
Sbjct: 220 FVTYVDFHPSGTCVAAAGMDNTVKV--WD-VRTH 250
Score = 237 (88.5 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 62/232 (26%), Positives = 106/232 (45%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR VDF + ASGS+D+ L +W ++ + + + GH V
Sbjct: 38 EDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 97
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+P G + SG D TV++W F+ H ++ + F T S D+T
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 157
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDV 266
+K W + + S + VRC F+PDGR ++ + ++K++ C H +
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 217
Query: 267 GWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLS 316
G ++ ++ H G + + + V VW V R+ + Y + S VN LS
Sbjct: 218 G-GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAA-VNALS 267
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 331 (121.6 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 63/200 (31%), Positives = 103/200 (51%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H +++ +K + L + D + +W +L GH GI +++ L+
Sbjct: 45 HLKSISSVKFS-PDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLI 103
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+WD+E K+V+TL GH+ V F+P SGS D N++IWD+
Sbjct: 104 CSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGE 163
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG-QIQCIDF 193
C H+ V + F DG VVSG D TV++WD T G+LL+ +G ++ + F
Sbjct: 164 CTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKF 223
Query: 194 HPH-EFLLATGSADRTVKFW 212
P+ +F+LA G+ D T++ W
Sbjct: 224 SPNGKFVLA-GTLDNTLRLW 242
Score = 310 (114.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 67/211 (31%), Positives = 105/211 (49%)
Query: 49 PNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS 106
PN IL +L GH I SV F +A+ +A TIK+W + K RTL GH+
Sbjct: 34 PNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISD 93
Query: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNT 166
+ + + S S D +KIWD+ + T KGH V + F P +VSG D
Sbjct: 94 IAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDEN 153
Query: 167 VKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE 226
V++WD+ G+ H + + F+ L+ +GS D TV+ WD T +L+ + E
Sbjct: 154 VRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTE 213
Query: 227 TSG-VRCLTFNPDGRTLLCG-LHESLKVFSW 255
V + F+P+G+ +L G L +L+++S+
Sbjct: 214 DGKEVSFVKFSPNGKFVLAGTLDNTLRLWSY 244
Score = 285 (105.4 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 57/191 (29%), Positives = 100/191 (52%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S ++V+G D V +W + +S H+ + V F+ LV +G+ GT+++WD
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDT 201
Query: 89 EEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGV 146
+++ T++ +S V F P G+F +G+LD L++W K C+ TY GH
Sbjct: 202 TTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEK 261
Query: 147 NAIRFTPD---GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATG 203
I T G+W+V+G EDN + +++L +++ HE + + HP E ++A+G
Sbjct: 262 YCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Query: 204 SA--DRTVKFW 212
+ DR+VK W
Sbjct: 322 ALEKDRSVKIW 332
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 330 (121.2 bits), Expect = 8.3e-29, P = 8.3e-29
Identities = 71/245 (28%), Positives = 118/245 (48%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H V C+ + L +G D + +W + + +GH + V+F
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L+A+G+ T+++W + K T+ H + SV F G+ + S D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
++ + + H V +F+PDGR +VS +D TVKLWD T+ + +H + H G +
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+DFHP +A D TVK WD T L+ ++ V L+F+P G L+ +
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 249 S-LKV 252
S LK+
Sbjct: 251 STLKI 255
Score = 315 (115.9 bits), Expect = 3.4e-27, P = 3.4e-27
Identities = 79/267 (29%), Positives = 116/267 (43%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ F H V C+ S +L +G D V +W HT+ + S
Sbjct: 53 RAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F S + + T+K+W + + +LT H + F P G S S D
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+K+WD + CIH+Y H V + F P G + + G DNTVK+WD +LL ++ H
Sbjct: 169 VKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLH 228
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI----GSAGPETSGVRCLTFNPDGR 240
+ + FHP L T S+D T+K DL L+ G GP T+ + F+ G
Sbjct: 229 SAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT----VAFSRTGE 284
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVG 267
G + +V W+ D VD G
Sbjct: 285 YFASGGSDE-QVMVWKSN--FDIVDYG 308
Score = 281 (104.0 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 63/214 (29%), Positives = 100/214 (46%)
Query: 49 PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
P+ GH + V F + +A+G+ T+ +W ++ TGH+ V+
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F P G ASGS D ++IW KG ++ HT V ++ F DG+ +V+ +D TVK
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+W + L H ++C F P L+ + S D+TVK WD + E I S
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGG 188
Query: 229 GVRCLTFNPDGRTLLC-GLHESLKVFSWEPIRCH 261
V + F+P G + G+ ++KV W+ R H
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKV--WDA-RTH 219
Score = 252 (93.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 98/405 (24%), Positives = 174/405 (42%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR VDF + ASGS+D+ L IW ++ + + + GH V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+P G + SG D TV++W F+ H ++ + F L T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDV 266
VK W + S + VRC F+PDGR ++ + ++K++ C H +
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEH 186
Query: 267 GWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKS---- 320
G ++ ++ H G + + + V VW R+ + Y + S VN LS S
Sbjct: 187 G-GFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAA-VNALSFHPSGNYL 244
Query: 321 ---SASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLG 377
S+ L +L+ + L L Q V +++ G S SD + K+
Sbjct: 245 ITASSDSTLKILDLMEGRL-LYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVWKSNF 302
Query: 378 RLSVSQNSEPAKESKVLSSTGSVPG----TPQRVNLNMGS-KTSVVNSTAVVSKRTSTRA 432
+ + + + + SS+G++P P + ++ S + S ++ TST
Sbjct: 303 DIVDYGDMKARRPPPLTSSSGTLPKMDLPVPPGRDRSLESVQGEPQESISMPQTLTSTLE 362
Query: 433 NTASNVPILNKS-DIVPVIVPRTNTRFEQAVESRKDIDVIGRTMP 476
+ + IL ++ I+ + T R +Q +E+++ I + RT P
Sbjct: 363 HIVGQLDILTQTVSILEQRLTLTEDRLKQCLENQQLI--MQRTPP 405
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 284 (105.0 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 60/194 (30%), Positives = 98/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT ++ +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 65/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H ++ I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVEDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 329 (120.9 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 72/245 (29%), Positives = 120/245 (48%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H + + + + L +G D + +W + + +GH + V+F
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQ-LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP 71
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L+A+G+ T+++W + K T+ H + SV F G+ + S D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
++ + + H V RF+PDGR +VS +D TVKLWD T+ + +H + H G +
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+DFHP +A S D TVK WD+ T L+ ++ V L+F+P G LL +
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSD 250
Query: 249 S-LKV 252
S LK+
Sbjct: 251 STLKI 255
Score = 303 (111.7 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 73/256 (28%), Positives = 112/256 (43%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ F H V C+ S +L +G D V +W HT+ + S
Sbjct: 53 RAYR---FAGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRS 108
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F S + + T+K+W K + +L+ H + F P G S S D
Sbjct: 109 VHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKT 168
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+K+WD + C+H+Y H V + F P G + + DNTVK+WD+ +LL ++ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH 228
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI----GSAGPETSGVRCLTFNPDGR 240
+ + FHP L T S+D T+K DL L+ G GP T+ + F+ G
Sbjct: 229 SAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATT----VAFSRTGE 284
Query: 241 TLLCGLHESLKVFSWE 256
G + +V W+
Sbjct: 285 YFASGGSDE-QVMVWK 299
Score = 302 (111.4 bits), Expect = 8.5e-26, P = 8.5e-26
Identities = 62/209 (29%), Positives = 104/209 (49%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F AH++TV + + LVT +D V +W+ + + SLS H + + F
Sbjct: 99 FRAHTATVRSVHFC-SDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDG 157
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
L+ + + T+KLWD + V + H VDFHP G A+ S+D +K+WD+R
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
+ Y+ H+ VNA+ F P G ++++ D+T+K+ DL G+LL+ H+G +
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTV 277
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F A+G +D V W F+++
Sbjct: 278 AFSRTGEYFASGGSDEQVMVWK-SNFDVV 305
Score = 276 (102.2 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 62/214 (28%), Positives = 99/214 (46%)
Query: 49 PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
P+ GH I SV F + +A+G+ + +W ++ GH+ V+
Sbjct: 9 PSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVN 68
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F P G ASGS D ++IW KG ++ HT V ++ F DG+ +V+ +D TVK
Sbjct: 69 FSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+W K L H ++C F P L+ + S D+TVK WD + E + S
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 229 GVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCH 261
V + F+P G + + ++KV W+ +R H
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKV--WD-VRTH 219
Score = 254 (94.5 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 102/409 (24%), Positives = 178/409 (43%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR SVDF + ASGS+D+ L +W ++ + + + GH V
Sbjct: 7 EDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTC 66
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+P G + SG D TV++W F+ H ++ + F L T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDV 266
VK W + + S + VRC F+PDGR ++ + ++K++ C H +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 267 GWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKSSASG 324
G ++ ++ H G + + + V VW V R+ + Y + S VN LS SG
Sbjct: 187 G-GFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAA-VNALS---FHPSG 241
Query: 325 N--LSVLNENSAKA-SL--GKL--SVSQNSDPLVKETKS-LGRLSVSQNSDPLLKETKTL 376
N L+ ++++ K L G+L ++ + P S G S SD + K+
Sbjct: 242 NYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS- 300
Query: 377 GRLSVSQNSEPAKESKV---LSSTGSVPGTPQRVNLNMGSKTSVVNST-----AVVSKRT 428
V E K + L+++G++P V G V S ++ T
Sbjct: 301 -NFDVVDYREVIKVHRPPAPLATSGNLPEVDFPVPPGGGRSQESVQSQLQEPISMPQTLT 359
Query: 429 STRANTASNVPILNKS-DIVPVIVPRTNTRFEQAVESRKDIDVIGRTMP 476
ST + + +L ++ I+ + T + +Q +E+++ I + RT P
Sbjct: 360 STLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLI--MQRTTP 406
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 328 (120.5 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 92/327 (28%), Positives = 149/327 (45%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H V + + + L +G D + +W + +GH + V+F
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQ-LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L+A+G+ T+++W + K T+ H + SV F G+ F + S D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
++ + + H V +F+PDGR +VS +D TVKLWD T+ + +H + H G +
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+DFHP +A D TVK WD+ T L+ ++ V L+F+P G L+ +
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Query: 249 S-LKVFSWEPIRC------HD--AVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDIS 299
S LK+ R H A V +SR + G S Q V VW +
Sbjct: 251 STLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG-----SDEQ--VMVWKSNFD 303
Query: 300 RIEPYTIGSVTRVNGLSESKSSASGNL 326
++ Y G V RV +++S+SG L
Sbjct: 304 IVD-Y--GEVLRVQRPPATRASSSGTL 327
Score = 283 (104.7 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 94/363 (25%), Positives = 155/363 (42%)
Query: 49 PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
P+ GH + SV F + +A+G+ + +W ++ GH+ V+
Sbjct: 9 PSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVN 68
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F P G ASGS D ++IW KG ++ HT V ++ F DG+ V+ +D TVK
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+W K L H ++C F P L+ + S D+TVK WD + E + S
Sbjct: 129 VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 229 GVRCLTFNPDGRTLLC-GLHESLKVFSWEPIRCHDAVD---VGWSRLSDLNVH-EGKLLG 283
V + F+P G + G+ ++KV W+ +R H + + + ++ L+ H G L
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKV--WD-VRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 284 CSYNQSCVGVWVVDISRIEPYTI----GSVTRVNGLSESKSSASGN----LSVLNENSAK 335
+ + S + + + R+ YT+ G T V + ASG + V N
Sbjct: 246 TASSDSTLKILDLMEGRLL-YTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDI 304
Query: 336 ASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNS-EPAKESKVL 394
G++ Q P S G L DPL+ + + S+ +S EP + L
Sbjct: 305 VDYGEVLRVQR--PPATRASSSGTLP---EVDPLVPPGRGRSQESMQSHSQEPVSVPQSL 359
Query: 395 SST 397
+ST
Sbjct: 360 TST 362
Score = 249 (92.7 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 98/409 (23%), Positives = 172/409 (42%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR SVDF + ASGS+D+ L +W ++ + + + GH V
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+P G + SG D TV++W F+ H ++ + F T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDV 266
VK W + + S + VRC F+PDGR ++ + ++K++ C H +
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 267 GWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKS---- 320
G ++ ++ H G + + + V VW V R+ + Y + S VN LS S
Sbjct: 187 G-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA-VNALSFHPSGNYL 244
Query: 321 ---SASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLG 377
S+ L +L+ + L L Q V +++ G S SD + K+
Sbjct: 245 VTASSDSTLKILDLMEGRL-LYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVWKS-- 300
Query: 378 RLSVSQNSEPAKESKV----LSSTGSVPGTPQRVNLNMGSKTSVVNS-----TAVVSKRT 428
+ E + + SS+G++P V G + S +V T
Sbjct: 301 NFDIVDYGEVLRVQRPPATRASSSGTLPEVDPLVPPGRGRSQESMQSHSQEPVSVPQSLT 360
Query: 429 STRANTASNVPILNKS-DIVPVIVPRTNTRFEQAVESRKDIDVIGRTMP 476
ST + + +L ++ I+ + T + +Q +E+++ I + RT P
Sbjct: 361 STLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLI--MQRTTP 407
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 282 (104.3 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 212 (79.7 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 326 (119.8 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 71/245 (28%), Positives = 121/245 (49%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H V C+ + + L +G D + +W + + +GH + V+F
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L+A+G+ T+++W + K T+ H + SV F G+ F + S D +K+W
Sbjct: 72 SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
++ + + H V +F+PDGR +VS +D TVKLWD ++ + +H + H G +
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+DFHP +A D TVK WD+ T L+ ++ V L+F+P G L+ +
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Query: 249 S-LKV 252
S LK+
Sbjct: 251 STLKI 255
Score = 306 (112.8 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 78/267 (29%), Positives = 116/267 (43%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ F H V C+ S +L +G D V +W HT+ + S
Sbjct: 53 RAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 108
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F S + T+K+W K + +L+ H + F P G S S D
Sbjct: 109 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 168
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+K+WD + C+H+Y H V + F P G + + G DNTVK+WD+ +LL ++ H
Sbjct: 169 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI----GSAGPETSGVRCLTFNPDGR 240
+ + FHP L T S+D T+K DL L+ G GP T+ + F+ G
Sbjct: 229 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT----VAFSRTGE 284
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVG 267
G + +V W+ D VD G
Sbjct: 285 YFASGGSDE-QVMVWKSN--FDIVDHG 308
Score = 279 (103.3 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 62/214 (28%), Positives = 99/214 (46%)
Query: 49 PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
P+ GH + V F + +A+G+ + +W ++ TGH+ V+
Sbjct: 9 PSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVN 68
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F P G ASGS D ++IW KG ++ HT V ++ F DG+ V+ +D TVK
Sbjct: 69 FSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+W K L H ++C F P L+ + S D+TVK WD + E + S
Sbjct: 129 VWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
Query: 229 GVRCLTFNPDGRTLLC-GLHESLKVFSWEPIRCH 261
V + F+P G + G+ ++KV W+ +R H
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKV--WD-VRTH 219
Score = 257 (95.5 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 96/399 (24%), Positives = 168/399 (42%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR VDF + ASGS+D+ L +W ++ + + + GH V
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+P G + SG D TV++W F+ H ++ + F T S D+T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDV 266
VK W + + S + VRC F+PDGR ++ + ++K++ C H +
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Query: 267 GWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKS---- 320
G ++ ++ H G + + + V VW V R+ + Y + S VNGLS S
Sbjct: 187 G-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA-VNGLSFHPSGNYL 244
Query: 321 ---SASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETKTLG 377
S+ L +L+ + L L Q V +++ G S SD + K+
Sbjct: 245 ITASSDSTLKILDLMEGRL-LYTLHGHQGPATTVAFSRT-GEYFASGGSDEQVMVWKS-- 300
Query: 378 RLSVSQNSE----PAKESKVLSSTGSVPGTPQRVNLNMGSKTSVVNS-----TAVVSKRT 428
+ + E P + + SS G++P V G V S +V T
Sbjct: 301 NFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGRGRSVESVQSQPQEPVSVPQTLT 360
Query: 429 STRANTASNVPILNKS-DIVPVIVPRTNTRFEQAVESRK 466
ST + + +L ++ I+ + T + +Q +E+++
Sbjct: 361 STLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQ 399
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 325 (119.5 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 74/251 (29%), Positives = 112/251 (44%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ +V H V ++ + +L + D V LW K HT+ + S
Sbjct: 10 RAYR---YVGHKDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 65
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + +A + +IK+W + + + +L H F P G S S D
Sbjct: 66 VDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 125
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F P G + S G D TVK+WD+ KLL ++ H
Sbjct: 126 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 185
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
G + CI FHP L T S+D T+K DL LI + T V ++F+ G
Sbjct: 186 SGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 245
Query: 245 GLHESLKVFSW 255
G ++ +V W
Sbjct: 246 GGADT-QVLLW 255
Score = 299 (110.3 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 65/216 (30%), Positives = 102/216 (47%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
KR K EF AH++ V + + L T ED + +W++ + + SL HT +
Sbjct: 49 KRG-KFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 106
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
F L+ + + TIK+WD + V + VDF+P G AS D
Sbjct: 107 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 166
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+K+WD+R + Y+ H+ GVN I F P G ++++ D T+K+ DL G+L++ +
Sbjct: 167 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 226
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFEL 219
H G + + F L A+G AD V W EL
Sbjct: 227 HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 262
Score = 242 (90.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/174 (28%), Positives = 87/174 (50%)
Query: 85 LWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
LW+ + A+ R + GH+ SV F P G AS S D +++W K+G +K HT
Sbjct: 2 LWNFKPHARAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 144 RGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATG 203
V ++ F+ DG+++ + ED ++K+W + + L+ H ++C F P L+ +
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSC 120
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
S D+T+K WD + + + + FNP G + G +++KV W+
Sbjct: 121 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKV--WD 172
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 354 (129.7 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 91/315 (28%), Positives = 138/315 (43%)
Query: 11 EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSS 70
+F H V + SR+L + D V +W +L GH + SV F
Sbjct: 258 QFKGHDRAVGSVSFSH-DSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD 316
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
L+A+ + GT+K+WD + R L GH + SV F ASGS D ++IW+
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
HT++ H V A+ F D R + S + VK+WD G L + + H+ +
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESL 250
+ F P LLA+ S DRTVK W T L + VR + F+ D R L+ + +
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR-LIASASDDM 495
Query: 251 KVFSWE----PIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTI 306
V W+ P++ + W R S + H+ +LL + + V +W +E
Sbjct: 496 TVKIWDTATVPLQNNLESHDNWVR-SVVFSHDSRLLASASDDMTVKIWDTATGSLENTLE 554
Query: 307 GSVTRVNGLSESKSS 321
G RVN +S S S
Sbjct: 555 GHDDRVNSVSFSPDS 569
Score = 309 (113.8 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 83/319 (26%), Positives = 138/319 (43%)
Query: 9 LQEFV-AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
LQ + H+ +V + SR++ +G D V +W + H + +VSF
Sbjct: 339 LQRMLKGHNDSVRSVVFSH-DSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSF 397
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNLK 126
+A+ + G +K+WD + L GH +C+ SV F P AS S D +K
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH-DDCVNSVSFSPDSRLLASASDDRTVK 456
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
IW T +GH V ++ F+ D R + S +D TVK+WD L ++ + H+
Sbjct: 457 IWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDN 516
Query: 187 QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL 246
++ + F LLA+ S D TVK WD T L + V ++F+PD R L
Sbjct: 517 WVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASAS 576
Query: 247 HE-SLKVFSWEPIRCHDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPY 304
+ ++K++ D G +S H LL + + V +W ++I + +
Sbjct: 577 DDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLR-H 635
Query: 305 TIGSVTRVNGLSESKSSAS 323
T + + KS +S
Sbjct: 636 TFDLDHEIQRIQFDKSMSS 654
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 279 (103.3 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 59/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD + L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S S D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 211 (79.3 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 193 (73.0 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 35/101 (34%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WDI C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSTISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 177 (67.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 66/247 (26%), Positives = 100/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ +S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 165 (63.1 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W I +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 145 (56.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 34/143 (23%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + + ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 116 (45.9 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 FKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 280 (103.6 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 36 GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
G+ W I +P +LSGH S + V F ++ + + TIK+WD E R
Sbjct: 86 GQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 144
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
TL GH + + F G+ AS S D +K+WD + CI T GH V+++ P+G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D T+K+W++ G + F H ++ + + L+A+ S D+TV+ W +
Sbjct: 205 DHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264
Query: 216 TFELIGSAGPETSGVRCLTFNPD 238
T E V C+++ P+
Sbjct: 265 TKECKAELREHEHVVECISWAPE 287
Score = 279 (103.3 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 59/194 (30%), Positives = 97/194 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
V+V+ ED + +W + +L GHT + +SFD S L+A+ +A TIKLWD +
Sbjct: 122 VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ +RT+ GH N SV P G+ S + D +K+W+++ C+ T+ GH V +R
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL--LATGSADRT 208
DG + S D TV++W + + + + HE ++CI + P ++ + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSET 301
Query: 209 VKFWDLETFELIGS 222
K F L GS
Sbjct: 302 KKSGKPGPFLLSGS 315
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + + D+T+K W+++T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TL+ C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVW 261
Score = 191 (72.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 34/101 (33%), Positives = 54/101 (53%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + F G++++S +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 45/160 (28%), Positives = 73/160 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNL--WAIGKPNAILSLSGHTSGIDSVSFDSSE 71
++ TV + K + + E H V WA P + S +G ++
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWA---PESSYSSISEATGSETKKSGKPG 308
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ +G+ TIK+WD+ + TL GH + V FH G+F S + D L++WD +
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
K C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 180 (68.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 66/247 (26%), Positives = 101/247 (40%)
Query: 114 EFFASGSLDTNL--KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
EF + G L K W I + + GH V + F P +VS ED T+K+WD
Sbjct: 78 EFTSGGPLGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G K H +Q I F LLA+ SAD T+K WD + FE I + V
Sbjct: 137 YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYN 287
+ P+G ++ + ++K++ + C G W R+ N +G L+ N
Sbjct: 197 SVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPN-QDGTLIASCSN 254
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKAS--LGKLSVSQ 345
V VWVV + V +S + S+ ++S + K S G +S
Sbjct: 255 DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314
Query: 346 NSDPLVK 352
+ D +K
Sbjct: 315 SRDKTIK 321
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V F S + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 151 (58.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +V + S ++L + D + LW I ++ GH + SV+ + +
Sbjct: 149 HTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI 207
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ A TIK+W+++ V+T TGHR V + G AS S D +++W + K
Sbjct: 208 VSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267
Query: 135 CIHTYKGHTRGVNAIRFTPDGRW 157
C + H V I + P+ +
Sbjct: 268 CKAELREHEHVVECISWAPESSY 290
Score = 114 (45.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 27/104 (25%), Positives = 54/104 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWD 213
G +++SG D T+K+WD++ G L H+ ++ + FH +F+L+ D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD-DKTLRVWD 366
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 367 YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV--WE 408
Score = 98 (39.6 bits), Expect = 5.1e-28, Sum P(2) = 5.1e-28
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVF 253
P FLL+ GS D+T+K WD+ T + + + VR + F+ G+ +L C ++L+V+
Sbjct: 307 PGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
++ RC ++ ++ L+ H+ ++ S +Q+ V VW
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKVW 407
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 338 (124.0 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 83/290 (28%), Positives = 134/290 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + ++ VTG D + +W + LSL+GH S + V
Sbjct: 194 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 252
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ S L + G +K WDLE K++R GH S +D HP + + S D+
Sbjct: 253 IVSTRSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 311
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+IWD+R K +HT GHT V +R +++G D T++LWDL AGK H
Sbjct: 312 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 371
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ ++ + HP + A+GS D +K W I + + + L N DG L+
Sbjct: 372 KKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAIINTLAVNTDG-VLVS 429
Query: 245 GLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C++++S
Sbjct: 430 GADNGTMHLWDWRTGYNFQRVHAAVQPG-----SLDSESG-IFACAFDRS 473
Score = 250 (93.1 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 67/213 (31%), Positives = 100/213 (46%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + VLVT D +W + ++ +LSGHT+ + +V
Sbjct: 281 IRHYHGHLSAVYGLDL-HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 339
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++E + G+ TI+LWDL K TLT H+ + +V HP FASGS D N+K W
Sbjct: 340 AAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQW 398
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLH------ 179
G I GH +N + DG +VSG ++ T+ LWD G + +H
Sbjct: 399 KFPDGGFIQNLSGHNAIINTLAVNTDGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPG 457
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
G C F E L T AD+T+K +
Sbjct: 458 SLDSESGIFACA-FDRSESRLLTAEADKTIKVY 489
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 321 (118.1 bits), Expect = 7.7e-28, P = 7.7e-28
Identities = 81/287 (28%), Positives = 128/287 (44%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T +L H + V + + TG D LW+ + GHT+ I
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEI 180
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
+SF+ +VA G+ T KLWD++ + V TLTGH + IS+ F G+ +GS D
Sbjct: 181 VCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFD 240
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+ +WD +HT GH +++ F+ D +++G D T LWD T+GK +
Sbjct: 241 HTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLT 300
Query: 183 CHEGQI--QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
H+ +I C D+ L+AT SAD T + ++ T + I + ++FNP G
Sbjct: 301 GHDDEILDSCFDYTGK--LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGN 358
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYN 287
LL G + W+ V G L L H ++ C++N
Sbjct: 359 RLLTGSSDKTARI-WD-------VQTGQC-LQVLEGHTDEIFSCAFN 396
Score = 311 (114.5 bits), Expect = 9.2e-27, P = 9.2e-27
Identities = 68/234 (29%), Positives = 113/234 (48%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H++ + CL +S+ V+ TG D LW I +++L+GH + I S+SFD+S
Sbjct: 173 FRGHTAEIVCLSFNPQST-VVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSG 231
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ G+ T+ +WD + V TL GH + S F +GS+D +WD
Sbjct: 232 DRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDAT 291
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
C+ T GH + F G+ + + D T ++++ T K + + HEG+I I
Sbjct: 292 SGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKI 351
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
F+P L TGS+D+T + WD++T + + T + FN G ++ G
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITG 405
Score = 273 (101.2 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 65/263 (24%), Positives = 121/263 (46%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV-LVAAGAASGTIKL 85
K+ +TG D +W + +L GH + + +++F++ +A G+ T KL
Sbjct: 102 KAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
W E K T GH + + + F+P A+GS+DT K+WDI+ + T GH
Sbjct: 162 WSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAE 221
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
+ ++ F G +++G D+TV +WD + G+ +H H +I F L+ TGS
Sbjct: 222 IISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSM 281
Query: 206 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV 264
D+T WD + + + + + F+ G+ + + + +V++ +C
Sbjct: 282 DKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKC---- 337
Query: 265 DVGWSRLSDLNVHEGKLLGCSYN 287
++ L HEG++ S+N
Sbjct: 338 ------ITKLEGHEGEISKISFN 354
Score = 263 (97.6 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 56/198 (28%), Positives = 91/198 (45%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + L R+ +TG DH V +W + +L GH + I S F L+
Sbjct: 218 HLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLI 276
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G+ T LWD K V TLTGH + F G+ A+ S D ++++ +
Sbjct: 277 LTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRK 336
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
CI +GH ++ I F P G +++G D T ++WD+ G+ L + H +I F+
Sbjct: 337 CITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFN 396
Query: 195 PHEFLLATGSADRTVKFW 212
++ TGS D + + W
Sbjct: 397 YKGNIVITGSKDNSCRIW 414
Score = 255 (94.8 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 55/192 (28%), Positives = 90/192 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFH-PFG 113
L H + +V+ + + G+ T K+WD + + TL GHR+ ++ F+ P+G
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+ A+GS D K+W C HT++GHT + + F P V +G D T KLWD+
Sbjct: 148 DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
+G+ + H +I + F + TGS D TV WD T + + + +
Sbjct: 208 SGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA 267
Query: 234 TFNPDGRTLLCG 245
F+ D +L G
Sbjct: 268 LFSWDCSLILTG 279
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 52/165 (31%), Positives = 81/165 (49%)
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
+ + L H +V + G F +GS D K+WD +HT +GH V AI F
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 153 -PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
P G + +G D T KLW GK H F+ H +I C+ F+P ++ATGS D T K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+++ E + + + + L+F+ G ++ G + V W+
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVV-WD 247
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 321 (118.1 bits), Expect = 7.7e-28, P = 7.7e-28
Identities = 78/297 (26%), Positives = 139/297 (46%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
++ Y + AH + + KS +TG D +W + +L GH + +
Sbjct: 80 RKFYLFRALQAHILPLTNVAFN-KSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVY 138
Query: 64 SVSFDSSEV-LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
+++F++ VA G+ T KLW E K T GH + + + F+P A+GS+D
Sbjct: 139 AIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMD 198
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
T K+WD+ + T GH + ++ F G +V+G D+T LWD+ +G+ +H
Sbjct: 199 TTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS 258
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
H G+I C+ F+ L+AT S D++ K WD E + + + V + FN G+ +
Sbjct: 259 GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLI 318
Query: 243 LCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDL--NVHEGKLLGCSYNQSCVGVWVV 296
+ +VFS + +C ++ +S + N ++L S +++ VW V
Sbjct: 319 ATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTS-RVWCV 374
Score = 296 (109.3 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 75/286 (26%), Positives = 126/286 (44%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T +L H + V + + TG D LW+ + GHT+ I
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEI 180
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
++F+ LVA G+ T KLWD+E + V TL GH + IS+ F+ G+ +GS D
Sbjct: 181 VCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFD 240
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+WD+ +H GH ++ ++F D + + D + K+WD G+ L
Sbjct: 241 HTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLL 300
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG-RT 241
H ++ + F+ L+AT SAD T + + +TF+ + + + FN G R
Sbjct: 301 GHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV 360
Query: 242 LLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYN 287
L + ++ +V W C V G + L L H ++ C++N
Sbjct: 361 LTASVDKTSRV--W----C---VKTG-ACLQVLEGHSDEIFSCAFN 396
Score = 267 (99.0 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 68/210 (32%), Positives = 99/210 (47%)
Query: 84 KLWDLEEAK--IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
K+ +E K + R L H +V F+ G F +GS D KIWD +HT +G
Sbjct: 73 KVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEG 132
Query: 142 HTRGVNAIRFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL 200
H V AI F P G V +G D T KLW GK + F+ H +I C+ F+P L+
Sbjct: 133 HRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLV 192
Query: 201 ATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
ATGS D T K WD+E+ E + + + + L FN G L+ G + + W+
Sbjct: 193 ATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL-WD---- 247
Query: 261 HDAVDVGWSRLSDLNVHEGKLLGCSYNQSC 290
V G ++ L+ H G++ +N C
Sbjct: 248 ---VPSG-RKVHVLSGHRGEISCVQFNWDC 273
Score = 260 (96.6 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 61/234 (26%), Positives = 109/234 (46%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H++ + CL +S+ V TG D LW + + +L+GH + I S+ F+++
Sbjct: 173 FRGHTAEIVCLAFNPQSTLV-ATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTG 231
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ G+ T LWD+ + V L+GHR V F+ A+ SLD + K+WD
Sbjct: 232 DRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAE 291
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
C+ T GH V + F G+ + + D T +++ + L + H+G+I +
Sbjct: 292 GGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKV 351
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
F+ + T S D+T + W ++T + + + FN +G T++ G
Sbjct: 352 CFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITG 405
Score = 230 (86.0 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 54/205 (26%), Positives = 89/205 (43%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
++ H + + L R LVTG DH LW + + LSGH I V F
Sbjct: 211 EVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQF 269
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ L+A + + K+WD E + + TL GH + V F+ G+ A+ S D ++
Sbjct: 270 NWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRV 329
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
+ C+ +GH ++ + F G V++ D T ++W + G L + H +
Sbjct: 330 FSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDE 389
Query: 188 IQCIDFHPHEFLLATGSADRTVKFW 212
I F+ + TGS D T + W
Sbjct: 390 IFSCAFNYEGDTIITGSKDNTCRIW 414
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 320 (117.7 bits), Expect = 9.9e-28, P = 9.9e-28
Identities = 72/245 (29%), Positives = 116/245 (47%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H + + + L +G D + +W++ L GH + V F
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP 72
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTL-TGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S LVA+G+ T+ LW + K T+ H + SV F G+ + S D +K+W
Sbjct: 73 SGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+ ++ + + H V RF+PDGR + S +D TVKLWD T+ + +H F H G
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA 191
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
++FHP +A D+TVK WD+ L+ T+ V L+F+P G L+ ++
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASND 251
Query: 249 S-LKV 252
S LK+
Sbjct: 252 STLKI 256
Score = 314 (115.6 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 59/201 (29%), Positives = 100/201 (49%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F AH++TV + + LVT +D + +W + + + SLS H + + F
Sbjct: 100 FKAHTATVRSVHFS-SDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG 158
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
L+A+ + T+KLWD + + + H V+FHP G A+ D +K+WD+R
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
+ Y+ HT VN++ F P G ++++ D+T+K+ DL G+LL+ H+G C+
Sbjct: 219 MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
Query: 192 DFHPHEFLLATGSADRTVKFW 212
F A+G +D V W
Sbjct: 279 AFSRTGDFFASGGSDEQVMVW 299
Score = 262 (97.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 74/251 (29%), Positives = 113/251 (45%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GHR SVDF + ASGS+D+ LKIW ++ + + GH V
Sbjct: 8 EDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC 67
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
++F+P G V SG D TV LW + FK H ++ + F L T S D+T
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPI--RC-HDAVD 265
+K W + + + S + VRC F+PDGR L+ + V W+ C H +
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGR-LIASASDDKTVKLWDKTSRECIHSFCE 186
Query: 266 VGWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKSSAS 323
G + + H G + + V VW V ++R+ + Y + + VN LS S
Sbjct: 187 HG-GFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA-VNSLS---FHPS 241
Query: 324 GNLSVLNENSA 334
GN + N +
Sbjct: 242 GNYLITASNDS 252
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 335 (123.0 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 83/290 (28%), Positives = 134/290 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + ++ VTG D + +W + LSL+GH S + V
Sbjct: 193 WKLYRVISGHLGWVRCIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 251
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ S L + G +K WDLE K++R GH S +D HP + + S D+
Sbjct: 252 IVSTRSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDST 310
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+IWD+R K +HT GHT V +R +++G D T++LWDL AGK H
Sbjct: 311 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 370
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ ++ + HP + A+GS D +K W I + + + L N DG L+
Sbjct: 371 KKSVRAVVLHPLLYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAIINTLAVNADG-VLVS 428
Query: 245 GLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C++++S
Sbjct: 429 GADNGTMHLWDWRTGYNFQRVHAAVQPG-----SLDSESG-IFACAFDRS 472
Score = 248 (92.4 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 67/213 (31%), Positives = 100/213 (46%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + VLVT D +W + ++ +LSGHT+ + +V
Sbjct: 280 IRHYHGHLSAVYGLDL-HPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQ 338
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++E + G+ TI+LWDL K TLT H+ + +V HP FASGS D N+K W
Sbjct: 339 AAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPD-NIKQW 397
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLH------ 179
G I GH +N + DG +VSG ++ T+ LWD G + +H
Sbjct: 398 KFPDGGFIQNLSGHNAIINTLAVNADGV-LVSGADNGTMHLWDWRTGYNFQRVHAAVQPG 456
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
G C F E L T AD+T+K +
Sbjct: 457 SLDSESGIFACA-FDRSESRLLTAEADKTIKVY 488
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 331 (121.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 73/243 (30%), Positives = 126/243 (51%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGIDSVSFDSS 70
F H + + + + + L TG D + LW++ +P A GH I SV F
Sbjct: 14 FKGHKAAITSVDFS-PNGKQLATGSWDTFLMLWSL-RPQARAFRYVGHKDVITSVQFSPL 71
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
L+A+ + TI+LW ++ H + SVDF G+F AS S D ++K+W++
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM 131
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
++ +++ HT V +F+PDGR +VS ED T+K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF 191
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S 249
+ F+P+ +A+ +D TVK WD+ +L+ + GV C++F+P G L+ + +
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251
Query: 250 LKV 252
LK+
Sbjct: 252 LKI 254
Score = 322 (118.4 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 70/251 (27%), Positives = 116/251 (46%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RA++ +V H + ++ + +L + D + LW K HT+ + S
Sbjct: 52 RAFR---YVGHKDVITSVQFSPLGN-LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRS 107
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + +A+ + +IK+W++ + + +L H F P G S S D
Sbjct: 108 VDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F P+G + S G D+TVK+WD+ KLL ++ H
Sbjct: 168 IKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 227
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
G + C+ FHP L T S+D T+K DL LI + T V ++F+ G
Sbjct: 228 SGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTS 287
Query: 245 GLHESLKVFSW 255
G ++ +V W
Sbjct: 288 GGADA-QVLLW 297
Score = 281 (104.0 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 69/252 (27%), Positives = 127/252 (50%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GH++ SVDF P G+ A+GS DT L +W +R + Y GH + +
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITS 65
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
++F+P G + S D T++LW +FK H ++ +DF LA+ S D++
Sbjct: 66 VQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKS 125
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRC-HDAVD- 265
+K W++ + S T VRC F+PDGR ++ C +++K++ +C ++ D
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDF 185
Query: 266 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTI--GSVTRVN----GLSES 318
VG++ N + G + + + V +W + ++++ + Y + G V V+ G
Sbjct: 186 VGFANFVAFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLI 244
Query: 319 KSSASGNLSVLN 330
+S+ G L +L+
Sbjct: 245 TASSDGTLKILD 256
Score = 277 (102.6 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 63/216 (29%), Positives = 99/216 (45%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
KR K EF AH++ V + + L + ED + +W + + + SL HT +
Sbjct: 91 KRG-KSSEFKAHTAPVRSVDFSA-DGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVR 148
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
F L+ + + TIK+WD + V + V F+P G AS D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDH 208
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+KIWDIR + Y+ H+ GVN + F P G ++++ D T+K+ DL G+L++ +
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFEL 219
H G + + F L +G AD V W EL
Sbjct: 269 HTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDEL 304
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 72/264 (27%), Positives = 114/264 (43%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L H+ V C K R++V+ ED + +W + + S + V+F+
Sbjct: 137 LYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFN 195
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLK 126
+ +A+ + T+K+WD+ K+++ H NC+S FHP G + + S D LK
Sbjct: 196 PNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS--FHPSGNYLITASSDGTLK 253
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW----------DLTAGK 176
I D+ + I+T +GHT V + F+ G SGG D V LW D++
Sbjct: 254 ILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNFDELNYKDVSKRN 313
Query: 177 L--LH-DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET-----FELIGSAGPETS 228
L LH D H I HPHE + T + + DL+T +++ T+
Sbjct: 314 LKRLHFDSPPHLLDIYPRTPHPHEGRIDTVEINPKLDVTDLQTSTPPVVDILSFDSTTTT 373
Query: 229 GVRCLTFNPDGRTLLCG--LHESL 250
T PD +CG L+ SL
Sbjct: 374 ETTVRTL-PDKGEEICGYFLNPSL 396
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 330 (121.2 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 74/251 (29%), Positives = 116/251 (46%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ +V H V L+ + + +L + D V LW + + HT+ + S
Sbjct: 52 RAYR---YVGHKDVVTSLQFSPQGN-LLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRS 107
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + L+ + +IK+W + + + +L H F P G S S D
Sbjct: 108 VDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F P+G + S G D+ VK+WD+ KLL ++ H
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVH 227
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ C+ FHP L T S+D TVK DL LI + T V ++F+ DG L
Sbjct: 228 SCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTS 287
Query: 245 GLHESLKVFSW 255
G ++ +V W
Sbjct: 288 GGADA-QVLIW 297
Score = 312 (114.9 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 66/235 (28%), Positives = 118/235 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGIDSVSFD 68
+ F H + + ++ T D + LW++ KP+A GH + S+ F
Sbjct: 12 RSFKGHKAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFS 69
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
L+A+ + T++LW L+ H + SVDF G+ + S D ++K+W
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+ ++ +++ HT V +F+PDGR +VS ED T+K+WD T + +++F G
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
+DF+P+ +A+ +D VK WD+ +L+ + GV CL+F+P G +L+
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLV 244
Score = 287 (106.1 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 68/233 (29%), Positives = 119/233 (51%)
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
LE+ + R+ GH++ S DF P + A+ S DT L +W ++ + Y GH V
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
+++F+P G + S D TV+LW L +FK H ++ +DF LL T S D+
Sbjct: 65 SLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDK 124
Query: 208 TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRC-HDAVD 265
++K W + + S T VRC F+PDGR ++ C +++K++ +C ++ D
Sbjct: 125 SIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 266 -VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLS 316
VG++ D N + G + + + V +W + ++++ + Y + S VN LS
Sbjct: 185 SVGFANFVDFNPN-GTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG-VNCLS 235
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 330 (121.2 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 72/243 (29%), Positives = 125/243 (51%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGIDSVSFDSS 70
F H + + L + + + L T D + LW KP+A GH + SV F
Sbjct: 14 FKGHKAAITSLDLS-PNGKQLATASWDTFLMLWNF-KPHARAYRYVGHKDVVTSVQFSPH 71
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
L+A+ + T++LW ++ H + SVDF G+F A+ S D ++K+W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
++ +++ HT V +F+PDGR +VS ED T+K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S 249
+DF+P +A+ +D+TVK WD+ +L+ + GV C++F+P G L+ + +
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGT 251
Query: 250 LKV 252
LK+
Sbjct: 252 LKI 254
Score = 325 (119.5 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 74/251 (29%), Positives = 112/251 (44%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ +V H V ++ + +L + D V LW K HT+ + S
Sbjct: 52 RAYR---YVGHKDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRS 107
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + +A + +IK+W + + + +L H F P G S S D
Sbjct: 108 VDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F P G + S G D TVK+WD+ KLL ++ H
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH 227
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
G + CI FHP L T S+D T+K DL LI + T V ++F+ G
Sbjct: 228 SGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFAS 287
Query: 245 GLHESLKVFSW 255
G ++ +V W
Sbjct: 288 GGADT-QVLLW 297
Score = 299 (110.3 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 65/216 (30%), Positives = 102/216 (47%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
KR K EF AH++ V + + L T ED + +W++ + + SL HT +
Sbjct: 91 KRG-KFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVR 148
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
F L+ + + TIK+WD + V + VDF+P G AS D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQ 208
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+K+WD+R + Y+ H+ GVN I F P G ++++ D T+K+ DL G+L++ +
Sbjct: 209 TVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFEL 219
H G + + F L A+G AD V W EL
Sbjct: 269 HTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDEL 304
Score = 282 (104.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 70/252 (27%), Positives = 124/252 (49%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GH++ S+D P G+ A+ S DT L +W+ + + Y GH V +
Sbjct: 6 EDPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTS 65
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
++F+P G + S D TV+LW +FK H ++ +DF LAT S D++
Sbjct: 66 VQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRC-HDAVD- 265
+K W + + S T VRC F+PDGR ++ C +++K++ +C ++ D
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 266 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTI--GSVTRVN----GLSES 318
VG++ D N G + + + V VW V ++++ + Y + G V ++ G
Sbjct: 186 VGFANFVDFNP-SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLI 244
Query: 319 KSSASGNLSVLN 330
+S+ G L +L+
Sbjct: 245 TASSDGTLKILD 256
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 330 (121.2 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 99/385 (25%), Positives = 164/385 (42%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RA++ +V H V ++ + +L + D V LW K HT+ + S
Sbjct: 52 RAFR---YVGHKDVVTSVQFSPLGN-LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRS 107
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + +A + +IK+W++ + + +L H F P G S S D
Sbjct: 108 VDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F P+G + S G D+TVK+WD+ KLL ++ H
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 227
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
G + C+ FHP + T S+D T+K DL LI + T V ++F+ G
Sbjct: 228 SGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSS 287
Query: 245 GLHESLKVFSWEP----IRCHDAVDVGWSRLS--------DL-----NVHEGKLLGCSYN 287
G ++ +V W + C D + RL D+ + HEGK+ N
Sbjct: 288 GGADT-QVLLWRTNFDYLNCKDMIKRNLKRLHFDSSPHLVDIYPRTPHPHEGKIETVEIN 346
Query: 288 QSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNS 347
+ V+D+ P + + + + + ++ L E + L +S +
Sbjct: 347 PK---LEVIDLQTASPPVV-DILSFDSTTTTDTTVR-TLPDKGEEINRYFLNPSLLSPDC 401
Query: 348 DP--LVKETKSLGRL-SVSQNSDPL 369
P L K+T+ + L S SQ S PL
Sbjct: 402 SPAALKKKTEDMSDLPSESQRSIPL 426
Score = 326 (119.8 bits), Expect = 8.1e-27, P = 8.1e-27
Identities = 71/243 (29%), Positives = 124/243 (51%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGIDSVSFDSS 70
F H + + + S + L T D + LW KP A GH + SV F
Sbjct: 14 FKGHKAAITSVDFS-PSGKQLATASWDTFLMLWNC-KPQARAFRYVGHKDVVTSVQFSPL 71
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
L+A+ + T++LW ++ H + SVDF G+F A+ S D ++K+W++
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNM 131
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
++ +++ HT V +F+PDGR +VS ED T+K+WD T + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-S 249
+DF+P+ +A+ +D TVK WD+ +L+ + GV C++F+P G ++ + +
Sbjct: 192 VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGT 251
Query: 250 LKV 252
LK+
Sbjct: 252 LKI 254
Score = 285 (105.4 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 71/252 (28%), Positives = 127/252 (50%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GH++ SVDF P G+ A+ S DT L +W+ + + Y GH V +
Sbjct: 6 EDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTS 65
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
++F+P G + S D TV+LW +FK H ++ +DF LAT S D++
Sbjct: 66 VQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRC-HDAVD- 265
+K W++ + S T VRC F+PDGR ++ C +++K++ +C ++ D
Sbjct: 126 IKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 266 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTI--GSVTRVN----GLSES 318
VG++ D N + G + + + V +W + ++++ + Y + G V V+ G
Sbjct: 186 VGFANFVDFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYII 244
Query: 319 KSSASGNLSVLN 330
+S+ G L +L+
Sbjct: 245 TASSDGTLKILD 256
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 316 (116.3 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 81/287 (28%), Positives = 127/287 (44%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T +L H + V + + TG D LW++ + GHT+ I
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI 180
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
+SF+ LVA G+ T KLWD++ + V TLTGH + IS+ F+ G +GS D
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFD 240
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+ +W+ ++T GH +++ F D +++G D T KLWD GK +
Sbjct: 241 HTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300
Query: 183 CHEGQI--QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
H+ +I C D+ L+AT SAD T + + T E + + ++FNP G
Sbjct: 301 GHDDEILDSCFDYTGK--LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGN 358
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYN 287
LL G + + R DA G L L H ++ C++N
Sbjct: 359 RLLTGSSD-------KTARIWDA-QTGQC-LQVLEGHTDEIFSCAFN 396
Score = 294 (108.6 bits), Expect = 9.9e-24, P = 9.9e-24
Identities = 65/234 (27%), Positives = 112/234 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H++ + CL +S+ V TG D LW I + +L+GH++ I S+SF++S
Sbjct: 173 FRGHTAEIVCLSFNPQSTLV-ATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 231
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ G+ T+ +W+ + + V TL GH + S F+ +GS+D K+WD
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 291
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
C+ T GH + F G+ + + D T +++ + + + HEG+I I
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
F+P L TGS+D+T + WD +T + + T + FN G ++ G
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITG 405
Score = 287 (106.1 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 67/263 (25%), Positives = 122/263 (46%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV-LVAAGAASGTIKL 85
KS +TG D LW + +L GH + + +++F++ +A G+ T KL
Sbjct: 102 KSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
W +E K T GH + + + F+P A+GS+DT K+WDI+ + T GH+
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAE 221
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
+ ++ F G +++G D+TV +W+ G+ ++ H +I F+ L+ TGS
Sbjct: 222 IISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSM 281
Query: 206 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV 264
D+T K WD + + + + F+ G+ + + + ++FS C
Sbjct: 282 DKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATREC---- 337
Query: 265 DVGWSRLSDLNVHEGKLLGCSYN 287
++ L HEG++ S+N
Sbjct: 338 ------VTKLEGHEGEISKISFN 354
Score = 287 (106.1 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 89/334 (26%), Positives = 149/334 (44%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFH-PFG 113
L H + +V+ + S G+ T KLWD + + TL GHR+ ++ F+ P+G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+ A+GS D K+W + C HT++GHT + + F P V +G D T KLWD+
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET----FELIGSAGPETSG 229
+G+ + H +I + F+ + TGS D TV W+ +T + LIG +S
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSA 267
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLL-GC-SY 286
V FN D +L G + ++ K+ W DAV+ G ++ L H+ ++L C Y
Sbjct: 268 V----FNWDCSLILTGSMDKTCKL--W------DAVN-G-KCVATLTGHDDEILDSCFDY 313
Query: 287 NQSCVGVWVVD-ISRI-EPYTIGSVTRVNG----LSESKSSASGNLSVLNENSAKASLGK 340
+ D +RI T VT++ G +S+ + GN + + A +
Sbjct: 314 TGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Query: 341 LSVSQNSDPLVKETKSLGRLSVSQNSDPLLKETK 374
Q L T + + + D ++ +K
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Score = 283 (104.7 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 59/198 (29%), Positives = 93/198 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS+ + L +R+ +TG DH V +W + +L GH + I S F+ L+
Sbjct: 218 HSAEIISLSFNTSGNRI-ITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLI 276
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G+ T KLWD K V TLTGH + F G+ A+ S D +I+ +
Sbjct: 277 LTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRE 336
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
C+ +GH ++ I F P G +++G D T ++WD G+ L + H +I F+
Sbjct: 337 CVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN 396
Query: 195 PHEFLLATGSADRTVKFW 212
++ TGS D T + W
Sbjct: 397 YKGDIIITGSKDNTCRIW 414
Score = 259 (96.2 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 55/165 (33%), Positives = 83/165 (50%)
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
+ + L H +V + G F +GS D K+WD +HT +GH V AI F
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 153 -PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
P G + +G D T KLW + GK H F+ H +I C+ F+P L+ATGS D T K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+++ E + + ++ + L+FN G ++ G + V WE
Sbjct: 204 WDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT-VTVWE 247
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 330 (121.2 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 72/251 (28%), Positives = 122/251 (48%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V C+ + + TG D + +W + LSL+GH S + V
Sbjct: 162 WKLSRVISGHLGWVRCIAV-EPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGV 220
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ + + + +K WDLE K++R GH S S+ HP + A+ D+
Sbjct: 221 AVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTA 280
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
+IWD+R K +HT GHT V ++ +++G D+TV+LWDL AGK + H+
Sbjct: 281 RIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHK 340
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
++ I HP ++ A+ S D +K W + + + TS V C+ N +G L+ G
Sbjct: 341 KSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSG 398
Query: 246 LHESLKVFSWE 256
++ +F W+
Sbjct: 399 -GDNGTMFFWD 408
Score = 236 (88.1 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 71/273 (26%), Positives = 120/273 (43%)
Query: 8 KLQ-EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
KL+ H STV + + K L + GED +V W + I GH S + S++
Sbjct: 205 KLKLSLTGHVSTVRGVAVSTKHP-YLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLA 263
Query: 67 FDSS-EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ +VL +G S T ++WD+ V TLTGH + SV +GS D+ +
Sbjct: 264 LHPTIDVLATSGRDS-TARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTV 322
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WD+ + T H + V +I P S DN +K W GK + + H
Sbjct: 323 RLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHT 381
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLET---FELI------GSAGPETSGVRCLTFN 236
+ C+ + E +L +G + T+ FWD T F+ GS E +G+ + F+
Sbjct: 382 SIVNCMAANS-EGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSE-AGIFAMCFD 439
Query: 237 PDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGW 268
G L+ +++KV+ + ++ + W
Sbjct: 440 QSGSRLITAEADKTIKVYKEDDEASEESHPINW 472
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 314 (115.6 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 81/287 (28%), Positives = 127/287 (44%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T +L H + V + + TG D LW++ + GHT+ I
Sbjct: 121 TASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEI 180
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
+SF+ LVA G+ T KLWD++ + V TL GH + IS+ F+ G+ +GS D
Sbjct: 181 VCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFD 240
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+ +WD ++ GH +++ F D +++G D T KLWD T GK +
Sbjct: 241 HTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLT 300
Query: 183 CHEGQI--QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
H+ +I C D+ L+AT SAD T + + T + I + ++FNP G
Sbjct: 301 GHDDEILDSCFDYTGK--LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN 358
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYN 287
LL G + + R DA G L L H ++ C++N
Sbjct: 359 HLLTGSSD-------KTARIWDA-QTGQC-LQVLEGHTDEIFSCAFN 396
Score = 300 (110.7 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 66/234 (28%), Positives = 110/234 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H++ + CL +S+ V TG D LW I + +L GH++ I S+SF++S
Sbjct: 173 FRGHTAEIVCLSFNPQSTLV-ATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+ G+ T+ +WD + + V L GH + S F+ +GS+D K+WD
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
C+ T GH + F G+ + + D T +++ K + + HEG+I I
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKI 351
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
F+P L TGS+D+T + WD +T + + T + FN G ++ G
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITG 405
Score = 298 (110.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 68/263 (25%), Positives = 125/263 (47%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV-LVAAGAASGTIKL 85
KS +TG D LW + +L GH + + +++F++ +A G+ T KL
Sbjct: 102 KSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL 161
Query: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRG 145
W +E K T GH + + + F+P A+GS+DT K+WDI+ ++T +GH+
Sbjct: 162 WSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAE 221
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
+ ++ F G +++G D+TV +WD G+ ++ H +I F+ L+ TGS
Sbjct: 222 IISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSM 281
Query: 206 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAV 264
D+T K WD + + + + F+ G+ + + + ++FS +C
Sbjct: 282 DKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKC---- 337
Query: 265 DVGWSRLSDLNVHEGKLLGCSYN 287
++ L HEG++ S+N
Sbjct: 338 ------IAKLEGHEGEISKISFN 354
Score = 286 (105.7 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 60/204 (29%), Positives = 101/204 (49%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFH-PFG 113
L H + +V+ + S G+ T KLWD + + TL GHR+ ++ F+ P+G
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+ A+GS D K+W + C HT++GHT + + F P V +G D T KLWD+
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
G+ ++ + H +I + F+ + TGS D TV WD +T + + +
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA 267
Query: 234 TFNPDGRTLLCG-LHESLKVFSWE 256
+FN D +L G + ++ K+ W+
Sbjct: 268 SFNWDCSLILTGSMDKTCKL--WD 289
Score = 281 (104.0 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 61/198 (30%), Positives = 92/198 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS+ + L R+ +TG DH V +W + L GH + I S SF+ L+
Sbjct: 218 HSAEIISLSFNTSGDRI-ITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLI 276
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G+ T KLWD K V TLTGH + F G+ A+ S D +I+ +
Sbjct: 277 LTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRK 336
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
CI +GH ++ I F P G +++G D T ++WD G+ L + H +I F+
Sbjct: 337 CIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN 396
Query: 195 PHEFLLATGSADRTVKFW 212
++ TGS D T + W
Sbjct: 397 YKGNIVITGSKDNTCRIW 414
Score = 253 (94.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 62/199 (31%), Positives = 96/199 (48%)
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
+ + L H +V + G F +GS D K+WD ++T +GH V AI F
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 153 -PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
P G + +G D T KLW + GK H F+ H +I C+ F+P L+ATGS D T K
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRL 271
WD++ E + + ++ + L+FN G ++ G + V W DA D G ++
Sbjct: 204 WDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVV-W------DA-DTG-RKV 254
Query: 272 SDLNVHEGKLLGCSYNQSC 290
+ L H ++ S+N C
Sbjct: 255 NILIGHCAEISSASFNWDC 273
Score = 169 (64.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 48/185 (25%), Positives = 83/185 (44%)
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH-PHEF 198
K H + + G ++G D T KLWD +G+ L+ + H + I F+ P+
Sbjct: 89 KAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGD 148
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE- 256
+ATGS D+T K W +ET + + T+ + CL+FNP + G + + K++ +
Sbjct: 149 KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQN 208
Query: 257 -----PIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTR 311
+R H A + S N +++ S++ + V VW D R IG
Sbjct: 209 GEEVYTLRGHSAEIISLS----FNTSGDRIITGSFDHTVV-VWDADTGRKVNILIGHCAE 263
Query: 312 VNGLS 316
++ S
Sbjct: 264 ISSAS 268
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 329 (120.9 bits), Expect = 8.0e-27, P = 8.0e-27
Identities = 83/265 (31%), Positives = 133/265 (50%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS--------VSFDSSEVLVAAGAA 79
+S++L T LW++ N + +L GH++ + + VS D +V +A+ AA
Sbjct: 241 NSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAA 300
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW LE + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 301 DGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQ 360
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH++GV I F DG +GG D ++WDL G+ + + H +I ++F P+ +
Sbjct: 361 EGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYH 420
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPD-GRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + I + + V + F P+ G LL G +++ W
Sbjct: 421 VATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKI-WT-- 477
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 478 --HP----GWSPLKTLAGHEGKVMG 496
Score = 299 (110.3 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 62/189 (32%), Positives = 92/189 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T DH LW + IL GH+ G+ ++F + L G ++WD
Sbjct: 333 SGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWD 392
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH ++F P G A+GS D K+WD+R++ CI+T H V
Sbjct: 393 LRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVT 452
Query: 148 AIRFTPD-GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P+ G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 453 GVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYD 512
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 513 RTFKLWTAE 521
Score = 278 (102.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GH+ + V + S + + +LWDLE
Sbjct: 295 LASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQ 354
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + + F
Sbjct: 355 EEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNF 414
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G V +G DNT K+WDL K ++ H+ + + F P H L TG+ D T K
Sbjct: 415 SPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAK 474
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K+++ E
Sbjct: 475 IWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G + F + L+A SG KLW + + +V TL GH +N ++ F
Sbjct: 221 NNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVF 280
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GH+ V + + P GR++ +
Sbjct: 281 HPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTT 340
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D++ +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 341 CYDHSWRLWDLEAQEEILHQ-EGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCI 399
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRC 260
+ L F+P+G + G ++ KV+ +C
Sbjct: 400 MFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKC 440
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 308 (113.5 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 62/192 (32%), Positives = 98/192 (51%)
Query: 45 AIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC 104
A+ +P L+GH + I+SV F S L+ + + TIK+WD E + RTL GH +
Sbjct: 92 ALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 105 ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGED 164
+DF G AS S D +K+WD + C+ T GH V+ +RFTP G ++S D
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 165 NTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAG 224
T+K+W+ G + HE ++ I +A+ S D+T+K W++ E + +
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR 271
Query: 225 PETSGVRCLTFN 236
+ V CL F+
Sbjct: 272 EHSHVVECLAFS 283
Score = 282 (104.3 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 59/190 (31%), Positives = 93/190 (48%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + +N +K S ++V+ ED + +W +L GHT+ + + FD + L+
Sbjct: 105 HRNCINSVKF-HPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A+ +A TIKLWD + V+TL GH N V F P G+ S S D +K+W+
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGY 223
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
CI T GH V I + DG + S D T+K W++ G+ L ++ H ++C+ F
Sbjct: 224 CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Query: 195 PHEFLLATGS 204
+ GS
Sbjct: 284 TANIIDIPGS 293
Score = 243 (90.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 56/210 (26%), Positives = 100/210 (47%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y ++ V H V + + S + + D + W I K + + H+ ++ ++
Sbjct: 223 YCIKTLVGHEDWVRKITVSEDGS-CIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA 281
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
F ++ ++ G+ T E K + G N + G + A+GS D +K
Sbjct: 282 FSTANIIDIPGSLLST------PEGKS-KVKQGPGGNLVG----QCG-YLATGSRDKTIK 329
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF-KCHE 185
IW++ C+ TY GH V A+RF P G++++S G+D T+++WD+ G+ + + H
Sbjct: 330 IWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHT 389
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
I C+DF H +ATG D +K W L+
Sbjct: 390 HFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 55/165 (33%), Positives = 77/165 (46%)
Query: 97 LTGHRSNCI-SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
LTGHR NCI SV FHP S S D +K+WD T KGHT V I F G
Sbjct: 102 LTGHR-NCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG 160
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+ S D T+KLWD + H+ + C+ F P L + S D+T+K W+
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 216 TFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIR 259
T I + VR +T + DG + C +++K +W ++
Sbjct: 221 TGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIK--TWNIVK 263
Score = 211 (79.3 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 51/164 (31%), Positives = 80/164 (48%)
Query: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH 196
H GH +N+++F P +VS ED T+K+WD +G+ K H +Q IDF
Sbjct: 100 HILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKT 159
Query: 197 EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSW 255
LLA+ SAD T+K WD +T++ + + V C+ F P G L+ + ++KV W
Sbjct: 160 GNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKV--W 217
Query: 256 EPIR--CHDAVDVG---WSRLSDLNVHEGKLLGCSYNQSCVGVW 294
E C + VG W R ++ + CS +Q+ + W
Sbjct: 218 EAATGYCIKTL-VGHEDWVRKITVSEDGSCIASCSNDQT-IKTW 259
Score = 202 (76.2 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 64/247 (25%), Positives = 107/247 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H++ V + K+ +L + D + LW + + +L GH + V F S +
Sbjct: 147 HTNAVQDIDFD-KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQL 205
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ + TIK+W+ ++TL GH + G AS S D +K W+I K
Sbjct: 206 ISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGE 265
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
C+ TY+ H+ V + F+ + G L GK K +G +
Sbjct: 266 CLATYREHSHVVECLAFSTANIIDIPGS------LLSTPEGKS----KVKQGPGG--NLV 313
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC-GLHESLKVF 253
LATGS D+T+K W+L T + + + VR + F+P G+ LL G ++++V+
Sbjct: 314 GQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Query: 254 SWEPIRC 260
RC
Sbjct: 374 DIAQGRC 380
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 325 (119.5 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 83/291 (28%), Positives = 134/291 (46%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V + + ++ VTG D + +W + LSL+GH S + V
Sbjct: 198 WKLYRVISGHLGWVRSIAV-EPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV 256
Query: 66 SFDS-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+ + S L + G +K WDLE K++R GH S +D HP + + S D
Sbjct: 257 AVSNRSPYLFSCGEDK-QVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDAT 315
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRF-TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
++WDIR K +HT GHT V ++ + + + V G D T++LWDL AGK
Sbjct: 316 ARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTN 375
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H+ ++ + HP ++ A+GS D +K W I + + + L N DG L+
Sbjct: 376 HKKSVRALVLHPRQYTFASGSPDN-IKQWKFPDGNFIQNLSGHNAIINTLAVNSDG-VLV 433
Query: 244 CGLHE-SLKVFSWEP----IRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G ++ ++ W R H AV G L+ G + C ++QS
Sbjct: 434 SGADNGTIHMWDWRTGYNFQRIHAAVQPG-----SLDSESG-IFSCVFDQS 478
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 66/273 (24%), Positives = 114/273 (41%)
Query: 8 KLQ-EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
KL+ H STV + + +S L + GED +V W + I GH S + +
Sbjct: 241 KLKLSLTGHISTVRGVAVSNRSP-YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLD 299
Query: 67 FDSS-EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDTN 124
+ +VLV + T ++WD+ V TL+GH + +V + GS DT
Sbjct: 300 LHPTIDVLVTC-SRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTT 358
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+++WD+ T H + V A+ P SG DN +K W G + + H
Sbjct: 359 IRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDN-IKQWKFPDGNFIQNLSGH 417
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLET---FELI------GSAGPETSGVRCLTF 235
I + + + +L +G+ + T+ WD T F+ I GS E+ C+
Sbjct: 418 NAIINTLAVNS-DGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFD 476
Query: 236 NPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGW 268
+ R + +++KV+ + ++ V W
Sbjct: 477 QSESRLITAEADKTIKVYKEDDTATEESHPVNW 509
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 306 (112.8 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 78/267 (29%), Positives = 116/267 (43%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ F H V C+ S +L +G D V +W HT+ + S
Sbjct: 15 RAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRS 70
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F S + T+K+W K + +L+ H + F P G S S D
Sbjct: 71 VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKT 130
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+K+WD + C+H+Y H V + F P G + + G DNTVK+WD+ +LL ++ H
Sbjct: 131 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI----GSAGPETSGVRCLTFNPDGR 240
+ + FHP L T S+D T+K DL L+ G GP T+ + F+ G
Sbjct: 191 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT----VAFSRTGE 246
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVG 267
G + +V W+ D VD G
Sbjct: 247 YFASGGSDE-QVMVWKSN--FDIVDHG 270
Score = 302 (111.4 bits), Expect = 8.5e-26, P = 8.5e-26
Identities = 65/217 (29%), Positives = 110/217 (50%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + +W + + +GH + V+F S L+A+G+ T+++W + K T+
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTV 60
Query: 98 -TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
H + SV F G+ F + S D +K+W ++ + + H V +F+PDGR
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+VS +D TVKLWD ++ + +H + H G + +DFHP +A D TVK WD+ T
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKV 252
L+ ++ V L+F+P G L+ +S LK+
Sbjct: 181 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 212 (79.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 84/367 (22%), Positives = 153/367 (41%)
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
+D+ L +W ++ + + + GH V + F+P G + SG D TV++W
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV 60
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F+ H ++ + F T S D+TVK W + + S + VRC F+PDGR
Sbjct: 61 FRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 241 TLLCGLHE-SLKVFSWEPIRC-HDAVDVGWSRLSDLNVH-EGKLLGCSYNQSCVGVWVVD 297
++ + ++K++ C H + G ++ ++ H G + + + V VW V
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 298 ISRI-EPYTIGSVTRVNGLSESKS-------SASGNLSVLNENSAKASLGKLSVSQNSDP 349
R+ + Y + S VNGLS S S+ L +L+ + L L Q
Sbjct: 180 THRLLQHYQLHSAA-VNGLSFHPSGNYLITASSDSTLKILDLMEGRL-LYTLHGHQGPAT 237
Query: 350 LVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSE----PAKESKVLSSTGSVPGTPQ 405
V +++ G S SD + K+ + + E P + + SS G++P
Sbjct: 238 TVAFSRT-GEYFASGGSDEQVMVWKS--NFDIVDHGEVTKVPRPPATLASSMGNLPEVDF 294
Query: 406 RVNLNMGSKTSVVNS-----TAVVSKRTSTRANTASNVPILNKS-DIVPVIVPRTNTRFE 459
V G V S +V TST + + +L ++ I+ + T + +
Sbjct: 295 PVPPGRGRSVESVQSQPQEPVSVPQTLTSTLEHIVGQLDVLTQTVSILEQRLTLTEDKLK 354
Query: 460 QAVESRK 466
Q +E+++
Sbjct: 355 QCLENQQ 361
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 323 (118.8 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 82/265 (30%), Positives = 129/265 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI--------DSVSFDSSEVLVAAGAA 79
+S++L T LW++ N + +L GH + + +VS D +V +A+ AA
Sbjct: 241 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA 300
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 360
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH+ GV I F DG +GG D ++WDL G+ + + H +I I+F P+ +
Sbjct: 361 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 420
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + + + V + F P G LL G +++ W
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI-WT-- 477
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 478 --HP----GWSPLKTLAGHEGKVMG 496
Score = 289 (106.8 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + IL GH+ G+ ++F L G ++WD
Sbjct: 333 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH ++F P G A+GS D K+WD+R++ C++T H V
Sbjct: 393 LRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 452
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 453 GVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 512
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 513 RTFKLWMAE 521
Score = 280 (103.6 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GHT + V++ S + + +LWDLE
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + I F
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 414
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G + +G DNT K+WDL + ++ H+ + + F P H L TG+ D T K
Sbjct: 415 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 474
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K++ E
Sbjct: 475 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 65/258 (25%), Positives = 112/258 (43%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G I F + ++A SG KLW + + ++ TL GH +N ++ F
Sbjct: 221 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 280
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GHT V + + P GR++ +
Sbjct: 281 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTT 340
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D + +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 341 CYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 399
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLN---V 276
+ + F+P+G + G ++ KV+ RC + + ++ + +
Sbjct: 400 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 459
Query: 277 HEGKLLGCSYNQSCVGVW 294
H LL +Y+ + +W
Sbjct: 460 HGNFLLTGAYDNTAK-IW 476
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 320 (117.7 bits), Expect = 4.3e-26, P = 4.3e-26
Identities = 70/251 (27%), Positives = 115/251 (45%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
RAY+ +V H V L+ + + +L + D V LW + + HT+ + S
Sbjct: 52 RAYR---YVGHKDVVTSLQFSPQGN-LLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRS 107
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V F + + + +IK+W + + + +L H F P G S S D
Sbjct: 108 VDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
+KIWD K C++ + N + F+P+G + S G D+ V++WD+ +LL ++ H
Sbjct: 168 IKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVH 227
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ C+ FHP L T S+D TVK DL LI + T V ++F+ DG
Sbjct: 228 SCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTS 287
Query: 245 GLHESLKVFSW 255
G ++ +V W
Sbjct: 288 GGADA-QVLVW 297
Score = 319 (117.4 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 66/233 (28%), Positives = 117/233 (50%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGIDSVSFDSS 70
F H + + ++ T D + LW++ KP+A GH + S+ F
Sbjct: 14 FKGHKAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
L+A+ + T++LW L+ H + SVDF G+F + S D ++K+W +
Sbjct: 72 GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM 131
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
++ +++ HT V +F+PDGR +VS ED T+K+WD T+ + +++F G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF 191
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
+DF P+ +A+ +D V+ WD+ L+ + GV CL+F+P G +L+
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLV 244
Score = 277 (102.6 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 68/239 (28%), Positives = 118/239 (49%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
E+ + R GH++ S DF P + A+ S DT L +W ++ + Y GH V +
Sbjct: 6 EDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
++F+P G + S D TV+LW L +FK H ++ +DF L T S D++
Sbjct: 66 LQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKS 125
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRC-HDAVD- 265
+K W + + S T VRC F+PDGR ++ C +++K++ +C ++ D
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDS 185
Query: 266 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRI-EPYTIGSVTRVNGLSESKSSAS 323
VG++ D + + G + + + V +W + ++R+ + Y + S VN LS S S
Sbjct: 186 VGFANFVDFSPN-GTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG-VNCLSFHPSGNS 242
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 304 (112.1 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 62/214 (28%), Positives = 111/214 (51%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 149 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN 207
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 208 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 267
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L + +++ + H
Sbjct: 268 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGH 327
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFWDLET 216
+ C HP E ++A+ + D+T+K W +T
Sbjct: 328 TDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 68/261 (26%), Positives = 128/261 (49%)
Query: 1 MTTKRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHT 59
++ K Y L+ +A H+ V+ +K + L + D + +W ++SGH
Sbjct: 56 LSVKPNYTLKFTLAGHTKAVSAVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 114
Query: 60 SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG 119
GI V++ S L+ +G+ T+K+W+L K ++TL GH + +F+P SG
Sbjct: 115 LGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSG 174
Query: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
S D +++IWD+R C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 175 SFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 234
Query: 180 DFKCHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN- 236
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 235 TLIDDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 293
Query: 237 --PDGRTLLCGLHESLKVFSW 255
G+ ++ G +++ V+ W
Sbjct: 294 SVTGGKWIVSGSEDNM-VYIW 313
Score = 291 (107.5 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 62/233 (26%), Positives = 117/233 (50%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
SR+LV+G +D + +W + ++ +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 126 SRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 185
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 245
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 246 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 305
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L++ E++ T V C +P + E+ K W+
Sbjct: 306 EDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWK 358
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 327 (120.2 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 64/218 (29%), Positives = 109/218 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
++ + HS V + ++ L++ ED V LW++ A++S GHT + V F
Sbjct: 511 RKLIGHSGPVYGVSFS-PDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSP 569
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ T +LW + +R GH ++ V+FHP + +GS D ++WD
Sbjct: 570 LGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWD 629
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH-EGQI 188
+ C+ + GHT VN + +PDGRW+ SGGED + +WD+ +G+ L + H +
Sbjct: 630 VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASL 689
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE 226
+ F +L +G AD +V+ WD++ + AGPE
Sbjct: 690 YSLAFSRDGTVLVSGCADNSVRVWDVK--KNTNDAGPE 725
Score = 278 (102.9 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 84/306 (27%), Positives = 136/306 (44%)
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKI--------------VRTLTGHRSNCISVDFH 110
+ F+ LVAAG IKLW L+ + R L GH V F
Sbjct: 467 IEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFS 526
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
P ++ S S D +++W + + +YKGHT+ V ++F+P G + V+ D T +LW
Sbjct: 527 PDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLW 586
Query: 171 DLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
L F H + C++FHP+ + TGS+D+T + WD+ T + T+ V
Sbjct: 587 ATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSV 646
Query: 231 RCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDV-GWSRLSDLNV---HEGKLL--GC 284
CL +PDGR L G + + + W+ + G +R S ++ +G +L GC
Sbjct: 647 NCLAVSPDGRWLASGGEDGI-ICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGC 705
Query: 285 SYNQSCVGVWVV--DISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLS 342
+ N V VW V + + P VNG +E+ S + + + + K S
Sbjct: 706 ADNS--VRVWDVKKNTNDAGPEPEAFNNNVNG-NETNSDGTSSTQQQQQPQQQQQSKKES 762
Query: 343 VSQNSD 348
++ SD
Sbjct: 763 IA-TSD 767
Score = 257 (95.5 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 63/256 (24%), Positives = 114/256 (44%)
Query: 16 SSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKP-NAILS------------LSGHTSG 61
++ + C++ S+ V G +D + LW++ GKP ++L L GH+
Sbjct: 461 NNNMTCIEFNDDSTLV-AAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGP 519
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
+ VSF + + + T++LW L+ + + GH V F P G +F + S
Sbjct: 520 VYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASH 579
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
D ++W + + GH V+ + F P+ +V +G D T ++WD+ G + F
Sbjct: 580 DQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVF 639
Query: 182 KCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA-GPETSGVRCLTFNPDGR 240
H + C+ P LA+G D + WD+ + + S G + + L F+ DG
Sbjct: 640 LGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGT 699
Query: 241 TLLCGLHESLKVFSWE 256
L+ G ++ V W+
Sbjct: 700 VLVSGCADN-SVRVWD 714
Score = 179 (68.1 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T Y L+ F H + V+C++ S+ V TG D +W + N + GHT+ +
Sbjct: 588 TDHIYPLRIFAGHINDVDCVEFHPNSNYVF-TGSSDKTCRMWDVHTGNCVRVFLGHTNSV 646
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH-RSNCISVDFHPFGEFFASGSL 121
+ ++ +A+G G I +WD+ + ++++ GH R++ S+ F G SG
Sbjct: 647 NCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCA 706
Query: 122 DTNLKIWDIRK 132
D ++++WD++K
Sbjct: 707 DNSVRVWDVKK 717
Score = 171 (65.3 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 86/372 (23%), Positives = 151/372 (40%)
Query: 68 DSSEVLVAAGAASGTIKLWDLEEA-KIVRTLTGHRSN--CISVDFHPFGEFFASGSLDTN 124
D ++++ + IKL ++ + V T H +N ++F+ A+G D+
Sbjct: 425 DIKKMIIQVEDSRSKIKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSY 484
Query: 125 LKIWDI------------RKKGCIHTYK--GHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
+K+W + R K +T K GH+ V + F+PD ++++S ED TV+LW
Sbjct: 485 IKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLW 544
Query: 171 DLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE-TFELIGSAGPETSG 229
L L +K H + + F P T S D+T + W + + L AG +
Sbjct: 545 SLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAG-HIND 603
Query: 230 VRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNV----HEGKLLGCS 285
V C+ F+P+ + G + W+ + + V V + +N +G+ L
Sbjct: 604 VDCVEFHPNSNYVFTGSSDKT-CRMWD-VHTGNCVRVFLGHTNSVNCLAVSPDGRWLASG 661
Query: 286 YNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQ 345
+ VW + R G R + L S G +VL A S+ V +
Sbjct: 662 GEDGIICVWDIGSGRRLKSMRGHA-RAS-LYSLAFSRDG--TVLVSGCADNSVRVWDVKK 717
Query: 346 NSDPLVKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQ 405
N++ E ++ +V+ N ET + G S Q +P ++ + S S+ T
Sbjct: 718 NTNDAGPEPEAFNN-NVNGN------ETNSDGTSSTQQQQQPQQQQQ--SKKESI-ATSD 767
Query: 406 RVNLNMGSKTSV 417
+N KT V
Sbjct: 768 HMNAFFTKKTPV 779
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 321 (118.1 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 82/265 (30%), Positives = 129/265 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI--------DSVSFDSSEVLVAAGAA 79
+S++L T LW++ N + +L GH + + +VS D +V +A+ AA
Sbjct: 257 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA 316
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 317 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 376
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH+ GV I F DG +GG D ++WDL G+ + + H +I I+F P+ +
Sbjct: 377 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 436
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + + + V + F P G LL G +++ W
Sbjct: 437 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI-WT-- 493
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 494 --HP----GWSPLKTLAGHEGKVMG 512
Score = 289 (106.8 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + IL GH+ G+ ++F L G ++WD
Sbjct: 349 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 408
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH ++F P G A+GS D K+WD+R++ C++T H V
Sbjct: 409 LRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 468
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 469 GVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 528
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 529 RTFKLWMAE 537
Score = 278 (102.9 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 60/227 (26%), Positives = 101/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GHT + V + S + + +LWDLE
Sbjct: 311 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 370
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + I F
Sbjct: 371 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 430
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G + +G DNT K+WDL + ++ H+ + + F P H L TG+ D T K
Sbjct: 431 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 490
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K++ E
Sbjct: 491 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 537
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 65/258 (25%), Positives = 112/258 (43%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G I F + ++A SG KLW + + ++ TL GH +N ++ F
Sbjct: 237 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 296
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GHT V + + P GR++ +
Sbjct: 297 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 356
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D + +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 357 CYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 415
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLN---V 276
+ + F+P+G + G ++ KV+ RC + + ++ + +
Sbjct: 416 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 475
Query: 277 HEGKLLGCSYNQSCVGVW 294
H LL +Y+ + +W
Sbjct: 476 HGNFLLTGAYDNTAK-IW 492
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 321 (118.1 bits), Expect = 7.9e-26, P = 7.9e-26
Identities = 82/265 (30%), Positives = 129/265 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI--------DSVSFDSSEVLVAAGAA 79
+S++L T LW++ N + +L GH + + +VS D +V +A+ AA
Sbjct: 259 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA 318
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 319 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 378
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH+ GV I F DG +GG D ++WDL G+ + + H +I I+F P+ +
Sbjct: 379 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 438
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + + + V + F P G LL G +++ W
Sbjct: 439 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI-WT-- 495
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 496 --HP----GWSPLKTLAGHEGKVMG 514
Score = 289 (106.8 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + IL GH+ G+ ++F L G ++WD
Sbjct: 351 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 410
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH ++F P G A+GS D K+WD+R++ C++T H V
Sbjct: 411 LRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 470
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 471 GVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 530
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 531 RTFKLWMAE 539
Score = 278 (102.9 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 60/227 (26%), Positives = 101/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GHT + V + S + + +LWDLE
Sbjct: 313 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 372
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + I F
Sbjct: 373 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 432
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G + +G DNT K+WDL + ++ H+ + + F P H L TG+ D T K
Sbjct: 433 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 492
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K++ E
Sbjct: 493 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 539
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 65/258 (25%), Positives = 112/258 (43%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G I F + ++A SG KLW + + ++ TL GH +N ++ F
Sbjct: 239 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 298
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GHT V + + P GR++ +
Sbjct: 299 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 358
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D + +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 359 CYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 417
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLN---V 276
+ + F+P+G + G ++ KV+ RC + + ++ + +
Sbjct: 418 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 477
Query: 277 HEGKLLGCSYNQSCVGVW 294
H LL +Y+ + +W
Sbjct: 478 HGNFLLTGAYDNTAK-IW 494
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 320 (117.7 bits), Expect = 8.7e-26, P = 8.7e-26
Identities = 82/265 (30%), Positives = 129/265 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI--------DSVSFDSSEVLVAAGAA 79
+S++L T LW++ N + +L GH + + +VS D +V +A+ AA
Sbjct: 242 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAA 301
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 302 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 361
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH+ GV I F DG +GG D ++WDL G+ + + H +I I+F P+ +
Sbjct: 362 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 421
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + + + V + F P G LL G +++ W
Sbjct: 422 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI-WT-- 478
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 479 --HP----GWSPLKTLAGHEGKVMG 497
Score = 289 (106.8 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + IL GH+ G+ ++F L G ++WD
Sbjct: 334 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 393
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH ++F P G A+GS D K+WD+R++ C++T H V
Sbjct: 394 LRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 453
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 454 GVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 513
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 514 RTFKLWMAE 522
Score = 278 (102.9 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 60/227 (26%), Positives = 101/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GHT + V + S + + +LWDLE
Sbjct: 296 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 355
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + I F
Sbjct: 356 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 415
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G + +G DNT K+WDL + ++ H+ + + F P H L TG+ D T K
Sbjct: 416 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 475
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K++ E
Sbjct: 476 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 522
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 65/258 (25%), Positives = 112/258 (43%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G I F + ++A SG KLW + + ++ TL GH +N ++ F
Sbjct: 222 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 281
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GHT V + + P GR++ +
Sbjct: 282 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 341
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D + +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 342 CYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 400
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLN---V 276
+ + F+P+G + G ++ KV+ RC + + ++ + +
Sbjct: 401 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 460
Query: 277 HEGKLLGCSYNQSCVGVW 294
H LL +Y+ + +W
Sbjct: 461 HGNFLLTGAYDNTAK-IW 477
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 65
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 66 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 125
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 126 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 186 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 222
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 124
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 125 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 184
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 185 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 243
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 244 GGKWIVSGSEDNL-VYIW 260
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 154
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 155 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 214
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 215 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 274
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 275 TDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 60/233 (25%), Positives = 114/233 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 73 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 133 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 192
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 193 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 252
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 253 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 305
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 248
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 60/233 (25%), Positives = 114/233 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 248
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 60/233 (25%), Positives = 114/233 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 248
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 60/233 (25%), Positives = 114/233 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 248
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 60/233 (25%), Positives = 114/233 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 248
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 269
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 60/210 (28%), Positives = 107/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY GH I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 300
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 275 (101.9 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 60/233 (25%), Positives = 114/233 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + H+ + CI +F + +GS
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 279 EDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 300 (110.7 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 48 KPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN L +L+GHT + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS 91
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LKIWD+ C+ T KGH+ V F P +VSG D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIG 221
+V++WD+ GK L H + + F+ L+ + S D + WD + + LI
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 222 SAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
P S V+ F+P+G+ +L L +LK++ + +C
Sbjct: 212 DDNPPVSFVK---FSPNGKYILAATLDNTLKLWDYSKGKC 248
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 67/258 (25%), Positives = 125/258 (48%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A H+ V+ +K + L + D + +W ++SGH GI
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S L+ + + T+K+WD+ K ++TL GH + +F+P SGS D
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 150
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++IWD++ C+ T H+ V+A+ F DG +VS D ++WD +G+ L
Sbjct: 151 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 210
Query: 183 CHEGQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---P 237
+ + + F P+ +++LA + D T+K WD + + + + C+ N
Sbjct: 211 DDDNPPVSFVKFSPNGKYILAA-TLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVT 269
Query: 238 DGRTLLCGLHESLKVFSW 255
G+ ++ G ++L V+ W
Sbjct: 270 GGKWIVSGSEDNL-VYIW 286
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 61/233 (26%), Positives = 115/233 (49%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +LV+ +D + +W + + +L GH++ + +F+ L+ +G+ ++++WD+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ K ++TL H +V F+ G S S D +IWD C+ T V+
Sbjct: 159 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 218
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFH-PHEFLLATGS 204
++F+P+G+++++ DNT+KLWD + GK L + CH+ + CI +F + +GS
Sbjct: 219 FVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGS 278
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS-WE 256
D V W+L+T E++ T V +P + E+ K W+
Sbjct: 279 EDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Score = 278 (102.9 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 59/210 (28%), Positives = 106/210 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS+ V C +S+ ++V+G D V +W + + +L H+ + +V F+
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD + ++TL + +S V F P G++ + +LD LK+
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD K C+ TY H I F+ G+W+VSG EDN V +W+L +++ + H
Sbjct: 241 WDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGH 300
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP E ++A+ + D+T+K W
Sbjct: 301 TDVVISTACHPTENIIASAALENDKTIKLW 330
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 321 (118.1 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 73/209 (34%), Positives = 112/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 340 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 395
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 396 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 452
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 453 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 510
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL+T E I
Sbjct: 511 QFNKN-FVI-TSSDDGTVKLWDLKTGEFI 537
Score = 282 (104.3 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 264 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 318
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 319 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 376
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 377 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 433
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 434 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 467
Score = 260 (96.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 73/259 (28%), Positives = 119/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G+ + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 239 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 296
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 297 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 352
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 353 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 410
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 411 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 468
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 469 LKDNILVSGNAD-STVKIW 486
Score = 247 (92.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 374 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 430
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 431 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 486
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 487 DIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 539
Score = 44 (20.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRV 31
YK++ + H S V +G+K +V
Sbjct: 46 YKMKRKLDHGSEVRSFSLGKKPCKV 70
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 321 (118.1 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 73/209 (34%), Positives = 112/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 382 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 437
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 438 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 494
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 495 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 552
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL+T E I
Sbjct: 553 QFNKN-FVI-TSSDDGTVKLWDLKTGEFI 579
Score = 282 (104.3 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 306 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 360
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 361 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 418
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 475
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 476 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 509
Score = 260 (96.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 73/259 (28%), Positives = 119/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G+ + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 281 HRIDTNWRRGELRSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 338
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 339 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 394
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 452
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 453 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 510
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 511 LKDNILVSGNAD-STVKIW 528
Score = 247 (92.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 416 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 472
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 473 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 528
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 529 DIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 581
Score = 44 (20.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRV 31
YK++ + H S V +G+K +V
Sbjct: 88 YKMKRKLDHGSEVRSFSLGKKPCKV 112
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 319 (117.4 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 83/289 (28%), Positives = 138/289 (47%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + + SVS+ L+A+ + T+K+WD E + TL GH SV F
Sbjct: 291 ALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
AS S D+ +KIWD HT +GH V ++ F+ D + + S +D+TVK+WD
Sbjct: 351 RLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 409
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
G L H + H ++ + F LLA+ S D TVK WD T L + VR +
Sbjct: 410 TGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV 469
Query: 234 TFNPDGRTLLCGLHESLKVFSWEPIR-CHDAVDVGWSRL-SDLNV-HEGKLLGCSYNQSC 290
F+ D R LL + V W+ + H G S L + ++ H+ +LL + N
Sbjct: 470 IFSHDSR-LLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQT 528
Query: 291 VGVWVVDISRIEPYTIGSVTRVNGLSESKSSASGNLSVLNENSAKASLG 339
V +W ++ ++ +T + + K+++ + V + S ++++G
Sbjct: 529 VRIWDIEARSLQ-HTFDLDATIEAMRFDKATSLW-IQVTVKASIRSAMG 575
Score = 318 (117.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 78/248 (31%), Positives = 118/248 (47%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
LQ H + V + SR+L + +D V +W + +L GH+ + SV F
Sbjct: 289 LQALEGHEAAVLSVSYSH-DSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
L+A+ A+ T+K+WD + TL GHR SV F + AS S D+ +KIW
Sbjct: 348 HDSRLLAS-ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
D HT +GH V ++ F+ D + + S +D+TVK+WD G L H + H +
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ + F LLA+ S DRTV+ WD E + +S V ++F+ D R LL
Sbjct: 467 RSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSR-LLASASN 525
Query: 249 SLKVFSWE 256
V W+
Sbjct: 526 DQTVRIWD 533
Score = 301 (111.0 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 68/205 (33%), Positives = 99/205 (48%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS V + I SR+L + D V +W G + +L GH + SV F L+
Sbjct: 337 HSDLVRSV-IFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLL 394
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A+ + T+K+WD + TL GHR SV F + AS S D+ +KIWD
Sbjct: 395 ASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 454
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
HT +GH V ++ F+ D R + S +D TV++WD G H + H + + F
Sbjct: 455 LQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFS 514
Query: 195 PHEFLLATGSADRTVKFWDLETFEL 219
LLA+ S D+TV+ WD+E L
Sbjct: 515 HDSRLLASASNDQTVRIWDIEARSL 539
Score = 252 (93.8 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 54/165 (32%), Positives = 82/165 (49%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S++L + +D V +W G + +L GH + SV F L+A+ + T+K+WD
Sbjct: 391 SQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 450
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
+ TL GHR SV F AS S D ++IWD K HT +GH+ V +
Sbjct: 451 GTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTS 510
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
+ F+ D R + S D TV++WD+ A L H F + I+ + F
Sbjct: 511 VSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDL-DATIEAMRF 554
Score = 178 (67.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
C+ +GH V ++ ++ D R + S +D TVK+WD G L H + H ++ + F
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVF 253
LLA+ S D TVK WD T L + VR + F+ D + L +S +K++
Sbjct: 348 HDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 254 SWEPIRCHDAVDV--GWSRLSDLNVHEGKLLGCSYNQSCVGVW 294
++ W R S + H+ +LL + + S V +W
Sbjct: 407 DTGTGSLQHTLEGHRDWVR-SVIFSHDSQLLASASDDSTVKIW 448
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 322 (118.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 68/215 (31%), Positives = 105/215 (48%)
Query: 13 VAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV 72
V HS TV ++ L++G ED V LW++ A++S GH + VSF
Sbjct: 522 VGHSGTVYSTSFS-PDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
A + T +LW + +R GH ++ V FHP G + +GS D ++WD+
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Query: 133 KGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH-EGQIQCI 191
+ + GHT V +I PDGRW+ +G ED + +WD+ GK L + H + I +
Sbjct: 641 GDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSL 700
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE 226
+ +L +G AD TV+ WDL+ SA P+
Sbjct: 701 SYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPD 735
Score = 248 (92.4 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 51/193 (26%), Positives = 92/193 (47%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH+ + S SF + +G+ T++LW ++ + + GH V F P G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+FA+ S D ++W + + GH V+ + F P+G +V +G D T ++WD++
Sbjct: 580 HYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVS 639
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSA-GPETSGVRC 232
G + F H + I P L+TGS D + WD+ T + + G + +
Sbjct: 640 TGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYS 699
Query: 233 LTFNPDGRTLLCG 245
L+++ +G L+ G
Sbjct: 700 LSYSKEGNVLISG 712
Score = 243 (90.6 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 50/170 (29%), Positives = 81/170 (47%)
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
D +E +TL GH S F P ++ SGS D +++W + + +YKGH V
Sbjct: 511 DKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPV 570
Query: 147 NAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
+ F+P G + + D T +LW L F H + C+ FHP+ + TGS+D
Sbjct: 571 WDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSD 630
Query: 207 RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+T + WD+ T + + T+ V + PDGR L G + + + W+
Sbjct: 631 KTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGI-INVWD 679
Score = 165 (63.1 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y L+ F H + V+C+ V TG D +W + +++ GHT+ + S++
Sbjct: 600 YPLRIFAGHLNDVDCVSFHPNGCYVF-TGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIA 658
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNL 125
++ G+ G I +WD+ K ++ + GH N I S+ + G SG D +
Sbjct: 659 VCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTV 718
Query: 126 KIWDIRK 132
++WD++K
Sbjct: 719 RVWDLKK 725
Score = 40 (19.1 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 73 LVAAGAASGTIKLWDLEEAKI 93
+ AAG IK+W L+ + +
Sbjct: 480 IAAAGFQDSYIKIWSLDGSSL 500
Score = 37 (18.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAI 46
++CL R+ G +D + +W++
Sbjct: 469 MSCLDFS-DDCRIAAAGFQDSYIKIWSL 495
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 298 (110.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 72/246 (29%), Positives = 115/246 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H VNC R L+T +D V +W + L+GH + S F L+
Sbjct: 25 HHGEVNCSAFS-PDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A+ ++ +I+LWD+ +K + L GH+ + +V F P + ASG D +W+++
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR 143
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLL---HDFKCHEGQIQCI 191
+H GH + + F+P + +G D+TV +WDL A + H+ + H G I C+
Sbjct: 144 RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL 203
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESL 250
+ LLA+GS D+T+ W T L T V L F+PD L G ++
Sbjct: 204 CYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Query: 251 KVFSWE 256
KV W+
Sbjct: 263 KV--WD 266
Score = 295 (108.9 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 67/246 (27%), Positives = 108/246 (43%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
TK L H V R++ + DH + LW + + + L GH +
Sbjct: 55 TKSGRLLWRLAGHRGPVKSCCFS-PDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSV 113
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
++VSF +A+G +W+++ + V L GH + S DF P + A+GS D
Sbjct: 114 ETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWD 173
Query: 123 TNLKIWDIRKKGCI---HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
+ + IWD+R + H +GHT ++ + ++ G + SG D T+ +W T L
Sbjct: 174 STVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLPL 232
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG 239
K H + + F P E LA+ RTVK WD T + + + F PDG
Sbjct: 233 QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDG 292
Query: 240 RTLLCG 245
+ L+ G
Sbjct: 293 KLLVSG 298
Score = 289 (106.8 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 70/244 (28%), Positives = 111/244 (45%)
Query: 58 HTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFA 117
H ++ +F + + G + +W + +++ L GHR S F P G A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL 177
S S D ++++WD+ + C+H KGH R V + F+PD + + SGG D +W++ +G+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS---AGPETSGVRCLT 234
+H H IQ DF P LATGS D TV WDL + S T + CL
Sbjct: 145 VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLC 204
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVDV-G---WSRLSDLNVHEGKLLGCSYNQSC 290
++ G LL + W+P + + + G W + E KL Y+++
Sbjct: 205 YSASG--LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRT- 261
Query: 291 VGVW 294
V VW
Sbjct: 262 VKVW 265
Score = 222 (83.2 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 62/205 (30%), Positives = 89/205 (43%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R+ L H +V + S+ L +GG D + +W + + L GH I S
Sbjct: 99 RSKCLHVLKGHQRSVETVSFS-PDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQS 157
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSL 121
F + +A G+ T+ +WDL + V L GH N + + G ASGS
Sbjct: 158 SDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSW 216
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
D + +W KGHT VN++ F+PD + S G TVK+WD GK L
Sbjct: 217 DKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETL 276
Query: 182 K-CHEGQIQCIDFHPHEFLLATGSA 205
K + CI F P LL +G+A
Sbjct: 277 KGMLDVAHACI-FTPDGKLLVSGAA 300
Score = 189 (71.6 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 53/206 (25%), Positives = 90/206 (43%)
Query: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
NC + F P G + S D + +W + + GH V + F+PDGR + S
Sbjct: 30 NCSA--FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSS 87
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D++++LWD+ K LH K H+ ++ + F P LA+G D+ W++++ +
Sbjct: 88 SDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHL 147
Query: 223 AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLL 282
++ F+P +L G +S V W+ +R V V + L H G +
Sbjct: 148 LVGHCDSIQSSDFSPTSDSLATGSWDST-VHIWD-LRASTPV-VSYHNLEG---HTGNIS 201
Query: 283 GCSYNQSCV---GVWVVDISRIEPYT 305
Y+ S + G W I +P T
Sbjct: 202 CLCYSASGLLASGSWDKTICVWKPTT 227
Score = 163 (62.4 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
G + Y H VN F+PDGR +++ +D V +W +G+LL H G ++ F
Sbjct: 17 GRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCF 76
Query: 194 HPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVF 253
P L+A+ S+D +++ WD+ + + V ++F+PD + L G + +
Sbjct: 77 SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK-RAI 135
Query: 254 SWE 256
WE
Sbjct: 136 VWE 138
Score = 139 (54.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ ++CL +S +L +G D + +W N L L GHT ++S++F E+ +
Sbjct: 196 HTGNISCLCYS--ASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKL 253
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
A+ S T+K+WD K + TL G + F P G+ SG+ T
Sbjct: 254 ASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAAVT 302
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 298 (110.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 68/257 (26%), Positives = 120/257 (46%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
K Y L+ +A HS+ ++ +K + L + D + +W N +L GH+ I
Sbjct: 26 KPNYALRLTLAGHSAAISSVKFS-PNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEI 84
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V++ S + + + T+K+WD+ K ++TL GH DF+P SGS D
Sbjct: 85 SDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
++KIW+++ C+ T H+ ++A+ F +G +VSG D ++WD +G+ L
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL- 203
Query: 183 CHEGQ--IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL--TFNPD 238
EG + + F P+ + T + D T+K WD + + + CL +F+
Sbjct: 204 ADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263
Query: 239 GRTLLCGLHESLKVFSW 255
GR + E V+ W
Sbjct: 264 GRKWVVSGSEDNMVYIW 280
Score = 296 (109.3 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 63/210 (30%), Positives = 109/210 (51%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ HS V C S+ ++V+G D V +W + + +LS H+ I +V+F+
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSN-LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN 174
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
+ L+ +G+ G ++WD + +RTL + +S V F P G++ + +LD LK+
Sbjct: 175 CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKL 234
Query: 128 WDIRKKGCIHTYKGHTRGVNAI--RFTPDGR-WVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
WD + C+ TY GH + F+ GR WVVSG EDN V +W+L +++ + H
Sbjct: 235 WDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGH 294
Query: 185 EGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ HP + ++A+ + D+T+K W
Sbjct: 295 TDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 295 (108.9 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 68/217 (31%), Positives = 110/217 (50%)
Query: 48 KPN-AI-LSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
KPN A+ L+L+GH++ I SV F + +A+ AA I +W + +TL GH
Sbjct: 26 KPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEIS 85
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V + S S D LK+WD+R C+ T KGH+ V F P +VSG D
Sbjct: 86 DVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDE 145
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGP 225
+VK+W++ GK L H I ++F+ + L+ +GS D + WD + + + +
Sbjct: 146 SVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLAD 205
Query: 226 ETSG-VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
E + V + F+P+G+ +L L +LK++ + RC
Sbjct: 206 EGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC 242
Score = 274 (101.5 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 57/210 (27%), Positives = 110/210 (52%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS ++ + SSR LV+ +D + +W + + +L GH+ + F+ L+
Sbjct: 80 HSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLI 138
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+G+ ++K+W+++ K ++TL+ H +V+F+ G SGS D +IWD
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ 198
Query: 135 CIHTYKGHTRG-VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI-- 191
C+ T V+ ++F+P+G+++++ DNT+KLWD + G+ L + H+ + C+
Sbjct: 199 CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFA 258
Query: 192 DFH-PHEFLLATGSADRTVKFWDLETFELI 220
F + +GS D V W+L+T E++
Sbjct: 259 SFSVTGRKWVVSGSEDNMVYIWNLQTKEIV 288
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 321 (118.1 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 73/209 (34%), Positives = 112/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 380 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 435
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 436 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 492
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 493 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 550
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL+T E I
Sbjct: 551 QFNKN-FVI-TSSDDGTVKLWDLKTGEFI 577
Score = 282 (104.3 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 304 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 358
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 359 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 416
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 417 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 473
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 474 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 507
Score = 260 (96.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 73/259 (28%), Positives = 119/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G+ + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 279 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 336
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 337 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 392
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 393 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 450
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 451 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 508
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 509 LKDNILVSGNAD-STVKIW 526
Score = 247 (92.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 414 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 470
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 471 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 526
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 527 DIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 579
Score = 44 (20.5 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRV 31
YK++ + H S V +G+K +V
Sbjct: 86 YKMKRKLDHGSEVRSFSLGKKPCKV 110
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 321 (118.1 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 73/209 (34%), Positives = 112/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 382 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 437
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 438 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 494
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 495 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCL 552
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL+T E I
Sbjct: 553 QFNKN-FVI-TSSDDGTVKLWDLKTGEFI 579
Score = 282 (104.3 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 306 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 360
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 361 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 418
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 419 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 475
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 476 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 509
Score = 260 (96.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 73/259 (28%), Positives = 119/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G+ + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 281 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 338
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 339 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 394
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 395 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 452
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 453 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 510
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 511 LKDNILVSGNAD-STVKIW 528
Score = 247 (92.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 416 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 472
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 473 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 528
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 529 DIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 581
Score = 44 (20.5 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRV 31
YK++ + H S V +G+K +V
Sbjct: 88 YKMKRKLDHGSEVRSFSLGKKPCKV 112
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 297 (109.6 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 62/208 (29%), Positives = 108/208 (51%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H++ C+ +S+ ++V+G D V +W + + L H+ + +V F+
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSN-MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKI 127
L+ + + G ++WD V+TL + +S V F P G+F G+LD L++
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Query: 128 WDIRKKGCIHTYKGHTRGVNAIR--FT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
W+I + TY GH I F+ +G+ +VSG EDN V +W+L + KLL + H
Sbjct: 225 WNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGH 284
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFW 212
+ + HP E L+A+GS D+TV+ W
Sbjct: 285 TETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 294 (108.6 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 63/256 (24%), Positives = 119/256 (46%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLSGHTSGIDS 64
Q +H+ V+ +K R+L + D + + I N + +GH +GI
Sbjct: 18 QTLTSHNRAVSSVKFS-SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V+F S + + + T+KLWD+E +++TL GH + V+F+P SGS D
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
++IWD+ C+ H+ V A+ F DG +VS D ++WD G +
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 185 EGQ-IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT--FN-PDGR 240
E + + F P+ + G+ D T++ W++ + + + + + C++ F+ +G+
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGK 256
Query: 241 TLLCGLHESLKVFSWE 256
++ G ++ V WE
Sbjct: 257 RIVSGSEDNC-VHMWE 271
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 84/291 (28%), Positives = 135/291 (46%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE-----AKIVRTLTGHRSNCISVD 108
+L+ H + SV F S L+A+ +A TI+ + + A+ V+ TGH + V
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F F S S D LK+WD+ I T GHT + F P +VSG D TV+
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIGSAG 224
+WD+T GK L H + +DF+ L+ + S D + WD T LI
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 225 PETSGVRCLTFNPDGRTLLCG-LHESLKVF---SWEPIRCHDA-VDVGWSRLSDLNVHEG 279
P S VR F+P+G+ +L G L +L+++ S + ++ + V+ + S +V G
Sbjct: 199 PPVSFVR---FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNG 255
Query: 280 KLLGCSYNQSCVGVWVVD----ISRIEPYTIGSVTRVNGLSESKSSASGNL 326
K + +CV +W ++ + ++E +T +V V ASG+L
Sbjct: 256 KRIVSGSEDNCVHMWELNSKKLLQKLEGHT-ETVMNVACHPTENLIASGSL 305
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/109 (25%), Positives = 55/109 (50%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG---IDSVSFDSSEVLVAAGAASGTIK 84
+ + ++ G D+ + LW I + + +GH + I S ++ + +G+ +
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
+W+L K+++ L GH ++V HP ASGSLD ++IW +K+
Sbjct: 269 MWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 320 (117.7 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 73/209 (34%), Positives = 111/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 513 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 568
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 569 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 625
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 626 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCL 683
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL T E I
Sbjct: 684 QFNKN-FVI-TSSDDGTVKLWDLRTGEFI 710
Score = 282 (104.3 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 437 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 491
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 492 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 549
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 550 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 606
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 607 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 640
Score = 258 (95.9 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 73/259 (28%), Positives = 118/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 412 HRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 469
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 470 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 525
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 526 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 583
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 584 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 641
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 642 LKDNILVSGNAD-STVKIW 659
Score = 247 (92.0 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 547 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 603
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 604 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 659
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 660 DIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEFIRN 712
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 317 (116.6 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 99/347 (28%), Positives = 156/347 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS V CL++ R +L +G D + LW + + L GH+SG+ + FD +++
Sbjct: 272 HSDGVMCLQLVRN---ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLI- 327
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+G+ TI++W+ ++ + L GH + + + F SGS D +K+W G
Sbjct: 328 -SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLLVSGSADCTVKLWHF-SGG 383
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
T +GHT VN++R D V+SG +D+T+K+W L LH F H G +Q +
Sbjct: 384 KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA 443
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS 254
L + S D T+K WD+E + + + GV + D L+ G H+ + V
Sbjct: 444 DSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGV-VKV 498
Query: 255 WEPIRC-HDAVD----VGWSRLSDLNV----HEGK----LLGCSYNQSCVGVWVVDISRI 301
WE C H + V L D V +GK L + N+S V V IS +
Sbjct: 499 WEACECVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWLFNNAPNESPVSTQSVPISSL 558
Query: 302 EPY-TIGSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNS 347
+ SV R + SS+ N+S N N ++ VS S
Sbjct: 559 NGQRSNSSVQRALSSVPNYSSSLSNISTRNLNIPPSNANNDDVSIQS 605
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 321 (118.1 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 65/208 (31%), Positives = 107/208 (51%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+ + F+ HS V S+ L++ ED LW++ + ++ GH + VSF
Sbjct: 671 EFKTFLGHSGPVYGCSFS-PDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSF 729
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
A + T +LW +R TGH S+C +V FHP + A+GS D + ++
Sbjct: 730 SPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARL 789
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
W+I+ C+ + GH + + F+PDGR + + GED +V LWDL+ GK + H
Sbjct: 790 WEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKC 849
Query: 188 IQCIDFHPHEFLLATGSADRTVKFWDLE 215
+ +DF +LA+GS+D TV+ WD++
Sbjct: 850 VYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 257 (95.5 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 56/198 (28%), Positives = 87/198 (43%)
Query: 48 KPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISV 107
K + + GH+ + SF + + + T +LW +E + GH V
Sbjct: 668 KESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDV 727
Query: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTV 167
F PFG +FA+ S D ++W + + GH N +RF P+ ++ +G D +
Sbjct: 728 SFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSA 787
Query: 168 KLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
+LW++ GK + F H I + F P LLAT D +V WDL T + + T
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHT 847
Query: 228 SGVRCLTFNPDGRTLLCG 245
V L F+ DG L G
Sbjct: 848 KCVYSLDFSCDGSILASG 865
Score = 223 (83.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 50/181 (27%), Positives = 83/181 (45%)
Query: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
+G++S + KL ++ +T GH F P ++ S S DT ++W +
Sbjct: 654 SGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSN 713
Query: 136 IHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP 195
+ YKGH V + F+P G + + D T +LW L F H + FHP
Sbjct: 714 LVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHP 773
Query: 196 HEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSW 255
+ LATGS D++ + W+++T + + + + + F+PDGR LL E V W
Sbjct: 774 NINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGR-LLATAGEDTSVILW 832
Query: 256 E 256
+
Sbjct: 833 D 833
Score = 185 (70.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 42/132 (31%), Positives = 63/132 (47%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG 61
TT L+ F H S N ++ + L TG D LW I + GH +
Sbjct: 749 TTNHISPLRIFTGHLSDCNTVRF-HPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAP 807
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI-SVDFHPFGEFFASGS 120
I +V+F L+A ++ LWDL K V+ + GH + C+ S+DF G ASGS
Sbjct: 808 IYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGH-TKCVYSLDFSCDGSILASGS 866
Query: 121 LDTNLKIWDIRK 132
D +++WD++K
Sbjct: 867 SDCTVRLWDVKK 878
Score = 61 (26.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAK 92
G+++ LVA G + ++K+W+L+E K
Sbjct: 560 GLNTTDISKDAQLVAGGFSDSSVKIWNLKEMK 591
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 314 (115.6 bits), Expect = 4.2e-25, P = 4.2e-25
Identities = 81/265 (30%), Positives = 129/265 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI--------DSVSFDSSEVLVAAGAA 79
+S++L T LW++ + + +L GH + + +VS D +V +A+ AA
Sbjct: 241 NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA 300
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 360
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH+ GV I F DG +GG D ++WDL G+ + + H +I I+F P+ +
Sbjct: 361 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 420
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + + + V + F P G LL G +++ W
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKI-WT-- 477
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 478 --HP----GWSPLKTLAGHEGKVMG 496
Score = 287 (106.1 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + IL GH+ G+ ++F L G ++WD
Sbjct: 333 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH ++F P G A+GS D K+WD+R++ C++T H V
Sbjct: 393 LRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 452
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 453 GVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 512
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 513 RTFKLWMAE 521
Score = 278 (102.9 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 60/227 (26%), Positives = 101/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GHT + V + S + + +LWDLE
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + I F
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 414
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G + +G DNT K+WDL + ++ H+ + + F P H L TG+ D T K
Sbjct: 415 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K++ E
Sbjct: 475 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 210 (79.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 65/258 (25%), Positives = 112/258 (43%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G I F + ++A SG KLW + + ++ TL GH +N ++ F
Sbjct: 221 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVF 280
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GHT V + + P GR++ +
Sbjct: 281 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D + +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 341 CYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 399
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLN---V 276
+ + F+P+G + G ++ KV+ RC + + ++ + +
Sbjct: 400 MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 459
Query: 277 HEGKLLGCSYNQSCVGVW 294
H LL +Y+ + +W
Sbjct: 460 HGDFLLTGAYDNTAK-IW 476
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 322 (118.4 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 70/233 (30%), Positives = 124/233 (53%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ V H+ V ++ S ++++G D + +W + + +L GHTS + +
Sbjct: 1028 LRTLVGHTGGVWSSQM---SGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH 1084
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLK 126
S+V+ +G+ T+++WD+E+ + L GH + C+ D G+ SG+ D +K
Sbjct: 1085 GSKVV--SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD----GKLIVSGAYDYMVK 1138
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
IW ++ C+HT +GHT V +++F DG VVSG D ++++WD+ G H H+
Sbjct: 1139 IWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQS 1196
Query: 187 QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS-AGPET--SGVRCLTFN 236
++ + +L +G+AD TVK WD+ T + + + +GP S V CL FN
Sbjct: 1197 LTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN 1247
Score = 306 (112.8 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 68/209 (32%), Positives = 109/209 (52%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + S+V V+G D + +W I + + + L GH + + V +D L+
Sbjct: 1074 HTSTVRCMHL--HGSKV-VSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK--LI 1128
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+W E + + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 1129 VSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGN 1186
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
C HT GH + + + +VSG D+TVK+WD+T G+ L H + C+
Sbjct: 1187 CKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCL 1244
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + T S D TVK WD++T + I
Sbjct: 1245 QFNSR--FVVTSSDDGTVKLWDVKTGDFI 1271
Score = 295 (108.9 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 59/198 (29%), Positives = 102/198 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ S +V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 998 ITCLQF---SGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN--IIISGS 1052
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+WD++ V TL GH S + H G SGS D L++WDI + C+H
Sbjct: 1053 TDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKVVSGSRDATLRVWDIEQGSCLHV 1110
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DG+ +VSG D VK+W + LH + H ++ + F
Sbjct: 1111 LVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH- 1167
Query: 199 LLATGSADRTVKFWDLET 216
+ +GS D +++ WD+ET
Sbjct: 1168 -VVSGSLDTSIRVWDVET 1184
Score = 274 (101.5 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 73/242 (30%), Positives = 113/242 (46%)
Query: 55 LSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
L GH I + F + ++ +G+ T+K+W K +RTL GH S G
Sbjct: 990 LKGHDDHVITCLQFSGNRIV--SGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--G 1045
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
SGS D LK+WD+ C+HT +GHT V + G VVSG D T+++WD+
Sbjct: 1046 NIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIE 1103
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
G LH H ++C+ + L+ +G+ D VK W E E + + T+ V L
Sbjct: 1104 QGSCLHVLVGHLAAVRCVQYDGK--LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSL 1161
Query: 234 TFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVG 292
F DG ++ G L S++V+ E C + S S + + + L+ + + S V
Sbjct: 1162 QF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNAD-STVK 1218
Query: 293 VW 294
VW
Sbjct: 1219 VW 1220
Score = 244 (91.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 53/175 (30%), Positives = 91/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L V H + V C++ K ++V+G D+ V +W + + +L GHT+ + S+ FD
Sbjct: 1108 LHVLVGHLAAVRCVQYDGK---LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD 1164
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
V+ +G+ +I++WD+E TL GH+S ++ SG+ D+ +K+W
Sbjct: 1165 GLHVV--SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ--NILVSGNADSTVKVW 1220
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI C+ T G H V ++F + R+VV+ +D TVKLWD+ G + +
Sbjct: 1221 DITTGQCLQTLSGPNKHHSAVTCLQF--NSRFVVTSSDDGTVKLWDVKTGDFIRN 1273
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 313 (115.2 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 81/265 (30%), Positives = 128/265 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI--------DSVSFDSSEVLVAAGAA 79
+S++L T LW++ + + +L GH + + +VS D +V +A+ AA
Sbjct: 241 NSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA 300
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY 139
G++KLW L+ + V + GH V +HP G F + D + ++WD+ + I
Sbjct: 301 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 360
Query: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFL 199
+GH+ GV I F DG +GG D ++WDL G+ + + H +I I F P+ +
Sbjct: 361 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYH 420
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP-DGRTLLCGLHESLKVFSWEPI 258
+ATGS D T K WDL + + + V + F P G LL G +++ W
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKI-WT-- 477
Query: 259 RCHDAVDVGWSRLSDLNVHEGKLLG 283
H GWS L L HEGK++G
Sbjct: 478 --HP----GWSPLKTLAGHEGKVMG 496
Score = 286 (105.7 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 60/189 (31%), Positives = 88/189 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + IL GH+ G+ ++F L G ++WD
Sbjct: 333 SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH + F P G A+GS D K+WD+R++ C++T H V
Sbjct: 393 LRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVT 452
Query: 148 AIRFTP-DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
++F P G ++++G DNT K+W L HEG++ +D L+AT S D
Sbjct: 453 GVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYD 512
Query: 207 RTVKFWDLE 215
RT K W E
Sbjct: 513 RTFKLWMAE 521
Score = 277 (102.6 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 60/227 (26%), Positives = 101/227 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L + D V LW++ + + GHT + V + S + + +LWDLE
Sbjct: 295 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 354
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ + GH + FH G +G LD ++WD+R CI +GH + + I F
Sbjct: 355 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISF 414
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVK 210
+P+G + +G DNT K+WDL + ++ H+ + + F P H L TG+ D T K
Sbjct: 415 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
W + + + V L + DG+ + C + K++ E
Sbjct: 475 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 65/258 (25%), Positives = 113/258 (43%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
N S G I F + ++A SG KLW + + ++ TL GH +N ++ F
Sbjct: 221 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVF 280
Query: 110 HPFGEF--------FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
HP AS + D ++K+W + + +GHT V + + P GR++ +
Sbjct: 281 HPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 340
Query: 162 GEDNTVKLWDLTAGK-LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D + +LWDL A + +LH + H + I FH L TG D + WDL T I
Sbjct: 341 CYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCI 399
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLN---V 276
+ ++F+P+G + G ++ KV+ RC + + ++ + +
Sbjct: 400 MFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPI 459
Query: 277 HEGKLLGCSYNQSCVGVW 294
H LL +Y+ + +W
Sbjct: 460 HGDFLLTGAYDNTAK-IW 476
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 298 (110.0 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 64/235 (27%), Positives = 113/235 (48%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H + L + ++ TGG D K LW IG + L GH + ++F
Sbjct: 66 FTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDG 125
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
L+A+G G ++++D + L G + V +HP G +GS D +L +W+
Sbjct: 126 QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNAD 185
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH----EGQ 187
K+ ++ + GH V FTPDG+ + +G +D ++ +W+ + +H K H EG
Sbjct: 186 KEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG- 244
Query: 188 IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ C+D + + L +GS D +V ++ T +++ S T V C+ F+P T+
Sbjct: 245 LTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATI 299
Score = 210 (79.0 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 52/221 (23%), Positives = 100/221 (45%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGH---TS 60
K AY L F H+ V C +++ TG +D + +W +I + GH T
Sbjct: 186 KEAY-LNMFSGHNLNVTCGDF-TPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTE 243
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF---A 117
G+ + +S+ L +G+ G++ + ++ K+V +L H + V F P A
Sbjct: 244 GLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAA 303
Query: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL 177
+G +D L IWD++ + H GV ++ + +++ +G + TV +WD G
Sbjct: 304 TGGMDKKLIIWDLQHSTPRFICE-HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNC 362
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+H + H+ +Q I + + + S D T + ++ F+
Sbjct: 363 VHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQ 403
Score = 200 (75.5 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 50 NAILSLSGHTSGIDSVSFDSSEV-LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD 108
+++ + +GH + +++ ++ LVA G LW + L GH+ + +
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA 120
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F G+ ASG LD ++I+D G G+ +R+ P G V++G ED ++
Sbjct: 121 FSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIG--SAGP- 225
+W+ L+ F H + C DF P L+ TGS D ++ W+ +T E I P
Sbjct: 181 MWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY 240
Query: 226 ETSGVRCLTFNPDGRTLLCG 245
T G+ CL N + + G
Sbjct: 241 HTEGLTCLDINSNSSLAISG 260
Score = 177 (67.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 43/168 (25%), Positives = 72/168 (42%)
Query: 94 VRTLTGHRSNCISVDFHPF-GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
V T TGH+ ++ P A+G D +W I GH V+ + F+
Sbjct: 63 VHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS 122
Query: 153 PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
DG+ + SGG D V+++D ++G L I+ + +HP ++ GS D ++ W
Sbjct: 123 YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMW 182
Query: 213 DLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + + V C F PDG+ L+C + + W P C
Sbjct: 183 NADKEAYLNMFSGHNLNVTCGDFTPDGK-LICTGSDDASLIVWNPKTC 229
Score = 38 (18.4 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 394 LSSTGSVPGTPQRVNLNMGSKTSVVNS 420
L+ +GS G+ VN+ G S +NS
Sbjct: 256 LAISGSKDGSVHIVNIVTGKVVSSLNS 282
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 293 (108.2 bits), Expect = 7.9e-25, P = 7.9e-25
Identities = 72/216 (33%), Positives = 107/216 (49%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
HS V + I L +G D+ + LW I K + GHT + SV+F S +
Sbjct: 69 HSHFVQDVVISHDGQFAL-SGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI 127
Query: 75 AAGAASGTIKLWD-LEEAKIVRTLTG---HRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
+G+ TIK+W+ L E K TL G H+ + F P SGS D +KIWDI
Sbjct: 128 ISGSRDATIKVWNTLGECKF--TLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDI 185
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ C HT HT VN + +PDG SGG+D LW+L++GK L+ + I
Sbjct: 186 KSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARN-TINA 244
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE 226
+ F P+++ L+ + D+ + WDL T +++ PE
Sbjct: 245 LAFSPNKYWLSAATDDKII-IWDLLTKQVLAEIVPE 279
Score = 270 (100.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 66/214 (30%), Positives = 107/214 (50%)
Query: 54 SLSGHTSGIDS--VSFDSSEVLVAAGAASGTIKLWDL------EEAKIVRTLTGHRSNCI 105
SL GH + S VS ++ + ++++ + T+ +W L K R+L GH
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISS-SRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQ 74
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V G+F SGS D L++WDI K +KGHT+ V ++ F+ D R ++SG D
Sbjct: 75 DVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDA 134
Query: 166 TVKLWDLTAGKL---LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
T+K+W+ T G+ L + H+ + CI F P+ + +GS D VK WD+++F+ +
Sbjct: 135 TIKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHT 193
Query: 223 AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
T V +T +PDG G ++ WE
Sbjct: 194 LTDHTGYVNTVTISPDGSLCASGGKDTFACL-WE 226
Score = 258 (95.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 64/253 (25%), Positives = 111/253 (43%)
Query: 13 VAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAIL------SLSGHTSGIDSVS 66
V H+ V + + ++ +++ D V +W + +A SL GH+ + V
Sbjct: 18 VGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV 77
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
+G+ T++LWD+ + R GH + +SV F SGS D +K
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIK 137
Query: 127 IWDIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+W+ + C T +G H V+ IRF+P+ +VSG DN VK+WD+ + K H
Sbjct: 138 VWNTLGE-CKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTD 196
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H G + + P L A+G D W+L + + + + + L F+P+ L
Sbjct: 197 HTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT-INALAFSPNKYWLS 255
Query: 244 CGLHESLKVFSWE 256
+ K+ W+
Sbjct: 256 AATDD--KIIIWD 266
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 47/164 (28%), Positives = 75/164 (45%)
Query: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
+CI F P SGS D +KIWDI+ C HT HT VN + +PDG SGG
Sbjct: 160 SCIR--FSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGG 217
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET---FEL 219
+D LW+L++GK L+ + I + F P+++ L+ + D+ + + L E+
Sbjct: 218 KDTFACLWELSSGKPLYKLEARN-TINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEI 276
Query: 220 IGS-------------AGPETSGVRCLTFNPDGRTLLCGLHESL 250
+ + P+ L ++ DG L G ++ L
Sbjct: 277 VPEVKEQAFDSKKKKESKPKAPACLSLAWSADGSVLYAGYNDGL 320
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 314 (115.6 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 81/242 (33%), Positives = 112/242 (46%)
Query: 7 YKLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWA-IGKP--NAILSLSGHTSGI 62
YKL F H V+C+ + L++ ED LW +G P N +L+ SGHT +
Sbjct: 350 YKLNNIFRLHELPVSCI-VMHPCRDYLISCSEDR---LWKMVGLPQGNVLLTGSGHTDWL 405
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
F S +A + TIKLWDL + + TL GH S +H G+F AS SLD
Sbjct: 406 SGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLD 465
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
KIWD+ + C +T GHT VN+I F P +++ D T+ +WD GK
Sbjct: 466 MTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLY 525
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGR 240
H + F P ++A+ A K WD I S GP +SG + F+ GR
Sbjct: 526 GHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGP-SSGNE-VNFDQSGR 583
Query: 241 TL 242
L
Sbjct: 584 VL 585
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 52/178 (29%), Positives = 82/178 (46%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
D +W + +L GHT ++S+ F S +L+ A +A T+ +WD K ++
Sbjct: 465 DMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTA-SADKTLSVWDARTGKCEQS 523
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK-GHTRGVNAIRFTPDG 155
L GH + F P G AS K+WD RK I + G + G N + F G
Sbjct: 524 LYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSG-NEVNFDQSG 582
Query: 156 RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF-HPHEFLLATGSADRTVKFW 212
R + + + L DL +G++ H HE ++ + F H E L + GS D T++ W
Sbjct: 583 RVLAQASANGIIHLLDLKSGQI-HKLVGHESEVHSVVFSHLGENLYSGGS-DGTIRLW 638
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ +VN ++ S +L+T D +++W SL GH ++ +F ++
Sbjct: 485 HTDSVNSIEFF-PFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHII 543
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A+ A G KLWD + + ++ S+ V+F G A S + + + D+ K G
Sbjct: 544 ASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDL-KSG 602
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
IH GH V+++ F+ G + SGG D T++LW
Sbjct: 603 QIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 150 (57.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 65/280 (23%), Positives = 116/280 (41%)
Query: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
+CI + HP ++ S S D K+ + + + T GHT ++ F P G + +
Sbjct: 364 SCIVM--HPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSS 421
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D+T+KLWDL G+ + H + +H +A+ S D T K WD+ + +
Sbjct: 422 GDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYT 481
Query: 223 AGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLN-VHEGK 280
T V + F P LL ++L V+ +C ++ ++D G
Sbjct: 482 LYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGH 541
Query: 281 LLGCSYNQSCVGVWVVDISRIEPYT---IG--SVTRVN----GLSESKSSASGNLSVLNE 331
++ + +W D ++ P +G S VN G +++SA+G + +L+
Sbjct: 542 IIASCDARGVTKLW--DFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDL 599
Query: 332 NSAKASLGKLSVSQNSDPLVKETKSLGRLSVSQNSDPLLK 371
S + + KL V S+ LG S SD ++
Sbjct: 600 KSGQ--IHKL-VGHESEVHSVVFSHLGENLYSGGSDGTIR 636
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 78/253 (30%), Positives = 119/253 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLSGHTSGID--SVSF 67
HS V L ++ +L++G D + LW + + + A L+GH+ + ++SF
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF 73
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
DS L A+ TI+LWDLE+ + GH S+ +SV P SGS D +KI
Sbjct: 74 DSHYALSASW--DKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKI 131
Query: 128 WDIRKKGCIHTYK--GHTRGVNAIRFTP--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
W+I C +T GH+ V+ +RF+P D VS G D VK+WDL L
Sbjct: 132 WNIIGN-CKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYG 190
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H G + + P L A+G D T+ WDL + S + + + L F+P+ L
Sbjct: 191 HTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN-INALVFSPNRYWLC 249
Query: 244 CGLHESLKVFSWE 256
S+++F E
Sbjct: 250 AATGSSIRIFDLE 262
Score = 279 (103.3 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 78/261 (29%), Positives = 122/261 (46%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ HS V+ + S L + D + LW + K GHTS + SVS
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYAL-SASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISP 115
Query: 70 SEVLVAAGAASGTIKLWDL-EEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLK 126
V +G+ TIK+W++ K T GH +C+ +P F S D +K
Sbjct: 116 DNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVK 175
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
+WD+ ++ GHT V+A+ +PDG SGG D T+ LWDL L+ + +
Sbjct: 176 VWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEA-KA 234
Query: 187 QIQCIDFHPHEFLL--ATGSADRTVKFWDLETFELIGS-------AGPETSGVRC--LTF 235
I + F P+ + L ATGS+ ++ +DLET E + G ++S C LT+
Sbjct: 235 NINALVFSPNRYWLCAATGSS---IRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTW 291
Query: 236 NPDGRTLLCGLHESLKVFSWE 256
+PDG+TL G ++L + W+
Sbjct: 292 SPDGQTLFSGWTDNL-IRVWQ 311
Score = 271 (100.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 71/205 (34%), Positives = 106/205 (51%)
Query: 54 SLSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKI-----VRTLTGHR---SN 103
+L GH+ + S+S ++ ++L++ G+ +I LW+L + R LTGH S+
Sbjct: 10 TLEGHSGWVTSLSTAPENPDILLS-GSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSD 68
Query: 104 C-ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
C +S D H + S S D +++WD+ K C H + GHT V ++ +PD R VVSG
Sbjct: 69 CALSFDSH----YALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGS 124
Query: 163 EDNTVKLWDLTAG-KLLHDFKCHEGQIQCIDFHPHEFLLATGSA--DRTVKFWDLETFEL 219
D T+K+W++ K H + C+ F P+ L SA D+ VK WDLETF L
Sbjct: 125 RDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSL 184
Query: 220 IGSAGPETSGVRCLTFNPDGRTLLC 244
S T V +T +PDG LC
Sbjct: 185 RTSHYGHTGYVSAVTISPDGS--LC 207
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/169 (24%), Positives = 82/169 (48%)
Query: 15 HSSTVNCLKIGRKSSRV-LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
HS V+C++ + V+ G D V +W + + S GHT + +V+ L
Sbjct: 147 HSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSL 206
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
A+G GT+ LWDL E+ + +L ++N ++ F P ++ + ++++I+D+ +
Sbjct: 207 CASGGRDGTLMLWDLNESTHLYSLEA-KANINALVFSP-NRYWLCAATGSSIRIFDLETQ 264
Query: 134 GCIHTYKGHTRGVN---------AIRFTPDGRWVVSGGEDNTVKLWDLT 173
+ GV ++ ++PDG+ + SG DN +++W +T
Sbjct: 265 EKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNLIRVWQVT 313
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 291 (107.5 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 59/216 (27%), Positives = 114/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K AI + +T + +V+F
Sbjct: 144 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTF 202
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D V +WD T+ ++L+
Sbjct: 263 WDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY 322
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G I + FHP E ++ + S+D+ + +++
Sbjct: 323 KLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 66 HEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK I T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRC-SWSPDGSK 300
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 301 IAAGSADRF-VYVWD 314
Score = 252 (93.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 65/241 (26%), Positives = 114/241 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 109 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + ++T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ ++C + P +A GSADR V WD + ++ + + F+PD +
Sbjct: 287 --KNLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 243 L 243
L
Sbjct: 344 L 344
Score = 205 (77.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 62/241 (25%), Positives = 105/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW++ + TL GH + + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + R+ NVH E LL CS+
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VRIFQGNVHNFEKNLLRCSW 294
Query: 287 N 287
+
Sbjct: 295 S 295
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 305 (112.4 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 67/234 (28%), Positives = 113/234 (48%)
Query: 7 YKLQEFV-AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL + H V C+ I + +TG D + +W + +L+GH + V
Sbjct: 129 WKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDV 188
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ + + + T+K WDLE+ +I+R GH S +V HP + A+ D+ +
Sbjct: 189 AVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVI 248
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+WD+R + + T GH +N ++ TP VVS D TV+LWD+ AGK + H+
Sbjct: 249 KLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHK 308
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV-RCLTFNPD 238
++ HP EF +A+ D ++ W L L+ + E +G+ L+ N D
Sbjct: 309 RSVRATALHPKEFSVASACTD-DIRSWGLAEGSLLTNFESEKTGIINTLSINQD 361
Score = 233 (87.1 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 75/258 (29%), Positives = 113/258 (43%)
Query: 8 KLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
KL+ +A H TV + + + L + ED V W + K I GH SG+ +VS
Sbjct: 173 KLKTTLAGHVMTVRDVAVSDRHP-YLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVS 231
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
+ L+A IKLWD+ V TL GH+ V P S S D ++
Sbjct: 232 IHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVR 291
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE- 185
+WD+ + H R V A P V S D+ ++ W L G LL +F+ +
Sbjct: 292 LWDVVAGKTMKVLTHHKRSVRATALHPKEFSVASACTDD-IRSWGLAEGSLLTNFESEKT 350
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWD---------LETFELIGSAGPETSGVRCLTFN 236
G I + + + L A G + + F+D L T E++GS E S V C TF+
Sbjct: 351 GIINTLSINQDDVLFAGGD-NGVLSFYDYKSGHKYQSLATREMVGSLEGERS-VLCSTFD 408
Query: 237 PDGRTLLCG-LHESLKVF 253
G L+ G +S+K++
Sbjct: 409 KTGLRLITGEADKSIKIW 426
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 59/216 (27%), Positives = 114/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K AI + +T + +V+F
Sbjct: 144 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTF 202
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D V +WD T+ ++L+
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY 322
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G I + FHP E ++ + S+D+ + +++
Sbjct: 323 KLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 66 HEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK I T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 300
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 301 IAAGSADRF-VYVWD 314
Score = 252 (93.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 65/241 (26%), Positives = 114/241 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 109 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + ++T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ ++C + P +A GSADR V WD + ++ + + F+PD +
Sbjct: 287 --KNLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 243 L 243
L
Sbjct: 344 L 344
Score = 202 (76.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW++ + TL GH + + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + ++ NVH E LL CS+
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VKIFQGNVHNFEKNLLRCSW 294
Query: 287 N 287
+
Sbjct: 295 S 295
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 59/216 (27%), Positives = 114/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K AI + +T + +V+F
Sbjct: 144 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTF 202
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D V +WD T+ ++L+
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY 322
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G I + FHP E ++ + S+D+ + +++
Sbjct: 323 KLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 66 HEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK I T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 300
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 301 IAAGSADRF-VYVWD 314
Score = 252 (93.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 65/241 (26%), Positives = 114/241 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 109 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + ++T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ ++C + P +A GSADR V WD + ++ + + F+PD +
Sbjct: 287 --KNLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 343
Query: 243 L 243
L
Sbjct: 344 L 344
Score = 202 (76.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW++ + TL GH + + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + ++ NVH E LL CS+
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VKIFQGNVHNFEKNLLRCSW 294
Query: 287 N 287
+
Sbjct: 295 S 295
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 59/216 (27%), Positives = 114/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K AI + +T + +V+F
Sbjct: 143 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTF 201
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 202 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D V +WD T+ ++L+
Sbjct: 262 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY 321
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G I + FHP E ++ + S+D+ + +++
Sbjct: 322 KLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 65 HEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 181
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK I T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 182 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 299
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 300 IAAGSADRF-VYVWD 313
Score = 251 (93.4 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 64/236 (27%), Positives = 112/236 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 108 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + ++T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPD 238
+ ++C + P +A GSADR V WD + ++ + + F+PD
Sbjct: 286 --KNLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD 338
Score = 202 (76.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW++ + TL GH + + ++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 179 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 237
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + ++ NVH E LL CS+
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VKIFQGNVHNFEKNLLRCSW 293
Query: 287 N 287
+
Sbjct: 294 S 294
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 294 (108.6 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 58/193 (30%), Positives = 101/193 (52%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
K + ++ F HS V CL+ RK L+TG D + +W I + +L+GHT G+
Sbjct: 371 KGTHTIKTFTGHSDGVTCLQFNRK---YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVR 427
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
++ FD+ +++ +G TIK+W+ + + T GH +SVDF + SGS D
Sbjct: 428 ALVFDNQKLI--SGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT--NKSIVSGSADH 483
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF-- 181
+++W + + C +T +GHT VN ++ + S +D T+++WD+ + + + F
Sbjct: 484 TVRVWHVDSRTC-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGG 542
Query: 182 ---KCHEGQIQCI 191
H GQ+QCI
Sbjct: 543 MENNGHIGQVQCI 555
Score = 221 (82.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
++T TGH + F+ ++ +GS DT +KIW I C+ T GHT+GV A+ F
Sbjct: 376 IKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF-- 431
Query: 154 DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
D + ++SGG D+T+K+W+ G+ + ++ HE + +DF + +GSAD TV+ W
Sbjct: 432 DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWH 489
Query: 214 LET 216
+++
Sbjct: 490 VDS 492
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 48/159 (30%), Positives = 73/159 (45%)
Query: 59 TSGIDSVSFDSSEVLVAAGAASGT--IKLWDLEEAKIVR-TLTGHRSNCISVDFHP--FG 113
T+ + S ++ A GA GT I L + + A I R T T +N + P +
Sbjct: 580 TTTTTTTSAAATATATAMGATLGTNNISLPN-DTATINRSTFTPSNNNTATTATTPNSYP 638
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
F + +LD +K+WD+ CI T GH GV +I D ++SG D +K+WDL
Sbjct: 639 THFLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSI--AADTFRIISGAHDRLIKVWDLQ 696
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
GK LH F + + C+ F+ G + VK +
Sbjct: 697 NGKCLHTFS-NNSSVSCVGLSDSRFV--AGLENGEVKMY 732
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 64/261 (24%), Positives = 117/261 (44%)
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
F H + C+ F+ ++L+ TGS D T+K W +++ E + + T GVR L F D +
Sbjct: 379 FTGHSDGVTCLQFN-RKYLM-TGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF--DNQ 434
Query: 241 TLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDIS 299
L+ G L ++KV+++ +C + ++ ++ S + + V VW VD S
Sbjct: 435 KLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHT-VRVWHVD-S 492
Query: 300 RIEPYTI-GSVTRVNGLSESKSSASGNLSVLNENSAKASLGKLSVSQNSDPLVKETKSL- 357
R YT+ G VN + SAS + ++++ NS+ +K +
Sbjct: 493 RT-CYTLRGHTDWVNHVKIH--SASNTIFSASDDTTIRMW-----DMNSNECIKVFGGME 544
Query: 358 --GRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVLSSTGSVPGTPQRVNLN--MGS 413
G + Q P + + + S S +SE + S ++T S T + +G+
Sbjct: 545 NNGHIGQVQCIIPFTYKEELIEDESES-DSENNQNSTTTTTTTSAAATATATAMGATLGT 603
Query: 414 KT-SVVNSTAVVSKRTSTRAN 433
S+ N TA +++ T T +N
Sbjct: 604 NNISLPNDTATINRSTFTPSN 624
Score = 68 (29.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 194 HPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESL-KV 252
+P FL T + D T+K WD+ T + I + GV + D ++ G H+ L KV
Sbjct: 637 YPTHFL--TSALDNTIKLWDVATGKCIRTQFGHIEGVWSIA--ADTFRIISGAHDRLIKV 692
Query: 253 FSWEPIRC 260
+ + +C
Sbjct: 693 WDLQNGKC 700
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 309 (113.8 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 70/246 (28%), Positives = 126/246 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF------DSSEVL-VAAGAA 79
+ S +L+T LW++ +L GH S + V+ D V+ +A+G
Sbjct: 271 EDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGH 330
Query: 80 SGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
G +KLW + + +TGH + +S V FHP G F A+ D++ ++WD+ +K +
Sbjct: 331 DGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLH 390
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
+GH + V+ + + DG +V+GG D ++WDL G+ + + H G + +DF P+ F
Sbjct: 391 QEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGF 450
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPD-GRTLL-CGLHESLKVFS-- 254
+ATGS D T K WDL + + + T+ + + + + G L+ C + K++S
Sbjct: 451 HIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNK 510
Query: 255 -WEPIR 259
W+P++
Sbjct: 511 TWQPLK 516
Score = 268 (99.4 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 54/186 (29%), Positives = 91/186 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S R L T D LW + + +L GH + +S+ S ++ G ++WD
Sbjct: 364 SGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWD 423
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L + + L GH VDF P G A+GS D KIWD+R++ ++T HT ++
Sbjct: 424 LRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLIS 483
Query: 148 AIRFTPD-GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
+++ + G ++V+ D+T K+W + L + H+ ++ +D P+ +AT S D
Sbjct: 484 DVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFD 543
Query: 207 RTVKFW 212
RT K W
Sbjct: 544 RTFKLW 549
Score = 263 (97.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 63/218 (28%), Positives = 100/218 (45%)
Query: 10 QEFVAHSSTVN--CLKIGRKSSR----VLVTGGEDHKVNLWAIGKPNAILSLSGHTSG-I 62
Q H+S V L+ G K+ + +GG D V LW +I ++GH +
Sbjct: 297 QTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRV 356
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
V+F S +A + +LWDLE+ V GH + +H G +G LD
Sbjct: 357 SKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLD 416
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
++WD+R CI +GH V + F+P+G + +G +DNT K+WDL + ++
Sbjct: 417 AFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIP 476
Query: 183 CHEGQIQCIDFHPH--EFLLATGSADRTVKFWDLETFE 218
H I + + FL+ T S D T K W +T++
Sbjct: 477 AHTNLISDVKYQQECGSFLV-TCSYDSTTKIWSNKTWQ 513
Score = 217 (81.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHP 111
+ S G T + S +F L+ + SG KLW + + ++ +TL GH S V P
Sbjct: 254 LCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRP 313
Query: 112 FGEF-------FASGSLDTNLKIWDIRKKGCIHTYKGHT-RGVNAIRFTPDGRWVVSGGE 163
+ ASG D +K+W + I GH V+ + F P GR++ +
Sbjct: 314 GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACY 373
Query: 164 DNTVKLWDLTAG-KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D++ +LWDL ++LH + H + C+ +H +L TG D + WDL T I
Sbjct: 374 DSSWRLWDLEQKTEVLHQ-EGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMF 432
Query: 223 AGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGWSRLSDLNVHE--G 279
V + F+P+G + G ++ K++ + + + +SD+ + G
Sbjct: 433 LEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECG 492
Query: 280 K-LLGCSYNQSCVGVW 294
L+ CSY+ S +W
Sbjct: 493 SFLVTCSYD-STTKIW 507
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 321 (118.1 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 73/209 (34%), Positives = 112/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 460 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 515
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 516 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 572
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 573 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 630
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL+T E I
Sbjct: 631 QFNKN-FVI-TSSDDGTVKLWDLKTGEFI 657
Score = 282 (104.3 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 384 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 438
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 439 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 496
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 497 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 553
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 554 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 587
Score = 260 (96.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 73/259 (28%), Positives = 119/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G+ + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 359 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 416
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 417 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 472
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 473 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 530
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 531 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 588
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 589 LKDNILVSGNAD-STVKIW 606
Score = 247 (92.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 494 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 550
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 551 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 606
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 607 DIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 659
Score = 38 (18.4 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRV 31
TTK KL H S V +G+K +V
Sbjct: 165 TTKMKRKLD----HGSEVRSFSLGKKPCKV 190
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 289 (106.8 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 67/256 (26%), Positives = 125/256 (48%)
Query: 7 YKLQ-EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
YKL H+ +++ K + L T D V +W + +L+GH G++ +
Sbjct: 77 YKLMCTLEGHTKSISSAKFS-PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
++ S V + + T+K++++ +++ +TL GH + +F+P SGS D ++
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
+IWD++ CI T H+ V+A+ F DG + SG D V++WD G+ + E
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 186 GQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFN---PDG 239
+ + F P+ +++LA+ + D T+K WD + + G E S C+ N G
Sbjct: 256 NPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSKGKTLKQYTGHENSKY-CIFANFSVTGG 313
Query: 240 RTLLCGLHESLKVFSW 255
+ ++ G E K++ W
Sbjct: 314 KWIISG-SEDCKIYIW 328
Score = 278 (102.9 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 57/204 (27%), Positives = 105/204 (51%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H++ V C +SS V V+G D V +W + I +L H+ + +VSF+ L+
Sbjct: 170 HNNYVFCCNFNPQSSLV-VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKK 133
A+G+ G +++WD + ++TL + ++ V F P G++ + +LD+ LK+WD K
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 134 GCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ Y GH I F+ G+W++SG ED + +W+L +++ + H +
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Query: 191 IDFHPHEFLLATGSA--DRTVKFW 212
D HP + ++A+G+ D + W
Sbjct: 349 SDCHPVQNIIASGALEPDNKIHIW 372
Score = 273 (101.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 60/183 (32%), Positives = 97/183 (53%)
Query: 75 AAGA-ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
AAGA ASG+ K++ TL GH + S F P G++ + S D +KIW++
Sbjct: 66 AAGASASGSANY------KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM 119
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
C T GH GVN I ++ D R VVS +D T+K++++ ++ K H + C +F
Sbjct: 120 ICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF 179
Query: 194 HPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVF 253
+P L+ +GS D +V+ WD++T I + + V ++FN DG + G ++ L V
Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VR 238
Query: 254 SWE 256
W+
Sbjct: 239 IWD 241
Score = 271 (100.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/233 (27%), Positives = 115/233 (49%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
SR +V+ +D + ++ I +L GH + + +F+ LV +G+ ++++WD+
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ ++TL H +V F+ G ASGS D ++IWD CI T V
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFHPH--EFLLATG 203
++F+P+G+++++ D+T+KLWD + GK L + HE CI +F +++++ G
Sbjct: 261 FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS-G 319
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSW 255
S D + W+L+T E++ T V +P + G L K+ W
Sbjct: 320 SEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 265 (98.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 64/215 (29%), Positives = 99/215 (46%)
Query: 45 AIGKPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
A G N L +L GHT I S F + +A T+K+W+++ RTLTGH+
Sbjct: 71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL 130
Query: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
+ + S S D LKI++I T KGH V F P VVSG
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D +V++WD+ G + H + + F+ L+A+GS D V+ WD + I +
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 223 -AGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSW 255
E V + F+P+G+ +L L +LK++ +
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDF 285
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 289 (106.8 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 67/256 (26%), Positives = 125/256 (48%)
Query: 7 YKLQ-EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
YKL H+ +++ K + L T D V +W + +L+GH G++ +
Sbjct: 77 YKLMCTLEGHTKSISSAKFS-PCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
++ S V + + T+K++++ +++ +TL GH + +F+P SGS D ++
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
+IWD++ CI T H+ V+A+ F DG + SG D V++WD G+ + E
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 186 GQ-IQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGS-AGPETSGVRCLTFN---PDG 239
+ + F P+ +++LA+ + D T+K WD + + G E S C+ N G
Sbjct: 256 NPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSKGKTLKQYTGHENSKY-CIFANFSVTGG 313
Query: 240 RTLLCGLHESLKVFSW 255
+ ++ G E K++ W
Sbjct: 314 KWIISG-SEDCKIYIW 328
Score = 278 (102.9 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 57/204 (27%), Positives = 105/204 (51%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H++ V C +SS V V+G D V +W + I +L H+ + +VSF+ L+
Sbjct: 170 HNNYVFCCNFNPQSSLV-VSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLI 228
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKK 133
A+G+ G +++WD + ++TL + ++ V F P G++ + +LD+ LK+WD K
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKG 288
Query: 134 GCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ Y GH I F+ G+W++SG ED + +W+L +++ + H +
Sbjct: 289 KTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA 348
Query: 191 IDFHPHEFLLATGSA--DRTVKFW 212
D HP + ++A+G+ D + W
Sbjct: 349 SDCHPVQNIIASGALEPDNKIHIW 372
Score = 273 (101.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 60/183 (32%), Positives = 97/183 (53%)
Query: 75 AAGA-ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
AAGA ASG+ K++ TL GH + S F P G++ + S D +KIW++
Sbjct: 66 AAGASASGSANY------KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHM 119
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
C T GH GVN I ++ D R VVS +D T+K++++ ++ K H + C +F
Sbjct: 120 ICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF 179
Query: 194 HPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVF 253
+P L+ +GS D +V+ WD++T I + + V ++FN DG + G ++ L V
Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL-VR 238
Query: 254 SWE 256
W+
Sbjct: 239 IWD 241
Score = 271 (100.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 63/233 (27%), Positives = 115/233 (49%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
SR +V+ +D + ++ I +L GH + + +F+ LV +G+ ++++WD+
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
+ ++TL H +V F+ G ASGS D ++IWD CI T V
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFHPH--EFLLATG 203
++F+P+G+++++ D+T+KLWD + GK L + HE CI +F +++++ G
Sbjct: 261 FVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS-G 319
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSW 255
S D + W+L+T E++ T V +P + G L K+ W
Sbjct: 320 SEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 265 (98.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 64/215 (29%), Positives = 99/215 (46%)
Query: 45 AIGKPNAIL--SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS 102
A G N L +L GHT I S F + +A T+K+W+++ RTLTGH+
Sbjct: 71 ASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL 130
Query: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
+ + S S D LKI++I T KGH V F P VVSG
Sbjct: 131 GVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGS 190
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D +V++WD+ G + H + + F+ L+A+GS D V+ WD + I +
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 223 -AGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSW 255
E V + F+P+G+ +L L +LK++ +
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDF 285
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 289 (106.8 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 62/217 (28%), Positives = 111/217 (51%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG 61
T K A L+ H++ V C +SS V V+G D V +W + + +L H+
Sbjct: 152 TVKMAKTLK---GHTNYVFCCNFNPQSSLV-VSGSFDESVRIWDVRTGMCVKTLPAHSDP 207
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGS 120
+ +VSF+ L+ +G+ G +++WD + V+TL + ++ V F P G++ S +
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSN 267
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAI--RFT-PDGRWVVSGGEDNTVKLWDLTAGKL 177
LD LK+WD K + Y+GH I F+ G+W++SG ED + +W+L ++
Sbjct: 268 LDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEV 327
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSA--DRTVKFW 212
+ + H + D HP + ++A+G+ D T++ W
Sbjct: 328 VQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 287 (106.1 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 61/254 (24%), Positives = 119/254 (46%)
Query: 7 YKLQEFV-AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
YKL + H+ +++ +K + L T D V +W + + +L+GH G++
Sbjct: 69 YKLISTIEGHTKSISAVKFS-PCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDF 127
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
++ + + + T+K++++ K+ +TL GH + +F+P SGS D ++
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESV 187
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
+IWD+R C+ T H+ V+A+ F DG + SG D V++WD G+ + E
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDE 247
Query: 186 GQ-IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN---PDGRT 241
+ + F P+ + + + D T+K WD + + + C+ N G+
Sbjct: 248 NPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKW 307
Query: 242 LLCGLHESLKVFSW 255
++ G E K++ W
Sbjct: 308 IISG-SEDCKIYVW 320
Score = 277 (102.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 63/225 (28%), Positives = 112/225 (49%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S+ +VT +D + ++ + +L GHT+ + +F+ LV +G+ ++++WD+
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDV 192
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-KGHTRGVN 147
V+TL H +V F+ G SGS D ++IWD C+ T V
Sbjct: 193 RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVA 252
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI--DFHPH--EFLLATG 203
++F+P+G++++S DNT+KLWD GK L ++ HE CI +F +++++ G
Sbjct: 253 FVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIIS-G 311
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
S D + W+L+T E++ S T V +P + G E
Sbjct: 312 SEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALE 356
Score = 264 (98.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 49/165 (29%), Positives = 88/165 (53%)
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
K++ T+ GH + +V F P G+F + S D +KIW++ C T GH GVN +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
+ D + +V+ +D T+K++++ K+ K H + C +F+P L+ +GS D +V+
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ T + + + V ++FN DG + G ++ L V W+
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGL-VRIWD 233
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 321 (118.1 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 73/209 (34%), Positives = 112/209 (53%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV C+ + K RV V+G D + +W I + L GH + + V +D V+
Sbjct: 465 HTSTVRCMHLHEK--RV-VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV- 520
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+GA +K+WD E + TL GH + S+ F G SGSLDT++++WD+
Sbjct: 521 -SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGN 577
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQIQCI 191
CIHT GH + + + +VSG D+TVK+WD+ G+ L + H+ + C+
Sbjct: 578 CIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL 635
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ + F++ T S D TVK WDL+T E I
Sbjct: 636 QFNKN-FVI-TSSDDGTVKLWDLKTGEFI 662
Score = 282 (104.3 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 65/215 (30%), Positives = 110/215 (51%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ CL+ +R+ V+G +D+ + +W+ + +L GHT G+ S + ++ +G+
Sbjct: 389 ITCLQFC--GNRI-VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGS 443
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
T+K+W+ E + + TL GH S + H + SGS D L++WDI C+H
Sbjct: 444 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHV 501
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
GH V +++ DGR VVSG D VK+WD LH + H ++ + F
Sbjct: 502 LMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIH- 558
Query: 199 LLATGSADRTVKFWDLETFELIGS-AGPE--TSGV 230
+ +GS D +++ WD+ET I + G + TSG+
Sbjct: 559 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 592
Score = 260 (96.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 73/259 (28%), Positives = 119/259 (45%)
Query: 39 HKVNL-WAIGKPNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
H+++ W G+ + L GH I + F + ++ +G+ T+K+W K +RT
Sbjct: 364 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIV--SGSDDNTLKVWSAVTGKCLRT 421
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH S SGS D LK+W+ CIHT GHT V + +
Sbjct: 422 LVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K 477
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
VVSG D T+++WD+ G+ LH H ++C+ + + +G+ D VK WD ET
Sbjct: 478 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPET 535
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLN 275
+ + T+ V L F DG ++ G L S++V+ E C + S S +
Sbjct: 536 ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME 593
Query: 276 VHEGKLLGCSYNQSCVGVW 294
+ + L+ + + S V +W
Sbjct: 594 LKDNILVSGNAD-STVKIW 611
Score = 247 (92.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 53/175 (30%), Positives = 92/175 (52%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L + H + V C++ R +V+G D V +W + +L GHT+ + S+ FD
Sbjct: 499 LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD 555
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V +G+ +I++WD+E + TLTGH+S ++ SG+ D+ +KIW
Sbjct: 556 G--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIW 611
Query: 129 DIRKKGCIHTYKG---HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
DI+ C+ T +G H V ++F + +V++ +D TVKLWDL G+ + +
Sbjct: 612 DIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFIRN 664
Score = 38 (18.4 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRV 31
TTK KL H S V +G+K +V
Sbjct: 170 TTKMKRKLD----HGSEVRSFSLGKKPCKV 195
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 277 (102.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 57/196 (29%), Positives = 97/196 (49%)
Query: 44 WAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN 103
W I +P SL+GH + I V F L+ + + TI++WD E + R+L GH +
Sbjct: 94 W-IPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDS 152
Query: 104 CISVDFHPFGEFFASGSLDTNLKIWDIRKK-GCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
V F G+ AS S D ++K+WD ++ CI T GH V+++ F P G +V+S
Sbjct: 153 VQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSAS 212
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D T+K+W++ G + + H ++ + H + AT S D+T++ W + +
Sbjct: 213 RDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVE 272
Query: 223 AGPETSGVRCLTFNPD 238
V C+ + P+
Sbjct: 273 LRDHEHTVECIAWAPE 288
Score = 261 (96.9 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 55/177 (31%), Positives = 92/177 (51%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
++V+ ED + +W SL GHT + V+FD+ L+A+ +A +IKLWD ++
Sbjct: 122 LMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQ 181
Query: 91 A-KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
+ + ++T+ GH N SV F P G++ S S D +K+W++ C+ TY GH V +
Sbjct: 182 SYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMV 241
Query: 150 RFTPDGRWVVSGGEDNTVKLWDLTAGKLLH-DFKCHEGQIQCIDFHPHEFLLATGSA 205
R +G + D T+++W LT K + + HE ++CI + P A A
Sbjct: 242 RVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEA 297
Score = 209 (78.6 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
H G F ASGS D ++IWD+ C+ T GH V + F P G+++VS +D T+++
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHP-HEFLLATGSADRTVKFWD 213
WDL + + H+ IDFH H ++++ GS D+TVK W+
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVIS-GSVDQTVKVWE 409
Score = 201 (75.8 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 42/135 (31%), Positives = 68/135 (50%)
Query: 38 DHKVNLWAIG-KPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRT 96
DH+ + I P A S +G D+ +A+G+ TI++WD+ + T
Sbjct: 275 DHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLT 334
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GH + + FHP G++ S S D +++WD+R K C+ T H +I F
Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHP 394
Query: 157 WVVSGGEDNTVKLWD 171
+V+SG D TVK+W+
Sbjct: 395 YVISGSVDQTVKVWE 409
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 32/109 (29%), Positives = 57/109 (52%)
Query: 23 KIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGT 82
K G L +G D + +W + +L+LSGH + + ++F + + + T
Sbjct: 303 KKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKT 362
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
I++WDL + ++TL H+ C S+DFH + SGS+D +K+W+ R
Sbjct: 363 IRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 120 (47.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDL 214
G ++ SG D T+++WD++ G L H+ ++ + FHP L + S D+T++ WDL
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Score = 86 (35.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 26/104 (25%), Positives = 51/104 (49%)
Query: 194 HPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKV 252
H FL A+GS D+T++ WD+ + + + VR L F+P G+ L+ + +++V
Sbjct: 307 HQGPFL-ASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 253 FSWEPIRCHDAVDVGWSRLSDLNVHEGK--LLGCSYNQSCVGVW 294
+ RC + + ++ H+ ++ S +Q+ V VW
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT-VKVW 408
Score = 55 (24.4 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 12/75 (16%), Positives = 30/75 (40%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y ++ + H V +++ + S + T D + +W + + L H ++ ++
Sbjct: 226 YCVKTYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIA 284
Query: 67 FDSSEVLVAAGAASG 81
+ A A+G
Sbjct: 285 WAPEAAASAINEAAG 299
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 58/216 (26%), Positives = 114/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K A+ + +T + +V+F
Sbjct: 144 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTF 202
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D V +WD T+ ++L+
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLY 322
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G I + FHP E ++ + S+D+ + +++
Sbjct: 323 KLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 271 (100.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 69/255 (27%), Positives = 120/255 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 66 HEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK + T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 183 RKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 300
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 301 IAAGSADRF-VYVWD 314
Score = 252 (93.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 66/241 (27%), Positives = 114/241 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 109 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + V+T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ ++C + P +A GSADR V WD + ++ + + F+PD +
Sbjct: 287 --KNLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPII 343
Query: 243 L 243
L
Sbjct: 344 L 344
Score = 201 (75.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW++ + TL GH + + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 180 WDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + ++ NVH E LL CS+
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VKIFQGNVHNFEKNLLRCSW 294
Query: 287 N 287
+
Sbjct: 295 S 295
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 288 (106.4 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 58/216 (26%), Positives = 113/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K A+ + +T + +V+F
Sbjct: 170 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTF 228
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D ++I
Sbjct: 229 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRI 288
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + G D V +WD T+ ++L+
Sbjct: 289 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILY 348
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G + + FHP E ++ + S+D+ + +++
Sbjct: 349 KLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
Score = 265 (98.3 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 68/255 (26%), Positives = 119/255 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 92 HEGEVYCCKF-HPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 208
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK + T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 209 RKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 267
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 268 LSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 326
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 327 IAGGSADRF-VYVWD 340
Score = 252 (93.8 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 67/241 (27%), Positives = 114/241 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 135 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 193
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + V+T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 194 VCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 253 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFE 312
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ ++C + P +A GSADR V WD + ++ V L F+P+ +
Sbjct: 313 --KNLLRC-SWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 243 L 243
L
Sbjct: 370 L 370
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 67/268 (25%), Positives = 115/268 (42%)
Query: 25 GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIK 84
G+ S+ L+ G +L A P I+ LSGH + F +A+ I
Sbjct: 64 GQPSTGALLQSGPPRCSSLQA---P--IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLIL 118
Query: 85 LWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
LW++ + TL GH + + ++ G S S D + +WD + KGHT
Sbjct: 119 LWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT 178
Query: 144 RGVNAIRFTPDG-RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLAT 202
VN+ G + V +G +D TVKLWD+ + F+ + Q+ + F+ + +
Sbjct: 179 SFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIIS 237
Query: 203 GSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCH 261
G D +K WDL +L + V L+ + +G LL + +++++ P
Sbjct: 238 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPK 297
Query: 262 DAVDVGWSRLSDLNVH--EGKLLGCSYN 287
+ ++ NVH E LL CS++
Sbjct: 298 ERC----VKIFQGNVHNFEKNLLRCSWS 321
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 287 (106.1 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 54/214 (25%), Positives = 108/214 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ F H + VN ++ R+ ++L +G +D + +W K +A +L + +V F
Sbjct: 134 RRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGD 192
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ V +G +K+WD+ + ++ L GH + P G+F + ++D L++WD
Sbjct: 193 TGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWD 252
Query: 130 IRK----KGCIHTYKGHTRGV--NAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
+R + C+ ++GH N +R ++P + SG D V +WD+ ++L+
Sbjct: 253 VRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKL 312
Query: 182 KCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G + +DF P E L+ +GS+D+T+ +++
Sbjct: 313 PGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 242 (90.2 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 60/224 (26%), Positives = 105/224 (46%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS-SEVLVAAGAASGTIKLWDLEE 90
+ T D + W I GH + ++SV + L+ +G+ TIK+WD +
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
TL +V F GE SG +D +KIWDIRK+ +H +GH+ + +
Sbjct: 173 KHAAHTLESP-FQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMS 231
Query: 151 FTPDGRWVVSGGEDNTVKLWDL---TAG-KLLHDFKCHEGQ-----IQCIDFHPHEFLLA 201
+P+G ++++ DNT+++WD+ G + + F+ H+ ++C + P +
Sbjct: 232 LSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA-WSPGSDKIT 290
Query: 202 TGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
+GSADR V WD+ T ++ V + F+P +L G
Sbjct: 291 SGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSG 334
Score = 196 (74.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 52/210 (24%), Positives = 96/210 (45%)
Query: 52 ILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDL-EEAKIVRTLTGHRSNCISVDF 109
I+ L GH I + F E+L+++G I +W + E+ + V ++GH + F
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGF-DRQIYIWQVYEDCENVMAMSGHSGAVMEAHF 106
Query: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVV-SGGEDNTVK 168
P G + S D L WDI +KGH VN+++ + G+ ++ SG +D T+K
Sbjct: 107 TPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIK 166
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
+WD H + Q+ + F + +G D VK WD+ ++ +
Sbjct: 167 IWDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSD 225
Query: 229 GVRCLTFNPDGRTLLCG-LHESLKVFSWEP 257
+ ++ +P+G +L + +L+V+ P
Sbjct: 226 TITGMSLSPEGDFILTNAMDNTLRVWDVRP 255
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 75/279 (26%), Positives = 130/279 (46%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKS---SRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
M+T+ + ++ AH + GR S +VTG D V +W L +L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV+ + + A+ + I+LWDLE K ++++ + +V F P ++
Sbjct: 61 EGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKY 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG 175
A+GS + I+ + H+ + + +I ++PDG+++ SG D + ++D+ G
Sbjct: 121 IATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 180
Query: 176 KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTF 235
KLLH + H I+ + F P LL T S D +K +D++ L G+ S V + F
Sbjct: 181 KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAF 240
Query: 236 NPDGRTLLCGLHE-SLKVFSWEPIRC----HDAVDVGWS 269
+PD + + S+KV+ C D D WS
Sbjct: 241 SPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWS 279
Score = 235 (87.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 50/229 (21%), Positives = 105/229 (45%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H V + I + + + + D + LW + I S+ +V+F +
Sbjct: 63 HQLGVVSVNISQNGA-IAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYI 121
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A G+ G + ++ +E K +L +S+ + P G++ ASG++D + I+DI
Sbjct: 122 ATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+HT +GH + ++ F+PD + +V+ +D +K++D+ L H + + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFS 241
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
P + + S+D+++K WD + + + V + +NP G ++
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIV 290
Score = 234 (87.4 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 44/142 (30%), Positives = 78/142 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S +SV F P F S S D ++K+WD + C++T+ H V ++
Sbjct: 221 HANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ P G +VS G+D + ++D
Sbjct: 281 KYNPTGSKIVSAGDDRAIHIYD 302
Score = 136 (52.9 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L H+ + L S++LVT +D + ++ + N +LSGH S + SV+F
Sbjct: 183 LHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFS 241
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ + ++ +IK+WD V T H+ SV ++P G S D + I+
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Query: 129 D 129
D
Sbjct: 302 D 302
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 306 (112.8 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 68/215 (31%), Positives = 111/215 (51%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L H+STV C+ + + +LVTG D + +W + + +L GH + + V FD
Sbjct: 331 LHTLQGHTSTVRCMAM---AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD 387
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V+ +G T+K+W+ + +RTLTGH + S+ F SGSLDT++++W
Sbjct: 388 GTTVV--SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Query: 129 DI-RKKG--CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
D R +G C+ +GHT + ++ G +VS D+ V++WD+ G +H H
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHR 503
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
I + + ++AT S D TVK WD+E LI
Sbjct: 504 SAITSLQWFGRN-MVATSSDDGTVKLWDIERGALI 537
Score = 301 (111.0 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 76/288 (26%), Positives = 131/288 (45%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ C++I VLVTG +D+ + +W I K + +L GHT G+ + + +G+
Sbjct: 259 ITCMQI---HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGS 315
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
T+K+W + ++ TL GH S C+++ G +GS DT L++WD+ +
Sbjct: 316 TDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA----GSILVTGSRDTTLRVWDVESGRHL 371
Query: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH 196
T GH V ++F DG VVSGG D TVK+W+ G+ + H ++ + F
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 197 EFLLATGSADRTVKFWDL---ETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKV 252
++ +GS D +++ WD E E + TS + G L+ C ++V
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRV 487
Query: 253 FSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
+ C + S ++ L ++ S + V +W DI R
Sbjct: 488 WDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW--DIER 533
Score = 253 (94.1 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 66/222 (29%), Positives = 111/222 (50%)
Query: 84 KLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
K W+ L GH + I+ + H + +GS D LK+W I K ++T GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYTLVGH 295
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLAT 202
T GV + + GR++VSG D TVK+W G LLH + H ++C+ +L T
Sbjct: 296 TGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVT 353
Query: 203 GSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCH 261
GS D T++ WD+E+ + + + VRC+ F DG T++ G ++ ++K+++ RC
Sbjct: 354 GSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 262 DAVDVGWSRLSDLNVHEGKLLGCSYN-QSCVGVWVVDISRIE 302
+ +R+ L + + CS + + + VW D +R E
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW--DFTRPE 451
Score = 233 (87.1 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 50/170 (29%), Positives = 87/170 (51%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + V C++ +V+GG D V +W I +L+GH + + S+ F+S +V
Sbjct: 377 HHAAVRCVQF---DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
Query: 75 AAGAASGTIKLWDL---EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+G+ +I++WD E + V L GH S + G S + D+++++WDI
Sbjct: 434 CSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIH 491
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGR-WVVSGGEDNTVKLWDLTAGKLLHD 180
+ C+H GH + ++++ GR V + +D TVKLWD+ G L+ D
Sbjct: 492 EGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRD 539
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 306 (112.8 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 68/215 (31%), Positives = 111/215 (51%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L H+STV C+ + + +LVTG D + +W + + +L GH + + V FD
Sbjct: 331 LHTLQGHTSTVRCMAM---AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFD 387
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ V+ +G T+K+W+ + +RTLTGH + S+ F SGSLDT++++W
Sbjct: 388 GTTVV--SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
Query: 129 DI-RKKG--CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
D R +G C+ +GHT + ++ G +VS D+ V++WD+ G +H H
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHR 503
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
I + + ++AT S D TVK WD+E LI
Sbjct: 504 SAITSLQWFGRN-MVATSSDDGTVKLWDIERGALI 537
Score = 301 (111.0 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 76/288 (26%), Positives = 131/288 (45%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
+ C++I VLVTG +D+ + +W I K + +L GHT G+ + + +G+
Sbjct: 259 ITCMQI---HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGS 315
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
T+K+W + ++ TL GH S C+++ G +GS DT L++WD+ +
Sbjct: 316 TDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA----GSILVTGSRDTTLRVWDVESGRHL 371
Query: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH 196
T GH V ++F DG VVSGG D TVK+W+ G+ + H ++ + F
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 197 EFLLATGSADRTVKFWDL---ETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKV 252
++ +GS D +++ WD E E + TS + G L+ C ++V
Sbjct: 430 RSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRV 487
Query: 253 FSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR 300
+ C + S ++ L ++ S + V +W DI R
Sbjct: 488 WDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW--DIER 533
Score = 253 (94.1 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 66/222 (29%), Positives = 111/222 (50%)
Query: 84 KLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
K W+ L GH + I+ + H + +GS D LK+W I K ++T GH
Sbjct: 238 KNWNANPIMGSAVLRGHEDHVITCMQIHD--DVLVTGSDDNTLKVWCIDKGEVMYTLVGH 295
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLAT 202
T GV + + GR++VSG D TVK+W G LLH + H ++C+ +L T
Sbjct: 296 TGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVT 353
Query: 203 GSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCH 261
GS D T++ WD+E+ + + + VRC+ F DG T++ G ++ ++K+++ RC
Sbjct: 354 GSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 262 DAVDVGWSRLSDLNVHEGKLLGCSYN-QSCVGVWVVDISRIE 302
+ +R+ L + + CS + + + VW D +R E
Sbjct: 412 RTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW--DFTRPE 451
Score = 233 (87.1 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 50/170 (29%), Positives = 87/170 (51%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + V C++ +V+GG D V +W I +L+GH + + S+ F+S +V
Sbjct: 377 HHAAVRCVQF---DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
Query: 75 AAGAASGTIKLWDL---EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
+G+ +I++WD E + V L GH S + G S + D+++++WDI
Sbjct: 434 CSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIH 491
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGR-WVVSGGEDNTVKLWDLTAGKLLHD 180
+ C+H GH + ++++ GR V + +D TVKLWD+ G L+ D
Sbjct: 492 EGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRD 539
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 299 (110.3 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 67/218 (30%), Positives = 110/218 (50%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF-----------DSSEVLVAA 76
+ + TG +V L++I + ++L GHT+ + + + + V +A
Sbjct: 217 NGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLAT 276
Query: 77 GAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCI 136
G A G + LW L + + TL+GH VDFHP G F AS S DT+ ++WD+ K+ +
Sbjct: 277 GGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTEL 336
Query: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH-EGQIQ---CID 192
+GH+RGV A+ F DG + S G+D+ ++WDL G+ + H +G I+ +D
Sbjct: 337 LLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALD 396
Query: 193 FHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
+ + + SAD +K WD+ + G G TS V
Sbjct: 397 WGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAV 434
Score = 156 (60.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 41/141 (29%), Positives = 63/141 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ V C S R L + ED LW + K +L GH+ G+ +VSF+ L+
Sbjct: 300 HTQRV-CRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLL 358
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCI----SVDFHPFGEFFASGSLDTNLKIWDI 130
A+ ++WDL + + L GH I ++D+ G S S D +K WD+
Sbjct: 359 ASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDV 418
Query: 131 RKKGCIHTYKGHTRGVNAIRF 151
RK HT V+ +R+
Sbjct: 419 RKVQRTGGVGAHTSAVSDMRW 439
Score = 137 (53.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 42/152 (27%), Positives = 68/152 (44%)
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW-----------VV 159
P GE A+G+ +K++ I +GHT V+ + + P +
Sbjct: 216 PNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLA 275
Query: 160 SGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET-FE 218
+GG + V LW L+ L H ++ +DFHP LA+ S D + + WD+E E
Sbjct: 276 TGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTE 335
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESL 250
L+ G + GV ++FN DG L +S+
Sbjct: 336 LLLQEG-HSRGVFAVSFNGDGSLLASAGQDSI 366
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F S D + I+ + + GHT V ++ + DGRW+VSGG D TVKLW
Sbjct: 466 GTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWGR 525
Query: 173 TAGK 176
G+
Sbjct: 526 NDGE 529
Score = 80 (33.2 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
G ++VS G D+ V ++ L+ H G + +D + +G DRTVK W
Sbjct: 466 GTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 57 (25.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 198 FLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
FL+++G D V + + + L+ S T V + + DGR ++ G H+
Sbjct: 468 FLVSSGF-DHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHD 517
Score = 50 (22.7 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 506 ENTGSKATEVSSVADRNTFAAIKGSIQGV--SVTERNSKEDIFTVSGKSGTMSMS 558
+ TG S+V+D F + G + GV V E+ + KSGT +S
Sbjct: 422 QRTGGVGAHTSAVSDMRWFKGLDGPLDGVPLGVDEKGQ-----AMPKKSGTFLVS 471
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 76/261 (29%), Positives = 120/261 (45%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ HS +N + I L +G DH V LW + I S GHTS + SVSF
Sbjct: 66 KSLTGHSQAINDVSISSDGLFAL-SGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 70 SEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLK 126
+ + + TIKLW+ L + K T H C+ P S D +K
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
+W+++ +GHT +N + +PDG SGG+D KLWD+ GK L+ +
Sbjct: 185 VWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS- 243
Query: 187 QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS---GVR-C--LTFNPDGR 240
I + F P ++ L + DR ++ W+LE+ +I P GV C LT++ +G+
Sbjct: 244 TINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQ 302
Query: 241 TLLCGLHESLKVFSWEPIRCH 261
L CG + ++ +E ++ H
Sbjct: 303 LLYCGSTDG-NIYVYE-VKKH 321
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 67/239 (28%), Positives = 114/239 (47%)
Query: 30 RVLVTGGEDHKVNLWAIGKPN-------AILSLSGHTSGIDSVSFDSSEVLVAAGAASGT 82
+ +V+ D K+ +W I + A SL+GH+ I+ VS S + +G+ +
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY--K 140
++LWDL + +R+ GH S+ SV F P S S D +K+W+ + C +T +
Sbjct: 96 VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQ 154
Query: 141 GHTRGVNAIRFTPDGRW--VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
HT + +RF+P +VS G D VK+W+L L + + H G + + P
Sbjct: 155 QHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGS 214
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
L A+G D K WD++ + + S ET S + L F+P L +++++ E
Sbjct: 215 LCASGGKDGVAKLWDVKEGKHLYSL--ETGSTINSLCFSPCDYWLCAATDRFIRIWNLE 271
Score = 223 (83.6 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 61/200 (30%), Positives = 99/200 (49%)
Query: 57 GHTSGIDSVSFDSSEVLVAAGAASGTIKL--WDL----EEAKI---VRTLTGHRSNCISV 107
GH+ + SVS + L +AS KL W++ + +I ++LTGH V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTV 167
G F SGS D ++++WD+ I ++ GHT V ++ F+PD R +VS D T+
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 168 KLWDLTAG-KLLHDFKCHEGQIQCIDFHP--HEFLLATGSADRTVKFWDLETFELIGSAG 224
KLW+ A K + H I C+ F P ++ ++ + D+ VK W+L+ +L +
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 225 PETSGVRCLTFNPDGRTLLC 244
T + +T +PDG LC
Sbjct: 199 GHTGVLNTVTISPDGS--LC 216
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 284 (105.0 bits), Expect = 7.3e-24, P = 7.3e-24
Identities = 76/261 (29%), Positives = 120/261 (45%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ HS +N + I L +G DH V LW + I S GHTS + SVSF
Sbjct: 66 KSLTGHSQAINDVSISSDGLFAL-SGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 70 SEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLK 126
+ + + TIKLW+ L + K T H C+ P S D +K
Sbjct: 125 DNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVK 184
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
+W+++ +GHT +N + +PDG SGG+D KLWD+ GK L+ +
Sbjct: 185 VWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGS- 243
Query: 187 QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS---GVR-C--LTFNPDGR 240
I + F P ++ L + DR ++ W+LE+ +I P GV C LT++ +G+
Sbjct: 244 TINSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQ 302
Query: 241 TLLCGLHESLKVFSWEPIRCH 261
L CG + ++ +E ++ H
Sbjct: 303 LLYCGSTDG-NIYVYE-VKKH 321
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 67/239 (28%), Positives = 114/239 (47%)
Query: 30 RVLVTGGEDHKVNLWAIGKPN-------AILSLSGHTSGIDSVSFDSSEVLVAAGAASGT 82
+ +V+ D K+ +W I + A SL+GH+ I+ VS S + +G+ +
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHS 95
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY--K 140
++LWDL + +R+ GH S+ SV F P S S D +K+W+ + C +T +
Sbjct: 96 VRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQ 154
Query: 141 GHTRGVNAIRFTPDGRW--VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
HT + +RF+P +VS G D VK+W+L L + + H G + + P
Sbjct: 155 QHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGS 214
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
L A+G D K WD++ + + S ET S + L F+P L +++++ E
Sbjct: 215 LCASGGKDGVAKLWDVKEGKHLYSL--ETGSTINSLCFSPCDYWLCAATDRFIRIWNLE 271
Score = 223 (83.6 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 61/200 (30%), Positives = 99/200 (49%)
Query: 57 GHTSGIDSVSFDSSEVLVAAGAASGTIKL--WDL----EEAKI---VRTLTGHRSNCISV 107
GH+ + SVS + L +AS KL W++ + +I ++LTGH V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTV 167
G F SGS D ++++WD+ I ++ GHT V ++ F+PD R +VS D T+
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 168 KLWDLTAG-KLLHDFKCHEGQIQCIDFHP--HEFLLATGSADRTVKFWDLETFELIGSAG 224
KLW+ A K + H I C+ F P ++ ++ + D+ VK W+L+ +L +
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 225 PETSGVRCLTFNPDGRTLLC 244
T + +T +PDG LC
Sbjct: 199 GHTGVLNTVTISPDGS--LC 216
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 292 (107.8 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 69/265 (26%), Positives = 127/265 (47%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
++ + ED + +W +L GHT ++ ++ D++ + + ++ +IKLWD +
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ 179
Query: 91 A-KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
+++L GH SV F P G+F S S D +K WDI C++T++GH V I
Sbjct: 180 TYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMI 239
Query: 150 RFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHE------------ 197
R + DG S D TV +W + HE ++C+++ P
Sbjct: 240 RISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEG 299
Query: 198 ---FLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVF 253
+L +GS DR++K W++ T +++ + + VR L F+P G+ L+ + +L+V+
Sbjct: 300 NSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVW 359
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVHE 278
RC A++ +S + H+
Sbjct: 360 ELSAQRCMKAIEAHEHFVSTVAFHQ 384
Score = 266 (98.7 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 62/198 (31%), Positives = 98/198 (49%)
Query: 44 WAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS- 102
W I +P L+GH I V F ++A+ + TIK+WD E ++ RTL GH
Sbjct: 92 W-IPRPPETQKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDA 150
Query: 103 -NCISVDFHPFGEFFASGSLDTNLKIWDIRKK-GCIHTYKGHTRGVNAIRFTPDGRWVVS 160
N I++D G+ S S D ++K+WD + C+ + KGH V+++ F P G +V+S
Sbjct: 151 VNDIAID--AAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLS 208
Query: 161 GGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
D+T+K WD++ G ++ F+ H ++ I L A+ S D+TV W T
Sbjct: 209 ASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAK 268
Query: 221 GSAGPETSGVRCLTFNPD 238
V C+ + PD
Sbjct: 269 LVLRDHEHAVECVEWAPD 286
Score = 212 (79.7 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 52/220 (23%), Positives = 92/220 (41%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H TV+ + VL + DH + W I + + GH + +
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVL-SASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS 242
Query: 69 SSEVLVAAGAASGTIKLWDL--EEAKIVRTLTGHRSNCIS----------VDFHPFGE-- 114
+ L A+ + T+ +W + AK+V H C+ P G
Sbjct: 243 NDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNST 302
Query: 115 -FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
SGS D ++K W+I + T H V + F P G++++S +D T+++W+L+
Sbjct: 303 HILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELS 362
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
A + + + HE + + FH + TGS D + K W+
Sbjct: 363 AQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWE 402
Score = 210 (79.0 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 54/162 (33%), Positives = 75/162 (46%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
LTGHR V FHP AS S D +K+WD T KGHT VN I G+
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 157 WVVSGGEDNTVKLWDL-TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+VS D ++KLWD L K HE + + F P + + S D T+K WD+
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 216 TFELIGSAGPETSGVRCLTFNPDGRTLLCG--LHESLKVFSW 255
T + + VR + + DG TL L +++ V+S+
Sbjct: 222 TGYCVYTFRGHNDWVRMIRISNDG-TLFASASLDQTVTVWSF 262
Score = 138 (53.6 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 24/104 (23%), Positives = 51/104 (49%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S+ +L +G D + W I + + +L H + + ++F + + A T+++W+
Sbjct: 301 STHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWE 360
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
L + ++ + H +V FH F +GS+D + K+W+ R
Sbjct: 361 LSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 297 (109.6 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 65/219 (29%), Positives = 105/219 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + +GH + F
Sbjct: 88 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 147
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
LVA G SG +K+W +E + V + + +++HP +G+ D N +W +
Sbjct: 148 TLVATGDMSGLLKVWQVETKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 205
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQI 188
C T++G R PDG+ V G ED T+++WDL G +H K H+G +
Sbjct: 206 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPL 264
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
C+ + L+ TGS D K T +++G PET
Sbjct: 265 TCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPET 303
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 43/207 (20%), Positives = 84/207 (40%)
Query: 47 GKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
G ++ ++ + H++ + VS D + L G +W L + +++ GH+ +
Sbjct: 80 GPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVT 139
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
F A+G + LK+W + K + +++ + + + P +++G D
Sbjct: 140 CAGFSHDSTLVATGDMSGLLKVWQVETKEEVWSFEAGD--LEWMEWHPRAPVLLAGTADG 197
Query: 166 TVKLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFLLATGSADRTVKFWDLETFELI-- 220
+W + G D K +G C P G D T++ WDL+ I
Sbjct: 198 NTWMWKVPNG----DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHV 253
Query: 221 --GSAGPETSGVRCLTFNPDGRTLLCG 245
G+ G + + C+ N DG +L G
Sbjct: 254 LKGTEGHQ-GPLTCVATNQDGSLILTG 279
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 301 (111.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 70/255 (27%), Positives = 114/255 (44%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H+ V + + KS+ TG D+ + +W + ++L+GH S I +
Sbjct: 197 WKLMRVISGHTGWVRAIAVD-KSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGL 255
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
S + + + WDLE K VR GHR SV HP + SG D +
Sbjct: 256 EVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCV 315
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WD+R + I KGH + +++ V+SG D TVKLWDL G H+
Sbjct: 316 RVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHK 375
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
++ + H E+ ATG+AD +K W I + S + + N D + G
Sbjct: 376 KGVRSMVIHEKEYSFATGAADN-IKQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGG 434
Query: 246 LHESLKVFSWEPIRC 260
+ S+ + W+ C
Sbjct: 435 DNGSISFWDWKTGYC 449
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/190 (30%), Positives = 86/190 (45%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
VL +GG D+ V +W + I + GH I S+ +++ V +G+ T+KLWDL
Sbjct: 305 VLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLAT 364
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
TLT H+ S+ H FA+G+ D N+K W I GH +NA+
Sbjct: 365 GTSAATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHNSIINAMA 423
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH------EGQIQCID--FHPHEFLLAT 202
D +VSGG++ ++ WD G + EG+ D F L T
Sbjct: 424 LNADNV-LVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEAGIFDMAFDKTGSRLIT 482
Query: 203 GSADRTVKFW 212
AD+T+KF+
Sbjct: 483 CEADKTIKFY 492
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 57/216 (26%), Positives = 114/216 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ ++ TG +D V LW I K ++ + +T + SV+F
Sbjct: 133 RVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTF 191
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K++ ++ GH + + G + S S+D ++++
Sbjct: 192 NDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRV 251
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WDIR K+ C+ ++G H N +R ++ DG + +G D V +WD T ++++
Sbjct: 252 WDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVY 311
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
H G + + FHP E ++ +GS+D+ + +++
Sbjct: 312 KLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 266 (98.7 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 58/207 (28%), Positives = 101/207 (48%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K + L + G D + +W + G +L GH+ + + +++ L
Sbjct: 55 HEGEVYCCKF-HPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGP--QLACTGSDDGTVKLWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK +HT++ +T V ++ F ++SGG DN +K+WDL KL++ + H +
Sbjct: 172 RKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETF 217
+ L + S D +V+ WD+ F
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPF 257
Score = 248 (92.4 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 68/244 (27%), Positives = 115/244 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE--V 72
HS V L S +L + D V +W + L GHTS ++S F +
Sbjct: 98 HSGAVMELHYNTDGS-LLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC-FPARRGPQ 155
Query: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
L G+ GT+KLWD+ + V T + +SV F+ + SG +D ++K+WD+R+
Sbjct: 156 LACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQ 214
Query: 133 KGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDF 181
I++ +GH V + + DG +++S DN+V++WD+ A K +H+F
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNF 274
Query: 182 KCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRT 241
+ + ++C + +A GSADR V WD T ++ V + F+P+
Sbjct: 275 E--KNLLRC-SWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPI 331
Query: 242 LLCG 245
+L G
Sbjct: 332 VLSG 335
Score = 221 (82.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 72/276 (26%), Positives = 122/276 (44%)
Query: 24 IGRKSSRV-LVTGGEDHKVNLWAIGKPNA------ILSLSGHTSGIDSVSFDSSEVLVAA 76
+G K R LV + +++ A+G P + I+ LSGH + F + +A+
Sbjct: 16 VGVKRPRTELVAAAQSQQLS--AMGPPRSSSLQAPIMLLSGHEGEVYCCKFHPNGATLAS 73
Query: 77 GAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
I +W++ + + TL GH + + ++ G S S D + +WD
Sbjct: 74 SGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGER 133
Query: 136 IHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+ KGHT VN+ G + +G +D TVKLWD+ +H F+ + Q+ + F+
Sbjct: 134 VKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFN 192
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVF 253
+ +G D +K WDL +LI S V L+ + DG LL + S++V+
Sbjct: 193 DTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
Query: 254 SWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSYN 287
P + ++ NVH E LL CS++
Sbjct: 253 DIRPFAPKERC----VKIFQGNVHNFEKNLLRCSWS 284
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH--TYKGHTRGVNAIRF 151
+ L+GH FHP G AS D + +W++ C + T KGH+ V + +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGD-CENYATLKGHSGAVMELHY 107
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ-CIDFHPHEFLLATGSADRTVK 210
DG + S D TV +WD G+ + K H + C L TGS D TVK
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWS 269
WD+ + + T V +TFN ++ G + +KV+ + ++
Sbjct: 168 LWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGD 226
Query: 270 RLSDLNVH-EGKLLGCSYNQSCVGVWVVDISRIEP 303
++ L++ +G L + + V VW DI P
Sbjct: 227 SVTGLSLSADGSYLLSNSMDNSVRVW--DIRPFAP 259
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 56/109 (51%), Positives = 80/109 (73%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
+ TK A+KLQE VAH+S V+ L +G+ S R+L TGG+D +VNLW+I KPN I+SL+GHTS
Sbjct: 5 VVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISV 107
++SV ++ E L+ AG+ SG+I++WDLE AK TL GH+ C+ +
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAK---TL-GHQEERLCLPI 109
Score = 135 (52.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 86 WDLEEAKIVRTLTGHRSNCISVDF-HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
W L+E + H SN S+ G A+G D + +W I K CI + GHT
Sbjct: 11 WKLQE------IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64
Query: 145 GVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLL 178
V ++R +V+G + ++++WDL A K L
Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKTL 98
Score = 102 (41.0 bits), Expect = 0.00023, P = 0.00023
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 142 HTRGVNAIRF-TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL 200
H V+++ GR + +GG+D V LW + + H ++ + + E L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 201 ATGSADRTVKFWDLETFELIG 221
GS +++ WDLE + +G
Sbjct: 79 VAGSQSGSIRVWDLEAAKTLG 99
Score = 98 (39.6 bits), Expect = 0.00061, P = 0.00061
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 58 HTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
H S + S+ +S L+A G + LW + + + +LTGH S SV + E
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 117 ASGSLDTNLKIWDI 130
+GS ++++WD+
Sbjct: 79 VAGSQSGSIRVWDL 92
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 281 (104.0 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 73/271 (26%), Positives = 126/271 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW++ G + +L GH+ + + +++ +
Sbjct: 66 HEGEVYCCKFHPNGS-TLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 182
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK I T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 183 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 241
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 300
Query: 242 LLCGLHESLKVFSWEPIRCHDAVDVGWSRLS 272
+ G +S ++ W + + RLS
Sbjct: 301 IAAGSADSF-LYPWHSLSVRSLGQIPRHRLS 330
Score = 224 (83.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 53/217 (24%), Positives = 106/217 (48%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K AI + +T + +V+F
Sbjct: 144 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTF 202
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 203 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 262
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D+ + W + + L
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHSLSVRSLG 322
Query: 180 DFKCHEGQIQCIDFHPHEFL-LATGSADRTVKFWDLE 215
H Q P E + + + S+D+ + +++
Sbjct: 323 QIPRHRLSRQEDSVKPQEGIXILSASSDKRLYMGEIQ 359
Score = 201 (75.8 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 61/241 (25%), Positives = 104/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW + + TL GH + + ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN 119
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 120 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 179
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 180 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 238
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + ++ NVH E LL CS+
Sbjct: 239 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VKIFQGNVHNFEKNLLRCSW 294
Query: 287 N 287
+
Sbjct: 295 S 295
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 294 (108.6 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + +GH + F
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
LVA G SG +K+W ++ + V + + +++HP +G+ D N +W +
Sbjct: 147 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQI 188
C T++G R PDG+ V G ED T+++WDL G +H K H+G +
Sbjct: 205 TGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPL 263
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
C+ + L+ TGS D K T +++G PET
Sbjct: 264 TCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPET 302
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/207 (20%), Positives = 84/207 (40%)
Query: 47 GKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
G ++ ++ + H++ + VS D + L G +W L + +++ GH+ +
Sbjct: 79 GPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVT 138
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
F A+G + LK+W + K + +++ + + + P +++G D
Sbjct: 139 CAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGD--LEWMEWHPRAPVLLAGTADG 196
Query: 166 TVKLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFLLATGSADRTVKFWDLETFELI-- 220
+W + G D K +G C P G D T++ WDL+ I
Sbjct: 197 NTWMWKVPTG----DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNSIHV 252
Query: 221 --GSAGPETSGVRCLTFNPDGRTLLCG 245
G+ G + + C+ N DG +L G
Sbjct: 253 LKGTEGHQ-GPLTCVATNQDGSLILTG 278
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 294 (108.6 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + +GH + F
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
LVA G SG +K+W ++ + V + + +++HP +G+ D N +W +
Sbjct: 147 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQI 188
C T++G R PDG+ V G ED T+++WDL G +H K H+G +
Sbjct: 205 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 263
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
C+ + L+ TGS D K T +++G PET
Sbjct: 264 TCVAANQDGSLILTGSVDCQAKLVSATTGKVVGVFRPET 302
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 43/207 (20%), Positives = 84/207 (40%)
Query: 47 GKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
G ++ ++ + H++ + VS D + L G +W L + +++ GH+ +
Sbjct: 79 GPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVT 138
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
F A+G + LK+W + K + +++ + + + P +++G D
Sbjct: 139 CAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGD--LEWMEWHPRAPVLLAGTADG 196
Query: 166 TVKLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFLLATGSADRTVKFWDLETFELI-- 220
+W + G D K +G C P G D T++ WDL+ I
Sbjct: 197 NTWMWKVPNG----DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHV 252
Query: 221 --GSAGPETSGVRCLTFNPDGRTLLCG 245
G+ G + + C+ N DG +L G
Sbjct: 253 LKGTEGHQ-GPLTCVAANQDGSLILTG 278
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 294 (108.6 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 64/219 (29%), Positives = 105/219 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + +GH + F
Sbjct: 87 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 146
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
LVA G SG +K+W ++ + V + + +++HP +G+ D N +W +
Sbjct: 147 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 204
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQI 188
C T++G R PDG+ V G ED T+++WDL G +H K H+G +
Sbjct: 205 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 263
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
C+ + L+ TGS D K T +++G PET
Sbjct: 264 TCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPET 302
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 43/207 (20%), Positives = 84/207 (40%)
Query: 47 GKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
G ++ ++ + H++ + VS D + L G +W L + +++ GH+ +
Sbjct: 79 GPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVT 138
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
F A+G + LK+W + K + +++ + + + P +++G D
Sbjct: 139 CAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGD--LEWMEWHPRAPVLLAGTADG 196
Query: 166 TVKLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFLLATGSADRTVKFWDLETFELI-- 220
+W + G D K +G C P G D T++ WDL+ I
Sbjct: 197 NTWMWKVPNG----DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHV 252
Query: 221 --GSAGPETSGVRCLTFNPDGRTLLCG 245
G+ G + + C+ N DG +L G
Sbjct: 253 LKGTEGHQ-GPLTCVATNQDGSLILTG 278
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 296 (109.3 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 74/238 (31%), Positives = 115/238 (48%)
Query: 34 TGGEDHKVNLWAIGKPNAILSLSGHT---SGID------SVSFDSSEVLVAAGAASGTIK 84
+G +V +W + + GHT SG+D + DS ++ +A GAA T+
Sbjct: 189 SGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
Query: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
LW ++ + L GH + V FHP G++ S S DT ++WD+ + +GH+
Sbjct: 249 LWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSE 308
Query: 145 GVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGS 204
G+ +I PDG V SGG D ++WDL +GK + H QI + + P+ + LAT S
Sbjct: 309 GIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSS 368
Query: 205 ADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDG--RTLLCGLHESLKVFSWEPIRC 260
AD TVK WDL L + +S V + + G R + ++ V W P+ C
Sbjct: 369 ADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGC-VKLWNPLNC 425
Score = 246 (91.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 55/187 (29%), Positives = 89/187 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S LV+ D LW + +L GH+ GI S++ LV++G ++WD
Sbjct: 276 SGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWD 335
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
L K + L H +++ + P G A+ S D +KIWD+RK HT H+ V+
Sbjct: 336 LRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVS 395
Query: 148 AIRFTPDG--RWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
+R+ G R++ + G D VKLW+ L+ HE ++ +D + F+ +
Sbjct: 396 DVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDRFI--SSGY 453
Query: 206 DRTVKFW 212
DRT+K W
Sbjct: 454 DRTIKLW 460
Score = 239 (89.2 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 67/230 (29%), Positives = 103/230 (44%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEE 90
L TG D+ V LW + +L L GH + + V+F S + LV+A + T +LWD+
Sbjct: 238 LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT-TWRLWDVHT 296
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ GH S+ P G +SG D +IWD+R I H R + A+
Sbjct: 297 GVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMA 356
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFLLATGSADR 207
++P+G + + D+TVK+WDL L H H ++ I+ + F+ AT D
Sbjct: 357 WSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFI-ATSGYDG 415
Query: 208 TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 257
VK W+ LI S V + D R + G ++K+ W P
Sbjct: 416 CVKLWNPLNCSLIKSMVGHEEKVMSVDGYGD-RFISSGYDRTIKL--WYP 462
Score = 187 (70.9 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 59/268 (22%), Positives = 114/268 (42%)
Query: 40 KVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
K ++ + K + S G I V F ++ A+G+ G +K+W+ + V+ G
Sbjct: 153 KSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRG 212
Query: 100 HRSNCISVDFHPFGEFF---------ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
H +D++P + + A+G+ D + +W + + +GH V +
Sbjct: 213 HTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVA 272
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F P G ++VS D T +LWD+ G L + H I I P L+++G D +
Sbjct: 273 FHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGR 332
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWS 269
WDL + + I + + ++P+G L +++K++ + + S
Sbjct: 333 IWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSS 392
Query: 270 RLSDLN-VHEG--KLLGCSYNQSCVGVW 294
+SD+ + G + + S CV +W
Sbjct: 393 LVSDVRYIESGVNRFIATSGYDGCVKLW 420
Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 51/191 (26%), Positives = 88/191 (46%)
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
SE+ V SG + L++A+++ + G V F G FASGS +K+W+
Sbjct: 141 SEIPVPEIVLSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWN 200
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGR-W--------VVSGGEDNTVKLWDLTAGKLLHD 180
+ ++GHT V+ + + P + W + +G DNTV LW + L
Sbjct: 201 SDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLR 260
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET-FELIGSAGPETSGVRCLTFNPDG 239
+ H ++ + FHP L + S D T + WD+ T EL+ G + G+ + PDG
Sbjct: 261 LEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEG-HSEGIFSIACQPDG 319
Query: 240 RTLLCGLHESL 250
+ G ++++
Sbjct: 320 SLVSSGGNDAI 330
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 262 (97.3 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 72/254 (28%), Positives = 116/254 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLSGHTSGIDSVSFD 68
AH+ V + +S V+VT D + LW + K + A ++GH+ + V
Sbjct: 13 AHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S +G+ G ++LWDL + R GH + +SV F S S D +K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 129 DIRKKGCIHTYK---GHTRGVNAIRFTPDGR--WVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+ + C +T GH V+ +RF+P+ +VS D TVK+W+L KL +
Sbjct: 133 NTLGE-CKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG 191
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H G + + P L A+G D + WDL + + S S + L F+P+ R L
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL-EAGSIIHSLCFSPN-RYWL 249
Query: 244 CGLHE-SLKVFSWE 256
C E S++++ E
Sbjct: 250 CAATENSIRIWDLE 263
Score = 240 (89.5 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 55/215 (25%), Positives = 102/215 (47%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ HS V + + + ++G D ++ LW + + GHT + SV+F +
Sbjct: 57 RRMTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 70 SEVLVAAGAASGTIKLWD-LEEAKI-VRTLTGHRS--NCISVDFHPFGEFFASGSLDTNL 125
+ + + TIKLW+ L E K + GH+ +C+ + S S D +
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W+++ +T GH+ +N + +PDG SGG+D + LWDL GK L+ +
Sbjct: 176 KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
I + F P+ + L + + +++ WDLE+ ++
Sbjct: 236 -IIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVV 268
Score = 234 (87.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 64/255 (25%), Positives = 121/255 (47%)
Query: 54 SLSGHTSGIDSVS--FDSSEVLVAAGAASGTIKLWDL-EEAKIV----RTLTGHRSNCIS 106
++ HT + +++ D+S+V+V + I LW L +E K R +TGH
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSII-LWKLTKEDKSYGVAQRRMTGHSHFVQD 68
Query: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNT 166
V G+F SGS D L++WD+ + GHT+ V ++ F+ D R +VS D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 167 VKLWDLTAGKL---LHDFKCHEGQIQCIDFHPHEFL--LATGSADRTVKFWDLETFELIG 221
+KLW+ T G+ + + H+ + C+ F P+ + + + S D+TVK W+L+ +L
Sbjct: 129 IKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN 187
Query: 222 SAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHD--AVDVGWSRLSDLNVHEG 279
+ + + + +PDG G + + + W+ +++ G S + L
Sbjct: 188 TLAGHSGYLNTVAVSPDGSLCASGGKDGV-ILLWDLAEGKKLYSLEAG-SIIHSLCFSPN 245
Query: 280 KLLGCSYNQSCVGVW 294
+ C+ ++ + +W
Sbjct: 246 RYWLCAATENSIRIW 260
Score = 193 (73.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 45/177 (25%), Positives = 90/177 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILS-LSGHTSGIDSVSF 67
+ FV H+ V + +R +V+ D + LW +G+ +S GH + V F
Sbjct: 99 RRFVGHTKDVLSVAFST-DNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRF 157
Query: 68 DSSEVLVAAGAASG--TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ ++ +AS T+K+W+L+ K+ TL GH +V P G ASG D +
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVI 217
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+WD+ + +++ + + ++++ F+P+ W+ + E N++++WDL + ++ D K
Sbjct: 218 LLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAATE-NSIRIWDLESKSVVEDLK 272
Score = 138 (53.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 34/135 (25%), Positives = 63/135 (46%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSS-RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
Y + E H V+C++ + +V+ D V +W + +L+GH+ +++V
Sbjct: 140 YTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTV 199
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L A+G G I LWDL E K + +L S S+ F P ++ + + ++
Sbjct: 200 AVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCFSP-NRYWLCAATENSI 257
Query: 126 KIWDIRKKGCIHTYK 140
+IWD+ K + K
Sbjct: 258 RIWDLESKSVVEDLK 272
Score = 44 (20.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDL 172
++ ++ DG + SG D +++W +
Sbjct: 299 SLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 41 (19.5 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 11/46 (23%), Positives = 18/46 (39%)
Query: 559 ESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSS 604
ES + ED + D DG K ++ +NW G++
Sbjct: 263 ESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLNWSADGNT 308
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 254 (94.5 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 71/255 (27%), Positives = 116/255 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLSGHTSGIDSVSFD 68
AH+ V + ++ ++V+ D + LW + K + A L+GH+ ++ V
Sbjct: 13 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS 72
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S +G+ G ++LWDL R GH + +SV F S S D +K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLW 132
Query: 129 DIRKKGCIHTY----KGHTRGVNAIRFTPDGRW--VVSGGEDNTVKLWDLTAGKLLHDFK 182
+ + C +T +GH V+ +RF+P+ +VS D TVK+W+L+ KL
Sbjct: 133 NTLGE-CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 191
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
H G + + P L A+G D V WDL + + S S + L F+P+ R
Sbjct: 192 GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL-EANSVIHALCFSPN-RYW 249
Query: 243 LCGLHE-SLKVFSWE 256
LC E +K++ E
Sbjct: 250 LCAATEHGIKIWDLE 264
Score = 239 (89.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 5 RAYKLQE--FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
+AY + + HS V + + + ++G D ++ LW + + GHT +
Sbjct: 50 KAYGVAQRRLTGHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV 108
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWD-LEEAK--IVRTLTGHRS--NCISVDFHPFGEFFA 117
SV+F + + + TIKLW+ L E K I GHR +C+ +
Sbjct: 109 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 168
Query: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL 177
S S D +K+W++ T GHT V+ + +PDG SGG+D V LWDL GK
Sbjct: 169 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 228
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
L+ + + I + F P+ + L + + +K WDLE+ ++
Sbjct: 229 LYSLEANS-VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIV 269
Score = 233 (87.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 62/216 (28%), Positives = 105/216 (48%)
Query: 54 SLSGHTSGIDSVS--FDSSEVLVAAGAASGTIKLWDL---EEAKIV--RTLTGHRSNCIS 106
++ HT + +++ D+++++V+A I LW L ++A V R LTGH
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSII-LWKLTKDDKAYGVAQRRLTGHSHFVED 68
Query: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNT 166
V G+F SGS D L++WD+ + GHT+ V ++ F+ D R +VS D T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT 128
Query: 167 VKLWDLTAGKLLHDF----KCHEGQIQCIDFHPHEF--LLATGSADRTVKFWDLETFELI 220
+KLW+ T G+ + + H + C+ F P+ + + S D+TVK W+L +L
Sbjct: 129 IKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 187
Query: 221 GSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+ T V + +PDG G + + V W+
Sbjct: 188 STLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWD 222
Score = 184 (69.8 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 46/178 (25%), Positives = 87/178 (48%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILSLSG--HTSGIDSVS 66
+ FV H+ V + +R +V+ D + LW +G+ +S G H + V
Sbjct: 99 RRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 157
Query: 67 FDSSEVLVAAGAASG--TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
F + + +AS T+K+W+L K+ TL GH +V P G ASG D
Sbjct: 158 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV 217
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+ +WD+ + +++ + ++ ++A+ F+P+ W+ + E +K+WDL + ++ D K
Sbjct: 218 VLLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCAATEHG-IKIWDLESKSIVEDLK 273
Score = 47 (21.6 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 559 ESPASYEDERYDSLGHKSNRDGYAMESQKRGRMHSLVINWEKRGSS 604
ES + ED + D D + KR ++ +NW GS+
Sbjct: 264 ESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGST 309
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 290 (107.1 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 63/219 (28%), Positives = 105/219 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + +GH + F
Sbjct: 88 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 147
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
LVA G SG +K+W ++ + V + + +++HP +G+ D N +W +
Sbjct: 148 TLVATGDMSGLLKVWQVDTKEEVWSFEA--GDLEWMEWHPRAPVLLAGTADGNTWMWKVP 205
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC---HEGQI 188
C T++G R PDG+ V G ED T+++WDL G +H K H+G +
Sbjct: 206 NGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPL 264
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
C+ + L+ TGS D + T +++G PET
Sbjct: 265 TCVATNQDGSLILTGSVDCQAQLVSATTGKVVGVFRPET 303
Score = 128 (50.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 43/207 (20%), Positives = 84/207 (40%)
Query: 47 GKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
G ++ ++ + H++ + VS D + L G +W L + +++ GH+ +
Sbjct: 80 GPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVT 139
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
F A+G + LK+W + K + +++ + + + P +++G D
Sbjct: 140 CAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGD--LEWMEWHPRAPVLLAGTADG 197
Query: 166 TVKLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFLLATGSADRTVKFWDLETFELI-- 220
+W + G D K +G C P G D T++ WDL+ I
Sbjct: 198 NTWMWKVPNG----DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGSPIHV 253
Query: 221 --GSAGPETSGVRCLTFNPDGRTLLCG 245
G+ G + + C+ N DG +L G
Sbjct: 254 LKGTEGHQ-GPLTCVATNQDGSLILTG 279
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 287 (106.1 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 64/218 (29%), Positives = 103/218 (47%)
Query: 23 KIGRKSSRVLVTG--GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAAS 80
K+ + + G G+ W I +P +LSGH S + V F L+ + +
Sbjct: 71 KLNEAKEEITLGGPVGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASED 129
Query: 81 GTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK 140
TIK+WD E RTL GH + + F G+ AS S D +K+WD + CI T
Sbjct: 130 ATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMH 189
Query: 141 GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL 200
GH V+++ P+G +VS D T+K+W++ G + F H ++ + + LL
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLL 249
Query: 201 ATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPD 238
A+ S D+TV+ W + T E V C+++ P+
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 210 (79.0 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 49/159 (30%), Positives = 75/159 (47%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W++ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLL--CGLHESLKVF 253
+ + VR + N DG TLL C ++++V+
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLLASCSNDQTVRVW 261
Score = 209 (78.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 39/101 (38%), Positives = 55/101 (54%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WDI C+ T GH V + F P GR+VVS +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ + HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 186 (70.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 62/222 (27%), Positives = 91/222 (40%)
Query: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH 196
+ GH V + F P +VS ED T+K+WD AG K H +Q I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQT 161
Query: 197 EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSW 255
LLA+ SAD T+K WD + FE I + V + P+G ++ + ++K++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Query: 256 EPIRCHDAVDVG---WSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRV 312
C G W R+ N +G LL N V VWVV + V
Sbjct: 222 ATGYCVKTF-TGHREWVRMVRPN-QDGTLLASCSNDQTVRVWVVATKECKAELREHEHVV 279
Query: 313 NGLSESKSSASGNLSVL--NENSAKASLGKLSVSQNSDPLVK 352
+S + SA +S +EN G +S + D +K
Sbjct: 280 ECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIK 321
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 47/158 (29%), Positives = 74/158 (46%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
++ TV + K + + E H V + +A ++S T + S L
Sbjct: 253 SNDQTVRVWVVATKECKAELREHE-HVVECISWAPESAHPTISEATGSENKKSGKPGPFL 311
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
++ G+ TIK+WD+ + TL GH + V FHP G F S + D L+IWD + K
Sbjct: 312 LS-GSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
C+ T H V ++ F +VV+G D TVK+W+
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W I +++L GH + + V F V + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + ++TL+ H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDL 214
G +++SG D T+K+WD++ G L H+ ++ + FHP + + + D+T++ WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 215 ETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+ + + V L F+ ++ G + +++KV WE
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKV--WE 408
Score = 50 (22.7 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 13/76 (17%), Positives = 29/76 (38%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y ++ F H V ++ + + +L + D V +W + L H ++ +S
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGT-LLASCSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 67 FDSSEVLVAAGAASGT 82
+ A+G+
Sbjct: 284 WAPESAHPTISEATGS 299
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 299 (110.3 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 69/256 (26%), Positives = 124/256 (48%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
AH S + LK + + L++ + V W NA + + I ++F ++V
Sbjct: 173 AHDSAIRALKWA-SNEQWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAPTDVK 231
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN--LKIWDIR 131
A + GT ++WD R L GH + +D+HP A+GS DT +KIWD +
Sbjct: 232 FATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPK 291
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
C+ T + H V A+ F +G W+++GG D+ VK++D+ K + ++ H+ ++ +
Sbjct: 292 SGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISL 351
Query: 192 DFHP-HEFLLATGSADRTVKFWDLETFELIGSAG-PETSGVRCLTFNPDGRTLLCGLHES 249
+HP HE L +G D ++ +W ++ + IG + + ++P G L G +++
Sbjct: 352 AWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDN 411
Query: 250 LKVFSWEPIRCHDAVD 265
F W R D V+
Sbjct: 412 NTKF-WARNRPGDTVE 426
Score = 181 (68.8 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 57/241 (23%), Positives = 99/241 (41%)
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
SV + + G +G LW+ L H S ++ + ++ S
Sbjct: 138 SVCWSPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGG 197
Query: 124 NLKIWDIRKKGCIHTYKGHT-RGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+K W H + H + + F P + +D T ++WD +
Sbjct: 198 YVKYWQPNMNNA-HMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLR 256
Query: 183 CHEGQIQCIDFHPHEFLLATGSAD--RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
H +++CID+HP + L+ATGS D + VK WD ++ + + S V + FN +G
Sbjct: 257 GHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGN 316
Query: 241 TLLCGLHESL-KVFS---WEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVV 296
LL G + L K++ + +R + A L+ +HEG + + S V W+V
Sbjct: 317 WLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIV-YWMV 375
Query: 297 D 297
D
Sbjct: 376 D 376
Score = 180 (68.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 50/209 (23%), Positives = 87/209 (41%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L+TG + + LW N L H S I ++ + S+E + + G +K W
Sbjct: 148 LITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGGYVKYWQ-PNM 206
Query: 92 KIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+ H+ I + F P FA+ S D ++WD + +GH V I
Sbjct: 207 NNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCID 266
Query: 151 FTPDGRWVVSGGEDNT--VKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ P + +G D VK+WD +G L + H+ + ++F+ + L TG D
Sbjct: 267 WHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHL 326
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNP 237
VK +D+ + + + V L ++P
Sbjct: 327 VKMYDIRMMKEMRTYRAHKKEVISLAWHP 355
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 293 (108.2 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 66/259 (25%), Positives = 118/259 (45%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL + H+ V + + ++ +GG D + +W + LSL+GH S + +V
Sbjct: 174 WKLYRVASGHTGWVRAVDV-EPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAV 232
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ +G +K WDLE K++R GH S ++ HP + + + D+
Sbjct: 233 KVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTA 292
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WD+R K +H + GHT V + V++ D TV+LWDL AG+ + H+
Sbjct: 293 RVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHK 352
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
++ + HP + A+ S D +K W L E + + + + L+ N DG +
Sbjct: 353 KSVRALTIHPRLNMFASASPDN-IKQWKLPKGEFMQNLSGHNAIINTLSSNDDGVVVSGA 411
Query: 246 LHESLKVFSWEPIRCHDAV 264
+ SL + W C +
Sbjct: 412 DNGSLCFWDWRSGFCFQKI 430
Score = 210 (79.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 60/214 (28%), Positives = 94/214 (43%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + S VLVT D +W + + +GHT+ + V
Sbjct: 261 IRHYHGHLSAVQALSV-HPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQ 319
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S + V + T++LWDL + + TLT H+ + ++ HP FAS S D N+K W
Sbjct: 320 SVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPD-NIKQW 378
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF--KCHEG 186
+ K + GH +N + DG VVSG ++ ++ WD +G K G
Sbjct: 379 KLPKGEFMQNLSGHNAIINTLSSNDDGV-VVSGADNGSLCFWDWRSGFCFQKIQTKPQPG 437
Query: 187 QIQ--------CIDFHPHEFLLATGSADRTVKFW 212
I+ C D L T AD+T+K +
Sbjct: 438 SIESEAGIYASCFD--KTGLRLITAEADKTIKMY 469
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 274 (101.5 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 91/320 (28%), Positives = 144/320 (45%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLSGHTSGIDSVSFD 68
AH+ V + +S ++VT D + LW + K + A L+GH+ ++ V
Sbjct: 13 AHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S +G+ G ++LWDL + R GH + +SV F S S D +K+W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 129 DIRKKGCIHTYK---GHTRGVNAIRFTPDGR--WVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+ + C +T GH V+ +RF+P+ +VS D TVK+W+L KL +
Sbjct: 133 NTLGE-CKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVG 191
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H G + + P L A+G D + WDL + + S S + L F+P+ R L
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL-EAGSIIHSLCFSPN-RYWL 249
Query: 244 CGLHE-SLKVFSWEPIRCHDAV-DVGWSRLSDLNVHEGKLLGCSYNQS----CVGV-WVV 296
C E S+++ W+ + V D+ S+ +EG + G NQ C + W
Sbjct: 250 CAATENSIRI--WD-LESKSVVEDLKVDLKSEAEKNEGGV-GTG-NQKKVIYCTSLNWSA 304
Query: 297 DISRI-EPYTIGSVTRVNGL 315
D S + YT G V RV G+
Sbjct: 305 DGSTLFSGYTDG-VVRVWGI 323
Score = 234 (87.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 67/224 (29%), Positives = 108/224 (48%)
Query: 55 LSGHTSGIDSVS--FDSSEVLVAAGAASGTIKLWDL-EEAKIV----RTLTGHRSNCISV 107
+ HT + +++ D+S+++V A I LW L ++ K R LTGH V
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSII-LWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTV 167
G+F SGS D L++WD+ + GHT+ V ++ F+ D R +VS D T+
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 168 KLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFL--LATGSADRTVKFWDLETFEL--- 219
KLW+ T G+ + +G + C+ F P+ + + + S D+TVK W+L+ +L
Sbjct: 130 KLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNS 188
Query: 220 -IGSAG------PETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+G +G G C + DG LL L E K++S E
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 231 (86.4 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 54/215 (25%), Positives = 101/215 (46%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+ HS V + + + ++G D ++ LW + GHT + SV+F +
Sbjct: 57 RRLTGHSHFVEDVVLS-SDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 70 SEVLVAAGAASGTIKLWD-LEEAKI-VRTLTGHRS--NCISVDFHPFGEFFASGSLDTNL 125
+ + + TIKLW+ L E K + GH+ +C+ + S S D +
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTV 175
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W+++ ++ GH+ +N + +PDG SGG+D + LWDL GK L+ +
Sbjct: 176 KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS 235
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
I + F P+ + L + + +++ WDLE+ ++
Sbjct: 236 -IIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVV 268
Score = 187 (70.9 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 44/177 (24%), Positives = 90/177 (50%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILSLS-GHTSGIDSVSF 67
+ FV H+ V + +R +V+ D + LW +G+ +S GH + V F
Sbjct: 99 RRFVGHTKDVLSVAFST-DNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRF 157
Query: 68 DSSEVLVAAGAASG--TIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ ++ +AS T+K+W+L+ K+ +L GH +V P G ASG D +
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVI 217
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+WD+ + +++ + + ++++ F+P+ W+ + E N++++WDL + ++ D K
Sbjct: 218 LLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAATE-NSIRIWDLESKSVVEDLK 272
Score = 137 (53.3 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSS-RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
Y + E H V+C++ + +V+ D V +W + SL GH+ +++V
Sbjct: 140 YTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTV 199
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L A+G G I LWDL E K + +L S S+ F P ++ + + ++
Sbjct: 200 AVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCFSP-NRYWLCAATENSI 257
Query: 126 KIWDIRKKGCIHTYK 140
+IWD+ K + K
Sbjct: 258 RIWDLESKSVVEDLK 272
Score = 43 (20.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 559 ESPASYEDERYDSLGH-KSNRDGYAMESQKRGRMHSLVINWEKRGSS 604
ES + ED + D + N G +QK+ ++ +NW GS+
Sbjct: 263 ESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKV-IYCTSLNWSADGST 308
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 274 (101.5 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 78/304 (25%), Positives = 138/304 (45%)
Query: 34 TGGEDHKVNLWAIGKPNAIL-SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAK 92
TG N+ I KP L +L GHT+ I V F + L+A+ + T+ LW
Sbjct: 18 TGNAGTSGNV-PIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK-GCIHTYKGHTRGVNAIRF 151
++ GH S + + + S S D L+IWD R C+ +GHT V + F
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF 136
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
P +VSG D T+++W++ GK + K H I + F+ L+ + S D + K
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 212 WDLETFELIGSAGPETS-GVRCLTFNPDGRTLLCG-LHESLKVFSWEP---IRCHDA-VD 265
WD + + + + S V F+P+G+ +L L +LK+ ++ ++ + +
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTN 256
Query: 266 VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD----ISRIEPYTIGSVTRVNGLSESKSS 321
+ S +V GK + +CV +W + + R+E +T ++ +++ S
Sbjct: 257 KVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEIS 316
Query: 322 ASGN 325
+SGN
Sbjct: 317 SSGN 320
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 63/260 (24%), Positives = 125/260 (48%)
Query: 5 RAYK-LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
+ Y+ L+ H++ ++C+K + +L + D + LW+ + I GH+SGI
Sbjct: 31 KPYRHLKTLEGHTAAISCVKFSNDGN-LLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEA-KIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
+++ S + + T+++WD + ++ L GH + V+F+P SGS D
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLH 179
++IW+++ C+ K H+ ++++ F DG +VS D + K+WD G K L
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT--FN- 236
D K + F P+ + + D T+K + T + + T+ V C+T F+
Sbjct: 210 DDK--SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSV 267
Query: 237 PDGRTLLCGLHESLKVFSWE 256
+G+ ++ G ++ V+ W+
Sbjct: 268 TNGKYIVSGSEDNC-VYLWD 286
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 59/204 (28%), Positives = 103/204 (50%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H++ V C+ S+ ++V+G D + +W + + + H+ I SV F+ L+
Sbjct: 127 HTNFVFCVNFNPPSN-LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLI 185
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKK 133
+ + G+ K+WD +E ++TL +S +S F P G+F +LD+ LK+ +
Sbjct: 186 VSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG 245
Query: 134 GCIHTYKGHTRGVNAIR--FT-PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ Y GHT V I F+ +G+++VSG EDN V LWDL A +L + H +
Sbjct: 246 KFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVIS 305
Query: 191 IDFHP--HEFLLATGSADRTVKFW 212
+ HP +E + D+T++ W
Sbjct: 306 VSCHPVQNEISSSGNHLDKTIRIW 329
Score = 250 (93.1 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 62/234 (26%), Positives = 112/234 (47%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS-LSGHTSGIDSVSF 67
+ + HSS ++ L S + +D + +W P L L GHT+ + V+F
Sbjct: 78 IHRYEGHSSGISDLAWS-SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNF 136
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ L+ +G+ TI++W+++ K VR + H SV F+ G S S D + KI
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 128 WDIRKKGCIHTY-KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
WD ++ C+ T + V+ +F+P+G++++ D+T+KL + GK L + H
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTN 256
Query: 187 QIQCID--FH-PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP 237
++ CI F + + +GS D V WDL+ ++ T V ++ +P
Sbjct: 257 KVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHP 310
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 274 (101.5 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 73/255 (28%), Positives = 116/255 (45%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-------AIGKPNAILSLSGHTSGIDSVSF 67
H+ V L ++ +L++G D + +W A G P SL GH+ +
Sbjct: 14 HNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKR--SLEGHSHIVSDCVI 71
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
S + + +++LW+L + RT GH ++ +SV F SGS D +K+
Sbjct: 72 SSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKL 131
Query: 128 WDIRKKGCIHTY--KGHTRGVNAIRFTPDGR--WVVSGGEDNTVKLWDLTAGKLLHDFKC 183
W+ C +T KGHT V+ +RF+P+ + +VS G D VK+W+L + +L D
Sbjct: 132 WNTLGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIG 190
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS--AGPETSGVRCLTFNPDGRT 241
H G I + P L A+G D WDL + + S AG E + L F+P+
Sbjct: 191 HTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE---IHALVFSPNRYW 247
Query: 242 LLCGLHESLKVFSWE 256
L S+ +F E
Sbjct: 248 LCAATSSSITIFDLE 262
Score = 261 (96.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 71/262 (27%), Positives = 117/262 (44%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y + HS V+ I + L + D + LW + + GHT+ + SVS
Sbjct: 54 YPKRSLEGHSHIVSDCVISSDGAYAL-SASWDKSLRLWELSSGQTTRTFVGHTNDVLSVS 112
Query: 67 FDSSEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDT 123
F + + +G+ TIKLW+ L + K T GH +C+ +P S D
Sbjct: 113 FSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDK 172
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
+K+W++ + GHT +N + +PDG SGG+D LWDL K H +
Sbjct: 173 LVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESK--HLYSL 230
Query: 184 HEG-QIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE--TSGVR-----C--L 233
H G +I + F P+ + L ++ ++ +DLE + PE G + C L
Sbjct: 231 HAGDEIHALVFSPNRYWLCAATSS-SITIFDLEKKSKVDELKPEYIEKGKKSREPECVSL 289
Query: 234 TFNPDGRTLLCGLHESLKVFSW 255
++ DG+TL G ++ K+ +W
Sbjct: 290 AWSADGQTLFAGYTDN-KIRAW 310
Score = 221 (82.9 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 69/226 (30%), Positives = 112/226 (49%)
Query: 54 SLSGHTSGIDSV--SFDSSEVLVAAGAASGTIKLWDL---EEAKIV--RTLTGHR---SN 103
+L GH + S+ S ++ +L++ G+ T+ +W+L E+A R+L GH S+
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLS-GSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSD 68
Query: 104 C-ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
C IS D G + S S D +L++W++ T+ GHT V ++ F+ D R +VSG
Sbjct: 69 CVISSD----GAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGS 124
Query: 163 EDNTVKLWDLTAGKLLHDF--KCHEGQIQCIDF--HPHEFLLATGSADRTVKFWDLETFE 218
D T+KLW+ T G + K H + C+ F +P ++ + D+ VK W+L +
Sbjct: 125 RDRTIKLWN-TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCR 183
Query: 219 L----IGSAGP------ETSGVRCLTFNPDGRTLLCGLHESLKVFS 254
L IG G G C + DG T+L L+ES ++S
Sbjct: 184 LQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYS 229
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 295 (108.9 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 55/184 (29%), Positives = 95/184 (51%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED + W +G N +L GH + V + A+G+ T +LW +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVL-YQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDR 415
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH ++ V FHP + A+GS D +++W ++ + + GH V ++
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L + + H I + F P L+A+ S D +V+
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNSVR 535
Query: 211 FWDL 214
WD+
Sbjct: 536 VWDI 539
Score = 269 (99.8 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 66/230 (28%), Positives = 103/230 (44%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDL GH VD P+
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMS--IRYWDLGSFTNTVLYQGHAYPVWDVDISPY 395
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
+FASGS D ++W + + Y GH V+ ++F P+ ++ +G D TV+LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC 232
G + F H G + + F P+ LA+ D+ +K WDL + L T +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITS 515
Query: 233 LTFNPDGRTLL-CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKL 281
LTF+PD + + S++V+ C D S L + V+ G++
Sbjct: 516 LTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSEL--VGVYTGQM 563
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +G D LW+ + + +GH + +D V F + +A G+ T++LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ VR TGHR +S+ F P G++ AS D LK+WD+ +GHT + +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITS 515
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDL 172
+ F+PD + S DN+V++WD+
Sbjct: 516 LTFSPDSSLIASASMDNSVRVWDI 539
Score = 220 (82.5 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H + V+C+K +S L TG D V LW+ + N++ +GH + S
Sbjct: 415 RTYPLRIYAGHLADVDCVKF-HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
++F + +A+ +KLWDL + + L GH N S+ F P AS S+D +
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDNS 533
Query: 125 LKIWDIRKKGC 135
+++WDIR C
Sbjct: 534 VRVWDIRNTHC 544
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
+++ L+AAG + IKLW L K+ HR + + H +
Sbjct: 271 LNTAEISPESKLLAAGFDNSCIKLWSLRSKKLKPE--PHRVDVSRI--HLACDILEEEDD 326
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
+ + D+ + + +GH V + RF D ++S ED +++ WDL + +
Sbjct: 327 EDD----DVGTE--MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLY 380
Query: 182 KCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE-TFELIGSAGPETSGVRCLTFNPDGR 240
+ H + +D P+ A+GS DRT + W + T+ L AG + V C+ F+P+
Sbjct: 381 QGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAG-HLADVDCVKFHPNSN 439
Query: 241 TLLCG 245
L G
Sbjct: 440 YLATG 444
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 31/124 (25%), Positives = 52/124 (41%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H V L + + L + GED ++ LW + L GHT I S++F
Sbjct: 464 FTGHRGPVLSLAFS-PNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDS 522
Query: 72 VLVAAGAASGTIKLWDLEE-----------AKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
L+A+ + ++++WD+ +++V TG SN +SV F +G
Sbjct: 523 SLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGI 582
Query: 121 LDTN 124
N
Sbjct: 583 TQEN 586
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 286 (105.7 bits), Expect = 9.8e-23, P = 9.8e-23
Identities = 62/218 (28%), Positives = 103/218 (47%)
Query: 23 KIGRKSSRVLVTG--GEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAAS 80
K+ + + G G+ W I +P +LSGH S + V F ++ + +
Sbjct: 71 KLNEAKEEINIGGPIGQKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASED 129
Query: 81 GTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK 140
TIK+WD E RTL GH + + F G+ AS S D +K+WD + CI T
Sbjct: 130 ATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH 189
Query: 141 GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLL 200
GH V+++ P+G +VS D T+K+W++ G + F H ++ + + L+
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLI 249
Query: 201 ATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPD 238
A+ S D+TV+ W + T E V C+++ P+
Sbjct: 250 ASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 48/159 (30%), Positives = 70/159 (44%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L+GHRS V FHP S S D +K+WD T KGHT V I F G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
+ S D T+KLWD + + H+ + + P+ + + S D+T+K W++ T
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVAT 223
Query: 217 FELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSW 255
+ + VR + N DG TL+ V W
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDG-TLIASSSNDQTVRVW 261
Score = 192 (72.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 35/101 (34%), Positives = 53/101 (52%)
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G F SGS D +K+WD+ C+ T GH V + P G+++VS +D T+++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
+ HE + +DFH + TGS D+TVK W+
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 50/164 (30%), Positives = 70/164 (42%)
Query: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH 196
+ GH V + F P +VS ED T+K+WD G K H +Q I F
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 197 EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
LLA+ SAD T+K WD + FE I + V + P+G ++ + + WE
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMWE 220
Query: 257 PIRCHDAVD-VG---WSRLSDLNVHEGKLLGCSYNQSCVGVWVV 296
+ G W R+ N +G L+ S N V VWVV
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPN-QDGTLIASSSNDQTVRVWVV 263
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 34/96 (35%), Positives = 51/96 (53%)
Query: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
+G+ TIK+WD+ + TL GH + V HP G++ S + D L+IWD + K C
Sbjct: 313 SGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRC 372
Query: 136 IHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
T H V ++ F +VV+G D TVK+W+
Sbjct: 373 TKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 150 (57.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLW 86
K L++G D + +W + +++L GH + + V + + A T+++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 87 DLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
D + + +TL+ H S+DFH + +GS+D +K+W+ R
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 291 (107.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 63/242 (26%), Positives = 109/242 (45%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H V C+ + ++ TG D + +W + L+L+GH + + ++ +
Sbjct: 162 HLGWVRCVDV-EPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYL 220
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+ +K WDLE K++R GH S ++ HP + + D ++WD+R +
Sbjct: 221 FSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQ 280
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+H GH V ++ VV+G D+T++LWDL AGK L H+ ++ + H
Sbjct: 281 NVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLH 340
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFS 254
P EF A+GS+D +K W +G+ + V L+ N D + G F
Sbjct: 341 PDEFTFASGSSDN-IKHWKFPEGAFMGNFEGHNAIVNTLSINSDN-VMFSGADNGSMCF- 397
Query: 255 WE 256
W+
Sbjct: 398 WD 399
Score = 246 (91.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
+SGH + V + GA TIK+WDL + TLTGH + + P
Sbjct: 159 ISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHP 218
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+ S D +K WD+ I Y GH GV A++ P +V+ G D ++WD+
Sbjct: 219 YLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRT 278
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
+ +H H+ + + + + TGS D T++ WDL + + + VR L+
Sbjct: 279 RQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALS 338
Query: 235 FNPDGRTLLCGLHESLK 251
+PD T G +++K
Sbjct: 339 LHPDEFTFASGSSDNIK 355
Score = 186 (70.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
++R ++GH VD P ++F +G+ D +KIWD+ T GH V + +
Sbjct: 155 LMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVS 214
Query: 153 PDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
P ++ S GED VK WDL K++ + H + + HP +L T D + W
Sbjct: 215 PRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVW 274
Query: 213 DLET 216
D+ T
Sbjct: 275 DMRT 278
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 294 (108.6 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 55/186 (29%), Positives = 96/186 (51%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED + W +G N +L GH + V + A+G+ T +LW +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVL-YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDR 415
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH ++ V FHP + A+GS D +++W ++ + + GH V ++
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLS 475
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L + + H I + F P L+A+ S D +V+
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVR 535
Query: 211 FWDLET 216
WD+ +
Sbjct: 536 VWDIRS 541
Score = 267 (99.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 66/230 (28%), Positives = 102/230 (44%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDL GH VD PF
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMS--IRYWDLGSFTNTVLYQGHAYPVWDVDISPF 395
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
+FASGS D ++W + + Y GH V+ ++F P+ ++ +G D TV+LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC 232
G + F H G + + F P+ LA+ D+ +K WDL + L T +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 515
Query: 233 LTFNPD-GRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKL 281
L F+PD G + S++V+ C+ D L + V+ G++
Sbjct: 516 LAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGEL--VGVYTGQM 563
Score = 256 (95.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +G D LW+ + + +GH + +D V F + +A G+ T++LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ VR TGHR +S+ F P G++ AS D LK+WD+ +GHT + +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 515
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDL 172
+ F+PD + S DN+V++WD+
Sbjct: 516 LAFSPDSGLIASASMDNSVRVWDI 539
Score = 214 (80.4 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H + V+C+K +S L TG D V LW+ + N++ +GH + S
Sbjct: 415 RTYPLRIYAGHLADVDCVKF-HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
+SF + +A+ +KLWDL + + L GH + S+ F P AS S+D +
Sbjct: 474 LSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNS 533
Query: 125 LKIWDIRKKGC 135
+++WDIR C
Sbjct: 534 VRVWDIRSTCC 544
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 68/250 (27%), Positives = 107/250 (42%)
Query: 12 FVAHSSTVNCLKIGRKSS--RVLVTGGEDHKVNLWAIGKPNAILSLSGH--TSGIDSVSF 67
F A +T L SS ++L G ++ + LW++ + + S H TS I ++
Sbjct: 261 FYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSL-RSKKLKSEPHHVDTSRI-RLAC 318
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
D+ E +GT E KI+R GH S F S S D +++
Sbjct: 319 DTLEEEENEEDNTGT-------EMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRY 368
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
WD+ Y+GH V + +P + SG D T +LW L + H
Sbjct: 369 WDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLAD 428
Query: 188 IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGL 246
+ C+ FHP+ LATGS D+TV+ W + + V L+F+P+G+ L G
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 247 HESLKVFSWE 256
+ LK+ W+
Sbjct: 489 DQRLKL--WD 496
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H V L + + L + GED ++ LW + L GHT I S++F
Sbjct: 464 FTGHRGPVLSLSFS-PNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDS 522
Query: 72 VLVAAGAASGTIKLWDLEEA-----------KIVRTLTGHRSNCISVDFHPFGEFFASGS 120
L+A+ + ++++WD+ ++V TG SN +SV F +G
Sbjct: 523 GLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGI 582
Query: 121 LDTN 124
N
Sbjct: 583 TQEN 586
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 285 (105.4 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 59/204 (28%), Positives = 107/204 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
+++ H+S VN R+ +++ TG +D V LW I K AI + +T + +V+F
Sbjct: 143 RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTF 201
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + + +G IK+WDL + K+ T+ GH + + G + S ++D +++
Sbjct: 202 NDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRV 261
Query: 128 WDIR----KKGCIHTYKG--HTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R K+ C+ ++G H N +R ++PDG + +G D V +WD T+ ++L+
Sbjct: 262 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILY 321
Query: 180 DFKCHEGQIQCIDFHPHEFLLATG 203
H G I + FHP E ++ TG
Sbjct: 322 KLPGHAGSINEVAFHPDEPIIETG 345
Score = 272 (100.8 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 70/255 (27%), Positives = 120/255 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H V C K S L + G D + LW + G + +L GH+ + + +++ +
Sbjct: 65 HEGEVYCCKFHPNGS-TLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+ +WD E + V+ L GH S +C P + +GS D +K+WDI
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP--QLVCTGSDDGTVKLWDI 181
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
RKK I T++ +T V A+ F ++SGG DN +K+WDL KL + + H +
Sbjct: 182 RKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 240
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--------LIGSAGP-ETSGVRCLTFNPDGRT 241
+ L + + D TV+ WD+ F G+ E + +RC +++PDG
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRC-SWSPDGSK 299
Query: 242 LLCGLHESLKVFSWE 256
+ G + V+ W+
Sbjct: 300 IAAGSADRF-VYVWD 313
Score = 258 (95.9 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 66/245 (26%), Positives = 115/245 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-SFDSSEVL 73
HS V L S +L + D V +W + L GHTS ++S L
Sbjct: 108 HSGAVMELHYNTDGS-MLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
V G+ GT+KLWD+ + ++T + ++V F+ + SG +D ++K+WD+R+
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT--AGKL---------LHDFK 182
+T +GH V + + +G +++S DNTV++WD+ A K +H+F+
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
+ ++C + P +A GSADR V WD + ++ + + F+PD +
Sbjct: 286 --KNLLRC-SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
Query: 243 LCGLH 247
G H
Sbjct: 343 ETGFH 347
Score = 202 (76.2 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH + F + +A+ I LW++ + TL GH + + ++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG-RWVVSGGEDNTVKL 169
G S S D + +WD + KGHT VN+ G + V +G +D TVKL
Sbjct: 119 TDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKL 178
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F+ + Q+ + F+ + +G D +K WDL +L +
Sbjct: 179 WDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS 237
Query: 230 VRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVH--EGKLLGCSY 286
V L+ + +G LL + +++V+ P + ++ NVH E LL CS+
Sbjct: 238 VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERC----VKIFQGNVHNFEKNLLRCSW 293
Query: 287 N 287
+
Sbjct: 294 S 294
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 75/266 (28%), Positives = 127/266 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKS---SRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MTT+ ++ AH + + G+ S +++G D V +W L +L
Sbjct: 1 MTTQYGILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + S+ F P +F
Sbjct: 61 EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQF 120
Query: 116 FASGSLDTNLKIWDIR--KKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWD 171
A+GS + I+ + KK Y TRG + +I ++PDG+++ SG D + ++D
Sbjct: 121 LATGSHVGKVNIFGVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
+ GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWE 256
+ F PD + + S+KV W+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKV--WD 260
Score = 218 (81.8 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD + C+HT+ H V +
Sbjct: 221 HANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ G +VS G+D + ++D
Sbjct: 281 KYNGSGSKIVSVGDDQEIHIYD 302
Score = 217 (81.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 49/202 (24%), Positives = 94/202 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H V + I S + + D + LW + I S+ S++F +
Sbjct: 63 HQLGVVSVDISHTGS-IAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFL 121
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A G+ G + ++ +E K +L +S+ + P G++ ASG++D + I+DI
Sbjct: 122 ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+HT +GH + ++ F+PD + +V+ +D +K++D+ L H + + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC 241
Query: 195 PHEFLLATGSADRTVKFWDLET 216
P + + S+D++VK WD T
Sbjct: 242 PDDTHFVSSSSDKSVKVWDAGT 263
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 272 (100.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 75/266 (28%), Positives = 127/266 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKS---SRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MTT+ ++ AH + + G+ S +++G D V +W L +L
Sbjct: 1 MTTQYGILFKQEQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + S+ F P +F
Sbjct: 61 EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQF 120
Query: 116 FASGSLDTNLKIWDIR--KKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWD 171
A+GS + I+ + KK Y TRG + +I ++PDG+++ SG D + ++D
Sbjct: 121 LATGSHVGKVNIFGVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
+ GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWE 256
+ F PD + + S+KV W+
Sbjct: 237 NVAFCPDDTHFVSSSSDKSVKV--WD 260
Score = 218 (81.8 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD + C+HT+ H V +
Sbjct: 221 HANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ G +VS G+D + ++D
Sbjct: 281 KYNGSGSKIVSVGDDQEIHIYD 302
Score = 217 (81.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 49/202 (24%), Positives = 94/202 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H V + I S + + D + LW + I S+ S++F +
Sbjct: 63 HQLGVVSVDISHTGS-IAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFL 121
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
A G+ G + ++ +E K +L +S+ + P G++ ASG++D + I+DI
Sbjct: 122 ATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+HT +GH + ++ F+PD + +V+ +D +K++D+ L H + + F
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC 241
Query: 195 PHEFLLATGSADRTVKFWDLET 216
P + + S+D++VK WD T
Sbjct: 242 PDDTHFVSSSSDKSVKVWDAGT 263
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 293 (108.2 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/207 (30%), Positives = 94/207 (45%)
Query: 7 YKLQEFV-AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
YKL + HS VNC+ + S+ TG D + +W + L+L+GH + I +
Sbjct: 276 YKLYRVILGHSGWVNCVDVDI-SNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ + +K WDLE K++R GH S + HP + SG D +
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WDIR K + GHT V +I VVSG +D ++LWDL GK H+
Sbjct: 395 RVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFW 212
I+ + HP E+ + D VK W
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 241 (89.9 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 57/206 (27%), Positives = 93/206 (45%)
Query: 92 KIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
K+ R + GH NC+ VD E+FA+GS D +KIWD+ T GH + I
Sbjct: 277 KLYRVILGHSGWVNCVDVDIS--NEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 150 RFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTV 209
+ + ++ S GEDN VK WDL K++ D+ H + C+ HP LL +G D V
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 210 KFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGW 268
+ WD+ T + T V + ++ G + + +++ +C ++
Sbjct: 395 RVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 269 SRLSDLNVHEGKLLGCSYNQSCVGVW 294
+ L++H + CS V VW
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDNVKVW 480
Score = 232 (86.7 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 55/198 (27%), Positives = 89/198 (44%)
Query: 57 GHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
GH+ ++ V D S A G+ IK+WDL K+ TLTGH ++ + +
Sbjct: 284 GHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYL 343
Query: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK 176
S D +K WD+ I Y GH GV + P ++SGG D V++WD+
Sbjct: 344 FSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKS 403
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN 236
+ H G + I E + +GS D+ ++ WDL + S +R L+ +
Sbjct: 404 SVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIH 463
Query: 237 PDGRTLL-CGLHESLKVF 253
P + CG +++KV+
Sbjct: 464 PFEYSFCSCGT-DNVKVW 480
Score = 208 (78.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 60/217 (27%), Positives = 98/217 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++++ H S V CL + S +L++GG D V +W I +++ LSGHT + S+
Sbjct: 363 IRDYHGHLSGVYCLSL-HPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S E V +G+ I+LWDL K +LT H+ + S+ HPF F S D N+K+W
Sbjct: 422 SVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTD-NVKVW 480
Query: 129 DIRKKGCIHTYKGHTRGVNA--IRFTP---DGRWVVSGGEDNTVKLWDLTAGKLLHDF-- 181
G +N I+ P D ++ G + + +D ++G
Sbjct: 481 CGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSN 540
Query: 182 KCHEGQIQC------IDFHPHEFLLATGSADRTVKFW 212
K G ++C + F E L T D+++K W
Sbjct: 541 KVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIW 577
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 293 (108.2 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/207 (30%), Positives = 94/207 (45%)
Query: 7 YKLQEFV-AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
YKL + HS VNC+ + S+ TG D + +W + L+L+GH + I +
Sbjct: 276 YKLYRVILGHSGWVNCVDVDI-SNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ + +K WDLE K++R GH S + HP + SG D +
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WDIR K + GHT V +I VVSG +D ++LWDL GK H+
Sbjct: 395 RVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFW 212
I+ + HP E+ + D VK W
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDN-VKVW 480
Score = 241 (89.9 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 57/206 (27%), Positives = 93/206 (45%)
Query: 92 KIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
K+ R + GH NC+ VD E+FA+GS D +KIWD+ T GH + I
Sbjct: 277 KLYRVILGHSGWVNCVDVDIS--NEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 150 RFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTV 209
+ + ++ S GEDN VK WDL K++ D+ H + C+ HP LL +G D V
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVV 394
Query: 210 KFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIRCHDAVDVGW 268
+ WD+ T + T V + ++ G + + +++ +C ++
Sbjct: 395 RVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHK 454
Query: 269 SRLSDLNVHEGKLLGCSYNQSCVGVW 294
+ L++H + CS V VW
Sbjct: 455 KSIRSLSIHPFEYSFCSCGTDNVKVW 480
Score = 232 (86.7 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 55/198 (27%), Positives = 89/198 (44%)
Query: 57 GHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
GH+ ++ V D S A G+ IK+WDL K+ TLTGH ++ + +
Sbjct: 284 GHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKKNPYL 343
Query: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK 176
S D +K WD+ I Y GH GV + P ++SGG D V++WD+
Sbjct: 344 FSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKS 403
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFN 236
+ H G + I E + +GS D+ ++ WDL + S +R L+ +
Sbjct: 404 SVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIH 463
Query: 237 PDGRTLL-CGLHESLKVF 253
P + CG +++KV+
Sbjct: 464 PFEYSFCSCGT-DNVKVW 480
Score = 208 (78.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 60/217 (27%), Positives = 98/217 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++++ H S V CL + S +L++GG D V +W I +++ LSGHT + S+
Sbjct: 363 IRDYHGHLSGVYCLSL-HPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQ 421
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S E V +G+ I+LWDL K +LT H+ + S+ HPF F S D N+K+W
Sbjct: 422 SVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRSLSIHPFEYSFCSCGTD-NVKVW 480
Query: 129 DIRKKGCIHTYKGHTRGVNA--IRFTP---DGRWVVSGGEDNTVKLWDLTAGKLLHDF-- 181
G +N I+ P D ++ G + + +D ++G
Sbjct: 481 CGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSN 540
Query: 182 KCHEGQIQC------IDFHPHEFLLATGSADRTVKFW 212
K G ++C + F E L T D+++K W
Sbjct: 541 KVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIW 577
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 271 (100.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 68/236 (28%), Positives = 112/236 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P + F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G + +G +D + +L+DL A + L + HE I + F L
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYS-HESIICGITSVAFSLSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD E +G+ + V CL DG + G +S LK+++
Sbjct: 285 LFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 58/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G + G + S ++F + H+++ G + ++ ++ G+LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGITSVA-FSL-SGRLLF 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISG 202
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 271 (100.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 83/310 (26%), Positives = 146/310 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKS---SRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
M+T+ + ++ AH + + G+ S S ++++G D V +W L +L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV S ++A+ + I+LWDLE K +R + + SV F P +
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQH 120
Query: 116 FASGSLDTNLKIWDIR--KKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWD 171
A+GS + I+ + KK Y TRG + +I ++PDG+++ SG D + ++D
Sbjct: 121 LATGSHVGKVNIFGVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
+ GKLLH + H I+ + F P LL T S D +K ++++ L + S V
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL 236
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
+ F+PD + + S+KV+ C H +D H+ ++ G YN++
Sbjct: 237 NVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLD-----------HQDQVWGVKYNKN 285
Query: 290 CVGVWVVDIS 299
G +V ++
Sbjct: 286 --GSKIVSVA 293
Score = 223 (83.6 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 50/185 (27%), Positives = 91/185 (49%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S+ L TG KVN++ + SL I S+++ +A+GA G I ++D+
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
K++ TL GH S+ F P + + S D +KI++++ T GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLN 237
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ F+PD VS D +VK+WD++A +H F H+ Q+ + ++ + + + + D+
Sbjct: 238 VAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQE 297
Query: 209 VKFWD 213
+ +D
Sbjct: 298 IHVYD 302
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 292 (107.8 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 69/221 (31%), Positives = 106/221 (47%)
Query: 8 KLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLS----GHTSGI 62
K+Q F H + L R +V+G D K +W I K +L G +G+
Sbjct: 360 KIQHTFYGHELDIYSLDYS-SDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGV 418
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
SV+ LVAAG+ ++LWD + + GH + SV F P G+ ASGSLD
Sbjct: 419 TSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLD 478
Query: 123 TNLKIWDI---RKKG-CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLL 178
+LK+WD+ R + C T+ GH V ++ F+PDG W++SG +D +V+ WD G
Sbjct: 479 KSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTH 538
Query: 179 HDFKCHEGQIQCIDFHPHEF---LLATGSADRTVKFWDLET 216
+ H+ + + P + ATGS D + W ++
Sbjct: 539 MMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 282 (104.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 62/190 (32%), Positives = 96/190 (50%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L TG ED V +W I + GH I S+ + S + +G+ K+WD+E+
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKG 401
Query: 92 KIVRTL----TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
K TL G ++ SV P G A+GSLD +++WD + + Y+GH V
Sbjct: 402 KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVY 461
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH----DFKCHEGQIQCIDFHPHEFLLATG 203
++ F+PDG+ + SG D ++KLWDL+ + F H+ + + F P L +G
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISG 521
Query: 204 SADRTVKFWD 213
S DR+V+FWD
Sbjct: 522 SKDRSVQFWD 531
Score = 250 (93.1 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 70/254 (27%), Positives = 118/254 (46%)
Query: 58 HTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN-----CISVDFHPF 112
H S + V+F + +A G + + +++D++ K V SV F P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
G + A+G+ D +K+WDI K HT+ GH + ++ ++ DGR++VSG D K+WD+
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 173 TAGKLLHDFKCHE-GQ---IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
GK E G + + P L+A GS D V+ WD +T +
Sbjct: 399 EKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLD 458
Query: 229 GVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRL-SDLNVHEGKLLGCSY 286
V + F+PDG++L G L +SLK++ R SR + N H+ +L ++
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSR-------SRCRATFNGHKDFVLSVAF 511
Query: 287 NQSCVGVWVVDISR 300
+ G W++ S+
Sbjct: 512 SPD--GSWLISGSK 523
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 292 (107.8 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 61/204 (29%), Positives = 104/204 (50%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED + W +G N +L GH + + + A+G+ T +LW +
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVL-YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 433
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH ++ V FHP + A+GS D +++W ++ + + GH V ++
Sbjct: 434 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 493
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L + + H I + F P L+A+ S D +V+
Sbjct: 494 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVR 553
Query: 211 FWDLE-TF---ELIGSAGPETSGV 230
WD+ T+ GS+G E GV
Sbjct: 554 VWDIRNTYCSTPADGSSG-ELVGV 576
Score = 260 (96.6 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 64/230 (27%), Positives = 102/230 (44%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDL GH +D P+
Sbjct: 356 LRGHCGPVYSTRFLADSSGLLSCSEDMS--IRYWDLGSFTNTVLYQGHAYPVWDLDISPY 413
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
+FASGS D ++W + + Y GH V+ ++F P+ ++ +G D TV+LW
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC 232
G + F H G + + F P+ LA+ D+ +K WDL + L T +
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 233 LTFNPDGRTLL-CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKL 281
LTF+PD + + S++V+ C D L + V+ G++
Sbjct: 534 LTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGEL--VGVYTGQM 581
Score = 254 (94.5 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +G D LW+ + + +GH + +D V F + +A G+ T++LW
Sbjct: 414 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 473
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ VR TGHR +S+ F P G++ AS D LK+WD+ +GHT + +
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDL 172
+ F+PD + S DN+V++WD+
Sbjct: 534 LTFSPDSSLIASASMDNSVRVWDI 557
Score = 219 (82.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H + V+C+K +S L TG D V LW+ + N++ +GH + S
Sbjct: 433 RTYPLRIYAGHLADVDCVKF-HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 491
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
++F + +A+ +KLWDL + + L GH N S+ F P AS S+D +
Sbjct: 492 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNS 551
Query: 125 LKIWDIRKKGC 135
+++WDIR C
Sbjct: 552 VRVWDIRNTYC 562
Score = 186 (70.5 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 62/248 (25%), Positives = 99/248 (39%)
Query: 12 FVAHSSTVNCLKIGRKS--SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
F A +T L S S++L G ++ + LW++ L H + + +
Sbjct: 279 FYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKK--LKSEPHQVDVSRIHL-A 335
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
++L E KI+R GH S F S S D +++ WD
Sbjct: 336 CDILEEEDDEDDNAGT----EMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWD 388
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
+ Y+GH V + +P + SG D T +LW L + H +
Sbjct: 389 LGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD 448
Query: 190 CIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHE 248
C+ FHP+ LATGS D+TV+ W + + V L F+P+G+ L G +
Sbjct: 449 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ 508
Query: 249 SLKVFSWE 256
LK+ W+
Sbjct: 509 RLKL--WD 514
Score = 124 (48.7 bits), Expect = 0.00044, P = 0.00044
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H V L + + L + GED ++ LW + L GHT I S++F
Sbjct: 482 FTGHRGPVLSLAFS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS 540
Query: 72 VLVAAGAASGTIKLWDLEEA-----------KIVRTLTGHRSNCISVDFHPFGEFFASGS 120
L+A+ + ++++WD+ ++V TG SN +SV F +G
Sbjct: 541 SLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGI 600
Query: 121 LDTN 124
N
Sbjct: 601 TQEN 604
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 270 (100.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 59/211 (27%), Positives = 107/211 (50%)
Query: 6 AYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
A K + H+S ++C I S + ++TG D LW + + S GH+ + ++
Sbjct: 148 AAKKRTVGTHTSYMSCC-IYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAI 206
Query: 66 SFDSSEV--LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
+E +G+ +WD+ +V++ GH+S+ SV FHP G+ A+GS D+
Sbjct: 207 DLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDS 266
Query: 124 NLKIWDIR--KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
+ +++D+R ++ + + GVN++ F+ GR + +G D TV LWD + +
Sbjct: 267 SCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLL 326
Query: 182 KCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
HE ++ C+ P L+TGS D T++ W
Sbjct: 327 YGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 265 (98.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 63/227 (27%), Positives = 110/227 (48%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILS----LSGHTSGIDSVSFDSSEVLVAAGAASGTI 83
S + GG D+KV ++ I + + + HTS + + +S+ + G+ T
Sbjct: 123 SGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTC 182
Query: 84 KLWDLEEAKIVRTLTGHRSNCISVDFHP--FGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
LWD+E +++++ GH + +++D P G F SGS D IWD+R + +++G
Sbjct: 183 ALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEG 242
Query: 142 HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE---GQIQCIDFHPHEF 198
H VN+++F P G + +G +D++ +L+D+ A + + F G + +DF
Sbjct: 243 HQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFG-VNSVDFSVSGR 301
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
LL G D TV WD E + + V C+ +PDG L G
Sbjct: 302 LLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTG 348
Score = 219 (82.2 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 58/253 (22%), Positives = 115/253 (45%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + V C R +++ +D ++ +W N +++ T+ I + ++ S V
Sbjct: 69 HQAKVLCTDWS-PDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFV 127
Query: 75 AAGAASGTIKLWDL---EEAKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKIWDI 130
A G + ++ + EE + G ++ +S +P + +GS D+ +WD+
Sbjct: 128 ACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDV 187
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPD--GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+ ++ GH+ V AI P+ G VSG D +WD+ +G ++ F+ H+ +
Sbjct: 188 ESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDV 247
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS--GVRCLTFNPDGRTLLCGL 246
+ FHP +ATGS D + + +D+ + E+ GV + F+ GR L G
Sbjct: 248 NSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGY 307
Query: 247 HESLKVFSWEPIR 259
++ V W+ ++
Sbjct: 308 ND-YTVNLWDTLK 319
Score = 212 (79.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/259 (23%), Positives = 114/259 (44%)
Query: 48 KPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISV 107
KP +L GH + + + + + + + G + +WD +T + ++
Sbjct: 61 KPRKVLK--GHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMAC 118
Query: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---G-HTRGVNAIRFTPDGRWVVSGGE 163
+ P G F A G LD + ++ I + K G HT ++ + + +++G
Sbjct: 119 AYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSG 178
Query: 164 DNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF--LLATGSADRTVKFWDLETFELIG 221
D+T LWD+ +G+LL F H G + ID P+E +GS DR WD+ + ++
Sbjct: 179 DSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQ 238
Query: 222 SAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFSWEPIR-----CHDAVDVGWSRLSDLN 275
S S V + F+P G + G +S +++ R +++ G + + D +
Sbjct: 239 SFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSV-DFS 297
Query: 276 VHEGKLLGCSYNQSCVGVW 294
V G+LL YN V +W
Sbjct: 298 V-SGRLLFAGYNDYTVNLW 315
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 61/254 (24%), Positives = 102/254 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
+ L GH++ + D+ P S S D L IWD H T + A + P
Sbjct: 64 KVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPS 123
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFK----CHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN V ++ +T+ + + K H + C + + + TGS D T
Sbjct: 124 GNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCA 183
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPD--GRTLLCGLHESLKVFSWEPIRCHDAVDVGW 268
WD+E+ +L+ S + V + P+ G T + G + + F W+ +R V
Sbjct: 184 LWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRM-AFIWD-MRSGHVVQSFE 241
Query: 269 SRLSDLN---VHE-GKLLGCSYNQSCVGVWVVDISRIEPYTIGSVTRVNGLSESKSSASG 324
SD+N H G + + S ++ + R E + + G++ S SG
Sbjct: 242 GHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR-EVAVFAKESIIFGVNSVDFSVSG 300
Query: 325 NLSVLNENSAKASL 338
L N +L
Sbjct: 301 RLLFAGYNDYTVNL 314
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI--GKPNAILSLSGHTSG 61
+ + +Q F H S VN +K + TG +D L+ + + A+ + G
Sbjct: 232 RSGHVVQSFEGHQSDVNSVKF-HPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFG 290
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
++SV F S L+ AG T+ LWD +++ V L GH + V P G ++GS
Sbjct: 291 VNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSW 350
Query: 122 DTNLKIW 128
D +++W
Sbjct: 351 DYTIRVW 357
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 270 (100.1 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 73/264 (27%), Positives = 129/264 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIG---RKSSRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MT + + ++ AH + + G +++S +VTG D V +W L SL
Sbjct: 1 MTNQYSILFKQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + ++ F P ++
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
A+G+ + I+ + + G Y TRG + +I ++PDG+++ SG D + ++D+
Sbjct: 121 LATGTHVGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 234 TFNPDGRTLLCGLHE-SLKVFSWE 256
F PD + + S+KV W+
Sbjct: 239 AFCPDDTHFVSSSSDKSVKV--WD 260
Score = 224 (83.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 43/142 (30%), Positives = 78/142 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + C+HT+ H V +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ +G +VS G+D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHIYD 302
Score = 216 (81.1 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 47/206 (22%), Positives = 97/206 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + LW + I S+ +++F +A G G + ++ +E K +L
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 144
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
+S+ + P G++ ASG++D + I+DI +HT +GH + ++ F+PD +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+V+ +D +K++D+ L H + + F P + + S+D++VK WD+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 218 ELIGSAGPETSGVRCLTFNPDGRTLL 243
+ + V + +N +G ++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIV 290
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 292 (107.8 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 74/237 (31%), Positives = 105/237 (44%)
Query: 7 YKLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
YKL+ F H V+C+ + + +LV+ GED + + K N +L+ GHT +
Sbjct: 342 YKLKNIFRLHELPVSCVSM-QPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDC 400
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
F S +A + T+KLWDL + + T GH S +H G F AS SLD
Sbjct: 401 CFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTS 460
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
KIWD+ + C T GHT VN+I F P +++ D T+ +WD G H
Sbjct: 461 KIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHM 520
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL 242
I F P ++A+ A K WD I S S + F+ GR L
Sbjct: 521 HSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVL 577
Score = 185 (70.2 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 54/204 (26%), Positives = 84/204 (41%)
Query: 12 FVAHSSTV-NCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSS 70
F HS V +C + + D +W + +L GHT ++S+ F
Sbjct: 432 FEGHSRAVWSCT--WHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPF 489
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ +A T+ +WD ++L GH + F P G AS K+WD
Sbjct: 490 SNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDF 549
Query: 131 RKKGCIHTYK-GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
RK I + G + G N + F GR + + + L DL +G++ H HE +
Sbjct: 550 RKLLPIVSIDIGPSPG-NEVNFDSSGRVLAQASGNGVIHLLDLKSGEI-HKLMGHENEAH 607
Query: 190 CIDF-HPHEFLLATGSADRTVKFW 212
+ F H E L + GS D TV+ W
Sbjct: 608 TVVFSHDGEILFSGGS-DGTVRTW 630
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/141 (28%), Positives = 62/141 (43%)
Query: 103 NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGG 162
+C+S+ P + S D K+ + K + T GHT ++ F P G + +
Sbjct: 356 SCVSMQ--PHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSS 413
Query: 163 EDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
D TVKLWDL G + F+ H + +H +A+ S D+T K WD+ + +
Sbjct: 414 GDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCT 473
Query: 223 AGPETSGVRCLTFNPDGRTLL 243
T V + F P TLL
Sbjct: 474 LYGHTDSVNSIEFFPFSNTLL 494
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 292 (107.8 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 64/190 (33%), Positives = 97/190 (51%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ F H++ V CL+ +L TG D + +W + +L GH SGI + FD
Sbjct: 342 IKTFKGHTNGVMCLQF---EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFD 398
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++++ +G+ TIK+W+ + + T TGHR I + F ASGS+D +KIW
Sbjct: 399 DTKLI--SGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFD--ASILASGSVDKTVKIW 454
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+ K + +GHT VNA+R R V S +D TV+LWDL + F H GQ+
Sbjct: 455 NFEDKSTF-SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Query: 189 QCIDFHPHEF 198
Q + P EF
Sbjct: 514 QQVVPLPREF 523
Score = 249 (92.7 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 57/173 (32%), Positives = 87/173 (50%)
Query: 44 WAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN 103
W G+ + I + GHT+G+ + F+ + ++A G+ TIK+WD E + +RTL GH S
Sbjct: 335 WKYGRCS-IKTFKGHTNGVMCLQFEDN--ILATGSYDTTIKIWDTETGEELRTLRGHESG 391
Query: 104 CISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGE 163
+ F SGS+D +K+W+ R CI TY GH GV + F D + SG
Sbjct: 392 IRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DASILASGSV 447
Query: 164 DNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
D TVK+W+ K + H + + + + S D TV+ WDL+T
Sbjct: 448 DKTVKIWNFE-DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDT 499
Score = 209 (78.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 50/166 (30%), Positives = 80/166 (48%)
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
++T GH + + + F A+GS DT +KIWD + T +GH G+ ++F
Sbjct: 342 IKTFKGHTNGVMCLQFED--NILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQF-- 397
Query: 154 DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
D ++SG D T+K+W+ G+ + + H G + I H +LA+GS D+TVK W+
Sbjct: 398 DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGV--IGLHFDASILASGSVDKTVKIWN 455
Query: 214 LE---TFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
E TF L G T V + + RT+ + V W+
Sbjct: 456 FEDKSTFSLRG----HTDWVNAVRVDTSSRTVFSA-SDDCTVRLWD 496
Score = 185 (70.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 57/218 (26%), Positives = 90/218 (41%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV-----SFDS 69
H+ VN +++ SSR + + +D V LW + I + GH + V F+
Sbjct: 467 HTDWVNAVRVDT-SSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEF 525
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG---------- 119
E + D + I ++ G N FG F +G
Sbjct: 526 EEHDAECENDDLSTTSGDADPPSIQASM-GLEPNAAYSQSSAFGTSFDNGRAAPPRYMVT 584
Query: 120 -SLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLL 178
+LD+ +++W+ C+ T+ GH GV A+ D +VSG ED +K+WD GK
Sbjct: 585 SALDSTIRLWETTTGRCLRTFFGHLEGVWALG--ADTLRIVSGAEDRMIKIWDPRTGKCE 642
Query: 179 HDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
F H G + CI F ATGS D V+ + ++
Sbjct: 643 RTFTGHSGPVTCIGLGDSRF--ATGSEDCEVRMYSFQS 678
Score = 147 (56.8 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
FK H + C+ F + +LATGS D T+K WD ET E + + SG+RCL F+ D +
Sbjct: 345 FKGHTNGVMCLQFEDN--ILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFD-DTK 401
Query: 241 TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD 297
+ + ++KV++W C +S H G ++G ++ S + VD
Sbjct: 402 LISGSMDRTIKVWNWRTGEC----------ISTYTGHRGGVIGLHFDASILASGSVD 448
Score = 44 (20.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 502 SVLCENTGSKATEVSSVADRNTFAAIKGSIQGVS-VTERNSKEDIFTVS 549
S+L + K ++ + D++TF+ ++G V+ V S +F+ S
Sbjct: 440 SILASGSVDKTVKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSRTVFSAS 487
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 269 (99.8 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 73/264 (27%), Positives = 128/264 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIG---RKSSRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MT + ++ AH + + G +++S +VTG D V +W L SL
Sbjct: 1 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + ++ F P ++
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
A+G+ + I+ + + G Y TRG + +I ++PDG+++ SG D + ++D+
Sbjct: 121 LATGTHVGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 234 TFNPDGRTLLCGLHE-SLKVFSWE 256
F PD + + S+KV W+
Sbjct: 239 AFCPDDTHFVSSSSDKSVKV--WD 260
Score = 216 (81.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 47/206 (22%), Positives = 97/206 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + LW + I S+ +++F +A G G + ++ +E K +L
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 144
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
+S+ + P G++ ASG++D + I+DI +HT +GH + ++ F+PD +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+V+ +D +K++D+ L H + + F P + + S+D++VK WD+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 218 ELIGSAGPETSGVRCLTFNPDGRTLL 243
+ + V + +N +G ++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIV 290
Score = 212 (79.7 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 48/166 (28%), Positives = 79/166 (47%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S+ L TG KVN++ + SL I S+++ +A+GA G I ++D+
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
K++ TL GH S+ F P + + S D +KI+D++ T GH V
Sbjct: 178 ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 237
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+ F PD VS D +VK+WD+ +H F H+ Q+ + ++
Sbjct: 238 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 283
Score = 207 (77.9 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 41/134 (30%), Positives = 73/134 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + C+HT+ H V +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGE 163
++ +G +VS G+
Sbjct: 281 KYNGNGSKIVSVGD 294
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 269 (99.8 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 73/264 (27%), Positives = 128/264 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIG---RKSSRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MT + ++ AH + + G +++S +VTG D V +W L SL
Sbjct: 1 MTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + ++ F P ++
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
A+G+ + I+ + + G Y TRG + +I ++PDG+++ SG D + ++D+
Sbjct: 121 LATGTHVGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 234 TFNPDGRTLLCGLHE-SLKVFSWE 256
F PD + + S+KV W+
Sbjct: 239 AFCPDDTHFVSSSSDKSVKV--WD 260
Score = 224 (83.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 43/142 (30%), Positives = 78/142 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + C+HT+ H V +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ +G +VS G+D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHIYD 302
Score = 216 (81.1 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 47/206 (22%), Positives = 97/206 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + LW + I S+ +++F +A G G + ++ +E K +L
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 144
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
+S+ + P G++ ASG++D + I+DI +HT +GH + ++ F+PD +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+V+ +D +K++D+ L H + + F P + + S+D++VK WD+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 218 ELIGSAGPETSGVRCLTFNPDGRTLL 243
+ + V + +N +G ++
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIV 290
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 290 (107.1 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 54/184 (29%), Positives = 95/184 (51%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED + W +G N +L GH + + + A+G+ T +LW +
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVL-YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDR 415
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH ++ V FHP + A+GS D +++W ++ + + GH V ++
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L + + H I + F P L+A+ S D +V+
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVR 535
Query: 211 FWDL 214
WD+
Sbjct: 536 VWDI 539
Score = 264 (98.0 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 66/230 (28%), Positives = 103/230 (44%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDL GH +D P+
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMS--IRYWDLGSFTNTVLYQGHAYPVWDLDISPY 395
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
+FASGS D ++W + + Y GH V+ ++F P+ ++ +G D TV+LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC 232
G + F H G + + F P+ LA+ D+ +K WDL + L T +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 233 LTFNPD-GRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKL 281
LTF+PD G + S++V+ C D S L + V+ G++
Sbjct: 516 LTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSEL--VGVYTGQM 563
Score = 253 (94.1 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S +G D LW+ + + +GH + +D V F + +A G+ T++LW
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ VR TGHR +S+ F P G++ AS D LK+WD+ +GHT + +
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDL 172
+ F+PD + S DN+V++WD+
Sbjct: 516 LTFSPDSGLIASASMDNSVRVWDI 539
Score = 217 (81.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H + V+C+K +S L TG D V LW+ + N++ +GH + S
Sbjct: 415 RTYPLRIYAGHLADVDCVKF-HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
++F + +A+ +KLWDL + + L GH N S+ F P AS S+D +
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNS 533
Query: 125 LKIWDIRKKGC 135
+++WDIR C
Sbjct: 534 VRVWDIRNTYC 544
Score = 186 (70.5 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 62/248 (25%), Positives = 99/248 (39%)
Query: 12 FVAHSSTVNCLKIGRKS--SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
F A +T L S S++L G ++ + LW++ L H + + +
Sbjct: 261 FYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKK--LKSEPHQVDVSRIHL-A 317
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
++L E KI+R GH S F S S D +++ WD
Sbjct: 318 CDILEEEDDEDDNAGT----EMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWD 370
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
+ Y+GH V + +P + SG D T +LW L + H +
Sbjct: 371 LGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVD 430
Query: 190 CIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHE 248
C+ FHP+ LATGS D+TV+ W + + V L F+P+G+ L G +
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ 490
Query: 249 SLKVFSWE 256
LK+ W+
Sbjct: 491 RLKL--WD 496
Score = 124 (48.7 bits), Expect = 0.00042, P = 0.00042
Identities = 31/124 (25%), Positives = 52/124 (41%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H V L + + L + GED ++ LW + L GHT I S++F
Sbjct: 464 FTGHRGPVLSLAFS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS 522
Query: 72 VLVAAGAASGTIKLWDLEE-----------AKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
L+A+ + ++++WD+ +++V TG SN +SV F +G
Sbjct: 523 GLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGI 582
Query: 121 LDTN 124
N
Sbjct: 583 TQEN 586
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T TGH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G +++L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET--SGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + + + + G+ ++F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + +S G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T TGH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G +++L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET--SGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + + + + G+ ++F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + +S G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T TGH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G +++L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET--SGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + + + + G+ ++F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + +S G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T TGH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G +++L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET--SGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + + + + G+ ++F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + +S G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T TGH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 77/289 (26%), Positives = 128/289 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G +++L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET--SGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + + + + G+ ++F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 59/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + +S G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 154 (59.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 8 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 65
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T TGH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 66 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 125
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 126 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRL 184
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 185 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 170 (64.9 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/196 (25%), Positives = 84/196 (42%)
Query: 109 FHPFGEFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGED 164
+ P G + A G LD I++++ ++G + + GHT ++ RF D + V S G D
Sbjct: 5 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-D 63
Query: 165 NTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAG 224
T LWD+ G+ F H G + + P L +G+ D + K WD+ +
Sbjct: 64 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 123
Query: 225 PETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEPIR-----CHDAVDVGWSRLSDLNVHE 278
S + + F P+G G ++ ++F + HD + G + +S
Sbjct: 124 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK--S 181
Query: 279 GKLLGCSYNQSCVGVW 294
G+LL Y+ VW
Sbjct: 182 GRLLLAGYDDFNCNVW 197
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 292 (107.8 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 60/219 (27%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 508 MDEKTASELKILYGHSGPVYGTSFS-PDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNY 566
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ FHP + A+GS
Sbjct: 567 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGS 626
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 627 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGE 686
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H I + F +LA+GS D TV+ WD ++ FE
Sbjct: 687 LKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFE 725
Score = 277 (102.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 58/211 (27%), Positives = 97/211 (45%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH V RF P+ ++ +G D TV+LWD+
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLN 638
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T + L
Sbjct: 639 GNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALR 698
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ ++ + ++
Sbjct: 699 FSRDGEILASGSMDNT-VRLWDAVKAFEDLE 728
Score = 264 (98.0 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 65/228 (28%), Positives = 106/228 (46%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S ++V G D V +W++ P + S+ + + + +S +VL ++ D
Sbjct: 462 SSMIVGGFADSTVRVWSV-TPKKLRSVKA-AADLSLIDKESDDVLE---------RIMDE 510
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
+ A ++ L GH F P + S S D +++W ++ C+ YKGH V
Sbjct: 511 KTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 570
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+F+P G + VSGG D +LW + L F H + C FHP+ +ATGSADRT
Sbjct: 571 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRT 630
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
V+ WD+ + + L F+P+GR L G + +V W+
Sbjct: 631 VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG-RVLLWD 677
Score = 158 (60.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 42/185 (22%), Positives = 75/185 (40%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V ++ G A T+++W + K+ RS + D S
Sbjct: 452 GLTAVDITDDSSMIVGGFADSTVRVWSVTPKKL-------RSVKAAADL----SLIDKES 500
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +I D + + GH+ V F+PD +++S ED TV+LW L L
Sbjct: 501 DDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVG 560
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P+ + +G DR + W + ++ + + V C F+P+
Sbjct: 561 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 620
Query: 241 TLLCG 245
+ G
Sbjct: 621 YIATG 625
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 288 (106.4 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 59/219 (26%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 288 MDEKTASELKILYGHSGPVYGASFS-PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 346
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ FHP + A+GS
Sbjct: 347 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGS 406
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 407 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGE 466
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H + + F +LA+GS D TV+ WD ++ FE
Sbjct: 467 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 505
Score = 287 (106.1 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 61/211 (28%), Positives = 98/211 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH VN RF P+ +V +G D TV+LWD+
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 418
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T V L
Sbjct: 419 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR 478
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ ++ + ++
Sbjct: 479 FSRDGEILASGSMDNT-VRLWDAVKAFEDLE 508
Score = 271 (100.5 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 66/226 (29%), Positives = 106/226 (46%)
Query: 32 LVTGG-EDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L+ GG D V +W++ P + S+ + + + +S +VL ++ D +
Sbjct: 244 LIAGGFADSTVRVWSV-TPKKLRSVK-QAADLSLIDKESDDVLE---------RIMDEKT 292
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
A ++ L GH F P + S S D +++W ++ C+ YKGH V +
Sbjct: 293 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 352
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P G + VSGG D +LW + L F H + C FHP+ +ATGSADRTV+
Sbjct: 353 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 412
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ + + LTF+P+GR L G + +V W+
Sbjct: 413 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 457
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 45/191 (23%), Positives = 79/191 (41%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L+ + G+ +V L+A G A T+++W + K+ RS + D
Sbjct: 226 LNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-------RSVKQAADL----S 274
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
S D +I D + + GH+ V F+PD +++S ED TV+LW L
Sbjct: 275 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT 334
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
L +K H + F P+ + +G DR + W + ++ + + V C
Sbjct: 335 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 394
Query: 235 FNPDGRTLLCG 245
F+P+ + G
Sbjct: 395 FHPNSNYVATG 405
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 287 (106.1 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 72/287 (25%), Positives = 130/287 (45%)
Query: 5 RAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
R +KL ++ H V L + ++ +G D + +W + L+L+GH S +
Sbjct: 189 RPWKLMRVISGHLGWVRALAV-EPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVR 247
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
++ + + A +K WDLE K++R GH S ++ HP + +G D
Sbjct: 248 GLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDG 307
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
++WD+R + IH GHT V+ + V++G D+TV++WDL AGK +
Sbjct: 308 VARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTH 367
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H+ ++ + HP EF A+GSA ++K W + + S + L+ N D
Sbjct: 368 HKKGVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVN-DQNVFF 425
Query: 244 CGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
G S+ + W+ ++D ++ L G + +++QS
Sbjct: 426 SGADNGSMSFWDWKTGHRFQSLDTT-AQPGSLQAESG-IFTSTFDQS 470
Score = 218 (81.8 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 57/248 (22%), Positives = 110/248 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H STV L + + L + ED V W + I GH SG+ +++ + ++
Sbjct: 242 HISTVRGLAVSPRHP-YLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVL 300
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G G ++WD+ + L+GH + +GSLD+ +++WD+
Sbjct: 301 VTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGK 360
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
+ H +GV A+ P + + G ++K W G + +F+ H I + +
Sbjct: 361 TMGVLTHHKKGVRALATHPT-EFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTLSVN 419
Query: 195 PHEFLLATGSADRTVKFWDLET---FELIGS-AGPET----SGVRCLTFNPDGRTLLCG- 245
+ G+ + ++ FWD +T F+ + + A P + SG+ TF+ G L+CG
Sbjct: 420 DQNVFFS-GADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGE 478
Query: 246 LHESLKVF 253
+++K++
Sbjct: 479 ADKTIKIW 486
Score = 216 (81.1 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 63/227 (27%), Positives = 98/227 (43%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + VLVTGG D +W + + I LSGHT + +
Sbjct: 278 IRHYHGHLSGVYTLAL-HPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQ 336
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++ V G+ T+++WDL K + LT H+ ++ HP FASGS + +K W
Sbjct: 337 EADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGS-IKQW 395
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH--DFKCHEG 186
+ + ++GH +N + D SG ++ ++ WD G D G
Sbjct: 396 KCPEGAFMQNFEGHNSIINTLSVN-DQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPG 454
Query: 187 QIQCID------FHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
+Q F L G AD+T+K W E E A PET
Sbjct: 455 SLQAESGIFTSTFDQSGSRLICGEADKTIKIWK-EDME----ATPET 496
Score = 139 (54.0 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+ TV+ L + +++ ++TG D V +W + + L+ H G+ +++ +E
Sbjct: 326 HTGTVSEL-VCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTF 384
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR--- 131
A+G+A G+IK W E ++ GH S ++ + FF SG+ + ++ WD +
Sbjct: 385 ASGSA-GSIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFF-SGADNGSMSFWDWKTGH 442
Query: 132 KKGCIHT--YKGHTR---GVNAIRFTPDGRWVVSGGEDNTVKLW--DLTAGKLLH--DFK 182
+ + T G + G+ F G ++ G D T+K+W D+ A H D+K
Sbjct: 443 RFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIWKEDMEATPETHPLDWK 502
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 267 (99.0 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 55/211 (26%), Positives = 105/211 (49%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
++++ HSS VN R+ ++++G +D LW + + AI + I +VSF
Sbjct: 130 QIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSF 188
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
+ + G +K+WDL + + TL GH+ + P G + + +D L +
Sbjct: 189 SDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCV 248
Query: 128 WDIR----KKGCIHTYKGHTRGV--NAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
WD+R + C+ ++GH N ++ ++PDG V +G D V +WD T+ + ++
Sbjct: 249 WDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIY 308
Query: 180 DFKCHEGQI-QCIDFHPHEFLLATGSADRTV 209
H G + +C+ FHP E ++ + S+D+ +
Sbjct: 309 KLPGHTGSVNECV-FHPTEPIIGSCSSDKNI 338
Score = 233 (87.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 54/207 (26%), Positives = 95/207 (45%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAILSLSGHTSGIDSVSFDSSEVL 73
H S V +K + ++ +G D ++ LW + G + L GH + I + + S
Sbjct: 52 HPSAVYTMKFN-PAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRS---NCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T++ WD+E K ++ + H S +C P SGS D K+WD+
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP--PLIISGSDDGTAKLWDM 168
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
R++G I T+ + + A+ F+ + +GG DN VK+WDL G+ + H+ I
Sbjct: 169 RQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETF 217
+ P L T D + WD+ +
Sbjct: 228 MSLSPDGSYLLTNGMDNKLCVWDMRPY 254
Score = 220 (82.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 59/209 (28%), Positives = 95/209 (45%)
Query: 52 ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-EAKIVRTLTGHRSNCISVDFH 110
I+ LSGH S + ++ F+ + L+A+G+ I LW + + K L GH++ + + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR-WVVSGGEDNTVKL 169
G S S D ++ WD+ I H+ VN+ T G ++SG +D T KL
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F + QI + F + TG D VK WDL E +
Sbjct: 166 WDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDT 224
Query: 230 VRCLTFNPDGRTLLC-GLHESLKVFSWEP 257
+ ++ +PDG LL G+ L V+ P
Sbjct: 225 ITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Score = 219 (82.2 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 53/216 (24%), Positives = 99/216 (45%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS-FDSSEVLVAAGAASGTIKLWDLEE 90
+V+ D V W + I ++ H+S ++S L+ +G+ GT KLWD+ +
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
++T + +V F + +G +D ++K+WD+RK T +GH + +
Sbjct: 171 RGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMS 229
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTA----GKLLHDFKCHEGQ-----IQCIDFHPHEFLLA 201
+PDG ++++ G DN + +WD+ + + F+ H+ ++C + P +
Sbjct: 230 LSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC-SWSPDGTKVT 288
Query: 202 TGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP 237
GS+DR V WD + I T V F+P
Sbjct: 289 AGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHP 324
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/171 (28%), Positives = 79/171 (46%)
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH--TYKGHTRGVN 147
EA I+ L+GH S ++ F+P G ASGS D + +W + C + KGH +
Sbjct: 43 EAPIM-LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGD-CKNFMVLKGHKNAIL 100
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ-CIDFHPHEFLLATGSAD 206
+ +T DG +VS D TV+ WD+ GK + H + C L+ +GS D
Sbjct: 101 DLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDD 160
Query: 207 RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
T K WD+ I + P+ + ++F+ + G + +KV W+
Sbjct: 161 GTAKLWDMRQRGAIQTF-PDKYQITAVSFSDAADKIFTGGVDNDVKV--WD 208
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/149 (25%), Positives = 63/149 (42%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE-- 89
+ TGG D+ V +W + K A ++L GH I +S + + +WD+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPY 254
Query: 90 --EAKIVRTLTGHR----SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
+ + V+ GH+ N + + P G +GS D + IWD + I+ GHT
Sbjct: 255 APQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHT 314
Query: 144 RGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
VN F P + S D + L ++
Sbjct: 315 GSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 267 (99.0 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 69/236 (29%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P + F SG+ D K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G + +G +D T +L+DL A + L + HE I + F L
Sbjct: 226 ESDINAICFFPNGEAICTGSDDATCRLFDLRADQELIVYS-HESIICGITSVAFSRSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD E +G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 57/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I++++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D T K WD+ + S
Sbjct: 169 WDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G + G ++ ++F + H+++ G + ++ G+LL
Sbjct: 229 INAICFFPNGEAICTGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSR--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 287 AGYDDFNCNIW 297
Score = 149 (57.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + + G
Sbjct: 168 LWDIETGQQKTVFLGHTGDCMSLAVSPDFKLFISG 202
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 267 (99.0 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G + +G +D + +L+DL A + L + HE I + F L
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTY-AHESIICGITSVAFSLSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD E +G + V CL DG + G +S LK+++
Sbjct: 285 LFAGYDDFNCNVWDSMKCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 191 (72.3 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G + G + S ++F + H+++ G + ++ ++ G+LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIICGITSVA-FSL-SGRLLF 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 41/155 (26%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD R + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDFRLFISG 202
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 285 (105.4 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 63/230 (27%), Positives = 106/230 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S+ TG D + +W + L+L+GH + ++ + + + +K WD
Sbjct: 187 SNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD 246
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
LE+ K++R+ GH S + HP + +G D+ ++WDIR K I GH V
Sbjct: 247 LEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVC 306
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
++ P VV+G D T+K WDL GK + H+ ++ + HP E A+ SAD
Sbjct: 307 SVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN 366
Query: 208 TVKFWDLETFELIGSA-GPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
T KF L E + + + + + N DG + G + S+ + W+
Sbjct: 367 TKKF-SLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWK 415
Score = 266 (98.7 bits), Expect = 7.8e-20, P = 7.8e-20
Identities = 64/245 (26%), Positives = 113/245 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH----RSNCISVDFH 110
+ GH + SV+FD S G+A TIK+WD+ + TLTGH R +S + H
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVS-NRH 230
Query: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
+ F++G D +K WD+ + I +Y GH GV + P +++GG D+ ++W
Sbjct: 231 TY--MFSAGD-DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVW 287
Query: 171 DLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
D+ + H+ + + P + + TGS D T+KFWDL + + + V
Sbjct: 288 DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
Query: 231 RCLTFNPDGRTLLCGLHESLKVFSWEPIR-CHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
R +T +P ++ K FS CH+ + + ++ + V+E ++ +
Sbjct: 348 RAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNG 407
Query: 290 CVGVW 294
+ W
Sbjct: 408 SIWFW 412
Score = 229 (85.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 67/216 (31%), Positives = 102/216 (47%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V CL + + VL+TGG D +W I I +LSGH + + SV
Sbjct: 253 IRSYHGHLSGVYCLAL-HPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTR 311
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
++ V G+ TIK WDL K + TLT H+ + ++ HP FAS S D N K +
Sbjct: 312 PTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD-NTKKF 370
Query: 129 DIRKKGCIHTYKGHTRGV-NAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
+ K H + + NA+ DG +V+GG++ ++ WD +G H F+ E
Sbjct: 371 SLPKGEFCHNMLSQQKTIINAMAVNEDGV-MVTGGDNGSIWFWDWKSG---HSFQQSETI 426
Query: 188 IQCIDFHPHEFLLA-----TGS------ADRTVKFW 212
+Q + A TGS AD+T+K W
Sbjct: 427 VQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 213 (80.0 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 48/166 (28%), Positives = 76/166 (45%)
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
K R + GH SV F P E+F +GS D +KIWD+ T GH V +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
+ ++ S G+D VK WDL K++ + H + C+ HP +L TG D +
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRV 286
Query: 212 WDLET-FELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ T ++ +G + + T P ++ G H++ F W+
Sbjct: 287 WDIRTKMQIFALSGHDNTVCSVFT-RPTDPQVVTGSHDTTIKF-WD 330
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 289 (106.8 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 62/212 (29%), Positives = 106/212 (50%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNA-ILSLSGHTSGI 62
+R+Y L + HS V VL + D + LW+ K NA ++ GH +
Sbjct: 408 RRSYTL--LLGHSGPVYSATFSPPGDFVL-SSSADTTIRLWST-KLNANLVCYKGHNYPV 463
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
F A+ + T ++W ++ + +R + GH S+ V +HP + A+GS D
Sbjct: 464 WDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSD 523
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++WD++ C+ + GH V ++ +PDGR++ SG ED T+ +WDL+ + +
Sbjct: 524 KTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM 583
Query: 183 CHEGQIQCIDFHPHEFLLATGSADRTVKFWDL 214
H + + + LLA+GSAD TVK WD+
Sbjct: 584 GHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 258 (95.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 63/224 (28%), Positives = 103/224 (45%)
Query: 23 KIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGT 82
KIG+ S L + ++ G+ + L L GH+ + S +F V + +A T
Sbjct: 383 KIGQAGSGALQAENDSSDQSIGPNGRRSYTLLL-GHSGPVYSATFSPPGDFVLSSSADTT 441
Query: 83 IKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
I+LW + A +V GH F PFG +FAS S D +IW + + + G
Sbjct: 442 IRLWSTKLNANLV-CYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAG 500
Query: 142 HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLA 201
H V+ +++ P+ ++ +G D TV+LWD+ G+ + F H + + P +A
Sbjct: 501 HLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMA 560
Query: 202 TGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
+G D T+ WDL T I S V L+++ +G L G
Sbjct: 561 SGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASG 604
Score = 242 (90.2 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 45/141 (31%), Positives = 77/141 (54%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D +W++ + + ++GH S +D V + + +A G++ T++LWD++ + VR
Sbjct: 481 DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 540
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
GHRS +S+ P G + ASG D + +WD+ CI GH V ++ ++ +G
Sbjct: 541 IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSL 600
Query: 158 VVSGGEDNTVKLWDLTAGKLL 178
+ SG D TVKLWD+T+ L
Sbjct: 601 LASGSADCTVKLWDVTSSTKL 621
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 266 (98.7 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 72/264 (27%), Positives = 129/264 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIG---RKSSRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MT + + ++ AH + + G +++S +VTG D V +W L SL
Sbjct: 1 MTNQYSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDL+ K ++++ + ++ F P ++
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQY 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
A+G+ + I+ + + G Y TRG + +I ++PDG+++ SG D + ++D+
Sbjct: 121 LATGTHVGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 234 TFNPDGRTLLCGLHE-SLKVFSWE 256
F PD + + S+KV W+
Sbjct: 239 AFCPDDTHFVSSSSDKSVKV--WD 260
Score = 223 (83.6 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 43/142 (30%), Positives = 78/142 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + C+HT+ H V +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ +G +VS G+D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHVYD 302
Score = 218 (81.8 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 49/217 (22%), Positives = 102/217 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + LW + I S+ +++F +A G G + ++ +E K +L
Sbjct: 85 DAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 144
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
+S+ + P G++ ASG++D + I+DI +HT +GH + ++ F+PD +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+V+ +D +K++D+ L H + + F P + + S+D++VK WD+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 218 ELIGSAGPETSGVRCLTFNPDGRTLLC-GLHESLKVF 253
+ + V + +N +G ++ G + + V+
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 266 (98.7 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 68/236 (28%), Positives = 111/236 (47%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P + F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G + +G +D + +L+DL A + L + HE I + F L
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYS-HESIICGITSVAFSLSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD E +G + V CL DG + G +S LK+++
Sbjct: 285 LFAGYDDFNCNVWDSLKCERVGVLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 191 (72.3 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVFSWEPIR-----CHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G + G + S ++F + H+++ G + ++ ++ G+LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICGITSVA-FSL-SGRLLF 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISG 202
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 290 (107.1 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 62/211 (29%), Positives = 98/211 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH VN RF P+ +V +G D TV+LWD+
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T V L
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR 718
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ ++ + V+
Sbjct: 719 FSRDGEILASGSMDNT-VRLWDAVKAFEDVE 748
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/219 (26%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFS-PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 586
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ FHP + A+GS
Sbjct: 587 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGS 646
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 647 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGE 706
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H + + F +LA+GS D TV+ WD ++ FE
Sbjct: 707 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 745
Score = 271 (100.5 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 66/226 (29%), Positives = 106/226 (46%)
Query: 32 LVTGG-EDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L+ GG D V +W++ P + S+ + + + +S +VL ++ D +
Sbjct: 484 LIAGGFADSTVRVWSV-TPKKLRSVK-QAADLSLIDKESDDVLE---------RIMDEKT 532
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
A ++ L GH F P + S S D +++W ++ C+ YKGH V +
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P G + VSGG D +LW + L F H + C FHP+ +ATGSADRTV+
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ + + LTF+P+GR L G + +V W+
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 697
Score = 164 (62.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 44/185 (23%), Positives = 76/185 (41%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V L+A G A T+++W + K+ RS + D S
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-------RSVKQAADL----SLIDKES 520
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +I D + + GH+ V F+PD +++S ED TV+LW L L
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P+ + +G DR + W + ++ + + V C F+P+
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 241 TLLCG 245
+ G
Sbjct: 641 YVATG 645
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 288 (106.4 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
++ L++ ED LW++ A+++ GHT + V+F A + T +LW
Sbjct: 391 NKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSC 450
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
+ +R GH S+ V FHP + +GS D ++WD+ + + + GHT+ V A
Sbjct: 451 DHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTA 510
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ PDG + S + + LWD+ G+ + + H G I + F +L +G +D T
Sbjct: 511 VAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCT 570
Query: 209 VKFWDL 214
V+ WD+
Sbjct: 571 VRAWDV 576
Score = 243 (90.6 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 83/334 (24%), Positives = 138/334 (41%)
Query: 49 PNAILSLSGHTSG-IDSVSFDSSEVLVAAGAASGTIKLWDLEEAK--------------I 93
P+ + HT+ ++ F ++A G I+LW ++ K
Sbjct: 313 PSVCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGS 372
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
VR L+ H F P ++ S S D + ++W + K + YKGHT V + F P
Sbjct: 373 VRLLS-HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP 431
Query: 154 DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
G + + D T +LW L F H + C+ FHP+ + TGS+D+T + WD
Sbjct: 432 FGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWD 491
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSD 273
+ + T V + PDG T+ E L + W+ + G R+
Sbjct: 492 VHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL-IHLWD-------IGTG-RRIKT 542
Query: 274 LNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGS--VTRVNGLSESKSSASGNLSVLNE 331
+ H G + S+++ V +S T+ + V + N + SS +G SV+
Sbjct: 543 MRGHRGNIYSLSFSREST----VLVSGGSDCTVRAWDVFKTNYNNPVSSSLTG--SVVTP 596
Query: 332 NSAKAS-LGKLSVSQNSDPLVK-ETKSLGRLSVS 363
SAK S +++ S + D +V TK +VS
Sbjct: 597 FSAKTSTFNEVNWSTSPDQMVALYTKQTPIFNVS 630
Score = 188 (71.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 7 YKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVS 66
Y L+ F H S V+C+ S+ VL TG D LW + + +++ +GHT + +V+
Sbjct: 454 YPLRVFAGHLSDVDCVTFHPNSAYVL-TGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVA 512
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
+A+ + G I LWD+ + ++T+ GHR N S+ F SG D ++
Sbjct: 513 IAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVR 572
Query: 127 IWDIRK 132
WD+ K
Sbjct: 573 AWDVFK 578
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 265 (98.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
+E +H+ ++C + + R +VT D LW + I S H + SVS
Sbjct: 144 RELNSHTGYLSCCRF--LNDRQIVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSP 201
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ +GA T KLWDL K V+T TGH ++ +V + P G F +GS D + +++D
Sbjct: 202 DKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFD 261
Query: 130 IR--KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
IR ++ +T+ G+ ++ F+ GR++ +G +D T +WD G+ + H +
Sbjct: 262 IRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNR 321
Query: 188 IQCIDFHPHEFLLATGSADRTVKFW 212
+ C+ L TGS D +K W
Sbjct: 322 VSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 228 (85.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 60/206 (29%), Positives = 98/206 (47%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L+ HT + F + +V + + T LWD+E + + H + +SV P
Sbjct: 146 LNSHTGYLSCCRFLNDRQIVTS-SGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKN 204
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG+ D K+WD+R C+ T+ GH +NA+++ P+G +G +D + +L+D+ A
Sbjct: 205 YFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRA 264
Query: 175 GKLLHDFKCHEGQIQC----IDFH-PHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
+ L + H+ I C + F FL A G D T WD E + S +
Sbjct: 265 DRELMQYT-HDN-ILCGITSVGFSFSGRFLFA-GYDDFTCNVWDTLKGERVLSLTGHGNR 321
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFS 254
V CL DG L G +SL K+++
Sbjct: 322 VSCLGVPTDGMALCTGSWDSLLKIWA 347
Score = 192 (72.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 60/259 (23%), Positives = 107/259 (41%)
Query: 47 GKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS 106
GK +L GH + I ++ + V + + + G + +WD V + S ++
Sbjct: 50 GKIKVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMT 109
Query: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKG-----CIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ P F A G LD I+++R + C HT ++ RF D + V S
Sbjct: 110 CAYSPTANFVACGGLDNICSIYNLRSREQPIRVC-RELNSHTGYLSCCRFLNDRQIVTSS 168
Query: 162 GEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIG 221
G D T LWD+ G + +F H G + + P + +G+ D T K WDL + + +
Sbjct: 169 G-DMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQ 227
Query: 222 SAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIR-----CHDAVDVGWSRLSDLN 275
+ + + + + P+G + G + S ++F R HD + G + +
Sbjct: 228 TFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFS- 286
Query: 276 VHEGKLLGCSYNQSCVGVW 294
G+ L Y+ VW
Sbjct: 287 -FSGRFLFAGYDDFTCNVW 304
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 265 (98.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 59/186 (31%), Positives = 88/186 (47%)
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
S H + ++ +F L+ +G + LW AK++ +++GH F G
Sbjct: 19 SRHKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRL 78
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG 175
FAS S D +++ W C HT H R V + F+PDG+W++SGG DN +W + +G
Sbjct: 79 FASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSG 138
Query: 176 KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET--FELIGSAGPETSGVRCL 233
LL + K H +Q F +ATGS DR V+ W L E + G V CL
Sbjct: 139 ALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQG-HLGNVACL 197
Query: 234 TFNPDG 239
F+ G
Sbjct: 198 CFSVAG 203
Score = 223 (83.6 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 52/186 (27%), Positives = 84/186 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ F H + VNC ++L+T + K+ LW + S+SGHT + F
Sbjct: 15 IRYFSRHKAEVNCCAFS-PDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFS 73
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
S L A+ + +++ W K TLT HR + +V F P G++ SG D IW
Sbjct: 74 SDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIW 133
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL-LHDFKCHEGQ 187
I+ + KGH V + F+ D + V +G D V++W L + + H G
Sbjct: 134 SIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGN 193
Query: 188 IQCIDF 193
+ C+ F
Sbjct: 194 VACLCF 199
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 34/154 (22%), Positives = 63/154 (40%)
Query: 94 VRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+R + H++ NC + F P + + L +W + + GHT V F
Sbjct: 15 IRYFSRHKAEVNCCA--FSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVF 72
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
+ DGR S D +V+ W ++ K H H ++ + F P L +G D
Sbjct: 73 SSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALI 132
Query: 212 WDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
W +++ L+ + V+ F+ D +++ G
Sbjct: 133 WSIQSGALLEELKGHNAAVQSSVFSSDSQSVATG 166
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 265 (98.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 71/265 (26%), Positives = 117/265 (44%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T Y + HS V+ I + L + D + LW + GHT+ +
Sbjct: 50 TSYGYPKRSLKGHSHIVSDCVISSDGAYAL-SASWDKTLRLWELATGTTTRRFVGHTNDV 108
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRS--NCISVDFHPFGEFFASG 119
SVSF + + +G+ +IKLW+ L + K T GH +C+ +P S
Sbjct: 109 LSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSS 168
Query: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
D +K+W++ + GHT +N + +PDG SGG+D T LWDL K L+
Sbjct: 169 GWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLY 228
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV-------RC 232
++ +I + F P+ + L +A + F DLE + PE + V C
Sbjct: 229 SLNAND-EIHALVFSPNRYWLCAATASSIIIF-DLEKKSKVDELKPEFAAVGKKSREPEC 286
Query: 233 --LTFNPDGRTLLCGLHESLKVFSW 255
L ++ DG+TL G +++ + +W
Sbjct: 287 ISLAWSADGQTLFAGYTDNI-IRAW 310
Score = 262 (97.3 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 67/251 (26%), Positives = 112/251 (44%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAIL-----SLSGHTSGIDSVSFDS 69
H+ V L ++ +L++ D + +W + + SL GH+ + S
Sbjct: 14 HNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISS 73
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ + T++LW+L R GH ++ +SV F SGS D ++K+W+
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN 133
Query: 130 IRKKGCIHTY--KGHTRGVNAIRFTPDGR--WVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
C +T KGH+ V+ +RF+P+ + +VS G D VK+W+L++ KL D H
Sbjct: 134 TLGD-CKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHT 192
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
G I + P L A+G D T WDL + + S + L F+P+ L
Sbjct: 193 GYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDE-IHALVFSPNRYWLCAA 251
Query: 246 LHESLKVFSWE 256
S+ +F E
Sbjct: 252 TASSIIIFDLE 262
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 265 (98.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 76/276 (27%), Positives = 132/276 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKS---SRVLVTGGEDHKVNLWAIGKPNAIL--SL 55
M+T+ + ++ AH + + G+ S S ++++G D V +W + +L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWAL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV S ++A+ + I+LWDLE K +R++ + SV F P +
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQH 120
Query: 116 FASGSLDTNLKIWDIR--KKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWD 171
A+GS + I+ + KK Y TRG + +I ++PDG+++ SG D + ++D
Sbjct: 121 LATGSHVGKVNIFGVETGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
+ GKLLH + H I+ + F LL T S D +K +D++ L + S V
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVL 236
Query: 232 CLTFNPDGRTLLCGLHE-SLKVFSWEPIRC-HDAVD 265
+ F+PD + + S+KV+ C H +D
Sbjct: 237 NVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLD 272
Score = 229 (85.7 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 43/142 (30%), Positives = 79/142 (55%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F + L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + C+HT+ H V +
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ +G +VS G+D + ++D
Sbjct: 281 KYNRNGSKIVSVGDDQEIHVYD 302
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 289 (106.8 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 59/219 (26%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 526 MDEKTASELKILYGHSGPVYGASFS-PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 584
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ FHP + A+GS
Sbjct: 585 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGS 644
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 645 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGE 704
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H + + F +LA+GS D TV+ WD ++ FE
Sbjct: 705 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 743
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 62/211 (29%), Positives = 98/211 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH VN RF P+ +V +G D TV+LWD+
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 656
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T V L
Sbjct: 657 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR 716
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ I+ + ++
Sbjct: 717 FSRDGEILASGSMDNT-VRLWDAIKAFEDLE 746
Score = 274 (101.5 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 67/226 (29%), Positives = 106/226 (46%)
Query: 32 LVTGG-EDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L+ GG D V +W++ P + S+ S + + +S +VL ++ D +
Sbjct: 482 LIAGGFADSTVRVWSV-TPKKLRSVK-QASDLSLIDKESDDVLE---------RIMDEKT 530
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
A ++ L GH F P + S S D +++W ++ C+ YKGH V +
Sbjct: 531 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 590
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P G + VSGG D +LW + L F H + C FHP+ +ATGSADRTV+
Sbjct: 591 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 650
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ + + LTF+P+GR L G + +V W+
Sbjct: 651 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 695
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/185 (23%), Positives = 79/185 (42%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V L+A G A T+++W + K+ R++ S+ +D S
Sbjct: 470 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-RSVK-QASDLSLID---------KES 518
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +I D + + GH+ V F+PD +++S ED TV+LW L L
Sbjct: 519 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 578
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P+ + +G DR + W + ++ + + V C F+P+
Sbjct: 579 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 638
Query: 241 TLLCG 245
+ G
Sbjct: 639 YVATG 643
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 289 (106.8 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 59/219 (26%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFS-PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 586
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ FHP + A+GS
Sbjct: 587 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGS 646
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 647 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGE 706
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H + + F +LA+GS D TV+ WD ++ FE
Sbjct: 707 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFE 745
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 62/211 (29%), Positives = 98/211 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH VN RF P+ +V +G D TV+LWD+
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T V L
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR 718
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ I+ + ++
Sbjct: 719 FSRDGEILASGSMDNT-VRLWDAIKAFEDLE 748
Score = 274 (101.5 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 67/226 (29%), Positives = 106/226 (46%)
Query: 32 LVTGG-EDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L+ GG D V +W++ P + S+ S + + +S +VL ++ D +
Sbjct: 484 LIAGGFADSTVRVWSV-TPKKLRSVK-QASDLSLIDKESDDVLE---------RIMDEKT 532
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
A ++ L GH F P + S S D +++W ++ C+ YKGH V +
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P G + VSGG D +LW + L F H + C FHP+ +ATGSADRTV+
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ + + LTF+P+GR L G + +V W+
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 697
Score = 166 (63.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/185 (23%), Positives = 79/185 (42%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V L+A G A T+++W + K+ R++ S+ +D S
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-RSVK-QASDLSLID---------KES 520
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +I D + + GH+ V F+PD +++S ED TV+LW L L
Sbjct: 521 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 580
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P+ + +G DR + W + ++ + + V C F+P+
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 241 TLLCG 245
+ G
Sbjct: 641 YVATG 645
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 286 (105.7 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 53/186 (28%), Positives = 95/186 (51%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED + W +G N +L GH + + + A+ + T +LW +
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVL-YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDR 411
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH ++ V FHP + A+GS D +++W ++ + + GH V ++
Sbjct: 412 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLA 471
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L + + H I + F P L+A+ S D +V+
Sbjct: 472 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVR 531
Query: 211 FWDLET 216
WD+ +
Sbjct: 532 VWDIRS 537
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 64/230 (27%), Positives = 101/230 (43%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDL GH +D P
Sbjct: 334 LRGHCGPVYSTRFLADSSGLLSCSEDMS--IRYWDLGSFTNTVLYQGHAYPVWDLDISPH 391
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
+FAS S D ++W + + Y GH V+ ++F P+ ++ +G D TV+LW
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC 232
G + F H G + + F P+ LA+ D+ +K WDL + L T +
Sbjct: 452 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 511
Query: 233 LTFNPDGRTLL-CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKL 281
LTF+PD + + S++V+ C D S L + V+ G++
Sbjct: 512 LTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSEL--VGVYTGQM 559
Score = 249 (92.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 44/144 (30%), Positives = 73/144 (50%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S + D LW+ + + +GH + +D V F + +A G+ T++LW
Sbjct: 392 SLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ VR TGHR +S+ F P G++ AS D LK+WD+ +GHT + +
Sbjct: 452 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 511
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDL 172
+ F+PD V S DN+V++WD+
Sbjct: 512 LTFSPDSSLVASASMDNSVRVWDI 535
Score = 220 (82.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H + V+C+K +S L TG D V LW+ + N++ +GH + S
Sbjct: 411 RTYPLRIYAGHLADVDCVKF-HPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLS 469
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
++F + +A+ +KLWDL + + L GH N S+ F P AS S+D +
Sbjct: 470 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNS 529
Query: 125 LKIWDIRKKGC 135
+++WDIR C
Sbjct: 530 VRVWDIRSSHC 540
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFAS-GSLDT 123
VS DS L+AAG + IKLW L K+ H+ + + H +F D
Sbjct: 272 VSPDSK--LLAAGFDNSCIKLWSLRSKKLKSE--PHQVDVSRI--HLACDFLEEEDDEDD 325
Query: 124 NLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
NL +++ +GH V + RF D ++S ED +++ WDL + ++
Sbjct: 326 NLGT-EMK------VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQG 378
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLE-TFELIGSAGPETSGVRCLTFNPDGRTL 242
H + +D PH A+ S DRT + W + T+ L AG + V C+ F+P+ L
Sbjct: 379 HAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAG-HLADVDCVKFHPNSNYL 437
Query: 243 LCG 245
G
Sbjct: 438 ATG 440
Score = 131 (51.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 33/134 (24%), Positives = 58/134 (43%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG 61
+T++ ++ F H V L + + L + GED ++ LW + L GHT
Sbjct: 450 STQQGNSVRLFTGHRGPVLSLAFS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 508
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEA-----------KIVRTLTGHRSNCISVDFH 110
I S++F LVA+ + ++++WD+ + ++V TG SN +SV F
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFM 568
Query: 111 PFGEFFASGSLDTN 124
+G N
Sbjct: 569 ACNLLLVTGITQEN 582
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 288 (106.4 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 50/183 (27%), Positives = 92/183 (50%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L++ ED + LW++ ++ GH + F +G +LW +
Sbjct: 514 LLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHY 573
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
+ +R GH ++ FHP + A+GS D +++WD+ C+ + GH ++++ F
Sbjct: 574 QPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 633
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKF 211
+P+G+++ SG D V LWD+ G ++ + K H G I + F ++A+GS D TV+
Sbjct: 634 SPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRL 693
Query: 212 WDL 214
WD+
Sbjct: 694 WDV 696
Score = 287 (106.1 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 64/211 (30%), Positives = 97/211 (45%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + VSF + + + GTI+LW L+ + GH F PFG
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGY 554
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH V RF P+ +V +G D TV+LWD+
Sbjct: 555 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLN 614
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LA+GS D V WD+ +I T + L
Sbjct: 615 GNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALK 674
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG + G ++ V W+ +R D V+
Sbjct: 675 FSRDGEIIASGSIDNT-VRLWDVMRAIDDVE 704
Score = 199 (75.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ F H + V C + +S + TG D V LW + N + +GH I S++F
Sbjct: 576 LRIFAGHLADVTCTRF-HPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFS 634
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ +A+G+ G + LWD+ ++ L GH ++ F GE ASGS+D +++W
Sbjct: 635 PNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Query: 129 DIRK 132
D+ +
Sbjct: 695 DVMR 698
Score = 174 (66.3 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 43/185 (23%), Positives = 77/185 (41%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V F L+A G A T+++W + K+ + + N I + E
Sbjct: 428 GLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEK 487
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
+ KI +H GH+ V + F+PD +++S ED T++LW L L
Sbjct: 488 TSSESKI--------LH---GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVG 536
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P + +G DR + W + ++ + + V C F+P+
Sbjct: 537 YKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 241 TLLCG 245
+ G
Sbjct: 597 YVATG 601
Score = 122 (48.0 bits), Expect = 0.00097, P = 0.00097
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H ++ L + + L +G D +V LW IG I L GHT I ++ F
Sbjct: 621 FTGHKGPIHSLAFS-PNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDG 679
Query: 72 VLVAAGAASGTIKLWDLEEA 91
++A+G+ T++LWD+ A
Sbjct: 680 EIIASGSIDNTVRLWDVMRA 699
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 264 (98.0 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 69/236 (29%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G + +G +D + +L+DL A + L F HE I + F L
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELICFS-HESIICGITSVAFSLSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD E +G + V CL DG + G +S LK+++
Sbjct: 285 LFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 196 (74.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 59/251 (23%), Positives = 111/251 (44%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I++++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVFSW---EPIRC--HDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G + G + S ++F + + C H+++ G + ++ ++ G+LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELICFSHESIICGITSVA-FSL-SGRLLF 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISG 202
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 59/219 (26%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFS-PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 587
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ FHP + A+GS
Sbjct: 588 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGS 647
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 648 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGE 707
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H + + F +LA+GS D TV+ WD ++ FE
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Score = 287 (106.1 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 61/211 (28%), Positives = 98/211 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH VN RF P+ +V +G D TV+LWD+
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 659
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T V L
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR 719
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ ++ + ++
Sbjct: 720 FSRDGEILASGSMDNT-VRLWDAVKAFEDLE 749
Score = 271 (100.5 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 66/226 (29%), Positives = 106/226 (46%)
Query: 32 LVTGG-EDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L+ GG D V +W++ P + S+ + + + +S +VL ++ D +
Sbjct: 485 LIAGGFADSTVRVWSV-TPKKLRSVK-QAADLSLIDKESDDVLE---------RIMDEKT 533
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
A ++ L GH F P + S S D +++W ++ C+ YKGH V +
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 593
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P G + VSGG D +LW + L F H + C FHP+ +ATGSADRTV+
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 653
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ + + LTF+P+GR L G + +V W+
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 698
Score = 164 (62.8 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 44/185 (23%), Positives = 76/185 (41%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V L+A G A T+++W + K+ RS + D S
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-------RSVKQAADL----SLIDKES 521
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +I D + + GH+ V F+PD +++S ED TV+LW L L
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P+ + +G DR + W + ++ + + V C F+P+
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641
Query: 241 TLLCG 245
+ G
Sbjct: 642 YVATG 646
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 287 (106.1 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 68/233 (29%), Positives = 119/233 (51%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
+ + L +G DH + +W + K I +L GH + +V + + +G++ TIK+WD
Sbjct: 511 NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLF--SGSSDKTIKVWD 568
Query: 88 LEEAKIVRTLTGH----RSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
L+ + TL H ++ CIS G++ SGS D +K+WD++ C +T KGHT
Sbjct: 569 LKTLECKYTLESHARAVKTLCIS------GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHT 622
Query: 144 RGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATG 203
+ V I G + SG D T+++W+L + + + H+ ++ + + LL T
Sbjct: 623 KWVTTICIL--GTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC--DKLLFTA 678
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSW 255
S D T+K WDLET + + V+CL D + ++ C +S++V+ W
Sbjct: 679 SDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVWGW 731
Score = 272 (100.8 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 68/268 (25%), Positives = 134/268 (50%)
Query: 31 VLVTGGEDHKVNLWAIGKPN--AILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
+L TG D+ + ++ N + +L GH ++S+ ++ + +G++ +IK+WDL
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYNDQYLF--SGSSDHSIKVWDL 529
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ + + TL GH +V + ++ SGS D +K+WD++ C +T + H R V
Sbjct: 530 KKLRCIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKT 587
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRT 208
+ + G+++ SG D T+K+WDL + + K H + I L +GS D+T
Sbjct: 588 LCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKT 643
Query: 209 VKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGW 268
++ W+L++ E + V + D ++K++ E +RC+ ++
Sbjct: 644 IRVWNLKSLECSATLRGHDRWVEHMVIC-DKLLFTASDDNTIKIWDLETLRCNTTLEGHN 702
Query: 269 SRLSDLNVHEGK--LLGCSYNQSCVGVW 294
+ + L V E K ++ CS++QS + VW
Sbjct: 703 ATVQCLAVWEDKKCVISCSHDQS-IRVW 729
Score = 184 (69.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 54/245 (22%), Positives = 121/245 (49%)
Query: 53 LSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L+ + S S+ + E+L+ +I +LE K++ T+ G+ ++
Sbjct: 417 LNTNKERSKSKSIDLEKPEILIN-NKKKESI---NLETIKLIETIKGYH---VTSHLCIC 469
Query: 113 GEFFASGSLDTNLKIWDIRKKG--CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
+G D +++++D + + C+ T KGH V +I + + +++ SG D+++K+W
Sbjct: 470 DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVW 527
Query: 171 DLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
DL + + + H+ + + + ++L + GS+D+T+K WDL+T E + V
Sbjct: 528 DLKKLRCIFTLEGHDKPVHTVLLND-KYLFS-GSSDKTIKVWDLKTLECKYTLESHARAV 585
Query: 231 RCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQS 289
+ L + G+ L G ++ ++KV+ + RC+ + ++ + + L SY+++
Sbjct: 586 KTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKT 643
Query: 290 CVGVW 294
+ VW
Sbjct: 644 -IRVW 647
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 289 (106.8 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 59/163 (36%), Positives = 89/163 (54%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH++ + +V +A+G+ T++LWD + +TL GH +SV F P G
Sbjct: 698 TLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDG 749
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
ASGS D +++WD T +GH+ V ++ F+PDGR + SG D TV+LWD
Sbjct: 750 RLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPA 809
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET 216
G L + H ++ + F P LLA+GS D+TV+ WD T
Sbjct: 810 TGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT 852
Score = 269 (99.8 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 57/148 (38%), Positives = 82/148 (55%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
VL +G +D V LW + +L GH+ + SV+F L+A+G+ T++LWD
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 91 AKIVRTLTGHRSNCI-SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
+ +TL GH SN + SV F P G ASGS D +++WD T +GH+ V ++
Sbjct: 769 GSLQQTLRGH-SNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSV 827
Query: 150 RFTPDGRWVVSGGEDNTVKLWDLTAGKL 177
F+PDGR + SG D TV+LWD G L
Sbjct: 828 AFSPDGRLLASGSFDKTVRLWDPATGTL 855
Score = 251 (93.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 58/164 (35%), Positives = 86/164 (52%)
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
++TL GH ++ +V ASGS D +++WD T +GH+ V ++ F+P
Sbjct: 696 LQTLEGHSNSVWAV--------LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP 747
Query: 154 DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
DGR + SG D TV+LWD G L + H ++ + F P LLA+GS D+TV+ WD
Sbjct: 748 DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD 807
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEP 257
T L + + VR + F+PDGR L G + V W+P
Sbjct: 808 PATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKT-VRLWDP 850
Score = 182 (69.1 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
Q HS V + R+L +G D V LW + +L GH++ + SV+F
Sbjct: 731 QTLEGHSGWVLSVAFS-PDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSP 789
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
L+A+G+ T++LWD + +TL GH SV F P G ASGS D +++WD
Sbjct: 790 DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWV 158
G + V ++F+ DG ++
Sbjct: 850 -PATGTLQQTLIIKGTVTELQFSQDGSYI 877
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 263 (97.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 68/236 (28%), Positives = 110/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T GH + +S+ P F SG+ D + K+WDIR+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 78/289 (26%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + ++ S G+ + F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/251 (23%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I+ ++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 155 (59.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/155 (27%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSG 202
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 285 (105.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 66/245 (26%), Positives = 122/245 (49%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H+STV CLK+ K++ + +G D + +W + L GH + + ++ +V
Sbjct: 331 HTSTVRCLKMSDKNTAI--SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGD--IV 386
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+G+ T ++W + E + +R L+GH S ++ F G A+GSLDT+++IWD
Sbjct: 387 VSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD--GRRIATGSLDTSVRIWDPNTGQ 444
Query: 135 CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH 194
C +GHT V ++ + D +V+GG D +V++W LT +H H+ + + F
Sbjct: 445 CHAILQGHTSLVGQLQMSGDT--LVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFD 502
Query: 195 PHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGL--HESLKV 252
+ + +G +D VK W L T +L+ + V +TF + ++ ++V
Sbjct: 503 NNR--IVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEV 560
Query: 253 FSWEP 257
+S+ P
Sbjct: 561 WSFSP 565
Score = 242 (90.2 bits), Expect = 6.8e-17, P = 6.8e-17
Identities = 53/201 (26%), Positives = 98/201 (48%)
Query: 13 VAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV 72
V H ++V CL + ++V+G D +W+I + + +LSGH S I +++FD +
Sbjct: 370 VGHQASVRCLAV---HGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRI 426
Query: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
A G+ ++++WD + L GH S + G+ +G D ++++W + +
Sbjct: 427 --ATGSLDTSVRIWDPNTGQCHAILQGHTS--LVGQLQMSGDTLVTGGSDGSVRVWSLTR 482
Query: 133 KGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCID 192
IH H V +++F D +VSGG D VK+W L G+LL + + +
Sbjct: 483 MAPIHRLAAHDNSVTSLQF--DNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVT 540
Query: 193 FHPHEFLLATGSADRTV-KFW 212
F + ++ + + RTV + W
Sbjct: 541 FEEEKAVIMSSRSGRTVMEVW 561
Score = 216 (81.1 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 67/229 (29%), Positives = 109/229 (47%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS-VSFDSSEVLVAAGAASGTIKLWDL 88
+ +V ++ K++++ N +L GH G+ + V +D+ +LV+ G +++W++
Sbjct: 264 KYIVASLDNAKIHVYDTNGENQ-KTLEGHVMGVWAMVPWDN--ILVSGGC-DREVRVWNM 319
Query: 89 EEAKIVRTLTGHRSN--CISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
+ + L GH S C+ + SGS DT L+IWD+R C GH V
Sbjct: 320 ATGESIYLLRGHTSTVRCLKMSDKNTA---ISGSRDTTLRIWDLRTGTCRSVLVGHQASV 376
Query: 147 NAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSAD 206
+ G VVSG D T ++W ++ G+ L H QI I F +ATGS D
Sbjct: 377 RCLAV--HGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRR--IATGSLD 432
Query: 207 RTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFS 254
+V+ WD T + TS V L + D TL+ G + S++V+S
Sbjct: 433 TSVRIWDPNTGQCHAILQGHTSLVGQLQMSGD--TLVTGGSDGSVRVWS 479
Score = 46 (21.3 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 29/96 (30%), Positives = 41/96 (42%)
Query: 478 SLQSKATDSRKFQNSGDEVDQPAVSVLCENTGSKATEVSSVAD---RNTF----AAIKGS 530
S+ S D+ + + G + V V C TG E+S+ +D R TF A I S
Sbjct: 495 SVTSLQFDNNRIVSGGSD---GRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSS 551
Query: 531 IQGVSVTERNS----KEDI-FTVSGKSGTMSMSESP 561
G +V E S ED F + + S+SE P
Sbjct: 552 RSGRTVMEVWSFSPPPEDTEFDAATIGASSSISEPP 587
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 284 (105.0 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 83/253 (32%), Positives = 126/253 (49%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-AIG-KPNAILSLSGHTSGIDSVSFDS 69
F AH VN ++ SR+L TGG D +V LW A G K SLSG +GI S+ FDS
Sbjct: 318 FDAHDGEVNAVQFS-PGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDS 376
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ + A + ++W +++ ++ TLTGH +S F SGS D LK+WD
Sbjct: 377 AGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 436
Query: 130 IRKKGCIHT-YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+R K CI T + G + N I T + V+SG D ++ WD+ + ++ + + G+I
Sbjct: 437 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESVVREMELL-GKI 491
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC------LTFNPDGRTL 242
+D +P L + S D +K DL T + + G +C + F+PDG +
Sbjct: 492 TALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFS--APGFKCGSDWTRVVFSPDGSYV 549
Query: 243 LCGLHE-SLKVFS 254
G E SL V+S
Sbjct: 550 AAGSAEGSLYVWS 562
Score = 170 (64.9 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 50/194 (25%), Positives = 83/194 (42%)
Query: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH--TYKGHTRGVNAIRFTPDGRW 157
H +V F P A+G +D +K+W+ C + G G+ +I F G +
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAY 380
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+++ D ++W + +L H H G++ F + +GS DRT+K WDL +
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 218 ELIGS--AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD----VGWSRL 271
I + AG + + C + ++ G H K+ W+ IR V +G
Sbjct: 441 VCIKTVFAGSSCNDIVCTE-----QCVMSG-HFDKKIRFWD-IRSESVVREMELLGKITA 493
Query: 272 SDLNVHEGKLLGCS 285
DLN +LL CS
Sbjct: 494 LDLNPERTELLSCS 507
Score = 155 (59.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 47/214 (21%), Positives = 92/214 (42%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L+ D +W + +L+GH+ + S F + +G+ T+KLWDL
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
++T+ S+C D + SG D ++ WDIR + + + + + A+
Sbjct: 441 VCIKTVFAG-SSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESVVREMELLGK-ITALDL 496
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDF-----KCHEGQIQCIDFHPHEFLLATGSAD 206
P+ ++S D+ +K+ DL + F KC + + F P +A GSA+
Sbjct: 497 NPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVV-FSPDGSYVAAGSAE 555
Query: 207 RTVKFWDLETFELIGSAGPE-TSGVRCLTFNPDG 239
++ W + T ++ + +S + + + P G
Sbjct: 556 GSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSG 589
Score = 149 (57.5 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 53/213 (24%), Positives = 91/213 (42%)
Query: 7 YKLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
Y+L+ HS V K ++R+ V+G D + LW + I ++ +S D V
Sbjct: 398 YRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+E V +G I+ WD+ +VR + ++D +P S S D L
Sbjct: 457 C---TEQCVMSGHFDKKIRFWDIRSESVVREME-LLGKITALDLNPERTELLSCSRDDLL 512
Query: 126 KIWDIRKKGCIHTYK--GHTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
K+ D+R T+ G G + R F+PDG +V +G + ++ +W + GK+
Sbjct: 513 KVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVL 572
Query: 182 -KCHEGQIQCIDFHPHEF-LLATGSADRTVKFW 212
K H I + + P +++ R V W
Sbjct: 573 SKQHSSSINAVAWAPSGLHVVSVDKGSRAV-LW 604
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 261 (96.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 68/237 (28%), Positives = 111/237 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P + F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC----IDFHPHEF 198
+NAI F P+G + +G +D + +L+DL A + L + + I C + F
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYS--DESIICGITSVAFSLSGR 283
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
LL G D WD E +G + V CL DG + G +S LKV++
Sbjct: 284 LLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 50/205 (24%), Positives = 89/205 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVF 253
+ + F P+G + G + S ++F
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLF 253
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISG 202
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 261 (96.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 68/237 (28%), Positives = 111/237 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P + F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC----IDFHPHEF 198
+NAI F P+G + +G +D + +L+DL A + L + + I C + F
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYS--DESIICGITSVAFSLSGR 283
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
LL G D WD E +G + V CL DG + G +S LKV++
Sbjct: 284 LLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 50/205 (24%), Positives = 89/205 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVF 253
+ + F P+G + G + S ++F
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLF 253
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 40/155 (25%), Positives = 63/155 (40%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISG 202
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 285 (105.4 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 58/219 (26%), Positives = 103/219 (47%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
M K A +L+ HS V L++ ED V LW++ ++ GH
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFS-PDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 587
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ F +G +LW + + +R GH ++ +HP + A+GS
Sbjct: 588 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGS 647
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +++WD+ C+ + GH ++++ F+P+GR++ +G D V LWD+ G ++ +
Sbjct: 648 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGE 707
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD-LETFE 218
K H + + F +LA+GS D TV+ WD ++ FE
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 746
Score = 284 (105.0 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 60/211 (28%), Positives = 98/211 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ + SF + + + GT++LW L+ + GH F P+G
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+F SG D ++W + + GH VN R+ P+ +V +G D TV+LWD+
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G + F H+G I + F P+ LATG+ D V WD+ ++G T V L
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR 719
Query: 235 FNPDGRTLLCGLHESLKVFSWEPIRCHDAVD 265
F+ DG L G ++ V W+ ++ + ++
Sbjct: 720 FSRDGEILASGSMDNT-VRLWDAVKAFEDLE 749
Score = 271 (100.5 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 66/226 (29%), Positives = 106/226 (46%)
Query: 32 LVTGG-EDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L+ GG D V +W++ P + S+ S + + +S +VL ++ D +
Sbjct: 485 LIAGGFADSTVRVWSV-TPKKLRSVK-QASDLSLIDKESDDVLE---------RIMDEKT 533
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
A ++ L GH F P + S S D +++W ++ C+ YKGH V +
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 593
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P G + VSGG D +LW + L F H + C +HP+ +ATGSADRTV+
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVR 653
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
WD+ + + LTF+P+GR L G + +V W+
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG-RVLLWD 698
Score = 163 (62.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 43/185 (23%), Positives = 79/185 (42%)
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V L+A G A T+++W + K+ R++ S+ +D S
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-RSVK-QASDLSLID---------KES 521
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D +I D + + GH+ V F+PD +++S ED TV+LW L L
Sbjct: 522 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 581
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+K H + F P+ + +G DR + W + ++ + + V C ++P+
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN 641
Query: 241 TLLCG 245
+ G
Sbjct: 642 YVATG 646
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 282 (104.3 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 67/227 (29%), Positives = 106/227 (46%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI--GKPNAILSLSGHTS- 60
KR Y+L H + L K + LV+G D V LW + G+ IL HT
Sbjct: 378 KRVYRL--LTGHEQEIYSLDFS-KDGKTLVSGSGDRTVCLWDVEAGEQKLIL----HTDD 430
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
G+ +V F +AAG+ I++W +V L GH + SV F P G++ SGS
Sbjct: 431 GVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGS 489
Query: 121 LDTNLKIWDIR----------KKG--CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
LD +K+W+++ K+G C T+ GH + ++ +PDG+W++SG +D T++
Sbjct: 490 LDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQ 549
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
W + + H + + P+ ATGS D + W E
Sbjct: 550 FWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYE 596
Score = 271 (100.5 bits), Expect = 4.2e-20, P = 4.2e-20
Identities = 70/243 (28%), Positives = 120/243 (49%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L TG ED ++ +W I + L+GH I S+ F + +G+ T+ LWD+E
Sbjct: 359 KYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVE 418
Query: 90 EAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
+ + L H + ++ V F P G+F A+GSLD ++IW + GH V +
Sbjct: 419 AGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYS 475
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPH-EFLLA------ 201
+ F+PDG+++VSG DNT+KLW+L + EG I F H +F+L+
Sbjct: 476 VAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD 535
Query: 202 -----TGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSW 255
+GS DRT++FW ++ + + V + +P+G G + +++S+
Sbjct: 536 GKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSY 595
Query: 256 EPI 258
E +
Sbjct: 596 EDL 598
Score = 236 (88.1 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 62/210 (29%), Positives = 106/210 (50%)
Query: 58 HTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL---TGHRSNCI---SVDFHP 111
HTS I V F + +A G + ++++E K++ L + R + SV F P
Sbjct: 298 HTSVICYVRFSADGKFLATGCNRAAM-VFNVETGKLITLLQEESSKREGDLYVRSVAFSP 356
Query: 112 FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
G++ A+G D ++IWDI +K GH + + ++ F+ DG+ +VSG D TV LWD
Sbjct: 357 DGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
+ AG+ +G + + F P +A GS D+ ++ W + L+ V
Sbjct: 417 VEAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVY 474
Query: 232 CLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
+ F+PDG+ L+ G L ++K+ WE ++C
Sbjct: 475 SVAFSPDGKYLVSGSLDNTIKL--WE-LQC 501
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 282 (104.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 80/253 (31%), Positives = 126/253 (49%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNAIL-SLSGHTSGIDSVSFDS 69
F AH VN ++ SR+L TGG D +V LW + G+ SLSG +GI S+ FDS
Sbjct: 318 FDAHDGEVNAVQFS-PGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDS 376
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ + A + ++W +++ ++ TLTGH +S F SGS D LK+WD
Sbjct: 377 AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 436
Query: 130 IRKKGCIHT-YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+R K CI T + G + N I T + V+SG D ++ WD+ + ++ + + G+I
Sbjct: 437 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVREMELL-GKI 491
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC------LTFNPDGRTL 242
+D +P L + S D +K DL T + + G +C + F+PDG +
Sbjct: 492 TALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFS--APGFKCGSDWTRVVFSPDGSYV 549
Query: 243 LCGLHE-SLKVFS 254
G E SL ++S
Sbjct: 550 AAGSAEGSLYIWS 562
Score = 222 (83.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 58/206 (28%), Positives = 96/206 (46%)
Query: 51 AILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL--EEAKIVRTLTGHRSNCISVD 108
A+ H +++V F L+A G +KLW++ E+ + +L+G + S++
Sbjct: 314 ALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIE 373
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F G + + S D +IW + HT GH+ V + +F D +VSG D T+K
Sbjct: 374 FDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 433
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
LWDL + K+ K C D E + +G D+ ++FWD+ + ++ E
Sbjct: 434 LWDLRS-KVC--IKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREM--ELL 488
Query: 229 G-VRCLTFNPDGRTLL-CGLHESLKV 252
G + L NP+ LL C + LKV
Sbjct: 489 GKITALDLNPERTELLSCSRDDLLKV 514
Score = 175 (66.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 50/194 (25%), Positives = 85/194 (43%)
Query: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH--TYKGHTRGVNAIRFTPDGRW 157
H +V F P A+G +D +K+W++ + C + G G+ +I F G +
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSY 380
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+++ D ++W + +L H H G++ F + +GS DRT+K WDL +
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 218 ELIGS--AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD----VGWSRL 271
I + AG + + C + ++ G H K+ W+ IR V +G
Sbjct: 441 VCIKTVFAGSSCNDIVCTE-----QCVMSG-HFDKKIRFWD-IRSESIVREMELLGKITA 493
Query: 272 SDLNVHEGKLLGCS 285
DLN +LL CS
Sbjct: 494 LDLNPERTELLSCS 507
Score = 163 (62.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/230 (21%), Positives = 99/230 (43%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L+ D +W + +L+GH+ + S F + +G+ T+KLWDL
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
++T+ S+C D + SG D ++ WDIR + + + + + A+
Sbjct: 441 VCIKTVFAG-SSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGK-ITALDL 496
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDF-----KCHEGQIQCIDFHPHEFLLATGSAD 206
P+ ++S D+ +K+ DL + F KC + + F P +A GSA+
Sbjct: 497 NPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVV-FSPDGSYVAAGSAE 555
Query: 207 RTVKFWDLETFELIGSAGPE-TSGVRCLTFNPDGRTLLCGLHESLKVFSW 255
++ W + T ++ + +S + + ++P G ++ + + K W
Sbjct: 556 GSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVV-SVDKGCKAVLW 604
Score = 151 (58.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 51/195 (26%), Positives = 85/195 (43%)
Query: 7 YKLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
Y+L+ HS V K ++R+ V+G D + LW + I ++ +S D V
Sbjct: 398 YRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+E V +G I+ WD+ IVR + ++D +P S S D L
Sbjct: 457 C---TEQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLL 512
Query: 126 KIWDIRKKGCIHTYK--GHTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
K+ D+R T+ G G + R F+PDG +V +G + ++ +W + GK+
Sbjct: 513 KVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVL 572
Query: 182 -KCHEGQIQCIDFHP 195
K H I + + P
Sbjct: 573 SKQHSSSINAVAWSP 587
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 281 (104.0 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 82/272 (30%), Positives = 129/272 (47%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTG-GEDHKVNLWAIGKPNAILS-LSGHTSG---I 62
+L + H S V C++ R + L TG ++ +G+ A+L S SG I
Sbjct: 261 ELVHHLVHDSVVCCVRFSR-DGKYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYI 319
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
SV F +A GA I++WD+ I +GH + S+DF G + ASGS D
Sbjct: 320 RSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGD 379
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+++WDI + ++T GV + +PDG +V +G D TV++WD T G L+ +
Sbjct: 380 KTVRLWDIAEGKLVYTLSIED-GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLE 438
Query: 183 C---HEGQIQCIDFHPHEFLLATGSADRTVKFWDL----ETFELIGSAGP--ET-SGVR- 231
H+ + + F P+ L +GS D+T+K W+L + + G G T G +
Sbjct: 439 NPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKD 498
Query: 232 -----CLTFNPDGRTLLCGLHESLKVFSWEPI 258
CLT PDG ++ G + F W+PI
Sbjct: 499 FVLSVCLT--PDGHWVMSGSKDRGVQF-WDPI 527
Score = 273 (101.2 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 67/215 (31%), Positives = 103/215 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H + L + R + +G D V LW I + + +LS G+ +V+
Sbjct: 354 FSGHEQDIYSLDFAG-NGRYIASGSGDKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDG 411
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLT---GHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ VAAG+ T+++WD +V L GH+ + SV F P G+ SGSLD +K+W
Sbjct: 412 LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLW 471
Query: 129 DI---RK------KG--CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL 177
++ R+ KG C T++GH V ++ TPDG WV+SG +D V+ WD G
Sbjct: 472 ELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNA 531
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
+ H+ + + P L ATGS D + W
Sbjct: 532 QMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 189 (71.6 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 47/174 (27%), Positives = 91/174 (52%)
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI---RKKGCIHTYKGHTRG- 145
+ ++V L H S V F G++ A+G + + +I+D+ + + G
Sbjct: 259 DVELVHHLV-HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGD 316
Query: 146 --VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATG 203
+ ++ F+PDG+++ +G ED +++WD+ + H F HE I +DF + +A+G
Sbjct: 317 LYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASG 376
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
S D+TV+ WD+ +L+ + E GV + +PDG + G L ++++V W+
Sbjct: 377 SGDKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRV--WD 427
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/157 (26%), Positives = 65/157 (41%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLS---GHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
+ G D V +W + L GH + SV+F + + +G+ TIKLW+L
Sbjct: 414 VAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
Query: 89 -----------EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH 137
+ K RT GH+ +SV P G + SGS D ++ WD
Sbjct: 474 NLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQM 533
Query: 138 TYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
+GH V ++ +P G +G D ++W +A
Sbjct: 534 MLQGHKNSVISVAPSPTGNLFATGSGDMRARIWRYSA 570
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 281 (104.0 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 63/232 (27%), Positives = 108/232 (46%)
Query: 29 SRVLVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWD 87
S L++ ED + W + N +L GH + + + A+ + T +LW
Sbjct: 351 SSALLSCSEDTSIRYWDLESFTNTVL-YQGHAYPVWDLDISPHSLFFASASYDHTARLWS 409
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
+ +R GH + V FHP + A+GS D +++W ++ + + GH V
Sbjct: 410 FDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVR 469
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
+ F+P+G+++VS GED +KLWDL +G L D H I + F ++A+ S D
Sbjct: 470 CLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDN 529
Query: 208 TVKFWDLET-----------FELIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+V+ WD+++ EL+G + S V + F R L+ G+ E
Sbjct: 530 SVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLVTGIRE 581
Score = 267 (99.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 65/231 (28%), Positives = 108/231 (46%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDLE GH +D P
Sbjct: 335 LLGHCGPVYSTRFLPDSSALLSCSEDTS--IRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
FFAS S D ++W + + Y GH GV+ ++F P+ ++ +G D TV+LW
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSA 452
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPH-EFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
G + F H G ++C+ F P+ ++L++ G D+ +K WDL + L T +
Sbjct: 453 QQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGE-DQLLKLWDLASGTLYKDLHGHTDDIT 511
Query: 232 CLTFNPDGRTLL-CGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKL 281
+TF+ D + + S+++ W+ H++ S L V+ G++
Sbjct: 512 SVTFSLDSSVIASASMDNSVRI--WDIKSKHNSTPADGSSSELLGVYTGQM 560
Score = 210 (79.0 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 52/167 (31%), Positives = 78/167 (46%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
+ L GH S F P S S DT+++ WD+ Y+GH V + +P
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPH 392
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDL 214
+ S D+T +LW L + H + C+ FHP+ LATGS D+TV+ W
Sbjct: 393 SLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSA 452
Query: 215 ETFELI----GSAGPETSGVRCLTFNPDGRTLL-CGLHESLKVFSWE 256
+ + G GP VRCL F+P+G+ L+ G + LK+ W+
Sbjct: 453 QQGNSVRLFTGHCGP----VRCLAFSPNGQYLVSAGEDQLLKL--WD 493
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 43/130 (33%), Positives = 69/130 (53%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H + V+C+K +S L TG D V LW+ + N++ +GH +
Sbjct: 412 RTYPLRIYAGHLAGVDCVKF-HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRC 470
Query: 65 VSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
++F + + LV+AG +KLWDL + + L GH + SV F AS S+D
Sbjct: 471 LAFSPNGQYLVSAGEDQ-LLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDN 529
Query: 124 NLKIWDIRKK 133
+++IWDI+ K
Sbjct: 530 SVRIWDIKSK 539
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F H V CL + + LV+ GED + LW + L GHT I SV+F
Sbjct: 461 FTGHCGPVRCLAFS-PNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDS 519
Query: 72 VLVAAGAASGTIKLWDLEE-----------AKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
++A+ + ++++WD++ ++++ TG S ++V F +G
Sbjct: 520 SVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLVTGI 579
Query: 121 LDTN 124
+ N
Sbjct: 580 REEN 583
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 259 (96.2 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 67/236 (28%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L+GHT + F D ++++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + T GH + +S+ P F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NAI F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDNIICGITSVAFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 78/289 (26%), Positives = 127/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G +++L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
T+ GHT V ++ PD R VSG D + KLWD+ G F HE I
Sbjct: 172 ETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
I F P+ ATGS D T + +DL + ++ S G+ + F+ GR LL G ++
Sbjct: 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/251 (23%), Positives = 108/251 (43%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 42/155 (27%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ PD R + G
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSG 202
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 259 (96.2 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 72/264 (27%), Positives = 128/264 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCL--KIGRKSS-RVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MT + + ++ AH + + + +K + +VTG D V +W L SL
Sbjct: 1 MTNQYSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + ++ F P ++
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQY 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
A+G+ + I+ + + G Y TRG + +I ++PDG+++ SG D + ++D+
Sbjct: 121 LATGTHMGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 234 TFNPDGRTLLCGLHE-SLKVFSWE 256
F PD + + S+KV W+
Sbjct: 239 AFCPDDTHFVSSSSDKSVKV--WD 260
Score = 224 (83.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 44/142 (30%), Positives = 78/142 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + CIHT+ H V +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ +G +VS G+D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHVYD 302
Score = 216 (81.1 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 49/217 (22%), Positives = 102/217 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + LW + + S+ +++F +A G G + ++ +E K +L
Sbjct: 85 DAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSL 144
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
+S+ + P G++ ASG++D + I+DI +HT +GH + ++ F+PD +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+V+ +D +K++D+ L H + + F P + + S+D++VK WD+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 218 ELIGSAGPETSGVRCLTFNPDGRTLLC-GLHESLKVF 253
I + V + +N +G ++ G + + V+
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 276 (102.2 bits), Expect = 4.1e-21, P = 4.1e-21
Identities = 66/260 (25%), Positives = 117/260 (45%)
Query: 7 YKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+KL ++ H V L + ++ +G D + +W + L+L+GH S + +
Sbjct: 133 WKLMRVISGHLGWVRSLAV-EPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGL 191
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ + + +K WDLE K++R GH S ++ HP + +G D
Sbjct: 192 AVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVA 251
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
++WD+R + IH GHT V ++ V++G D TV+LWDL AGK + H+
Sbjct: 252 RVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHK 311
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
I+ + HP EF A+ S ++K W E + + + + L+ N D G
Sbjct: 312 KGIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIINTLSVNEDNVLFSGG 370
Query: 246 LHESLKVFSWEPIRCHDAVD 265
+ S+ + W+ + +D
Sbjct: 371 DNGSMSFWDWKTGYRYQTID 390
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 66/231 (28%), Positives = 101/231 (43%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ + H S V L + + +LVTGG D +W + + I LSGHT + V
Sbjct: 220 IRHYHGHLSGVYTLALHPRLD-LLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQ 278
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF-FASGSLDTNLKI 127
++ V G+ T++LWDL K + LT H+ S+ HP EF FAS S + +K
Sbjct: 279 EADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHP-REFTFASASTGS-IKQ 336
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH--DFKCHE 185
W + ++GH +N + D + SGG++ ++ WD G D
Sbjct: 337 WKCPGGEFMQNFEGHNAIINTLSVNEDNV-LFSGGDNGSMSFWDWKTGYRYQTIDTTAQP 395
Query: 186 GQIQC------IDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
G ++ F L TG AD+T+K W + A PET V
Sbjct: 396 GSLEAEAGIMTSTFDRTGLRLITGEADKTIKVWKQDD-----QATPETHPV 441
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 280 (103.6 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 59/193 (30%), Positives = 92/193 (47%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED V W + N +L GH + V + + + T +LW
Sbjct: 369 LLSCSEDSTVRYWDLKSFTNTVL-YRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFAR 427
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH S+ V FHP + A+GS D +++W R+ + + GH V +
Sbjct: 428 TYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLA 487
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L D + H I + F L+A+ S D TV+
Sbjct: 488 FSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVR 547
Query: 211 FWDLETFELIGSA 223
WD+ GSA
Sbjct: 548 VWDIRNAH--GSA 558
Score = 233 (87.1 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 55/212 (25%), Positives = 94/212 (44%)
Query: 52 ILSLSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
I +L GH+ + +F D+S +L + T++ WDL+ GH VD
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCS--EDSTVRYWDLKSFTNTVLYRGHAYPVWDVDV 404
Query: 110 HPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
P +F++ S D ++W + + Y GH V+ ++F P+ ++ +G D TV+L
Sbjct: 405 SPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRL 464
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
W G + F H G + + F P+ LA+ D+ +K WDL + L T
Sbjct: 465 WSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDT 524
Query: 230 VRCLTFNPDGRTLLCGLHESLKVFSWEPIRCH 261
+ L+F+ D +L+ V W+ H
Sbjct: 525 ISSLSFSQDS-SLVASASMDNTVRVWDIRNAH 555
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 46/168 (27%), Positives = 77/168 (45%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H S V+C+K +S + TG D V LW+ + ++ +GH + +
Sbjct: 427 RTYPLRLYAGHLSDVDCVKF-HPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLT 485
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
++F + +A+ +KLWDL + + L GH S+ F AS S+D
Sbjct: 486 LAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNT 545
Query: 125 LKIWDIRKK-------GC----IHTYKGHTRGVNAIRFTPDGRWVVSG 161
+++WDIR GC I Y G T + ++F +V+G
Sbjct: 546 VRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNILNVQFMACNLLLVTG 593
Score = 191 (72.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 66/252 (26%), Positives = 103/252 (40%)
Query: 12 FVAHSSTVNCLKIGRKS--SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
F A T L S SR+L G ++ V LW++ L H + D
Sbjct: 273 FYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARK--LKAGPHKA-------DV 323
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
S++ +A D ++I +TL GH F S S D+ ++ WD
Sbjct: 324 SKIRLACDVLEEEADDEDASGSEI-KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWD 382
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQ 189
++ Y+GH V + +P + + D T +LW L + H +
Sbjct: 383 LKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVD 442
Query: 190 CIDFHPHEFLLATGSADRTVKFWDLE---TFELI-GSAGPETSGVRCLTFNPDGRTLL-C 244
C+ FHP+ +ATGS D+TV+ W + L G GP V L F+P+G+ L
Sbjct: 443 CVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGP----VLTLAFSPNGKYLASA 498
Query: 245 GLHESLKVFSWE 256
G + LK+ W+
Sbjct: 499 GEDQRLKL--WD 508
>UNIPROTKB|I3L988 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0014909 "smooth muscle cell migration" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00690000102167 GO:GO:0014909
Ensembl:ENSSSCT00000031355 OMA:FAGHEAS Uniprot:I3L988
Length = 411
Score = 273 (101.2 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 64/225 (28%), Positives = 105/225 (46%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + +GH + F
Sbjct: 79 FALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDS 138
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFH--PFGE----FFASGSLDTNL 125
LVA G SG +K+W ++ + V + S ++ P+G +G+ D N
Sbjct: 139 TLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEVRSSEWDSAPWGRGRGPVXLAGTADGNT 198
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKC-- 183
+W + C T++G R PDG+ V G ED T+++WDL G ++ K
Sbjct: 199 WMWKVPNGDC-KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNAIYVLKGTE 257
Query: 184 -HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET 227
H+G + C+ + L+ TGS D K T +++G PET
Sbjct: 258 GHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFRPET 302
Score = 129 (50.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 46/213 (21%), Positives = 86/213 (40%)
Query: 47 GKPNAILSLSGHTSGIDSVSFD-SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI 105
G ++ ++ + H++ + VS D + L G +W L + +++ GH+ +
Sbjct: 71 GPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVT 130
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF--TPDGRW----VV 159
F A+G + LK+W + K + +++ V + + P GR +
Sbjct: 131 CAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEVRSSEWDSAPWGRGRGPVXL 190
Query: 160 SGGEDNTVKLWDLTAGKLLHDFKCHEGQ---IQCIDFHPHEFLLATGSADRTVKFWDLET 216
+G D +W + G D K +G C P G D T++ WDL+
Sbjct: 191 AGTADGNTWMWKVPNG----DCKTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQ 246
Query: 217 ----FELIGSAGPETSGVRCLTFNPDGRTLLCG 245
+ L G+ G + + C+ N DG +L G
Sbjct: 247 GNAIYVLKGTEGHQ-GPLTCVATNQDGSLILTG 278
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 280 (103.6 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 83/254 (32%), Positives = 127/254 (50%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-G-KPNAILSLSGHTSGIDSVSFDS 69
F AH VN ++ SR+L TGG D +V LW + G K SLSG +GI S+ FDS
Sbjct: 318 FDAHDGEVNAVQFS-PGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 376
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ + A + ++W +++ ++ TLTGH +S F SGS D LK+WD
Sbjct: 377 AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 436
Query: 130 IRKKGCIHT-YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+R K CI T + G + N I T + V+SG D ++ WD+ + ++ + + G+I
Sbjct: 437 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVREMELL-GKI 491
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDL------ETFELIG-SAGPETSGVRCLTFNPDGRT 241
+D +P L + S D +K DL +TF G G + + V F+PDG
Sbjct: 492 TALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRV---VFSPDGGY 548
Query: 242 LLCGLHE-SLKVFS 254
+ G E SL ++S
Sbjct: 549 VAAGSAEGSLYIWS 562
Score = 217 (81.4 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 51 AILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL--EEAKIVRTLTGHRSNCISVD 108
A+ H +++V F L+A G +KLW++ ++ + +L+G + S++
Sbjct: 314 AMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIE 373
Query: 109 FHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
F G + + S D +IW + HT GH+ V + +F D +VSG D T+K
Sbjct: 374 FDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLK 433
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS 228
LWDL + K+ K C D E + +G D+ ++FWD+ + ++ E
Sbjct: 434 LWDLRS-KVC--IKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREM--ELL 488
Query: 229 G-VRCLTFNPDGRTLL-CGLHESLKV 252
G + L NP+ LL C + LK+
Sbjct: 489 GKITALDLNPERTELLSCSRDDLLKI 514
Score = 173 (66.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 50/194 (25%), Positives = 84/194 (43%)
Query: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH--TYKGHTRGVNAIRFTPDGRW 157
H +V F P A+G +D +K+W++ C + G G+ +I F G +
Sbjct: 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSY 380
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+++ D ++W + +L H H G++ F + +GS DRT+K WDL +
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 218 ELIGS--AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD----VGWSRL 271
I + AG + + C + ++ G H K+ W+ IR V +G
Sbjct: 441 VCIKTVFAGSSCNDIVCTE-----QCVMSG-HFDKKIRFWD-IRSESIVREMELLGKITA 493
Query: 272 SDLNVHEGKLLGCS 285
DLN +LL CS
Sbjct: 494 LDLNPERTELLSCS 507
Score = 153 (58.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 48/230 (20%), Positives = 98/230 (42%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L+ D +W + +L+GH+ + S F + +G+ T+KLWDL
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 440
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
++T+ S+C D + SG D ++ WDIR + + + + + A+
Sbjct: 441 VCIKTVFAG-SSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGK-ITALDL 496
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDF-----KCHEGQIQCIDFHPHEFLLATGSAD 206
P+ ++S D+ +K+ DL + F KC + + F P +A GSA+
Sbjct: 497 NPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVV-FSPDGGYVAAGSAE 555
Query: 207 RTVKFWDLETFELIGSAGPET-SGVRCLTFNPDGRTLLCGLHESLKVFSW 255
++ W + + ++ + S + + ++P G ++ + + K W
Sbjct: 556 GSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVV-SVDKGSKAVLW 604
Score = 148 (57.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 7 YKLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
Y+L+ HS V K ++R+ V+G D + LW + I ++ +S D V
Sbjct: 398 YRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+E V +G I+ WD+ IVR + ++D +P S S D L
Sbjct: 457 C---TEQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLL 512
Query: 126 KIWDIRKKGCIHTYK--GHTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
KI D+R T+ G G + R F+PDG +V +G + ++ +W + +GK+
Sbjct: 513 KIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVL 572
Query: 182 -KCHEGQIQCIDFHP 195
K H I + + P
Sbjct: 573 SKQHGSSINAVAWSP 587
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 258 (95.9 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 71/266 (26%), Positives = 116/266 (43%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T Y + HS ++ + + + L +G D + LW + GHT +
Sbjct: 51 TNYGYPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDQTLRLWDLAAGKTTRRFEGHTKDV 109
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWD-LEEAKIVRTLTGHRSNCISVDFHP--FGEFFASG 119
SV+F + + +G+ TIKLW+ L E K GH V F P S
Sbjct: 110 LSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSC 169
Query: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
D +K+W++ + + GH +N + +PDG SGG+D+ LWDL GK L+
Sbjct: 170 GWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLY 229
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE----TSGV---RC 232
+ H I + F P+ + L ++K WDL + + PE TS +C
Sbjct: 230 TLE-HNDIINALCFSPNRYWLCVAYGP-SIKIWDLACKKTVEELRPEVVSPTSKADQPQC 287
Query: 233 LT--FNPDGRTLLCGLHESLKVFSWE 256
L+ ++ DG+TL G ++ + W+
Sbjct: 288 LSLAWSTDGQTLFAGYSDNT-IRVWQ 312
Score = 242 (90.2 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 75/263 (28%), Positives = 121/263 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH+ I V S +G+ T++LWDL K R GH + +SV F
Sbjct: 60 LYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNR 119
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNAIRFTPD--GRWVVSGGEDNTVKLW 170
SGS D +K+W+ + C T + GHT V+ +RF+P+ +VS G D TVK+W
Sbjct: 120 QIVSGSRDKTIKLWNTLAE-CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVW 178
Query: 171 DLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
+L KL ++ H G + + P L +G D WDL + + + +
Sbjct: 179 NLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTL-EHNDII 237
Query: 231 RCLTFNPDGRTLLCGLH-ESLKVFSWEPIRCHDAVD------VGWSRLSD----LNVH-- 277
L F+P+ R LC + S+K+ W+ + C V+ V + +D L++
Sbjct: 238 NALCFSPN-RYWLCVAYGPSIKI--WD-LACKKTVEELRPEVVSPTSKADQPQCLSLAWS 293
Query: 278 -EGKLLGCSYNQSCVGVWVVDIS 299
+G+ L Y+ + + VW V +S
Sbjct: 294 TDGQTLFAGYSDNTIRVWQVSVS 316
Score = 215 (80.7 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 59/214 (27%), Positives = 100/214 (46%)
Query: 54 SLSGHTSGIDSVSFDSSEV-LVAAGAASGTIKLWDL---EEAKI---VRTLTGHRSNCIS 106
+L GH + ++ + + + + + T+ +W L E+ + L GH S+ IS
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGH-SHFIS 68
Query: 107 -VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
V G + SGS D L++WD+ ++GHT+ V ++ F+ D R +VSG D
Sbjct: 69 DVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDK 128
Query: 166 TVKLWDLTAG-KLLHDFKCHEGQIQCIDFHPHEF--LLATGSADRTVKFWDLETFELIGS 222
T+KLW+ A K H + C+ F P+ ++ + DRTVK W+L +L +
Sbjct: 129 TIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNN 188
Query: 223 AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+ +T +PDG G +S K W+
Sbjct: 189 HHGHNGYLNTVTVSPDGSLCTSGGKDS-KALLWD 221
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/177 (22%), Positives = 81/177 (45%)
Query: 7 YKLQEFVAHSSTVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
+ +QE H+ V+C++ S+ ++V+ G D V +W + + GH +++V
Sbjct: 141 FTIQED-GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTV 199
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L +G LWDL + K + TL H ++ F P ++ + ++
Sbjct: 200 TVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSP-NRYWLCVAYGPSI 257
Query: 126 KIWDIRKKGCIH---------TYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
KIWD+ K + T K ++ ++ DG+ + +G DNT+++W ++
Sbjct: 258 KIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 283 (104.7 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 60/221 (27%), Positives = 107/221 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI----GKPNAILSLS 56
+++ R + + + HS+ V + R + +V+G +D V +W + G ++ +
Sbjct: 417 VSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKA 476
Query: 57 -----GHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHP 111
H ++SV ++ L+A+G+ T KLW L + +++ GHR SV F P
Sbjct: 477 RSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSP 536
Query: 112 FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
+ S S D +++IW I+ C+ T++GH V I F G +VS G D VKLW
Sbjct: 537 VDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWT 596
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
+ + + H+ ++ + + L+ TGSAD T+ W
Sbjct: 597 IKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 225 (84.3 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSFDS- 69
H+ T+ + + RK S + T +D V +W + G+ + + +GH++ + S++
Sbjct: 385 HTDTILSIDVFRKGS-MFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRM 443
Query: 70 SEVLVAAGAASGTIKLWDLEEA---------KIVRTLTGHRSNCISVDFHPFGEFFASGS 120
+ V +G+ T+K+WDL E K T H + SV P + ASGS
Sbjct: 444 KQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGS 503
Query: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
D K+W + + +GH RGV +++F+P + + S D +V++W + L
Sbjct: 504 QDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKT 563
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
F+ H+ + I F L + +D VK W ++T E +
Sbjct: 564 FEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECV 603
Score = 224 (83.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/282 (25%), Positives = 124/282 (43%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGTIKLWDLEE 90
L+T +H + L+ G+ + V F + +A S +K+++L
Sbjct: 317 LITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELS- 375
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW--DIR--KKGCIHTYKGHTRGV 146
+ L GH +S+D G FA+ + D ++++W D+ + C+ GH+ V
Sbjct: 376 TNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAV 435
Query: 147 NAIRFTP-DGRWVVSGGEDNTVKLWDL--TAG-------KLLHDFKCHEGQIQCIDFHPH 196
+I + ++VVSG +D TVK+WDL T G K + HE + + P+
Sbjct: 436 GSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPN 495
Query: 197 EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTL-LCGLHESLKVFSW 255
+ LLA+GS DRT K W L L+G GV + F+P + L S++++S
Sbjct: 496 DKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSI 555
Query: 256 EPIRCHDAVDV-GWSRLSDLNVHEGKLLGCSYNQSCVGVWVV 296
+ C + S L + V G L S + V +W +
Sbjct: 556 QDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTI 597
Score = 217 (81.4 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 58/185 (31%), Positives = 90/185 (48%)
Query: 58 HTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG---E 114
H+ + S+SFD + L+A G GTIKLWD+ + L G V+FHP +
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
F+S S D ++IWD+R C+ + H V A+ F+PDG +VS G D +WDL
Sbjct: 165 LFSSSS-DCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQE 223
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELI--GSAGP----ETS 228
K+ +E ++ + +L +GSAD + + L+ GS G ++S
Sbjct: 224 QKVKRTIPVYEA-VEGV-------VLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSS 275
Query: 229 GVRCL 233
RC+
Sbjct: 276 SSRCV 280
Score = 185 (70.2 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 58 HTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISV-DFHPFGEFF 116
+ G VS D + G I + + KI+ ++ I+ P E
Sbjct: 22 YKGGKVQVSGDEQHIFCTYGPK---INILQISTGKIIHSIEQEDQEDITAFALSPDDEML 78
Query: 117 ASGSLDTNLKIWDIRKKGCIHTYKG-HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG 175
S S L+ WD +++ C +++ H+ V ++ F + +GG D T+KLWD+
Sbjct: 79 VSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQ 138
Query: 176 KLLHDFKCHEGQIQCIDFHPH--EFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
H+ K G + ++FHP L + S+D ++ WDL + + S V L
Sbjct: 139 YCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTAL 198
Query: 234 TFNPDGRTLL 243
F+PDG TL+
Sbjct: 199 AFSPDGHTLV 208
Score = 139 (54.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/163 (24%), Positives = 73/163 (44%)
Query: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF--DSSEVLVAAGAASGTIKL 85
+S +L TGG D + LW + K +L G + + V F D S + + + ++ I++
Sbjct: 117 TSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRI 176
Query: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK---KGCIHTYKGH 142
WDL ++ V L H S ++ F P G S D +WD+++ K I Y+
Sbjct: 177 WDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEA- 235
Query: 143 TRGV---------NAIRFTPDGRWVVSGGEDNTVKLWDLTAGK 176
GV + + D +V+ G +++WD ++ +
Sbjct: 236 VEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSR 278
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 278 (102.9 bits), Expect = 4.8e-21, P = 4.8e-21
Identities = 65/235 (27%), Positives = 116/235 (49%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
AH V + I + +VTG + + W N ++ + H + +SF +++
Sbjct: 5 AHDQAVRSM-IWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDLK 63
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
+ + T+K+WD + R+LTGH + SVD+HP SG D +K+WD +
Sbjct: 64 FCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKSG 123
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
+ ++ GH V +++ +G WV++ +D +KL+D+ + K L F+ H + + +
Sbjct: 124 RELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAW 183
Query: 194 HP-HEFLLATGSADRTVKFWDL--ETFEL-IGSAGPETSGVRCLTFNPDGRTLLC 244
HP HE +GS D + W + ET ++ I +A + V L ++P G LLC
Sbjct: 184 HPFHEEYFVSGSYDGAIFHWLVGHETPQIEINNA--HDNSVWDLAWHPVGY-LLC 235
Score = 222 (83.2 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 53/202 (26%), Positives = 93/202 (46%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L H + S+ + ++E + G G IK W + T HR + + F
Sbjct: 3 LQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVKVNKTAHRESVRDLSFCRTDL 62
Query: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTA 174
F S S DT +K+WD + + GH V ++ + P +VSGG+D VKLWD +
Sbjct: 63 KFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDAKS 122
Query: 175 GKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLT 234
G+ L F H+ +QC+ ++ + + T S D+ +K +D+ + + + S V L
Sbjct: 123 GRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALA 182
Query: 235 FNP-DGRTLLCGLHESLKVFSW 255
++P + G ++ +F W
Sbjct: 183 WHPFHEEYFVSGSYDGA-IFHW 203
Score = 214 (80.4 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 51/202 (25%), Positives = 96/202 (47%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
AH +V L R + + +D V +W + SL+GH + SV + ++ L
Sbjct: 47 AHRESVRDLSFCRTDLK-FCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSL 105
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
+ +G +KLWD + + +R+ GH++ V ++ G + + S D +K++DIR
Sbjct: 106 LVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSM 165
Query: 134 GCIHTYKGHTRGVNAIRFTP-DGRWVVSGGEDNTVKLWDLTAGKL--LHDFKCHEGQIQC 190
+ +++GH + V A+ + P + VSG D + W L + + H+ +
Sbjct: 166 KELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHW-LVGHETPQIEINNAHDNSVWD 224
Query: 191 IDFHPHEFLLATGSADRTVKFW 212
+ +HP +LL +G D +FW
Sbjct: 225 LAWHPVGYLLCSGGNDHATRFW 246
Score = 189 (71.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 50/169 (29%), Positives = 80/169 (47%)
Query: 31 VLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
+LV+GG+D+ V LW + S GH + + V ++ + V + IKL+D+
Sbjct: 105 LLVSGGKDYLVKLWDAKSGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRS 164
Query: 91 AKIVRTLTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDI-RKKGCIHTYKGHTRGVNA 148
K + + GH + ++ +HPF E +F SGS D + W + + I H V
Sbjct: 165 MKELESFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHETPQIEINNAHDNSVWD 224
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDLTA-GKLLHDFKCHEGQIQCI-DFHP 195
+ + P G + SGG D+ + W G L D K + GQ+Q D HP
Sbjct: 225 LAWHPVGYLLCSGGNDHATRFWCRNRPGDLTRD-KYNSGQMQGYGDQHP 272
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 244 (91.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 75/289 (25%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ GH+ V ++ PDGR VSG D ++KLWD+ F HE I
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P+ + TGS D T + +DL + L+ S G+ + F+ GR LL G ++
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D T L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D ++K WD+ + S
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 287 AGYDDFNCNIW 297
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCA 167
Query: 211 FWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 268
WD+ET + +G AG + V L+ PDGRT + G + S+K++ C +G
Sbjct: 168 LWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF-IGH 225
Query: 269 SRLSDLN 275
SD+N
Sbjct: 226 E--SDIN 230
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 220 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 277
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 335
Query: 125 LKIWD 129
LKIW+
Sbjct: 336 LKIWN 340
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 244 (91.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 75/289 (25%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ GH+ V ++ PDGR VSG D ++KLWD+ F HE I
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P+ + TGS D T + +DL + L+ S G+ + F+ GR LL G ++
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D T L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D ++K WD+ + S
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 287 AGYDDFNCNIW 297
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCA 167
Query: 211 FWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 268
WD+ET + +G AG + V L+ PDGRT + G + S+K++ C +G
Sbjct: 168 LWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF-IGH 225
Query: 269 SRLSDLN 275
SD+N
Sbjct: 226 E--SDIN 230
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 220 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 277
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 335
Query: 125 LKIWD 129
LKIW+
Sbjct: 336 LKIWN 340
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 64 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 121
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 122 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 181
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 182 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 240
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 241 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 244 (91.0 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 75/289 (25%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 10 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 68
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 69 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 127
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ GH+ V ++ PDGR VSG D ++KLWD+ F HE I
Sbjct: 128 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 187
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P+ + TGS D T + +DL + L+ S G+ + F+ GR LL G ++
Sbjct: 188 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAG-YD 246
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 247 DFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 197 (74.4 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 56/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 6 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 65
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D T L
Sbjct: 66 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 124
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D ++K WD+ + S
Sbjct: 125 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 184
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 185 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--SGRLLL 242
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 243 AGYDDFNCNIW 253
Score = 179 (68.1 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 5 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 64
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 65 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCA 123
Query: 211 FWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 268
WD+ET + +G AG + V L+ PDGRT + G + S+K++ C +G
Sbjct: 124 LWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF-IGH 181
Query: 269 SRLSDLN 275
SD+N
Sbjct: 182 E--SDIN 186
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 176 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 233
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 234 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 291
Query: 125 LKIWD 129
LKIW+
Sbjct: 292 LKIWN 296
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 244 (91.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 75/289 (25%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ GH+ V ++ PDGR VSG D ++KLWD+ F HE I
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P+ + TGS D T + +DL + L+ S G+ + F+ GR LL G ++
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D T L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D ++K WD+ + S
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 287 AGYDDFNCNIW 297
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCA 167
Query: 211 FWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 268
WD+ET + +G AG + V L+ PDGRT + G + S+K++ C +G
Sbjct: 168 LWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF-IGH 225
Query: 269 SRLSDLN 275
SD+N
Sbjct: 226 E--SDIN 230
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 220 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 277
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 335
Query: 125 LKIWD 129
LKIW+
Sbjct: 336 LKIWN 340
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 244 (91.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 75/289 (25%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ GH+ V ++ PDGR VSG D ++KLWD+ F HE I
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P+ + TGS D T + +DL + L+ S G+ + F+ GR LL G ++
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D T L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D ++K WD+ + S
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 287 AGYDDFNCNIW 297
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCA 167
Query: 211 FWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 268
WD+ET + +G AG + V L+ PDGRT + G + S+K++ C +G
Sbjct: 168 LWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF-IGH 225
Query: 269 SRLSDLN 275
SD+N
Sbjct: 226 E--SDIN 230
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 220 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 277
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 335
Query: 125 LKIWD 129
LKIW+
Sbjct: 336 LKIWN 340
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 108 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 285 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 244 (91.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 75/289 (25%), Positives = 126/289 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
H + + + G SR+LV+ +D K+ +W N + ++ +S + + ++ S V
Sbjct: 54 HLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFV 112
Query: 75 AAGAASGTIKLWDLE----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
A G ++ L+ ++ R L GH F + S DT +WDI
Sbjct: 113 ACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDI 171
Query: 131 RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC 190
+ GH+ V ++ PDGR VSG D ++KLWD+ F HE I
Sbjct: 172 ETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINA 231
Query: 191 IDFHPHEFLLATGSADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHE 248
+ F P+ + TGS D T + +DL + L+ S G+ + F+ GR LL G ++
Sbjct: 232 VAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAG-YD 290
Query: 249 SLKVFSWEPIRCHDA-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
W+ ++ A V G +R+S L V +G + S + +W
Sbjct: 291 DFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/251 (22%), Positives = 107/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D T L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D ++K WD+ + S
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ +W
Sbjct: 287 AGYDDFNCNIW 297
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 53/187 (28%), Positives = 81/187 (43%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQII-TSSGDTTCA 167
Query: 211 FWDLETFE-LIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGW 268
WD+ET + +G AG + V L+ PDGRT + G + S+K++ C +G
Sbjct: 168 LWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTF-IGH 225
Query: 269 SRLSDLN 275
SD+N
Sbjct: 226 E--SDIN 230
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 220 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 277
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 278 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 335
Query: 125 LKIWD 129
LKIW+
Sbjct: 336 LKIWN 340
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 66/236 (27%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 8 SGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT--T 65
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH + +S+ P G F SG+ D ++K+WD+R C T+ GH
Sbjct: 66 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 125
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 126 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRL 184
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S LK+++
Sbjct: 185 LLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 162 (62.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 46/196 (23%), Positives = 83/196 (42%)
Query: 109 FHPFGEFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGED 164
+ P G F A G LD I+ ++ ++G + + GHT ++ RF D + + S G D
Sbjct: 5 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-D 63
Query: 165 NTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAG 224
T LWD+ G+ F H G + + P +G+ D ++K WD+ +
Sbjct: 64 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFI 123
Query: 225 PETSGVRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHE 278
S + + F P+G G ++ ++F + HD + G + ++
Sbjct: 124 GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR--S 181
Query: 279 GKLLGCSYNQSCVGVW 294
G+LL Y+ +W
Sbjct: 182 GRLLLAGYDDFNCNIW 197
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 38/125 (30%), Positives = 56/125 (44%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS---GIDSVS 66
Q F+ H S +N + + TG +D L+ + +L S H + GI SV+
Sbjct: 120 QTFIGHESDINAVAFF-PNGYAFTTGSDDATCRLFDLRADQELLMYS-HDNIICGITSVA 177
Query: 67 FDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTN 124
F S L+ AG +WD + L GH R +C+ V G A+GS D+
Sbjct: 178 FSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSF 235
Query: 125 LKIWD 129
LKIW+
Sbjct: 236 LKIWN 240
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 278 (102.9 bits), Expect = 5.9e-21, P = 5.9e-21
Identities = 53/184 (28%), Positives = 92/184 (50%)
Query: 32 LVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEE 90
L++ ED + W + N +L GH + + + A+ + T +LW +
Sbjct: 357 LLSCSEDMSIRYWDLRSFTNTVL-YQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDR 415
Query: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIR 150
+R GH + V FHP + A+GS D +++W ++ + + GH V A+
Sbjct: 416 TYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALA 475
Query: 151 FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
F+P+G+++ S GED +KLWDL +G L + + H I + F P L+A+ S D +V+
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVR 535
Query: 211 FWDL 214
WD+
Sbjct: 536 VWDI 539
Score = 252 (93.8 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 62/220 (28%), Positives = 96/220 (43%)
Query: 55 LSGHTSGIDSVSF--DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF 112
L GH + S F DSS +L + S I+ WDL GH +D P
Sbjct: 338 LRGHCGPVYSTRFLSDSSGLLSCSEDMS--IRYWDLRSFTNTVLYQGHAYPVWDLDISPC 395
Query: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
+FAS S D ++W + + Y GH V+ ++F P+ ++ +G D TV+LW
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWST 455
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC 232
G + F H G + + F P+ LA+ D+ +K WDL + L T +
Sbjct: 456 QQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 233 LTFNPDGRTLL-CGLHESLKVFSWEPIRCHDAVDVGWSRL 271
LTF+PD + + S++V+ C+ D S L
Sbjct: 516 LTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSEL 555
Score = 242 (90.2 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
S + D LW+ + + +GH +D V F + +A G+ T++LW
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWST 455
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNA 148
++ VR TGHR +++ F P G++ AS D LK+WD+ +GHT + +
Sbjct: 456 QQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 149 IRFTPDGRWVVSGGEDNTVKLWDL 172
+ F+PD + S DN+V++WD+
Sbjct: 516 LTFSPDSSLIASASMDNSVRVWDI 539
Score = 213 (80.0 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 41/131 (31%), Positives = 67/131 (51%)
Query: 5 RAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDS 64
R Y L+ + H V+C+K +S L TG D V LW+ + N++ +GH + +
Sbjct: 415 RTYPLRIYAGHLLDVDCVKF-HPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLA 473
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
++F + +A+ +KLWDL + + L GH N S+ F P AS S+D +
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNS 533
Query: 125 LKIWDIRKKGC 135
+++WDIR C
Sbjct: 534 VRVWDIRNTYC 544
Score = 186 (70.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 65/250 (26%), Positives = 101/250 (40%)
Query: 12 FVAHSSTVNCLKIGRKS--SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF-- 67
F A +T L S S++L G ++ V LW++ L H + +
Sbjct: 261 FYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSKK--LKSEPHLVDVSRIRLAC 318
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
D + ++GT E KI+R GH S F S S D +++
Sbjct: 319 DILDEEEEEDDSAGT-------EMKILR---GHCGPVYSTRFLSDSSGLLSCSEDMSIRY 368
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
WD+R Y+GH V + +P + S D T +LW L + H
Sbjct: 369 WDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLD 428
Query: 188 IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL-CGL 246
+ C+ FHP+ LATGS D+TV+ W + + V L F+P+G+ L G
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGE 488
Query: 247 HESLKVFSWE 256
+ LK+ W+
Sbjct: 489 DQRLKL--WD 496
Score = 123 (48.4 bits), Expect = 0.00051, P = 0.00051
Identities = 25/106 (23%), Positives = 47/106 (44%)
Query: 2 TTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG 61
+T++ ++ F H V L + + L + GED ++ LW + L GHT
Sbjct: 454 STQQGNSVRLFTGHRGPVLALAFS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 512
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISV 107
I S++F L+A+ + ++++WD+ G S + V
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGV 558
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 277 (102.6 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 63/213 (29%), Positives = 107/213 (50%)
Query: 55 LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
L GH G+ +V F ++A+G A G +K+W K++ T GH + ++ + P G
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 115 FFASGSLDTNLKIWDIRKKGCIHT--YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDL 172
ASGS D +++W++ G H + GH V AI F+P G +VSG D V LWD+
Sbjct: 232 TIASGSDDKTIRLWNVLT-GKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 173 TAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE----LIGSAGPETS 228
+ +++ H + ID L+A+ + D V+ WD T + L+ P S
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVS 350
Query: 229 GVRCLTFNPDGRTLLCG-LHESLKVFSWEPIRC 260
V+ F+P+G+ +L L + ++++ + RC
Sbjct: 351 SVK---FSPNGKYVLAWTLDDCVRLWDYVEGRC 380
Score = 250 (93.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 59/210 (28%), Positives = 103/210 (49%)
Query: 10 QEFV--AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
Q+F+ H V+ ++ +S ++ +GG D V +WA I + GH +GI ++S+
Sbjct: 168 QKFLLRGHLRGVSAVRFSPDAS-MIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRT-LTGHRSNCISVDFHPFGEFFASGSLDTNLK 126
+A+G+ TI+LW++ K T GH + ++ F P G SGS D +
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG 186
+WD+R + + H+ V+ I DG + S D V++WD + G+ L HE
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL-VHED 345
Query: 187 Q--IQCIDFHPH-EFLLATGSADRTVKFWD 213
+ + F P+ +++LA + D V+ WD
Sbjct: 346 NPPVSSVKFSPNGKYVLAW-TLDDCVRLWD 374
Score = 245 (91.3 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 74/250 (29%), Positives = 118/250 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHT---SGIDSVSFD 68
F+ H + V + K + +LV+G D V LW + + SL H+ SGID V +D
Sbjct: 257 FIGHHNYVYAIAFSPKGN-MLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVV-WD 314
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFHPFGEFFASGSLDTNLK 126
+ L+A+ A G +++WD + +RTL H N SV F P G++ + +LD ++
Sbjct: 315 GT--LIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSVKFSPNGKYVLAWTLDDCVR 371
Query: 127 IWDIRKKGCIHTYKGHTR---------GVNAIRF---TPDGRWVVSGGEDNTVKLWDLTA 174
+WD + C+ TY+GH+ GV TP + VSG ED + WD+
Sbjct: 372 LWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVT 431
Query: 175 GKLLHDFKCHEGQIQCIDF---HPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVR 231
K+L + H+G + +D F+++ G D TV+ W+ E PE +
Sbjct: 432 KKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCG-LDGTVRVWEEVGPEREPEPEPEPEPGQ 490
Query: 232 CLTFNPD-GR 240
C + D GR
Sbjct: 491 CPDQDQDQGR 500
Score = 221 (82.9 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 75/261 (28%), Positives = 111/261 (42%)
Query: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGR 156
L GH +V F P ASG D +K+W I+T++GH G++ I ++PDG
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 157 WVVSGGEDNTVKLWDLTAGKLLHD--FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDL 214
+ SG +D T++LW++ GK H F H + I F P +L +GS D V WD+
Sbjct: 232 TIASGSDDKTIRLWNVLTGKA-HPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 215 ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDL 274
+ ++ S + V + DG TL+ V W+ G L L
Sbjct: 291 RSARVMKSLPAHSDPVSGIDVVWDG-TLIASCATDGLVRIWD-------TSTGQC-LRTL 341
Query: 275 NVHEGK----LLGCSYNQSCVGVWVVD-ISRIEPYTIGSVTRV-NGLSESKSSASGNLSV 328
VHE + S N V W +D R+ Y G + G S K S SG V
Sbjct: 342 -VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGV 400
Query: 329 LNENSAKASLG-KLSVSQNSD 348
++ + G +VS + D
Sbjct: 401 YGQSIPGRTPGYAFAVSGSED 421
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 60/234 (25%), Positives = 112/234 (47%)
Query: 32 LVTGGEDHKVNLWAIGKPNAIL---SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
LVTGG D V +W + + N + L GH G+ SV+ S +A+ + T+ LWD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT-RGVN 147
L+ + +V F P ++ SG D + ++ + T +
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTL 174
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
+I ++PDG+++ SG D + ++D+ AGK++ + H ++ + F P+ LL T S D
Sbjct: 175 SIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDG 234
Query: 208 TVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRC 260
+K +D+ +++G+ S V C+ F+ DG+ + S+K++ +C
Sbjct: 235 HMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKC 288
Score = 242 (90.2 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 49/185 (26%), Positives = 95/185 (51%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID-SVSFDSSEVLVAAGAASGTIKLWD 87
++ +++G D K++++++ A +L S+++ +A+GA G I ++D
Sbjct: 139 NKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFD 198
Query: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
+ K+V+TL GH S+ F P + + S D ++K++D+ + T GH V
Sbjct: 199 VAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVL 258
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
+ F+ DG+ S DN+VK+WD + K LH F H Q+ + + P +A+ S D+
Sbjct: 259 CVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDK 318
Query: 208 TVKFW 212
++ +
Sbjct: 319 SLNIY 323
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/136 (24%), Positives = 64/136 (47%)
Query: 114 EFFASGSLDTNLKIWDIRKKGCI---HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLW 170
+F +G LD +K+WD+++ + H KGH GV ++ + DG+ + S D+T+ LW
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 171 DLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGV 230
D +G H + + F P + +G D + + +ET + + +
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKY 172
Query: 231 RC-LTFNPDGRTLLCG 245
+ ++PDG+ + G
Sbjct: 173 TLSIAYSPDGKYIASG 188
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
+Q H+ V L +S++L+T +D + L+ + + + +LSGH S + V+F
Sbjct: 205 VQTLEGHAMPVRSLCFS-PNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFS 263
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
A+ ++ ++K+WD E K + T H V + P + AS S D +L I+
Sbjct: 264 EDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 256 (95.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 67/237 (28%), Positives = 110/237 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G LS HT + F D + ++ ++G T
Sbjct: 108 SGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + GH +C+S+ P + F SG+ D + K+WD+R+ C T+ GH
Sbjct: 166 CALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQC----IDFHPHEF 198
+NAI F P+G + +G +D + +L+DL A + L + + I C + F
Sbjct: 226 ESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYS--QESIICGITSVAFSLSGR 283
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
LL G D WD E +G + V CL DG + G +S LK+++
Sbjct: 284 LLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 57/249 (22%), Positives = 103/249 (41%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + + L+ + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I++++ ++G + + HT ++ RF D V S G D T L
Sbjct: 110 NFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + P L +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHE-SLKVFSW---EPIRCHDAVDVGWSRLSDLNVHEGKLLGCS 285
+ + F P+G + G + S ++F + + + + S G+LL
Sbjct: 229 INAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIICGITSVAFSLSGRLLFAG 288
Query: 286 YNQSCVGVW 294
Y+ VW
Sbjct: 289 YDDFNCNVW 297
Score = 149 (57.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 40/155 (25%), Positives = 64/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L + G K+ + H G + C F ++ T S D T
Sbjct: 109 GNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIV-TSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + T L +PD + + G
Sbjct: 168 LWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISG 202
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 278 (102.9 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 81/254 (31%), Positives = 126/254 (49%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-G-KPNAILSLSGHTSGIDSVSFDS 69
F AH VN ++ SR+L TGG D +V LW + G K SLSG +GI S+ FDS
Sbjct: 334 FDAHDGEVNAVQFS-PGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDS 392
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ + A + ++W +++ ++ TLTGH +S F SGS D LK+WD
Sbjct: 393 AGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWD 452
Query: 130 IRKKGCIHT-YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQI 188
+R K CI T + G + N I T + V+SG D ++ WD+ + ++ + + G+I
Sbjct: 453 LRSKVCIKTVFAGSS--CNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVREMELL-GKI 507
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDL------ETFELIG-SAGPETSGVRCLTFNPDGRT 241
+D +P L + S D +K DL +TF G G + + R + F+PDG
Sbjct: 508 TALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWT--RAV-FSPDGSY 564
Query: 242 LLCGLHESLKVFSW 255
+ G E ++ W
Sbjct: 565 VAAGAAEG-SLYIW 577
Score = 219 (82.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 57/209 (27%), Positives = 98/209 (46%)
Query: 49 PNAILSL-SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL--EEAKIVRTLTGHRSNCI 105
P +S+ H +++V F L+A G +KLW++ ++ + +L+G +
Sbjct: 327 PTTAMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGIT 386
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
S++F G + + S D +IW + HT GH+ V + +F D +VSG D
Sbjct: 387 SIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR 446
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGP 225
T+KLWDL + K+ K C D E + +G D+ ++FWD+ + ++
Sbjct: 447 TLKLWDLRS-KVC--IKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREM-- 501
Query: 226 ETSG-VRCLTFNPDGRTLL-CGLHESLKV 252
E G + L NP+ LL C + LK+
Sbjct: 502 ELLGKITALDLNPERTELLSCSRDDLLKI 530
Score = 173 (66.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 50/194 (25%), Positives = 84/194 (43%)
Query: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH--TYKGHTRGVNAIRFTPDGRW 157
H +V F P A+G +D +K+W++ C + G G+ +I F G +
Sbjct: 337 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSY 396
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+++ D ++W + +L H H G++ F + +GS DRT+K WDL +
Sbjct: 397 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 456
Query: 218 ELIGS--AGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAVD----VGWSRL 271
I + AG + + C + ++ G H K+ W+ IR V +G
Sbjct: 457 VCIKTVFAGSSCNDIVCTE-----QCVMSG-HFDKKIRFWD-IRSESIVREMELLGKITA 509
Query: 272 SDLNVHEGKLLGCS 285
DLN +LL CS
Sbjct: 510 LDLNPERTELLSCS 523
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 52/195 (26%), Positives = 87/195 (44%)
Query: 7 YKLQE-FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV 65
Y+L+ HS V K ++R+ V+G D + LW + I ++ +S D V
Sbjct: 414 YRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 472
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+E V +G I+ WD+ IVR + ++D +P S S D L
Sbjct: 473 C---TEQCVMSGHFDKKIRFWDIRSESIVREME-LLGKITALDLNPERTELLSCSRDDLL 528
Query: 126 KIWDIRKKGCIHTYK--GHTRGVNAIR--FTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
KI D+R T+ G G + R F+PDG +V +G + ++ +W++ +GK+
Sbjct: 529 KIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVL 588
Query: 182 -KCHEGQIQCIDFHP 195
K H I + + P
Sbjct: 589 SKHHSSSINAVAWSP 603
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 49/231 (21%), Positives = 100/231 (43%)
Query: 32 LVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEA 91
L+ D +W + +L+GH+ + S F + +G+ T+KLWDL
Sbjct: 397 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSK 456
Query: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRF 151
++T+ S+C D + SG D ++ WDIR + + + + + A+
Sbjct: 457 VCIKTVFAG-SSCN--DIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGK-ITALDL 512
Query: 152 TPDGRWVVSGGEDNTVKLWDLTAGKLLHDF-----KCHEGQIQCIDFHPHEFLLATGSAD 206
P+ ++S D+ +K+ DL + F KC + + F P +A G+A+
Sbjct: 513 NPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAV-FSPDGSYVAAGAAE 571
Query: 207 RTVKFWDLET--FELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSW 255
++ W++ + E + S +S + + ++P G ++ + + K W
Sbjct: 572 GSLYIWNVLSGKVEKVLSKH-HSSSINAVAWSPAGSHVVT-VDKGSKAVLW 620
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 255 (94.8 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 68/236 (28%), Positives = 109/236 (46%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++ + G L GHT + F D S+++ ++G T
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDT--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E A+ T TGH + +S+ P F SG+ D + K+WDIR C ++ GH
Sbjct: 166 CALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P+G +G +D T +L+DL A + L + H+ I + F L
Sbjct: 226 VSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYS-HDNIICGITSVAFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD + G + V CL DG + G +S L++++
Sbjct: 285 LLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 248 (92.4 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 74/275 (26%), Positives = 123/275 (44%)
Query: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDL 88
SR+LV+ +D K+ +W N + ++ +S + + ++ S VA G +++L
Sbjct: 67 SRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126
Query: 89 E----EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
+ ++ R L GH F + S DT +WDI T+ GH+
Sbjct: 127 KTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSG-DTTCALWDIETAQQTTTFTGHSG 185
Query: 145 GVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGS 204
V ++ +PD R VSG D + KLWD+ G F H I + F P+ + ATGS
Sbjct: 186 DVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGS 245
Query: 205 ADRTVKFWDLETFE--LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHD 262
D T + +DL + L+ S G+ + F+ GR LL G ++ W+ ++
Sbjct: 246 DDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAG-YDDFNCNVWDTLKGDR 304
Query: 263 A-VDVGW-SRLSDLNV-HEGKLLGCSYNQSCVGVW 294
A V G +R+S L V +G + S + +W
Sbjct: 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 190 (71.9 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 56/251 (22%), Positives = 106/251 (42%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + L+ + + G + +WD + + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
+ A G LD I++++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSG-DTTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ + F H G + + P +G+ D + K WD+ S S
Sbjct: 169 WDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ ++F P+G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSK--SGRLLL 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 48/186 (25%), Positives = 78/186 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L IWD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN +++L G ++ + H G + C F + + T S D T
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLD-DSQIVTSSGDTTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCHDAVDVGWS 269
WD+ET + + + V L+ +PD RT + G + S K++ C +
Sbjct: 168 LWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFT---G 224
Query: 270 RLSDLN 275
+SD+N
Sbjct: 225 HVSDIN 230
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 255 (94.8 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 72/264 (27%), Positives = 127/264 (48%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCL--KIGRKSS-RVLVTGGEDHKVNLWAIGKPNAIL--SL 55
MT + + ++ AH + + + +K + +VTG D V +W L SL
Sbjct: 1 MTNQYSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSL 60
Query: 56 SGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEF 115
GH G+ SV + + A+ + I+LWDLE K ++++ + ++ F P +
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQH 120
Query: 116 FASGSLDTNLKIWDIRKKGCIHTYKGHTRG--VNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
A+G+ + I+ + + G Y TRG + +I ++PDG+++ SG D + ++D+
Sbjct: 121 LATGTHMGKVNIFGV-ESGK-KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
GKLLH + H I+ + F P LL T S D +K +D++ L G+ S V +
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV 238
Query: 234 TFNPDGRTLLCGLHE-SLKVFSWE 256
F PD + + S+KV W+
Sbjct: 239 AFCPDDTHFVSSSSDKSVKV--WD 260
Score = 224 (83.9 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 44/142 (30%), Positives = 78/142 (54%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L +G D +N++ I + +L GH I S++F L+ + G IK++D++
Sbjct: 161 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 220
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAI 149
A + TL+GH S ++V F P F S S D ++K+WD+ + CIHT+ H V +
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGV 280
Query: 150 RFTPDGRWVVSGGEDNTVKLWD 171
++ +G +VS G+D + ++D
Sbjct: 281 KYNGNGSKIVSVGDDQEIHVYD 302
Score = 214 (80.4 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 49/217 (22%), Positives = 102/217 (47%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D + LW + + S+ +++F +A G G + ++ +E K +L
Sbjct: 85 DAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSL 144
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
+S+ + P G++ ASG++D + I+DI +HT +GH + ++ F+PD +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETF 217
+V+ +D +K++D+ L H + + F P + + S+D++VK WD+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 218 ELIGSAGPETSGVRCLTFNPDGRTLLC-GLHESLKVF 253
I + V + +N +G ++ G + + V+
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 277 (102.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 59/202 (29%), Positives = 95/202 (47%)
Query: 13 VAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV 72
+ H+ V + I + +L + ED LW+ + I+ +GH + I V F
Sbjct: 400 IGHTRPVFGVSISPQKEFIL-SCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGY 458
Query: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
A + T +LWD+E A +R GH+++ V FHP + A+GS D ++WD+R
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRT 518
Query: 133 KGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCID 192
G + + H V+A+ + DG + S E +K+WDL + F H + +
Sbjct: 519 GGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLS 578
Query: 193 FHPHEFLLATGSADRTVKFWDL 214
F +L +G AD V FWDL
Sbjct: 579 FSYDNKILVSGGADTDVNFWDL 600
Score = 259 (96.2 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 17 STVNCLKIGRKSSRVLVTGGEDHKVNLWA---------IGKPNAIL---SLSGHTSGIDS 64
S VNC +S + G D ++L++ +G N L SL GHT +
Sbjct: 350 SAVNCAAFSDDAS-MFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFG 408
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
VS + + + + G +LW + + GH + V F PFG +FA+ S D
Sbjct: 409 VSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQT 468
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCH 184
++WD+ + + GH V+ + F P+ ++ +G D+T ++WD+ G + F H
Sbjct: 469 ARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAH 528
Query: 185 EGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLC 244
+ + LA+ +K WDL + S +S V L+F+ D + L+
Sbjct: 529 HSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVS 588
Query: 245 G 245
G
Sbjct: 589 G 589
Score = 197 (74.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 34 TGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKI 93
T D LW + + GH + +D VSF + +A G++ T ++WD+
Sbjct: 462 TASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGT 521
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
VR H S ++ G AS +K+WD+R ++ H+ V ++ F+
Sbjct: 522 VRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSY 581
Query: 154 DGRWVVSGGEDNTVKLWDLTA------GK---LLHDFKCHEGQIQCIDFHPHEFLLATGS 204
D + +VSGG D V WDLT G+ LL +FK IQ + F + LA S
Sbjct: 582 DNKILVSGGADTDVNFWDLTYRNNLSDGEQSPLLFNFKTKNTIIQNLSFTRRNYCLALSS 641
Query: 205 A 205
+
Sbjct: 642 S 642
Score = 161 (61.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 4 KRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGID 63
+ A L+ FV H + V+C+ ++ L TG DH +W + + + H S +
Sbjct: 475 EHAAPLRVFVGHQNDVDCVSF-HPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVS 533
Query: 64 SVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
++ + + +A+ SG IK+WDL + + H S S+ F + SG DT
Sbjct: 534 ALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADT 593
Query: 124 NLKIWDI 130
++ WD+
Sbjct: 594 DVNFWDL 600
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 253 (94.1 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 65/223 (29%), Positives = 101/223 (45%)
Query: 33 VTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAK 92
+TGGED N + I K S GH+ + V+ + + + T++LWDLE +
Sbjct: 47 LTGGED---NQYGIPKK----SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGE 99
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
+ GH+ + +SV S S D +K+W+ + C+ T GH V+A+R +
Sbjct: 100 TTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGE-CMATLTGHNDWVSAVRIS 158
Query: 153 PDGR--WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
P + V+S D TVK WDL + DF H G I CI P L A+ D +
Sbjct: 159 PSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVII 218
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVF 253
WDL + + + + V L F+P+ L +K+F
Sbjct: 219 LWDLNKNKTLYTLEAKAE-VHALAFSPNRYWLAAATTSGIKIF 260
Score = 179 (68.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILSLSGHTSGIDSVSF- 67
Q FV H V + I K+ R +V+ D V +W IG+ + +L+GH + +V
Sbjct: 102 QRFVGHKGDVLSVSIA-KNLRQIVSASRDKTVKVWNTIGE--CMATLTGHNDWVSAVRIS 158
Query: 68 --DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
D S +++A + T+K WDL + + GH + P G AS D +
Sbjct: 159 PSDQSSTVISA-SWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVI 217
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+WD+ K ++T + V+A+ F+P+ W+ + +K++ L LL + K
Sbjct: 218 ILWDLNKNKTLYTLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELK 272
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 57/246 (23%), Positives = 108/246 (43%)
Query: 89 EEAKIVR-TLTGHR---SNCISVDFHPFGEFFASGSLDTNLKIWDI-----RKKGCIH-T 138
+E ++R TL GH ++ + HP + SGS D L W + + G +
Sbjct: 4 QEVLVLRGTLEGHNGWVTSLATTPAHP--DLLLSGSRDKTLIKWKLTGGEDNQYGIPKKS 61
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
+KGH+ V + + DG + +S D T++LWDL G+ F H+G + + +
Sbjct: 62 FKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLR 121
Query: 199 LLATGSADRTVKFWDL--ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+ + S D+TVK W+ E + S VR + + +++K SW+
Sbjct: 122 QIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVK--SWD 179
Query: 257 PIRCHDAVD-VGWSR-LSDLNVH-EGKLLGCSYNQSCVGVWVVDISRIEP-YTIGSVTRV 312
D +G + +S + + +G L + + +W D+++ + YT+ + V
Sbjct: 180 LADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW--DLNKNKTLYTLEAKAEV 237
Query: 313 NGLSES 318
+ L+ S
Sbjct: 238 HALAFS 243
Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 37/167 (22%), Positives = 77/167 (46%)
Query: 15 HSSTVNCLKIGRKS-SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
H+ V+ ++I S +++ D V W + + GHT I ++ L
Sbjct: 148 HNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSL 207
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
A+ G I LWDL + K + TL ++ ++ F P ++ + + + +KI+ ++++
Sbjct: 208 CASAGKDGVIILWDLNKNKTLYTLEA-KAEVHALAFSP-NRYWLAAATTSGIKIFKLQER 265
Query: 134 GCIHTYK-----GHT-RGVNAIR--FTPDGRWVVSGGEDNTVKLWDL 172
+ K G T + AI ++ DG+ + +G DN +++W +
Sbjct: 266 SLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQV 312
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 253 (94.1 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 65/223 (29%), Positives = 101/223 (45%)
Query: 33 VTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAK 92
+TGGED N + I K S GH+ + V+ + + + T++LWDLE +
Sbjct: 47 LTGGED---NQYGIPKK----SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGE 99
Query: 93 IVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFT 152
+ GH+ + +SV S S D +K+W+ + C+ T GH V+A+R +
Sbjct: 100 TTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGE-CMATLTGHNDWVSAVRIS 158
Query: 153 PDGR--WVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
P + V+S D TVK WDL + DF H G I CI P L A+ D +
Sbjct: 159 PSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVII 218
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVF 253
WDL + + + + V L F+P+ L +K+F
Sbjct: 219 LWDLNKNKTLYTLEAKAE-VHALAFSPNRYWLAAATTSGIKIF 260
Score = 179 (68.1 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 47/177 (26%), Positives = 82/177 (46%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLW-AIGKPNAILSLSGHTSGIDSVSF- 67
Q FV H V + I K+ R +V+ D V +W IG+ + +L+GH + +V
Sbjct: 102 QRFVGHKGDVLSVSIA-KNLRQIVSASRDKTVKVWNTIGE--CMATLTGHNDWVSAVRIS 158
Query: 68 --DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
D S +++A + T+K WDL + + GH + P G AS D +
Sbjct: 159 PSDQSSTVISA-SWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVI 217
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+WD+ K ++T + V+A+ F+P+ W+ + +K++ L LL + K
Sbjct: 218 ILWDLNKNKTLYTLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELK 272
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 57/246 (23%), Positives = 108/246 (43%)
Query: 89 EEAKIVR-TLTGHR---SNCISVDFHPFGEFFASGSLDTNLKIWDI-----RKKGCIH-T 138
+E ++R TL GH ++ + HP + SGS D L W + + G +
Sbjct: 4 QEVLVLRGTLEGHNGWVTSLATTPAHP--DLLLSGSRDKTLIKWKLTGGEDNQYGIPKKS 61
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
+KGH+ V + + DG + +S D T++LWDL G+ F H+G + + +
Sbjct: 62 FKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLR 121
Query: 199 LLATGSADRTVKFWDL--ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+ + S D+TVK W+ E + S VR + + +++K SW+
Sbjct: 122 QIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVK--SWD 179
Query: 257 PIRCHDAVD-VGWSR-LSDLNVH-EGKLLGCSYNQSCVGVWVVDISRIEP-YTIGSVTRV 312
D +G + +S + + +G L + + +W D+++ + YT+ + V
Sbjct: 180 LADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW--DLNKNKTLYTLEAKAEV 237
Query: 313 NGLSES 318
+ L+ S
Sbjct: 238 HALAFS 243
Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 37/167 (22%), Positives = 77/167 (46%)
Query: 15 HSSTVNCLKIGRKS-SRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
H+ V+ ++I S +++ D V W + + GHT I ++ L
Sbjct: 148 HNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSL 207
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
A+ G I LWDL + K + TL ++ ++ F P ++ + + + +KI+ ++++
Sbjct: 208 CASAGKDGVIILWDLNKNKTLYTLEA-KAEVHALAFSP-NRYWLAAATTSGIKIFKLQER 265
Query: 134 GCIHTYK-----GHT-RGVNAIR--FTPDGRWVVSGGEDNTVKLWDL 172
+ K G T + AI ++ DG+ + +G DN +++W +
Sbjct: 266 SLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQV 312
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 272 (100.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 63/293 (21%), Positives = 141/293 (48%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDS 69
Q+F A +V C++ ++V+G +D V++W + + L GH+ + + F
Sbjct: 215 QDFRATLDSVYCVQY---DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCR 271
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
L+ +G++ TI +WD + + ++ GH N + V + S S D ++W
Sbjct: 272 RRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHTARVWR 329
Query: 130 IRK----KGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
+ + C+H +GH VN+++++ +V+ D T++ WD+T G + H+
Sbjct: 330 LDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQ 389
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
I C ++ +F+++ GS+D T++ ++ + +L+ +R + FN D + + G
Sbjct: 390 RGIACAQYNG-KFIVS-GSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFN-DEKIVSGG 446
Query: 246 LHESLKVFSWEPIRCHDAVDVGW-SRLSDLNVHEGKLLGCSYNQSCVGVWVVD 297
+++++++ H + SR+ L +++ C+++ + VW D
Sbjct: 447 YDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSEIL-VWNFD 498
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 252 (93.8 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 67/236 (28%), Positives = 107/236 (45%)
Query: 28 SSRVLVTGGEDHKVNLWAI----GKPNAILSLSGHTSGIDSVSF-DSSEVLVAAGAASGT 82
S + GG D+ +++++ G L GHT + F D ++++ ++G T
Sbjct: 108 SGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDM--T 165
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
LWD+E + TGH + +S+ P F SG+ D + K+WDIR C T+ GH
Sbjct: 166 CALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGH 225
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG---QIQCIDFHPHEFL 199
+NA+ F P G +G +D T +L+D+ A + L + H+ I + F L
Sbjct: 226 ESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYS-HDNIICGITSVAFSKSGRL 284
Query: 200 LATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFS 254
L G D WD E G + V CL DG + G +S LK+++
Sbjct: 285 LFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 189 (71.6 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
+L GH + I ++ + S + + + G + +WD V + S ++ + P G
Sbjct: 50 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 114 EFFASGSLDTNLKIWDIR-KKGCIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKL 169
F A G LD I+ ++ ++G + + GHT ++ RF D + V S G D T L
Sbjct: 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-DMTCAL 168
Query: 170 WDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSG 229
WD+ G+ F H G + + P +G+ D + K WD+ + S
Sbjct: 169 WDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESD 228
Query: 230 VRCLTFNPDGRTLLCGLHESL-KVFSWEP-----IRCHDAVDVGWSRLSDLNVHEGKLLG 283
+ + F P G G ++ ++F + HD + G + ++ G+LL
Sbjct: 229 INAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSK--SGRLLF 286
Query: 284 CSYNQSCVGVW 294
Y+ VW
Sbjct: 287 AGYDDFNCNVW 297
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 42/155 (27%), Positives = 65/155 (41%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
RTL GH + ++ + S S D L +WD +H + V + P
Sbjct: 49 RTLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 155 GRWVVSGGEDNTVKLWDLTA--G--KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVK 210
G +V GG DN ++ L G ++ + H G + C F ++ T S D T
Sbjct: 109 GSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIV-TSSGDMTCA 167
Query: 211 FWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
WD+ET + + T V L+ +PD RT + G
Sbjct: 168 LWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISG 202
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 274 (101.5 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 65/255 (25%), Positives = 113/255 (44%)
Query: 11 EFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSS 70
+FV H V C+K + + G+D ++ LW + + H I S+SF +
Sbjct: 84 KFVGHKGAVYCVKYS-PDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSAD 142
Query: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
+ + + T+KLW L++ K + + GH++ S P ASGS D + +WD+
Sbjct: 143 GGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDL 202
Query: 131 R---------------KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG 175
K I++Y H V+ + F PDG ++S D+ +K+ D+ +
Sbjct: 203 NFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSN 262
Query: 176 KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTF 235
KL+ + H+ Q+ I HP + LA+ +D +K WDL I + + + F
Sbjct: 263 KLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQF 322
Query: 236 NPDGRTLLCGLHESL 250
N G G ++L
Sbjct: 323 NQSGDYFATGGSQNL 337
Score = 231 (86.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 60/214 (28%), Positives = 90/214 (42%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
AH + + L++ +D + LW + + S +GH + + S L
Sbjct: 129 AHCGAIRSMSFSADGG-YLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRL 187
Query: 74 VAAGAASGTIKLWDLEEAKIVR---TL------------TGHRSNCISVDFHPFGEFFAS 118
VA+G+ T+ LWDL KIV TL + H V FHP G S
Sbjct: 188 VASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLIS 247
Query: 119 GSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLL 178
S D +KI DIR I Y H VN+I P G ++ S G D+ +K+WDL G+ +
Sbjct: 248 SSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQI 307
Query: 179 HDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
+ ++ I + F+ ATG + W
Sbjct: 308 YTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 205 (77.2 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
S GH I FD VA+ + + +W+ + + GH+ V + P G
Sbjct: 42 SFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDG 101
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
E AS D +++W + K H + ++ F+ DG +++S +D T+KLW L
Sbjct: 102 ETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQ 161
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
K + F H+ ++ P L+A+GS D+TV WDL F+ I S
Sbjct: 162 DKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLN-FQKIVS 209
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 44/162 (27%), Positives = 73/162 (45%)
Query: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPD 154
R+ GH DF P AS S D+ + +W+ + + + GH V ++++PD
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 155 GRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDL 214
G + S G+D ++LW T K H G I+ + F L + S D+T+K W L
Sbjct: 101 GETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRL 160
Query: 215 ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+ + + S + VR +PD R + G + V W+
Sbjct: 161 QDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKT-VMLWD 201
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 271 (100.5 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 59/161 (36%), Positives = 85/161 (52%)
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
I SV F L+A GA I++WDL +I++ L GH + S+DF P G+ SGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
D +++IWD+R C T GV + +PDG+ + +G D TV++WD T G L+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 182 KC-------HEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
HE + + F + +A+GS DRTVK W LE
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE 417
Score = 240 (89.5 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 68/228 (29%), Positives = 103/228 (45%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
++TKR K+ H + L R LV+G D V +W + L+LS
Sbjct: 284 LSTKRIIKILR--GHEQDIYSLDFFPDGDR-LVSGSGDRSVRIWDLRTSQCSLTLSIE-D 339
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL-------TGHRSNCISVDFHPFG 113
G+ +V+ L+AAG+ T+++WD +V L GH + SV F G
Sbjct: 340 GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 114 EFFASGSLDTNLKIWDI-----RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
E ASGSLD +K+W + +K C TY GH V ++ TPD +++SG +D V
Sbjct: 400 EQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVI 459
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPH----EFLLATGSADRTVKFW 212
WD +G L + H + + + E + ATGS D + W
Sbjct: 460 FWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 214 (80.4 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 60/198 (30%), Positives = 92/198 (46%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
++L TG ED + +W + I L GH I S+ F + +G+ ++++WDL
Sbjct: 268 KLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLR 327
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-------KGH 142
++ TL+ +V P G+ A+GSLD +++WD + GH
Sbjct: 328 TSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGH 386
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF------HP- 195
V ++ F+ +G + SG D TVKLW L GK C I DF P
Sbjct: 387 EDSVYSVAFSNNGEQIASGSLDRTVKLWHLE-GKSDKKSTCEVTYIGHKDFVLSVCCTPD 445
Query: 196 HEFLLATGSADRTVKFWD 213
+E++L+ GS DR V FWD
Sbjct: 446 NEYILS-GSKDRGVIFWD 462
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 51/159 (32%), Positives = 82/159 (51%)
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
SV F P G+ A+G+ D ++IWD+ K I +GH + + ++ F PDG +VSG D
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDR 319
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET-F--ELIGS 222
+V++WDL + +G + + P L+A GS DRTV+ WD T F E + S
Sbjct: 320 SVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDS 378
Query: 223 AGPETSG----VRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+G V + F+ +G + G L ++K++ E
Sbjct: 379 GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE 417
Score = 186 (70.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 36/112 (32%), Positives = 65/112 (58%)
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
+ ++ F+PDG+ + +G ED +++WDL+ +++ + HE I +DF P L +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 206 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
DR+V+ WDL T + + E GV + +PDG+ + G L +++V W+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRV--WD 366
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/175 (25%), Positives = 85/175 (48%)
Query: 136 IHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL---LHDFKCHEGQ----- 187
+H+ H+ V +RF+ DG+++ +G + T +++++T G+L L D +E +
Sbjct: 194 VHSLD-HSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTT 251
Query: 188 ------IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRT 241
I+ + F P LLATG+ D+ ++ WDL T +I + L F PDG
Sbjct: 252 ASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 242 LLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLNVH-EGKLLGCSYNQSCVGVW 294
L+ G + S++++ +C + + ++ + V +GKL+ V VW
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVW 365
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 271 (100.5 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 59/161 (36%), Positives = 85/161 (52%)
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
I SV F L+A GA I++WDL +I++ L GH + S+DF P G+ SGS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
D +++IWD+R C T GV + +PDG+ + +G D TV++WD T G L+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 182 KC-------HEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
HE + + F + +A+GS DRTVK W LE
Sbjct: 377 DSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE 417
Score = 240 (89.5 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 68/228 (29%), Positives = 103/228 (45%)
Query: 1 MTTKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS 60
++TKR K+ H + L R LV+G D V +W + L+LS
Sbjct: 284 LSTKRIIKILR--GHEQDIYSLDFFPDGDR-LVSGSGDRSVRIWDLRTSQCSLTLSIE-D 339
Query: 61 GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL-------TGHRSNCISVDFHPFG 113
G+ +V+ L+AAG+ T+++WD +V L GH + SV F G
Sbjct: 340 GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 114 EFFASGSLDTNLKIWDI-----RKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVK 168
E ASGSLD +K+W + +K C TY GH V ++ TPD +++SG +D V
Sbjct: 400 EQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVI 459
Query: 169 LWDLTAGKLLHDFKCHEGQIQCIDFHPH----EFLLATGSADRTVKFW 212
WD +G L + H + + + E + ATGS D + W
Sbjct: 460 FWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 214 (80.4 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 60/198 (30%), Positives = 92/198 (46%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
++L TG ED + +W + I L GH I S+ F + +G+ ++++WDL
Sbjct: 268 KLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLR 327
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTY-------KGH 142
++ TL+ +V P G+ A+GSLD +++WD + GH
Sbjct: 328 TSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGH 386
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF------HP- 195
V ++ F+ +G + SG D TVKLW L GK C I DF P
Sbjct: 387 EDSVYSVAFSNNGEQIASGSLDRTVKLWHLE-GKSDKKSTCEVTYIGHKDFVLSVCCTPD 445
Query: 196 HEFLLATGSADRTVKFWD 213
+E++L+ GS DR V FWD
Sbjct: 446 NEYILS-GSKDRGVIFWD 462
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 51/159 (32%), Positives = 82/159 (51%)
Query: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDN 165
SV F P G+ A+G+ D ++IWD+ K I +GH + + ++ F PDG +VSG D
Sbjct: 260 SVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDR 319
Query: 166 TVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLET-F--ELIGS 222
+V++WDL + +G + + P L+A GS DRTV+ WD T F E + S
Sbjct: 320 SVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDS 378
Query: 223 AGPETSG----VRCLTFNPDGRTLLCG-LHESLKVFSWE 256
+G V + F+ +G + G L ++K++ E
Sbjct: 379 GNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLE 417
Score = 186 (70.5 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 36/112 (32%), Positives = 65/112 (58%)
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSA 205
+ ++ F+PDG+ + +G ED +++WDL+ +++ + HE I +DF P L +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 206 DRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
DR+V+ WDL T + + E GV + +PDG+ + G L +++V W+
Sbjct: 318 DRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRV--WD 366
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/175 (25%), Positives = 85/175 (48%)
Query: 136 IHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL---LHDFKCHEGQ----- 187
+H+ H+ V +RF+ DG+++ +G + T +++++T G+L L D +E +
Sbjct: 194 VHSLD-HSSVVCCVRFSRDGKFIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTT 251
Query: 188 ------IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRT 241
I+ + F P LLATG+ D+ ++ WDL T +I + L F PDG
Sbjct: 252 ASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDR 311
Query: 242 LLCGLHE-SLKVFSWEPIRCHDAVDVGWSRLSDLNVH-EGKLLGCSYNQSCVGVW 294
L+ G + S++++ +C + + ++ + V +GKL+ V VW
Sbjct: 312 LVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGKLIAAGSLDRTVRVW 365
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 270 (100.1 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 224 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 280
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 281 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 336
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 337 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 394
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 395 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 422
Score = 252 (93.8 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 57/245 (23%), Positives = 116/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 190 NSKGVYCLQYDDDK---IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVI 244
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 245 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 302
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 303 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 360
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 361 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 415
Query: 252 VFSWE 256
+ W+
Sbjct: 416 IKVWD 420
Score = 242 (90.2 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 264 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 320
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 321 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 376
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 377 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 434
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 435 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 490
Score = 212 (79.7 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 174 WRCGRHNLQRIQCRSENSKGVYCLQYDDDKII--SGLRDNSIKIWDKSSLECLKVLTGHT 231
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 232 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 287
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 288 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 345
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 346 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 383
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 270 (100.1 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 241 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 298 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 353
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 354 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 412 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 439
Score = 252 (93.8 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ + +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 207 NSKGVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVI 261
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 262 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 319
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 320 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 377
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 378 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 432
Query: 252 VFSWE 256
+ W+
Sbjct: 433 IKVWD 437
Score = 242 (90.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 281 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 337
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 338 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 393
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 394 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 451
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 452 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 507
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 191 WRCGRHNLQRIQCRSENSKGVYCLQYDDEKII--SGLRDNSIKIWDKTSLECLKVLTGHT 248
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 249 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 304
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 305 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 362
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 363 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 400
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 270 (100.1 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 241 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 297
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 298 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 353
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 354 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 411
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 412 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 439
Score = 252 (93.8 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ + +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 207 NSKGVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVI 261
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 262 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 319
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 320 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 377
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 378 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 432
Query: 252 VFSWE 256
+ W+
Sbjct: 433 IKVWD 437
Score = 242 (90.2 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 281 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 337
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 338 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 393
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 394 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 451
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 452 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 507
Score = 211 (79.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 191 WRCGRHNLQRIQCRSENSKGVYCLQYDDEKII--SGLRDNSIKIWDKTSLECLKVLTGHT 248
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 249 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 304
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 305 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 362
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 363 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 400
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 272 (100.8 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 67/225 (29%), Positives = 104/225 (46%)
Query: 3 TKRAYKLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
T R ++Q F H + L R R + +G D V LW I A L++ G+
Sbjct: 376 TTRTIRIQ-FAGHEQDIYSLDFAR-DGRTIASGSGDRTVRLWDIENGTA-LTVFTIEDGV 432
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTG---HRSNCISVDFHPFGEFFASG 119
+V+ VAAG+ ++++WDL + V L G H+ + SV F P G +G
Sbjct: 433 TTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTG 492
Query: 120 SLDTNLKIWDIR----------KKG--CIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTV 167
SLD +K+W++ KG C+ T++GH V ++ TPD +WV+SG +D V
Sbjct: 493 SLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGV 552
Query: 168 KLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
+ WD G + H+ + + P ATGS D + W
Sbjct: 553 QFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 256 (95.2 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 59/203 (29%), Positives = 100/203 (49%)
Query: 30 RVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLE 89
+ L TG ED ++ +W I + +GH I S+ F +A+G+ T++LWD+E
Sbjct: 359 KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIE 418
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC----IHTYKGHTRG 145
+ T +V P ++ A+GSLD ++++WD+ + GC + GH
Sbjct: 419 NGTALTVFT-IEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ-GCPVERLEGPDGHKDS 476
Query: 146 VNAIRFTPDGRWVVSGGEDNTVKLWDLTA------------GKLLHDFKCHEGQIQCIDF 193
V ++ F+P+GR +V+G D T+KLW+L G+ + F+ H + +
Sbjct: 477 VYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVAL 536
Query: 194 HPHEFLLATGSADRTVKFWDLET 216
P + +GS DR V+FWD T
Sbjct: 537 TPDNQWVMSGSKDRGVQFWDPRT 559
Score = 242 (90.2 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 70/232 (30%), Positives = 110/232 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSL---SGHTSG---IDSVSFD 68
H S V C++ + + TG + ++ + + L + T+G I SV F
Sbjct: 298 HESVVCCVRFSA-DGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFS 355
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+A GA I++WD+ I GH + S+DF G ASGS D +++W
Sbjct: 356 PDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLW 415
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLHDFKCHE 185
DI + G T GV + +PD ++V +G D +V++WDLT G + L H+
Sbjct: 416 DI-ENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHK 474
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETS-GVRCL-TF 235
+ + F P+ L TGS D+T+K W+L T G+ + S G RC+ TF
Sbjct: 475 DSVYSVAFSPNGRDLVTGSLDKTIKLWELATPR--GNMQNQGSKGGRCVKTF 524
Score = 234 (87.4 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 63/210 (30%), Positives = 106/210 (50%)
Query: 58 HTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCI------SVDFHP 111
H S + V F + VA G + + +++D+ + V L ++ SV F P
Sbjct: 298 HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 112 FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
G++ A+G+ D +++WDI + + GH + + ++ F DGR + SG D TV+LWD
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 172 LTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE----TFELIGSAGPET 227
+ G L F +G + + P +A GS D++V+ WDL L G G +
Sbjct: 417 IENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKD 475
Query: 228 SGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
S V + F+P+GR L+ G L +++K+ WE
Sbjct: 476 S-VYSVAFSPNGRDLVTGSLDKTIKL--WE 502
Score = 201 (75.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 52/174 (29%), Positives = 91/174 (52%)
Query: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR--KKGCI-HTYKGHTRG- 145
+ +V TL H S V F G++ A+G + + +I+D+ +K C+ T G
Sbjct: 289 DVDLVHTLQ-HESVVCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGD 346
Query: 146 --VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATG 203
+ ++ F+PDG+++ +G ED +++WD+T + F HE I +DF +A+G
Sbjct: 347 LYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASG 406
Query: 204 SADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWE 256
S DRTV+ WD+E + E GV + +PD + + G L +S++V W+
Sbjct: 407 SGDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRV--WD 457
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 29 SRVLVTGGEDHKVNLWAI--GKP-NAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKL 85
++ + G D V +W + G P + GH + SV+F + + G+ TIKL
Sbjct: 441 TKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKL 500
Query: 86 WDL------------EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
W+L + + V+T GHR +SV P ++ SGS D ++ WD R
Sbjct: 501 WELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTG 560
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+GH V ++ +P G + +G D ++W T
Sbjct: 561 STQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYT 600
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 270 (100.1 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 258 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 314
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 315 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 370
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 371 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 429 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 456
Score = 252 (93.8 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/245 (23%), Positives = 116/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 224 NSKGVYCLQYDDDK---IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVI 278
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 279 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 336
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 337 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 394
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 395 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 449
Query: 252 VFSWE 256
+ W+
Sbjct: 450 IKVWD 454
Score = 242 (90.2 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 298 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 354
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 355 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 410
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 468
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 469 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 524
Score = 212 (79.7 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 208 WRCGRHNLQRIQCRSENSKGVYCLQYDDDKII--SGLRDNSIKIWDKSSLECLKVLTGHT 265
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 266 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 321
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 322 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 379
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 380 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 417
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 270 (100.1 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 260 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 316
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 317 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 372
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 373 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 430
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 431 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 458
Score = 252 (93.8 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ + +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 226 NSKGVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVI 280
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 281 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 338
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 339 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 396
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 397 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 451
Query: 252 VFSWE 256
+ W+
Sbjct: 452 IKVWD 456
Score = 242 (90.2 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 300 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 356
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 357 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 412
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 413 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 470
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 471 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 526
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 210 WRCGRHNLQRIQCRSENSKGVYCLQYDDEKII--SGLRDNSIKIWDKTSLECLKVLTGHT 267
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 268 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 323
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 324 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 381
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 382 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 419
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 270 (100.1 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 261 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 317
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 318 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 373
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 374 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 431
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 432 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 459
Score = 252 (93.8 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ + +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 227 NSKGVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVI 281
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 282 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 339
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 340 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 397
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 398 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 452
Query: 252 VFSWE 256
+ W+
Sbjct: 453 IKVWD 457
Score = 242 (90.2 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 301 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 357
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 358 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 413
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 414 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 471
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 472 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 527
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 211 WRCGRHNLQRIQCRSENSKGVYCLQYDDEKII--SGLRDNSIKIWDKTSLECLKVLTGHT 268
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 269 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 324
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 325 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 382
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 383 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 420
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 272 (100.8 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 56/184 (30%), Positives = 96/184 (52%)
Query: 8 KLQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF 67
++QEF H V L+ + R+L TG D + +W + I LSGH+ G+ ++ F
Sbjct: 294 RIQEFKGHMDGVLTLQF---NYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF 350
Query: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKI 127
D +++ G+ TI++W+ + + T GH + +SVD + + SGS D +K+
Sbjct: 351 DDRKLIT--GSLDKTIRVWNYITGECISTYRGHSDSVLSVD--SYQKVIVSGSADKTVKV 406
Query: 128 WDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
W + + C +T +GHT VN ++ P S +D T+++WD+ L F+ H GQ
Sbjct: 407 WHVESRTC-YTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQ 465
Query: 188 IQCI 191
+Q I
Sbjct: 466 VQKI 469
Score = 212 (79.7 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 71/261 (27%), Positives = 118/261 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ HS V L R L+TG D + +W I + GH+ + SV D
Sbjct: 335 IRRLSGHSDGVKTLYF---DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSV--D 389
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLK 126
S + ++ +G+A T+K+W +E ++ TL GH NC+ + HP S S DT ++
Sbjct: 390 SYQKVIVSGSADKTVKVWHVE-SRTCYTLRGHTEWVNCVKL--HPKSFSCFSCSDDTTIR 446
Query: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTV---KLWD---LTAGKLLHD 180
+WDIR C+ ++GH V I + V + DNT D +T G D
Sbjct: 447 MWDIRTNSCLKVFRGHVGQVQKI-IPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESD 505
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
+E + + P+ L + D T+K WD++T + I + GV + D
Sbjct: 506 TPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIA--ADNF 563
Query: 241 TLLCGLHE-SLKVFSWEPIRC 260
++ G H+ S+KV+ + +C
Sbjct: 564 RIISGSHDGSIKVWDLQSGKC 584
Score = 186 (70.5 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 58/247 (23%), Positives = 116/247 (46%)
Query: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTP 153
++ GH +++ F+ + F +GS D+ + IWD+ I GH+ GV + F
Sbjct: 295 IQEFKGHMDGVLTLQFN-YRLLF-TGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF-- 350
Query: 154 DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
D R +++G D T+++W+ G+ + ++ H + +D ++ ++ +GSAD+TVK W
Sbjct: 351 DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVD--SYQKVIVSGSADKTVKVWH 408
Query: 214 LETFELIGSAGPETSGVRCLTFNPDGRTLLC-GLHESLKVFSWEPIRCHDAVDVGWSRLS 272
+E+ G T V C+ +P ++ C + + W+ IR + + V
Sbjct: 409 VESRTCYTLRG-HTEWVNCVKLHP--KSFSCFSCSDDTTIRMWD-IRTNSCLKV------ 458
Query: 273 DLNVHEGKLLGCSYNQSCVGVWVVDISRI--EPYTIGSV-----TRVNGLSESKSSASGN 325
H G++ Q + + + D+ + + + GS T +G ES + ++
Sbjct: 459 -FRGHVGQV------QKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQ 511
Query: 326 LSVLNEN 332
+VL+EN
Sbjct: 512 ETVLDEN 518
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 45/173 (26%), Positives = 76/173 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSV---SFDSSE 71
H+ VNC+K+ KS + +D + +W I + + GH + + + E
Sbjct: 420 HTEWVNCVKLHPKSFSCF-SCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVE 478
Query: 72 VLVAAGAASGTIKLWD---LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
L + G+ D + A T + + + + P+ S LD +K+W
Sbjct: 479 NLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENI-PYPTHLLSCGLDNTIKLW 537
Query: 129 DIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDF 181
D++ CI T GH GV I D ++SG D ++K+WDL +GK +H F
Sbjct: 538 DVKTGKCIRTQFGHVEGVWDI--AADNFRIISGSHDGSIKVWDLQSGKCMHTF 588
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 55/218 (25%), Positives = 100/218 (45%)
Query: 83 IKLWDLEEAKIVRTLTGHRSNC-ISVDF-HPFGEFFASG-SLDTNLKIWDIRKKGC-IHT 138
+ L ++ A+I + TG SN I P+ + +++N W RK C I
Sbjct: 243 LPLLHMKRARIQQNSTGSSSNADIQTQTTRPWKVIYRERFKVESN---W--RKGHCRIQE 297
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
+KGH GV ++F + R + +G D+T+ +WDL GKL+ H ++ + F +
Sbjct: 298 FKGHMDGVLTLQF--NYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRK- 354
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG-LHESLKVFSWEP 257
L TGS D+T++ W+ T E I + + V L+ + + ++ G +++KV+ E
Sbjct: 355 -LITGSLDKTIRVWNYITGECISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWHVES 411
Query: 258 IRCHDAVD-VGWSRLSDLNVHEGKLLGCSYNQSCVGVW 294
C+ W L+ CS + + + +W
Sbjct: 412 RTCYTLRGHTEWVNCVKLHPKSFSCFSCS-DDTTIRMW 448
Score = 123 (48.4 bits), Expect = 0.00061, P = 0.00061
Identities = 61/230 (26%), Positives = 106/230 (46%)
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP 237
+ +FK H + + F+ LL TGS D T+ WDL T +LI + GV+ L F
Sbjct: 295 IQEFKGHMDGVLTLQFNYR--LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF-- 350
Query: 238 DGRTLLCG-LHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVV 296
D R L+ G L ++++V+++ C + ++ ++ ++ S +++ V VW V
Sbjct: 351 DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKVIVSGSADKT-VKVWHV 409
Query: 297 DISRIEPYTI-GSVTRVNGLS-ESKS----SASGNLSV----LNENSA-KASLGKLSVSQ 345
+ SR YT+ G VN + KS S S + ++ + NS K G + Q
Sbjct: 410 E-SRT-CYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQ 467
Query: 346 NSDPL-VKETKSLGRLSVSQNSDPLLKETKTLGRLSVSQNSEPAKESKVL 394
PL +K+ ++L + S S P T T G ++ P+ E + +
Sbjct: 468 KIIPLTIKDVENLATDNTSDGSSPQDDPTMTDG---ADESDTPSNEQETV 514
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 270 (100.1 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 273 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 330 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 385
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 386 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 444 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 471
Score = 252 (93.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 57/245 (23%), Positives = 116/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 239 NSKGVYCLQYDDDK---IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVI 293
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 294 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 351
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 352 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 409
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 410 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 464
Query: 252 VFSWE 256
+ W+
Sbjct: 465 IKVWD 469
Score = 242 (90.2 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 313 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 370 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 425
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 483
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 484 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 539
Score = 212 (79.7 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 223 WRCGRHNLQRIQCRSENSKGVYCLQYDDDKII--SGLRDNSIKIWDKSSLECLKVLTGHT 280
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 281 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 336
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 394
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 395 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 432
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 270 (100.1 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 273 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 330 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 385
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 386 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 444 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 471
Score = 252 (93.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ + +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 239 NSKGVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVI 293
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 294 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 351
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 352 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 409
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 410 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 464
Query: 252 VFSWE 256
+ W+
Sbjct: 465 IKVWD 469
Score = 242 (90.2 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 313 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 370 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 425
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 483
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 484 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 539
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 223 WRCGRHNLQRIQCRSENSKGVYCLQYDDEKII--SGLRDNSIKIWDKTSLECLKVLTGHT 280
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 281 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 336
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 394
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 395 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 432
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 270 (100.1 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 273 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS 329
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 330 NG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 385
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 386 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 443
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 444 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 471
Score = 252 (93.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 57/245 (23%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ + +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 239 NSKGVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVI 293
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 294 VTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASAT 351
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 352 DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 409
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 410 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 464
Query: 252 VFSWE 256
+ W+
Sbjct: 465 IKVWD 469
Score = 242 (90.2 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 70/240 (29%), Positives = 108/240 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ S+ ++VT +D + +W + I L GH + ++ V
Sbjct: 313 LNTLIHHNEAVLHLRF---SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVV 369
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 370 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 425
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 426 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 483
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPET-SGVRCLTF 235
L H G++ + F EF + + S D T+ WD + SA ET S R T+
Sbjct: 484 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDF--LNVPPSAQNETRSPSRTYTY 539
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + ++ LTGH
Sbjct: 223 WRCGRHNLQRIQCRSENSKGVYCLQYDDEKII--SGLRDNSIKIWDKTSLECLKVLTGHT 280
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF+ +G +V+
Sbjct: 281 GSVLCLQYDE--RVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS-NGL-MVTC 336
Query: 162 GEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 394
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 395 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 432
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 271 (100.5 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 85/300 (28%), Positives = 137/300 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK----PNAILSLSGHTSGIDS 64
L +F AH + + ++ R++ TGG D KV LW IGK P A+LS G ++GI+S
Sbjct: 311 LMKFEAHENESHAVRWS-PVERMVATGGADRKVKLWDIGKNSTEPRAVLS--GSSAGINS 367
Query: 65 VSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
V FDS+ + + ++W + + ++ TLTGH ++ + +GS D
Sbjct: 368 VDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTGSHDRT 427
Query: 125 LKIWDIRKKGCIHTYKGHTRGVNAIRFTPD-GRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
LKIWD+R CI T K N + T G ++SG D ++ WD+ K D
Sbjct: 428 LKIWDLRSIACIET-KFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEKQADDVLM 486
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRC----LTFNPDG 239
+I +D L D T+K DL ++I + E + C +FN G
Sbjct: 487 -PAKITSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFNSSG 545
Query: 240 RTLLCGLHESLKVFSWE-------PIRCHD-AVD-VGWSRLSDLNVHEGKLLGCS-YNQS 289
+ CG + ++ W ++ H AV+ V WS +++ GK C+ Y++S
Sbjct: 546 LKIACGSADGA-IYIWNVNGFLEATLKGHSTAVNAVSWSPNNNMLASVGKNKRCTIYSES 604
Score = 204 (76.9 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 53/208 (25%), Positives = 90/208 (43%)
Query: 64 SVSFDSSEVLVAAGAASGTIK----LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASG 119
S F + E+ + A+ T+K L KI+ H + +V + P A+G
Sbjct: 277 SARFTAGEIAENSRASIDTLKATGYLGQANPTKILMKFEAHENESHAVRWSPVERMVATG 336
Query: 120 SLDTNLKIWDIRKKGCIH--TYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKL 177
D +K+WDI K G + G+N++ F G +++ D ++W + +L
Sbjct: 337 GADRKVKLWDIGKNSTEPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRL 396
Query: 178 LHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNP 237
H H G++ + + TGS DRT+K WDL + I + +S +T +
Sbjct: 397 RHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDS 456
Query: 238 DGRTLLCGLHESLKVFSWEPIRCHDAVD 265
G T++ G H K+ W+ IR D
Sbjct: 457 LGSTIISG-HYDKKIRFWD-IRTEKQAD 482
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 264 (98.0 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 61/212 (28%), Positives = 100/212 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + SGH + F
Sbjct: 61 FSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHDS 120
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
V VA G SG IK+W ++ + + + +++HP +G+ D N +W I
Sbjct: 121 VFVATGDMSGLIKVWRVDTKE--EAWSFEVGDLEWMEWHPQAHVLLAGTADGNSWMWKIP 178
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ---I 188
C T++G + PDG+ V G ED T+++WDL G LH K +G +
Sbjct: 179 SGDC-KTFQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPL 237
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
C+ + L+ TGS D K + T +++
Sbjct: 238 TCVASNQDGSLILTGSVDCHAKLVNSATGKVV 269
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 59/265 (22%), Positives = 115/265 (43%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFA-SGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
+++++ +L C+S+D P A +G D +W + + GH V
Sbjct: 55 DDSEVTFSLHSASVFCVSLD--PKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVT 112
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
F+ D +V +G +K+W + + F+ G ++ +++HP +L G+AD
Sbjct: 113 CAGFSHDSVFVATGDMSGLIKVWRVDTKEEAWSFEV--GDLEWMEWHPQAHVLLAGTADG 170
Query: 208 TVKFW-----DLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCH 261
W D +TF+ G A P T G + L PDG+ + G + ++++ W+ ++
Sbjct: 171 NSWMWKIPSGDCKTFQ--GPACPATCG-KIL---PDGKRAVVGYEDGTMRI--WD-LKQG 221
Query: 262 DAVDVGWSRLSDLNVHEGKLLGCSYNQ--SCVGVWVVDI-SRIEPYTIGSVTRVNGLSES 318
++ V L + H+ L + NQ S + VD +++ G V V + +
Sbjct: 222 TSLHV----LKGQDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESA 277
Query: 319 KSSASGNLSVLNENSAKASLGKLSV 343
A + E+++ SLG +V
Sbjct: 278 APKAPASEGEEAESNSVESLGFCNV 302
>ASPGD|ASPL0000034848 [details] [associations]
symbol:AN2861 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 SUPFAM:SSF81383 EMBL:AACD01000051 KO:K03362
RefSeq:XP_660465.1 ProteinModelPortal:Q5B9B9
EnsemblFungi:CADANIAT00010229 GeneID:2874563 KEGG:ani:AN2861.2
HOGENOM:HOG000198049 OMA:YHSASIL OrthoDB:EOG4X6GHM Uniprot:Q5B9B9
Length = 656
Score = 271 (100.5 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 69/240 (28%), Positives = 114/240 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP-NAILSLSGHTSGIDSVSFDSSEVL 73
HS+++ CL+ ++VTG DH +W I I L GHT+G+ V FD ++
Sbjct: 410 HSASILCLQF---DDEIMVTGSSDHTCIIWDIKNDYKPIRRLEGHTAGVLDVCFDHRYIV 466
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
+ TI +WD +V+ L GHR +V G+ S S D K+W+I
Sbjct: 467 SCS--KDNTICVWDRRSGALVKKLYGHRGPVNAVQLR--GDLIVSASGDGVAKLWNITSG 522
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
C+ + RG+ + F+ D R V++GG D + +D G+L+ + + H G ++ +
Sbjct: 523 LCVKEFSSRDRGLACVEFSNDARTVLTGGNDRAIYQFDANTGQLVKEIEGHTGLVRSLHL 582
Query: 194 HPHEFLLATGSADRTVKFWDLETFEL-IGSAGPETSGVRCLTFNPDGRTLLCGLHESLKV 252
+ +GS D +VK +D + EL I G TS + L+ D R ++ +S V
Sbjct: 583 DDVNQRIVSGSYDTSVKVFDAQAGELSIDFPGWTTSWM--LSVKSDYRRIVATSQDSRAV 640
Score = 210 (79.0 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 61/238 (25%), Positives = 103/238 (43%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSG--IDSVSFDSSEV 72
H+ +V C + ++TG D + +W P A + G G +++ F E
Sbjct: 322 HTDSVYCAQFDEDK---IITGSRDRTIRVWDARYPWACRKIIGPAPGGVLNNGPFHDPEQ 378
Query: 73 LVAAGAASGTIKLWDLEEAKIV----RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ TI+ A+IV + H ++ + + F E +GS D IW
Sbjct: 379 QALGSSPLLTIRPPPASPAEIVSLHEKPSNYHSASILCLQFDD--EIMVTGSSDHTCIIW 436
Query: 129 DIRKK-GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ 187
DI+ I +GHT GV + F D R++VS +DNT+ +WD +G L+ H G
Sbjct: 437 DIKNDYKPIRRLEGHTAGVLDVCF--DHRYIVSCSKDNTICVWDRRSGALVKKLYGHRGP 494
Query: 188 IQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCG 245
+ + L+ + S D K W++ + + G+ C+ F+ D RT+L G
Sbjct: 495 VNAVQLRGD--LIVSASGDGVAKLWNITSGLCVKEFSSRDRGLACVEFSNDARTVLTG 550
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 271 (100.5 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 71/255 (27%), Positives = 114/255 (44%)
Query: 14 AHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVL 73
AH S V + I + +V+G + + W N + + S I +SF +++
Sbjct: 165 AHDSAVRSI-IWSHNEDWMVSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLK 223
Query: 74 VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
+A+ A IK+WD L GH + V +HP SG D N+KIWD +
Sbjct: 224 LASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSS 283
Query: 134 GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDF 193
I T GH V+ + + +G W+VS D +K++D+ K + FK H ++ +
Sbjct: 284 QNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALAL 343
Query: 194 HP-HEFLLATGSADRTVKFWDL---ETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES 249
HP HE L +G D + +W + E I SA + V L+++P G L G ++
Sbjct: 344 HPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSA--HDADVWSLSWHPIGHILASGSNDH 401
Query: 250 LKVFSWEPIRCHDAV 264
F W R D +
Sbjct: 402 TTKF-WSRNRPADTM 415
Score = 180 (68.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 62 IDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
I+ VS+ + G++SG LW+ L H S S+ + ++ SG
Sbjct: 128 INCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDD 187
Query: 122 DTNLKIWDIRKKGCIHTYKGHTRG-VNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD 180
N+K W + +K H + + + F+P + S +D +K+WD +
Sbjct: 188 SGNIKYWQPNMNN-VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQ 246
Query: 181 FKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR 240
H ++C+ +HP + L+ +G D +K WD ++ + I + S V + +N +G
Sbjct: 247 LVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGN 306
Query: 241 TLLCGLHESL-KVF 253
++ + L KVF
Sbjct: 307 WIVSASSDQLLKVF 320
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 248 (92.4 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 71/302 (23%), Positives = 127/302 (42%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAI-GKPNA----ILSLSGHTSGIDSVSFDS 69
H+ V L +L++ D + W + G + S GH+ + + +
Sbjct: 16 HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA 75
Query: 70 SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWD 129
+ + T++LWD+ + + GH+S+ +SVD SGS D +K+W
Sbjct: 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135
Query: 130 IRKKGCIHTYKGHTRGVNAIRFTP------DGRWVVSGGEDNTVKLWDLTAGKLLHDFKC 183
I+ + C+ T GH V+ +R P D ++S G D VK W+L ++ DF
Sbjct: 136 IKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194
Query: 184 HEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLL 243
H I + P L+A+ D + W+L + + + + V L F+P+ L
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLA 253
Query: 244 CGLHESLKVFSWEPIRCHDAVD---VGWSRLSDLNV------HEGKLLGCSYNQSCVGVW 294
+KVFS +P D + G+S+ ++ + +G+ L Y + + VW
Sbjct: 254 AATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313
Query: 295 VV 296
V
Sbjct: 314 QV 315
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 10 QEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSF-- 67
Q FV H S V + I +K+S ++++G D + +W I K + +L GH + V
Sbjct: 101 QRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTI-KGQCLATLLGHNDWVSQVRVVP 158
Query: 68 -----DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
D S +++AG +K W+L + +I GH SN ++ P G AS D
Sbjct: 159 NEKADDDSVTIISAGNDK-MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKD 217
Query: 123 TNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFK 182
+ +W++ K ++T V ++ F+P+ W+ + +K++ L L+ D +
Sbjct: 218 GEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLR 275
Query: 183 CH-EGQIQCIDFHPHEFLLATGSADRTVKF 211
G + + PH LA SAD F
Sbjct: 276 PEFAGYSKAAE--PHAVSLAW-SADGQTLF 302
Score = 155 (59.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 90 EAKIVR-TLTGHRSNCISVDFHPFGE--FFASGSLDTNLKIW----DIRKKGC-IHTYKG 141
E ++R TL GH S+ G+ S S D L W D +K G + ++KG
Sbjct: 5 EVLVLRGTLEGHNGWVTSLATSA-GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG 63
Query: 142 HTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLA 201
H+ V T DG + +S D T++LWD+ G+ F H+ + +D ++
Sbjct: 64 HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMII 123
Query: 202 TGSADRTVKFWDLE 215
+GS D+T+K W ++
Sbjct: 124 SGSRDKTIKVWTIK 137
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 264 (98.0 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 61/212 (28%), Positives = 100/212 (47%)
Query: 12 FVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE 71
F HS++V C+ + K++ + VTGGED K +W + + SGH + F
Sbjct: 64 FSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHDS 123
Query: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
V VA G SG IK+W ++ + + + +++HP +G+ D N +W I
Sbjct: 124 VFVATGDMSGLIKVWRVDTKE--EAWSFEVGDLEWMEWHPQAHVLLAGTADGNSWMWKIP 181
Query: 132 KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQ---I 188
C T++G + PDG+ V G ED T+++WDL G LH K +G +
Sbjct: 182 SGDC-KTFQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPL 240
Query: 189 QCIDFHPHEFLLATGSADRTVKFWDLETFELI 220
C+ + L+ TGS D K + T +++
Sbjct: 241 TCVASNQDGSLILTGSVDCHAKLVNSATGKVV 272
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 59/265 (22%), Positives = 115/265 (43%)
Query: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFA-SGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
+++++ +L C+S+D P A +G D +W + + GH V
Sbjct: 58 DDSEVTFSLHSASVFCVSLD--PKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVT 115
Query: 148 AIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADR 207
F+ D +V +G +K+W + + F+ G ++ +++HP +L G+AD
Sbjct: 116 CAGFSHDSVFVATGDMSGLIKVWRVDTKEEAWSFEV--GDLEWMEWHPQAHVLLAGTADG 173
Query: 208 TVKFW-----DLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHE-SLKVFSWEPIRCH 261
W D +TF+ G A P T G + L PDG+ + G + ++++ W+ ++
Sbjct: 174 NSWMWKIPSGDCKTFQ--GPACPATCG-KIL---PDGKRAVVGYEDGTMRI--WD-LKQG 224
Query: 262 DAVDVGWSRLSDLNVHEGKLLGCSYNQ--SCVGVWVVDI-SRIEPYTIGSVTRVNGLSES 318
++ V L + H+ L + NQ S + VD +++ G V V + +
Sbjct: 225 TSLHV----LKGQDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESA 280
Query: 319 KSSASGNLSVLNENSAKASLGKLSV 343
A + E+++ SLG +V
Sbjct: 281 APKAPASEGEEAESNSVESLGFCNV 305
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 271 (100.5 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 62/206 (30%), Positives = 96/206 (46%)
Query: 54 SLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
SL GHT + +F L+ + + TI+LW L V T GH V F P G
Sbjct: 445 SLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHG 504
Query: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLT 173
+F S S D ++W + + GH V+ ++F P+ +V +G D TV+LWD
Sbjct: 505 YYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 174 AGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCL 233
G+ + H+G + + F LA+GS D + WDL L+ + TS V +
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTI 624
Query: 234 TFNPDGRTLLC-GLHESLKVFSWEPI 258
TF+ DG L GL +L ++ + +
Sbjct: 625 TFSRDGTVLAAAGLDNNLTLWDFHKV 650
Score = 267 (99.0 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 66/238 (27%), Positives = 110/238 (46%)
Query: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGA 78
V C +I S+ +L G D V +W++ P + +L S + + +S+++
Sbjct: 380 VTCAEISDDST-MLACGFGDSSVRIWSL-TPAKLRTLKDADS-LRELDKESADI------ 430
Query: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHT 138
+++ D ++ R+L GH F P S S D+ +++W + C+ T
Sbjct: 431 ---NVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVT 487
Query: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEF 198
Y+GH V +RF P G + VS D T +LW + + L F H + C+ FHP+
Sbjct: 488 YRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSN 547
Query: 199 LLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWE 256
+ATGS+DRTV+ WD T + + V L F+ GR L G + + W+
Sbjct: 548 YVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDH-NIIIWD 604
Score = 246 (91.7 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 51/144 (35%), Positives = 74/144 (51%)
Query: 38 DHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTL 97
D LWA A+ GH S +D V F + VA G++ T++LWD + VR +
Sbjct: 513 DKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLM 572
Query: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRW 157
TGH+ + S+ F G + ASGS+D N+ IWD+ + T HT V I F+ DG
Sbjct: 573 TGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTV 632
Query: 158 VVSGGEDNTVKLWDLTAGKLLHDF 181
+ + G DN + LWD K+ D+
Sbjct: 633 LAAAGLDNNLTLWDFH--KVTEDY 654
Score = 192 (72.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 39/124 (31%), Positives = 62/124 (50%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ FV H S V+C++ +S + TG D V LW ++ ++GH + S++F
Sbjct: 527 LRVFVGHLSDVDCVQF-HPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFS 585
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
+ +A+G+ I +WDL +V TL H S ++ F G A+ LD NL +W
Sbjct: 586 ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Query: 129 DIRK 132
D K
Sbjct: 646 DFHK 649
Score = 173 (66.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 48/199 (24%), Positives = 86/199 (43%)
Query: 49 PNAILS--LSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS 106
P+A+ L+ H G+ ++A G ++++W L AK+ RTL
Sbjct: 366 PSAVFYTVLNSH-QGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKL-RTLK-------- 415
Query: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNT 166
D E S D N+++ D R + GHT V F P+ ++S ED+T
Sbjct: 416 -DADSLRELDKE-SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDST 473
Query: 167 VKLWDLTAGKLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPE 226
++LW L + ++ H + + F PH + + S D+T + W ++ + +
Sbjct: 474 IRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGH 533
Query: 227 TSGVRCLTFNPDGRTLLCG 245
S V C+ F+P+ + G
Sbjct: 534 LSDVDCVQFHPNSNYVATG 552
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 268 (99.4 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 63/210 (30%), Positives = 102/210 (48%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
L+ H+ +V CL+ RV+VTG D V +W + + +L H + + F
Sbjct: 258 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC 314
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIV---RTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
+ L+ + +I +WD+ A + R L GHR+ VDF ++ S S D +
Sbjct: 315 NG--LMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTI 370
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHE 185
K+W + T GH RG+ +++ R VVSG DNT++LWD+ G L + HE
Sbjct: 371 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 428
Query: 186 GQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
++CI F + +G+ D +K WDL+
Sbjct: 429 ELVRCIRFDNKR--IVSGAYDGKIKVWDLQ 456
Score = 251 (93.4 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 57/245 (23%), Positives = 116/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ +++G D+ + +W + L+GHT + + +D E ++
Sbjct: 224 NSKGVYCLQYDDDK---IISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYD--ERVI 278
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
G++ T+++WD+ +++ TL H + + F + S D ++ +WD+
Sbjct: 279 VTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRF--CNGLMVTCSKDRSIAVWDMASAT 336
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D +++VS D T+K+W + + + H+ I C+
Sbjct: 337 DISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 394
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+E + VRC+ F D + ++ G ++ K
Sbjct: 395 QYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-K 449
Query: 252 VFSWE 256
+ W+
Sbjct: 450 IKVWD 454
Score = 235 (87.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 62/217 (28%), Positives = 98/217 (45%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSV 65
L + H+ V L+ + ++VT +D + +W + I L GH + ++ V
Sbjct: 298 LNTLIHHNEAVLHLRF---CNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVV 354
Query: 66 SFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
FD ++ A+G TIK+W + VRTL GH+ + + SGS D +
Sbjct: 355 DFDDKYIVSASG--DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTI 410
Query: 126 KIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGK--------- 176
++WDI C+ +GH V IRF D + +VSG D +K+WDL A
Sbjct: 411 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL 468
Query: 177 LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWD 213
L H G++ + F EF + + S D T+ WD
Sbjct: 469 CLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWD 503
Score = 213 (80.0 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 52/222 (23%), Positives = 105/222 (47%)
Query: 44 WAIGKPNA--ILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
W G+ N I S ++ G+ + +D +++ +G +IK+WD + + ++ LTGH
Sbjct: 208 WRCGRHNLQRIQCRSENSKGVYCLQYDDDKII--SGLRDNSIKIWDKQSLECLKVLTGHT 265
Query: 102 SNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSG 161
+ + + + +GS D+ +++WD+ ++T H V +RF +G +V+
Sbjct: 266 GSVLCLQYDE--RVIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC-NGL-MVTC 321
Query: 162 GEDNTVKLWDLTAG---KLLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFE 218
+D ++ +WD+ + L H + +DF + A+G DRT+K W T E
Sbjct: 322 SKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWSTSTCE 379
Query: 219 LIGSAGPETSGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRC 260
+ + G+ CL + R ++ G ++ + W+ I C
Sbjct: 380 FVRTLNGHKRGIACLQYRD--RLVVSGSSDNT-IRLWD-IEC 417
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 270 (100.1 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 64/216 (29%), Positives = 111/216 (51%)
Query: 4 KRAYKLQEFVA-HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGI 62
++ Y ++ H+ +V CL+ +RV+++G D V +W + I +L H +
Sbjct: 249 RKDYSCSRILSGHTGSVLCLQY---DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAV 305
Query: 63 DSVSFDSSEVLVAAGAASGTIKLWDL---EEAKIVRTLTGHRSNCISVDFHPFGEFFASG 119
+ F ++ ++V + +I +WD+ + I R L GHR+ VDF + S
Sbjct: 306 LHLRF-ANGIMVTC-SKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDD--RYIVSA 361
Query: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH 179
S D +K+W + + T GH RG+ +++ GR VVSG DNT++LWD+ +G L
Sbjct: 362 SGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLR 419
Query: 180 DFKCHEGQIQCIDFHPHEFLLATGSADRTVKFWDLE 215
+ HE ++CI F E + +G+ D +K WDL+
Sbjct: 420 VLEGHEELVRCIRFD--EKRIVSGAYDGKIKVWDLQ 453
Score = 257 (95.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 62/200 (31%), Positives = 99/200 (49%)
Query: 26 RKSSRVLVTGGEDHKVNLWAIGKPNAILS---LSGHTSGIDSVSFDSSEVLVAAGAASGT 82
R ++ ++VT +D + +W + P I L GH + ++ V FD ++ A+G T
Sbjct: 309 RFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASG--DRT 366
Query: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
IK+W ++ + VRTL GHR + + G SGS D +++WDI C+ +GH
Sbjct: 367 IKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGH 424
Query: 143 TRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAG---KLLHDFKC------HEGQIQCIDF 193
V IRF D + +VSG D +K+WDL A + L C H G++ + F
Sbjct: 425 EELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF 482
Query: 194 HPHEFLLATGSADRTVKFWD 213
+F + + S D T+ WD
Sbjct: 483 D--DFQIVSSSHDDTILIWD 500
Score = 240 (89.5 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 59/245 (24%), Positives = 117/245 (47%)
Query: 15 HSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLV 74
+S V CL+ +V+G D+ + +W + LSGHT + + +D+ ++
Sbjct: 221 NSKGVYCLQYDDDK---IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVII- 276
Query: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
+G++ T+++WD+E + ++TL H + + F + S D ++ +WD+
Sbjct: 277 -SGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPR 333
Query: 135 CIHTYK---GHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCI 191
I + GH VN + F D R++VS D T+K+W + + + H I C+
Sbjct: 334 DITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACL 391
Query: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHESLK 251
+ L+ +GS+D T++ WD+ + + VRC+ F D + ++ G ++ K
Sbjct: 392 QYRGR--LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYDG-K 446
Query: 252 VFSWE 256
+ W+
Sbjct: 447 IKVWD 451
Score = 231 (86.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 62/277 (22%), Positives = 130/277 (46%)
Query: 39 HKV-NLWAIG--KPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVR 95
H + N W G K I S ++ G+ + +D +++ +G TIK+WD ++ R
Sbjct: 199 HNIDNNWKRGNYKMTRINCQSENSKGVYCLQYDDDKIV--SGLRDNTIKIWDRKDYSCSR 256
Query: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDG 155
L+GH + + + + SGS D +++WD+ CI T H V +RF +G
Sbjct: 257 ILSGHTGSVLCLQYD--NRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA-NG 313
Query: 156 RWVVSGGEDNTVKLWDLTAGK---LLHDFKCHEGQIQCIDFHPHEFLLATGSADRTVKFW 212
+V+ +D ++ +WD+ + + + H + +DF + A+G DRT+K W
Sbjct: 314 I-MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASG--DRTIKVW 370
Query: 213 DLETFELIGSAGPETSGVRCLTFNPDGRTLLCGLHES-LKVFSWEPIRCHDAVDVGWSRL 271
++T E + + G+ CL + GR ++ G ++ ++++ C ++ +
Sbjct: 371 SMDTLEFVRTLAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELV 428
Query: 272 SDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYTIGS 308
+ E +++ +Y+ + VW + + ++P + S
Sbjct: 429 RCIRFDEKRIVSGAYDGK-IKVWDLQAA-LDPRALSS 463
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/170 (27%), Positives = 80/170 (47%)
Query: 13 VAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEV 72
V H + VN + R +V+ D + +W++ + +L+GH GI + +
Sbjct: 342 VGHRAAVNVVDF---DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR-- 396
Query: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDI 130
LV +G++ TI+LWD+ +R L GH CI D + SG+ D +K+WD+
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD----EKRIVSGAYDGKIKVWDL 452
Query: 131 R---------KKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWD 171
+ + C+ + HT V ++F D +VS D+T+ +WD
Sbjct: 453 QAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWD 500
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 37/128 (28%), Positives = 57/128 (44%)
Query: 9 LQEFVAHSSTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFD 68
++ H + CL+ R++V+G D+ + LW I + L GH + + FD
Sbjct: 378 VRTLAGHRRGIACLQY---RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD 434
Query: 69 SSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVD-----FH-PFGEF-FASGSL 121
++ +GA G IK+WDL+ A R L+ C V F F +F S S
Sbjct: 435 EKRIV--SGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSH 492
Query: 122 DTNLKIWD 129
D + IWD
Sbjct: 493 DDTILIWD 500
Score = 37 (18.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 47 GKPNAILSLSGHTSGIDSV 65
GKP +I L GH I+ V
Sbjct: 26 GKPLSIDYLQGHEGLIEEV 44
WARNING: HSPs involving 1669 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.129 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 819 797 0.00097 121 3 11 23 0.44 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1919
No. of states in DFA: 623 (66 KB)
Total size of DFA: 391 KB (2190 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.77u 0.13s 77.90t Elapsed: 00:00:04
Total cpu time: 77.89u 0.13s 78.02t Elapsed: 00:00:04
Start: Tue May 21 08:02:29 2013 End: Tue May 21 08:02:33 2013
WARNINGS ISSUED: 2