Your job contains 1 sequence.
>003450
MSSLVERLRVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGES
ENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPLNDIDKILDCEMRPTVAGDSDV
SKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA
EEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFI
KIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFS
WSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWAPQMN
VVMYVGTSQARNIIREYEFYFPKNPKKVKKKKSGQVVSESKQDRIKFDVLLTSYEMINLD
SASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHF
LDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVEL
SSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESF
KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG
AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR
LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQVTIFFQTWRLLSC
SVEGILELVFLWTRSWKNDVWVCDAVERARKLTISKEIG
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003450
(819 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040184 - symbol:PKL "PICKLE" species:3702 "Ar... 3179 0. 1
TAIR|locus:2116747 - symbol:PKR2 "PICKLE RELATED 2" speci... 1396 2.7e-239 3
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 1484 6.4e-173 3
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 1493 6.0e-172 2
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 1493 6.0e-172 2
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 1493 6.0e-172 2
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 1492 1.6e-171 2
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 1495 5.4e-171 2
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 1495 5.4e-171 2
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 1489 6.9e-171 2
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 1492 8.8e-171 2
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 1492 1.1e-170 2
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 1484 1.4e-170 2
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 1484 1.4e-170 2
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 1484 1.4e-170 2
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 1484 1.4e-170 2
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 1484 1.4e-170 2
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 1484 1.4e-170 2
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 1484 1.4e-170 2
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 1484 1.4e-170 2
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 1489 2.3e-170 2
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 1492 3.0e-170 2
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 1490 4.8e-170 2
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 1489 6.1e-170 2
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 1487 2.1e-169 2
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 1460 3.2e-169 3
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 1383 1.4e-168 3
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 1383 1.4e-168 3
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 1339 2.9e-168 4
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 1454 1.1e-166 3
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 1450 4.5e-165 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 1594 9.0e-164 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 1380 7.7e-159 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 1378 3.3e-158 2
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 1366 1.1e-157 2
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 1366 1.1e-157 2
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA... 1433 1.0e-146 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 1272 3.2e-146 2
DICTYBASE|DDB_G0284171 - symbol:DDB_G0284171 "CHR group p... 1328 2.9e-145 3
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"... 1376 3.4e-143 2
FB|FBgn0086902 - symbol:kis "kismet" species:7227 "Drosop... 1375 6.0e-140 3
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 1335 2.5e-136 1
MGI|MGI:88393 - symbol:Chd1 "chromodomain helicase DNA bi... 1308 3.2e-136 2
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 1335 3.3e-135 1
ZFIN|ZDB-GENE-030131-6320 - symbol:chd8 "chromodomain hel... 1325 4.7e-135 2
FB|FBgn0250786 - symbol:Chd1 "Chromodomain-helicase-DNA-b... 1325 7.4e-135 1
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 1335 9.1e-135 1
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 1326 2.5e-134 2
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 1327 2.7e-134 2
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 1327 2.7e-134 2
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 1326 3.5e-134 2
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 1322 9.2e-134 2
POMBASE|SPAC3G6.01 - symbol:hrp3 "ATP-dependent DNA helic... 1305 3.8e-133 1
SGD|S000000966 - symbol:CHD1 "Chromatin remodeler that re... 1282 1.6e-132 2
RGD|1594200 - symbol:LOC680231 "similar to chromodomain h... 1313 1.8e-132 1
MGI|MGI:1924001 - symbol:Chd9 "chromodomain helicase DNA ... 1311 2.9e-132 1
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 1306 3.7e-132 1
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 1290 1.5e-131 1
DICTYBASE|DDB_G0280705 - symbol:DDB_G0280705 "CHR group p... 1280 1.0e-130 2
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 1292 1.2e-130 1
UNIPROTKB|Q9HCK8 - symbol:CHD8 "Chromodomain-helicase-DNA... 1292 2.3e-130 1
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 1292 2.3e-130 1
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 1289 4.7e-130 1
UNIPROTKB|Q3L8U1 - symbol:CHD9 "Chromodomain-helicase-DNA... 1290 5.1e-130 1
UNIPROTKB|E1BDZ3 - symbol:CHD9 "Uncharacterized protein" ... 1289 6.5e-130 1
UNIPROTKB|E2RDK8 - symbol:CHD9 "Uncharacterized protein" ... 1286 1.4e-129 1
ZFIN|ZDB-GENE-030131-497 - symbol:chd9 "chromodomain heli... 1286 1.4e-129 1
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 1283 1.9e-129 1
UNIPROTKB|F1S8J5 - symbol:CHD8 "Uncharacterized protein" ... 1283 2.0e-129 1
UNIPROTKB|E2QUS7 - symbol:CHD8 "Uncharacterized protein" ... 1283 2.1e-129 1
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ... 1232 1.6e-128 2
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 1261 1.7e-128 1
UNIPROTKB|F1NLW6 - symbol:CHD6 "Uncharacterized protein" ... 1261 1.5e-127 1
UNIPROTKB|F1NLV5 - symbol:CHD6 "Uncharacterized protein" ... 1261 1.6e-127 1
UNIPROTKB|F1PTH3 - symbol:CHD6 "Uncharacterized protein" ... 1260 6.7e-127 1
UNIPROTKB|J9P0F6 - symbol:CHD6 "Uncharacterized protein" ... 1260 6.7e-127 1
UNIPROTKB|Q8TD26 - symbol:CHD6 "Chromodomain-helicase-DNA... 1260 6.7e-127 1
UNIPROTKB|F1N734 - symbol:CHD6 "Uncharacterized protein" ... 1257 1.4e-126 1
RGD|1306794 - symbol:Chd1 "chromodomain helicase DNA bind... 1208 1.2e-125 2
UNIPROTKB|F1N8K8 - symbol:CHD1 "Chromodomain-helicase-DNA... 870 1.7e-125 3
WB|WBGene00007053 - symbol:chd-7 species:6239 "Caenorhabd... 1246 2.6e-125 1
UNIPROTKB|F1NP27 - symbol:CHD1 "Chromodomain-helicase-DNA... 865 5.9e-125 3
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 732 3.7e-123 3
UNIPROTKB|E1BS48 - symbol:CHD9 "Uncharacterized protein" ... 1173 9.5e-122 2
UNIPROTKB|F1RT88 - symbol:CHD7 "Uncharacterized protein" ... 1165 1.1e-121 2
ASPGD|ASPL0000048785 - symbol:AN1956 species:162425 "Emer... 1141 6.6e-121 2
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 1170 7.7e-119 1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer... 1144 7.6e-118 2
DICTYBASE|DDB_G0293012 - symbol:DDB_G0293012 "CHR group p... 1164 7.0e-117 2
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA... 1127 1.3e-115 2
UNIPROTKB|J9NSS6 - symbol:CHD2 "Uncharacterized protein" ... 1139 1.5e-115 1
UNIPROTKB|O14646 - symbol:CHD1 "Chromodomain-helicase-DNA... 1121 3.5e-115 2
UNIPROTKB|E2QUI5 - symbol:CHD1 "Uncharacterized protein" ... 1118 7.7e-115 2
POMBASE|SPAC1783.05 - symbol:hrp1 "ATP-dependent DNA heli... 1132 8.2e-115 1
UNIPROTKB|D4AD08 - symbol:Chd2 "Chromodomain helicase DNA... 1140 1.0e-114 1
ZFIN|ZDB-GENE-050419-256 - symbol:chd2 "chromodomain heli... 1104 1.1e-114 3
UNIPROTKB|J9PA90 - symbol:CHD2 "Uncharacterized protein" ... 1139 1.3e-114 1
UNIPROTKB|I3LRQ2 - symbol:CHD2 "Uncharacterized protein" ... 1130 1.3e-114 1
UNIPROTKB|J9P6Y8 - symbol:CHD1 "Uncharacterized protein" ... 1118 1.4e-114 2
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ... 1120 1.8e-114 2
WARNING: Descriptions of 626 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 3179 (1124.1 bits), Expect = 0., P = 0.
Identities = 610/767 (79%), Positives = 667/767 (86%)
Query: 1 MSSLVERLRVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGES 60
MSSLVERLR+RSDRKP+Y LD+SDDD DF K T E+ E IVR DAK+++CQACGES
Sbjct: 1 MSSLVERLRIRSDRKPVYNLDDSDDD-DFVP-KKDRTFEQVEAIVRTDAKENACQACGES 58
Query: 61 ENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPLNDIDKILDCEMRPTVAGDSDV 120
NL+SC+TCTYA+HAKCLVPPLK +WRCPECVSPLN+IDKILDCEMRPT + +
Sbjct: 59 TNLVSCNTCTYAFHAKCLVPPLKDASVENWRCPECVSPLNEIDKILDCEMRPTKSSEQGS 118
Query: 121 SKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA 180
S K IFVKQYLVKWKGLSYLHC+WVPEKEF KA+KSN RL+T+VNNFHRQM S NN+
Sbjct: 119 SDAEPKPIFVKQYLVKWKGLSYLHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQMESFNNS 178
Query: 181 EEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFI 240
E+DFVAIRPEWTTVDRILACR ED E EYLVKYKELSYDECYWE ESDIS FQ EI+RF
Sbjct: 179 EDDFVAIRPEWTTVDRILACREEDGELEYLVKYKELSYDECYWESESDISTFQNEIQRFK 238
Query: 241 KIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFS 300
+ SR+ RS +DV + + P++FQQ++H+PEFL G LHPYQLEGLNFLRFS
Sbjct: 239 DVNSRTRRS---------KDV-DHKRNPRDFQQFDHTPEFLKG-LLHPYQLEGLNFLRFS 287
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWAPQMN 360
WSKQTHVILADEMGLGKTIQSIA LASLF E + PHLV+APLSTLRNWEREFATWAPQMN
Sbjct: 288 WSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWAPQMN 347
Query: 361 VVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLD 420
VVMY GT+QAR +IRE+EFY Q RIKFDVLLTSYEMINLD
Sbjct: 348 VVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLD 407
Query: 421 SASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHF 480
SA LKPIKW+CMIVDEGHRLKNKDSKLFSSL QYS+ HR+LLTGTPLQNNLDELFMLMHF
Sbjct: 408 SAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHF 467
Query: 481 LDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVEL 540
LDAGKFGSLEEFQEEFKDINQEEQISRLH+MLAPHLLRRVKKDVMK++PPKKELILRV+L
Sbjct: 468 LDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDL 527
Query: 541 SSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESF 600
SS QKEYYKAI TRNYQ+LT++GGAQISL N++MELRK+CCHPYMLEGVEP I D NE+F
Sbjct: 528 SSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAF 587
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
KQLLES GKLQLLDKMMVKLKEQGHRVLIY+QFQHMLDLLEDY T KKWQYERIDGKVGG
Sbjct: 588 KQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGG 647
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
AERQIRIDRFNAKNS++FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR
Sbjct: 648 AERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 707
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQ 767
LGQTNKVMI+RLI RG+IEERMMQ+TKKKMVLEHLVVG+LK QNINQ
Sbjct: 708 LGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNINQ 754
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 1396 (496.5 bits), Expect = 2.7e-239, Sum P(3) = 2.7e-239
Identities = 265/355 (74%), Positives = 315/355 (88%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
KFDVLLT+YEM++ + L PIKW CMI+DEGHRLKN+ SKL+SSL Q++++H VLLTGT
Sbjct: 327 KFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGT 386
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVM 525
PLQNNL+ELF LMHFLDA KFGSLE+FQ DIN+EEQISRLH+MLAPHLLRR+KKDV+
Sbjct: 387 PLQNNLNELFALMHFLDADKFGSLEKFQ----DINKEEQISRLHQMLAPHLLRRLKKDVL 442
Query: 526 KE-LPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPY 584
K+ +PPKKELILRV++SS+QKE YKA++T NYQ+LT++ A+IS NV+M+LR++C HPY
Sbjct: 443 KDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKIS--NVLMKLRQVCSHPY 500
Query: 585 MLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYL 644
+L EP ED NE+F +LLE+SGKLQLLDKMMVKLKEQGHRVLIY+QFQH L LLEDY
Sbjct: 501 LLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYF 560
Query: 645 TFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDS 704
TFK W YERIDGK+ G ERQ+RIDRFNA+NS+RFCFLLSTRAGG+GINLATADTVIIYDS
Sbjct: 561 TFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDS 620
Query: 705 DWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGR 759
DWNPHADLQAMAR HRLGQTNKVMI+RLI +G++EERMM++TK KM+LEHLVVG+
Sbjct: 621 DWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGK 675
Score = 899 (321.5 bits), Expect = 2.7e-239, Sum P(3) = 2.7e-239
Identities = 183/290 (63%), Positives = 219/290 (75%)
Query: 98 PLNDIDKILDCEMRPTVAGDSDVSKLGSKQ-IFVKQYLVKWKGLSYLHCTWVPEKEFLKA 156
PL +I+KILD E RPT + + + S G+ + VKQYLVKWKGLSYLHC+WVPE+EF KA
Sbjct: 43 PLGEIEKILDREWRPTASNNPNSSDNGTPTLVVVKQYLVKWKGLSYLHCSWVPEQEFEKA 102
Query: 157 FKSNPRLRTK--VNNFHRQMS---SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLV 211
+KS+P L+ K V F+ M + N A E F+AIRPEW TVDRI+ACR DD +EYLV
Sbjct: 103 YKSHPHLKLKLRVTRFNAAMDVFIAENGAHE-FIAIRPEWKTVDRIIACREGDDGEEYLV 161
Query: 212 KYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEF 271
KYKELSY YWE ESDIS FQ EI+RF I S S R E+ + +EF
Sbjct: 162 KYKELSYRNSYWESESDISDFQNEIQRFKDINSSSRRDK----------YVENERNREEF 211
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE 331
+Q++ +PEFL+G +LH YQLEGLNFLR+SWSK+T+VILADEMGLGKTIQSIAFLASLF E
Sbjct: 212 KQFDLTPEFLTG-TLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE 270
Query: 332 RISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYF 381
+SPHLVVAPLST+RNWEREFATWAP MNVVMY G S+AR++I E+EFYF
Sbjct: 271 NLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYF 320
Score = 52 (23.4 bits), Expect = 2.7e-239, Sum P(3) = 2.7e-239
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 1 MSSLVERLRVRSDRKPIYQLDESDDDADFEQ 31
M++L++RLR R+ KP Y D+ D+ EQ
Sbjct: 1 MANLLQRLRRRTGPKPDYIEDKLDEYIREEQ 31
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 1484 (527.5 bits), Expect = 6.4e-173, Sum P(3) = 6.4e-173
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 631 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 685
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 686 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 744
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 745 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 804
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 805 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 864
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 865 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 920
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 921 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 980
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 981 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1040
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1041 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1100
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1101 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1160
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1161 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1220
Query: 757 V 757
V
Sbjct: 1221 V 1221
Score = 196 (74.1 bits), Expect = 6.4e-173, Sum P(3) = 6.4e-173
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 474 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 533
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 534 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 582
Score = 131 (51.2 bits), Expect = 3.4e-170, Sum P(4) = 3.4e-170
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 379 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 436
Score = 58 (25.5 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 562 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 616
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 617 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 660
Score = 51 (23.0 bits), Expect = 3.4e-170, Sum P(4) = 3.4e-170
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 662 YLIKWRDLPYDQASWESE 679
Score = 47 (21.6 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1315 GEEEEVEREIIKQEESVDPDYWE 1337
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1291 ELQGMNEYLSSFKVAQYVVREEEMG 1315
Score = 38 (18.4 bits), Expect = 6.4e-173, Sum P(3) = 6.4e-173
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 11 RSDRKPIYQLDESDDDA 27
+S RK + DE DDD+
Sbjct: 149 KSKRKEEEEEDEDDDDS 165
Score = 38 (18.4 bits), Expect = 2.1e-160, Sum P(4) = 2.1e-160
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 KCLVPPLKAPPSGSWRCPECVSP 98
K L P + P GS R P+ P
Sbjct: 286 KDLGPNARRKPKGSPRVPDAKKP 308
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 1493 (530.6 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 310/588 (52%), Positives = 395/588 (67%)
Query: 187 IRPEWTTVDRILA-CRGEDDEKEYLVKYKELSYDECYWE--------YESDISAFQPEIE 237
I+PEW TV RI+ + YLVK+K+L YD+ WE Y+ ++ E
Sbjct: 677 IKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSYWRHRE 736
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEGLN 295
+ R K+K D S+ +YE P F++ GG+LH YQLEGLN
Sbjct: 737 LIMGEDPAQPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLN 796
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWEREFA 353
+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWEREF
Sbjct: 797 WLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQ 856
Query: 354 TWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTS 413
WAP+ VV Y G +R IIRE EF F + ++KF VLLTS
Sbjct: 857 MWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLLTS 912
Query: 414 YEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDE 473
YE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL+E
Sbjct: 913 YELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEE 972
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKE 533
LF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K E
Sbjct: 973 LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE 1032
Query: 534 LILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEGVE 590
LI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ + +E
Sbjct: 1033 LIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAME 1092
Query: 591 -PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
P + L++SSGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++ +
Sbjct: 1093 SPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGY 1152
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
+YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWNPH
Sbjct: 1153 KYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPH 1212
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1213 NDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1260
Score = 200 (75.5 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 52/152 (34%), Positives = 73/152 (48%)
Query: 19 QLDESDDDADFEQ-GKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKC 77
Q + +++ D+E+ G+ G EK E D + C+ C + L+ CD C +YH C
Sbjct: 481 QWEAKEEEEDYEEEGEEG---EKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHC 533
Query: 78 LVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSK 126
L PPL P+G W CP C P+ + KIL P VA GD D
Sbjct: 534 LNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGDPDAPPPRVL 593
Query: 127 Q-IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
Q +++ VKW GLSY HC+W E + L+ F
Sbjct: 594 QGRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 624
Score = 130 (50.8 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 432 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 475
Score = 58 (25.5 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 598 EREFFVKWVGLSYWHCSWAKELQLEIF 624
Score = 56 (24.8 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKWK L Y TW
Sbjct: 700 YLVKWKDLPYDQSTW 714
Score = 52 (23.4 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1278 DILKFGTEELFKDENEGENKEEDSSVIH 1305
Score = 38 (18.4 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K K
Sbjct: 649 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSMDKKGNYHYLVKWKD 706
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +Y+ H +
Sbjct: 707 LPYDQSTWEEDEMNIPEYDDHKQSY 731
Score = 37 (18.1 bits), Expect = 1.0e-154, Sum P(2) = 1.0e-154
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIE 237
E++E+E +V +E +E E E ++ A + E
Sbjct: 5 EEEEEEMVVSEEEEEEEEEGDEEEEEVEAADEDDE 39
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 1493 (530.6 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 310/588 (52%), Positives = 395/588 (67%)
Query: 187 IRPEWTTVDRILA-CRGEDDEKEYLVKYKELSYDECYWE--------YESDISAFQPEIE 237
I+PEW TV RI+ + YLVK+K+L YD+ WE Y+ ++ E
Sbjct: 677 IKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSYWRHRE 736
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEGLN 295
+ R K+K D S+ +YE P F++ GG+LH YQLEGLN
Sbjct: 737 LIMGEDPAQPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLN 796
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWEREFA 353
+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWEREF
Sbjct: 797 WLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQ 856
Query: 354 TWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTS 413
WAP+ VV Y G +R IIRE EF F + ++KF VLLTS
Sbjct: 857 MWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLLTS 912
Query: 414 YEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDE 473
YE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL+E
Sbjct: 913 YELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEE 972
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKE 533
LF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K E
Sbjct: 973 LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE 1032
Query: 534 LILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEGVE 590
LI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ + +E
Sbjct: 1033 LIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAME 1092
Query: 591 -PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
P + L++SSGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++ +
Sbjct: 1093 SPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGY 1152
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
+YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWNPH
Sbjct: 1153 KYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPH 1212
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1213 NDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1260
Score = 200 (75.5 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 52/152 (34%), Positives = 73/152 (48%)
Query: 19 QLDESDDDADFEQ-GKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKC 77
Q + +++ D+E+ G+ G EK E D + C+ C + L+ CD C +YH C
Sbjct: 481 QWEAKEEEEDYEEEGEEG---EKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHC 533
Query: 78 LVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSK 126
L PPL P+G W CP C P+ + KIL P VA GD D
Sbjct: 534 LNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGDPDAPPPRVL 593
Query: 127 Q-IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
Q +++ VKW GLSY HC+W E + L+ F
Sbjct: 594 QGRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 624
Score = 130 (50.8 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 432 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 475
Score = 58 (25.5 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 598 EREFFVKWVGLSYWHCSWAKELQLEIF 624
Score = 56 (24.8 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKWK L Y TW
Sbjct: 700 YLVKWKDLPYDQSTW 714
Score = 52 (23.4 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1278 DILKFGTEELFKDENEGENKEEDSSVIH 1305
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K K
Sbjct: 649 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSMDKKGNYHYLVKWKD 706
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +Y+ H +
Sbjct: 707 LPYDQSTWEEDEMNIPEYDDHKQSY 731
Score = 37 (18.1 bits), Expect = 1.0e-154, Sum P(2) = 1.0e-154
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIE 237
E++E+E +V +E +E E E ++ A + E
Sbjct: 5 EEEEEEMVVSEEEEEEEEEGDEEEEEVEAADEDDE 39
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 1493 (530.6 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 310/588 (52%), Positives = 395/588 (67%)
Query: 187 IRPEWTTVDRILA-CRGEDDEKEYLVKYKELSYDECYWE--------YESDISAFQPEIE 237
I+PEW TV RI+ + YLVK+K+L YD+ WE Y+ ++ E
Sbjct: 582 IKPEWMTVHRIINHSMDKKGNYHYLVKWKDLPYDQSTWEEDEMNIPEYDDHKQSYWRHRE 641
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEGLN 295
+ R K+K D S+ +YE P F++ GG+LH YQLEGLN
Sbjct: 642 LIMGEDPAQPRKYKKKKKEIQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLN 701
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWEREFA 353
+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWEREF
Sbjct: 702 WLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQ 761
Query: 354 TWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTS 413
WAP+ VV Y G +R IIRE EF F + ++KF VLLTS
Sbjct: 762 MWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLLTS 817
Query: 414 YEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDE 473
YE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL+E
Sbjct: 818 YELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEE 877
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKE 533
LF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K E
Sbjct: 878 LFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTE 937
Query: 534 LILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEGVE 590
LI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ + +E
Sbjct: 938 LIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAME 997
Query: 591 -PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
P + L++SSGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++ +
Sbjct: 998 SPKLPSGAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGY 1057
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
+YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWNPH
Sbjct: 1058 KYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPH 1117
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1118 NDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1165
Score = 200 (75.5 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 52/152 (34%), Positives = 73/152 (48%)
Query: 19 QLDESDDDADFEQ-GKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKC 77
Q + +++ D+E+ G+ G EK E D + C+ C + L+ CD C +YH C
Sbjct: 386 QWEAKEEEEDYEEEGEEG---EKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHC 438
Query: 78 LVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSK 126
L PPL P+G W CP C P+ + KIL P VA GD D
Sbjct: 439 LNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGDPDAPPPRVL 498
Query: 127 Q-IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
Q +++ VKW GLSY HC+W E + L+ F
Sbjct: 499 QGRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 529
Score = 130 (50.8 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 337 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 380
Score = 58 (25.5 bits), Expect = 5.1e-169, Sum P(3) = 5.1e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 503 EREFFVKWVGLSYWHCSWAKELQLEIF 529
Score = 56 (24.8 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKWK L Y TW
Sbjct: 605 YLVKWKDLPYDQSTW 619
Score = 52 (23.4 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1183 DILKFGTEELFKDENEGENKEEDSSVIH 1210
Score = 38 (18.4 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K K
Sbjct: 554 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSMDKKGNYHYLVKWKD 611
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +Y+ H +
Sbjct: 612 LPYDQSTWEEDEMNIPEYDDHKQSY 636
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 1492 (530.3 bits), Expect = 1.6e-171, Sum P(2) = 1.6e-171
Identities = 311/590 (52%), Positives = 397/590 (67%)
Query: 187 IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWE--------YESDISAFQPE 235
I+PEW TV RI+ D+K YLVK+++L YD+ WE YE ++
Sbjct: 626 IKPEWMTVHRII--NHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSYWRH 683
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEG 293
E + R K+K D S+ +YE P F++ GG+LH YQLEG
Sbjct: 684 RELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEG 743
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWERE 351
LN+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWERE
Sbjct: 744 LNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWERE 803
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
F WAP+ VV Y G +R IIRE EF F + ++KF VLL
Sbjct: 804 FQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLL 859
Query: 412 TSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
TSYE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL
Sbjct: 860 TSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNL 919
Query: 472 DELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K
Sbjct: 920 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK 979
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEG 588
ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ +
Sbjct: 980 TELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAA 1039
Query: 589 VE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
+E P + L+++SGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++
Sbjct: 1040 MESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE 1099
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
++YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWN
Sbjct: 1100 GYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWN 1159
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
PH D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1160 PHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209
Score = 197 (74.4 bits), Expect = 1.6e-171, Sum P(2) = 1.6e-171
Identities = 52/152 (34%), Positives = 71/152 (46%)
Query: 18 YQLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKC 77
++ E DDD + E + G EK E D + C+ C + L+ CD C +YH C
Sbjct: 430 WEAKEEDDDYEEEGEEEG---EKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHC 482
Query: 78 LVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSK 126
L PPL P+G W CP C P+ + KIL P VA G+ D
Sbjct: 483 LNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPDAPPPRPL 542
Query: 127 Q-IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
Q +++ VKW GLSY HC+W E + L+ F
Sbjct: 543 QGRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 573
Score = 130 (50.8 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 380 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 58 (25.5 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 547 EREFFVKWVGLSYWHCSWAKELQLEIF 573
Score = 53 (23.7 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKW+ L Y TW
Sbjct: 649 YLVKWRDLPYDQSTW 663
Score = 52 (23.4 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1227 DILKFGTEELFKDENEGENKEEDSSVIH 1254
Score = 40 (19.1 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K +
Sbjct: 598 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSVDKKGNYHYLVKWRD 655
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +YE H +
Sbjct: 656 LPYDQSTWEEDEMNIPEYEDHKQSY 680
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 1495 (531.3 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 312/590 (52%), Positives = 397/590 (67%)
Query: 187 IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWE--------YESDISAFQPE 235
I+PEW TV RI+ D+K YLVK+++L YD+ WE YE ++
Sbjct: 685 IKPEWMTVHRII--NHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQSYWRH 742
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEG 293
E + R K+K D S+ +YE P F++ GG+LH YQLEG
Sbjct: 743 RELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEG 802
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWERE 351
LN+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWERE
Sbjct: 803 LNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWERE 862
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
F WAP+ VV Y G +R IIRE EF F + ++KF VLL
Sbjct: 863 FQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLL 918
Query: 412 TSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
TSYE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL
Sbjct: 919 TSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNL 978
Query: 472 DELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K
Sbjct: 979 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK 1038
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEG 588
ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ +
Sbjct: 1039 TELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAA 1098
Query: 589 VE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
+E P + L++SSGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++
Sbjct: 1099 MESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE 1158
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
++YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWN
Sbjct: 1159 GYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWN 1218
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
PH D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1219 PHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1268
Score = 189 (71.6 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 49/151 (32%), Positives = 72/151 (47%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + +++ ++E+ + EK E D + C+ C + L+ CD C +YH CL
Sbjct: 488 QWEAKEEEEEYEE-EGEEEGEKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHCL 542
Query: 79 VPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSKQ 127
PPL P+G W CP C P+ + KIL P VA G+ DV Q
Sbjct: 543 NPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPDVPPPRPLQ 602
Query: 128 -IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
+++ VKW GLSY HC+W E + L+ F
Sbjct: 603 GRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 632
Score = 130 (50.8 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 439 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 482
Score = 58 (25.5 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 606 EREFFVKWVGLSYWHCSWAKELQLEIF 632
Score = 53 (23.7 bits), Expect = 1.1e-168, Sum P(3) = 1.1e-168
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKW+ L Y TW
Sbjct: 708 YLVKWRDLPYDQSTW 722
Score = 52 (23.4 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1286 DILKFGTEELFKDENEGENKEEDSSVIH 1313
Score = 40 (19.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K +
Sbjct: 657 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSVDKKGNYHYLVKWRD 714
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +YE H +
Sbjct: 715 LPYDQSTWEEDEMNIPEYEEHKQSY 739
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 1495 (531.3 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 312/590 (52%), Positives = 397/590 (67%)
Query: 187 IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWE--------YESDISAFQPE 235
I+PEW TV RI+ D+K YLVK+++L YD+ WE YE ++
Sbjct: 626 IKPEWMTVHRII--NHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEEHKQSYWRH 683
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEG 293
E + R K+K D S+ +YE P F++ GG+LH YQLEG
Sbjct: 684 RELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEG 743
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWERE 351
LN+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWERE
Sbjct: 744 LNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWERE 803
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
F WAP+ VV Y G +R IIRE EF F + ++KF VLL
Sbjct: 804 FQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLL 859
Query: 412 TSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
TSYE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL
Sbjct: 860 TSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNL 919
Query: 472 DELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K
Sbjct: 920 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK 979
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEG 588
ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ +
Sbjct: 980 TELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAA 1039
Query: 589 VE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
+E P + L++SSGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++
Sbjct: 1040 MESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE 1099
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
++YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWN
Sbjct: 1100 GYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWN 1159
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
PH D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1160 PHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209
Score = 189 (71.6 bits), Expect = 5.4e-171, Sum P(2) = 5.4e-171
Identities = 49/151 (32%), Positives = 72/151 (47%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + +++ ++E+ + EK E D + C+ C + L+ CD C +YH CL
Sbjct: 429 QWEAKEEEEEYEE-EGEEEGEKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHCL 483
Query: 79 VPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSKQ 127
PPL P+G W CP C P+ + KIL P VA G+ DV Q
Sbjct: 484 NPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAVPAPQQADGNPDVPPPRPLQ 543
Query: 128 -IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
+++ VKW GLSY HC+W E + L+ F
Sbjct: 544 GRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 573
Score = 130 (50.8 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 380 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 58 (25.5 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 547 EREFFVKWVGLSYWHCSWAKELQLEIF 573
Score = 53 (23.7 bits), Expect = 1.1e-168, Sum P(3) = 1.1e-168
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKW+ L Y TW
Sbjct: 649 YLVKWRDLPYDQSTW 663
Score = 52 (23.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1227 DILKFGTEELFKDENEGENKEEDSSVIH 1254
Score = 40 (19.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K +
Sbjct: 598 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSVDKKGNYHYLVKWRD 655
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +YE H +
Sbjct: 656 LPYDQSTWEEDEMNIPEYEEHKQSY 680
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 1489 (529.2 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 313/626 (50%), Positives = 414/626 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWE--------YESDISAFQPEIE 237
I+PEW + RIL + + YL+K+K+L YD+C WE Y+S A+ E
Sbjct: 533 IKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDSLKQAYWGHRE 592
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGGSLHPYQLE 292
+ +R + K K D E T +++ P ++ +GG+LHPYQLE
Sbjct: 593 LMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE 652
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APLST+ NWER
Sbjct: 653 GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER 712
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP VV Y G ++R++IRE EF F + +IKF VL
Sbjct: 713 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----EVQIKFHVL 768
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LLTGTPLQNN
Sbjct: 769 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 828
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P
Sbjct: 829 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 888
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LE 587
K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ +
Sbjct: 889 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 948
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLDLLED+L +
Sbjct: 949 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEY 1008
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 1009 EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 1068
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------G 758
NPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ K+KM+L HLVV G
Sbjct: 1069 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG 1128
Query: 759 RLKAQNINQVTIFFQTWRLLSCSVEG 784
+ Q ++ + + F T L VEG
Sbjct: 1129 SMTKQELDDI-LKFGTEELFKDDVEG 1153
Score = 194 (73.4 bits), Expect = 6.9e-171, Sum P(2) = 6.9e-171
Identities = 49/152 (32%), Positives = 71/152 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD D ++G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 338 QWEPKDDDDDEDEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 388
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D D K
Sbjct: 389 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVDPGVPPPKPL 448
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
I +++ VKW GLSY HC+WV E + L+ +
Sbjct: 449 EGIPEREFFVKWAGLSYWHCSWVKELQQLELY 480
Score = 132 (51.5 bits), Expect = 1.5e-169, Sum P(3) = 1.5e-169
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 289 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 332
Score = 65 (27.9 bits), Expect = 1.5e-169, Sum P(3) = 1.5e-169
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 556 YLIKWKDLPYDQCTW 570
Score = 56 (24.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTEST 265
E+E+ VK+ LSY C W + Q ++E + + R+++ + + P D
Sbjct: 453 EREFFVKWAGLSYWHCSW-----VKELQ-QLELYHTVMYRNYQRKNDMDEPPPFDYGSGD 506
Query: 266 KKPKEFQQYEHSP 278
+ K ++ P
Sbjct: 507 EDGKSEKRKNKDP 519
Score = 45 (20.9 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 588 GVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
G E +D E + +E S + D + KL ++ ++ Q+M + L +FK
Sbjct: 1142 GTEELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLS---SFK 1198
Query: 648 KWQYE-RIDGKVGGAERQI 665
QY R + V ER+I
Sbjct: 1199 VAQYVVREEDGVEEVEREI 1217
Score = 40 (19.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 543 KQKEYYKAILTRNYQ 557
+Q E Y ++ RNYQ
Sbjct: 475 QQLELYHTVMYRNYQ 489
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 482 DAGKFGSLEEFQEEFKDINQE-EQISRLH 509
D KFG+ E F+++ + N++ E S +H
Sbjct: 1137 DILKFGTEELFKDDVEGDNKDVEDSSVIH 1165
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1370 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1416
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 597 NESFKQLLESSGKLQLLDKMMV---KLKEQGHRVLIYSQFQHM--LDLLED 642
NE FK + L++ +K + KL EQ ++I Q + L++ +D
Sbjct: 1661 NEPFKSEIHKGNYLEMKNKFLARRFKLLEQA--LVIEEQLRRAAYLNMTQD 1709
Score = 37 (18.1 bits), Expect = 3.7e-08, Sum P(3) = 3.7e-08
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 252 NKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS 285
+KQ+SS ++ +E ++ + SPE L G+
Sbjct: 1499 DKQESSDGKERAREERLEEMEKAQPSPEQLLKGN 1532
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 1492 (530.3 bits), Expect = 8.8e-171, Sum P(2) = 8.8e-171
Identities = 311/590 (52%), Positives = 397/590 (67%)
Query: 187 IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWE--------YESDISAFQPE 235
I+PEW TV RI+ D+K YLVK+++L YD+ WE YE ++
Sbjct: 624 IKPEWMTVHRII--NHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSYWRH 681
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEG 293
E + R K+K D S+ +YE P F++ GG+LH YQLEG
Sbjct: 682 RELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEG 741
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWERE 351
LN+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWERE
Sbjct: 742 LNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWERE 801
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
F WAP+ VV Y G +R IIRE EF F + ++KF VLL
Sbjct: 802 FQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLL 857
Query: 412 TSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
TSYE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL
Sbjct: 858 TSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNL 917
Query: 472 DELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K
Sbjct: 918 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK 977
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEG 588
ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ +
Sbjct: 978 TELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAA 1037
Query: 589 VE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
+E P + L+++SGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++
Sbjct: 1038 MESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE 1097
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
++YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWN
Sbjct: 1098 GYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWN 1157
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
PH D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1158 PHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1207
Score = 190 (71.9 bits), Expect = 8.8e-171, Sum P(2) = 8.8e-171
Identities = 48/151 (31%), Positives = 72/151 (47%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + +++ ++E+G+ EK E D + C+ C + L+ CD C +YH CL
Sbjct: 428 QWEAKEEEEEYEEGEEEG--EKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHCL 481
Query: 79 VPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSKQ 127
PPL P+G W CP C P+ + KIL P V+ G+ D Q
Sbjct: 482 NPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVSVPAPQQADGNPDAPPPRPLQ 541
Query: 128 -IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
+++ VKW GLSY HC+W E + L+ F
Sbjct: 542 GRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 571
Score = 130 (50.8 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 379 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 422
Score = 58 (25.5 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 545 EREFFVKWVGLSYWHCSWAKELQLEIF 571
Score = 53 (23.7 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKW+ L Y TW
Sbjct: 647 YLVKWRDLPYDQSTW 661
Score = 52 (23.4 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1225 DILKFGTEELFKDENEGENKEEDSSVIH 1252
Score = 41 (19.5 bits), Expect = 1.6e-159, Sum P(3) = 1.6e-159
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 104 KILDCEMRPTVAGDSDV 120
K+L C PTVAG+ +V
Sbjct: 357 KVLGC---PTVAGEEEV 370
Score = 40 (19.1 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K +
Sbjct: 596 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSVDKKGNYHYLVKWRD 653
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +YE H +
Sbjct: 654 LPYDQSTWEEDEMNIPEYEDHKQSY 678
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 1492 (530.3 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 311/590 (52%), Positives = 397/590 (67%)
Query: 187 IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWE--------YESDISAFQPE 235
I+PEW TV RI+ D+K YLVK+++L YD+ WE YE ++
Sbjct: 622 IKPEWMTVHRII--NHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIPEYEDHKQSYWRH 679
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHPYQLEG 293
E + R K+K D S+ +YE P F++ GG+LH YQLEG
Sbjct: 680 RELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEG 739
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWERE 351
LN+LRFSW++ T ILADEMGLGKTIQ+I FL SL+ G P LV APLST+ NWERE
Sbjct: 740 LNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWERE 799
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
F WAP+ VV Y G +R IIRE EF F + ++KF VLL
Sbjct: 800 FQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR----EAQVKFHVLL 855
Query: 412 TSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
TSYE+I +D A+L I+W C++VDE HRLKN SK F L Y H++LLTGTPLQNNL
Sbjct: 856 TSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNL 915
Query: 472 DELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K
Sbjct: 916 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAK 975
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEG 588
ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+N++M+L+K C HPY+ +
Sbjct: 976 TELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAA 1035
Query: 589 VE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
+E P + L+++SGKL LL KM+ KLKEQGHRVLI+SQ MLDLLED+L ++
Sbjct: 1036 MESPKLPSGAYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYE 1095
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
++YERIDG + GA RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVII+DSDWN
Sbjct: 1096 GYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWN 1155
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
PH D+QA +RAHR+GQ NKVMI+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1156 PHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1205
Score = 189 (71.6 bits), Expect = 1.1e-170, Sum P(2) = 1.1e-170
Identities = 49/151 (32%), Positives = 71/151 (47%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + +++ D+E+ + EK E D + C+ C + L+ CD C +YH CL
Sbjct: 425 QWEAKEEEEDYEE-EGEEEGEKEEE----DDHMEYCRVCKDGGELLCCDACISSYHIHCL 479
Query: 79 VPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM-RPTVA--------GDSDVSKLGSKQ 127
PPL P+G W CP C P+ + KIL P VA G+ D Q
Sbjct: 480 NPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWRWGEPPVAMPAPQQADGNPDAPPPRPLQ 539
Query: 128 -IFVKQYLVKWKGLSYLHCTWVPEKEFLKAF 157
+++ VKW GLSY HC+W E + L+ F
Sbjct: 540 GRSEREFFVKWVGLSYWHCSWAKELQ-LEIF 569
Score = 130 (50.8 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L P G W CP C
Sbjct: 376 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 419
Score = 58 (25.5 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAF 232
E+E+ VK+ LSY C W E + F
Sbjct: 543 EREFFVKWVGLSYWHCSWAKELQLEIF 569
Score = 53 (23.7 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 133 YLVKWKGLSYLHCTW 147
YLVKW+ L Y TW
Sbjct: 645 YLVKWRDLPYDQSTW 659
Score = 52 (23.4 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLH 509
D KFG+ E F++E + N+EE S +H
Sbjct: 1223 DILKFGTEELFKDENEGENKEEDSSVIH 1250
Score = 40 (19.1 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 20/85 (23%), Positives = 32/85 (37%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPE---IERFIK--IQSRSHRSSCNKQKS 256
GEDD K K K+ Y E +Y +PE + R I + + + K +
Sbjct: 594 GEDDGKSDKRKVKDPHYAEMEEKYYR--FGIKPEWMTVHRIINHSVDKKGNYHYLVKWRD 651
Query: 257 SPQDVTESTKKPKEFQQYE-HSPEF 280
P D + + +YE H +
Sbjct: 652 LPYDQSTWEEDEMNIPEYEDHKQSY 676
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 609 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 663
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 664 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 722
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 723 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 782
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 783 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 842
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 843 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 898
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 899 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 958
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1018
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1019 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1078
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1079 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1138
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1139 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1198
Query: 757 V 757
V
Sbjct: 1199 V 1199
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 452 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 511
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 512 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 560
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 58 (25.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 540 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 594
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 595 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 638
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 640 YLIKWRDLPYDQASWESE 657
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1293 GEEEEVEREIIKQEESVDPDYWE 1315
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1269 ELQGMNEYLSSFKVAQYVVREEEMG 1293
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 629 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 683
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 684 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 742
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 743 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 802
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 803 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 862
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 863 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 918
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 919 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 978
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 979 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1038
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1039 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1098
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1099 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1158
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1159 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1218
Query: 757 V 757
V
Sbjct: 1219 V 1219
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 472 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 531
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 532 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 580
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 377 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 434
Score = 58 (25.5 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 560 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 614
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 615 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 658
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 660 YLIKWRDLPYDQASWESE 677
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1313 GEEEEVEREIIKQEESVDPDYWE 1335
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1289 ELQGMNEYLSSFKVAQYVVREEEMG 1313
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 602 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 656
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 657 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 715
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 716 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 775
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 776 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 835
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 836 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 891
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 892 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 951
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 952 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1011
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1012 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1071
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1072 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1131
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1132 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1191
Query: 757 V 757
V
Sbjct: 1192 V 1192
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 445 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 504
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 505 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 553
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 58 (25.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 533 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 587
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 588 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 631
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 633 YLIKWRDLPYDQASWESE 650
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1286 GEEEEVEREIIKQEESVDPDYWE 1308
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1262 ELQGMNEYLSSFKVAQYVVREEEMG 1286
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 609 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 663
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 664 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 722
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 723 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 782
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 783 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 842
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 843 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 898
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 899 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 958
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1018
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1019 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1078
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1079 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1138
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1139 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1198
Query: 757 V 757
V
Sbjct: 1199 V 1199
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 452 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 511
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 512 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 560
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 58 (25.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 540 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 594
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 595 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 638
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 640 YLIKWRDLPYDQASWESE 657
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1293 GEEEEVEREIIKQEESVDPDYWE 1315
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1269 ELQGMNEYLSSFKVAQYVVREEEMG 1293
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 609 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 663
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 664 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 722
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 723 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 782
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 783 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 842
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 843 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 898
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 899 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 958
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 959 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1018
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1019 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1078
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1079 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1138
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1139 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1198
Query: 757 V 757
V
Sbjct: 1199 V 1199
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 452 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 511
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 512 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 560
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 58 (25.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 540 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 594
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 595 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 638
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 640 YLIKWRDLPYDQASWESE 657
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1293 GEEEEVEREIIKQEESVDPDYWE 1315
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1269 ELQGMNEYLSSFKVAQYVVREEEMG 1293
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 602 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 656
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 657 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 715
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 716 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 775
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 776 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 835
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 836 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 891
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 892 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 951
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 952 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1011
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1012 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1071
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1072 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1131
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1132 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1191
Query: 757 V 757
V
Sbjct: 1192 V 1192
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 445 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 504
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 505 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 553
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 58 (25.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 533 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 587
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 588 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 631
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 633 YLIKWRDLPYDQASWESE 650
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1286 GEEEEVEREIIKQEESVDPDYWE 1308
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1262 ELQGMNEYLSSFKVAQYVVREEEMG 1286
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 602 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 656
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 657 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 715
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 716 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 775
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 776 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 835
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 836 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 891
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 892 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 951
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 952 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1011
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1012 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1071
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1072 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1131
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1132 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1191
Query: 757 V 757
V
Sbjct: 1192 V 1192
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 445 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 504
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 505 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 553
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 58 (25.5 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 533 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 587
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 588 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 631
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 633 YLIKWRDLPYDQASWESE 650
Score = 47 (21.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1286 GEEEEVEREIIKQEESVDPDYWE 1308
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1262 ELQGMNEYLSSFKVAQYVVREEEMG 1286
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 1484 (527.5 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 319/601 (53%), Positives = 399/601 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISAFQPE 235
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E D+ +
Sbjct: 630 EERFYRYGIKPEWMMIHRIL--NHSVDKKGHVHYLIKWRDLPYDQASWESE-DVEI--QD 684
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL--S 282
+ F K +HR ++ P + K +P E +YE PE+L +
Sbjct: 685 YDLF-KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDAT 743
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVA 340
GG+LHPYQ+EGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV A
Sbjct: 744 GGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSA 803
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 804 PLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 863
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H++
Sbjct: 864 ----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKL 919
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+
Sbjct: 920 LLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRL 979
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKL 579
K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 980 KADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKC 1039
Query: 580 CCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ M
Sbjct: 1040 CNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKM 1099
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LDLLED+L + ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATA
Sbjct: 1100 LDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATA 1159
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ KKKM+L HLV
Sbjct: 1160 DTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLV 1219
Query: 757 V 757
V
Sbjct: 1220 V 1220
Score = 196 (74.1 bits), Expect = 1.4e-170, Sum P(2) = 1.4e-170
Identities = 41/109 (37%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CDTC +YH CL PPL P+G W CP C P + KIL +
Sbjct: 473 CRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 532
Query: 111 ---RPTVAG---DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
PT D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 533 QPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKWQGMSYWHCSWVSE 581
Score = 131 (51.2 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 42 ERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
E + +D + D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 378 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 435
Score = 58 (25.5 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP--QDVTE 263
E+++ VK++ +SY C W +S Q E+ + ++ ++ ++ S D +
Sbjct: 561 ERQFFVKWQGMSYWHCSW-----VSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEK 615
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
S K+ + ++ E + P + L S K+ HV
Sbjct: 616 SRKRKNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHV 659
Score = 51 (23.0 bits), Expect = 2.0e-167, Sum P(3) = 2.0e-167
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 661 YLIKWRDLPYDQASWESE 678
Score = 47 (21.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1314 GEEEEVEREIIKQEESVDPDYWE 1336
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1290 ELQGMNEYLSSFKVAQYVVREEEMG 1314
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 1489 (529.2 bits), Expect = 2.3e-170, Sum P(2) = 2.3e-170
Identities = 313/628 (49%), Positives = 416/628 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYES-DI-------SAFQPEIE 237
I+PEW + RIL + + YL+K+K+L YD+C WE + DI A+ E
Sbjct: 587 IKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRE 646
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGGSLHPYQLE 292
+ +R + K K D E T +++ P ++ +GG+LHPYQLE
Sbjct: 647 LMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE 706
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APLST+ NWER
Sbjct: 707 GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER 766
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP VV Y G ++R++IRE EF F + +IKF VL
Sbjct: 767 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----EVQIKFHVL 822
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LLTGTPLQNN
Sbjct: 823 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 882
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P
Sbjct: 883 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 942
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LE 587
K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ +
Sbjct: 943 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 1002
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLDLLED+L +
Sbjct: 1003 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEY 1062
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 1063 EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 1122
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------G 758
NPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ K+KM+L HLVV G
Sbjct: 1123 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG 1182
Query: 759 RLKAQNINQVTIFFQTWRLLSCSVEGIL 786
+ Q ++ + + F T L VEG++
Sbjct: 1183 SMTKQELDDI-LKFGTEELFKDDVEGMM 1209
Score = 189 (71.6 bits), Expect = 2.3e-170, Sum P(2) = 2.3e-170
Identities = 48/145 (33%), Positives = 68/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 393 QWEPKDDDDEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 443
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D + S K
Sbjct: 444 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPSLPPPKPL 503
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPE 150
I +++ VKW GLSY HC+WV E
Sbjct: 504 EGIPEREFFVKWAGLSYWHCSWVKE 528
Score = 132 (51.5 bits), Expect = 1.5e-169, Sum P(3) = 1.5e-169
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 65 (27.9 bits), Expect = 1.5e-169, Sum P(3) = 1.5e-169
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 610 YLIKWKDLPYDQCTW 624
Score = 56 (24.8 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 508 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 540
Score = 41 (19.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/55 (18%), Positives = 29/55 (52%)
Query: 228 DISAFQPEIERFIKIQSRSHRSSCNKQKSS---PQDVTESTKKPKEFQQYEHSPE 279
++ A ++R ++ + + H S +K+++ P++ ++ P++ + E PE
Sbjct: 1591 EVQALPAALDR-VESEDK-HESPASKERAREERPEETEKAPPSPEQLPREEVLPE 1643
Score = 40 (19.1 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
++ E+ + E+Q L R L +R++K V +++ + ELS Q EY
Sbjct: 1318 DYWEKLLRHHYEQQQEDLARNLGKG--KRIRKQVNYNDASQEDQEWQDELSDNQSEY 1372
Score = 39 (18.8 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 530 QLELYHTVMYRNYQ 543
Score = 39 (18.8 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1470 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1516
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 1492 (530.3 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 314/628 (50%), Positives = 416/628 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWE--------YESDISAFQPEIE 237
I+PEW V RIL + + YL+K+K+L YD+C WE Y+S A+ E
Sbjct: 519 IKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDSLKQAYWGHRE 578
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGGSLHPYQLE 292
+ +R + K K D E T +++ P ++ +GG+LHPYQLE
Sbjct: 579 LMLGEDARLPKRLVKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE 638
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APLST+ NWER
Sbjct: 639 GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER 698
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP VV Y G ++R++IRE EF F + +IKF VL
Sbjct: 699 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----EVQIKFHVL 754
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LLTGTPLQNN
Sbjct: 755 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 814
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P
Sbjct: 815 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 874
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LE 587
K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ +
Sbjct: 875 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 934
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLDLLED+L +
Sbjct: 935 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEY 994
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 995 EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 1054
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------G 758
NPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ K+KM+L HLVV G
Sbjct: 1055 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG 1114
Query: 759 RLKAQNINQVTIFFQTWRLLSCSVEGIL 786
+ Q ++ + + F T L VEG++
Sbjct: 1115 SMTKQELDDI-LKFGTEELFKDDVEGMM 1141
Score = 185 (70.2 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 47/145 (32%), Positives = 67/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 325 QWEPKDDDDEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 375
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D + K
Sbjct: 376 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPPKPL 435
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPE 150
I +++ VKW GLSY HC+WV E
Sbjct: 436 EGIPEREFFVKWAGLSYWHCSWVKE 460
Score = 132 (51.5 bits), Expect = 7.4e-170, Sum P(3) = 7.4e-170
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 276 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 319
Score = 65 (27.9 bits), Expect = 7.4e-170, Sum P(3) = 7.4e-170
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 542 YLIKWKDLPYDQCTW 556
Score = 56 (24.8 bits), Expect = 6.5e-169, Sum P(3) = 6.5e-169
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 440 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 472
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
++ E+ + E+Q L R L +R++K V +++ + ELS Q EY
Sbjct: 1250 DYWEKLLRHHYEQQQEDLARNLGKG--KRIRKQVNYNDASQEDQEWQDELSDNQSEY 1304
Score = 39 (18.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 462 QLELYHTVMYRNYQ 475
Score = 39 (18.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1402 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1448
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 1490 (529.6 bits), Expect = 4.8e-170, Sum P(2) = 4.8e-170
Identities = 313/628 (49%), Positives = 416/628 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYES-DI-------SAFQPEIE 237
I+PEW + RIL + + YL+K+K+L YD+C WE + DI A+ E
Sbjct: 450 IKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRE 509
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGGSLHPYQLE 292
+ +R + K K D E T +++ P ++ +GG+LHPYQLE
Sbjct: 510 LMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE 569
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APLST+ NWER
Sbjct: 570 GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER 629
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP VV Y G ++R++IRE EF F + +IKF VL
Sbjct: 630 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----EVQIKFHVL 685
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LLTGTPLQNN
Sbjct: 686 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 745
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P
Sbjct: 746 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 805
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LE 587
K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ +
Sbjct: 806 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 865
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLDLLED+L +
Sbjct: 866 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEY 925
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 926 EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 985
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------G 758
NPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ K+KM+L HLVV G
Sbjct: 986 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG 1045
Query: 759 RLKAQNINQVTIFFQTWRLLSCSVEGIL 786
+ Q ++ + + F T L VEG++
Sbjct: 1046 SMTKQELDDI-LKFGTEELFKDDVEGMM 1072
Score = 185 (70.2 bits), Expect = 4.8e-170, Sum P(2) = 4.8e-170
Identities = 47/145 (32%), Positives = 67/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 256 QWEPKDDDDEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 306
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D + K
Sbjct: 307 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPPKPL 366
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPE 150
I +++ VKW GLSY HC+WV E
Sbjct: 367 EGIPEREFFVKWAGLSYWHCSWVKE 391
Score = 132 (51.5 bits), Expect = 1.2e-169, Sum P(3) = 1.2e-169
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 207 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 250
Score = 65 (27.9 bits), Expect = 1.2e-169, Sum P(3) = 1.2e-169
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 473 YLIKWKDLPYDQCTW 487
Score = 56 (24.8 bits), Expect = 1.1e-168, Sum P(3) = 1.1e-168
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 371 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 403
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
++ E+ + E+Q L R L +R++K V +++ + ELS Q EY
Sbjct: 1181 DYWEKLLRHHYEQQQEDLARNLGKG--KRIRKQVNYNDASQEDQEWQDELSDNQSEY 1235
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 393 QLELYHTVMYRNYQ 406
Score = 39 (18.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1333 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1379
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 597 NESFKQLLESSGKLQLLDKMMV---KLKEQGHRVLIYSQFQHM--LDLLED 642
NE FK + L++ +K + KL EQ ++I Q + L++ +D
Sbjct: 1627 NEPFKSEIHKGNYLEMKNKFLARRFKLLEQA--LVIEEQLRRAAYLNMTQD 1675
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 1489 (529.2 bits), Expect = 6.1e-170, Sum P(2) = 6.1e-170
Identities = 314/626 (50%), Positives = 414/626 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWE--------YESDISAFQPEIE 237
I+PEW V RIL + + YL+K+K+L YD+C WE Y+S A+ E
Sbjct: 503 IKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDSLKQAYWGHRE 562
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGGSLHPYQLE 292
+ +R + K K D E T +++ P ++ +GG+LHPYQLE
Sbjct: 563 LMLGEDARLPKRLVKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE 622
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APLST+ NWER
Sbjct: 623 GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER 682
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP VV Y G ++R++IRE EF F + +IKF VL
Sbjct: 683 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----EVQIKFHVL 738
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LLTGTPLQNN
Sbjct: 739 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 798
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P
Sbjct: 799 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 858
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LE 587
K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ +
Sbjct: 859 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 918
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLDLLED+L +
Sbjct: 919 AVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEY 978
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 979 EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 1038
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------G 758
NPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ K+KM+L HLVV G
Sbjct: 1039 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG 1098
Query: 759 RLKAQNINQVTIFFQTWRLLSCSVEG 784
+ Q ++ + + F T L VEG
Sbjct: 1099 SMTKQELDDI-LKFGTEELFKDDVEG 1123
Score = 185 (70.2 bits), Expect = 6.1e-170, Sum P(2) = 6.1e-170
Identities = 47/145 (32%), Positives = 67/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 309 QWEPKDDDDEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 359
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D + K
Sbjct: 360 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPPKPL 419
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPE 150
I +++ VKW GLSY HC+WV E
Sbjct: 420 EGIPEREFFVKWAGLSYWHCSWVKE 444
Score = 132 (51.5 bits), Expect = 1.5e-169, Sum P(3) = 1.5e-169
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 260 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 303
Score = 65 (27.9 bits), Expect = 1.5e-169, Sum P(3) = 1.5e-169
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 526 YLIKWKDLPYDQCTW 540
Score = 56 (24.8 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 424 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 456
Score = 45 (20.9 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 588 GVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
G E +D E + +E S + D + KL ++ ++ Q+M + L +FK
Sbjct: 1112 GTEELFKDDVEGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLS---SFK 1168
Query: 648 KWQYE-RIDGKVGGAERQI 665
QY R + V ER+I
Sbjct: 1169 VAQYVVREEDGVEEVEREI 1187
Score = 40 (19.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
++ E+ + E+Q L R L +R++K V +++ + ELS Q EY
Sbjct: 1197 DYWEKLLRHHYEQQQEDLARNLGKG--KRIRKQVNYNDASQEDQEWQDELSDNQSEY 1251
Score = 40 (19.1 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 524 VMKELPPKKELIL-RVELSSKQKEYYKAILTR 554
++KE+ P+KE IL ++E + E + I T+
Sbjct: 1522 LLKEVLPEKEKILDKLETDDTKAEEKEPIETQ 1553
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 446 QLELYHTVMYRNYQ 459
Score = 39 (18.8 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 482 DAGKFGSLEEFQEEFKDINQE-EQISRLH 509
D KFG+ E F+++ + N++ E S +H
Sbjct: 1107 DILKFGTEELFKDDVEGDNKDVEDSSVIH 1135
Score = 39 (18.8 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1349 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1395
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 1487 (528.5 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 314/628 (50%), Positives = 415/628 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEY-ESDI-------SAFQPEIE 237
I+PEW V RIL + + YL+K+K+L YD+C WE E DI + E
Sbjct: 585 IKPEWMMVHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDNLKQTYWGHRE 644
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGGSLHPYQLE 292
+ +R + K K D E T +++ P ++ +GG+LHPYQLE
Sbjct: 645 LMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE 704
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APLST+ NWER
Sbjct: 705 GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER 764
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP VV Y G ++R++IRE EF F + +IKF VL
Sbjct: 765 EFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKK----EVQIKFHVL 820
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LLTGTPLQNN
Sbjct: 821 LTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNN 880
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K DV K +P
Sbjct: 881 LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA 940
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LE 587
K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ +
Sbjct: 941 KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA 1000
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLDLLED+L +
Sbjct: 1001 AVEAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEY 1060
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 1061 EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 1120
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------G 758
NPH D+QA +RAHR+GQ KVMI+R +TR S+EER+ Q+ K+KM+L HLVV G
Sbjct: 1121 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSG 1180
Query: 759 RLKAQNINQVTIFFQTWRLLSCSVEGIL 786
+ Q ++ + + F T L VEG++
Sbjct: 1181 SMTKQELDDI-LKFGTEELFKDDVEGMM 1207
Score = 182 (69.1 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 46/145 (31%), Positives = 67/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 391 QWEPKDDDEEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 441
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG-DSDVSKLGS------ 125
PPL P+G W CP C P + +IL P + G + G
Sbjct: 442 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPEVEPGMPPPRPL 501
Query: 126 KQIFVKQYLVKWKGLSYLHCTWVPE 150
+ I +++ VKW GLSY HC+WV E
Sbjct: 502 EGIPEREFFVKWAGLSYWHCSWVKE 526
Score = 132 (51.5 bits), Expect = 2.5e-169, Sum P(3) = 2.5e-169
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 342 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 385
Score = 65 (27.9 bits), Expect = 2.5e-169, Sum P(3) = 2.5e-169
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 608 YLIKWKDLPYDQCTW 622
Score = 56 (24.8 bits), Expect = 2.2e-168, Sum P(3) = 2.2e-168
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 506 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 538
Score = 40 (19.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
++ E+ + E+Q L R L +R++K V +++ + ELS Q EY
Sbjct: 1316 DYWEKLLRHHYEQQQEDLARNLGKG--KRIRKQVNYNDASQEDQEWQDELSDNQSEY 1370
Score = 39 (18.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 528 QLELYHTVMYRNYQ 541
Score = 39 (18.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1468 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1514
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 1460 (519.0 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 310/594 (52%), Positives = 396/594 (66%)
Query: 187 IRPEWTTVDRILACRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
I+ EW + RIL D+K YL+K+++L+YD+ WE E D+ P+ + + K+Q
Sbjct: 600 IKMEWMVIHRIL--NHSVDKKNNCHYLIKWRDLTYDQATWELE-DMDL--PDYDTY-KLQ 653
Query: 244 SRSHRSSCNKQKSSP-QDVTESTK-----KPKEFQ------QYEHSPEFL--SGGSLHPY 289
+HR + P + + K +P E ++E P++L +GG+LHPY
Sbjct: 654 YWNHRELMMGDEGKPGKKIKIKGKMRKLDRPPENPVVDPTIKFERQPDYLDTTGGTLHPY 713
Query: 290 QLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRN 347
QLEGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV APLST+ N
Sbjct: 714 QLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIIN 773
Query: 348 WEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKF 407
WEREF WAP M VV YVG +R +IRE EF F +KF
Sbjct: 774 WEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKEAS----VKF 829
Query: 408 DVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPL 467
VLLTSYE+I +D+A L I W C++VDE HRLKN SK F L Y +H++LLTGTPL
Sbjct: 830 HVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLLTGTPL 889
Query: 468 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKE 527
QNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+K DV K
Sbjct: 890 QNNLEELFHLLNFLTPERFSNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKH 949
Query: 528 LPPKKELILRVELSSKQKEYYKAILTRNYQIL-TRRGGAQISLINVVMELRKLCCHPYML 586
+P K ELI+RVELS QK+YYK ILTRN++ L TR GG Q+SL+NVVM+L+K C HPY+
Sbjct: 950 MPSKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLF 1009
Query: 587 EGVEPDIEDTNESFKQ---LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY 643
+ + L +SSGKL LL KM+ KLKE GHRVLI+SQ MLDLLED+
Sbjct: 1010 PAAAMEAAKMPNGMYEGGGLTKSSGKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDF 1069
Query: 644 LTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYD 703
L + ++YERIDG + G RQ IDRFNA + +F FLLSTRAGGLGINLATADTV+IYD
Sbjct: 1070 LENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYD 1129
Query: 704 SDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
SDWNPH D+QA +RAHR+GQ KVMI+R +T+ S+EER+ Q+ KKKM+L HLVV
Sbjct: 1130 SDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVV 1183
Score = 177 (67.4 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 39/111 (35%), Positives = 55/111 (49%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEMR 111
C+ C + L+ CD+C +YH CL PPL P+G W CP C P + KIL
Sbjct: 433 CRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGKVQKILTWRWT 492
Query: 112 ----PT-VAGDSDV-------SKLGSKQIFVKQYLVKWKGLSYLHCTWVPE 150
PT V SD+ + L + +++ VKW+ +SY HC+WV E
Sbjct: 493 EPPPPTPVPRPSDLPTDAPDPTPLAGRP--EREFFVKWQNMSYWHCSWVTE 541
Score = 131 (51.2 bits), Expect = 6.2e-169, Sum P(4) = 6.2e-169
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P ++ P G+W CP C
Sbjct: 354 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHC 397
Score = 60 (26.2 bits), Expect = 0.00017, Sum P(4) = 0.00017
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTEST 265
E+E+ VK++ +SY C W ++ Q EI ++ R+++ + + P D
Sbjct: 521 EREFFVKWQNMSYWHCSW-----VTELQLEIH--CQVMFRNYQRKNDMDEPPPIDFGGEG 573
Query: 266 KKPKEFQQYEHSPEF 280
++ K ++ + P +
Sbjct: 574 EEEKSDKRKKKDPTY 588
Score = 55 (24.4 bits), Expect = 6.2e-169, Sum P(4) = 6.2e-169
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KW+ L+Y TW
Sbjct: 623 YLIKWRDLTYDQATW 637
Score = 46 (21.3 bits), Expect = 3.2e-169, Sum P(3) = 3.2e-169
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 2 SSLVERLRVRSDRK-PIYQLDESDDDAD 28
SS ER S R+ P + DE DDD++
Sbjct: 109 SSAAERNSAASKRREPEEEEDEDDDDSE 136
Score = 43 (20.2 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 24/104 (23%), Positives = 38/104 (36%)
Query: 164 RTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYW 223
+ KV N + +N N + +A+ E D A E+ EK + KE + +
Sbjct: 1556 KEKVKNGDGEKEANENKNSEVIAVPDE----DGRAASASEEKEKGK--EEKEKTPESSSE 1609
Query: 224 EYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKK 267
++D + E E S +K K S D S K
Sbjct: 1610 AEKADGKQEEKEEENAKSGDSEEKTDDTDKPKGSEADKETSDAK 1653
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 482 DAGKFGSLEEFQEEFKDINQEEQ 504
D KFG+ E F++E + N+E Q
Sbjct: 1201 DILKFGTEELFKDEGEGENKEGQ 1223
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ ++K V +
Sbjct: 1444 LFM-RHLCEPGADGA-----ESFADGVPREGLSRQHVLTRIGVMSLIRKKVQE 1490
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 1383 (491.9 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 280/548 (51%), Positives = 371/548 (67%)
Query: 222 YWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE----FQQYEHS 277
YW + + E+ R ++ R + K +D S +K +E ++YE
Sbjct: 550 YWHHRERM--LNDEVPRNVQKMIAKQREA--KGLGPKEDEVTSRRKKREKIDILKKYEVQ 605
Query: 278 PEFLS--GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERI 333
P+F+S GG+LHPYQLEG+N+LR WS T ILADEMGLGKT+QS+ FL +L G
Sbjct: 606 PDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTK 665
Query: 334 SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXX 393
P L+ APLST+ NWERE W P VV YVG ++R +IRE+EF F
Sbjct: 666 GPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVS 725
Query: 394 XXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQ 453
+ +KF VLLTSYE IN+D A L I W ++VDE HRLKN S F +L++
Sbjct: 726 KIKTL----ENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLRE 781
Query: 454 YSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLA 513
Y+ ++RVLLTGTPLQNNL+ELF L++FL +F LE F EF +I++E+QI +LH +L
Sbjct: 782 YNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLG 841
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILT-RRGGAQISLINV 572
PH+LRR+K DV+ +P K+ELI+RVELS+ QK+YYK ILTRN+ L + GG Q+SLIN+
Sbjct: 842 PHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINI 901
Query: 573 VMELRKLCCHPY--MLEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLI 629
+MEL+K C HPY M +E P +++ L++++GK LL KM+ KLK+ GHRVLI
Sbjct: 902 IMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLI 961
Query: 630 YSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGL 689
+SQ MLD+LED+ + ++YERIDG + G +RQ IDR+NA + +F FLLSTRAGGL
Sbjct: 962 FSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGL 1021
Query: 690 GINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKK 749
GINLATADTVIIYDSDWNPH D+QA +RAHRLGQ +KVMI+R +T+GS+EER+ + KKK
Sbjct: 1022 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKK 1081
Query: 750 MVLEHLVV 757
M+L HLVV
Sbjct: 1082 MLLTHLVV 1089
Score = 163 (62.4 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 49 AKDDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECV--SPLNDIDKIL 106
A D C+ C E+ N++ CDTC +YHA C+ PPL P G W CP C+ P I+KIL
Sbjct: 326 ANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKIL 385
Score = 147 (56.8 bits), Expect = 6.6e-167, Sum P(3) = 6.6e-167
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 27 ADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPP 86
A E + K + +V + ++C+ C + LM CDTCT AYH C+ ++ PP
Sbjct: 242 AALESARASKRARKEQGVVE-ENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPP 300
Query: 87 SGSWRCPEC 95
G W CP C
Sbjct: 301 EGDWSCPHC 309
Score = 131 (51.2 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 36/126 (28%), Positives = 65/126 (51%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLR-TKVNN-----FHRQMSSNNNAEED- 183
+++ VKWK L+Y C W+ E F + R+ KV++ F S ++++ D
Sbjct: 425 REFFVKWKYLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHSDHDP 484
Query: 184 ------FV--AIRPEWTTVDRILACRG-EDDEKEYLVKYKELSYDECYWEYE-SDISAFQ 233
F ++PEW + RI+ +++YLVK+KELSY+ WE + +DI+ ++
Sbjct: 485 YKLRERFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYE 544
Query: 234 PEIERF 239
I ++
Sbjct: 545 DAIIKY 550
Score = 74 (31.1 bits), Expect = 8.7e-09, Sum P(3) = 8.7e-09
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFI--KIQSRSHRSSCNKQKSSPQDVTE 263
E+E+ VK+K L+Y +C W E+ + + + R K+ S + S +
Sbjct: 424 EREFFVKWKYLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHSDHD 483
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
K + F QY PE++ +H +N L ++ S+Q +++ E+
Sbjct: 484 PYKLRERFYQYGVKPEWMQ---IHRI----INHLSYAKSQQDYLVKWKEL 526
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 31/140 (22%), Positives = 63/140 (45%)
Query: 137 WKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVN----NFHRQMSSNNNAEEDFVAIRPEWT 192
W+ L H E E K K R+R +VN N + S+ NN +++ E+
Sbjct: 1214 WEKLLKHHYEQDQETELQKLGKGK-RVRRQVNYASENMGQDWSAQNNQQQE-EDDGSEYG 1271
Query: 193 TVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCN 252
+ D + ++D +E + +E S E + ++ Q E+ F Q ++ ++
Sbjct: 1272 S-DNGELLQTDEDYEERRRRREERS--EKLPPLLAKVNG-QIEVLGFNPRQRKAFYNAVM 1327
Query: 253 KQKSSPQDVTESTKKPKEFQ 272
+ PQD+T+S+ + ++ +
Sbjct: 1328 RWGMPPQDLTQSSWQVRDLR 1347
Score = 39 (18.8 bits), Expect = 2.6e-143, Sum P(2) = 2.6e-143
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 202 GEDDEKEY--LVKYKELSYDECY-WEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP 258
G D ++E+ L+K E DE + E+ I+ ++++ K S R+S K+
Sbjct: 200 GHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKR-KAALESARAS--KRARKE 256
Query: 259 QDVTE 263
Q V E
Sbjct: 257 QGVVE 261
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 440 LKNKDSKLFSSLKQYSTRH 458
L+NK K+F + RH
Sbjct: 1346 LRNKSEKVFKAYSSLFMRH 1364
Score = 37 (18.1 bits), Expect = 5.4e-157, Sum P(3) = 5.4e-157
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 190 EWTTVDRILACRGEDDEKEYLVKYKELSYDE 220
EW+ I+ + EK ++KE+SY E
Sbjct: 366 EWSCPRCIIPEPAQRIEKILSWRWKEISYPE 396
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 203 EDDEKEY-LVKYKELSYDECYWE 224
+DDE E ++K D YWE
Sbjct: 1193 DDDEDETEVIKEGTEEQDPNYWE 1215
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 1383 (491.9 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 280/548 (51%), Positives = 371/548 (67%)
Query: 222 YWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE----FQQYEHS 277
YW + + E+ R ++ R + K +D S +K +E ++YE
Sbjct: 550 YWHHRERM--LNDEVPRNVQKMIAKQREA--KGLGPKEDEVTSRRKKREKIDILKKYEVQ 605
Query: 278 PEFLS--GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERI 333
P+F+S GG+LHPYQLEG+N+LR WS T ILADEMGLGKT+QS+ FL +L G
Sbjct: 606 PDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTK 665
Query: 334 SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXX 393
P L+ APLST+ NWERE W P VV YVG ++R +IRE+EF F
Sbjct: 666 GPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVS 725
Query: 394 XXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQ 453
+ +KF VLLTSYE IN+D A L I W ++VDE HRLKN S F +L++
Sbjct: 726 KIKTL----ENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLRE 781
Query: 454 YSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLA 513
Y+ ++RVLLTGTPLQNNL+ELF L++FL +F LE F EF +I++E+QI +LH +L
Sbjct: 782 YNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLG 841
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILT-RRGGAQISLINV 572
PH+LRR+K DV+ +P K+ELI+RVELS+ QK+YYK ILTRN+ L + GG Q+SLIN+
Sbjct: 842 PHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINI 901
Query: 573 VMELRKLCCHPY--MLEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLI 629
+MEL+K C HPY M +E P +++ L++++GK LL KM+ KLK+ GHRVLI
Sbjct: 902 IMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLI 961
Query: 630 YSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGL 689
+SQ MLD+LED+ + ++YERIDG + G +RQ IDR+NA + +F FLLSTRAGGL
Sbjct: 962 FSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGL 1021
Query: 690 GINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKK 749
GINLATADTVIIYDSDWNPH D+QA +RAHRLGQ +KVMI+R +T+GS+EER+ + KKK
Sbjct: 1022 GINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKK 1081
Query: 750 MVLEHLVV 757
M+L HLVV
Sbjct: 1082 MLLTHLVV 1089
Score = 163 (62.4 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 49 AKDDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECV--SPLNDIDKIL 106
A D C+ C E+ N++ CDTC +YHA C+ PPL P G W CP C+ P I+KIL
Sbjct: 326 ANMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQRIEKIL 385
Score = 147 (56.8 bits), Expect = 6.6e-167, Sum P(3) = 6.6e-167
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 27 ADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPP 86
A E + K + +V + ++C+ C + LM CDTCT AYH C+ ++ PP
Sbjct: 242 AALESARASKRARKEQGVVE-ENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPP 300
Query: 87 SGSWRCPEC 95
G W CP C
Sbjct: 301 EGDWSCPHC 309
Score = 131 (51.2 bits), Expect = 1.4e-168, Sum P(3) = 1.4e-168
Identities = 36/126 (28%), Positives = 65/126 (51%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLR-TKVNN-----FHRQMSSNNNAEED- 183
+++ VKWK L+Y C W+ E F + R+ KV++ F S ++++ D
Sbjct: 425 REFFVKWKYLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHSDHDP 484
Query: 184 ------FV--AIRPEWTTVDRILACRG-EDDEKEYLVKYKELSYDECYWEYE-SDISAFQ 233
F ++PEW + RI+ +++YLVK+KELSY+ WE + +DI+ ++
Sbjct: 485 YKLRERFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWERDDTDIANYE 544
Query: 234 PEIERF 239
I ++
Sbjct: 545 DAIIKY 550
Score = 74 (31.1 bits), Expect = 8.7e-09, Sum P(3) = 8.7e-09
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFI--KIQSRSHRSSCNKQKSSPQDVTE 263
E+E+ VK+K L+Y +C W E+ + + + R K+ S + S +
Sbjct: 424 EREFFVKWKYLAYWQCEWLSETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHSDHD 483
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
K + F QY PE++ +H +N L ++ S+Q +++ E+
Sbjct: 484 PYKLRERFYQYGVKPEWMQ---IHRI----INHLSYAKSQQDYLVKWKEL 526
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 31/140 (22%), Positives = 63/140 (45%)
Query: 137 WKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVN----NFHRQMSSNNNAEEDFVAIRPEWT 192
W+ L H E E K K R+R +VN N + S+ NN +++ E+
Sbjct: 1214 WEKLLKHHYEQDQETELQKLGKGK-RVRRQVNYASENMGQDWSAQNNQQQE-EDDGSEYG 1271
Query: 193 TVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCN 252
+ D + ++D +E + +E S E + ++ Q E+ F Q ++ ++
Sbjct: 1272 S-DNGELLQTDEDYEERRRRREERS--EKLPPLLAKVNG-QIEVLGFNPRQRKAFYNAVM 1327
Query: 253 KQKSSPQDVTESTKKPKEFQ 272
+ PQD+T+S+ + ++ +
Sbjct: 1328 RWGMPPQDLTQSSWQVRDLR 1347
Score = 39 (18.8 bits), Expect = 2.6e-143, Sum P(2) = 2.6e-143
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 202 GEDDEKEY--LVKYKELSYDECY-WEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP 258
G D ++E+ L+K E DE + E+ I+ ++++ K S R+S K+
Sbjct: 200 GHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKR-KAALESARAS--KRARKE 256
Query: 259 QDVTE 263
Q V E
Sbjct: 257 QGVVE 261
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 440 LKNKDSKLFSSLKQYSTRH 458
L+NK K+F + RH
Sbjct: 1346 LRNKSEKVFKAYSSLFMRH 1364
Score = 37 (18.1 bits), Expect = 5.4e-157, Sum P(3) = 5.4e-157
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 190 EWTTVDRILACRGEDDEKEYLVKYKELSYDE 220
EW+ I+ + EK ++KE+SY E
Sbjct: 366 EWSCPRCIIPEPAQRIEKILSWRWKEISYPE 396
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(3) = 4.2e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 203 EDDEKEY-LVKYKELSYDECYWE 224
+DDE E ++K D YWE
Sbjct: 1193 DDDEDETEVIKEGTEEQDPNYWE 1215
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 1339 (476.4 bits), Expect = 2.9e-168, Sum P(4) = 2.9e-168
Identities = 268/508 (52%), Positives = 347/508 (68%)
Query: 258 PQDVTESTKKPKEFQQYEHSPEFLSG-G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGL 315
P+ T KK +YE P FL G G LHPYQ+EG+N+LR+SW + ILADEMGL
Sbjct: 705 PEKPTTDLKK-----KYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL 759
Query: 316 GKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNI 373
GKTIQ++ FL SL+ G P LV PLSTL NWEREF WAP + Y+G +R +
Sbjct: 760 GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAV 819
Query: 374 IREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMI 433
IRE E F + KF+VLLTSYE+I++D+A L I W ++
Sbjct: 820 IRENELSFEEGAIRGSKVSRLRTT------QYKFNVLLTSYELISMDAACLGSIDWAVLV 873
Query: 434 VDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ 493
VDE HRLK+ SK F L Y+ +++LLTGTPLQNNL+ELF L++FL KF L+ FQ
Sbjct: 874 VDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQ 933
Query: 494 EEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT 553
EF D+++EEQ+ RLH ML PH+LRR+K DV+K +P K E I+RVELS+ QK++YK ILT
Sbjct: 934 GEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILT 993
Query: 554 RNYQIL-TRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQ---LLESSGK 609
+NY+ L ++ GG SLIN++M+L+K C HPY+ + + L +++GK
Sbjct: 994 KNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGK 1053
Query: 610 LQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDR 669
L LL KM+ +LK Q HRVLI+SQ MLD+LED+L ++++YERIDG + G RQ IDR
Sbjct: 1054 LVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDR 1113
Query: 670 FNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMI 729
FNA + +F FLLSTRAGGLGINLATADTVIIYDSDWNPH D+QA +RAHR+GQ NKVMI
Sbjct: 1114 FNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1173
Query: 730 FRLITRGSIEERMMQMTKKKMVLEHLVV 757
+R +TR S+EER+ Q+ K+KM+L HLVV
Sbjct: 1174 YRFVTRNSVEERVTQVAKRKMMLTHLVV 1201
Score = 221 (82.9 bits), Expect = 2.9e-168, Sum P(4) = 2.9e-168
Identities = 41/107 (38%), Positives = 53/107 (49%)
Query: 48 DAKDDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSP--LNDIDKI 105
D + C+ C + L+ CD+C AYH CL PPL P G WRCP C P +KI
Sbjct: 434 DEHQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTGKAEKI 493
Query: 106 LDCEMRPTVAGDSDVSKLGSKQIF--VKQYLVKWKGLSYLHCTWVPE 150
+ D + GSK V++Y +KW +SY HC WVPE
Sbjct: 494 ITWRWAQRSNDDGPSTSKGSKNSNSRVREYFIKWHNMSYWHCEWVPE 540
Score = 139 (54.0 bits), Expect = 1.2e-159, Sum P(4) = 1.2e-159
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L PP G W CP C
Sbjct: 378 DYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
Score = 115 (45.5 bits), Expect = 2.9e-168, Sum P(4) = 2.9e-168
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 174 MSSNNNAE---EDFV--AIRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYES 227
M +N++AE E F ++PEW V R++ R D YLVK++EL YD+ WE E
Sbjct: 589 MKANDDAEVLEERFYKNGVKPEWLIVQRVINHRTARDGSTMYLVKWRELPYDKSTWEEEG 648
Query: 228 D-ISAFQPEIERFIKI---------QSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHS 277
D I + I+ + + QSRS +S K + S V + +P + Y
Sbjct: 649 DDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSK--KGRKSKLKVEDDEDRP--VKHYTPP 704
Query: 278 PE 279
PE
Sbjct: 705 PE 706
Score = 60 (26.2 bits), Expect = 7.3e-154, Sum P(4) = 7.3e-154
Identities = 14/69 (20%), Positives = 30/69 (43%)
Query: 207 KEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTK 266
+EY +K+ +SY C W E + P + I+S + + + + E+
Sbjct: 521 REYFIKWHNMSYWHCEWVPEVQLDVHHP-----LMIRSFQRKYDMEEPPKFEESLDEADT 575
Query: 267 KPKEFQQYE 275
+ K Q+++
Sbjct: 576 RYKRIQRHK 584
Score = 55 (24.4 bits), Expect = 2.5e-153, Sum P(4) = 2.5e-153
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 133 YLVKWKGLSYLHCTWVPEKEFLKAFK 158
YLVKW+ L Y TW E + ++ +
Sbjct: 630 YLVKWRELPYDKSTWEEEGDDIQGLR 655
Score = 53 (23.7 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 736 GSIEERMMQMTKKKMVLEHLVVGRLKAQNINQVTIFFQTWRLLSCSVEGILE 787
G E + K+VL ++ +LKAQN ++V IF Q ++L +E LE
Sbjct: 1040 GLYEINSLTKAAGKLVLLSKMLKQLKAQN-HRVLIFSQMTKMLDI-LEDFLE 1089
Score = 43 (20.2 bits), Expect = 2.6e-139, Sum P(3) = 2.6e-139
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 243 QSRSHRSSCNKQKSSPQDV-TESTKKPKEFQQYEHSP 278
+ RS RSS N++ P D+ E+ ++ +E ++ E P
Sbjct: 218 EPRSSRSSRNEK---PDDIYEEAVEEEEEEEEEEKKP 251
Score = 40 (19.1 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 11/50 (22%), Positives = 20/50 (40%)
Query: 243 QSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLE 292
+ ++S K + + E KKP + +Q +P + G P E
Sbjct: 1579 EKEKDKTSAEKSEVKQEQEAEEDKKPGDVKQ--ENPVEEAAGDTKPSDAE 1626
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 203 EDDEKEYLVKYKELSYDECYW 223
E++E+ ++K + D YW
Sbjct: 1281 EEEEETEIIKQDAENSDPAYW 1301
Score = 37 (18.1 bits), Expect = 2.9e-168, Sum P(4) = 2.9e-168
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 6 ERLRVRSDRKPIYQLDESDDDADFEQ 31
E+ R + RK +ES++D+DF Q
Sbjct: 66 EKGRKKKKRKK----NESEEDSDFVQ 87
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 1454 (516.9 bits), Expect = 1.1e-166, Sum P(3) = 1.1e-166
Identities = 305/606 (50%), Positives = 407/606 (67%)
Query: 209 YLVKYKELSYDECYWEY-ESDISAFQP-EI----ERFIKI-QSRSHRSSCNKQKSSPQDV 261
YL+K+K+L YD+C WE E DI ++ ++ R + + + NK+ ++
Sbjct: 541 YLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKE- 599
Query: 262 TESTKKPKEFQ------QYEHSPEFL--SGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
E +KP E +++ P ++ +GG+LHPYQLEGLN+LRFSW++ T ILADEM
Sbjct: 600 -EKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEM 658
Query: 314 GLGKTIQSIAFLASLF---GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQA 370
GLGKT+Q+I FL SL+ G P+LV APLST+ NWEREF WAP VV Y G ++
Sbjct: 659 GLGKTVQTIVFLYSLYKEQGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES 718
Query: 371 RNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQ 430
R++IRE EF F + +IKF VLLTSYE+I +D A L I+W
Sbjct: 719 RSVIRENEFSFEDNAIRSGKKVFRMKK----EAQIKFHVLLTSYELITIDQAVLGSIEWA 774
Query: 431 CMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLE 490
C++VDE HRLKN SK F L Y +++LLTGTPLQNNL+ELF L++FL +F +LE
Sbjct: 775 CLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLE 834
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKA 550
F EEF DI++E+QI +LH +L PH+LRR+K DV K +P K ELI+RVELS QK+YYK
Sbjct: 835 GFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKF 894
Query: 551 ILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYM--LEGVE-PDIEDTNESFKQLLES 606
ILTRN++ L +GG Q+SL+N++M+L+K C HPY+ + VE P + + + L++S
Sbjct: 895 ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKS 954
Query: 607 SGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIR 666
SGKL LL KM+ KL++ GHRVLI+SQ MLDLLED+L ++ ++YERIDG + G RQ
Sbjct: 955 SGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA 1014
Query: 667 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNK 726
IDRFNA + +FCFLLSTRAGGLGINLATADTVIIYDSDWNPH D+QA +RAHR+GQ K
Sbjct: 1015 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK 1074
Query: 727 VMIFRLITRGSIEERMMQMTKKKMVLEHLVV--------GRLKAQNINQVTIFFQTWRLL 778
VMI+R +TR S+EER+ Q+ K+KM+L HLVV G + Q ++ + + F T L
Sbjct: 1075 VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDI-LKFGTEELF 1133
Query: 779 SCSVEG 784
VEG
Sbjct: 1134 KDDVEG 1139
Score = 269 (99.8 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 72/175 (41%), Positives = 102/175 (58%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEY-ESDISAFQP 234
EE F I+PEW + RIL D+K YL+K+K+L YD+C WE E DI P
Sbjct: 510 EERFYRYGIKPEWMMIHRIL--NHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDI----P 563
Query: 235 EIERFIKIQSRSHRSSCNKQKSSP-QDVTESTKKPKEFQ--------------QYEHSPE 279
E +K+ +HR + + P + + + KK KE + +++ P
Sbjct: 564 YYEN-LKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPW 622
Query: 280 FL--SGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER 332
++ +GG+LHPYQLEGLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E+
Sbjct: 623 YIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEQ 677
Score = 181 (68.8 bits), Expect = 8.1e-166, Sum P(2) = 8.1e-166
Identities = 41/112 (36%), Positives = 58/112 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVS---PLND-IDKILDCE 109
C+ C + L+ CDTC +YH CL PPL P+G W CP C PL + +IL
Sbjct: 348 CRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTPQCPPLKGKVQRILHWA 407
Query: 110 MR------PTV--AGDSDVSKLGSKQ---IFVKQYLVKWKGLSYLHCTWVPE 150
+ P+ A D++++ K I +++ VKW GLSY HC+WV E
Sbjct: 408 WKEPPAPLPSALPAPDAELALPLPKVLEGIPEREFFVKWAGLSYWHCSWVKE 459
Score = 139 (54.0 bits), Expect = 1.1e-166, Sum P(3) = 1.1e-166
Identities = 27/68 (39%), Positives = 34/68 (50%)
Query: 32 GKPGTTVEKFERIVRIDAKD----DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPS 87
GK G K +RI D + D C+ C + ++ CDTC AYH CL P L+ P
Sbjct: 250 GKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPE 309
Query: 88 GSWRCPEC 95
G W CP C
Sbjct: 310 GKWSCPHC 317
Score = 66 (28.3 bits), Expect = 1.1e-166, Sum P(3) = 1.1e-166
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 133 YLVKWKGLSYLHCTW------VPEKEFLKAFKSNPR 162
YL+KWK L Y CTW +P E LK N R
Sbjct: 541 YLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHR 576
Score = 58 (25.5 bits), Expect = 7.5e-166, Sum P(3) = 7.5e-166
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTEST 265
E+E+ VK+ LSY C W E + + + R + ++ S +D
Sbjct: 439 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREK 498
Query: 266 KKPKE 270
+K K+
Sbjct: 499 RKNKD 503
Score = 41 (19.5 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 7/39 (17%), Positives = 20/39 (51%)
Query: 241 KIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPE 279
K++S ++ +C ++ ++ E + +E ++ PE
Sbjct: 1534 KVESEEYQENCESKEKLKEEKQEENEGIQEKEKALEKPE 1572
Score = 40 (19.1 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
++ E+ + E+Q L R L +R++K V +++ + ELS Q EY
Sbjct: 1217 DYWEKLLRHHYEQQQEDLARNLGKG--KRIRKQVNYNDASQEDQEWQDELSDNQSEY 1271
Score = 39 (18.8 bits), Expect = 3.3e-31, Sum P(3) = 3.3e-31
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LFM H + G G+ E F D E +SR H + ++ V+K V +
Sbjct: 1367 LFM-RHLCEPGADGA-----ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE 1413
Score = 39 (18.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 461 QLELYHTVMYRNYQ 474
Score = 38 (18.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 203 EDDEKEYLVKYKELSYDECYWE 224
E+ E+E ++K +E + D YWE
Sbjct: 1201 EEVERE-IIKQEE-NVDPDYWE 1220
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 1450 (515.5 bits), Expect = 4.5e-165, Sum P(2) = 4.5e-165
Identities = 309/591 (52%), Positives = 394/591 (66%)
Query: 187 IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSR 245
++ EW + RIL + + YL+K+++L YD+ WE E D+ P+ E + K
Sbjct: 627 VKIEWLFIHRILNHSVDKKNNVHYLIKWRDLPYDQSTWESE-DMDV--PDFETY-KQHYW 682
Query: 246 SHRSSCNKQKSSP----QDV-TESTKKPKEFQ------QYEHSPEFL--SGGSLHPYQLE 292
+HR ++ P + V T++P +++ P++L +GG+LHPYQLE
Sbjct: 683 NHRELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLE 742
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWER 350
GLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV APLST+ NWER
Sbjct: 743 GLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWER 802
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF WAP M VV YVG +R +IRE EF F +KF VL
Sbjct: 803 EFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKMKKEAA----VKFHVL 858
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LTSYE+I +D A L I W C++VDE HRLKN SK F L Y +H++LLTGTPLQNN
Sbjct: 859 LTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNN 918
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR+K DV K +P
Sbjct: 919 LEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPS 978
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQIL-TRRGGAQISLINVVMELRKLCCHPYMLE-- 587
K ELI+RVELS QK+YYK ILTRN++ L TR GG Q+SL+NVVM+L+K C HPY+
Sbjct: 979 KTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPTA 1038
Query: 588 GVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
E P + + L ++SGKL LL KM+ KLKE GHRVLI+SQ MLDLLED+L
Sbjct: 1039 ATEAPKMPNGMYDGSALTKASGKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLEN 1098
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+ ++YERIDG V G RQ IDRFNA + +F FLLSTRAGGLGINLATADTVIIYDSDW
Sbjct: 1099 EGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDW 1158
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
NPH D+QA +RAHR+GQ KVMI+R +T+ S+EER+ Q+ KKKM+L HLVV
Sbjct: 1159 NPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVV 1209
Score = 178 (67.7 bits), Expect = 4.5e-165, Sum P(2) = 4.5e-165
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 47 IDAKDDS----CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSP--LN 100
++ +DD C+ C + L+ CDTC +YH CL PPL P+G W CP C+SP
Sbjct: 449 VEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRCLSPPLKG 508
Query: 101 DIDKILDC---EMRPT--VAGDSDVSK--------LGSKQIFVKQYLVKWKGLSYLHCTW 147
+ K+L E P V +D+ +G K+ +++ VKW SY HC+W
Sbjct: 509 KVQKVLTWRWGEAPPPMPVPRPADLPAEAPDPPPMIGRKE---REFFVKWCNKSYWHCSW 565
Query: 148 VPE 150
V E
Sbjct: 566 VQE 568
Score = 131 (51.2 bits), Expect = 3.6e-164, Sum P(3) = 3.6e-164
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P ++ P G+W CP C
Sbjct: 376 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHC 419
Score = 54 (24.1 bits), Expect = 3.6e-164, Sum P(3) = 3.6e-164
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y TW E
Sbjct: 650 YLIKWRDLPYDQSTWESE 667
Score = 53 (23.7 bits), Expect = 7.3e-152, Sum P(2) = 7.3e-152
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 149 PEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKE 208
P+ + KA K P L+ K+ NF R+ SS+ E+D + ++ D + K+
Sbjct: 296 PQDKKSKAKKVAP-LKIKLGNFKRKRSSSGE-EDDGESDFDSFSVSDGSNSRSSRSKNKK 353
Query: 209 YLVKYKELSYDECYWEYESD 228
K+ DE YE+D
Sbjct: 354 AKSSKKKKKMDEDADGYETD 373
Score = 50 (22.7 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 22/70 (31%), Positives = 30/70 (42%)
Query: 170 FHRQMSSNNNAEEDFVAIRPEWTTVDRILACRG---EDDE----KEYLVKYKELSY---D 219
F ++ +N EED I + +DR+L ED E EYL +K Y D
Sbjct: 1237 FKDELGEGDNKEEDSSVIHYDDKAIDRLLDRNQDATEDTELQSMNEYLSSFKVAQYVVKD 1296
Query: 220 ECYWEYESDI 229
E E E D+
Sbjct: 1297 ED--EEEEDV 1304
Score = 48 (22.0 bits), Expect = 1.6e-163, Sum P(3) = 1.6e-163
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 206 EKEYLVKYKELSYDECYWEYE 226
E+E+ VK+ SY C W E
Sbjct: 548 EREFFVKWCNKSYWHCSWVQE 568
Score = 45 (20.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 172 RQMSSNNNAEEDF-VAIRPEWTTVDRIL--ACRGEDDEKE----YLVKYKELSYDECYWE 224
R + N +A ED + E+ + ++ + ED+E+E ++K +E S D YWE
Sbjct: 1263 RLLDRNQDATEDTELQSMNEYLSSFKVAQYVVKDEDEEEEDVDREIIKQEE-SVDPDYWE 1321
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 482 DAGKFGSLEEFQEEFKD-INQEEQISRLH 509
D KFG+ + F++E + N+EE S +H
Sbjct: 1227 DILKFGTEQLFKDELGEGDNKEEDSSVIH 1255
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 1594 (566.2 bits), Expect = 9.0e-164, P = 9.0e-164
Identities = 329/723 (45%), Positives = 455/723 (62%)
Query: 51 DDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPLNDIDKILDCEM 110
++ C+ C + +L+ CD+C YH CL PPLK+ P G W CP C+ +KIL
Sbjct: 35 EEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCIPLPGKAEKILSWRW 94
Query: 111 RPTVAGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFL---KAFKSNPRLRTKV 167
+ + SK G K+ ++Y +KW G+SY HC W+PE + L + ++ + R+ +
Sbjct: 95 ALDRSVELRTSK-GEKR---REYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSDM 150
Query: 168 N--NFHRQMSSNNNAEEDFV--AIRPEWTTVDRILACRGEDDEKE-YLVKYKELSYDECY 222
+ + N E F I+PEW V R++ E + YLVK++ELSY++
Sbjct: 151 EEPSLEELDDQDGNLHERFYRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSS 210
Query: 223 WEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFL- 281
WE ESD P + + I + + S+ +Q+ P + KK YE P FL
Sbjct: 211 WERESDSI---PGLNQAIALYKKLRSSNKGRQRDRPAPTIDLNKK------YEDQPVFLK 261
Query: 282 -SGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLV 338
+G LHP+Q+EG+++LR+SW + ILADEMGLGKTIQ++ FL SLF G P L+
Sbjct: 262 EAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLI 321
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
PLSTL NWERE WAP++ V YVG AR +IR++E F
Sbjct: 322 SVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMREN------ 375
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
Q + KF+V+LTSYE I++D+A L I W ++VDE HRL++ SK F L +Y +
Sbjct: 376 ---QTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGY 432
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
++LLTGTPLQNNL+ELF L++FL +GKF L+ FQ EF D+++EEQ+ RLH +L PH+LR
Sbjct: 433 KLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLR 492
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQI-SLINVVMELR 577
R+K DV+K +PPK E I+RVELSS QK++YK ILT+N++ L ++GG ++ SL+N++M+LR
Sbjct: 493 RLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLR 552
Query: 578 KLCCHPYMLEGV--EPDIEDTN-ESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQ 634
K C HPY+ E I + L ++SGKL LL KM+ +LK HRVL++SQ
Sbjct: 553 KCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMT 612
Query: 635 HMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLA 694
ML++LE +L + +QY+RIDG + G RQ IDRFN S F FLLSTRAGGLGINLA
Sbjct: 613 KMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLA 672
Query: 695 TADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEH 754
TADTVII+DSDWNPH D+QA +RAHR+GQ KVMI+R +T S+EER+MQ+ K KM+L H
Sbjct: 673 TADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTH 732
Query: 755 LVV 757
LVV
Sbjct: 733 LVV 735
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 1380 (490.8 bits), Expect = 7.7e-159, Sum P(2) = 7.7e-159
Identities = 289/566 (51%), Positives = 378/566 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYES-DI------- 229
EE F I+PEW + RIL + + YL+K+K+L YD+C WE + DI
Sbjct: 579 EERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLK 638
Query: 230 SAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGG 284
A+ E + +R + K K D E T +++ P ++ +GG
Sbjct: 639 QAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGG 698
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPL 342
+LHPYQLEGLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APL
Sbjct: 699 TLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 758
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQ 402
ST+ NWEREF WAP VV Y G ++R++IRE EF F +
Sbjct: 759 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----E 814
Query: 403 DRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLL 462
+IKF VLLTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LL
Sbjct: 815 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 874
Query: 463 TGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKK 522
TGTPLQNNL+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K
Sbjct: 875 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKA 934
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K +P K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C
Sbjct: 935 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCN 994
Query: 582 HPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLD 638
HPY+ + VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLD
Sbjct: 995 HPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLD 1054
Query: 639 LLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
LLED+L ++ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADT
Sbjct: 1055 LLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT 1114
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQT 724
VIIYDSDWNPH D+QA +RAHR+GQT
Sbjct: 1115 VIIYDSDWNPHNDIQAFSRAHRIGQT 1140
Score = 189 (71.6 bits), Expect = 7.7e-159, Sum P(2) = 7.7e-159
Identities = 48/145 (33%), Positives = 68/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 393 QWEPKDDDDEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 443
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D + S K
Sbjct: 444 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPSLPPPKPL 503
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPE 150
I +++ VKW GLSY HC+WV E
Sbjct: 504 EGIPEREFFVKWAGLSYWHCSWVKE 528
Score = 132 (51.5 bits), Expect = 4.7e-158, Sum P(3) = 4.7e-158
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 65 (27.9 bits), Expect = 4.7e-158, Sum P(3) = 4.7e-158
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 610 YLIKWKDLPYDQCTW 624
Score = 56 (24.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 508 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 540
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 530 QLELYHTVMYRNYQ 543
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 1378 (490.1 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
Identities = 290/568 (51%), Positives = 379/568 (66%)
Query: 181 EEDFV--AIRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYES-DI------- 229
EE F I+PEW + RIL + + YL+K+K+L YD+C WE + DI
Sbjct: 553 EERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLK 612
Query: 230 SAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTES---TKKPKEFQQYEHSPEFL--SGG 284
A+ E + +R + K K D E T +++ P ++ +GG
Sbjct: 613 QAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGG 672
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPL 342
+LHPYQLEGLN+LRFSW++ T ILADEMGLGKT+Q+I FL SL+ E S P+LV APL
Sbjct: 673 TLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 732
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQ 402
ST+ NWEREF WAP VV Y G ++R++IRE EF F +
Sbjct: 733 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK----E 788
Query: 403 DRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLL 462
+IKF VLLTSYE+I +D A L I+W C++VDE HRLKN SK F L Y +++LL
Sbjct: 789 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 848
Query: 463 TGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKK 522
TGTPLQNNL+ELF L++FL +F +LE F EEF DI++E+QI +LH +L PH+LRR+K
Sbjct: 849 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKA 908
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K +P K ELI+RVELS QK+YYK ILTRN++ L +GG Q+SL+N++M+L+K C
Sbjct: 909 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCN 968
Query: 582 HPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLD 638
HPY+ + VE P + + + L++SSGKL LL KM+ KL+++GHRVLI+SQ MLD
Sbjct: 969 HPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLD 1028
Query: 639 LLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
LLED+L ++ ++YERIDG + G RQ IDRFNA + +FCFLLSTRAGGLGINLATADT
Sbjct: 1029 LLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT 1088
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNK 726
VIIYDSDWNPH D+QA +RAHR+GQ NK
Sbjct: 1089 VIIYDSDWNPHNDIQAFSRAHRIGQ-NK 1115
Score = 185 (70.2 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
Identities = 47/145 (32%), Positives = 67/145 (46%)
Query: 19 QLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCL 78
Q + DDD + E+G G E+ + + + C+ C + L+ CD C +YH CL
Sbjct: 367 QWEPKDDDDEEEEG--GCEEEEDDHM-------EFCRVCKDGGELLCCDACPSSYHLHCL 417
Query: 79 VPPLKAPPSGSWRCPECVSP--LNDIDKILDCEMR----PTVAG----DSDVSKLGSKQ- 127
PPL P+G W CP C P + +IL P + G D + K
Sbjct: 418 NPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGVPPPKPL 477
Query: 128 --IFVKQYLVKWKGLSYLHCTWVPE 150
I +++ VKW GLSY HC+WV E
Sbjct: 478 EGIPEREFFVKWAGLSYWHCSWVKE 502
Score = 132 (51.5 bits), Expect = 7.7e-158, Sum P(3) = 7.7e-158
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P L+ P G W CP C
Sbjct: 318 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 361
Score = 65 (27.9 bits), Expect = 7.7e-158, Sum P(3) = 7.7e-158
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 133 YLVKWKGLSYLHCTW 147
YL+KWK L Y CTW
Sbjct: 584 YLIKWKDLPYDQCTW 598
Score = 56 (24.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIER 238
E+E+ VK+ LSY C W E + + + R
Sbjct: 482 EREFFVKWAGLSYWHCSWVKELQLELYHTVMYR 514
Score = 39 (18.8 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 544 QKEYYKAILTRNYQ 557
Q E Y ++ RNYQ
Sbjct: 504 QLELYHTVMYRNYQ 517
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 1366 (485.9 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 287/601 (47%), Positives = 387/601 (64%)
Query: 171 HRQMSSNNNA--EEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESD 228
HR ++ + A ++D++ +W + A DD + Y+E YW++
Sbjct: 492 HRIINHQSYAKSQQDYLV---KWKELSYDQATWERDDSN--IANYEEAIIK--YWQHRE- 543
Query: 229 ISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEF----QQYEHSPEFLS-- 282
S +I + ++ HR + K P E KK +E ++YE P++++
Sbjct: 544 -SKLNEDIPKNVQKMIAKHREA----KGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTET 598
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVA 340
GG LHPYQLEGLN+LR WS T ILADEMGLGKT+QS+ FL SL G P L+ A
Sbjct: 599 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 658
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWERE W P VV YVG AR ++RE+EF F
Sbjct: 659 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTT-- 716
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+ +KF VLLTSYE IN+D L I+W ++VDE HRLKN S F +L +Y+ +RV
Sbjct: 717 --ENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRV 774
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F LE F EF +I++E+QI +LH +L PH+LRR+
Sbjct: 775 LLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRL 834
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILT-RRGGAQISLINVVMELRKL 579
K DV+ +P K ELI+RVELS+ QK++YK ILTRN+ L + GG Q+SL+NV+MEL+K
Sbjct: 835 KADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKC 894
Query: 580 CCHPYMLEGVEPDI-EDTNESFK--QLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ E + ++ N ++ L+++SGK LL KM+ KLK+ GHRVLI+SQ M
Sbjct: 895 CNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRM 954
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD++ED ++ ++YERIDG + G RQ IDR+NA + +F FLLSTRAGGLGINLATA
Sbjct: 955 LDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATA 1014
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHRLGQ +KVMI+R +T+ S+EE++ + KKKM+L HLV
Sbjct: 1015 DTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLV 1074
Query: 757 V 757
V
Sbjct: 1075 V 1075
Score = 192 (72.6 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 46/117 (39%), Positives = 65/117 (55%)
Query: 51 DDSCQACGESENLMSCDTCTYAYHAKCLVPPL-KAPPSGSWRCPEC--VSPLNDIDKILD 107
D+ C+ C E+ENL+ CD+C ++HA C+ PPL + P +W CP C V P + I+KIL
Sbjct: 317 DEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKIL- 375
Query: 108 C----EM---RPTVAG---DSDVSKLGSKQIFV----KQYLVKWKGLSYLHCTWVPE 150
C E+ P AG SD + L + +++ VKWK LSY C+WV E
Sbjct: 376 CWRWKEIPYPEPLEAGKEASSDDAMLKPPRKMEPRREREFFVKWKYLSYWQCSWVSE 432
Score = 158 (60.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 49/157 (31%), Positives = 76/157 (48%)
Query: 131 KQYLVKWKGLSYLHCTWVPEK----EF----LKAFKSN-----PRLRTKVNNFHRQMSSN 177
+++ VKWK LSY C+WV E F L ++ N P V + H +
Sbjct: 413 REFFVKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDP 472
Query: 178 NNAEEDFV--AIRPEWTTVDRILACRG-EDDEKEYLVKYKELSYDECYWEYE-SDISAFQ 233
E F I+PEW + RI+ + +++YLVK+KELSYD+ WE + S+I+ ++
Sbjct: 473 YKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYE 532
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE 270
E IK HR S + P++V + K +E
Sbjct: 533 ---EAIIKYWQ--HRES-KLNEDIPKNVQKMIAKHRE 563
Score = 126 (49.4 bits), Expect = 1.1e-150, Sum P(2) = 1.1e-150
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 51 DDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECV 96
+D C+ C + L+ CDTC AYH C+ ++ PP G W C C+
Sbjct: 256 NDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCI 301
Score = 45 (20.9 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ 254
E++E+ ++K E D YWE + E +R I++Q KQ
Sbjct: 1181 EEEEETEVIKEDEKEPDPDYWE---KLLKHHYEQDREIELQKLGKGKRVRKQ 1229
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHP 288
PEI+ + + ++ S+ +S+P+ E ++P E E + E ++G + P
Sbjct: 1405 PEIQDEV-LAKAANGSAQGSSRSTPKPKEEPKEEPME---KEDATETVNGATSEP 1455
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 1366 (485.9 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 287/601 (47%), Positives = 387/601 (64%)
Query: 171 HRQMSSNNNA--EEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESD 228
HR ++ + A ++D++ +W + A DD + Y+E YW++
Sbjct: 492 HRIINHQSYAKSQQDYLV---KWKELSYDQATWERDDSN--IANYEEAIIK--YWQHRE- 543
Query: 229 ISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEF----QQYEHSPEFLS-- 282
S +I + ++ HR + K P E KK +E ++YE P++++
Sbjct: 544 -SKLNEDIPKNVQKMIAKHREA----KGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTET 598
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF--GERISPHLVVA 340
GG LHPYQLEGLN+LR WS T ILADEMGLGKT+QS+ FL SL G P L+ A
Sbjct: 599 GGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAA 658
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
PLST+ NWERE W P VV YVG AR ++RE+EF F
Sbjct: 659 PLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTT-- 716
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
+ +KF VLLTSYE IN+D L I+W ++VDE HRLKN S F +L +Y+ +RV
Sbjct: 717 --ENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRV 774
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRV 520
LLTGTPLQNNL+ELF L++FL +F LE F EF +I++E+QI +LH +L PH+LRR+
Sbjct: 775 LLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRL 834
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILT-RRGGAQISLINVVMELRKL 579
K DV+ +P K ELI+RVELS+ QK++YK ILTRN+ L + GG Q+SL+NV+MEL+K
Sbjct: 835 KADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKC 894
Query: 580 CCHPYMLEGVEPDI-EDTNESFK--QLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
C HPY+ E + ++ N ++ L+++SGK LL KM+ KLK+ GHRVLI+SQ M
Sbjct: 895 CNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRM 954
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD++ED ++ ++YERIDG + G RQ IDR+NA + +F FLLSTRAGGLGINLATA
Sbjct: 955 LDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATA 1014
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTVIIYDSDWNPH D+QA +RAHRLGQ +KVMI+R +T+ S+EE++ + KKKM+L HLV
Sbjct: 1015 DTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLV 1074
Query: 757 V 757
V
Sbjct: 1075 V 1075
Score = 192 (72.6 bits), Expect = 1.1e-157, Sum P(2) = 1.1e-157
Identities = 46/117 (39%), Positives = 65/117 (55%)
Query: 51 DDSCQACGESENLMSCDTCTYAYHAKCLVPPL-KAPPSGSWRCPEC--VSPLNDIDKILD 107
D+ C+ C E+ENL+ CD+C ++HA C+ PPL + P +W CP C V P + I+KIL
Sbjct: 317 DEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRCETVKPEHKIEKIL- 375
Query: 108 C----EM---RPTVAG---DSDVSKLGSKQIFV----KQYLVKWKGLSYLHCTWVPE 150
C E+ P AG SD + L + +++ VKWK LSY C+WV E
Sbjct: 376 CWRWKEIPYPEPLEAGKEASSDDAMLKPPRKMEPRREREFFVKWKYLSYWQCSWVSE 432
Score = 158 (60.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 49/157 (31%), Positives = 76/157 (48%)
Query: 131 KQYLVKWKGLSYLHCTWVPEK----EF----LKAFKSN-----PRLRTKVNNFHRQMSSN 177
+++ VKWK LSY C+WV E F L ++ N P V + H +
Sbjct: 413 REFFVKWKYLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDP 472
Query: 178 NNAEEDFV--AIRPEWTTVDRILACRG-EDDEKEYLVKYKELSYDECYWEYE-SDISAFQ 233
E F I+PEW + RI+ + +++YLVK+KELSYD+ WE + S+I+ ++
Sbjct: 473 YKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYE 532
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE 270
E IK HR S + P++V + K +E
Sbjct: 533 ---EAIIKYWQ--HRES-KLNEDIPKNVQKMIAKHRE 563
Score = 126 (49.4 bits), Expect = 1.1e-150, Sum P(2) = 1.1e-150
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 51 DDSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECV 96
+D C+ C + L+ CDTC AYH C+ ++ PP G W C C+
Sbjct: 256 NDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCI 301
Score = 45 (20.9 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ 254
E++E+ ++K E D YWE + E +R I++Q KQ
Sbjct: 1181 EEEEETEVIKEDEKEPDPDYWE---KLLKHHYEQDREIELQKLGKGKRVRKQ 1229
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHP 288
PEI+ + + ++ S+ +S+P+ E ++P E E + E ++G + P
Sbjct: 1405 PEIQDEV-LAKAANGSAQGSSRSTPKPKEEPKEEPME---KEDATETVNGATSEP 1455
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 301/596 (50%), Positives = 397/596 (66%)
Query: 218 YDECYWEYES-DI-------SAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTES---TK 266
YD+C WE + DI A+ E + +R + K K D E T
Sbjct: 2 YDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTP 61
Query: 267 KPKEFQQYEHSPEFL--SGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAF 324
+++ P ++ +GG+LHPYQLEGLN+LRFSW++ T ILADEMGLGKT+Q+I F
Sbjct: 62 IVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVF 121
Query: 325 LASLFGERIS--PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFP 382
L SL+ E S P+LV APLST+ NWEREF WAP VV Y G ++R++IRE EF F
Sbjct: 122 LYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFE 181
Query: 383 XXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKN 442
+ +IKF VLLTSYE+I +D A L I+W C++VDE HRLKN
Sbjct: 182 DNAIRSGKKVFRMKK----EVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKN 237
Query: 443 KDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQE 502
SK F L Y +++LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI++E
Sbjct: 238 NQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKE 297
Query: 503 EQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRR 562
+QI +LH +L PH+LRR+K DV K +P K ELI+RVELS QK+YYK ILTRN++ L +
Sbjct: 298 DQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK 357
Query: 563 GGA-QISLINVVMELRKLCCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMV 618
GG Q+SL+N++M+L+K C HPY+ + VE P + + + L++SSGKL LL KM+
Sbjct: 358 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 417
Query: 619 KLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRF 678
KL+++GHRVLI+SQ MLDLLED+L ++ ++YERIDG + G RQ IDRFNA + +F
Sbjct: 418 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 477
Query: 679 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSI 738
CFLLSTRAGGLGINLATADTVIIYDSDWNPH D+QA +RAHR+GQ KVMI+R +TR S+
Sbjct: 478 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 537
Query: 739 EERMMQMTKKKMVLEHLVV--------GRLKAQNINQVTIFFQTWRLLSCSVEGIL 786
EER+ Q+ K+KM+L HLVV G + Q ++ + + F T L VEG++
Sbjct: 538 EERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDI-LKFGTEELFKDDVEGMM 592
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 1272 (452.8 bits), Expect = 3.2e-146, Sum P(2) = 3.2e-146
Identities = 294/606 (48%), Positives = 375/606 (61%)
Query: 181 EEDFV--AIRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYES-DISAFQP 234
EE F I+PEW + RIL D+K YL+K+++L YD+ WE E DI +
Sbjct: 579 EERFYRYGIKPEWMMIHRIL--NHSVDKKGNVHYLIKWRDLPYDQASWESEDVDIQDYD- 635
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTK-----KPKEFQ------QYEHSPEFL-- 281
K +HR ++ P + K +P E +Y+ PE+L
Sbjct: 636 ----LYKQAYWNHRELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDV 691
Query: 282 SGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVV 339
+GG+LHPYQLEGLN+LRFSW++ T ILADEMGLGKT+Q+ FL SL+ E S P LV
Sbjct: 692 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVS 751
Query: 340 APLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXX 399
APLST+ NWEREF WAP M VV YVG +R IIRE EF F
Sbjct: 752 APLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEA 811
Query: 400 XXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHR 459
+KF VLLTSYE+I +D A L I W C+IVDE HRLKN SK F L YS +H+
Sbjct: 812 A----VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHK 867
Query: 460 VLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRR 519
+LLTGTPLQNNL+ELF L++FL +F +LE F EEF DI +E+QI +LH ML PH+LRR
Sbjct: 868 LLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRR 927
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRK 578
+K DV K +P K ELI+RVELS QK+YYK ILTRN++ L RGG Q+SL+NVVM+L+K
Sbjct: 928 LKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKK 987
Query: 579 LCCHPYM--LEGVE-PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQH 635
C HPY+ + +E P + + L+ +SGKL LL KM+ LKE GHRVLI+SQ
Sbjct: 988 CCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTK 1047
Query: 636 MLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGG--LGINL 693
MLDLLED+L + ++YERIDG + G RQ IDRFNA + FCFLLSTRAGG L L
Sbjct: 1048 MLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQGFCFLLSTRAGGPCLWSPL 1107
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMM--QMTKKKMV 751
+++ + DS + + +RAHRLGQ KV R +T+ SI R Q+ +K+M+
Sbjct: 1108 RSSERNV--DSSLSRKTMQKTYSRAHRLGQNKKVNDIRFVTK-SISGRSASSQVAQKEMM 1164
Query: 752 LEHLVV 757
L HLVV
Sbjct: 1165 LTHLVV 1170
Score = 191 (72.3 bits), Expect = 3.2e-146, Sum P(2) = 3.2e-146
Identities = 40/109 (36%), Positives = 56/109 (51%)
Query: 54 CQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPL--NDIDKILDCEM- 110
C+ C + L+ CD C +YH CL PPL P+G W CP C P + KIL +
Sbjct: 422 CRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKILIWKWG 481
Query: 111 RPTVAG------DSDVSKLGSKQIF---VKQYLVKWKGLSYLHCTWVPE 150
+P V D+D + K + +Q+ VKW+G+SY HC+WV E
Sbjct: 482 QPPVGPVPPRPPDADPNAPPPKPLEGRPERQFFVKWQGMSYWHCSWVSE 530
Score = 130 (50.8 bits), Expect = 7.2e-143, Sum P(3) = 7.2e-143
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 52 DSCQACGESENLMSCDTCTYAYHAKCLVPPLKAPPSGSWRCPEC 95
D C+ C + ++ CDTC AYH CL P ++ P G W CP C
Sbjct: 341 DYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 384
Score = 51 (23.0 bits), Expect = 7.2e-143, Sum P(3) = 7.2e-143
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 133 YLVKWKGLSYLHCTWVPE 150
YL+KW+ L Y +W E
Sbjct: 610 YLIKWRDLPYDQASWESE 627
Score = 47 (21.6 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 202 GEDDEKEYLVKYKELSYDECYWE 224
GE++E E + +E S D YWE
Sbjct: 1262 GEEEEVEREIIKQEESVDPDYWE 1284
Score = 40 (19.1 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 224 EYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPE 279
E E ++SA + E ++ Q + ++ SP + TE+ +K +E + E + E
Sbjct: 1549 EPEKELSASANDTEVPME-QCAQPAETAPQEAKSPVNSTEADEKKEEPEVKERTDE 1603
Score = 39 (18.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 290 QLEGLNFLRFSWSKQTHVILADEMG 314
+L+G+N S+ +V+ +EMG
Sbjct: 1238 ELQGMNEYLSSFKVAQYVVREEEMG 1262
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 1328 (472.5 bits), Expect = 2.9e-145, Sum P(3) = 2.9e-145
Identities = 265/524 (50%), Positives = 367/524 (70%)
Query: 252 NKQKSSPQDVTESTKKPKE--FQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVIL 309
N Q + + T S KK + F + + P ++S G+L YQ+EGLN+L SW T+VIL
Sbjct: 719 NNQNAPMKANTISAKKRLDQGFTKLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVIL 778
Query: 310 ADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGT 367
ADEMGLGKTIQ+I+FL+ LF E+ P LVV PLST+ NW+REFA WAP MNV++Y GT
Sbjct: 779 ADEMGLGKTIQTISFLSYLFNEQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGT 838
Query: 368 SQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPI 427
Q+R+IIR YEFY + ++ F+VLLT+Y+ I D +L I
Sbjct: 839 GQSRDIIRLYEFY---------------TTNRLGKKKLNFNVLLTTYDFILKDKNTLGTI 883
Query: 428 KWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFG 487
KW+ + VDE HRLKN +S L LK Y+T +R+L+TGTPLQN+L EL+ L++FL KF
Sbjct: 884 KWEFLAVDEAHRLKNSESVLHEVLKLYNTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFT 943
Query: 488 SLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEY 547
SL++FQ+++ D+ + +QI++LH +L PHLLRR+KKDV K LPPK E ILRV+LS+ QK+Y
Sbjct: 944 SLKDFQDQYSDLKENDQIAQLHSVLKPHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKY 1003
Query: 548 YKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIE-DTNESFKQLLES 606
YK ILT+N+Q L + G + +L+N++ EL+K C HPY+ + + E + ++ +
Sbjct: 1004 YKWILTKNFQELNKGKGEKTTLLNIMTELKKTCNHPYLYQNARDECELGAKDLLDSMIRA 1063
Query: 607 SGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIR 666
SGKL LLDK++++LKE GHRVLI+SQ MLD+L DYL + +Q++R+DG + +R
Sbjct: 1064 SGKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQA 1123
Query: 667 IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNK 726
+DRFNA +S FCFLLST+AGGLGINL+TADTVII+DSDWNP DLQA ARAHR+GQ N
Sbjct: 1124 MDRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNH 1183
Query: 727 VMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL-KAQNINQVT 769
V I+RL+++ S+EE +++ K+KMVL+HLV+ + K+Q T
Sbjct: 1184 VNIYRLVSKSSVEEDILERAKQKMVLDHLVIQTMEKSQTAKSNT 1227
Score = 440 (159.9 bits), Expect = 2.4e-41, Sum P(4) = 2.4e-41
Identities = 87/175 (49%), Positives = 123/175 (70%)
Query: 208 EYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKK 267
+YLVK+K L+Y E WEY DI+ FQ EI+ F+ I+ ++++++ K + ++ +
Sbjct: 682 QYLVKWKVLAYSEVTWEYPEDIAEFQTEIDTFL-IRQQNNQNAPMKANT----ISAKKRL 736
Query: 268 PKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLAS 327
+ F + + P ++S G+L YQ+EGLN+L SW T+VILADEMGLGKTIQ+I+FL+
Sbjct: 737 DQGFTKLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSY 796
Query: 328 LFGERI--SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFY 380
LF E+ P LVV PLST+ NW+REFA WAP MNV++Y GT Q+R+IIR YEFY
Sbjct: 797 LFNEQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFY 851
Score = 105 (42.0 bits), Expect = 2.9e-145, Sum P(3) = 2.9e-145
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 102 IDKILDCEMRPTVAGDSDVSKLGSKQIF-VKQY--LVKWKGLSYLHCTWVPEKEFLKAFK 158
I+KILD ++ D S+ +IF V+ Y LVKWKG +Y+H TW E L FK
Sbjct: 535 IEKILDHRLK------KDCSE-NEPEIFNVEDYEFLVKWKGWAYIHNTW-DAYESLNNFK 586
Query: 159 SNPRLRTKV----NNFH-RQMSSNNNAEEDFVA---IRPE---WTTVDRILACRGEDDEK 207
N +L+ V +N RQ +S + E+ + ++ E +T V+R++A R +
Sbjct: 587 GNKKLQNYVKGILDNIQWRQEASKEDIEQADITKELMKQEIQDYTIVERVIAQREVAQSR 646
Query: 208 EYLV 211
+ +V
Sbjct: 647 DQIV 650
Score = 71 (30.1 bits), Expect = 1.1e-141, Sum P(3) = 1.1e-141
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 205 DEKEYLVKYKELSYDECYWE-YESDISAFQ--PEIERFIK--IQSRSHRSSCNKQKSSPQ 259
++ E+LVK+K +Y W+ YES ++ F+ +++ ++K + + R +K+
Sbjct: 558 EDYEFLVKWKGWAYIHNTWDAYES-LNNFKGNKKLQNYVKGILDNIQWRQEASKEDIEQA 616
Query: 260 DVTESTKKPKEFQQY 274
D+T+ K +E Q Y
Sbjct: 617 DITKELMK-QEIQDY 630
Score = 69 (29.3 bits), Expect = 1.8e-141, Sum P(3) = 1.8e-141
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 132 QYLVKWKGLSYLHCTW-VPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA 180
QYLVKWK L+Y TW PE + F+ T+++ F + +N NA
Sbjct: 682 QYLVKWKVLAYSEVTWEYPED--IAEFQ------TEIDTFLIRQQNNQNA 723
Score = 38 (18.4 bits), Expect = 2.9e-145, Sum P(3) = 2.9e-145
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 21 DESDDDADFEQGK 33
+ES+ D+D+E K
Sbjct: 363 EESESDSDYEPNK 375
Score = 37 (18.1 bits), Expect = 2.4e-41, Sum P(4) = 2.4e-41
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 485 KFGSLEEFQEEFKDINQEEQI 505
KFG+ E F+E ++ N E++
Sbjct: 1244 KFGAEELFKETGEEANPIEEM 1264
Score = 37 (18.1 bits), Expect = 2.4e-41, Sum P(4) = 2.4e-41
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 491 EFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKA 550
E EE + + + + L+P ++ + ++ + L K I R E SK K+Y +
Sbjct: 1769 ESDEEDDKYYDKNLLRKCQQYLSP--IKELLEN-FRSLSDSKVQISREEKVSKTKKYLLS 1825
Query: 551 ILTRNYQILTRRGGAQI 567
+ IL + A I
Sbjct: 1826 LGKEISIILDEKKSANI 1842
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 1376 (489.4 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 298/656 (45%), Positives = 422/656 (64%)
Query: 132 QYLVKWKGLSYLHCTW--VPEKEFLKAFKSNPRLRTKVNNFHR--------QMSSNNNAE 181
++L+KWKG S+LHC W + + + L FK KV R ++ N+ ++
Sbjct: 463 EFLIKWKGQSHLHCQWKTLSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSK 522
Query: 182 EDFVAIRPEWTTVDRILACRGEDDE-----KEYLVKYKELSYDECYWEYESDISAFQPEI 236
E + I + + V+RI+A R D EYLVK++ LSY E WE + DI+ Q I
Sbjct: 523 EMDLDIIKQNSQVERIIADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAI 582
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNF 296
+ + ++ S Q + + TK ++ + PE+L GG+L YQLEGLNF
Sbjct: 583 DEY-----KAREVSIAVQGKMVEQ--QRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNF 635
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG-ERI-SPHLVVAPLSTLRNWEREFAT 354
L SW T+VILADEMGLGKT+QS++ L L ++I P LVV PLSTL NW +EF
Sbjct: 636 LVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRK 695
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W P MN+++YVGT +R + ++YEFY IKF+ LLT+Y
Sbjct: 696 WLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRP----------------IKFNALLTTY 739
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
E++ D A L IKW ++VDE HRLKN +++L+++L ++ST++++L+TGTPLQN+++EL
Sbjct: 740 EVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEEL 799
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQ--EEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
+ L+HFLD GKF + +EF E +K+++ E +++ LH L PH+LRRV KDV K LPPK
Sbjct: 800 WALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKI 859
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTRR-GGAQISLINVVMELRKLCCHPYMLE---- 587
E ILRVE+S QK+YYK IL RN+ L + G Q+SL+N+V+EL+K C HP++ E
Sbjct: 860 ERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADH 919
Query: 588 GVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
G DI D N +++ SSGKL +LDK++V+L+E HRVLI+SQ MLD+L +YL+ +
Sbjct: 920 GYGGDIND-NSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLR 978
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
+Q++R+DG RQ +D FNA S FCFLLSTRAGGLGINLATADTV+I+DSDWN
Sbjct: 979 GFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWN 1038
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQ 763
P DLQAM+RAHR+GQ V I+R +T S+EE +++ K+KMVL+HLV+ +L A+
Sbjct: 1039 PQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAE 1094
Score = 45 (20.9 bits), Expect = 3.4e-143, Sum P(2) = 3.4e-143
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 11 RSDRKPIYQLDESDDDA--DFEQG-----KPGTTVEK 40
R RK YQ D+S++D+ D ++G + GTT+ +
Sbjct: 329 RQKRKTSYQDDDSEEDSENDNDEGFRSLARRGTTLRQ 365
Score = 43 (20.2 bits), Expect = 5.5e-143, Sum P(2) = 5.5e-143
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 7 RLRVRSDRKPIYQLDESDDDADFEQGK 33
R RS RK Y ES+D D + GK
Sbjct: 381 RSSTRSVRKVSYV--ESEDSEDIDDGK 405
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 1375 (489.1 bits), Expect = 6.0e-140, Sum P(3) = 6.0e-140
Identities = 291/657 (44%), Positives = 406/657 (61%)
Query: 128 IFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFV-- 185
I V++Y VK++ SYLHC W E+E LK + R+ K+ F ++ S N E+
Sbjct: 1877 IDVEEYFVKYRNFSYLHCEWRTEEELLKGDR---RVAAKIRRFQQKQSQQLNIFENIEDE 1933
Query: 186 AIRPEWTTVDRILACRGEDDE------KEYLVKYKELSYDECYWEYESDISAFQPEIERF 239
++T VDR+L DE K YLVK+K L Y++C WE E D+ +IE++
Sbjct: 1934 PFNQDFTEVDRVLDMSVHTDETSGETTKHYLVKWKSLPYEDCTWELEEDVD--NDKIEQY 1991
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
++ RS K K P P+ +++ E +P + G SL PYQLEGLN+L+F
Sbjct: 1992 LRFNKIPQRSEW-KSKKRPH--------PELWKKLEKTPVYKGGNSLRPYQLEGLNWLKF 2042
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
SW + ILADEMGLGKTIQS+ F+ S++ I P LV+APLST+ NW+REF W
Sbjct: 2043 SWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWT-D 2101
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
MNVV+Y G+ ++ +I++YE+Y+ ++ IKF+VL+T++EMI
Sbjct: 2102 MNVVVYHGSVTSKQMIQDYEYYYKTESGKVL------------KEPIKFNVLITTFEMIV 2149
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
D LK W+ ++DE HRLKN++ KL L+Q + HRVLL+GTPLQNN+ ELF L+
Sbjct: 2150 TDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLL 2209
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
+FL+ +F S EEF EF + EE++++L +L P +LRR+K DV K L PK+E I+ V
Sbjct: 2210 NFLEPSQFSSQEEFMSEFGSLRTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEV 2269
Query: 539 ELSSKQKEYYKAILTRNYQILTRRG--GAQI-SLINVVMELRKLCCHPYMLEGVEPDI-- 593
EL++ QK+YY+ IL +N+ L ++G A I +L+N +MELRK C HPY+L G E I
Sbjct: 2270 ELTNIQKKYYRGILEQNFSFL-KKGTTSANIPNLMNTMMELRKCCIHPYLLNGAEEQIQY 2328
Query: 594 -------EDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
ED +K L+ S+GK+ L+DK++ KLK GHRVLI+SQ LD+LEDYL +
Sbjct: 2329 DFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVY 2388
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+K+ +ERIDG++ G RQ IDR++ S RF FLL T+AGGLGINL ADTVIIYDSDW
Sbjct: 2389 RKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDW 2448
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQ 763
NP DLQA AR HR+GQ V I+RL+ R + E M K+ L+ V+ + Q
Sbjct: 2449 NPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREMFDKASMKLGLDKAVLQSMNTQ 2505
Score = 46 (21.3 bits), Expect = 6.0e-140, Sum P(3) = 6.0e-140
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 2 SSLVERLRVRSDRKPIYQLDESDDDADFEQGKPGTTVE 39
+SL+ V+ D+KP S+ +D E+ +P + E
Sbjct: 1544 NSLLVASPVKKDKKPSANASNSNAGSDVEKTEPQSGAE 1581
Score = 42 (19.8 bits), Expect = 6.0e-140, Sum P(3) = 6.0e-140
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 714 AMARAHRLGQT-NKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVG 758
+M +L T NK+M T IEE ++ KK+ L+ +V+G
Sbjct: 4286 SMGNKSKLDDTLNKLMKKNNCT---IEEPVIGKEKKRKKLDEIVLG 4328
Score = 37 (18.1 bits), Expect = 5.3e-139, Sum P(3) = 5.3e-139
Identities = 9/52 (17%), Positives = 23/52 (44%)
Query: 9 RVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGES 60
+ D+ + + + SD+ + + T EK + + I+ + + + ES
Sbjct: 1804 KANDDQSAVSKAEGSDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEES 1855
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 292/668 (43%), Positives = 409/668 (61%)
Query: 126 KQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEE-DF 184
+++ ++++ VK+K SYLHC W +E K + R++ K+ F + N E D
Sbjct: 5 EEVEIEEFYVKYKNFSYLHCQWASVEELDK----DKRIQQKIKRFKAKQGQNKFLSEIDD 60
Query: 185 VAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ +DRIL R DD E YLVK+ L Y++ WE + DI Q +IE F
Sbjct: 61 ELFNPDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDID--QAKIEEF 118
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
K+ SR + + P D ++++ E S E+ + L YQLEG+N+L F
Sbjct: 119 EKLMSRE--PEMERVERPPAD---------DWKKSESSREYKNNNKLREYQLEGVNWLLF 167
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF TW +
Sbjct: 168 NWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWT-E 226
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NVV+Y G+ +R I+ YE YF + KF ++T++EMI
Sbjct: 227 LNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIITTFEMIL 274
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++ELF L+
Sbjct: 275 TDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLL 334
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ G+F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ V
Sbjct: 335 HFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEV 394
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-ED 595
EL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E I E+
Sbjct: 395 ELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEE 454
Query: 596 TNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
E+ + +++++GKL L+DK++ KLK GHRVLI+SQ LD+LEDYL
Sbjct: 455 FKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQ 514
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 515 RRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 574
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV----GRLKA 762
NP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+ GR A
Sbjct: 575 NPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENA 634
Query: 763 QN-INQVT 769
N + Q++
Sbjct: 635 TNGVQQLS 642
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 1308 (465.5 bits), Expect = 3.2e-136, Sum P(2) = 3.2e-136
Identities = 292/656 (44%), Positives = 416/656 (63%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNN----NAEEDFVA- 186
QYL+KWKG S++H TW E E LK + N R K++N+ ++ NA + V
Sbjct: 315 QYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQETKRWLKNASPEDVEY 371
Query: 187 ----------IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISA-F 232
+ ++ V+RI+A + +Y K++ L Y EC WE + IS F
Sbjct: 372 YNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLPYSECSWEDGALISKKF 431
Query: 233 QPEIERFIKIQSRSHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFLSG--G-SLHP 288
Q I+ + SR N+ K++P +D ++P+ F + P ++ G G L
Sbjct: 432 QTCIDEYF---SR------NQSKTTPFKDCKVLKQRPR-FVALKKQPSYIGGHEGLELRD 481
Query: 289 YQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER--ISPHLVVAPLSTLR 346
YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E P L+V PLSTL
Sbjct: 482 YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT 541
Query: 347 NWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIK 406
+W+RE TWA QMN V+Y+G +RN+IR +E+ P R+K
Sbjct: 542 SWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTK------------------RLK 583
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + HR+L+TGTP
Sbjct: 584 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 643
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLRRVKKDV K
Sbjct: 644 LQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKDVEK 702
Query: 527 ELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYM 585
LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+K C H Y+
Sbjct: 703 SLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYL 762
Query: 586 LEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYL 644
++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ MLD+L +YL
Sbjct: 763 IKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYL 822
Query: 645 TFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDS 704
++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+ADTV+I+DS
Sbjct: 823 KYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDS 882
Query: 705 DWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
DWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+HLV+ R+
Sbjct: 883 DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 938
Score = 47 (21.6 bits), Expect = 3.2e-136, Sum P(2) = 3.2e-136
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 19 QLD--ESDDDADFEQGKPGT----TVE---KFERIVRIDAKDDSCQACGE 59
Q+D E +DD D++ K + TV K + ++ D+ DD + CGE
Sbjct: 211 QIDSSEDEDDEDYDNDKRSSRRQATVNVSYKEDEEMKTDS-DDLLEVCGE 259
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 1335 (475.0 bits), Expect = 3.3e-135, P = 3.3e-135
Identities = 292/668 (43%), Positives = 409/668 (61%)
Query: 126 KQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEE-DF 184
+++ ++++ VK+K SYLHC W +E K + R++ K+ F + N E D
Sbjct: 57 EEVEIEEFYVKYKNFSYLHCQWASVEELDK----DKRIQQKIKRFKAKQGQNKFLSEIDD 112
Query: 185 VAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ +DRIL R DD E YLVK+ L Y++ WE + DI Q +IE F
Sbjct: 113 ELFNPDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDID--QAKIEEF 170
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
K+ SR + + P D ++++ E S E+ + L YQLEG+N+L F
Sbjct: 171 EKLMSRE--PEMERVERPPAD---------DWKKSESSREYKNNNKLREYQLEGVNWLLF 219
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF TW +
Sbjct: 220 NWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWT-E 278
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NVV+Y G+ +R I+ YE YF + KF ++T++EMI
Sbjct: 279 LNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIITTFEMIL 326
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++ELF L+
Sbjct: 327 TDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLL 386
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ G+F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ V
Sbjct: 387 HFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEV 446
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-ED 595
EL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E I E+
Sbjct: 447 ELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEE 506
Query: 596 TNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
E+ + +++++GKL L+DK++ KLK GHRVLI+SQ LD+LEDYL
Sbjct: 507 FKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQ 566
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 567 RRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 626
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV----GRLKA 762
NP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+ GR A
Sbjct: 627 NPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENA 686
Query: 763 QN-INQVT 769
N + Q++
Sbjct: 687 TNGVQQLS 694
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 1325 (471.5 bits), Expect = 4.7e-135, Sum P(2) = 4.7e-135
Identities = 292/675 (43%), Positives = 406/675 (60%)
Query: 120 VSKLGSKQIF-VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFH-RQMSSN 177
V+K ++Q V+++ VK+K SY+HC W L+ + + R+ K+ F +Q
Sbjct: 690 VTKKEARQYTNVEEFFVKYKNYSYMHCEWAS----LEQLERDKRIHQKLKRFKTKQAQMR 745
Query: 178 NNAEEDFVAIRPEWTTVDRIL-ACRGED-DEKE----YLVKYKELSYDECYWEYESDISA 231
N +ED P++ VDRIL D D E YLVK+ L Y++ WE + D+
Sbjct: 746 NLFQEDEEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDATWELKEDVD- 804
Query: 232 FQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQL 291
+ ++E F KI+SR R K +P+ + KK E S E+ +G L YQL
Sbjct: 805 -EGKVEEFRKIESRQPRL-----KRTPRPAASAWKKLDE------STEYKNGNQLREYQL 852
Query: 292 EGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWER 350
EG+N+L F+W + + ILADEMGLGKTIQSIA L+ +F + SP +++APLST+ NWER
Sbjct: 853 EGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITNWER 912
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
EF+ W MN ++Y G+ +R +I++YE Y KFD L
Sbjct: 913 EFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAY------------KFDAL 959
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
+T++EMI D L+ I W+C+++DE HRLKN++ KL SLK H+VLLTGTPLQN
Sbjct: 960 ITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNT 1019
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
++ELF L+HFL+ +F S EF EF D+ EEQ+ +L +L P +LRR+K+DV K L P
Sbjct: 1020 VEELFSLLHFLEPAQFPSEIEFLREFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNLAP 1079
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS----LINVVMELRKLCCHPYML 586
K+E I+ VEL+ QK+YY+AIL RN+ L+ G Q S L+N +MELRK C HPY++
Sbjct: 1080 KQETIIEVELTDVQKKYYRAILERNFSFLSM-GATQNSNVPNLLNTMMELRKCCNHPYLI 1138
Query: 587 EGVEPDI-EDTNESF---------KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
G E I + E + + L+ S+GKL LLDK++ +LK GH+VLI+SQ
Sbjct: 1139 TGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRC 1198
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+LEDYL K++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL A
Sbjct: 1199 LDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAA 1258
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DT +I+DSDWNP DLQA AR HR+GQ+ V ++RLITR S E M+ K+ L+ V
Sbjct: 1259 DTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAV 1318
Query: 757 VGRLKAQNINQVTIF 771
+ + + + F
Sbjct: 1319 LQSMSGNKESSIQQF 1333
Score = 44 (20.5 bits), Expect = 4.7e-135, Sum P(2) = 4.7e-135
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 13 DRKPIYQLDESDDDADFEQGKPGTTVEKFERIV-RIDAKDD 52
D P++ LD +DA F QG E + + ++D D
Sbjct: 10 DDTPLFNLDSLPEDA-FSQGSSDPVEEALKLALGQVDPPTD 49
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 1325 (471.5 bits), Expect = 7.4e-135, P = 7.4e-135
Identities = 293/651 (45%), Positives = 416/651 (63%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEF--LKAFKSNPRL-----RTKVNNFHRQMSSNNNAE--E 182
Q+L+KWKG SY+H TW E +KA K +L + K + R+ + + + E
Sbjct: 367 QFLIKWKGWSYIHNTWESEATLRDMKA-KGMKKLDNFIKKEKEQAYWRRYAGPEDIDYFE 425
Query: 183 DFVAIRPE----WTTVDRILA--CRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEI 236
+ ++ E + VDRI+A + +D +EYL K++ L Y E WE D + +
Sbjct: 426 CQLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAESTWE---DAALVLRKW 482
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG-SLHPYQLEGLN 295
+R + Q SS K +P K +F + ++ PEFLS G +L YQ++GLN
Sbjct: 483 QRCAE-QFNDRESS----KCTPSRHCRVIKYRPKFSRIKNQPEFLSSGLTLRDYQMDGLN 537
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG--ERISPHLVVAPLSTLRNWEREFA 353
+L SW K+ VILADEMGLGKTIQ+I FL SLF P L V PLST+ W+REF
Sbjct: 538 WLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFD 597
Query: 354 TWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTS 413
WAP MNVV Y+G ++R +I++YE+ F R+KF+ +LT+
Sbjct: 598 LWAPDMNVVTYLGDIKSRELIQQYEWQFESSK------------------RLKFNCILTT 639
Query: 414 YEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDE 473
YE++ D L ++W ++VDE HRLKN DS L+ SLK++ T HR+L+TGTPLQN+L E
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKE 699
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKE 533
L+ L+HF+ KF + E F+ + + +++ +RLH+ L P++LRRVKKDV K LP K E
Sbjct: 700 LWALLHFIMPDKFDTWENFEVQHGNA-EDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVE 758
Query: 534 LILRVELSSKQKEYYKAILTRNYQILTRRG--GAQISLINVVMELRKLCCHPYMLEGVEP 591
ILRVE++S QK+YYK ILT+N+ L R+G G+ + +N+V+EL+K C H ++ E
Sbjct: 759 QILRVEMTSLQKQYYKWILTKNFDAL-RKGKRGSTSTFLNIVIELKKCCNHAALIRPSEF 817
Query: 592 DIE--DTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
++ +E+ + LL+ SGKL LLDK++ +LKE GHRVLI+SQ MLD+L DYL + +
Sbjct: 818 ELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHF 877
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLATADTVII+DSDWNP
Sbjct: 878 PFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 937
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
DLQA ARAHR+GQ N+V I+RL+T S+EE++++ K+KMVL+HLV+ R+
Sbjct: 938 NDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLDHLVIQRM 988
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 1335 (475.0 bits), Expect = 9.1e-135, P = 9.1e-135
Identities = 292/668 (43%), Positives = 409/668 (61%)
Query: 126 KQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEE-DF 184
+++ ++++ VK+K SYLHC W +E K + R++ K+ F + N E D
Sbjct: 820 EEVEIEEFYVKYKNFSYLHCQWASVEELDK----DKRIQQKIKRFKAKQGQNKFLSEIDD 875
Query: 185 VAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ +DRIL R DD E YLVK+ L Y++ WE + DI Q +IE F
Sbjct: 876 ELFNPDYVEIDRILDFSRSTDDNGEPVTHYLVKWCSLPYEDSTWELKQDID--QAKIEEF 933
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
K+ SR + + P D ++++ E S E+ + L YQLEG+N+L F
Sbjct: 934 EKLMSRE--PEMERVERPPAD---------DWKKSESSREYKNNNKLREYQLEGVNWLLF 982
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF TW +
Sbjct: 983 NWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWT-E 1041
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NVV+Y G+ +R I+ YE YF + KF ++T++EMI
Sbjct: 1042 LNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIITTFEMIL 1089
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++ELF L+
Sbjct: 1090 TDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLL 1149
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ G+F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ V
Sbjct: 1150 HFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEV 1209
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-ED 595
EL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E I E+
Sbjct: 1210 ELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEE 1269
Query: 596 TNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
E+ + +++++GKL L+DK++ KLK GHRVLI+SQ LD+LEDYL
Sbjct: 1270 FKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQ 1329
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 1330 RRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1389
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV----GRLKA 762
NP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+ GR A
Sbjct: 1390 NPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENA 1449
Query: 763 QN-INQVT 769
N + Q++
Sbjct: 1450 TNGVQQLS 1457
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 1326 (471.8 bits), Expect = 2.5e-134, Sum P(2) = 2.5e-134
Identities = 293/674 (43%), Positives = 411/674 (60%)
Query: 122 KLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAE 181
K +++ V+++ VK+K SYLHC W ++ K + R++ K+ F + N
Sbjct: 765 KESGEEVEVEEFYVKYKNFSYLHCQWASIEDLEK----DKRIQQKIKRFKAKQGQNKFLS 820
Query: 182 E-DFVAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPE 235
E + P++ VDRI+ R DD E YLVK+ L Y++ WE DI Q +
Sbjct: 821 EIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDID--QAK 878
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEG 293
IE F K+ SR P+ TE ++P ++++ E S E+ + L YQLEG
Sbjct: 879 IEEFEKLMSRE-----------PE--TERVERPPADDWKKSESSREYKNNNKLREYQLEG 925
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+N+L F+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF
Sbjct: 926 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREF 985
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
TW ++NVV+Y G+ +R I+ YE YF + KF ++T
Sbjct: 986 RTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIIT 1032
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD 472
++EMI D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++
Sbjct: 1033 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1092
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
ELF L+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+
Sbjct: 1093 ELFSLLHFLEPTRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE 1152
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVE 590
E I+ VEL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E
Sbjct: 1153 ETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE 1212
Query: 591 PDI-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
I E+ E+ + +++++GKL L+DK++ KLK GHRVLI+SQ LD+L
Sbjct: 1213 EKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1272
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
EDYL +++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT I
Sbjct: 1273 EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI 1332
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--- 757
I+DSDWNP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+
Sbjct: 1333 IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1392
Query: 758 -GRLKAQN-INQVT 769
GR A N + Q++
Sbjct: 1393 SGRENAPNGVQQLS 1406
Score = 40 (19.1 bits), Expect = 2.5e-134, Sum P(2) = 2.5e-134
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 2 SSLVERLRVRSDRKPIYQL-DESDDDADFE-QGKPGTTVEKFERIVRIDA 49
S V+R R D + +++ DE DDAD + P TT + E +DA
Sbjct: 701 SRQVKRKRYTEDLE--FKISDEEADDADAAGRDSPSTTSQS-EPQESVDA 747
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 1327 (472.2 bits), Expect = 2.7e-134, Sum P(2) = 2.7e-134
Identities = 295/674 (43%), Positives = 416/674 (61%)
Query: 122 KLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFH-RQMSSNNNA 180
K +++ V+++ VK+K SYLHC W ++ K + R++ K+ F +Q S +
Sbjct: 805 KESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEK----DKRIQQKIKRFKSKQGQSKFLS 860
Query: 181 EEDFVAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPE 235
E + P++ VDRI+ R DD E YLVK+ L Y++ WE + DI Q +
Sbjct: 861 EIEDDLFNPDYVEVDRIMDFARSTDDRGEPVIHYLVKWCSLPYEDSTWELKQDID--QTK 918
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEG 293
IE F K+ SR P+ TE ++P ++++ E S E+ + L YQLEG
Sbjct: 919 IEEFEKLMSRE-----------PE--TERVERPPADDWKKSESSREYKNNNKLREYQLEG 965
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+N+L F+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF
Sbjct: 966 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREF 1025
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
TW ++NVV+Y G+ +R I+ YE YF + KF ++T
Sbjct: 1026 RTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIIT 1072
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD 472
++EMI D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++
Sbjct: 1073 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1132
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
ELF L+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+
Sbjct: 1133 ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE 1192
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVE 590
E I+ VEL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E
Sbjct: 1193 ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE 1252
Query: 591 PDI----EDTN--ES----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
I ++T+ ES + +++++GKL L+DK++ KLK GHRVLI+SQ LD+L
Sbjct: 1253 EKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1312
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
EDYL +++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT I
Sbjct: 1313 EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI 1372
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--- 757
I+DSDWNP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+
Sbjct: 1373 IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1432
Query: 758 -GRLKAQN-INQVT 769
GR A N + Q++
Sbjct: 1433 SGRENATNGVQQLS 1446
Score = 39 (18.8 bits), Expect = 2.7e-134, Sum P(2) = 2.7e-134
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 2 SSLVERLRVRSDRKPIYQL-DESDDDADFE-QGKPGTTVEKFERIVRIDAK 50
S V+R R D + +++ DE DDAD + P T + E+ +DA+
Sbjct: 741 SRQVKRKRYTEDLE--FKISDEEADDADAAGRDSPSNTSQS-EQQESVDAE 788
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 1327 (472.2 bits), Expect = 2.7e-134, Sum P(2) = 2.7e-134
Identities = 292/674 (43%), Positives = 411/674 (60%)
Query: 122 KLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAE 181
K +++ V+++ VK+K SYLHC W ++ K + R++ K+ F + N
Sbjct: 814 KDSGEEVEVEEFYVKYKNFSYLHCQWASVEDLEK----DKRIQQKIKRFKAKQGQNKFLS 869
Query: 182 E-DFVAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPE 235
E + P++ VDRI+ R D+ E YLVK+ L Y++ WE DI Q +
Sbjct: 870 EIEDELFNPDYVEVDRIMDFARSTDERGEPVTHYLVKWCSLPYEDSTWELRQDID--QAK 927
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEG 293
IE F K+ SR P+ TE ++P ++++ E S E+ + L YQLEG
Sbjct: 928 IEEFEKLMSRE-----------PE--TERVERPPADDWKKSESSREYKNNNKLREYQLEG 974
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+N+L F+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF
Sbjct: 975 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREF 1034
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
TW ++NVV+Y G+ +R I+ YE YF + KF ++T
Sbjct: 1035 RTWT-ELNVVVYHGSQASRRTIQSYEMYFKDPQGRVI------------KGSYKFHAIIT 1081
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD 472
++EMI D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++
Sbjct: 1082 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1141
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
ELF L+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+
Sbjct: 1142 ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE 1201
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVE 590
E I+ VEL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E
Sbjct: 1202 ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE 1261
Query: 591 PDI-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
I E+ E+ + +++++GKL L+DK++ KLK GHRVLI+SQ LD+L
Sbjct: 1262 EKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1321
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
EDYL +++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT I
Sbjct: 1322 EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI 1381
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--- 757
I+DSDWNP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+
Sbjct: 1382 IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1441
Query: 758 -GRLKAQN-INQVT 769
GR A N + Q++
Sbjct: 1442 SGRENATNGVQQLS 1455
Score = 39 (18.8 bits), Expect = 2.7e-134, Sum P(2) = 2.7e-134
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 2 SSLVERLRVRSDRKPIYQL-DESDDDADFE-QGKPGTTVEKFERIVRIDAK 50
S V+R R D + +++ DE DDAD + P T + E+ +DA+
Sbjct: 750 SRQVKRKRYTEDLE--FKISDEEADDADTAGRDSPSNTSQS-EQQESVDAE 797
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 1326 (471.8 bits), Expect = 3.5e-134, Sum P(2) = 3.5e-134
Identities = 293/674 (43%), Positives = 413/674 (61%)
Query: 122 KLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAE 181
K +++ ++++ VK+K SYLHC W ++ K + R++ K+ F + N
Sbjct: 815 KESGEEVEIEEFYVKYKNFSYLHCQWASIEDLEK----DKRIQQKIKRFKAKQGQNKFLS 870
Query: 182 E-DFVAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPE 235
E + P++ VDRI+ R DD E YLVK+ L Y++ WE DI Q +
Sbjct: 871 EIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWERRQDID--QAK 928
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEG 293
IE F K+ SR P+ TE ++P ++++ E S E+ + L YQLEG
Sbjct: 929 IEEFEKLMSRE-----------PE--TERVERPPADDWKKSESSREYKNNNKLREYQLEG 975
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+N+L F+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF
Sbjct: 976 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREF 1035
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
TW ++NVV+Y G+ +R I+ YE YF + KF ++T
Sbjct: 1036 RTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIIT 1082
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD 472
++EMI D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++
Sbjct: 1083 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1142
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
ELF L+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+
Sbjct: 1143 ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE 1202
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVE 590
E I+ VEL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E
Sbjct: 1203 ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE 1262
Query: 591 PDI----EDTN--ES----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
I ++T+ ES + +++++GKL L+DK++ KLK GHRVLI+SQ LD+L
Sbjct: 1263 EKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1322
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
EDYL +++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT I
Sbjct: 1323 EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI 1382
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--- 757
I+DSDWNP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+
Sbjct: 1383 IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1442
Query: 758 -GRLKAQN-INQVT 769
GR A N + Q++
Sbjct: 1443 SGRENATNGVQQLS 1456
Score = 39 (18.8 bits), Expect = 3.5e-134, Sum P(2) = 3.5e-134
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 2 SSLVERLRVRSDRKPIYQL-DESDDDADFE-QGKPGTTVEKFERIVRIDAK 50
S V+R R D + +++ DE DDAD + P T + E+ +DA+
Sbjct: 751 SRQVKRKRYTEDLE--FKISDEEADDADAAGRDSPSNTSQS-EQQESVDAE 798
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 1322 (470.4 bits), Expect = 9.2e-134, Sum P(2) = 9.2e-134
Identities = 292/674 (43%), Positives = 413/674 (61%)
Query: 122 KLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFH-RQMSSNNNA 180
K +++ V+++ VK+K SYLHC W ++ K + R++ K+ F +Q S +
Sbjct: 804 KESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEK----DKRIQQKIKRFKSKQGQSKFLS 859
Query: 181 EEDFVAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPE 235
E + P++ VDRI+ R DD E YLVK+ L Y++ WE D+ Q +
Sbjct: 860 EIEDDLFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDLD--QAK 917
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEG 293
IE F K+ SR P+ TE ++P ++++ E S E+ + L YQLEG
Sbjct: 918 IEEFEKLMSRE-----------PE--TERVERPPADDWKKSESSREYKNNNKLREYQLEG 964
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+N+L F+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF
Sbjct: 965 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREF 1024
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
TW ++NVV+Y G+ +R I+ YE YF + KF ++T
Sbjct: 1025 RTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVI------------KGSYKFHAIIT 1071
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD 472
++EMI D L+ I W+C+++DE HRLKN++ KL LK H+VLLTGTPLQN ++
Sbjct: 1072 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE 1131
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
ELF L+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+
Sbjct: 1132 ELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE 1191
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVE 590
E I+ VEL++ QK+YY+AIL +N+ L++ GG A + +L+N +MELRK C HPY++ G E
Sbjct: 1192 ETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE 1251
Query: 591 PDI----EDTNES------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
I +D + + + +++++GKL L+DK++ KLK GHRVLI+SQ LD+L
Sbjct: 1252 EKILEEFKDAHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1311
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
EDYL +++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT I
Sbjct: 1312 EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI 1371
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--- 757
I+DSDWNP DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+
Sbjct: 1372 IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM 1431
Query: 758 -GRLKAQN-INQVT 769
GR A N + Q++
Sbjct: 1432 SGRENATNGVQQLS 1445
Score = 39 (18.8 bits), Expect = 9.2e-134, Sum P(2) = 9.2e-134
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 2 SSLVERLRVRSDRKPIYQL-DESDDDADFE-QGKPGTTVEKFERIVRIDAK 50
S V+R R D + +++ DE DDAD + P T + E+ +DA+
Sbjct: 740 SRQVKRKRYTEDLE--FKISDEEADDADAAGRDSPSNTSQS-EQQESVDAE 787
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 290/653 (44%), Positives = 398/653 (60%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEF--LKAFKSNPRLRTKVNNFHRQMSSN-NNAEEDFVAIR 188
++L+KW S+LHCTW P ++ K +V R++ + ED A+
Sbjct: 215 EFLIKWVNFSHLHCTWEPYNNISMIRGSKKVDNHIKQVILLDREIREDPTTTREDIEAMD 274
Query: 189 ----------PEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYESDISAFQP-EI 236
E+ VDRI+A D EYLVK+K+L YD C WE S I EI
Sbjct: 275 IEKERKRENYEEYKQVDRIVAKHLNSDGSVEYLVKWKQLLYDFCTWEASSIIEPIAATEI 334
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTE-STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLN 295
+ F Q R + SP T +PK +++ E P +++GG L +QL G+N
Sbjct: 335 QAF---QEREESAL------SPSRGTNYGNSRPK-YRKLEQQPSYITGGELRDFQLTGVN 384
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE--RISPHLVVAPLSTLRNWEREFA 353
++ + W K + ILADEMGLGKT+Q++AFL+ L + P LVV PLST+ W+ A
Sbjct: 385 WMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLA 444
Query: 354 TWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTS 413
WA MN + Y+G + +R +IR+YEFY +IKF++LLT+
Sbjct: 445 LWASDMNCISYLGNTTSRQVIRDYEFYVDGT------------------QKIKFNLLLTT 486
Query: 414 YEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDE 473
YE + D + L IKWQ M +DE HRLKN +S L+ +L Q+ +R+L+TGTPLQNN+ E
Sbjct: 487 YEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRE 546
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKE 533
L L+ FL GKF EE E D QE I L L P++LRR+KKDV K LP K E
Sbjct: 547 LAALVDFLMPGKFEIREEINLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSE 606
Query: 534 LILRVELSSKQKEYYKAILTRNYQILTRR--GGAQISLINVVMELRKLCCHPYMLEGVEP 591
ILRVELS Q +YK ILTRNY++LT+ G+QISL+N+V+EL+K HPY+ +GVE
Sbjct: 607 RILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKKASNHPYLFDGVEE 666
Query: 592 D-IEDTN------ESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYL 644
++ N E K L+ +SGK+ LLDK++ +L+ GHRVLI+SQ MLD+L DYL
Sbjct: 667 SWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYL 726
Query: 645 TFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDS 704
+ + + ++R+DG V A R+ ID FNA NS F FLLSTRAGGLGINL TADTVII+DS
Sbjct: 727 SLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDS 786
Query: 705 DWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DWNP ADLQAMARAHR+GQ N VM++RL+++ +IEE +++ ++KM+LE+ ++
Sbjct: 787 DWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAII 839
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 1282 (456.3 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 289/657 (43%), Positives = 403/657 (61%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNF---HRQMSSNN--NAEE---- 182
++L+KW S+LH TW E + + RL F +Q+ + AE+
Sbjct: 212 EFLIKWTDESHLHNTW-ETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEIM 270
Query: 183 DFVAIR-----PEWTTVDRILACRG---ED--DEKEYLVKYKELSYDECYWEYESDISAF 232
D R E+ +RI+ + ED + +YLVK++ L+YDE WE +DI
Sbjct: 271 DMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEATWENATDIVKL 330
Query: 233 QPE-IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQL 291
PE ++ F Q+R + K PQ + T + F++ P F+ GG L +QL
Sbjct: 331 APEQVKHF---QNREN------SKILPQYSSNYTSQRPRFEKLSVQPPFIKGGELRDFQL 381
Query: 292 EGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERIS-PHLVVAPLSTLRNWE 349
G+N++ F WSK + ILADEMGLGKT+Q++AF++ L F R + PH++V PLST+ W
Sbjct: 382 TGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWL 441
Query: 350 REFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDV 409
F WAP +N + Y+G ++R+ IREYEFY + +KF+V
Sbjct: 442 DTFEKWAPDLNCICYMGNQKSRDTIREYEFY--------------TNPRAKGKKTMKFNV 487
Query: 410 LLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
LLT+YE I D A L IKWQ M VDE HRLKN +S L+ SL + +R+L+TGTPLQN
Sbjct: 488 LLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQN 547
Query: 470 NLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELP 529
N+ EL L++FL G+F +E E +D QEE I LHR + P +LRR+KKDV K LP
Sbjct: 548 NIKELAALVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLP 607
Query: 530 PKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEG 588
K E ILRVELS Q EYYK ILT+NY LT G SL+N++ EL+K HPY+ +
Sbjct: 608 SKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDN 667
Query: 589 VEP-------DIEDTNES-FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
E D + T E+ + L+ SSGK+ LLD+++ +LK+ GHRVLI+SQ MLD+L
Sbjct: 668 AEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDIL 727
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
DYL+ K ++R+DG V A+R+I ID FN+ +S+ F FLLSTRAGGLGINL TADTV+
Sbjct: 728 GDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVV 787
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
I+DSDWNP ADLQAMARAHR+GQ N VM++RL+++ ++EE +++ +KKM+LE+ ++
Sbjct: 788 IFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAII 844
Score = 38 (18.4 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 7 RLRVRSDRKPIYQLDESDDD 26
R R ++ Y +D SDDD
Sbjct: 126 RFSNRQNKTVNYNIDYSDDD 145
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 1313 (467.3 bits), Expect = 1.8e-132, P = 1.8e-132
Identities = 309/774 (39%), Positives = 446/774 (57%)
Query: 21 DESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTCTYAYHAKCLVP 80
+ SD+ +D EQ T E+ + R + + + ++E C V
Sbjct: 609 ESSDELSDAEQMPQHTFKEQHSQKRRSNRQVKRKKYAEDAEGRQ----CEEEVRGSLKVK 664
Query: 81 PLKAPPSGSWRCPECV-SPLND----IDKILDCEMRPTVAGDSDVSKLGSKQIFVKQYLV 135
APP G V +P + +DKIL C TV +VS + ++++ V
Sbjct: 665 RTSAPPPGEQPLQLFVENPSEEDAAIVDKILACR---TVK--KEVSP--GVMLDIEEFFV 717
Query: 136 KWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFVAIRPEWTT 193
K+K SYLHC W E++ LK + R++ K+ F + + + A+ + P++
Sbjct: 718 KYKNYSYLHCEWATEQQLLK----DKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773
Query: 194 VDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSH 247
VDRIL C +D + YLVK+ L Y++ WE + D+ +IE F ++Q+
Sbjct: 774 VDRILEVSFCEDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDL--AKIEEFEQLQA--- 828
Query: 248 RSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTH 306
S P D + + P +++ + S E+ +G L YQLEGLN+L F+W + +
Sbjct: 829 --------SRP-DTRQLDRPPSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRN 879
Query: 307 VILADEMGLGKTIQSIAFLAS--LFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMY 364
ILADEMGLGKTIQSI FL L G R P L++APLST+ NWEREF TW +NVV+Y
Sbjct: 880 CILADEMGLGKTIQSITFLYEVLLTGIR-GPFLIIAPLSTIANWEREFRTWT-DINVVVY 937
Query: 365 VGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASL 424
G+ +R +I++YE YF + +F ++T++EMI L
Sbjct: 938 HGSLISRQMIQQYEMYF------------RDSQGRIIRGAYRFQAIITTFEMILGGCGEL 985
Query: 425 KPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAG 484
I+W+C+I+DE HRLKNK+ KL LK + H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 986 NAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPL 1045
Query: 485 KFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQ 544
+F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++ Q
Sbjct: 1046 RFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQ 1105
Query: 545 KEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI----EDT-N 597
K+YY+AIL +N+ L++ G + +L+N +MELRK C HPY+++G E I DT N
Sbjct: 1106 KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKIIGEFRDTYN 1165
Query: 598 ES-----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYE 652
S + +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL K++ YE
Sbjct: 1166 PSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE 1225
Query: 653 RIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADL 712
RIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP DL
Sbjct: 1226 RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL 1285
Query: 713 QAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
QA AR HR+GQ V ++RL+TR S E M K+ L+ V+ + ++ N
Sbjct: 1286 QAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRDSN 1339
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 1311 (466.6 bits), Expect = 2.9e-132, P = 2.9e-132
Identities = 310/789 (39%), Positives = 453/789 (57%)
Query: 5 VERLRVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLM 64
+ +L + +K + + SD+ +D EQ T E+ + R + + + ++E
Sbjct: 593 IGKLIITLGKKHKRRNESSDELSDAEQRSQHTFKEQHSQKRRSNRQIKRKKYAEDAEGKQ 652
Query: 65 SCDTCTYAYHAKCLVPPLKAPPSGSWRCPECV-SPLND----IDKILDCEMRPTVAGDSD 119
S + + K APP G V +P + +DKIL C TV +
Sbjct: 653 SEEEVKGSLRVK----RNSAPPPGEQPLQLFVENPSEEDAAIVDKILACR---TVK--KE 703
Query: 120 VSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN 179
VS + ++++ VK+K SYLHC W E++ LK + R++ K+ F + + +
Sbjct: 704 VSP--GVMLDIEEFFVKYKNYSYLHCEWATEQQLLK----DKRIQQKIKRFKLRQAQRAH 757
Query: 180 --AEEDFVAIRPEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISA 231
A+ + P++ VDRIL C +D + YLVK+ L Y++ WE + D+
Sbjct: 758 FLADMEEEPFNPDYVEVDRILEVSFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDL 817
Query: 232 FQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPEFLSGGSLHPYQ 290
+IE F ++Q+ S P D + P +++ E S E+ +G L YQ
Sbjct: 818 --AKIEEFEQLQA-----------SRP-DTRHLDRPPSNIWKKIEQSREYKNGNQLREYQ 863
Query: 291 LEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWE 349
LEGLN+L F+W + + ILADEMGLGKTIQSI FL + I P L++APLST+ NWE
Sbjct: 864 LEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWE 923
Query: 350 REFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDV 409
REF TW +NVV+Y G+ +R +I++YE YF + +F
Sbjct: 924 REFRTWT-DINVVVYHGSLISRQMIQQYEMYF------------RDSQGRIIRGAYRFQA 970
Query: 410 LLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
++T++EMI L I W+C+I+DE HRLKNK+ KL LK + H+VLLTGTPLQN
Sbjct: 971 IITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQN 1030
Query: 470 NLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELP 529
++ELF L+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K+L
Sbjct: 1031 TVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLA 1090
Query: 530 PKKELILRVELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLE 587
PK+E I+ VEL++ QK+YY+AIL +N+ L++ G + +L+N +MELRK C HPY+++
Sbjct: 1091 PKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIK 1150
Query: 588 GVEPDI----EDT-NES-----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHML 637
G E I DT N S + +++S+GKL L+DK++ K+K GH+VLI+SQ L
Sbjct: 1151 GAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCL 1210
Query: 638 DLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATAD 697
D+LEDYL K++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL AD
Sbjct: 1211 DILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAAD 1270
Query: 698 TVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
T II+DSDWNP DLQA AR HR+GQ V ++RL+TR S E M K+ L+ V+
Sbjct: 1271 TCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVL 1330
Query: 758 GRLKAQNIN 766
+ ++ N
Sbjct: 1331 QSMSGRDSN 1339
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 1306 (464.8 bits), Expect = 3.7e-132, P = 3.7e-132
Identities = 287/656 (43%), Positives = 404/656 (61%)
Query: 130 VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN-AEEDFVAIR 188
V++Y VK+K SYLHC W ++ + + R+ K+ F +M+ + +ED +
Sbjct: 609 VEEYFVKYKNYSYLHCEWAT----IEQLERDKRIHQKLKRFKTKMTQMQHFLQEDEESFN 664
Query: 189 PEWTTVDRIL--ACRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKI 242
P++ VDRIL + + D E YLVK+ L Y++ WE + D+ +IE F +I
Sbjct: 665 PDYVEVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVD--DGKIEEFKRI 722
Query: 243 QSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWS 302
++R K+ + P S KK E S E+ +G L YQLEG+N+L F+W
Sbjct: 723 EARQPNL---KRVARP--AATSWKK------LELSREYQNGNQLREYQLEGVNWLLFNWY 771
Query: 303 KQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNV 361
+ + ILADEMGLGKTIQSI FL ++ I P LV+APLST+ NWEREF +W QMN
Sbjct: 772 NRQNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWT-QMNT 830
Query: 362 VMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDS 421
++Y G+ +R +I++YE Y KFD L+T++EM+ D
Sbjct: 831 IVYHGSLASRQMIQQYEMYCKDSKGRLIPGAY------------KFDALITTFEMVLSDC 878
Query: 422 ASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFL 481
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL
Sbjct: 879 PELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFL 938
Query: 482 DAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELS 541
+ +F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL+
Sbjct: 939 EPTQFSSEAEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELT 998
Query: 542 SKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEPDI-EDTN 597
+ QK+YY+AIL +N+ LT+ G +Q + L+N +MELRK C HPY++ G E I +
Sbjct: 999 NIQKKYYRAILEKNFSFLTK-GASQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFR 1057
Query: 598 ES-------F--KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKK 648
E+ F + ++ SSGKL L+DK++ KL+ GH+VLI+SQ LD+LEDYL ++
Sbjct: 1058 EATPVVPPDFHVQAMVRSSGKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRR 1117
Query: 649 WQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNP 708
+ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1118 YLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1177
Query: 709 HADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
DLQA AR HR+GQ+ V I+RLITR S E M K+ L+ V+ + ++
Sbjct: 1178 QNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRD 1233
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 277/660 (41%), Positives = 403/660 (61%)
Query: 128 IFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFV 185
I +++ VK+K SYLHC W E++ LK + R++ K+ F + + + A+ +
Sbjct: 237 IDTEEFFVKYKNYSYLHCEWATEEQLLK----DKRIQQKIKRFKLRQAQRAHFFADMEEE 292
Query: 186 AIRPEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ VDR+L C +D + YLVK+ L Y++ WE + D+ +IE F
Sbjct: 293 PFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDL--AKIEEF 350
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
++Q+ R + P ++ +++ + S ++ +G L YQLEGLN+L F
Sbjct: 351 EQLQAS--RPDTRRLDRPPSNI---------WKKIDQSRDYKNGNQLREYQLEGLNWLLF 399
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
+W + + ILADEMGLGKTIQSI FL + I P L++APLST+ NWEREF TW
Sbjct: 400 NWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWT-D 458
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NVV+Y G+ +R +I++YE YF + +F ++T++EMI
Sbjct: 459 INVVVYHGSLISRQMIQQYEMYF------------RDSQGRIIRGAYRFQAIITTFEMIL 506
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
L I+W+C+I+DE HRLKNK+ KL LK + H+VLLTGTPLQN ++ELF L+
Sbjct: 507 GGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLL 566
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K+L PK+E I+ V
Sbjct: 567 HFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEV 626
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI--- 593
EL++ QK+YY+AIL +N+ L++ G + +L+N +MELRK C HPY+++G E I
Sbjct: 627 ELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGE 686
Query: 594 -EDT-NES-----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
DT N + + +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL
Sbjct: 687 FRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIH 746
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
K++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 747 KRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 806
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
NP DLQA AR HR+GQ V ++RL+TR S E M K+ L+ V+ + + N
Sbjct: 807 NPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESN 866
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 1280 (455.6 bits), Expect = 1.0e-130, Sum P(2) = 1.0e-130
Identities = 270/655 (41%), Positives = 402/655 (61%)
Query: 130 VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRP 189
+ + LVKWK LSY+H +W+ K + S RL+ + + + + +N++ + +P
Sbjct: 355 ILEVLVKWKDLSYIHSSWINSKLMNQTRSSKMRLQRFIQ---KNIENEDNSDLLVSSTQP 411
Query: 190 EW---TTVDRILACRGED-------DEKEYLVKYKELSYDECYWEYESDISAFQPEIERF 239
W T V+++L R +K+YL+K+K +SY WEY+ D +IE++
Sbjct: 412 SWEEFTEVEKVLDVRTVSVTSNKFKADKQYLIKWKSISYSLSTWEYQDDFKD-DLKIEQY 470
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPE-FLSGGSLHPYQLEGLNFL 297
K+ + S +++ + + P+ +++ + SP+ F G L PYQLEGLN+L
Sbjct: 471 YKLN----------EMPSKEELRDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEGLNWL 520
Query: 298 RFSWSKQTHVILADEMGLGKTIQSIAFLASL---FGERISPHLVVAPLSTLRNWEREFAT 354
F W +Q + IL DEMGLGKT+QS++ L +L G R P LVVAPL+T+ +W+REF
Sbjct: 521 SFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIR-GPFLVVAPLTTIPHWKREFEN 579
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W MN ++Y + R I R YEFY KF+VL+T+Y
Sbjct: 580 WT-DMNALVYHDSGAGRPICRNYEFYLKDKDGGGGGASGGASGKIT-----KFNVLITTY 633
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EM D L I W+ +++DE HRLKNK KL L+ YS H +LLTGTPLQNN EL
Sbjct: 634 EMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGTPLQNNTQEL 693
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
+ L++FLD +F +L++F E+ D+ + Q+ L +L P+LLRR+K+ V K + PK+E
Sbjct: 694 WSLLNFLDPKQFSNLDQFLLEYGDLKESSQVESLQAILKPYLLRRMKERVEKSIAPKEET 753
Query: 535 ILRVELSSKQKEYYKAILTRNYQILTRRGGAQI---SLINVVMELRKLCCHPYMLEGVEP 591
I+ VEL++ QK+YY+AI +N+ L R+GG SL+N++MELRK C HPY+ +GVE
Sbjct: 754 IVEVELTTVQKKYYRAIYEKNFSFL-RKGGKSNQGPSLLNIMMELRKCCNHPYLTKGVEQ 812
Query: 592 D----IEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
I+D ++ F++L+++SGKL L+DK++ KLK H+VLI+SQ +LD+L+DYLT++
Sbjct: 813 SETSSIKDKDQIFQKLIQASGKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYR 872
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
+ +ERIDG + G +RQ IDRF+ +S RF FLL TRAGG+GINL ADTVII+DSDWN
Sbjct: 873 GYPHERIDGSIKGNDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWN 932
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKA 762
P DLQA AR HR+GQ V ++RL+T+ + E M KK+ L+ V+ ++ +
Sbjct: 933 PQNDLQAQARCHRIGQDKMVKVYRLVTKNTYERLMFDKASKKLGLDRAVLTKMNS 987
Score = 47 (21.6 bits), Expect = 1.0e-130, Sum P(2) = 1.0e-130
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 20 LDESDDDAD-FEQGKPGTTVEKFERIVRI 47
+DESDD+ D F+Q P ++K I +I
Sbjct: 286 IDESDDEIDKFKQMDPIERIKKEYSIEKI 314
Score = 37 (18.1 bits), Expect = 1.2e-129, Sum P(2) = 1.2e-129
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 21 DESDDDADFEQGKPGTTVEK 40
++SDD + +G+P +V K
Sbjct: 125 EDSDDLSKKSRGRPKASVSK 144
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 1292 (459.9 bits), Expect = 1.2e-130, P = 1.2e-130
Identities = 285/656 (43%), Positives = 400/656 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 283 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 338
Query: 190 EWTTVDRIL--ACRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL + + D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 339 DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 396
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H K+ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 397 SR-HPEL--KRVNRPQ--ASAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 445
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 446 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 504
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 505 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 552
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 553 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 612
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 613 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 672
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLEGVEPDI-EDTNES 599
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E+
Sbjct: 673 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREA 732
Query: 600 ---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
+ ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 733 CHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYL 792
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 793 YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 852
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 853 DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 908
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 1292 (459.9 bits), Expect = 2.3e-130, P = 2.3e-130
Identities = 285/656 (43%), Positives = 400/656 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 666 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 721
Query: 190 EWTTVDRIL--ACRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL + + D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 722 DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 779
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H K+ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 780 SR-HPEL--KRVNRPQ--ASAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 828
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 829 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 887
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 888 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 935
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 936 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 995
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 996 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 1055
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLEGVEPDI-EDTNES 599
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E+
Sbjct: 1056 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREA 1115
Query: 600 ---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
+ ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 1116 CHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYL 1175
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1176 YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 1235
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 1236 DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 1291
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 1292 (459.9 bits), Expect = 2.3e-130, P = 2.3e-130
Identities = 285/656 (43%), Positives = 400/656 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 666 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 721
Query: 190 EWTTVDRIL--ACRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL + + D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 722 DYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 779
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H K+ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 780 SR-HPEL--KRVNRPQ--ANAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 828
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 829 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 887
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 888 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 935
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 936 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 995
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 996 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 1055
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLEGVEPDI-EDTNES 599
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E+
Sbjct: 1056 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREA 1115
Query: 600 ---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
+ ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 1116 CHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYL 1175
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1176 YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 1235
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 1236 DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 1291
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 1289 (458.8 bits), Expect = 4.7e-130, P = 4.7e-130
Identities = 284/656 (43%), Positives = 400/656 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 668 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 723
Query: 190 EWTTVDRIL--ACRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL + + D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 724 DYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 781
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H ++ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 782 SR-HPEL--RRVNRPQ--ANAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 830
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 831 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 889
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 890 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 937
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 938 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 997
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 998 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 1057
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLEGVEPDI-EDTNES 599
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E+
Sbjct: 1058 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREA 1117
Query: 600 ---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
+ ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 1118 CHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYL 1177
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1178 YERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN 1237
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 1238 DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 1293
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 1290 (459.2 bits), Expect = 5.1e-130, P = 5.1e-130
Identities = 277/660 (41%), Positives = 403/660 (61%)
Query: 128 IFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFV 185
I +++ VK+K SYLHC W E++ LK + R++ K+ F + + + A+ +
Sbjct: 711 IDTEEFFVKYKNYSYLHCEWATEEQLLK----DKRIQQKIKRFKLRQAQRAHFFADMEEE 766
Query: 186 AIRPEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ VDR+L C +D + YLVK+ L Y++ WE + D+ +IE F
Sbjct: 767 PFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDL--AKIEEF 824
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
++Q+ R + P ++ +++ + S ++ +G L YQLEGLN+L F
Sbjct: 825 EQLQAS--RPDTRRLDRPPSNI---------WKKIDQSRDYKNGNQLREYQLEGLNWLLF 873
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
+W + + ILADEMGLGKTIQSI FL + I P L++APLST+ NWEREF TW
Sbjct: 874 NWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWT-D 932
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NVV+Y G+ +R +I++YE YF + +F ++T++EMI
Sbjct: 933 INVVVYHGSLISRQMIQQYEMYF------------RDSQGRIIRGAYRFQAIITTFEMIL 980
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
L I+W+C+I+DE HRLKNK+ KL LK + H+VLLTGTPLQN ++ELF L+
Sbjct: 981 GGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLL 1040
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K+L PK+E I+ V
Sbjct: 1041 HFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEV 1100
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI--- 593
EL++ QK+YY+AIL +N+ L++ G + +L+N +MELRK C HPY+++G E I
Sbjct: 1101 ELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGE 1160
Query: 594 -EDT-NES-----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
DT N + + +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL
Sbjct: 1161 FRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIH 1220
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
K++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 1221 KRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1280
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
NP DLQA AR HR+GQ V ++RL+TR S E M K+ L+ V+ + + N
Sbjct: 1281 NPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESN 1340
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 1289 (458.8 bits), Expect = 6.5e-130, P = 6.5e-130
Identities = 278/660 (42%), Positives = 401/660 (60%)
Query: 128 IFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFV 185
I +++ VK+K SYLHC W E++ LK + R++ K+ F + + + A+ +
Sbjct: 712 IDTEEFFVKYKNYSYLHCEWATEQQLLK----DKRIQQKIKRFKLRQAQRAHFFADMEEE 767
Query: 186 AIRPEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ VDR+L C +D + YLVK+ L Y++ WE + D+ +IE F
Sbjct: 768 PFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDL--AKIEEF 825
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
++Q+ S P P +++ + S ++ +G L YQLEGLN+L F
Sbjct: 826 EQLQA-----------SRPDTRHLDRPPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLF 874
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQ 358
+W + + ILADEMGLGKTIQSI FL + I P L++APLST+ NWEREF TW
Sbjct: 875 NWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWT-D 933
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NVV+Y G+ +R +I++YE YF + +F ++T++EMI
Sbjct: 934 INVVVYHGSLISRQMIQQYEMYF------------RDSQGRIIRGAYRFQAIITTFEMIL 981
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
L I+W+C+I+DE HRLKNK+ KL LK + H+VLLTGTPLQN ++ELF L+
Sbjct: 982 GGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLL 1041
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K+L PK+E I+ V
Sbjct: 1042 HFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEV 1101
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI--- 593
EL++ QK+YY+AIL +N+ L++ G + +L+N +MELRK C HPY+++G E I
Sbjct: 1102 ELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGE 1161
Query: 594 -EDT-NES-----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
DT N + + +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL
Sbjct: 1162 FRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIH 1221
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
K++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 1222 KRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1281
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
NP DLQA AR HR+GQ V ++RL+TR S E M K+ L+ V+ + + N
Sbjct: 1282 NPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRESN 1341
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 1286 (457.8 bits), Expect = 1.4e-129, P = 1.4e-129
Identities = 279/661 (42%), Positives = 402/661 (60%)
Query: 128 IFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFV 185
I +++ VK+K SYLHC W E++ LK + R++ K+ F + + + A+ +
Sbjct: 713 IDTEEFFVKYKNYSYLHCEWATEQQLLK----DKRIQQKIKRFKLRQAQRAHFLADMEEE 768
Query: 186 AIRPEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ VDR+L C +D + YLVK+ L Y++ WE + D+ +IE F
Sbjct: 769 PFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDL--AKIEEF 826
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPEFLSGGSLHPYQLEGLNFLR 298
+Q+ S P D + P +++ + S ++ +G L YQLEGLN+L
Sbjct: 827 EHLQA-----------SRP-DTRHLDRPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLL 874
Query: 299 FSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAP 357
F+W + + ILADEMGLGKTIQSI FL + I P L++APLST+ NWEREF TW
Sbjct: 875 FNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWT- 933
Query: 358 QMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMI 417
+NVV+Y G+ +R +I++YE YF + +F ++T++EMI
Sbjct: 934 DINVVVYHGSLISRQMIQQYEMYF------------RDSQGRIIRGAYRFQAIITTFEMI 981
Query: 418 NLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFML 477
L I+W+C+I+DE HRLKNK+ KL LK + H+VLLTGTPLQN ++ELF L
Sbjct: 982 LGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSL 1041
Query: 478 MHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILR 537
+HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K+L PK+E I+
Sbjct: 1042 LHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIE 1101
Query: 538 VELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-- 593
VEL++ QK+YY+AIL +N+ L++ G + +L+N +MELRK C HPY+++G E I
Sbjct: 1102 VELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILG 1161
Query: 594 --EDT-NES-----FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLT 645
DT N + + +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL
Sbjct: 1162 EFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLI 1221
Query: 646 FKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSD 705
K++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSD
Sbjct: 1222 HKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSD 1281
Query: 706 WNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNI 765
WNP DLQA AR HR+GQ V ++RL+TR S E M K+ L+ V+ + +
Sbjct: 1282 WNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRES 1341
Query: 766 N 766
N
Sbjct: 1342 N 1342
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 1286 (457.8 bits), Expect = 1.4e-129, P = 1.4e-129
Identities = 278/658 (42%), Positives = 401/658 (60%)
Query: 130 VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFH-RQMSSNN---NAEEDFV 185
+++Y VK+K SYLHC W E++ K + R++ K+ F +Q + + EED
Sbjct: 766 IEEYFVKYKNYSYLHCEWATEQQLEK----DKRIQQKIKRFKIKQAQKAHFFADIEED-- 819
Query: 186 AIRPEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERF 239
P++ VDR+L C +D + YLVK+ L Y++ WE D+ Q +IE F
Sbjct: 820 PFNPDYVEVDRVLEVSYCEDKDSGEPVVYYLVKWCSLPYEDSTWELMEDVD--QTKIEEF 877
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRF 299
K+Q+ + N+ + P +++ E S ++ + SL YQLEG+N+L F
Sbjct: 878 KKLQAAKPHT--NRMERPPAS---------HWKKLEKSRKYCNENSLRDYQLEGVNWLLF 926
Query: 300 SWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS-PHLVVAPLSTLRNWEREFATWAPQ 358
+W + + ILADEMGLGKTIQSI FL ++ I P L++APLST+ NWEREF TW
Sbjct: 927 NWYNRRNCILADEMGLGKTIQSITFLEEIYRTGIKGPFLIIAPLSTIANWEREFRTWT-H 985
Query: 359 MNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMIN 418
+NV++Y G+ +R ++++YE Y + +F ++T++EMI
Sbjct: 986 LNVIVYHGSVVSRQMLQQYEMYC------------RDSQGRVIRGAYRFQAVITTFEMIL 1033
Query: 419 LDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLM 478
L I W+C+I+DE HRLKNK+ KL K S H+VLLTGTPLQN ++ELF L+
Sbjct: 1034 GGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLL 1093
Query: 479 HFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
HFL+ +F S F +EF D+ EEQ+ +L +L P +LRR+K+DV K+L PK+E I+ V
Sbjct: 1094 HFLEPTRFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEV 1153
Query: 539 ELSSKQKEYYKAILTRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-ED 595
EL++ QK+YY+AIL +N+ L + G A + +L+N +MELRK C HPY+++G E I ED
Sbjct: 1154 ELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLIKGAEEKIMED 1213
Query: 596 TNESF---------KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
E + + +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL
Sbjct: 1214 FKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQ 1273
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 1274 RRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 1333
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
NP DLQA AR HR+GQ V ++RLITR S E M K+ L+ V+ + ++
Sbjct: 1334 NPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRD 1391
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 1283 (456.7 bits), Expect = 1.9e-129, P = 1.9e-129
Identities = 286/657 (43%), Positives = 399/657 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 619 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 674
Query: 190 EWTTVDRIL-ACRGED-DEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL D D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 675 DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 732
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H K+ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 733 SR-HPEL--KRVNRPQ--ASAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 781
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 782 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 840
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 841 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 888
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 889 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 948
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 949 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 1008
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLE-GVEPDI-EDTNE 598
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E
Sbjct: 1009 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFRE 1068
Query: 599 S---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
+ + ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 1069 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1128
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1129 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1188
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 1189 NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 1245
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 1283 (456.7 bits), Expect = 2.0e-129, P = 2.0e-129
Identities = 286/657 (43%), Positives = 399/657 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 666 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 721
Query: 190 EWTTVDRIL-ACRGED-DEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL D D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 722 DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 779
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H K+ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 780 SR-HPEL--KRVNRPQ--ASAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 828
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 829 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 887
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 888 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 935
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 936 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 995
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 996 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 1055
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLE-GVEPDI-EDTNE 598
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E
Sbjct: 1056 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFRE 1115
Query: 599 S---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
+ + ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 1116 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1175
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1176 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1235
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 1236 NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 1292
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 1283 (456.7 bits), Expect = 2.1e-129, P = 2.1e-129
Identities = 286/657 (43%), Positives = 399/657 (60%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNA-EEDFVAIRP 189
+++ VK+K SYLHC W + + + R+ K+ F +M+ + ED P
Sbjct: 666 EEFFVKYKNYSYLHCEWAT----ISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP 721
Query: 190 EWTTVDRIL-ACRGED-DEKE----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
++ VDRIL D D E YLVK+ L Y++ WE + D+ + +I F +IQ
Sbjct: 722 DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVD--EGKIREFKRIQ 779
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
SR H K+ + PQ + KK E S E+ + L YQLEG+N+L F+W
Sbjct: 780 SR-HPEL--KRVNRPQ--ASAWKK------LELSHEYKNRNQLREYQLEGVNWLLFNWYN 828
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVV 362
+ + ILADEMGLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN +
Sbjct: 829 RQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTI 887
Query: 363 MYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA 422
+Y G+ +R +I++YE Y KFD L+T++EMI D
Sbjct: 888 VYHGSLASRQMIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCP 935
Query: 423 SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L+ I+W+C+I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+
Sbjct: 936 ELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLE 995
Query: 483 AGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSS 542
+F S EF ++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++
Sbjct: 996 PSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTN 1055
Query: 543 KQKEYYKAILTRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLE-GVEPDI-EDTNE 598
QK+YY+AIL +N+ L++ G +L+N +MELRK C HPY++ G E I + E
Sbjct: 1056 IQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINAGAEEKILTEFRE 1115
Query: 599 S---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
+ + ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++
Sbjct: 1116 ACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRY 1175
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
YERIDG+V G RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP
Sbjct: 1176 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ 1235
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 1236 NDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 1292
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 1232 (438.7 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 286/693 (41%), Positives = 411/693 (59%)
Query: 94 ECVSPLND--IDKILDCEMRPTVAGDSDVSKLGSKQIFVKQYL--VKWKGLSYLHCTWVP 149
+ + P N+ ID ++D ++ + + K G +I YL +KW S+LH TW
Sbjct: 163 QAIEPENERGIDIVMDHKLN-----EENAEKTGDPKI---DYLFKIKWTDASHLHNTWEK 214
Query: 150 EKEFLKAFKSNPRLRTKVNNF--HRQMSSNN--NAEEDFVAI----------RPEWTTVD 195
++ LK+FK +L + F + N+ +ED A+ + E+T V+
Sbjct: 215 YQD-LKSFKGFRKLDNYIKQFIIYDDEIRNDPLTTKEDLEAMDIERERKRDEQDEYTHVE 273
Query: 196 RILAC-RGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ 254
RI+ R E D+ E ++Y + + Y++ S A EI + Q ++ N +
Sbjct: 274 RIVDSERVETDDGETKLQYF-VKWKRLYYDECSWEDA--EEIAKIAPEQVTKYQQRLNSK 330
Query: 255 KSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMG 314
+ F++ P F+ G L +QL GLN++ F WS+ + ILADEMG
Sbjct: 331 ILPSLSANYPLSQRPRFEKLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMG 390
Query: 315 LGKTIQSIAFLASL-FGERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARN 372
LGKT+Q++AFL+ L + R + PHLVV PLST+ W+ F WAP +N V Y+G +AR
Sbjct: 391 LGKTVQTVAFLSWLIYARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARK 450
Query: 373 IIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI-KFDVLLTSYEMINLDSASLKPIKWQC 431
IREYE Y Q+R KF+VLLT+YE I D L KWQ
Sbjct: 451 TIREYELY--------------------NQNRKPKFNVLLTTYEYILKDKNELGAFKWQF 490
Query: 432 MIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 491
+ VDE HRLKN +S L+ +LK + +R+L+TGTPLQNN+ EL L +FL GKF +E
Sbjct: 491 LAVDEAHRLKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQE 550
Query: 492 FQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
E D QE+ I L + ++P +LRR+KKDV K LP K E ILRVELS Q EYYK I
Sbjct: 551 IDFETIDSEQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNI 610
Query: 552 LTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIEDT------NESFKQLL 604
+T+NY L G+QISL+N++ EL+K HPY+ +G E + D + K ++
Sbjct: 611 ITKNYAALNAGNRGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIV 670
Query: 605 ESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQ 664
SSGK+ LL++++ +L+++GHRVLI+SQ MLD+L DY+ K +Q++R+DG V ++R+
Sbjct: 671 MSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRK 730
Query: 665 IRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 724
I ID FNA S F FLLSTRAGGLGINL TADTVII+DSDWNP ADLQAMARAHR+GQ
Sbjct: 731 IAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQK 790
Query: 725 NKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
N V ++R +++ ++EE++++ +KKMVLE+ ++
Sbjct: 791 NHVSVYRFVSKDTVEEQILERARKKMVLEYAII 823
Score = 50 (22.7 bits), Expect = 1.6e-128, Sum P(2) = 1.6e-128
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 7 RLRVRSDRKPIYQLDESDDDADFEQGKP 34
R R++++ Y +D +DDAD + +P
Sbjct: 120 RFSSRNNKQVNYAIDYDEDDADLLESEP 147
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 1261 (449.0 bits), Expect = 1.7e-128, P = 1.7e-128
Identities = 278/651 (42%), Positives = 394/651 (60%)
Query: 130 VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFVAI 187
++++ VK++ SYLHC W +E K +PR+ K+ F + + + E D
Sbjct: 237 MEEFYVKYRNFSYLHCKWATLEELEK----DPRISQKIKRFRNKQAQMKHIFTEPDEDLF 292
Query: 188 RPEWTTVDRILAC---RGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERFIK 241
P++ VDRIL + D +E YLVK+ L Y+E WE E D+ + I+ F
Sbjct: 293 NPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPVK--IKEFEA 350
Query: 242 IQSRSHRSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPEFLSGGSLHPYQLEGLNFLRFS 300
+Q P ++ + E +Q+ E S E+ + L YQLEG+N+L F+
Sbjct: 351 LQI-------------PPEIKHMERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFN 397
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQM 359
W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF TW +M
Sbjct: 398 WYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWT-EM 456
Query: 360 NVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINL 419
N ++Y G+ +R +I++YE + KF V++T++EMI
Sbjct: 457 NAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGI------------FKFQVVITTFEMILA 504
Query: 420 DSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMH 479
D LK I+W+C+++DE HRLKN++ KL LK + H+VLLTGTPLQN+++ELF L++
Sbjct: 505 DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 564
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E I+ VE
Sbjct: 565 FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 624
Query: 540 LSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEPDI-ED 595
L++ QK+YY+AIL +N+ L++ G Q + LIN +MELRK C HPY++ G E I ED
Sbjct: 625 LTNIQKKYYRAILEKNFSFLSK-GANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 683
Query: 596 TNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LEDYL
Sbjct: 684 FRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQ 743
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 744 RRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 803
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
NP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 804 NPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL 854
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 1261 (449.0 bits), Expect = 1.5e-127, P = 1.5e-127
Identities = 278/651 (42%), Positives = 394/651 (60%)
Query: 130 VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFVAI 187
++++ VK++ SYLHC W +E K +PR+ K+ F + + + E D
Sbjct: 112 MEEFYVKYRNFSYLHCKWATLEELEK----DPRISQKIKRFRNKQAQMKHIFTEPDEDLF 167
Query: 188 RPEWTTVDRILAC---RGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERFIK 241
P++ VDRIL + D +E YLVK+ L Y+E WE E D+ + I+ F
Sbjct: 168 NPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPVK--IKEFEA 225
Query: 242 IQSRSHRSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPEFLSGGSLHPYQLEGLNFLRFS 300
+Q P ++ + E +Q+ E S E+ + L YQLEG+N+L F+
Sbjct: 226 LQI-------------PPEIKHMERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFN 272
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQM 359
W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF TW +M
Sbjct: 273 WYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWT-EM 331
Query: 360 NVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINL 419
N ++Y G+ +R +I++YE + KF V++T++EMI
Sbjct: 332 NAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGI------------FKFQVVITTFEMILA 379
Query: 420 DSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMH 479
D LK I+W+C+++DE HRLKN++ KL LK + H+VLLTGTPLQN+++ELF L++
Sbjct: 380 DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 439
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E I+ VE
Sbjct: 440 FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 499
Query: 540 LSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEPDI-ED 595
L++ QK+YY+AIL +N+ L++ G Q + LIN +MELRK C HPY++ G E I ED
Sbjct: 500 LTNIQKKYYRAILEKNFSFLSK-GANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 558
Query: 596 TNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LEDYL
Sbjct: 559 FRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQ 618
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 619 RRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 678
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
NP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 679 NPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL 729
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 1261 (449.0 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 278/651 (42%), Positives = 394/651 (60%)
Query: 130 VKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFVAI 187
++++ VK++ SYLHC W +E K +PR+ K+ F + + + E D
Sbjct: 112 MEEFYVKYRNFSYLHCKWATLEELEK----DPRISQKIKRFRNKQAQMKHIFTEPDEDLF 167
Query: 188 RPEWTTVDRILAC---RGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERFIK 241
P++ VDRIL + D +E YLVK+ L Y+E WE E D+ + I+ F
Sbjct: 168 NPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPVK--IKEFEA 225
Query: 242 IQSRSHRSSCNKQKSSPQDVTESTKKPKE-FQQYEHSPEFLSGGSLHPYQLEGLNFLRFS 300
+Q P ++ + E +Q+ E S E+ + L YQLEG+N+L F+
Sbjct: 226 LQI-------------PPEIKHMERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFN 272
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQM 359
W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF TW +M
Sbjct: 273 WYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWT-EM 331
Query: 360 NVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINL 419
N ++Y G+ +R +I++YE + KF V++T++EMI
Sbjct: 332 NAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGI------------FKFQVVITTFEMILA 379
Query: 420 DSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMH 479
D LK I+W+C+++DE HRLKN++ KL LK + H+VLLTGTPLQN+++ELF L++
Sbjct: 380 DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN 439
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E I+ VE
Sbjct: 440 FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE 499
Query: 540 LSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEPDI-ED 595
L++ QK+YY+AIL +N+ L++ G Q + LIN +MELRK C HPY++ G E I ED
Sbjct: 500 LTNIQKKYYRAILEKNFSFLSK-GANQHNMPNLINTMMELRKCCNHPYLINGAEEKILED 558
Query: 596 TNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LEDYL
Sbjct: 559 FRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQ 618
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
+++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II+DSDW
Sbjct: 619 RRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW 678
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
NP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 679 NPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL 729
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 1260 (448.6 bits), Expect = 6.7e-127, P = 6.7e-127
Identities = 285/685 (41%), Positives = 399/685 (58%)
Query: 124 GSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AE 181
G ++ + VK++ SYLHC W +E K +PR+ K+ F + + + E
Sbjct: 309 GEPPFDLELFYVKYRNFSYLHCKWATMEELEK----DPRIAQKIKRFRNKQAQMKHIFTE 364
Query: 182 EDFVAIRPEWTTVDRIL-ACRGEDDEK-----EYLVKYKELSYDECYWEYESDISAFQPE 235
D P++ VDR+L +D E YLVK+ L Y+E WE E D+ +
Sbjct: 365 PDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP--AK 422
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLN 295
++ F +Q + S +Q+ E S E+ + L YQLEG+N
Sbjct: 423 VKEFESLQVLPEIKHVERPASD------------SWQKLEKSREYKNSNQLREYQLEGMN 470
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFAT 354
+L F+W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF T
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRT 530
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W +MN ++Y G+ +R +I++YE + KF V++T++
Sbjct: 531 WT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV------------FKFHVVITTF 577
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EMI D LK I W C+I+DE HRLKN++ KL LK + H+VLLTGTPLQN+++EL
Sbjct: 578 EMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
F L++FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E
Sbjct: 638 FSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQET 697
Query: 535 ILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEP 591
I+ VEL++ QK+YY+AIL +N+ LT+ G Q + LIN +MELRK C HPY++ G E
Sbjct: 698 IIEVELTNIQKKYYRAILEKNFSFLTK-GANQHNMPNLINTMMELRKCCNHPYLINGAEE 756
Query: 592 DI-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
I ED ++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LE
Sbjct: 757 KILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILE 816
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DYL +++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II
Sbjct: 817 DYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCII 876
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLK 761
+DSDWNP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL---- 932
Query: 762 AQNINQVTIFFQTWRLLSCSVEGIL 786
Q+IN+ +L VE +L
Sbjct: 933 -QDINRKGSTNGVQQLSKMEVEDLL 956
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 1260 (448.6 bits), Expect = 6.7e-127, P = 6.7e-127
Identities = 285/685 (41%), Positives = 399/685 (58%)
Query: 124 GSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AE 181
G ++ + VK++ SYLHC W +E K +PR+ K+ F + + + E
Sbjct: 309 GEPPFDLELFYVKYRNFSYLHCKWATMEELEK----DPRIAQKIKRFRNKQAQMKHIFTE 364
Query: 182 EDFVAIRPEWTTVDRIL-ACRGEDDEK-----EYLVKYKELSYDECYWEYESDISAFQPE 235
D P++ VDR+L +D E YLVK+ L Y+E WE E D+ +
Sbjct: 365 PDEDLFNPDYVEVDRVLEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP--AK 422
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLN 295
++ F +Q + S +Q+ E S E+ + L YQLEG+N
Sbjct: 423 VKEFESLQVLPEIKHVERPASD------------SWQKLEKSREYKNSNQLREYQLEGMN 470
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFAT 354
+L F+W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF T
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRT 530
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W +MN ++Y G+ +R +I++YE + KF V++T++
Sbjct: 531 WT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV------------FKFHVVITTF 577
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EMI D LK I W C+I+DE HRLKN++ KL LK + H+VLLTGTPLQN+++EL
Sbjct: 578 EMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
F L++FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E
Sbjct: 638 FSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQET 697
Query: 535 ILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEP 591
I+ VEL++ QK+YY+AIL +N+ LT+ G Q + LIN +MELRK C HPY++ G E
Sbjct: 698 IIEVELTNIQKKYYRAILEKNFSFLTK-GANQHNMPNLINTMMELRKCCNHPYLINGAEE 756
Query: 592 DI-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
I ED ++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LE
Sbjct: 757 KILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILE 816
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DYL +++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II
Sbjct: 817 DYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCII 876
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLK 761
+DSDWNP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL---- 932
Query: 762 AQNINQVTIFFQTWRLLSCSVEGIL 786
Q+IN+ +L VE +L
Sbjct: 933 -QDINRKGSTNGVQQLSKMEVEDLL 956
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 1260 (448.6 bits), Expect = 6.7e-127, P = 6.7e-127
Identities = 279/656 (42%), Positives = 388/656 (59%)
Query: 124 GSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AE 181
G ++ + VK++ SYLHC W +E K +PR+ K+ F + + + E
Sbjct: 309 GEPPFDLELFYVKYRNFSYLHCKWATMEELEK----DPRIAQKIKRFRNKQAQMKHIFTE 364
Query: 182 EDFVAIRPEWTTVDRIL-ACRGEDDEK-----EYLVKYKELSYDECYWEYESDISAFQPE 235
D P++ VDRIL +D E YLVK+ L Y+E WE E D+ +
Sbjct: 365 PDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP--AK 422
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLN 295
++ F +Q + S +Q+ E S E+ + L YQLEG+N
Sbjct: 423 VKEFESLQVLPEIKHVERPASD------------SWQKLEKSREYKNSNQLREYQLEGMN 470
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFAT 354
+L F+W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF T
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRT 530
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W +MN ++Y G+ +R +I++YE + KF V++T++
Sbjct: 531 WT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV------------FKFHVVITTF 577
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EMI D LK I W C+I+DE HRLKN++ KL LK + H+VLLTGTPLQN+++EL
Sbjct: 578 EMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
F L++FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E
Sbjct: 638 FSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQET 697
Query: 535 ILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEP 591
I+ VEL++ QK+YY+AIL +N+ LT+ G Q + LIN +MELRK C HPY++ G E
Sbjct: 698 IIEVELTNIQKKYYRAILEKNFSFLTK-GANQHNMPNLINTMMELRKCCNHPYLINGAEE 756
Query: 592 DI-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
I ED ++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LE
Sbjct: 757 KILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILE 816
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DYL +++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II
Sbjct: 817 DYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCII 876
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
+DSDWNP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL 932
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 1257 (447.5 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 285/685 (41%), Positives = 399/685 (58%)
Query: 124 GSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AE 181
G ++ + VK++ SYLHC W +E K +PR+ K+ F + + + E
Sbjct: 308 GEPPFDLELFYVKYRNFSYLHCKWATMEELEK----DPRIAQKIKRFRNKQAQMKHIFTE 363
Query: 182 EDFVAIRPEWTTVDRIL-ACRGEDDEK-----EYLVKYKELSYDECYWEYESDISAFQPE 235
D P++ VDRIL +D E YLVK+ L Y+E WE E D+ +
Sbjct: 364 PDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP--AK 421
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLN 295
++ F +Q + S +Q+ E S E+ + L YQLEG+N
Sbjct: 422 VKEFESLQVLPEIKHVERPASD------------SWQKLEKSREYKNSNQLREYQLEGMN 469
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFAT 354
+L F+W + + ILADEMGLGKTIQSI FL+ +F I P L++APLST+ NWEREF T
Sbjct: 470 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRT 529
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W +MN ++Y G+ +R +I++YE + KF V++T++
Sbjct: 530 WT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGV------------FKFHVVITTF 576
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EMI D LK I W C+I+DE HRLKN++ KL LK + H+VLLTGTPLQN+++EL
Sbjct: 577 EMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 636
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
F L++FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E
Sbjct: 637 FSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQET 696
Query: 535 ILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEP 591
I+ VEL++ QK+YY+AIL +N+ L++ G Q + LIN +MELRK C HPY++ G E
Sbjct: 697 IIEVELTNIQKKYYRAILEKNFSFLSK-GANQHNMPNLINTMMELRKCCNHPYLISGAEE 755
Query: 592 DI-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
I ED ++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LE
Sbjct: 756 KILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILE 815
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DYL +++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II
Sbjct: 816 DYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCII 875
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLK 761
+DSDWNP DLQA AR HR+GQ+ V ++RLITR S E M K+ L+ V+
Sbjct: 876 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVL---- 931
Query: 762 AQNINQVTIFFQTWRLLSCSVEGIL 786
Q+IN+ +L VE +L
Sbjct: 932 -QDINRKGSTNGVQQLSKMEVEDLL 955
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 1208 (430.3 bits), Expect = 1.2e-125, Sum P(2) = 1.2e-125
Identities = 279/639 (43%), Positives = 393/639 (61%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + SK+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 299 GDPNAGFEKSKEPGDVQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 355
Query: 176 SNN----NAEEDFVA-----------IRPEWTTVDRILACRGEDDEK---EYLVKYKELS 217
NA + V + ++ V+RI+A + +Y K++ L
Sbjct: 356 ETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGLPDYYCKWQGLP 415
Query: 218 YDECYWEYESDISA-FQPEIERFIKIQSRSHRSSCNKQKSSP-QDVTESTKKPKEFQQYE 275
Y EC WE + IS FQ I+ + SR N+ K++P +D ++P+ F +
Sbjct: 416 YSECSWEDGALISKKFQTCIDEYF---SR------NQSKTTPFKDCKVLKQRPR-FVALK 465
Query: 276 HSPEFLSG--G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER 332
P ++ G G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E
Sbjct: 466 KQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEH 525
Query: 333 --ISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXX 390
P L+V PLSTL +W+RE TWA QMN V+Y+G +RN+IR +E+ P
Sbjct: 526 QLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTK----- 580
Query: 391 XXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSS 450
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +
Sbjct: 581 -------------RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKT 627
Query: 451 LKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHR 510
L + + HR+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+
Sbjct: 628 LIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHK 686
Query: 511 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISL 569
L P LLRRVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+
Sbjct: 687 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGF 746
Query: 570 INVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVL 628
+N++MEL+K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVL
Sbjct: 747 LNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVL 806
Query: 629 IYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGG 688
I+SQ MLD+L +YL ++++ ++R+DG +G RQ +D FNA S FCFLLSTRAGG
Sbjct: 807 IFSQMVRMLDILAEYLKYRQFPFQRLDGSIGELRRQA-LDHFNAXGSEDFCFLLSTRAGG 865
Query: 689 LGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 727
LGINLA+ADTV+I+DSDWNP DLQA ARAHR+GQ +V
Sbjct: 866 LGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 904
Score = 47 (21.6 bits), Expect = 1.2e-125, Sum P(2) = 1.2e-125
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 19 QLD--ESDDDADFEQGKPGT----TVE---KFERIVRIDAKDDSCQACGE 59
Q+D E +DD D++ K + TV K + ++ D+ DD + CGE
Sbjct: 211 QIDSSEDEDDEDYDNDKRSSRRQATVNVSYKEDEEMKTDS-DDLLEVCGE 259
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 870 (311.3 bits), Expect = 1.7e-125, Sum P(3) = 1.7e-125
Identities = 174/359 (48%), Positives = 253/359 (70%)
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
R+KF++LLT+YE++ D + L + W + VDE HRLKN DS L+ +L T + +
Sbjct: 579 RLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVT----IDS 634
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKD 523
T + + L+HF+ KF S E+F+EE +E + LH+ L P LLRRVKKD
Sbjct: 635 DTAPSCTIPQELWLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKD 693
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELRKLCCH 582
V K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+K C H
Sbjct: 694 VEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 753
Query: 583 PYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ MLD+L
Sbjct: 754 CYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILA 813
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
+YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 814 EYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI 873
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+HLV+ R+
Sbjct: 874 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 932
Score = 387 (141.3 bits), Expect = 1.7e-125, Sum P(3) = 1.7e-125
Identities = 103/289 (35%), Positives = 153/289 (52%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTKVNNFH 171
GD + SK++ QYL+KWKG S++H TW E+ +K K + K
Sbjct: 298 GDPNAGFEKSKELGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETK 357
Query: 172 RQMSSNN-------NAEEDFVA-IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDE 220
R + + + N +++ + ++ V+RI+A + +Y K++ L Y E
Sbjct: 358 RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE 417
Query: 221 CYWEYESDISA-FQPEIERFIKIQSRSHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSP 278
C WE + I+ FQ I+ + SR N+ K++P +D ++P+ F + P
Sbjct: 418 CSWEDGALIAKKFQARIDEYF---SR------NQSKTTPFKDCKVLKQRPR-FVALKKQP 467
Query: 279 EFLSGGS---LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER--I 333
++ G L YQL GL +L SW K ILADEMGLGKTIQ+I+FL LF E
Sbjct: 468 SYIGGHESLELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLY 526
Query: 334 SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFP 382
P L+V PLSTL +W+RE TWAPQMN V+Y+G +RN+IR +E+ P
Sbjct: 527 GPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHP 575
Score = 47 (21.6 bits), Expect = 1.7e-125, Sum P(3) = 1.7e-125
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 21 DESDDDADFEQ--GKPGTTVE---KFERIVRIDAKDDSCQACGE 59
+E DDD D+++ + TV K + D+ DD + CGE
Sbjct: 216 EEEDDDEDYDKRGSRRQATVNVSYKEAEETKTDS-DDLLEVCGE 258
Score = 45 (20.9 bits), Expect = 6.9e-31, Sum P(3) = 6.9e-31
Identities = 10/51 (19%), Positives = 27/51 (52%)
Query: 495 EFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQK 545
E D + +E+ ++ + HL +++K + E P+ ++ ++ E K++
Sbjct: 1355 EKSDEDDDEEDNKDEIVSVKHLHKKIKTEKENEEKPEPDIGIKKEAEEKRE 1405
Score = 41 (19.5 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQK 545
+VK+ KE K+E + ++ +K+K
Sbjct: 1440 KVKESTQKEKEVKEEKVNEIKSENKEK 1466
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 1246 (443.7 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 270/657 (41%), Positives = 403/657 (61%)
Query: 117 DSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFH-RQMS 175
+S+ +++ ++ V+Q+L+KWKG SY+HC W E L+ K R+ K+ F ++MS
Sbjct: 1046 ESETNEIEEEE--VEQFLIKWKGRSYVHCEWKTAAELLEIDK---RVEAKIKRFKVKKMS 1100
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEY-LVKYKELSYDECYWEYESDISAFQP 234
S +EDF ++ VDR++ EDD +E+ L+K+K L Y+E WE I A +
Sbjct: 1101 SYIEDDEDF---NSDFVIVDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEPIEMIPADKV 1157
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTK-KPKEFQQYEHSPEFLSGGSLHPYQLEG 293
E+ R +Q P + E + +P+E+++ S + +G SL YQ EG
Sbjct: 1158 ELWR-------------ERQVIDPAKIREKQRPEPEEWKKMSTSKVWKNGNSLREYQFEG 1204
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+++L + + + ILADEMGLGKT+Q+I FL+ ++ I P LVV PLST++NW REF
Sbjct: 1205 VDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDYGIHGPFLVVVPLSTIQNWVREF 1264
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
TW MN ++Y G++ AR ++++YE ++ ++ +K D L+T
Sbjct: 1265 ETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWK---------KNFVKIDALIT 1314
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLF-SSLKQYSTRHRVLLTGTPLQNNL 471
++E + D LK I W+ ++DE HRLKN++ KL + L + HRVLLTGTPLQNN+
Sbjct: 1315 TFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNI 1374
Query: 472 DELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
DELF L++FL +F + F E+F ++Q+ +L +L P +LRR+K+DV K L PK
Sbjct: 1375 DELFSLLNFLHPQQFDNSATFLEQFGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPK 1434
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVE- 590
+E I+ V+LS QK++Y+AIL RN+ L + G + SL+NV+MELRK C HP+++ G E
Sbjct: 1435 EETIIEVQLSDMQKKFYRAILERNFSHLCK-GTSAPSLMNVMMELRKCCNHPFLINGAEE 1493
Query: 591 ----------PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
PD ++ + K L+++SGK+ L++K++ KL++ GH+VLI+SQ +LDLL
Sbjct: 1494 AIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLL 1553
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
E++L + +ERIDG V G RQ IDRF+ +NS RF FLL TRAGGLGINL ADTVI
Sbjct: 1554 EEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVI 1613
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
I+DSDWNP DLQA AR HR+GQ V ++RLIT + E M K+ L+ V+
Sbjct: 1614 IFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFDKASLKLGLDKAVL 1670
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 865 (309.6 bits), Expect = 5.9e-125, Sum P(3) = 5.9e-125
Identities = 176/359 (49%), Positives = 252/359 (70%)
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
R+KF++LLT+YE++ D + L + W + VDE HRLKN DS L+ +L T +
Sbjct: 579 RLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVT---IDSD 635
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKD 523
P EL+ L HF+ KF S E+F+EE +E + LH+ L P LLRRVKKD
Sbjct: 636 TAPSCTIPQELWSL-HFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLRRVKKD 693
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELRKLCCH 582
V K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+K C H
Sbjct: 694 VEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH 753
Query: 583 PYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ MLD+L
Sbjct: 754 CYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILA 813
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
+YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 814 EYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI 873
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+HLV+ R+
Sbjct: 874 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 932
Score = 387 (141.3 bits), Expect = 5.9e-125, Sum P(3) = 5.9e-125
Identities = 103/289 (35%), Positives = 153/289 (52%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTKVNNFH 171
GD + SK++ QYL+KWKG S++H TW E+ +K K + K
Sbjct: 298 GDPNAGFEKSKELGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETK 357
Query: 172 RQMSSNN-------NAEEDFVA-IRPEWTTVDRILACRGEDDEK---EYLVKYKELSYDE 220
R + + + N +++ + ++ V+RI+A + +Y K++ L Y E
Sbjct: 358 RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE 417
Query: 221 CYWEYESDISA-FQPEIERFIKIQSRSHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSP 278
C WE + I+ FQ I+ + SR N+ K++P +D ++P+ F + P
Sbjct: 418 CSWEDGALIAKKFQARIDEYF---SR------NQSKTTPFKDCKVLKQRPR-FVALKKQP 467
Query: 279 EFLSGGS---LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER--I 333
++ G L YQL GL +L SW K ILADEMGLGKTIQ+I+FL LF E
Sbjct: 468 SYIGGHESLELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLY 526
Query: 334 SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFP 382
P L+V PLSTL +W+RE TWAPQMN V+Y+G +RN+IR +E+ P
Sbjct: 527 GPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHP 575
Score = 47 (21.6 bits), Expect = 5.9e-125, Sum P(3) = 5.9e-125
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 21 DESDDDADFEQ--GKPGTTVE---KFERIVRIDAKDDSCQACGE 59
+E DDD D+++ + TV K + D+ DD + CGE
Sbjct: 216 EEEDDDEDYDKRGSRRQATVNVSYKEAEETKTDS-DDLLEVCGE 258
Score = 45 (20.9 bits), Expect = 6.9e-31, Sum P(3) = 6.9e-31
Identities = 10/51 (19%), Positives = 27/51 (52%)
Query: 495 EFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQK 545
E D + +E+ ++ + HL +++K + E P+ ++ ++ E K++
Sbjct: 1354 EKSDEDDDEEDNKDEIVSVKHLHKKIKTEKENEEKPEPDIGIKKEAEEKRE 1404
Score = 41 (19.5 bits), Expect = 1.8e-30, Sum P(3) = 1.8e-30
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQK 545
+VK+ KE K+E + ++ +K+K
Sbjct: 1439 KVKESTQKEKEVKEEKVNEIKSENKEK 1465
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 732 (262.7 bits), Expect = 3.7e-123, Sum P(3) = 3.7e-123
Identities = 151/342 (44%), Positives = 219/342 (64%)
Query: 270 EFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF 329
++Q+ E S E+ + +L YQLEG+N+L F+W + ILADEMGLGKTIQSI FL ++
Sbjct: 996 DWQKSESSREYKNANALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIY 1055
Query: 330 GERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXX 388
+ I P LV+APLST+ NWEREF TW ++NVV+Y G+ +R I+ YE Y+
Sbjct: 1056 LKGIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRKTIQAYEMYY------- 1107
Query: 389 XXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLF 448
+ KF ++T++EMI D L+ + W+C+I+DE HRLKN++ KL
Sbjct: 1108 -----RDTQGRIIKGAYKFHAVITTFEMILTDCPELRNVPWRCVIIDEAHRLKNRNCKLL 1162
Query: 449 SSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRL 508
LK H+VLLTGTPLQN ++ELF L++FL+ +F S F +EF D+ EEQ+ +L
Sbjct: 1163 EGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFMQEFGDLKTEEQVQKL 1222
Query: 509 HRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG----- 563
+L P +LRR+K+DV K L PK+E I+ VEL++ QK+YY+AIL +N+ L++ G
Sbjct: 1223 QGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGS 1282
Query: 564 ----GAQI-SLINVVMELRKLCCHPYMLEGVEPDI-EDTNES 599
G+ + +L+N +MELRK C HPY++ G E I E+ E+
Sbjct: 1283 GGGGGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRET 1324
Score = 517 (187.1 bits), Expect = 3.7e-123, Sum P(3) = 3.7e-123
Identities = 111/223 (49%), Positives = 147/223 (65%)
Query: 563 GGAQI-SLINVVMELRKLCCHPYMLEGVEPDI-EDTNES---------FKQLLESSGKLQ 611
GG+ + +L+N +MELRK C HPY++ G E I E+ E+ + +++++GKL
Sbjct: 1286 GGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGKLV 1345
Query: 612 LLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFN 671
L+DK++ KLK GHRVLI+SQ LD+LEDYL +++ YERIDG+V G RQ IDRF+
Sbjct: 1346 LIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFS 1405
Query: 672 AKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFR 731
+S RF FLL TRAGGLGINL ADT II+DSDWNP DLQA AR HR+GQ+ V I+R
Sbjct: 1406 RPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYR 1465
Query: 732 LITRGSIEERMMQMTKKKMVLEHLVV----GRLKAQN-INQVT 769
LITR S E M K+ L+ V+ GR A N + Q++
Sbjct: 1466 LITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLS 1508
Score = 442 (160.7 bits), Expect = 1.5e-86, Sum P(3) = 1.5e-86
Identities = 111/307 (36%), Positives = 168/307 (54%)
Query: 83 KAPPSGSWR-CPECVSPLNDIDKILDCEMRPTVAGDSDVSKLGSKQIFVKQYLVKWKGLS 141
K+P + + P+ P+ ++KI+ M G +++ ++I V+++ VK+KG S
Sbjct: 828 KSPTTSEQQELPDAEGPV--VEKIMGMRM-----GKKELAS--GEEIEVEEFYVKFKGFS 878
Query: 142 YLHCTWVPEKEFLKAFKSNPRLRTKVNNFH-RQMSSNNNAEEDFVAIRPEWTTVDRILAC 200
YLHC W +E K + R++ K+ F +Q S E D P++ VDR+L
Sbjct: 879 YLHCRWADIEELEK----DKRIQQKIKRFRAKQALSTFVTEMDDEPFNPDYVEVDRVLDV 934
Query: 201 RGEDDEKE-----YLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQK 255
DE YLVK+ L Y++ WE ++DI Q +IE F ++ +R
Sbjct: 935 SESTDENGELVTLYLVKWCSLPYEDSTWELKADID--QVKIEEFERVMARE--------- 983
Query: 256 SSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGL 315
PQ ++Q+ E S E+ + +L YQLEG+N+L F+W + ILADEMGL
Sbjct: 984 --PQLKRVERPPTSDWQKSESSREYKNANALREYQLEGVNWLLFNWYNTRNCILADEMGL 1041
Query: 316 GKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNII 374
GKTIQSI FL ++ + I P LV+APLST+ NWEREF TW ++NVV+Y G+ +R I
Sbjct: 1042 GKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRKTI 1100
Query: 375 REYEFYF 381
+ YE Y+
Sbjct: 1101 QAYEMYY 1107
Score = 48 (22.0 bits), Expect = 3.7e-123, Sum P(3) = 3.7e-123
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 82 LKAPPSGSWRCPECVSPLNDI 102
L PP GS+ P +SP+ ++
Sbjct: 412 LPPPPQGSYSSPPSMSPMRNL 432
Score = 40 (19.1 bits), Expect = 2.6e-122, Sum P(3) = 2.6e-122
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 2 SSLVERLRVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFE 42
S V+R R D + +++ + DD D K TT E+ E
Sbjct: 799 SRQVKRKRYTEDLE--FRISDDDDGDDSAGPKSPTTSEQQE 837
Score = 37 (18.1 bits), Expect = 2.1e-35, Sum P(3) = 2.1e-35
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINV 572
D+ +P ++L+L KQK + + I T G ++ ++N+
Sbjct: 2704 DMPGYVPKNEDLLLSQFAKPKQKRH-RCRNPNKIDINTLTGEERVPVVNI 2752
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 1173 (418.0 bits), Expect = 9.5e-122, Sum P(2) = 9.5e-122
Identities = 245/529 (46%), Positives = 338/529 (63%)
Query: 254 QKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
Q S P P +++ EHS E+ +G L YQLEGLN+L F+W + + ILADEM
Sbjct: 825 QASRPDSRRLDRPPPNSWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEM 884
Query: 314 GLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARN 372
GLGKTIQSI FL + I P L++APLST+ NWEREF TW +NVV+Y G+ +R
Sbjct: 885 GLGKTIQSITFLYEILLSGIRGPFLIIAPLSTITNWEREFRTWT-DLNVVVYHGSMISRQ 943
Query: 373 IIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCM 432
+I++YE YF + +F ++T++EMI L I+W+C+
Sbjct: 944 MIQQYEMYF------------RDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCV 991
Query: 433 IVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF 492
I+DE HRLKN++ KL LK + H+VLLTGTPLQN ++ELF L+HFL+ +F + F
Sbjct: 992 IIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTF 1051
Query: 493 QEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 552
+EF D+ EEQ+ +L +L P +LRR+K+DV K+L PK+E I+ VEL++ QK+YY+AIL
Sbjct: 1052 MQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAIL 1111
Query: 553 TRNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-----EDTNES-----F 600
+N+ L++ G A + +L+N +MELRK C HPY+++G E I E N +
Sbjct: 1112 EKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTAPDFHL 1171
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ +++S+GKL L+DK++ K+K GH+VLI+SQ LD+LEDYL K++ YERIDG+V G
Sbjct: 1172 QAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRG 1231
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQ-AMARAH 719
RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP DLQ A AR H
Sbjct: 1232 NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCH 1291
Query: 720 RLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQV 768
R+GQ V ++RLITR S E M K+ L+ V+ + + N V
Sbjct: 1292 RIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRE-NSV 1339
Score = 444 (161.4 bits), Expect = 7.9e-38, P = 7.9e-38
Identities = 100/260 (38%), Positives = 149/260 (57%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNN--AEEDFVAIR 188
+++ VK+K SYLHC W E++ LK + R++ K+ F + + + A+ +
Sbjct: 711 EEFFVKYKNYSYLHCEWATEQQLLK----DKRIQQKIKRFKLRQAQRAHFFADMEEEPFN 766
Query: 189 PEWTTVDRILA---CRGEDDEKE---YLVKYKELSYDECYWEYESDISAFQPEIERFIKI 242
P++ VDR+L C +D + YLVK+ L Y++ WE + D+ Q +IE F ++
Sbjct: 767 PDYVEVDRVLEVSLCEDKDTGEPVVYYLVKWCSLPYEDSTWELKEDVD--QAKIEEFEQL 824
Query: 243 QSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWS 302
Q+ S P P +++ EHS E+ +G L YQLEGLN+L F+W
Sbjct: 825 QA-----------SRPDSRRLDRPPPNSWKKIEHSREYKNGNQLREYQLEGLNWLLFNWY 873
Query: 303 KQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNV 361
+ + ILADEMGLGKTIQSI FL + I P L++APLST+ NWEREF TW +NV
Sbjct: 874 NRRNCILADEMGLGKTIQSITFLYEILLSGIRGPFLIIAPLSTITNWEREFRTWT-DLNV 932
Query: 362 VMYVGTSQARNIIREYEFYF 381
V+Y G+ +R +I++YE YF
Sbjct: 933 VVYHGSMISRQMIQQYEMYF 952
Score = 73 (30.8 bits), Expect = 9.5e-122, Sum P(2) = 9.5e-122
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 173 QMSSNNNAEEDFVAIRPEWTT--VDRILACRGEDDEKEYLVKYKELSYDECYWEYESDI- 229
Q+ N +EED + ++ + + ++ + +E+ VKYK SY C W E +
Sbjct: 675 QLFVENPSEEDAAIVDKILSSRIIKKEISAGMTVETEEFFVKYKNYSYLHCEWATEQQLL 734
Query: 230 --SAFQPEIERF-IKIQSRSH 247
Q +I+RF ++ R+H
Sbjct: 735 KDKRIQQKIKRFKLRQAQRAH 755
Score = 50 (22.7 bits), Expect = 2.6e-119, Sum P(2) = 2.6e-119
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 130 VKQYLVKWKGLSYLHCTW 147
V YLVKW L Y TW
Sbjct: 790 VVYYLVKWCSLPYEDSTW 807
Score = 37 (18.1 bits), Expect = 6.0e-118, Sum P(2) = 6.0e-118
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 243 QSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEG 293
+ R S +KQ+ + + ++E+ K KE + + P +S + EG
Sbjct: 507 KQRKKADSESKQEKANRIISEAIAKAKERGE-RNIPRVMSPENFPSVSAEG 556
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 1165 (415.2 bits), Expect = 1.1e-121, Sum P(2) = 1.1e-121
Identities = 243/518 (46%), Positives = 336/518 (64%)
Query: 257 SPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMG 314
S + TE ++P ++++ E S E+ + L YQLEG+N+L F+W + ILADEMG
Sbjct: 930 SREPETERVERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMG 989
Query: 315 LGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNI 373
LGKTIQSI FL ++ + I P LV+APLST+ NWEREF TW ++NVV+Y G+ +R
Sbjct: 990 LGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRT 1048
Query: 374 IREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMI 433
I+ YE YF + KF ++T++EMI D L+ I W+C++
Sbjct: 1049 IQLYEMYFKDPQGRVI------------KGSYKFHAIITTFEMILTDCPELRNIPWRCVV 1096
Query: 434 VDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ 493
+DE HRLKN++ KL LK H+VLLTGTPLQN ++ELF L+HFL+ +F S F
Sbjct: 1097 IDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFM 1156
Query: 494 EEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT 553
+EF D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++ QK+YY+AIL
Sbjct: 1157 QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILE 1216
Query: 554 RNYQILTRRGG-AQI-SLINVVMELRKLCCHPYMLEGVEPDI-EDTNES---------FK 601
+N+ L++ GG A + +L+N +MELRK C HPY++ G E I E+ E+ +
Sbjct: 1217 KNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQ 1276
Query: 602 QLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGA 661
+++++GKL L+DK++ KLK GHRVLI+SQ LD+LEDYL +++ YERIDG+V G
Sbjct: 1277 AMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGN 1336
Query: 662 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH--ADLQAMARAH 719
RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP + QA AR H
Sbjct: 1337 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCH 1396
Query: 720 RLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
R+GQ+ V I+RLITR S E M K+ L+ V+
Sbjct: 1397 RIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVL 1434
Score = 441 (160.3 bits), Expect = 8.2e-36, Sum P(2) = 8.2e-36
Identities = 105/269 (39%), Positives = 152/269 (56%)
Query: 122 KLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAE 181
K +++ V+++ VK+K SYLHC W ++ K + R++ K+ F + N
Sbjct: 808 KESGEEVEVEEFYVKYKNFSYLHCQWASVEDLEK----DKRIQQKIKRFKAKQGQNKFLS 863
Query: 182 E-DFVAIRPEWTTVDRILA-CRGEDDEKE----YLVKYKELSYDECYWEYESDISAFQPE 235
E + P++ VDRI+ R DD E YLVK+ L Y++ WE DI Q +
Sbjct: 864 EIEDELFNPDYVEVDRIMDFARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDID--QAK 921
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSLHPYQLEG 293
IE F K+ SR P+ TE ++P ++++ E S E+ + L YQLEG
Sbjct: 922 IEEFEKLMSRE-----------PE--TERVERPPADDWKKSESSREYKNNNKLREYQLEG 968
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREF 352
+N+L F+W + ILADEMGLGKTIQSI FL ++ + I P LV+APLST+ NWEREF
Sbjct: 969 VNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREF 1028
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYF 381
TW ++NVV+Y G+ +R I+ YE YF
Sbjct: 1029 RTWT-ELNVVVYHGSQASRRTIQLYEMYF 1056
Score = 83 (34.3 bits), Expect = 1.1e-121, Sum P(2) = 1.1e-121
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 172 RQMSSNNNAEEDFVAIRPEWTTVDRILACR--------GEDDE-KEYLVKYKELSYDECY 222
R SN + E ++ E V++I++ R GE+ E +E+ VKYK SY C
Sbjct: 773 RDSPSNTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQ 832
Query: 223 WEYESDISA---FQPEIERF 239
W D+ Q +I+RF
Sbjct: 833 WASVEDLEKDKRIQQKIKRF 852
Score = 40 (19.1 bits), Expect = 3.9e-117, Sum P(2) = 3.9e-117
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 2 SSLVERLRVRSDRKPIYQL-DESDDDADFE-QGKPGTTVEKFERIVRIDAK 50
S V+R R D + +++ DE DDAD + P T + E+ +DA+
Sbjct: 744 SRQVKRKRYTEDLE--FKISDEEPDDADAAGRDSPSNTSQS-EQQESVDAE 791
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 1141 (406.7 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
Identities = 275/738 (37%), Positives = 419/738 (56%)
Query: 61 ENLM-SCDTCTYAYHAKCLVPPLKAPPSGSWRCPECVSPLNDIDKILDCEMRPTVAGDSD 119
+NL+ C C ++H L+A +W+C +C S +++ ++ RP
Sbjct: 376 DNLLFRCKACHRSFH----FDHLRAGRISNWQCHDCNSLPGEVNAMV--AWRPLSTASKK 429
Query: 120 VSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEK---EFLKAFKSNPRLRTKVNNFHRQMSS 176
K+ K+YL+KWK SY HCTW+P ++ LR+ ++ R M++
Sbjct: 430 SPKISELD---KEYLIKWKEKSYAHCTWMPGSWVWGYINPVMRRAFLRSDKSHLPR-MTT 485
Query: 177 NNNAEEDFVA--IRPEWTTVDRILACRGED-DE---------KEYLVKYKELSYDECYWE 224
+ D++ I + D L GED DE K Y VK+K L Y++ WE
Sbjct: 486 DEAIPNDYLRFDIIFDVKFADNDLHMYGEDYDEDLERIDNVSKAY-VKFKGLPYEDAVWE 544
Query: 225 YESDIS---AFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFL 281
D S A+ + + S+ N+ S Q + +K K F+ E P +
Sbjct: 545 VPPDRSNTEAWNDFKAAYADWAKKPFISTPNQ--ISLQKHLANVRKQK-FKSREAQPRIM 601
Query: 282 SGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE-RISPHLVVA 340
+GG + YQ +GLN+L F W KQ + ILADEMGLGKTIQ I LA+L + + P L+V
Sbjct: 602 TGGEIMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLVQDHKCWPFLIVV 661
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
P ST NW +E TW P + V Y G+S AR + +E+E +
Sbjct: 662 PNSTCPNWRKELKTWVPSLRAVTYYGSSLARKMAQEHEMFI-----------------RG 704
Query: 401 XQDRIKFDVLLTSYEMINLDSAS--LKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
D ++ V++TSYE + DS L I W +IVDEG RLK+ S+++ L +
Sbjct: 705 DPD-LRCHVVITSYETMVDDSCRKVLSRIPWAGLIVDEGQRLKSDKSQIYEGLSKMKFPF 763
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
+VL+TGTPLQNN ELF L+ F D K + EE +E++ +++E I LH ++ P LR
Sbjct: 764 KVLMTGTPLQNNTKELFNLLQFCDQSK--NAEELEEKYGTLSKEN-IPELHELIRPFFLR 820
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-----------RGGAQI 567
R K V+ LPP ++I+ V +S QK+ YK+IL +N Q++ + +
Sbjct: 821 RTKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQLIKAIFQRNEEDQPLKQTERH 880
Query: 568 SLINVVMELRKLCCHPYML-EGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHR 626
+L N++M+LRK CHP++ + +E +D + + L++++GKLQLL+ M+ KL+ +GHR
Sbjct: 881 NLNNILMQLRKCLCHPFIFSKAIEERTDDPEVAHRNLVDAAGKLQLLELMLPKLQARGHR 940
Query: 627 VLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRA 686
VL++SQF LD++ED+L + R+DG++ E+Q ID +NA+NS F FLLSTR+
Sbjct: 941 VLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTRS 1000
Query: 687 GGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMT 746
GG+GINLATADTVII D D+NPH D+QA++RAHR+GQ NKV++F+L+ RGS EE++MQ+
Sbjct: 1001 GGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMIRGSAEEKIMQIG 1060
Query: 747 KKKMVLEHLVVGRLKAQN 764
+KKMVL+H+++ R+ A++
Sbjct: 1061 RKKMVLDHVLIDRMAAED 1078
Score = 69 (29.3 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
Identities = 26/90 (28%), Positives = 41/90 (45%)
Query: 2 SSLVERLRVRSDRKPIYQLDESDDDADFEQGKPGT-TVEKFERIVRIDA----KDDSCQA 56
+S R +R + +Y+ D S+ +A + T EKF++I D + C+
Sbjct: 200 ASTRSRKPLRYNLHEMYEDDISEYEAVLSNHRKYVGTKEKFDKIPSSDLFRGRHREVCEV 259
Query: 57 C---GESEN---LMSCDTCTYAYHAKCLVP 80
C G+ + L+ C CT AYH CL P
Sbjct: 260 CSIEGDLPDKGPLVFCQGCTDAYHQACLGP 289
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
Identities = 243/526 (46%), Positives = 337/526 (64%)
Query: 254 QKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
Q P+ + + +++ E S E+ + L YQLEG+N+L F+W + + ILADEM
Sbjct: 5 QSRHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEM 64
Query: 314 GLGKTIQSIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARN 372
GLGKTIQSIAFL ++ I P LV+APLST+ NWEREF TW +MN ++Y G+ +R
Sbjct: 65 GLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQ 123
Query: 373 IIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCM 432
+I++YE Y KFD L+T++EMI D L+ I+W+C+
Sbjct: 124 MIQQYEMYCKDSRGRLIPGAY------------KFDALITTFEMILSDCPELREIEWRCV 171
Query: 433 IVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF 492
I+DE HRLKN++ KL SLK H+VLLTGTPLQN ++ELF L+HFL+ +F S EF
Sbjct: 172 IIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEF 231
Query: 493 QEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 552
++F D+ EEQ+ +L +L P +LRR+K+DV K L PK+E I+ VEL++ QK+YY+AIL
Sbjct: 232 LKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAIL 291
Query: 553 TRNYQILTRRGGA--QISLINVVMELRKLCCHPYMLEGVEPDI-EDTNES---------F 600
+N+ L++ G +L+N +MELRK C HPY++ G E I + E+
Sbjct: 292 EKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHL 351
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ ++ S+GKL L+DK++ KLK GH+VLI+SQ LD+LEDYL +++ YERIDG+V G
Sbjct: 352 QAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRG 411
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
RQ IDRF+ +S RF FLL TRAGGLGINL ADT II+DSDWNP DLQA AR HR
Sbjct: 412 NLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHR 471
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
+GQ+ V ++RLITR S E M K+ L+ V+ + ++ N
Sbjct: 472 IGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN 517
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 1144 (407.8 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 264/681 (38%), Positives = 400/681 (58%)
Query: 102 IDKILDCEMRPTV-AGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSN 160
ID +L+ +P V D D+ + Q ++ +KW+ S+ H TW + +N
Sbjct: 262 IDIVLNHRPKPGVDPSDPDIDR---HQF---EFYIKWQEKSHYHATWETTESL-----AN 310
Query: 161 PRLRTKVNNFHRQMSSNN---NAEEDFVAI-RPEWTTVDRILACRGEDDEK--EYLVKYK 214
R +++N+ R++ + + N +E R +W +DR +D K E ++ +
Sbjct: 311 CRSTRRLDNYVRKVLAEDLRLNYDEGVPPEDREKWN-LDRERDVDAIEDHKIVERVIAMR 369
Query: 215 ELSYDECY---WE-YESDISAFQPEIERFIKIQSRSHRSSCNKQKSSP-QDVTES-TKKP 268
E Y W+ D ++ E E I R ++ P D ES
Sbjct: 370 EGEDGTEYLVKWKRLFYDSCTWESE-ELISNIAQREIDRFLDRSSRPPVSDKKESHPSSR 428
Query: 269 KEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL 328
K F+ + +P FL G L +Q++G+NF+ F+W K +V+LADEMGLGKT+Q++AF++ L
Sbjct: 429 KPFEPIKGTPSFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWL 488
Query: 329 FGERIS--PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXX 386
R P +VV PLST+ +W F W+P +N V+Y G +RN+++EYE
Sbjct: 489 RHVRRQQGPFVVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPR 548
Query: 387 XXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSK 446
R KF+VLLT+YE + +DS+ L WQ M VDE HRLKN+DS+
Sbjct: 549 -----------------RPKFNVLLTTYEYVLVDSSFLSQFNWQFMAVDEAHRLKNRDSQ 591
Query: 447 LFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQE---E 503
L+ L+++++ R+L+TGTP+QNNL EL L+ FL+ G L + D+N E E
Sbjct: 592 LYIKLQEFNSPARLLITGTPIQNNLAELSALLDFLNPG----LVNVDADM-DLNSEAASE 646
Query: 504 QISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-R 562
+++ L + ++P +LRR K V +LPPK E I+RVELS Q EYYK ILT+NY L
Sbjct: 647 KLAELTKAISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGT 706
Query: 563 GGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTN----ESFKQLLESSGKLQLLDKMMV 618
G + SL+N++MEL+K HP+M E I + + + + L+ SSGK+ LLD+++
Sbjct: 707 KGQKQSLLNIMMELKKASNHPFMFPSAETKILEGSTRREDVLRALITSSGKMMLLDQLLA 766
Query: 619 KLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRF 678
KLK GHRVLI+SQ MLD+L DY+ ++ + Y+R+DG + A R++ I+ +NA +SS F
Sbjct: 767 KLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDF 826
Query: 679 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSI 738
F+LSTRAGGLGINL TADTVI++DSDWNP ADLQAMARAHR+GQT V ++RL+++ ++
Sbjct: 827 AFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTV 886
Query: 739 EERMMQMTKKKMVLEHLVVGR 759
EE +++ + K++LE + + R
Sbjct: 887 EEEVIERARNKLLLEFITIQR 907
Score = 37 (18.1 bits), Expect = 7.6e-118, Sum P(2) = 7.6e-118
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 7 RLRVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRID 48
R R+ K + +E DDD+ FE T + V D
Sbjct: 218 RFSTRNAAK-VSNYNEDDDDSMFEDDADDLTPNYWVNTVEDD 258
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 1164 (414.8 bits), Expect = 7.0e-117, Sum P(2) = 7.0e-117
Identities = 269/659 (40%), Positives = 390/659 (59%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEFLKAFKSNP---RLRTKVNNFHRQMSSNNNAEEDFVAIR 188
++L +K SY WV EK K K +P +L V N N + F
Sbjct: 744 RFLALFKNKSYRSVRWVTEKVIEKE-KESPTLIKLLKTVRNTPPPAIKNESEANPFNYFS 802
Query: 189 PEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWE-YESDISAFQPEIERFIKIQSRSH 247
P+ T +++ILA + + K K K ++ C W+ + S ++ E I + ++
Sbjct: 803 PDCTVIEKILA---KKETKAGKSK-KMTTFYLCKWKTLPHEKSTWEDE-NILITEEDQAA 857
Query: 248 RSSCNKQK---SSPQD-VTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSK 303
N + P+ V TK P F E P+F SL +Q+EG +L + W
Sbjct: 858 IKQFNANQLLLDQPKKYVNRPTKLPI-FNN-ELVPKFQDNLSLKEFQVEGFLWLSYCWYH 915
Query: 304 QTHVILADEMGLGKTIQSIAFLASLFGERIS---PHLVVAPLSTLRNWEREFATWAPQMN 360
+LADEMGLGKTIQSIAFL L + + P LVVAPLSTL NW +E W
Sbjct: 916 CRSSLLADEMGLGKTIQSIAFLQYL-SQSVGIKGPFLVVAPLSTLGNWHKEILKWTKMKT 974
Query: 361 VVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLD 420
+V Y G+ + R I +YEF +D F+VLLT+YE I D
Sbjct: 975 LVFY-GSQETRGFISKYEF--------------------KHKDTYLFEVLLTTYETIMSD 1013
Query: 421 SASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHF 480
+S + W+ +I+DEGHR+KN SK+ S LK T H ++LTGTPLQN++ EL+ +++F
Sbjct: 1014 HSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTMLNF 1073
Query: 481 LDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVEL 540
LD KF S +EF +E+ D+ +E Q+S+LH++L+P+LLRR+K+DV +P K+E +++VEL
Sbjct: 1074 LDPDKFNSCQEFLDEYSDLKEESQVSKLHQLLSPYLLRRMKEDVELSIPIKEETVIQVEL 1133
Query: 541 SSKQKEYYKAILTRNYQILTRRGGAQIS----LINVVMELRKLCCHPYMLEGVEPDIEDT 596
SS QK YY+AIL RN + L+R G Q + L N+++++RK+C HP+++ G E I
Sbjct: 1134 SSTQKTYYRAILERNREFLSR-GIKQKTNLPKLSNIMIQIRKVCNHPFLIPGAEESIVKQ 1192
Query: 597 -----NESFKQLL-ESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
+E +LL +SS KL L+DK++ +LK +GH+VLI+SQ L++LEDYL ++++
Sbjct: 1193 EKIAGDEELGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYT 1252
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
YER+DG + RQ IDRF K ++RF FLLSTRAGG+GINL TADTVI++DSDWNP +
Sbjct: 1253 YERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQS 1312
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQVT 769
DLQA AR HR+GQTN V ++RLITR + EE + + KK++L+H+V+ K + T
Sbjct: 1313 DLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLLDHIVLSTNKDKKQTNTT 1371
Score = 39 (18.8 bits), Expect = 7.0e-117, Sum P(2) = 7.0e-117
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 168 NNFHRQMSSNNNAEED 183
NN + ++NNN EE+
Sbjct: 140 NNNNNNNNNNNNEEEE 155
Score = 38 (18.4 bits), Expect = 9.0e-117, Sum P(2) = 9.0e-117
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 168 NNFHRQMSSNNNAEED 183
NN + ++NNN EE+
Sbjct: 139 NNNNNNNNNNNNNEEE 154
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 1127 (401.8 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 266/666 (39%), Positives = 395/666 (59%)
Query: 114 VAGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQ 173
V GD + SK++ QYL+KWKG S++H TW E E LK + N + K++N+ ++
Sbjct: 295 VDGDPNAGFEKSKELGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVKGMKKLDNYKKK 351
Query: 174 MSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWE 224
++ E+ + L +D K+Y + + ++ Y + Y +
Sbjct: 352 DQETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCK 408
Query: 225 YES-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPE 279
++ S E I K Q+R S N+ K++P +D ++P+ F + P
Sbjct: 409 WQGLPYSECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPS 467
Query: 280 FLSGGS---LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPH 336
++ G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H
Sbjct: 468 YIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----H 523
Query: 337 LVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXX 396
+ P + +W Q + + Q ++ Y
Sbjct: 524 QLYGPFLLVVPLST-LTSW--QREIQTWA--PQMNAVV-----YLGDITSRNMIRTHEWM 573
Query: 397 XXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYST 456
R+KF++LLT+YE++ D + L + W + VDE HRLKN DS L+ +L + +
Sbjct: 574 HPQTK--RLKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKS 631
Query: 457 RHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHL 516
HR+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P L
Sbjct: 632 NHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFL 690
Query: 517 LRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVME 575
LRRVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++ME
Sbjct: 691 LRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMME 750
Query: 576 LRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQ 634
L+K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ
Sbjct: 751 LKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMV 810
Query: 635 HMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLA 694
MLD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA
Sbjct: 811 RMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLA 870
Query: 695 TADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEH 754
+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+H
Sbjct: 871 SADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDH 930
Query: 755 LVVGRL 760
LV+ R+
Sbjct: 931 LVIQRM 936
Score = 47 (21.6 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 21 DESDDDADFEQ--GKPGTTVE---KFERIVRIDAKDDSCQACGE 59
+E DDD D+++ + TV K + D+ DD + CGE
Sbjct: 215 EEEDDDEDYDKRGSRRQATVNVSYKEAEETKTDS-DDLLEVCGE 257
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 271/673 (40%), Positives = 389/673 (57%)
Query: 115 AGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEF-------LKAFKSNPRLRTKV 167
+GD D K S+ QYL+KWKG SY+H TW E+ LK ++ + ++
Sbjct: 293 SGDFDTEKDESEV----QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEI 348
Query: 168 NNFHRQMSSNN----NAEEDFVA-IRPEWTTVDRILACR------GEDDEKEYLVKYKEL 216
+ ++S + N +++ + + ++ V+R++A + G+ D + K
Sbjct: 349 KQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPS 408
Query: 217 SYDE--CYWEYESDISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEF 271
+ E C W S E E I K QS S N K+ P ++ K+ F
Sbjct: 409 NEPEYLCKW-MGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRF 467
Query: 272 QQYEHSPEFLSGGSLH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF 329
+ P +L G +L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF
Sbjct: 468 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 527
Query: 330 GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXX 389
+ H + P + +W + + + N++ Y
Sbjct: 528 HQ----HQLYGPFLIVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNT 573
Query: 390 XXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFS 449
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+
Sbjct: 574 IREYEWIHSQTK--RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYK 631
Query: 450 SLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLH 509
+L + + HR+L+TGTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH
Sbjct: 632 TLIDFKSHHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLH 690
Query: 510 RMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQIS 568
++L P LLRRVKKDV K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+
Sbjct: 691 KVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG 750
Query: 569 LINVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRV 627
+N+VMEL+K C H Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RV
Sbjct: 751 FLNIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRV 810
Query: 628 LIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAG 687
LI+SQ MLD+L +YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAG
Sbjct: 811 LIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAG 870
Query: 688 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTK 747
GLGINLA+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ K
Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAK 930
Query: 748 KKMVLEHLVVGRL 760
KKMVL+HLV+ R+
Sbjct: 931 KKMVLDHLVIQRM 943
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 1121 (399.7 bits), Expect = 3.5e-115, Sum P(2) = 3.5e-115
Identities = 267/664 (40%), Positives = 394/664 (59%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 301 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 357
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWEYE 226
++ E+ + L +D K+Y + + ++ Y + Y +++
Sbjct: 358 ETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQ 414
Query: 227 S-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFL 281
S E I K Q+ S N+ K++P +D ++P+ F + P ++
Sbjct: 415 GLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPSYI 473
Query: 282 SG--G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLV 338
G G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H +
Sbjct: 474 GGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----HQL 529
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
P + +W Q + + SQ ++ Y
Sbjct: 530 YGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDINSRNMIRTHEWTHH 579
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + H
Sbjct: 580 QTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNH 637
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
R+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLR
Sbjct: 638 RLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLR 696
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELR 577
RVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+
Sbjct: 697 RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK 756
Query: 578 KLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ M
Sbjct: 757 KCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 816
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+A
Sbjct: 817 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 876
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+HLV
Sbjct: 877 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 936
Query: 757 VGRL 760
+ R+
Sbjct: 937 IQRM 940
Score = 49 (22.3 bits), Expect = 3.5e-115, Sum P(2) = 3.5e-115
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 14 RKPIYQLDESDDDADFEQGKPGT----TVE---KFERIVRIDAKDDSCQACGE 59
++ I +E DD+ D++ K + TV K + ++ D+ DD + CGE
Sbjct: 210 KRQIDSSEEDDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDS-DDLLEVCGE 261
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 1118 (398.6 bits), Expect = 7.7e-115, Sum P(2) = 7.7e-115
Identities = 266/664 (40%), Positives = 393/664 (59%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 300 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 356
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWEYE 226
++ E+ + L +D K+Y + + ++ Y + Y +++
Sbjct: 357 ETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQ 413
Query: 227 S-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFL 281
S E I K Q+ S N+ K++P +D ++P+ F + P ++
Sbjct: 414 GLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPSYI 472
Query: 282 SGGS---LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLV 338
G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H +
Sbjct: 473 GGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----HQL 528
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
P + +W Q + + SQ ++ Y
Sbjct: 529 YGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDINSRNMIRTHEWMHP 578
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + H
Sbjct: 579 QTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNH 636
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
R+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLR
Sbjct: 637 RLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLR 695
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELR 577
RVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+
Sbjct: 696 RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK 755
Query: 578 KLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ M
Sbjct: 756 KCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 815
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+A
Sbjct: 816 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 875
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+HLV
Sbjct: 876 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 935
Query: 757 VGRL 760
+ R+
Sbjct: 936 IQRM 939
Score = 49 (22.3 bits), Expect = 7.7e-115, Sum P(2) = 7.7e-115
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 14 RKPIYQLDESDDDADFEQGKPGT----TVE---KFERIVRIDAKDDSCQACGE 59
++ I +E DD+ D++ K + TV K + ++ D+ DD + CGE
Sbjct: 209 KRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDS-DDLLEVCGE 260
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 226/503 (44%), Positives = 330/503 (65%)
Query: 264 STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIA 323
+T+ P +++ E P ++ GG + +QL G+N++ + W + + ILADEMGLGKT+Q++
Sbjct: 370 NTRPP--YRKLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVC 427
Query: 324 FLASLFG--ERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYF 381
FL+ L ++ P L+V PLST+ W+ A W P +N + Y G +++R IREYEFY
Sbjct: 428 FLSYLVHSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYL 487
Query: 382 PXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLK 441
++KF++LLT+YE I D L I+WQ + +DE HRLK
Sbjct: 488 STNSR-----------------KLKFNILLTTYEYILKDKQELNNIRWQYLAIDEAHRLK 530
Query: 442 NKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQ 501
N +S L+ +L Q+ T +R+L+TGTPLQNNL EL L++FL GKF +E + + Q
Sbjct: 531 NSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQPNAEQ 590
Query: 502 EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR 561
E I L L P +LRR+KKDV K LP K E ILRVELS Q E+YK ILT+NY+ LT
Sbjct: 591 ERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTG 650
Query: 562 R--GGAQISLINVVMELRKLCCHPYMLEGVEPDI----EDTNE-SFKQLLESSGKLQLLD 614
G Q+SL+N+V+EL+K+ HPY+ G + T E + + ++ +SGK+ LLD
Sbjct: 651 HTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLD 710
Query: 615 KMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKN 674
K++ +LK GHRVLI+SQ ML++L +Y++ + + Y+R+DG + + R++ ID FNA +
Sbjct: 711 KLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPD 770
Query: 675 SSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLIT 734
S F FLLSTRAGGLGINL TADTVII+DSDWNP ADLQAMARAHR+GQ N V ++R ++
Sbjct: 771 SPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLS 830
Query: 735 RGSIEERMMQMTKKKMVLEHLVV 757
+ ++EE +++ ++KM+LE+ ++
Sbjct: 831 KDTVEEDILERARRKMILEYAII 853
Score = 367 (134.2 bits), Expect = 7.5e-30, P = 7.5e-30
Identities = 85/267 (31%), Positives = 144/267 (53%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNN---FHRQMSSNNNAE-EDFVAI 187
QYL+KW+ +S+LH TW + L + + ++ + + R++ + ED A+
Sbjct: 231 QYLIKWQEVSHLHNTW-EDYSTLSSVRGYKKVDNYIKQNIIYDREIREDPTTTFEDIEAL 289
Query: 188 R----------PEWTTVDRILACR-GEDDEKEYLVKYKELSYDECYWEYESDISAFQP-E 235
E+ V+RI+A E+ + EY VK+++L YD C WE I + P E
Sbjct: 290 DIERERKNMLFEEYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWEDADVIYSMAPNE 349
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLN 295
+ +F++ + N + V +T+ P +++ E P ++ GG + +QL G+N
Sbjct: 350 VYQFLQRE--------NSPYLPYKGVFYNTRPP--YRKLEKQPSYIKGGEIRDFQLTGIN 399
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG--ERISPHLVVAPLSTLRNWEREFA 353
++ + W + + ILADEMGLGKT+Q++ FL+ L ++ P L+V PLST+ W+ A
Sbjct: 400 WMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLA 459
Query: 354 TWAPQMNVVMYVGTSQARNIIREYEFY 380
W P +N + Y G +++R IREYEFY
Sbjct: 460 NWTPDLNSICYTGNTESRANIREYEFY 486
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 1140 (406.4 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 266/656 (40%), Positives = 381/656 (58%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEF-------LKAFKSNPRLRTKVNNFHRQMSSNN----NA 180
QYL+KWKG SY+H TW E+ LK ++ + ++ + ++S + N
Sbjct: 313 QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 372
Query: 181 EEDFVA-IRPEWTTVDRILACR------GEDDEKEYLVKYKELSYDE--CYWEYESDISA 231
+++ + + ++ V+R++A + G+ D + K + E C W S
Sbjct: 373 QQELASELNKQYQIVERVIAVKTSKSALGQTDFPAHSRKPAPSNEPEYLCKW-MGLPYSE 431
Query: 232 FQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLH- 287
E E I K QS S N K+ P ++ K+ F + P +L G +L
Sbjct: 432 CSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGENLEL 491
Query: 288 -PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLR 346
YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF + H + P +
Sbjct: 492 RDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFLIVV 547
Query: 347 NWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIK 406
+W + + + N++ Y R+K
Sbjct: 548 PLST-LTSWQREFEI-----WAPEVNVV----VYIGDLMSRNTIREYEWIHSQTK--RLK 595
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F+ L+T+YE++ D L I W + VDE HRLKN DS L+ +L + + HR+L+TGTP
Sbjct: 596 FNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP 655
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMK 526
LQN+L EL+ L+HF+ KF E+F+E+ +E LH++L P LLRRVKKDV K
Sbjct: 656 LQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEK 714
Query: 527 ELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCHPYM 585
LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+ +N+VMEL+K C H Y+
Sbjct: 715 SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYL 774
Query: 586 LEGVEPDIEDTNESFKQ-LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYL 644
+ E +T + Q L+ SSGKL LLDK++ +L+E+G+RVLI+SQ MLD+L +YL
Sbjct: 775 IRAPEDSERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL 834
Query: 645 TFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDS 704
T K + ++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINLA+ADTV+I+DS
Sbjct: 835 TIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS 894
Query: 705 DWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
DWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 895 DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 950
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 1104 (393.7 bits), Expect = 1.1e-114, Sum P(3) = 1.1e-114
Identities = 254/652 (38%), Positives = 383/652 (58%)
Query: 132 QYLVKWKGLSYLHCTWVP----EKEFLKAFKSNPRLRTK---VNNFHRQMSSNN----NA 180
Q+L+KWKG SY+H TW ++ +K K + K +N + ++ S + N
Sbjct: 315 QFLIKWKGWSYIHNTWESVDSLTQQKVKGMKKLENFKKKNEELNAWLKKASPEDLEYYNC 374
Query: 181 EEDFVA-IRPEWTTVDRILACR-GEDDEKEYLVKYKELSYDE---CYWEYESDISAFQPE 235
+++ + ++ ++R++A R G+ +K S + C W + E
Sbjct: 375 QQELTNDLSKQFQIIERVIATRTGKSQATSDTPSHKSSSGEPEYLCKW-MGLPYAECTWE 433
Query: 236 IERFIKIQSRSHRSSCNKQKSS---PQDVTESTKKPKEFQQYEHSPEFLSGGSLH--PYQ 290
IK + ++ S + + SS P + K+ F + P ++ +L YQ
Sbjct: 434 DSALIKKKFQACIDSFHNRNSSKTVPSKDCKVLKQRPRFVPLKKQPSYIGDENLELRDYQ 493
Query: 291 LEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWER 350
L+G+N+L SW + VILADEMGLGKTIQ+I+FL+ LF + H + P +
Sbjct: 494 LDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFIVVVPLST 549
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
+W + + + N++ Y RIKF+ L
Sbjct: 550 -LTSWQREFDT-----WAPDMNVV----VYLGDVTSRKTIRDYEWINPQTK--RIKFNAL 597
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LT+YE++ D L I W + VDE HRLKN DS L+ +L + + HR+L+TGTPLQN+
Sbjct: 598 LTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNS 657
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L EL+ L+HFL + KF S E+F++E ++ LH++L P LLRRVKKDV K LP
Sbjct: 658 LKELWSLLHFLMSDKFESWEDFEDEHGK-GRDNGYQSLHKVLEPFLLRRVKKDVEKSLPA 716
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCHPYMLEGV 589
K E ILRV++S++QK++YK ILTRN++ L++ G+ +N+VMEL+K C H ++++
Sbjct: 717 KVEQILRVDMSAQQKQFYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHAFLIKQP 776
Query: 590 EPDIEDT-NESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKK 648
E D E + L+ GKL LLDK++ +LK++G+RVLI+SQ MLD+L DYL+ K+
Sbjct: 777 EDGENDAPQEHLQSLVRGGGKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKR 836
Query: 649 WQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNP 708
+Q++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+ADTV+I+DSDWNP
Sbjct: 837 YQFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNP 896
Query: 709 HADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 897 QNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRM 948
Score = 46 (21.3 bits), Expect = 1.1e-114, Sum P(3) = 1.1e-114
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 11 RSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLM 64
R RK ++ DDD D E+ P + ++ K+D +S++L+
Sbjct: 203 RKQRKQESSDEDDDDDDDDEEDTPKRQTRR-RAATKVSYKEDQNDFETDSDDLI 255
Score = 43 (20.2 bits), Expect = 1.1e-114, Sum P(3) = 1.1e-114
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 702 YDSDWNPHADLQAMARAHRLGQTN 725
+D DW+ H D Q + + G N
Sbjct: 1260 FDVDWDIHDDTQLLLGIYEHGYGN 1283
Score = 42 (19.8 bits), Expect = 2.9e-114, Sum P(3) = 2.9e-114
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 21 DESDDDADFEQGKPGTTVEKFERIVR 46
D+S+D+ D E+ + E+ E+ VR
Sbjct: 155 DDSNDEEDVEEETSSSESEQEEKKVR 180
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 1139 (406.0 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 271/673 (40%), Positives = 389/673 (57%)
Query: 115 AGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEF-------LKAFKSNPRLRTKV 167
+GD D K S+ QYL+KWKG SY+H TW E+ LK ++ + ++
Sbjct: 306 SGDFDTEKDESEV----QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEI 361
Query: 168 NNFHRQMSSNN----NAEEDFVA-IRPEWTTVDRILACR------GEDDEKEYLVKYKEL 216
+ ++S + N +++ + + ++ V+R++A + G+ D + K
Sbjct: 362 KQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPS 421
Query: 217 SYDE--CYWEYESDISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEF 271
+ E C W S E E I K QS S N K+ P ++ K+ F
Sbjct: 422 NEPEYLCKW-MGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRF 480
Query: 272 QQYEHSPEFLSGGSLH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF 329
+ P +L G +L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF
Sbjct: 481 VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF 540
Query: 330 GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXX 389
+ H + P + +W + + + N++ Y
Sbjct: 541 HQ----HQLYGPFLIVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNT 586
Query: 390 XXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFS 449
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+
Sbjct: 587 IREYEWIHSQTK--RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYK 644
Query: 450 SLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLH 509
+L + + HR+L+TGTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH
Sbjct: 645 TLIDFKSHHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLH 703
Query: 510 RMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQIS 568
++L P LLRRVKKDV K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+
Sbjct: 704 KVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG 763
Query: 569 LINVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRV 627
+N+VMEL+K C H Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RV
Sbjct: 764 FLNIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRV 823
Query: 628 LIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAG 687
LI+SQ MLD+L +YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAG
Sbjct: 824 LIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAG 883
Query: 688 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTK 747
GLGINLA+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ K
Sbjct: 884 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAK 943
Query: 748 KKMVLEHLVVGRL 760
KKMVL+HLV+ R+
Sbjct: 944 KKMVLDHLVIQRM 956
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 268/659 (40%), Positives = 381/659 (57%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTKVNNFHR---QMSSNN----NA 180
QYL+KWKG SY+H TW E+ +K K + K + + ++S + N
Sbjct: 305 QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 364
Query: 181 EEDFVA-IRPEWTTVDRILACR------GEDD-EKEYLVKYKELSYDE----CYWEYESD 228
+++ + + ++ V+R++A + G+ D E K +E C W
Sbjct: 365 QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPGEIAHSRKPAPSNEPEYLCKW-MGLP 423
Query: 229 ISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS 285
S E E I K QS S N K+ P ++ K+ F + P +L G +
Sbjct: 424 YSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGEN 483
Query: 286 LH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF + H + P
Sbjct: 484 LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFL 539
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ +W + + + N++ Y
Sbjct: 540 IVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNTIREYEWIHSQTK-- 587
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+ +L + + HR+L+T
Sbjct: 588 RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 647
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKD 523
GTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH++L P LLRRVKKD
Sbjct: 648 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKD 706
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCH 582
V K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+ +N+VMEL+K C H
Sbjct: 707 VEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 766
Query: 583 PYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RVLI+SQ MLD+L
Sbjct: 767 CYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILA 826
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
+YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 827 EYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 886
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 887 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 945
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 1118 (398.6 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 266/664 (40%), Positives = 393/664 (59%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 283 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 339
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWEYE 226
++ E+ + L +D K+Y + + ++ Y + Y +++
Sbjct: 340 ETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQ 396
Query: 227 S-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFL 281
S E I K Q+ S N+ K++P +D ++P+ F + P ++
Sbjct: 397 GLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPSYI 455
Query: 282 SGGS---LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLV 338
G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H +
Sbjct: 456 GGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----HQL 511
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
P + +W Q + + SQ ++ Y
Sbjct: 512 YGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDINSRNMIRTHEWMHP 561
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + H
Sbjct: 562 QTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNH 619
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
R+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLR
Sbjct: 620 RLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLR 678
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELR 577
RVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+
Sbjct: 679 RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK 738
Query: 578 KLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ M
Sbjct: 739 KCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 798
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+A
Sbjct: 799 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 858
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE +++ KKKMVL+HLV
Sbjct: 859 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 918
Query: 757 VGRL 760
+ R+
Sbjct: 919 IQRM 922
Score = 49 (22.3 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 14 RKPIYQLDESDDDADFEQGKPGT----TVE---KFERIVRIDAKDDSCQACGE 59
++ I +E DD+ D++ K + TV K + ++ D+ DD + CGE
Sbjct: 192 KRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDS-DDLLEVCGE 243
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 1120 (399.3 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 258/654 (39%), Positives = 381/654 (58%)
Query: 133 YLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTK---VNNFHRQMSSNN----NAE 181
YL+KWKG SY+H TW E+ +K K + K + + ++S + N +
Sbjct: 310 YLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLAKVSPEDVEYFNCQ 369
Query: 182 EDFVA-IRPEWTTVDRILACRGEDD---EKEYLVKYKELSYDE----CYWEYESDISAFQ 233
++ + + ++ V+R++A + ++ ++ S ++ C W +
Sbjct: 370 QELASELNKQYQIVERVIAVKTSKSAAGHADFPANSRKTSSNDPEYLCKW-MGLPYAECS 428
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE---FQQYEHSPEFLSGGSLH--P 288
E E I + + S N + +S T K K+ F + P ++ +L
Sbjct: 429 WEDEALISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGSENLELRD 488
Query: 289 YQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNW 348
YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF + H + P +
Sbjct: 489 YQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFLVVVPL 544
Query: 349 EREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFD 408
+W + V + N++ Y R+KF+
Sbjct: 545 ST-LTSWQREFEV-----WAPEINVV----VYI--GDLMSRNMIREYEWIHSQSKRLKFN 592
Query: 409 VLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQ 468
L+T+YE++ D A L I W + VDE HRLKN DS L+ +L + + HR+L+TGTPLQ
Sbjct: 593 ALITTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQ 652
Query: 469 NNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKEL 528
N+L EL+ L+HF+ KF E+F+E+ +E LH++L P LLRRVKKDV K L
Sbjct: 653 NSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSL 711
Query: 529 PPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCHPYMLE 587
P K E ILRVE+S+ QK+YYK ILTRNY+ L++ G+ +N+VMEL+K C H Y+++
Sbjct: 712 PAKVEQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIK 771
Query: 588 GVEPDIEDTN-ESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
E + + E+ + L+ SSGKL LLDK++ +L+++G+RVLI+SQ MLD+L +YLT
Sbjct: 772 PPEENERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTI 831
Query: 647 KKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDW 706
K + ++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINLA+ADTV+I+DSDW
Sbjct: 832 KHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDW 891
Query: 707 NPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
NP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 892 NPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 945
Score = 44 (20.5 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 14 RKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDAK 50
RK ++ + S ++ D + G GT+ E RI AK
Sbjct: 142 RKKKWKREISGEEEDEDGGDQGTSAESEPEPKRIKAK 178
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 1133 (403.9 bits), Expect = 2.9e-114, P = 2.9e-114
Identities = 275/667 (41%), Positives = 387/667 (58%)
Query: 115 AGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQM 174
+GD D K S+ QYL+KWKG SY+H TW E E L+ K L+ K+ NF ++
Sbjct: 277 SGDFDTEKDESEV----QYLIKWKGWSYIHSTWESE-ESLQQQKVKG-LK-KLENFKKK- 328
Query: 175 SSNNNAEEDFVAIRPEWTTVDRILACRGE---DDEKEYLVKYKELSYDE----------- 220
+ ++ + PE V+ C+ E + K+Y + +E+++
Sbjct: 329 --EDEIKQWLGKVSPE--DVE-YFNCQQELASELNKQYQIVEREIAHSRKPAPSNEPEYL 383
Query: 221 CYWEYESDISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEFQQYEHS 277
C W S E E I K QS S N K+ P ++ K+ F +
Sbjct: 384 CKW-MGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQ 442
Query: 278 PEFLSGGSLH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISP 335
P +L G +L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF +
Sbjct: 443 PTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQ---- 498
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
H + P + +W + + + N++ Y
Sbjct: 499 HQLYGPFLIVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNTIREYEW 548
Query: 396 XXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYS 455
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+ +L +
Sbjct: 549 IHSQTK--RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFK 606
Query: 456 TRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPH 515
+ HR+L+TGTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH++L P
Sbjct: 607 SHHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPF 665
Query: 516 LLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVM 574
LLRRVKKDV K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+ +N+VM
Sbjct: 666 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVM 725
Query: 575 ELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQF 633
EL+K C H Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RVLI+SQ
Sbjct: 726 ELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQM 785
Query: 634 QHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 693
MLD+L +YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINL
Sbjct: 786 VRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINL 845
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
A+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+
Sbjct: 846 ASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLD 905
Query: 754 HLVVGRL 760
HLV+ R+
Sbjct: 906 HLVIQRM 912
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 1135 (404.6 bits), Expect = 3.4e-114, P = 3.4e-114
Identities = 270/673 (40%), Positives = 389/673 (57%)
Query: 115 AGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEF-------LKAFKSNPRLRTKV 167
+GD D K +I QYL+KWKG SY+H TW E+ LK ++ + ++
Sbjct: 293 SGDFDTEK-DEGEI---QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEI 348
Query: 168 NNFHRQMSSNN----NAEEDFVA-IRPEWTTVDRILACR------GEDDEKEYLVKYKEL 216
+ ++S + N +++ + + ++ V+R++A + G+ D + K
Sbjct: 349 KQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPS 408
Query: 217 SYDE--CYWEYESDISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEF 271
+ E C W S E E I K Q+ S N K+ P ++ K+ F
Sbjct: 409 NEPEYLCKW-MGLPYSECSWEDEALIGKKFQNCIDSFHSRNNSKTIPTRECKALKQRPRF 467
Query: 272 QQYEHSPEFLSGGSLH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF 329
+ P +L G +L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF
Sbjct: 468 VALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLF 527
Query: 330 GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXX 389
+ H + P + +W + + + N++ Y
Sbjct: 528 HQ----HQLYGPFLIVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNT 573
Query: 390 XXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFS 449
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+
Sbjct: 574 IREYEWIHSQTK--RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYK 631
Query: 450 SLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLH 509
+L + + HR+L+TGTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH
Sbjct: 632 TLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLH 690
Query: 510 RMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQIS 568
++L P LLRRVKKDV K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+
Sbjct: 691 KVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSG 750
Query: 569 LINVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRV 627
+N+VMEL+K C H Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RV
Sbjct: 751 FLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRV 810
Query: 628 LIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAG 687
LI+SQ MLD+L +YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAG
Sbjct: 811 LIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAG 870
Query: 688 GLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTK 747
GLGINLA+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ K
Sbjct: 871 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAK 930
Query: 748 KKMVLEHLVVGRL 760
KKMVL+HLV+ R+
Sbjct: 931 KKMVLDHLVIQRM 943
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 1135 (404.6 bits), Expect = 3.4e-114, P = 3.4e-114
Identities = 272/676 (40%), Positives = 389/676 (57%)
Query: 115 AGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTKVNNF 170
+GD D K S+ QYL+KWKG SY+H TW E+ +K K + K +
Sbjct: 293 SGDFDTEKDESEV----QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEI 348
Query: 171 HR---QMSSNN----NAEEDFVA-IRPEWTTVDRILACR------GEDDEKEYLV-KYKE 215
+ ++S + N +++ + + ++ V+R++A + G+ D + + K
Sbjct: 349 KQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPDEIAHSRKP 408
Query: 216 LSYDE----CYWEYESDISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKP 268
+E C W S E E I K QS S N K+ P ++ K+
Sbjct: 409 APSNEPEYLCKW-MGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQR 467
Query: 269 KEFQQYEHSPEFLSGGSLH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLA 326
F + P +L G +L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+
Sbjct: 468 PRFVALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLS 527
Query: 327 SLFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXX 386
LF + H + P + +W + + + N++ Y
Sbjct: 528 YLFHQ----HQLYGPFLIVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMS 573
Query: 387 XXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSK 446
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS
Sbjct: 574 RNTIREYEWIHSQTK--RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSL 631
Query: 447 LFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQIS 506
L+ +L + + HR+L+TGTPLQN+L EL+ L+HF+ KF E+F+E+ +E
Sbjct: 632 LYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQ 690
Query: 507 RLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGA 565
LH++L P LLRRVKKDV K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+
Sbjct: 691 SLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGS 750
Query: 566 QISLINVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQG 624
+N+VMEL+K C H Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G
Sbjct: 751 TSGFLNIVMELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERG 810
Query: 625 HRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLST 684
+RVLI+SQ MLD+L +YLT K + ++R+DG + G R+ +D FNA S FCFLLST
Sbjct: 811 NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLST 870
Query: 685 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQ 744
RAGGLGINLA+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++
Sbjct: 871 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 930
Query: 745 MTKKKMVLEHLVVGRL 760
KKKMVL+HLV+ R+
Sbjct: 931 RAKKKMVLDHLVIQRM 946
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 1130 (402.8 bits), Expect = 1.2e-113, P = 1.2e-113
Identities = 268/659 (40%), Positives = 381/659 (57%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTKVNNFHR---QMSSNN----NA 180
QYL+KWKG SY+H TW E+ +K K + K + + ++S + N
Sbjct: 305 QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 364
Query: 181 EEDFVA-IRPEWTTVDRILACR------GEDD-EKEYLVKYKELSYDE----CYWEYESD 228
+++ + + ++ V+R++A + G+ D E K +E C W
Sbjct: 365 QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPGEIAHSRKPAPSNEPEYLCKW-MGLP 423
Query: 229 ISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS 285
S E E I K QS S N K+ P ++ K+ F + P +L G +
Sbjct: 424 YSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGEN 483
Query: 286 LH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF + H + P
Sbjct: 484 LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFL 539
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ +W + + + N++ Y
Sbjct: 540 IVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNTIREYEWIHSQTK-- 587
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+ +L + + HR+L+T
Sbjct: 588 RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 647
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKD 523
GTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH++L P LLRRVKKD
Sbjct: 648 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKD 706
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCH 582
V K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+ +N+VMEL+K C H
Sbjct: 707 VEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 766
Query: 583 PYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
Y+++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RVLI+SQ MLD+L
Sbjct: 767 CYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILA 826
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
+YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 827 EYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 886
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 887 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 945
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 1125 (401.1 bits), Expect = 3.9e-113, P = 3.9e-113
Identities = 267/659 (40%), Positives = 381/659 (57%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEF----LKAFKSNPRLRTKVNNFHR---QMSSNN----NA 180
QYL+KWKG SY+H TW E+ +K K + K + + ++S + N
Sbjct: 285 QYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVEYFNC 344
Query: 181 EEDFVA-IRPEWTTVDRILACR------GEDD-EKEYLVKYKELSYDE----CYWEYESD 228
+++ + + ++ V+R++A + G+ D E K +E C W
Sbjct: 345 QQELASELNKQYQIVERVIAVKTSKSTLGQTDFPGEIAHSRKPAPSNEPEYLCKW-MGLP 403
Query: 229 ISAFQPEIERFI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS 285
S E E I K QS S N K+ P ++ K+ F + P +L G +
Sbjct: 404 YSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGEN 463
Query: 286 LH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
L YQLEGLN+L SW K VILADEMGLGKTIQ+I+FL+ LF + H + P
Sbjct: 464 LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFL 519
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ +W + + + N++ Y
Sbjct: 520 IVVPLST-LTSWQREFEI-----WAPEINVV----VYIGDLMSRNTIREYEWIHSQTK-- 567
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
R+KF+ L+T+YE++ D L I W + VDE HRLKN DS L+ +L + + HR+L+T
Sbjct: 568 RLKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLIT 627
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKD 523
GTPLQN+L EL+ L+HF+ KF E+F+E+ +E LH++L P LLRRVKKD
Sbjct: 628 GTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKD 686
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCH 582
V K LP K E ILRVE+S+ QK+YYK ILTRNY+ L + G+ +N+VMEL+K C H
Sbjct: 687 VEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNH 746
Query: 583 PYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
++++ E + E+ E L+ SSGKL LLDK++ +L+E+G+RVLI+SQ MLD+L
Sbjct: 747 CHLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILA 806
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
+YLT K + ++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINLA+ADTV+I
Sbjct: 807 EYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVI 866
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
+DSDWNP DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 867 FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 925
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 881 (315.2 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 173/369 (46%), Positives = 255/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGT
Sbjct: 285 EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGT 344
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 345 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKT 404
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C
Sbjct: 405 DVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCN 464
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 465 HPYLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILE 522
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ER+ I+ FN NSSRF F+LSTRAGGLGINLA+AD VI+
Sbjct: 523 DYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVIL 582
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GR
Sbjct: 583 YDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 642
Query: 760 LKAQNINQV 768
L Q N++
Sbjct: 643 LIDQQSNKM 651
Score = 250 (93.1 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 228 DISAFQPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG 284
+I +P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG
Sbjct: 125 NIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGG 184
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPL 342
L YQ+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQAR 371
STL NW EF W P + V+ +VG AR
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDAR 273
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 881 (315.2 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 173/369 (46%), Positives = 255/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGT
Sbjct: 285 EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGT 344
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 345 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKT 404
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C
Sbjct: 405 DVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCN 464
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 465 HPYLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILE 522
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ER+ I+ FN NSSRF F+LSTRAGGLGINLA+AD VI+
Sbjct: 523 DYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVIL 582
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GR
Sbjct: 583 YDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 642
Query: 760 LKAQNINQV 768
L Q N++
Sbjct: 643 LIDQQSNKM 651
Score = 250 (93.1 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 228 DISAFQPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG 284
+I +P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG
Sbjct: 125 NIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGG 184
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPL 342
L YQ+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQAR 371
STL NW EF W P + V+ +VG AR
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDAR 273
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 888 (317.7 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 175/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 206 EWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 265
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 266 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKA 325
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
+V K LPPKKE+ + + LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 326 EVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 385
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T ++ L+ +SGK+ +LDK++ KL+EQG RVL++SQ +LD+LE
Sbjct: 386 HPYLFDGAEPGPPYTTDT--HLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILE 443
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ER+ ID FNA NSS+F F+LSTRAGGLGINLATAD VI+
Sbjct: 444 DYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVIL 503
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GR
Sbjct: 504 YDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 563
Query: 760 LKAQNINQV 768
L Q N++
Sbjct: 564 LIDQQSNKL 572
Score = 242 (90.2 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 54/144 (37%), Positives = 80/144 (55%)
Query: 233 QPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPY 289
+P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG+L Y
Sbjct: 51 RPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDY 110
Query: 290 QLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRN 347
Q+ GLN++ + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL N
Sbjct: 111 QVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHN 170
Query: 348 WEREFATWAPQMNVVMYVGTSQAR 371
W EF W P + V +G AR
Sbjct: 171 WMNEFKRWVPSLRAVCLIGDKDAR 194
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 897 (320.8 bits), Expect = 3.0e-112, Sum P(2) = 3.0e-112
Identities = 178/369 (48%), Positives = 255/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 264 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 323
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S E+F F N ++ + RLH +L P LLRR+K
Sbjct: 324 PLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 383
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 384 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCN 443
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 444 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 501
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N SS+F F+LSTRAGGLGINLATAD VI+
Sbjct: 502 DYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVIL 561
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 562 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 621
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 622 LVDQNLNKL 630
Score = 231 (86.4 bits), Expect = 3.0e-112, Sum P(2) = 3.0e-112
Identities = 50/139 (35%), Positives = 75/139 (53%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 116 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGL 173
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 174 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEF 233
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G R
Sbjct: 234 KRWVPTLRAVCLIGDKDQR 252
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 898 (321.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 177/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 399 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 458
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 459 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 516
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+
Sbjct: 517 DYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 576
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 577 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 637 LVDQNLNKI 645
Score = 229 (85.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 50/139 (35%), Positives = 76/139 (54%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 131 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGL 188
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 189 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 248
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G + R
Sbjct: 249 KRWVPTLRSVCLIGDKEQR 267
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 898 (321.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 177/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 399 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 458
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 459 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 516
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+
Sbjct: 517 DYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 576
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 577 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 637 LVDQNLNKI 645
Score = 229 (85.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 50/139 (35%), Positives = 76/139 (54%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 131 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGL 188
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 189 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 248
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G + R
Sbjct: 249 KRWVPTLRSVCLIGDKEQR 267
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 898 (321.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 177/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 399 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 458
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 459 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 516
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+
Sbjct: 517 DYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 576
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 577 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 637 LVDQNLNKI 645
Score = 229 (85.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 50/139 (35%), Positives = 76/139 (54%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 131 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGL 188
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 189 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 248
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G + R
Sbjct: 249 KRWVPTLRSVCLIGDKEQR 267
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 898 (321.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 177/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 399 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 458
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 459 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 516
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+
Sbjct: 517 DYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 576
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 577 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 636
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 637 LVDQNLNKI 645
Score = 229 (85.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 50/139 (35%), Positives = 76/139 (54%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 131 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGL 188
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 189 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 248
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G + R
Sbjct: 249 KRWVPTLRSVCLIGDKEQR 267
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 898 (321.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 177/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 278 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 337
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 338 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 397
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 398 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 457
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 458 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 515
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+
Sbjct: 516 DYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 575
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 576 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 635
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 636 LVDQNLNKI 644
Score = 229 (85.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 50/139 (35%), Positives = 76/139 (54%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 130 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGL 187
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 188 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 247
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G + R
Sbjct: 248 KKWVPTLRSVCLIGDKEQR 266
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 898 (321.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 177/369 (47%), Positives = 256/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 278 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 337
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 338 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 397
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 398 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCN 457
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 458 HPYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 515
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+
Sbjct: 516 DYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVIL 575
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 576 YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 635
Query: 760 LKAQNINQV 768
L QN+N++
Sbjct: 636 LVDQNLNKI 644
Score = 229 (85.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 50/139 (35%), Positives = 76/139 (54%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 130 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGL 187
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 188 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 247
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G + R
Sbjct: 248 KRWVPTLRSVCLIGDKEQR 266
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 881 (315.2 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 172/369 (46%), Positives = 255/369 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGT
Sbjct: 286 EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGT 345
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 346 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKT 405
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C
Sbjct: 406 DVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCN 465
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + + ++ +SGK+ LDK++ ++KEQG RVLI+SQ +LD+LE
Sbjct: 466 HPYLFDGAEPGPPYTTD--EHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILE 523
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ ++Y R+DG+ ER+ ID FNA NSS+F F+LSTRAGGLGINLA+AD VI+
Sbjct: 524 DYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASADVVIL 583
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GR
Sbjct: 584 YDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGR 643
Query: 760 LKAQNINQV 768
L Q N++
Sbjct: 644 LIDQQSNKL 652
Score = 244 (91.0 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 53/137 (38%), Positives = 76/137 (55%)
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNF 296
+ I + HR + +Q+ + ++ES K ++E SP ++ GG L YQ+ GLN+
Sbjct: 140 QSLISVGDYRHRRT--EQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNW 197
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREFAT 354
L + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL NW EF
Sbjct: 198 LISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKR 257
Query: 355 WAPQMNVVMYVGTSQAR 371
W P + V+ +VG R
Sbjct: 258 WVPSLRVICFVGDKDVR 274
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 1110 (395.8 bits), Expect = 1.1e-111, P = 1.1e-111
Identities = 270/650 (41%), Positives = 380/650 (58%)
Query: 132 QYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEW 191
QYL+KWKG SY+H TW E E L+ K L+ K+ NF ++ + ++ + PE
Sbjct: 310 QYLIKWKGWSYIHSTWESE-ESLQQQKVKG-LK-KLENFKKK---EDEIKQWLGKVSPE- 362
Query: 192 TTVDRILACRGE---DDEKEYLV------KYKELSYDE----CYWEYESDISAFQPEIER 238
V+ C+ E + K+Y + K +E C W S E E
Sbjct: 363 -DVE-YFNCQQELASELNKQYQIVERVIGNRKPAPSNEPEYLCKW-MGLPYSECSWEDEA 419
Query: 239 FI--KIQSRSHR-SSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLH--PYQLEG 293
I K QS S N K+ P ++ K+ F + P +L G +L YQLEG
Sbjct: 420 LIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGENLELRDYQLEG 479
Query: 294 LNFLRFSWSKQTH-VILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREF 352
LN+L SW +++ VILADEMGLGKTIQ+I+FL+ LF + H + P +
Sbjct: 480 LNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQ----HQLYGPFLIVVPLST-L 534
Query: 353 ATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLT 412
+W + + + N++ Y R+KF+ L+T
Sbjct: 535 TSWQREFEI-----WAPEINVV----VYIGDLMSRNTIREYEWIHSQTK--RLKFNALIT 583
Query: 413 SYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD 472
+YE++ D L I W + VDE HRLKN DS L+ +L + + HR+L+TGTPLQN+L
Sbjct: 584 TYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLK 643
Query: 473 ELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKK 532
EL+ L+HF+ KF E+F+E+ +E LH++L P LLRRVKKDV K LP K
Sbjct: 644 ELWSLLHFIMPEKFEFWEDFEEDHGK-GRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV 702
Query: 533 ELILRVELSSKQKEYYKAILTRNYQILTR-RGGAQISLINVVMELRKLCCHPYMLEGVEP 591
E ILRVE+S+ QK+YYK ILTRNY+ L + G+ +N+VMEL+K C H Y+++ E
Sbjct: 703 EQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE 762
Query: 592 -DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
+ E+ E L+ SSGKL LLDK++ +L+E+G+RVLI+SQ MLD+L +YLT K +
Sbjct: 763 NERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP 822
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
++R+DG + G R+ +D FNA S FCFLLSTRAGGLGINLA+ADTV+I+DSDWNP
Sbjct: 823 FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN 882
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
DLQA ARAHR+GQ +V I+RL+T+G++EE +++ KKKMVL+HLV+ R+
Sbjct: 883 DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRM 932
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 1110 (395.8 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 273/677 (40%), Positives = 398/677 (58%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 300 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 356
Query: 176 SNN----NAEEDFVA-----------IRPEWTTVDRILACRGEDDEKEYLV------KYK 214
NA + V + ++ V+RI+ + K YLV K
Sbjct: 357 ETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERII---DKIQCKIYLVYLTAHSNQK 413
Query: 215 ELS-YDECYWEYES-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKP 268
+ Y + Y +++ S E I K Q+ S N+ K++P +D ++P
Sbjct: 414 SAAGYPDYYCKWQGLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRP 473
Query: 269 KEFQQYEHSPEFLSG--G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFL 325
+ F + P ++ G G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL
Sbjct: 474 R-FVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFL 532
Query: 326 ASLFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXX 385
LF E H + P + +W Q + + SQ ++ Y
Sbjct: 533 NYLFHE----HQLYGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDIN 578
Query: 386 XXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDS 445
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS
Sbjct: 579 SRNMIRTHEWMHPQTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDS 636
Query: 446 KLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQI 505
L+ +L + + HR+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E
Sbjct: 637 LLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGY 695
Query: 506 SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-G 564
+ LH+ L P LLRRVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G
Sbjct: 696 ASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKG 755
Query: 565 AQISLINVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQ 623
+ +N++MEL+K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+
Sbjct: 756 STSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRER 815
Query: 624 GHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 683
G+RVLI+SQ MLD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLS
Sbjct: 816 GNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLS 875
Query: 684 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMM 743
TRAGGLGINLA+ADTV+I+DSDWNP DLQA ARAHR+GQ +V I+RL+T+GS+EE ++
Sbjct: 876 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIL 935
Query: 744 QMTKKKMVLEHLVVGRL 760
+ KKKMVL+HLV+ R+
Sbjct: 936 ERAKKKMVLDHLVIQRM 952
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 850 (304.3 bits), Expect = 1.7e-111, Sum P(3) = 1.7e-111
Identities = 169/365 (46%), Positives = 254/365 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
KFDV T+YEM+ LK + W+ +I+DE HR+KN+ SKL ++++ ++ +R+L+TGT
Sbjct: 231 KFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGT 290
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD---INQEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F + + + RLH++L P LLRR+K
Sbjct: 291 PLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKS 350
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS-LINVVMELRKLCC 581
DV K L PKKE+ + V LS Q+E+Y +L ++ I+ G + + L+N++M LRK
Sbjct: 351 DVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVN 410
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + + L+++SGK+ +LDK+++K KEQG RVLI+SQF MLDLLE
Sbjct: 411 HPYLFDGAEPGPPFTTD--QHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLE 468
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
D+ ++ ++Y R+DG +R I+ +NA +S +F F+L+TRAGGLGINLATAD VII
Sbjct: 469 DFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVII 528
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP +DLQAM RAHR+GQ +V +FRLIT +++ER+++ + K+ L+++V+ GR
Sbjct: 529 YDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGR 588
Query: 760 L-KAQ 763
+ +AQ
Sbjct: 589 MSEAQ 593
Score = 247 (92.0 bits), Expect = 1.7e-111, Sum P(3) = 1.7e-111
Identities = 49/133 (36%), Positives = 79/133 (59%)
Query: 247 HRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTH 306
HR +Q+ + V ++ K + ++ SP ++ G + YQ+ GLN+L + +
Sbjct: 94 HRHRKTEQEEDEEMVADAIKSD-DLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKIN 152
Query: 307 VILADEMGLGKTIQSIAFLASL--FGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMY 364
ILADEMGLGKT+Q+I+ + + + + SPHLV+ P STL+NW EF W P +N V+
Sbjct: 153 GILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVL 212
Query: 365 VGTSQARN-IIRE 376
+G ARN ++R+
Sbjct: 213 IGDEAARNQVLRD 225
Score = 38 (18.4 bits), Expect = 1.7e-111, Sum P(3) = 1.7e-111
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 149 PEK-EFLKAFKSNPRLRTKVNNFHRQMSSNN 178
PE + +FK RL K NF +SS +
Sbjct: 37 PESSDAADSFKRFERLLQKTENFSHCLSSGD 67
Score = 38 (18.4 bits), Expect = 1.7e-111, Sum P(3) = 1.7e-111
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 22 ESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESE 61
E DD+ E + ++FER+++ C + G+++
Sbjct: 32 EVDDEP--ESSDAADSFKRFERLLQKTENFSHCLSSGDAK 69
Score = 38 (18.4 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 433 IVDEGHRLKNKDSKLFSSLKQ 453
+V E HRL + +F L+Q
Sbjct: 911 LVCETHRLGHDKENVFEELRQ 931
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 1109 (395.4 bits), Expect = 1.9e-111, P = 1.9e-111
Identities = 266/664 (40%), Positives = 393/664 (59%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 295 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 351
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWEYE 226
++ E+ + L +D K+Y + + ++ Y + Y +++
Sbjct: 352 ETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQ 408
Query: 227 S-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFL 281
S E I K Q+ S N+ K++P +D ++P+ F + P ++
Sbjct: 409 GLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPSYI 467
Query: 282 SG--G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLV 338
G G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H +
Sbjct: 468 GGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----HQL 523
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
P + +W Q + + SQ ++ Y
Sbjct: 524 YGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDINSRNMIRTHEWMHP 573
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + H
Sbjct: 574 QTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNH 631
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
R+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLR
Sbjct: 632 RLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLR 690
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELR 577
RVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+
Sbjct: 691 RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK 750
Query: 578 KLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ M
Sbjct: 751 KCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 810
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+A
Sbjct: 811 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 870
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTV+I+DSDWNP DLQA ARAHR G ++V I+RL+T+GS+EE +++ KKKMVL+HLV
Sbjct: 871 DTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 930
Query: 757 VGRL 760
+ R+
Sbjct: 931 IQRM 934
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 1109 (395.4 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 266/664 (40%), Positives = 393/664 (59%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 295 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 351
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWEYE 226
++ E+ + L +D K+Y + + ++ Y + Y +++
Sbjct: 352 ETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQ 408
Query: 227 S-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFL 281
S E I K Q+ S N+ K++P +D ++P+ F + P ++
Sbjct: 409 GLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPSYI 467
Query: 282 SG--G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLV 338
G G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H +
Sbjct: 468 GGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----HQL 523
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
P + +W Q + + SQ ++ Y
Sbjct: 524 YGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDINSRNMIRTHEWMHP 573
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + H
Sbjct: 574 QTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNH 631
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
R+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLR
Sbjct: 632 RLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLR 690
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELR 577
RVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+
Sbjct: 691 RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK 750
Query: 578 KLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ M
Sbjct: 751 KCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 810
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+A
Sbjct: 811 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 870
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTV+I+DSDWNP DLQA ARAHR G ++V I+RL+T+GS+EE +++ KKKMVL+HLV
Sbjct: 871 DTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 930
Query: 757 VGRL 760
+ R+
Sbjct: 931 IQRM 934
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 1109 (395.4 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 266/664 (40%), Positives = 393/664 (59%)
Query: 116 GDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMS 175
GD + +K+ QYL+KWKG S++H TW E E LK + N R K++N+ ++
Sbjct: 296 GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETE-ETLK--QQNVRGMKKLDNYKKKDQ 352
Query: 176 SNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS---------YDECYWEYE 226
++ E+ + L +D K+Y + + ++ Y + Y +++
Sbjct: 353 ETKRWLKNASPEDVEYYNCQQELT---DDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQ 409
Query: 227 S-DISAFQPEIERFI--KIQSR-SHRSSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFL 281
S E I K Q+ S N+ K++P +D ++P+ F + P ++
Sbjct: 410 GLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPR-FVALKKQPSYI 468
Query: 282 SG--G-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLV 338
G G L YQL GLN+L SW K ILADEMGLGKTIQ+I+FL LF E H +
Sbjct: 469 GGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE----HQL 524
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXX 398
P + +W Q + + SQ ++ Y
Sbjct: 525 YGPFLLVVPLST-LTSW--QREIQTWA--SQMNAVV-----YLGDINSRNMIRTHEWMHP 574
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
R+KF++LLT+YE++ D A L + W + VDE HRLKN DS L+ +L + + H
Sbjct: 575 QTK--RLKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNH 632
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
R+L+TGTPLQN+L EL+ L+HF+ KF S E+F+EE +E + LH+ L P LLR
Sbjct: 633 RLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK-GREYGYASLHKELEPFLLR 691
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG-GAQISLINVVMELR 577
RVKKDV K LP K E ILR+E+S+ QK+YYK ILTRNY+ L++ G+ +N++MEL+
Sbjct: 692 RVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELK 751
Query: 578 KLCCHPYMLEGVEP-DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHM 636
K C H Y+++ + + + E+ + L+ SSGKL LLDK++++L+E+G+RVLI+SQ M
Sbjct: 752 KCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 811
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
LD+L +YL ++++ ++R+DG + G R+ +D FNA+ S FCFLLSTRAGGLGINLA+A
Sbjct: 812 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 871
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
DTV+I+DSDWNP DLQA ARAHR G ++V I+RL+T+GS+EE +++ KKKMVL+HLV
Sbjct: 872 DTVVIFDSDWNPQNDLQAQARAHRHGYLSQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 931
Query: 757 VGRL 760
+ R+
Sbjct: 932 IQRM 935
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
Identities = 261/651 (40%), Positives = 382/651 (58%)
Query: 131 KQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSS----NNNAEEDFVA 186
+Q+ VKW G S+LH TW E E A + L+ KV N+ ++ +A+++++
Sbjct: 237 QQFFVKWTGWSHLHNTW--ESENSLALMNAKGLK-KVQNYVKKQKEVEMWKRSADKEYIE 293
Query: 187 -----------IRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPE 235
+ E+ V+R++A + D E Y SD + +
Sbjct: 294 FFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATEYLIKWSGLPY-SDCTWEDEK 352
Query: 236 IERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLS--GGSLHP---YQ 290
+ +I++ HR K + +V K+PK F+++E P+FL G S H YQ
Sbjct: 353 MVAPEQIKAYYHRIENLKSPNKNSNVLR--KRPK-FEKFESMPDFLKTDGESTHKLRDYQ 409
Query: 291 LEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWER 350
LEGLN++ ++W K ILADEMGLGKTIQSI+ LASLF R + P +
Sbjct: 410 LEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLF-HRYD---LAGPYLVVVPLST 465
Query: 351 EFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVL 410
A W + + + N++ Y ++K + +
Sbjct: 466 -MAAWQKE-----FAQWAPEMNLV----VYMGDVVSRDMIRQYEWFVGGTK--KMKINAI 513
Query: 411 LTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNN 470
LT+YE++ D A L I W ++VDE HRLKN +S L+ SL Q+ H++L+TGTPLQN+
Sbjct: 514 LTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNS 573
Query: 471 LDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPP 530
L EL+ L+HF+ KF EEF+ + N + IS LH+ L P LLRRVKKDV K LPP
Sbjct: 574 LKELWALLHFIMPEKFDCWEEFETAHNESNHKG-ISALHKKLEPFLLRRVKKDVEKSLPP 632
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS-LINVVMELRKLCCHPYMLEGV 589
K E ILRV++++ QK++YK ILT+NY+ L++ I+ +N+VMEL+K C H +
Sbjct: 633 KTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTRQY 692
Query: 590 EPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
+ +D +QLL+SSGKL LLDK++ +LK++GHRVLI+SQ MLD+L++YL +++
Sbjct: 693 DHIYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRF 752
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
+R+DG + R+ +D +NA S+ F FLLSTRAGGLGINLATADTVII+DSDWNP
Sbjct: 753 PSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQ 812
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
DLQAM+RAHR+GQT V I+RL+T+GS+EE +++ K+K+VL+HLV+ R+
Sbjct: 813 NDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQRM 863
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 860 (307.8 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 171/371 (46%), Positives = 254/371 (68%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
KFDV +T+YE+ + ++ K W+ +I+DE HR+KN++S L ++ ++++ R+L+TGT
Sbjct: 375 KFDVCITTYEVAIREKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVRMFNSQFRLLITGT 434
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI-----NQEEQISRLHRMLAPHLLRRV 520
PLQNNL EL+ L++FL F S ++F + F D+ NQ+E I +LH++L P LLRR+
Sbjct: 435 PLQNNLHELWSLLNFLLPDVFSSSDDFDKWF-DLANNTENQQEVIDKLHKVLRPFLLRRI 493
Query: 521 KKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ--ILTRRGGA-QISLINVVMELR 577
K +V K LPPKKE+ L V LS+ QKE+YK +L+++ ++ +G ++ L+N+ M+LR
Sbjct: 494 KTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDLDAVVVGAKGNTGRVRLLNICMQLR 553
Query: 578 KLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHML 637
K C HPY+ +G E + T E L+++SGK+ LLDK++ KLKE+G RVLI+SQ ML
Sbjct: 554 KACNHPYLFDGAEEEPYTTGE---HLIDNSGKMALLDKLLKKLKERGSRVLIFSQMSRML 610
Query: 638 DLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATAD 697
D+LEDY+ ++ ++Y RIDG R+ I+ +N S F FLL+TRAGGLGI L TAD
Sbjct: 611 DILEDYMLYRGYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNTAD 670
Query: 698 TVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
VI++DSDWNP DLQA RAHR+GQT V ++R +T S+EE+M++ + K+ L+ LV+
Sbjct: 671 IVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVTENSMEEKMVEKAEMKLQLDALVI 730
Query: 758 --GRLKAQNIN 766
GRL N N
Sbjct: 731 QQGRLVEANKN 741
Score = 231 (86.4 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 48/123 (39%), Positives = 73/123 (59%)
Query: 262 TESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQS 321
T ++P F + SP ++ G++ YQ+ GLN+L + + + ILADEMGLGKT+Q+
Sbjct: 252 TMEEEEPHSFNFFTSSPPYIKSGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQT 311
Query: 322 IAFLASLF---GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYE 378
I+ L L G R PHL++AP STL W +EF W P + VV + G+ + R I++ +
Sbjct: 312 ISLLGYLSEYKGIR-GPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKNQ 370
Query: 379 FYF 381
F
Sbjct: 371 LIF 373
Score = 41 (19.5 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 487 GSLEEFQEE--FKDINQEEQ 504
G L E +EE F D+++EEQ
Sbjct: 899 GELPEEEEEPDFGDLSKEEQ 918
Score = 39 (18.8 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPE 279
S S S NK+ SP + + PK + + E
Sbjct: 36 SSSSSSVGNKRNESPTISSSGNQSPKSMENDNENEE 71
Score = 38 (18.4 bits), Expect = 3.2e-110, Sum P(3) = 3.2e-110
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 160 NPRLRTKVNNFHRQMSSNNNAEEDFV 185
+P + + N + M ++N EED V
Sbjct: 49 SPTISSSGNQSPKSMENDNENEEDEV 74
Score = 38 (18.4 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 489 LEEFQEEFKDINQEEQ 504
+EE +EE +++ +EE+
Sbjct: 1192 MEEEEEEEEEVEEEEE 1207
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 908 (324.7 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 179/368 (48%), Positives = 256/368 (69%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
KFD+ +TS+EM + +L+ W+ +I+DE HR+KN++S L +++ +ST +R+L+TGT
Sbjct: 293 KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 352
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---DINQEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S E F E F+ + +Q+E + +LH++L P LLRR+K
Sbjct: 353 PLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 412
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCH 582
DV K LPPKKE IL+V +S QK+YYKA+L ++ +++ GG + L+N+ M+LRK C H
Sbjct: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNG-GGERKRLLNIAMQLRKCCNH 471
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +G EP T L+ ++GK+ LLDK++ KLK++ RVLI+SQ +LD+LED
Sbjct: 472 PYLFQGAEPGPPYTTGD--HLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILED 529
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
YL ++ +QY RIDG GG ER I+ +N S +F FLLSTRAGGLGINLATAD VI+Y
Sbjct: 530 YLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILY 589
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRL 760
DSDWNP DLQA RAHR+GQ +V +FR T +IE ++++ KK+ L+ LV+ GRL
Sbjct: 590 DSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRL 649
Query: 761 KAQN-INQ 767
Q +N+
Sbjct: 650 AEQKTVNK 657
Score = 198 (74.8 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 46/95 (48%), Positives = 59/95 (62%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER-IS-PHLVVAP 341
G L YQL GLN+L + + ILADEMGLGKT+Q+I+ LA L R I+ PH+VVAP
Sbjct: 192 GKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 251
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
STL NW E + P + V ++G + R IRE
Sbjct: 252 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE 286
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 886 (316.9 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 180/369 (48%), Positives = 254/369 (68%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ ++ A K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 262 EWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 321
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S E+F F N + + RLH +L P LLRR+K
Sbjct: 322 PLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTKLVERLHTVLRPFLLRRIKA 381
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K L PKKE+ + V LS Q+E+Y IL ++ IL G ++ L+NV+M+LRK C
Sbjct: 382 DVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQLRKCCN 441
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 442 HPYLFDGAEPGPPYTTDL--HLVVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILE 499
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ + Y R+DG+ ERQI I+ FN NSS+F F+LSTRAGGLGINLATAD VII
Sbjct: 500 DYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGLGINLATADVVII 559
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQ +V +FR IT ++EER+++ + K+ L+ +V+ GR
Sbjct: 560 YDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR 619
Query: 760 LKAQNINQV 768
L ++N++
Sbjct: 620 LVDPSMNKL 628
Score = 220 (82.5 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 49/145 (33%), Positives = 78/145 (53%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + HR + +Q+ + ++E++K +++ SP ++ G L YQ+ GL
Sbjct: 114 EKQNLLSAGDNRHRRT--EQEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGL 171
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 172 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEF 231
Query: 353 ATWAPQMNVVMYVGTSQARN-IIRE 376
W P + V +G + R IR+
Sbjct: 232 KRWVPSLKAVCLIGDREERTAFIRD 256
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 863 (308.9 bits), Expect = 1.0e-109, Sum P(2) = 1.0e-109
Identities = 171/360 (47%), Positives = 247/360 (68%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL +++ T +R+LLTGT
Sbjct: 242 EWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGT 301
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD--INQEEQISRLHRMLAPHLLRRVKKD 523
PLQNNL EL+ L++FL F S +F F + ++ + RLH +L P LLRR+K +
Sbjct: 302 PLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNCLGDQKLVERLHAVLRPFLLRRIKAE 361
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCH 582
V K LPPKKE+ + + LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C H
Sbjct: 362 VEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNH 421
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +G EP T ++ L+ +SGK+ LDK++ K++EQG RVLI+SQ +LD+LED
Sbjct: 422 PYLFDGAEPGPPYTTDT--HLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILED 479
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
Y ++ ++Y R+DG R+ ID FNA NSS+F F+LSTRAGGLGINLATAD VI+Y
Sbjct: 480 YCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILY 539
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRL 760
DSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GRL
Sbjct: 540 DSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSIVIQQGRL 599
Score = 241 (89.9 bits), Expect = 1.0e-109, Sum P(2) = 1.0e-109
Identities = 51/141 (36%), Positives = 76/141 (53%)
Query: 233 QPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLE 292
Q E + + + HR + +Q+ + ++ES K ++E SP ++ G+L YQ+
Sbjct: 92 QDEKQNLLSVGDNRHRRT--EQEEDEELLSESRKADNVLVRFEESPSYIKNGTLRDYQIR 149
Query: 293 GLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWER 350
GLN++ + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL NW
Sbjct: 150 GLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMN 209
Query: 351 EFATWAPQMNVVMYVGTSQAR 371
EF W P + V +G R
Sbjct: 210 EFKRWVPTLKAVCLIGNKDER 230
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 851 (304.6 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 170/369 (46%), Positives = 250/369 (67%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM + + K W+ +++DE HR+KN+ SKL L+++ T +R+L+TGT
Sbjct: 227 EWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGT 286
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD---INQEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S E+F E F + + I+RLH +L P LLRR+K
Sbjct: 287 PLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLKA 346
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQ-ISLINVVMELRKLCC 581
+V K L PKKE+ + V LS Q+++Y +L ++ ++ G + + L N++M+LRK
Sbjct: 347 EVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCTN 406
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T ++ L+ +SGK+ +LDK++ KL+EQG RVLI+SQ MLD+LE
Sbjct: 407 HPYLFDGAEPGPPYTTDT--HLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILE 464
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY ++ + Y R+DG+ +R +I FN NS++F F+LSTRAGGLGINLATAD VII
Sbjct: 465 DYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVII 524
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GR 759
YDSDWNP DLQAM RAHR+GQ +V +FRLIT ++EE++++ + K+ L+ +V+ GR
Sbjct: 525 YDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGR 584
Query: 760 LKAQNINQV 768
L NQ+
Sbjct: 585 LVDNRSNQL 593
Score = 240 (89.5 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 49/133 (36%), Positives = 75/133 (56%)
Query: 247 HRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTH 306
HR +Q+ + + E + KE +++ SP ++ G + YQ+ GLN++ + +
Sbjct: 90 HRHRKTEQEEDEELLAEDSAT-KEIFRFDASPAYIKSGEMRDYQIRGLNWMISLYENGIN 148
Query: 307 VILADEMGLGKTIQSIAFLASL--FGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMY 364
ILADEMGLGKT+Q+I+ L L F + PH+V+ P STL+NW EF W P + V
Sbjct: 149 GILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCL 208
Query: 365 VGTSQARN-IIRE 376
+G RN IR+
Sbjct: 209 IGDQDTRNTFIRD 221
Score = 37 (18.1 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEE 503
++++ G L +N L+ +FG+ + F + DI E+
Sbjct: 577 KMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDED 621
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 858 (307.1 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 168/362 (46%), Positives = 248/362 (68%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
FDV +TSYEMI + + LK W+ +I+DE HR+KN++S L ++ +++R+R+L+TGTP
Sbjct: 286 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 345
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ--ISRLHRMLAPHLLRRVKKDV 524
LQNN+ EL+ L++FL FG E F + F Q+ + +LHR+L P LLRRVK DV
Sbjct: 346 LQNNIHELWALLNFLLPDVFGDSEAFDQWFSGEGQDSDTVVQQLHRVLRPFLLRRVKADV 405
Query: 525 MKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCC 581
K L PKKE+ L ++++ Q+ +Y+ IL ++ + G + S L+N+VM+LRK C
Sbjct: 406 EKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCN 465
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ EG EP T + + L+ +SGK+ +LDK++ +LK QG RVLI+SQ +LD+LE
Sbjct: 466 HPYLFEGAEPGPPYTTD--EHLVYNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILE 523
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
DY F++++Y RIDG +R ID +N S +F FLL+TRAGGLGINL TAD VI+
Sbjct: 524 DYCVFREYKYSRIDGGTAHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVIL 583
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLK 761
+DSDWNP ADLQAM RAHR+GQT +V ++R + +IEE++++ +K+ L+ LV+ + +
Sbjct: 584 FDSDWNPQADLQAMDRAHRIGQTKQVYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQGR 643
Query: 762 AQ 763
AQ
Sbjct: 644 AQ 645
Score = 214 (80.4 bits), Expect = 2.4e-106, Sum P(2) = 2.4e-106
Identities = 46/101 (45%), Positives = 62/101 (61%)
Query: 274 YEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL---FG 330
+ SP F+ G ++ YQ+ GLN+L ILADEMGLGKT+Q+I+FL L G
Sbjct: 175 FRESPAFIQG-TMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMG 233
Query: 331 ERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
PHLV+ P STL NW+REF W P++NV++ G + R
Sbjct: 234 IT-GPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEER 273
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 234/564 (41%), Positives = 341/564 (60%)
Query: 228 DISAFQPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG 284
+I +P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG
Sbjct: 125 NIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGG 184
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPL 342
L YQ+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQ 402
STL NW EF W P + V+ +VG AR E P
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM-MPG------------------- 284
Query: 403 DRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLL 462
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LL
Sbjct: 285 ---EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLL 341
Query: 463 TGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRR 519
TGTPLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRK 578
+K DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRK 461
Query: 579 LCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLD 638
C HPY+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD
Sbjct: 462 CCNHPYLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 639 LLEDYLTFKKWQYERIDGKVGGAER-----QI-------RIDRFNAKNSSRFCFLLSTRA 686
+LEDY ++ ++Y R+DG+ ER QI I+ FN NSSRF F+LSTRA
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFMLSTRA 579
Query: 687 GGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMT 746
GGLGINLA+AD VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++
Sbjct: 580 GGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERA 639
Query: 747 KKKMVLEHLVV--GRLKAQNINQV 768
+ K+ L+ +V+ GRL Q N++
Sbjct: 640 EIKLRLDSIVIQQGRLIDQQSNKM 663
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 232/564 (41%), Positives = 341/564 (60%)
Query: 228 DISAFQPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG 284
+I +P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG
Sbjct: 125 NIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGG 184
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPL 342
L YQ+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQ 402
STL NW EF W P + V+ +VG AR E P
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM-MPG------------------- 284
Query: 403 DRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLL 462
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LL
Sbjct: 285 ---EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLL 341
Query: 463 TGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRR 519
TGTPLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRK 578
+K DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRK 461
Query: 579 LCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLD 638
C HPY+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD
Sbjct: 462 CCNHPYLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 639 LLEDYLTFKKWQYERIDGKVGGAERQIR------------IDRFNAKNSSRFCFLLSTRA 686
+LEDY ++ ++Y R+DG+ ER+ + I+ FN NSSRF F+LSTRA
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRA 579
Query: 687 GGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMT 746
GGLGINLA+AD VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++
Sbjct: 580 GGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERA 639
Query: 747 KKKMVLEHLVV--GRLKAQNINQV 768
+ K+ L+ +V+ GRL Q N++
Sbjct: 640 EIKLRLDSIVIQQGRLIDQQSNKM 663
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 232/564 (41%), Positives = 341/564 (60%)
Query: 228 DISAFQPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG 284
+I +P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG
Sbjct: 125 NIKLGRPRIKKDDKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGG 184
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPL 342
L YQ+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P
Sbjct: 185 PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 244
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQ 402
STL NW EF W P + V+ +VG AR E P
Sbjct: 245 STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEM-MPG------------------- 284
Query: 403 DRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLL 462
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LL
Sbjct: 285 ---EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLL 341
Query: 463 TGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRR 519
TGTPLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR
Sbjct: 342 TGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRR 401
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRK 578
+K DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRK 461
Query: 579 LCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLD 638
C HPY+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD
Sbjct: 462 CCNHPYLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 639 LLEDYLTFKKWQYERIDGKVGGAERQIR------------IDRFNAKNSSRFCFLLSTRA 686
+LEDY ++ ++Y R+DG+ ER+ + I+ FN NSSRF F+LSTRA
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRA 579
Query: 687 GGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMT 746
GGLGINLA+AD VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++
Sbjct: 580 GGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERA 639
Query: 747 KKKMVLEHLVV--GRLKAQNINQV 768
+ K+ L+ +V+ GRL Q N++
Sbjct: 640 EIKLRLDSIVIQQGRLIDQQSNKM 663
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 1015 (362.4 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 261/714 (36%), Positives = 384/714 (53%)
Query: 92 CPECVSPLNDIDKILDCE----MRPTVAG-DSDVSKLGSKQIFVKQYLVKWKGLSYLHCT 146
C EC DI++I+ + P+ A ++ + ++Y V+ KG SYLHC
Sbjct: 349 CNECSMHPCDIEEIIAWRTLNSLYPSKATLSNNFVSTSDLSFWSREYFVRSKGKSYLHCF 408
Query: 147 WVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDE 206
W +L K NF +++ +A + + + +T +D++ + +
Sbjct: 409 WC-SASWLAGISL-----AKKKNFDGLENASYDATKPIIPV--SYTIIDKVWDVQYRSGK 460
Query: 207 KEYLVKYK----------ELSYDECYWE----YESDISAFQPEIERF---IKIQSRSHRS 249
KYK E+++ W Y S+ E +R ++ S
Sbjct: 461 NARTAKYKTKKHQLKAISEVTFAFVSWRGLTYYMSNWEPPPKETDRNRWKAWLKGYSDLL 520
Query: 250 SCNKQKSSPQDVTESTKKPKEFQQYE-HS-PEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
C + +P T S F E HS P F+ GG+L PYQL+GLN+L W
Sbjct: 521 ECLWIEKAP---TASINIDLPFTNLEWHSQPSFIKGGTLMPYQLKGLNWLYLRWYTHHPC 577
Query: 308 ILADEMGLGKTIQSIAFLASLF-GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 366
ILADEMGLGKT+Q I+F++ LF + P LV+ P +T+ NWERE WAP + + + VG
Sbjct: 578 ILADEMGLGKTVQVISFISVLFYRHKCFPVLVIVPHATVANWERELKKWAPFLQINVLVG 637
Query: 367 TSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKP 426
+ + R+++R+Y + VL+ S + + + L+
Sbjct: 638 SEKNRSLVRDYRLI-----------------NQKDPKHVSTHVLVISASNVEREISLLRK 680
Query: 427 IKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
+W+ +IVDEG RLKN S LF L + ++LLTGTPLQNN+ ELF L+ FL+ K
Sbjct: 681 FQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRELFNLLQFLNPMKI 740
Query: 487 GSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKE 546
+ E ++ + I+ E+ ++ LH++L P LRRVK +V+ P K E+I+ + ++ QK
Sbjct: 741 NAAE-LEKRYSIIDTEK-VTELHQILKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKG 798
Query: 547 YYKAILTRNYQIL--------TRRGGAQ--ISLINVVMELRKLCCHPYMLEGVEPDIEDT 596
YK+IL++N +L T G Q SL N++M+LRK HPY+ PDIED
Sbjct: 799 LYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNILMQLRKTLAHPYIYS---PDIEDR 855
Query: 597 NESF----KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYE 652
N + + L E+S K +L ++ KL +GHR+L++SQF LD+LED+ +K Y
Sbjct: 856 NLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILLFSQFIQQLDILEDWFEYKNIAYA 915
Query: 653 RIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADL 712
R DG ERQ ID FNA NS CFLLSTRAGG+GINLA+ADTVII D D+NPH D+
Sbjct: 916 RFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGVGINLASADTVIILDPDFNPHQDM 975
Query: 713 QAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
QA+ARAHR GQ KV++F L TR S+EE+++Q +KK+VL+HL+V L QN N
Sbjct: 976 QAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKKLVLDHLIVESLD-QNHN 1028
Score = 51 (23.0 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 61 ENLMSCDTCTYAYHAKCL-VPPLKAPP-----SGSWRCPECVSPLNDI 102
+N + CD C+ YH C +P L + CP C D+
Sbjct: 228 KNFVYCDHCSNVYHYDCSPLPSLNKETRNYSQQNGFICPLCSKNSKDV 275
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 231/559 (41%), Positives = 340/559 (60%)
Query: 233 QPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPY 289
+P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG L Y
Sbjct: 106 RPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDY 165
Query: 290 QLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRN 347
Q+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL N
Sbjct: 166 QIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHN 225
Query: 348 WEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKF 407
W EF W P + V+ +VG AR E P ++
Sbjct: 226 WMNEFKRWVPSLRVICFVGDKDARAAFIRDEM-MPG----------------------EW 262
Query: 408 DVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPL 467
DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGTPL
Sbjct: 263 DVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPL 322
Query: 468 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKKDV 524
QNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K DV
Sbjct: 323 QNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV 382
Query: 525 MKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHP 583
K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C HP
Sbjct: 383 EKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHP 442
Query: 584 YMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY 643
Y+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LEDY
Sbjct: 443 YLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDY 500
Query: 644 LTFKKWQYERIDGKVGGAERQIR------------IDRFNAKNSSRFCFLLSTRAGGLGI 691
++ ++Y R+DG+ ER+ + I+ FNA NSS+F F+LSTRAGGLGI
Sbjct: 501 CMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGI 560
Query: 692 NLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMV 751
NLA+AD VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+
Sbjct: 561 NLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLR 620
Query: 752 LEHLVV--GRLKAQNINQV 768
L+ +V+ GRL Q N++
Sbjct: 621 LDSIVIQQGRLIDQQSNKL 639
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 231/559 (41%), Positives = 340/559 (60%)
Query: 233 QPEIERFIK---IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPY 289
+P I++ K I + +R +Q+ + ++ES K ++E SP ++ GG L Y
Sbjct: 127 RPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKGGPLRDY 186
Query: 290 QLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRN 347
Q+ GLN+L + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL N
Sbjct: 187 QIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHN 246
Query: 348 WEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKF 407
W EF W P + V+ +VG AR E P ++
Sbjct: 247 WMNEFKRWVPSLRVICFVGDKDARAAFIRDEM-MPG----------------------EW 283
Query: 408 DVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPL 467
DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGTPL
Sbjct: 284 DVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPL 343
Query: 468 QNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKKDV 524
QNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K DV
Sbjct: 344 QNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDV 403
Query: 525 MKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHP 583
K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C HP
Sbjct: 404 EKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHP 463
Query: 584 YMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY 643
Y+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LEDY
Sbjct: 464 YLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDY 521
Query: 644 LTFKKWQYERIDGKVGGAERQIR------------IDRFNAKNSSRFCFLLSTRAGGLGI 691
++ ++Y R+DG+ ER+ + I+ FNA NSS+F F+LSTRAGGLGI
Sbjct: 522 CMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGI 581
Query: 692 NLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMV 751
NLA+AD VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+
Sbjct: 582 NLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLR 641
Query: 752 LEHLVV--GRLKAQNINQV 768
L+ +V+ GRL Q N++
Sbjct: 642 LDSIVIQQGRLIDQQSNKL 660
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 233/562 (41%), Positives = 342/562 (60%)
Query: 237 ERFIKIQSR-SHRSSCNKQKSSPQDVTESTKKPKEFQQYEH-------------SPEFLS 282
+R +I S+ S + S K K+S + TE + + Q EH SP ++
Sbjct: 76 KRIREIDSKTSFKESSKKAKNSRRRKTEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIK 135
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERIS-PHLVVA 340
G L YQ++GLN+L + + ILADEMGLGKT+Q+I+FL L + + I P +V+
Sbjct: 136 EGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIV 195
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
P STL NW REFA W P +NVV+ G + R I + + Y
Sbjct: 196 PKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLY-------------------- 235
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
KFDVL+TS+EMI + ++L+ +W+ ++VDE HR+KN+DS L ++ + +R+R+
Sbjct: 236 ---TAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRL 292
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEE------------QISRL 508
L+TGTPLQNNL EL+ L++FL FG ++F E F + N EE +S L
Sbjct: 293 LITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSEL 352
Query: 509 HRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ----ILTRRGG 564
H++L+P LLRRVK DV K L PK E + + ++ Q E+YK +L ++ ++ +R G
Sbjct: 353 HQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVGKREG 412
Query: 565 AQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQG 624
+ L+N+VM+LRK C HPY+ +G EP T + + L+ +SGK+ +LDKM+ K K +G
Sbjct: 413 -KTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD--EHLVYNSGKMIILDKMLKKFKAEG 469
Query: 625 HRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLST 684
RVLI+SQ +LD+LEDY F+ ++Y RIDG +R ID +NA +S +F FLL+T
Sbjct: 470 SRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTT 529
Query: 685 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQ 744
RAGGLGINL +AD VI+YDSDWNP ADLQAM RAHR+GQ +V +FR +T +IEE++++
Sbjct: 530 RAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLE 589
Query: 745 MTKKKMVLEHLVVGRLKAQNIN 766
+K+ L+ LV+ + + N N
Sbjct: 590 RAAQKLRLDQLVIQQGRQMNSN 611
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 233/562 (41%), Positives = 342/562 (60%)
Query: 237 ERFIKIQSR-SHRSSCNKQKSSPQDVTESTKKPKEFQQYEH-------------SPEFLS 282
+R +I S+ S + S K K+S + TE + + Q EH SP ++
Sbjct: 76 KRIREIDSKTSFKESSKKAKNSRRRKTEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIK 135
Query: 283 GGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERIS-PHLVVA 340
G L YQ++GLN+L + + ILADEMGLGKT+Q+I+FL L + + I P +V+
Sbjct: 136 EGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIV 195
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
P STL NW REFA W P +NVV+ G + R I + + Y
Sbjct: 196 PKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLY-------------------- 235
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
KFDVL+TS+EMI + ++L+ +W+ ++VDE HR+KN+DS L ++ + +R+R+
Sbjct: 236 ---TAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRL 292
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEE------------QISRL 508
L+TGTPLQNNL EL+ L++FL FG ++F E F + N EE +S L
Sbjct: 293 LITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQDKAVSEL 352
Query: 509 HRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ----ILTRRGG 564
H++L+P LLRRVK DV K L PK E + + ++ Q E+YK +L ++ ++ +R G
Sbjct: 353 HQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVVGKREG 412
Query: 565 AQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQG 624
+ L+N+VM+LRK C HPY+ +G EP T + + L+ +SGK+ +LDKM+ K K +G
Sbjct: 413 -KTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTD--EHLVYNSGKMIILDKMLKKFKAEG 469
Query: 625 HRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLST 684
RVLI+SQ +LD+LEDY F+ ++Y RIDG +R ID +NA +S +F FLL+T
Sbjct: 470 SRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTT 529
Query: 685 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQ 744
RAGGLGINL +AD VI+YDSDWNP ADLQAM RAHR+GQ +V +FR +T +IEE++++
Sbjct: 530 RAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLE 589
Query: 745 MTKKKMVLEHLVVGRLKAQNIN 766
+K+ L+ LV+ + + N N
Sbjct: 590 RAAQKLRLDQLVIQQGRQMNSN 611
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 226/552 (40%), Positives = 333/552 (60%)
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNF 296
+ I + HR + +Q+ + ++ES K ++E SP ++ GG L YQ+ GLN+
Sbjct: 116 QSLISVGDYRHRRT--EQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNW 173
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREFAT 354
L + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL NW EF
Sbjct: 174 LISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKR 233
Query: 355 WAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSY 414
W P + V+ +VG R E P ++DV +TSY
Sbjct: 234 WVPSLRVICFVGDKDVRAAFIRDEM-MPG----------------------EWDVCVTSY 270
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGTPLQNNL EL
Sbjct: 271 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 330
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKKDVMKELPPK 531
+ L++FL F S ++F F N ++ + RLH +L P LLRR+K DV K LPPK
Sbjct: 331 WALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPK 390
Query: 532 KELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYMLEGVE 590
KE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C HPY+ +G E
Sbjct: 391 KEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAE 450
Query: 591 PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
P T + + ++ +SGK+ LDK++ ++KEQG RVLI+SQ +LD+LEDY ++ ++
Sbjct: 451 PGPPYTTD--EHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYE 508
Query: 651 YERIDGKVGGAERQI------------RIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
Y R+DG+ ER+ I+ FNA NSS+F F+LSTRAGGLGINLA+AD
Sbjct: 509 YCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADV 568
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV- 757
VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+
Sbjct: 569 VILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQ 628
Query: 758 -GRLKAQNINQV 768
GRL Q N++
Sbjct: 629 QGRLIDQQSNKL 640
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 850 (304.3 bits), Expect = 4.4e-100, Sum P(2) = 4.4e-100
Identities = 167/369 (45%), Positives = 255/369 (69%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
FDVLLT+YE++ D ++L I W +++DE HR+KN+ S L SS++ + +R+L+TGTP
Sbjct: 421 FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTP 480
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-------DINQEEQISRLHRMLAPHLLRR 519
L NNL EL+ L++FL F + EEF F D Q E I++LH +L P +LRR
Sbjct: 481 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 540
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKL 579
+K +V + LPPK+E+ + V +S QK+ Y IL++N +L G++ ++N++M+LRK
Sbjct: 541 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKC 600
Query: 580 CCHPYMLEGVE--PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHML 637
C HPY+ +G+E P IE + L+E+SGK+ LLDK++ +LK++ RVL++SQ +L
Sbjct: 601 CNHPYLFDGIEEPPYIEGNH-----LIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLL 655
Query: 638 DLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATAD 697
D+++DY +K + Y RIDG G ERQ+RI++FN NS F FLLSTRAGG+GINL TAD
Sbjct: 656 DIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTAD 715
Query: 698 TVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
VI++DSD+NP D+QAM RAHR+GQ +V+++R +T+ S+EE++++ KK+ L+ L++
Sbjct: 716 IVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 775
Query: 758 GRLKAQNIN 766
+ K N+N
Sbjct: 776 QKGKL-NLN 783
Score = 180 (68.4 bits), Expect = 4.4e-100, Sum P(2) = 4.4e-100
Identities = 39/90 (43%), Positives = 52/90 (57%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERISPH-LVVAP 341
G++ PYQLEGLN+L + + + ILADEMGLGKT+Q+I+ L L F + I +++ P
Sbjct: 320 GTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICP 379
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
STL NW E W M Y G R
Sbjct: 380 RSTLDNWYEEIKKWCTPMKAFKYYGNKDQR 409
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 850 (304.3 bits), Expect = 4.4e-100, Sum P(2) = 4.4e-100
Identities = 167/369 (45%), Positives = 255/369 (69%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
FDVLLT+YE++ D ++L I W +++DE HR+KN+ S L SS++ + +R+L+TGTP
Sbjct: 421 FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTP 480
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-------DINQEEQISRLHRMLAPHLLRR 519
L NNL EL+ L++FL F + EEF F D Q E I++LH +L P +LRR
Sbjct: 481 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 540
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKL 579
+K +V + LPPK+E+ + V +S QK+ Y IL++N +L G++ ++N++M+LRK
Sbjct: 541 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQMLNILMQLRKC 600
Query: 580 CCHPYMLEGVE--PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHML 637
C HPY+ +G+E P IE + L+E+SGK+ LLDK++ +LK++ RVL++SQ +L
Sbjct: 601 CNHPYLFDGIEEPPYIEGNH-----LIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLL 655
Query: 638 DLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATAD 697
D+++DY +K + Y RIDG G ERQ+RI++FN NS F FLLSTRAGG+GINL TAD
Sbjct: 656 DIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTAD 715
Query: 698 TVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
VI++DSD+NP D+QAM RAHR+GQ +V+++R +T+ S+EE++++ KK+ L+ L++
Sbjct: 716 IVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 775
Query: 758 GRLKAQNIN 766
+ K N+N
Sbjct: 776 QKGKL-NLN 783
Score = 180 (68.4 bits), Expect = 4.4e-100, Sum P(2) = 4.4e-100
Identities = 39/90 (43%), Positives = 52/90 (57%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERISPH-LVVAP 341
G++ PYQLEGLN+L + + + ILADEMGLGKT+Q+I+ L L F + I +++ P
Sbjct: 320 GTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICP 379
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
STL NW E W M Y G R
Sbjct: 380 RSTLDNWYEEIKKWCTPMKAFKYYGNKDQR 409
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 813 (291.2 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 169/355 (47%), Positives = 232/355 (65%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+F VLLT+YEM D+ LK KW+ ++VDE HRLKN++S L +LK+++ RVLLTGT
Sbjct: 134 RFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGT 193
Query: 466 PLQNNLDELFMLMHFLDAGKF--GSLEEFQEEFKDINQEEQ-ISRLHRMLAPHLLRRVKK 522
P+QNNL E++ L+ F+ F ++E+F + DI E + LH++L P LLRRVK
Sbjct: 194 PIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKA 253
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCH 582
+V ELP K EL++ LS+ QK YYKAIL R+ + L+NV+M+LRK H
Sbjct: 254 EVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRLLNVLMQLRKCVDH 313
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +GVEP+ + E L+E+SGKL LLD M+ L+E GH VL++SQ MLD+L+D
Sbjct: 314 PYLFDGVEPEPFEMGE---HLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQD 370
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
YL ++ + YER+DG V G ER + I F+ K+ F FLLST+AGG+G+NL ADTVI
Sbjct: 371 YLEYRGYSYERLDGSVRGEERNLAIKNFSTKDV--FIFLLSTKAGGVGMNLTAADTVIFV 428
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
D D+NP DLQA ARAHR+GQT V + RL+ R +IEE + K+ L V+
Sbjct: 429 DGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVI 483
Score = 182 (69.1 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 38/92 (41%), Positives = 56/92 (60%)
Query: 284 GSLH--PYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE-RIS-PHLVV 339
G++H PYQL+G+ +L Q IL DEMGLGKT Q+I+ LA G +++ P LV+
Sbjct: 31 GAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVL 90
Query: 340 APLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
PL+ L NW +E + P ++V+ Y G + R
Sbjct: 91 CPLAVLENWRQELERFCPSLSVICYTGDKEKR 122
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 217/534 (40%), Positives = 326/534 (61%)
Query: 246 SHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQT 305
S+R +Q+ + ++ES K ++E SP ++ GG L YQ+ GLN+L +
Sbjct: 155 SYRHRRTEQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGV 214
Query: 306 HVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYV 365
+ ILADEMGLGKT+Q+IA L L H RN P ++V+ V
Sbjct: 215 NGILADEMGLGKTLQTIALLGYL------KHY--------RN--------IPGPHMVL-V 251
Query: 366 GTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI--KFDVLLTSYEMINLDSAS 423
S N + E++ + P + + ++DV +TSYEM+ + +
Sbjct: 252 PKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSV 311
Query: 424 LKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDA 483
K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGTPLQNNL EL+ L++FL
Sbjct: 312 FKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLP 371
Query: 484 GKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVEL 540
F S ++F F N ++ + RLH +L P LLRR+K DV K LPPKKE+ + + L
Sbjct: 372 DVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGL 431
Query: 541 SSKQKEY-YKAILTRNYQILTRRGGA-QISLINVVMELRKLCCHPYMLEGVEPDIEDTNE 598
S Q+E+ Y IL ++ +L G ++ L+N++M+LRK C HPY+ +G EP T +
Sbjct: 432 SKMQREWWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD 491
Query: 599 SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKV 658
+ ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LEDY ++ ++Y R+DG+
Sbjct: 492 --EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQT 549
Query: 659 GGAERQIR--IDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMA 716
ER+ + I+ FNA NSS+F F+LSTRAGGLGINLA+AD VI+YDSDWNP DLQAM
Sbjct: 550 PHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMD 609
Query: 717 RAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNINQV 768
RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GRL Q N++
Sbjct: 610 RAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKL 663
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 796 (285.3 bits), Expect = 6.0e-97, Sum P(2) = 6.0e-97
Identities = 160/355 (45%), Positives = 234/355 (65%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+F VLLT+YE+ D++ LK W ++VDE HRLKN+ S L +L ++S +LLTGT
Sbjct: 147 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 206
Query: 466 PLQNNLDELFMLMHFLDAGKFGS--LEEFQEEFKDINQE-EQISRLHRMLAPHLLRRVKK 522
P+QN+L EL+ L+ F++ F +E+F + ++DI +E E S L+++L P LLRRVK
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKA 266
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCH 582
+V ELP K E+++ +S+ QK+YYKAIL ++ ++ L NV+ +LRK H
Sbjct: 267 EVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLSQLRKCVDH 326
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +GVEP+ + + L+E+SGKL LLDK++ L +GHRVL++SQ MLD+L+D
Sbjct: 327 PYLFDGVEPEPFEIGD---HLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQD 383
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
YL ++ + YER+DG V G ER + I F + F FLLSTRAGG+G+NL ADTVI +
Sbjct: 384 YLDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FTFLLSTRAGGVGMNLTAADTVIFF 441
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DSD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L + ++
Sbjct: 442 DSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTII 496
Score = 187 (70.9 bits), Expect = 6.0e-97, Sum P(2) = 6.0e-97
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 281 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS---PHL 337
L+G L PYQL+G+N+L + Q IL DEMGLGKT Q+IA L G R++ P L
Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAG-RLNDEGPFL 101
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
++ PLS L NW+ E +AP ++ V Y G R +++
Sbjct: 102 ILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQ 140
Score = 44 (20.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
EG L+NK S L + ST+ + +L+ L++
Sbjct: 611 EGRLLRNKGSVPIPGLVEGSTKRKRILSPEELED 644
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 795 (284.9 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 162/354 (45%), Positives = 231/354 (65%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F VLLT+YE+ D++ LK W + VDE HRLKN+ S L +L ++S R+LLTGTP
Sbjct: 140 FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTP 199
Query: 467 LQNNLDELFMLMHFLDAGKF--GSLEEFQEEFKDINQEEQ-ISRLHRMLAPHLLRRVKKD 523
+QN+L EL+ L+ ++ F +E+F + ++DI +E + S LHR+L P LLRRVK
Sbjct: 200 IQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQ 259
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHP 583
V ELP K E+++ +S+ QK+YYKAIL ++ ++ L N++ +LRK HP
Sbjct: 260 VATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILTQLRKCVDHP 319
Query: 584 YMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY 643
Y+ +GVEP+ + E L+E+SGKL LLD+++ L GHRVL++SQ HMLD+L+DY
Sbjct: 320 YLFDGVEPEPFEVGE---HLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDY 376
Query: 644 LTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYD 703
+ ++ + YER+DG V G ER + I F N F FLLSTRAGG+G+NL ADTVI D
Sbjct: 377 MDYRGYSYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMNLTAADTVIFVD 434
Query: 704 SDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
SD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L ++V+
Sbjct: 435 SDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVI 488
Score = 187 (70.9 bits), Expect = 7.7e-97, Sum P(2) = 7.7e-97
Identities = 48/117 (41%), Positives = 67/117 (57%)
Query: 258 PQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGK 317
P+ + ++P + QQ+ L+G L YQLEG+N+L + Q IL DEMGLGK
Sbjct: 18 PEPLRTRVQEP-DLQQWG-----LTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGK 71
Query: 318 TIQSIAFLASLFGERIS---PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
T Q+IA L L G R++ P LV+ PLS L NW+ E +AP ++ V Y G + R
Sbjct: 72 TCQTIALLIYLVG-RLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEER 127
Score = 38 (18.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 437 GHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
G L+NK S L L + + + +L+ L++
Sbjct: 615 GRTLRNKGSVLIPGLAEGPIKRKKILSPEELED 647
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 794 (284.6 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 162/357 (45%), Positives = 236/357 (66%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F VLLT+YE+ D++ LK W ++VDE HRLKN++S L SL ++S R+LLTGTP
Sbjct: 148 FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSEFSVAFRLLLTGTP 207
Query: 467 LQNNLDELFMLMHFLDAGKFGS--LEEFQEEFKDINQE-EQISRLHRMLAPHLLRRVKKD 523
+QN+L EL+ L+ F++ F +E+F + ++DI +E E S L+++L P LLRRVK +
Sbjct: 208 IQNSLQELYSLLSFVEPDLFSKEEVEDFVQRYEDIEKESESASELYKLLQPFLLRRVKAE 267
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQI---LTRRGGAQISLINVVMELRKLC 580
V ELP K E+++ +S+ QK+YYKAIL ++ +I ++ L NV+ +LRK
Sbjct: 268 VAAELPKKTEVVIYHGMSALQKKYYKAILMKDLEISDAFENEMAKKVKLQNVLSQLRKCV 327
Query: 581 CHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLL 640
HPY+ +GVEP+ + + L+E+SGKL LLDK++ L +GHRVL++SQ MLD+L
Sbjct: 328 DHPYLFDGVEPEPFEIGD---HLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDIL 384
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
+DY+ ++ + YER+DG V G ER + I F + F FLLSTRAGG+G+NL ADTVI
Sbjct: 385 QDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FIFLLSTRAGGVGMNLTAADTVI 442
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DSD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L + ++
Sbjct: 443 FVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIICRKAASKLKLTNTII 499
Score = 183 (69.5 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 43/94 (45%), Positives = 55/94 (58%)
Query: 281 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS---PHL 337
L+G L PYQLEG+N+L + Q IL DEMGLGKT Q+IA L G R++ P L
Sbjct: 43 LTGIHLRPYQLEGVNWLAQCFHYQNGCILGDEMGLGKTCQTIAVFIYLAG-RLNDEGPFL 101
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
++ PLS L NW+ E AP + V Y G + R
Sbjct: 102 ILCPLSVLSNWKEEMERCAPGLCCVTYAGDKEER 135
Score = 50 (22.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
EG L+NK S L L + ST+ + +L+ L++
Sbjct: 614 EGRLLRNKGSVLIPGLVEGSTQRKRILSPEELED 647
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 791 (283.5 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 162/354 (45%), Positives = 231/354 (65%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F VLLT+YE+ D++ LK W + VDE HRLKN+ S L +L ++S R+LLTGTP
Sbjct: 140 FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSVVFRLLLTGTP 199
Query: 467 LQNNLDELFMLMHFLDAGKF--GSLEEFQEEFKDINQEEQ-ISRLHRMLAPHLLRRVKKD 523
+QN+L EL+ L+ ++ F +E+F + ++DI +E + S LHR+L P LLRRVK
Sbjct: 200 IQNSLQELYSLLSVVEPDLFCREQVEDFVQCYQDIEKESKSASELHRLLRPFLLRRVKAQ 259
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHP 583
V ELP K E+++ +S+ QK+YYKAIL ++ ++ L NV+ +LRK HP
Sbjct: 260 VATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNVLTQLRKCVDHP 319
Query: 584 YMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDY 643
Y+ +GVEP+ + E L+E+SGKL LLD+++ L GHRVL++SQ HMLD+L+DY
Sbjct: 320 YLFDGVEPEPFEVGE---HLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDY 376
Query: 644 LTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYD 703
+ ++ + YER+DG V G ER + I F + F FLLSTRAGG+G+NL ADTVI D
Sbjct: 377 MDYRGYSYERVDGSVRGEERHLAIKNFGKQPI--FVFLLSTRAGGVGMNLTAADTVIFVD 434
Query: 704 SDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
SD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L ++V+
Sbjct: 435 SDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVI 488
Score = 186 (70.5 bits), Expect = 2.6e-96, Sum P(2) = 2.6e-96
Identities = 43/94 (45%), Positives = 57/94 (60%)
Query: 281 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS---PHL 337
L+G L YQLEG+N+L + Q IL DEMGLGKT Q+IA L L G R++ P L
Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHGQNGCILGDEMGLGKTCQTIALLIYLVG-RLNDEGPFL 93
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
++ PLS L NW+ E +AP ++ V Y G + R
Sbjct: 94 ILCPLSVLSNWKEEMERFAPGLSCVTYTGDKEER 127
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 437 GHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
G L+NK S L L + + + +L+ L++
Sbjct: 613 GRSLRNKGSVLIPGLAEGPIKRKKILSPEELED 645
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 20/88 (22%), Positives = 38/88 (43%)
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV-VGRLKAQNINQVT 769
DL A+ A +TN + ++ ++++ KKK HL +G + N
Sbjct: 802 DLLALVVAQHRDRTNVLSGIKMAALEEGLKKILLAAKKKKASVHLPRIGHA-TKGFN--- 857
Query: 770 IFFQTWRLLS--CSVEGILELVFLWTRS 795
++ T RL+ + GI ++ + RS
Sbjct: 858 -WYGTERLIRKHLATRGIPTFIYYFPRS 884
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 789 (282.8 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 159/355 (44%), Positives = 231/355 (65%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+F VLLT+YE+ D++ LK W ++VDE HRLKN+ S L +L ++S +LLTGT
Sbjct: 145 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 204
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLE--EFQEEFKDINQE-EQISRLHRMLAPHLLRRVKK 522
P+QN+L EL+ L+ F++ F E +F + ++DI +E E S LH++L P LLRRVK
Sbjct: 205 PIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKA 264
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCH 582
+V ELP K E+++ +S+ QK+YYKAIL ++ ++ L N++ +LRK H
Sbjct: 265 EVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKKVKLQNILSQLRKCVDH 324
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +GVEP+ + + L E+SGKL LLDK++ L GHRVL++SQ MLD+L+D
Sbjct: 325 PYLFDGVEPEPFEVGD---HLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQD 381
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
Y+ ++ + YER+DG V G ER + I F + F FLLSTRAGG+G+NL ADTVI
Sbjct: 382 YMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FVFLLSTRAGGVGMNLTAADTVIFV 439
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DSD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L ++++
Sbjct: 440 DSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMII 494
Score = 187 (70.9 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 45/118 (38%), Positives = 65/118 (55%)
Query: 262 TESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQS 321
TE + Q+ + L+G L YQLEG+N+L + Q IL DEMGLGKT Q+
Sbjct: 22 TEGRAEAARVQEQDLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQT 81
Query: 322 IAFLASLFGERIS---PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
IA L G R++ P L++ PLS L NW+ E +AP ++ V Y G + R +++
Sbjct: 82 IALFIYLAG-RLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ 138
Score = 51 (23.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
EG L+NK S L L + ST+ + +L+ L++
Sbjct: 609 EGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELED 642
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 934 (333.8 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 216/499 (43%), Positives = 299/499 (59%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SP 335
P L GG L YQLEGL ++ ++ + ILADEMGLGKTIQ+IA +A L + P
Sbjct: 378 PSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGP 437
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
HL++AP + L NWE EFA WAP ++ +Y G+ + R IR
Sbjct: 438 HLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRA------------------- 478
Query: 396 XXXXXXQDRI---KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK 452
RI KF+VL+T Y++I D A LK I W MIVDEGHRLKN + L +L
Sbjct: 479 --------RIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLG 530
Query: 453 Q-YSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---------DINQE 502
Y + R+LLTGTP+QN+L EL+ L++FL F S+ F+E F + E
Sbjct: 531 TGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDE 590
Query: 503 EQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQIL 559
E+ I+RLH ++ P LLRR K +V K LP K ++IL+ ++S+ QK YYK + L
Sbjct: 591 EELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGL 650
Query: 560 TRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFK-QLLESSGKLQLLDKMMV 618
G SL N+ M+LRK C HPY+ G D N K +++ +SGK +LLD+++
Sbjct: 651 HSGNGKSKSLQNLTMQLRKCCNHPYLFVGA-----DYNMCKKPEIVRASGKFELLDRLLP 705
Query: 619 KLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRF 678
KLK+ GHR+L++SQ ++DLLE YL+ + Y R+DG +R I + +FN +S F
Sbjct: 706 KLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYF 765
Query: 679 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSI 738
FLLSTRAGGLG+NL TADT+II+DSDWNP D QA RAHR+GQ +V +F L++ GSI
Sbjct: 766 MFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSI 825
Query: 739 EERMMQMTKKKMVLEHLVV 757
EE +++ K+KM ++ V+
Sbjct: 826 EEVILERAKQKMGIDAKVI 844
Score = 37 (18.1 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 201 RGEDDEKEYLVKYKELSYDECYWEYESDISA 231
RGED +++ L++ L E ++SA
Sbjct: 117 RGEDLQEKCLLELYGLKLQELQCRVRGEVSA 147
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 782 (280.3 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 159/355 (44%), Positives = 233/355 (65%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+F VLLT+YE+ D++ LK W ++VDE HRLKN+ S L +L ++S +LLTGT
Sbjct: 147 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 206
Query: 466 PLQNNLDELFMLMHFLDAGKFGS--LEEFQEEFKDINQE-EQISRLHRMLAPHLLRRVKK 522
P+QN+L EL+ L+ F++ F +E+F + ++DI +E E S L+++L P LLRRVK
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKA 266
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCH 582
+V ELP K E+++ +S+ QK+YYKAIL ++ ++ L NV+ +LRK H
Sbjct: 267 EVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENEMAKKVKLQNVLSQLRKCVDH 326
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +GVEP+ + + L+E+SGKL LLDK++ L +GHRVL++SQ MLD+L+D
Sbjct: 327 PYLFDGVEPEPFEIGD---HLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQD 383
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
YL ++ + YER+DG V G ER + I F + F FL STRAGG+G+NL ADTVI +
Sbjct: 384 YLDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FTFL-STRAGGVGMNLTAADTVIFF 440
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DSD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L + ++
Sbjct: 441 DSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNTII 495
Score = 187 (70.9 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 281 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS---PHL 337
L+G L PYQL+G+N+L + Q IL DEMGLGKT Q+IA L G R++ P L
Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAG-RLNDEGPFL 101
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
++ PLS L NW+ E +AP ++ V Y G R +++
Sbjct: 102 ILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQ 140
Score = 44 (20.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
EG L+NK S L + ST+ + +L+ L++
Sbjct: 610 EGRLLRNKGSVPIPGLVEGSTKRKRILSPEELED 643
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 931 (332.8 bits), Expect = 1.3e-93, Sum P(2) = 1.3e-93
Identities = 215/502 (42%), Positives = 304/502 (60%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--P 335
P L GG L PYQ++GL ++ ++ + + ILADEMGLGKTIQ+IA ++ L + + P
Sbjct: 1703 PALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKNNGP 1762
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
LVV PLSTL NW +EF+ WAP++ V+Y G AR E EF P
Sbjct: 1763 FLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFE-EFIAPG------------ 1809
Query: 396 XXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSL-KQY 454
+F+ ++T+YE I D +L IKW +IVDEGHR+KN SKL L Y
Sbjct: 1810 ----------QFNAVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSY 1859
Query: 455 STRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQ 504
S+R+R+LLTGTPLQN+L EL+ L++FL F +E+F++ F ++N+EEQ
Sbjct: 1860 SSRYRLLLTGTPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQ 1919
Query: 505 ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR 561
I RLH++L P LLRR+KK+V +LP K E +L+ ++S+ Q + Y I T+ L
Sbjct: 1920 LLIIQRLHKVLRPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLAS 1979
Query: 562 RGGAQIS------LINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDK 615
GGA + L N ++LRK+C HPY+ E +I+D L+ +GK LLD+
Sbjct: 1980 SGGADGNPKLAKGLKNTYVQLRKICNHPYLFYDDEYNIDDN------LIRYAGKFDLLDR 2033
Query: 616 MMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNS 675
++ KLK GHRVLI+SQ ++++LE + +K +++ R+DG ER ++ FNA NS
Sbjct: 2034 LLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNS 2093
Query: 676 SRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITR 735
F F+LSTRAGGLG+NL TADTVII+DSDWNP DLQA RAHR+GQ V + RL+T
Sbjct: 2094 EYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTA 2153
Query: 736 GSIEERMMQMTKKKMVLEHLVV 757
S+EE ++ K L+ ++
Sbjct: 2154 HSVEESILARANFKKELDKKII 2175
Score = 54 (24.1 bits), Expect = 1.3e-93, Sum P(2) = 1.3e-93
Identities = 22/81 (27%), Positives = 36/81 (44%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDV 261
G ++ + ++YK+LS E + ++ EI + S+ +S KQK Q
Sbjct: 1242 GTIEKLQETIQYKQLSLLEYQKQLRREV--LDAEISK-----SKLKKSKDLKQKLDQQQS 1294
Query: 262 TESTKKPKEF--QQYEHSPEF 280
E + K+F Q HS EF
Sbjct: 1295 NEEKNRFKDFLGQILNHSKEF 1315
Score = 43 (20.2 bits), Expect = 1.8e-92, Sum P(2) = 1.8e-92
Identities = 10/44 (22%), Positives = 25/44 (56%)
Query: 233 QPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEH 276
QP+ ++ + Q++ + +Q+ SPQ + +P++ Q ++H
Sbjct: 376 QPQQQQH-QPQTQQQQQQQQQQQQSPQQQPQQFLQPQQ-QYHQH 417
Score = 39 (18.8 bits), Expect = 4.9e-92, Sum P(2) = 4.9e-92
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 243 QSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQ 290
Q + + +Q Q ++ ++ ++ QQ + SP+ L P Q
Sbjct: 365 QQQQQQQQQQQQPQQQQHQPQTQQQQQQQQQQQQSPQQQPQQFLQPQQ 412
Score = 37 (18.1 bits), Expect = 7.9e-92, Sum P(2) = 7.9e-92
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 233 QPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQ 273
QPE + + Q++S ++ +++ PQ +E + ++ QQ
Sbjct: 1052 QPEQVQSSE-QTQSMQAQQQPEQNQPQQQSEQITQQQQSQQ 1091
Score = 37 (18.1 bits), Expect = 7.9e-92, Sum P(2) = 7.9e-92
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 233 QPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHS 277
QPE + + Q + H + PQ +S ++P++ Q E +
Sbjct: 1020 QPEHLQQQQQQQQEHLQQPENLQPQPQQ--QSQQQPEQVQSSEQT 1062
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 764 (274.0 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 159/359 (44%), Positives = 235/359 (65%)
Query: 402 QDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVL 461
+++ F VLLT+YE+ D+A LK W ++VDE HRLKN++S L+ +L + +L
Sbjct: 141 KEQSHFRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTELPVGFSLL 200
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFG--SLEEFQEEFKDINQE-EQISRLHRMLAPHLLR 518
LTGTP+QN+L EL+ L+ F++ F ++EF E ++ + +E E LH +L P LLR
Sbjct: 201 LTGTPIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQAVEKESEPAKELHNLLQPFLLR 260
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRK 578
RVK +V +LP K E++L +S+ Q++YYKAILT++ G ++ L NV+++LRK
Sbjct: 261 RVKSEVTADLPKKVEVVLYHGMSALQRKYYKAILTKDLDAFEGGTGRKVMLQNVLIQLRK 320
Query: 579 LCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLD 638
HPY+ GVEP+ + + ++E+SGKL LLDK++ L + GHRVL++SQ +LD
Sbjct: 321 CVAHPYLFNGVEPEPFEIGD---HIVEASGKLCLLDKLLSFLYDGGHRVLLFSQMTKLLD 377
Query: 639 LLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADT 698
+L+DY+ ++ + YER+DG V G ER + I F + F FLLSTRAGG+G+NL ADT
Sbjct: 378 ILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQPI--FVFLLSTRAGGVGMNLTAADT 435
Query: 699 VIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
VI DSD+NP DLQA+ARAHR+GQ V I RLI R ++EE + + K+ L + +V
Sbjct: 436 VIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLTNAIV 494
Score = 180 (68.4 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 281 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPH--LV 338
L+G L PYQL+G+N+L + Q IL DEMGLGKT Q+I+ L L + + L+
Sbjct: 41 LTGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTKKLTNKERSLI 100
Query: 339 VAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+ PLS L NW+ E +AP ++ V YVG + R
Sbjct: 101 LCPLSVLSNWKEELERFAPGLSFVTYVGNKEER 133
Score = 61 (26.5 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQ 468
EG L+NK + L + L+ STR + LL+ L+
Sbjct: 608 EGRALRNKANTLLTGLRDQSTRRKHLLSAEELE 640
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 204/483 (42%), Positives = 298/483 (61%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L PYQ++G+N+L + ILADEMGLGKT+Q+I+FL L I + P
Sbjct: 194 GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYL--RYIEK--IPGP-- 247
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
F AP+ S N +RE + P +
Sbjct: 248 --------FLVIAPK---------STLNNWLREINRWTPDVNAFILQGDKEERAELIQKK 290
Query: 404 RI--KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVL 461
+ FDV++ SYE+I + + LK I W+ +I+DE HR+KN++S L L+++++R+R+L
Sbjct: 291 LLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLL 350
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ----ISRLHRMLAPHLL 517
+TGTPLQNNL EL+ L++FL F ++F + F + EE + +LH +L P LL
Sbjct: 351 ITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLL 410
Query: 518 RRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVM 574
RR+K DV L PKKEL L V +SS QK++YK IL ++ + G++ S L+N++M
Sbjct: 411 RRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMM 470
Query: 575 ELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQ 634
+LRK C HPY+ +G EP T + + L+ ++ KLQ+LDK++ KLKE+G RVLI+SQ
Sbjct: 471 QLRKCCNHPYLFDGAEPGPPYTTD--EHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMS 528
Query: 635 HMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLA 694
+LD+LEDY F+ ++Y RIDG +R ID +NA +S +F FLL+TRAGGLGINL
Sbjct: 529 RLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT 588
Query: 695 TADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEH 754
+AD V++YDSDWNP ADLQAM RAHR+GQ +V +FRL+T S+EE++++ +K+ L+
Sbjct: 589 SADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQ 648
Query: 755 LVV 757
LV+
Sbjct: 649 LVI 651
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 211/530 (39%), Positives = 309/530 (58%)
Query: 240 IKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQ---YEHSPEFLSGGSLHPYQLEGLNF 296
+ SR HR + K++ + E + +Q+ SP F+ G L YQ++GLN+
Sbjct: 136 VSSSSRHHRKT-EKEEDAELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNW 194
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWA 356
L + ILADEMGLGKT+Q+I+FL L ++ E F
Sbjct: 195 LISLHENKLSGILADEMGLGKTLQTISFLGYL--------------RYVKQIEGPFLIIV 240
Query: 357 PQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI--KFDVLLTSY 414
P+ S N RE+ + P + +FDVL+TSY
Sbjct: 241 PK---------STLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSY 291
Query: 415 EMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDEL 474
EM+ + +LK + WQ +++DE HR+KN+ S L ++ + +++R+L+TGTPLQNNL EL
Sbjct: 292 EMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHEL 351
Query: 475 FMLMHFLDAGKFGSLEEFQEEFKDINQEEQ----ISRLHRMLAPHLLRRVKKDVMKELPP 530
+ L++FL FG E F E F+ N E+ I +LH +L P LLRRVK DV K L P
Sbjct: 352 WALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLP 411
Query: 531 KKELILRVELSSKQKEYYKAILTRNYQILTRRGG---AQISLINVVMELRKLCCHPYMLE 587
K E + V ++ Q ++YK++L ++ + G + L+N+VM+LRK C HPY+ E
Sbjct: 412 KIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE 471
Query: 588 GVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK 647
G EP T + + L+ +SGK+ +LDK++ +LKE+G RVLI+SQ +LD+LEDY F+
Sbjct: 472 GAEPGPPYTTD--EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFR 529
Query: 648 KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWN 707
++Y RIDG ER ID +N NS +F FLL+TRAGGLGINL TADTVI++DSDWN
Sbjct: 530 DFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWN 589
Query: 708 PHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
P ADLQAM RAHR+GQ +V ++R +T +IEE++++ +K+ L+ LV+
Sbjct: 590 PQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVI 639
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 177/368 (48%), Positives = 255/368 (69%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
+DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGTP
Sbjct: 1 WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTP 60
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKKD 523
LQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K D
Sbjct: 61 LQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDKKLVERLHMVLRPFLLRRIKAD 120
Query: 524 VMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCCH 582
V K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C H
Sbjct: 121 VEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNH 180
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
PY+ +G EP T + L+ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LED
Sbjct: 181 PYLFDGAEPGPPYTTDM--HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILED 238
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
Y ++ ++Y R+DG+ ERQ I+ +N NS++F F+LSTRAGGLGINLATAD VI+Y
Sbjct: 239 YCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILY 298
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRL 760
DSDWNP DLQAM RAHR+GQT V +FR IT ++EER+++ + K+ L+ +V+ GRL
Sbjct: 299 DSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRL 358
Query: 761 KAQNINQV 768
QN+N++
Sbjct: 359 VDQNLNKI 366
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 866 (309.9 bits), Expect = 5.1e-89, Sum P(2) = 5.1e-89
Identities = 200/520 (38%), Positives = 306/520 (58%)
Query: 250 SCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS---LHPYQLEGLNFLRFSWSKQTH 306
S N+ K++P + K+ F + P ++ G L YQL GLN+L SW K
Sbjct: 117 SRNQSKTTPFKDCKILKQRPRFVALKKQPFYIGGRDCLELRDYQLNGLNWLAHSWCKGNS 176
Query: 307 VILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 366
ILADEMGLGKTIQ+I+FL LF E H + P + +W Q + +
Sbjct: 177 CILADEMGLGKTIQTISFLNYLFHE----HELYGPFLLVVPLST-LTSW--QREIQTWA- 228
Query: 367 TSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKP 426
Q ++ Y R+KF++LLT+YE++ D + L
Sbjct: 229 -PQMNAVV-----YLGDITSRNMIRTHEWMHPQTK--RLKFNILLTTYEILLKDKSFLGG 280
Query: 427 IKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
+ W + +DE HRLKN DS L+ +L + + HR+L+TGTPLQN+L EL+ L+HF+ KF
Sbjct: 281 LNWVFIGIDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF 340
Query: 487 GSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKE 546
S E+F+EE +E + LH+ L P LLRRVKKDV K LP K E ILR+E+S+ QK+
Sbjct: 341 SSWEDFEEEHGK-GREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ 399
Query: 547 YYKAILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEP-DIEDTNESFKQLL 604
YYK ILTRNY+ L++ G+ +N++MEL+K C H Y+++ + + + E+ + L+
Sbjct: 400 YYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLI 459
Query: 605 ESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQ 664
SSGKL LLDK++++L+E+G+RVLI+SQ MLD+L +YL ++++ ++R+DG + G R+
Sbjct: 460 RSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRK 519
Query: 665 IRIDRFNAKNS----SRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+D FNA+ S S FC+ L+ ++ L +L + I WNP + + A +
Sbjct: 520 QALDHFNAEGSENLTSLFCYHLTRKSLTLKTHLRNGHNIDIIAFFWNPCSCINACFLSLN 579
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
+ +V I+RL+T+GS+EE +++ KKKMVL+HLV+ R+
Sbjct: 580 ILTKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRM 619
Score = 350 (128.3 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 93/263 (35%), Positives = 137/263 (52%)
Query: 141 SYLHCTWVPEKEF----LKAFKSNPRLRTKVNNFHRQMSSNN-------NAEEDFVA-IR 188
S++H TW E+ +K K + K R + + + N +++F +
Sbjct: 1 SHIHNTWESEETLKQHNVKGMKKLDNYKKKCQETKRWLKNASPEDVEYYNCQQEFTDDLH 60
Query: 189 PEWTTVDRILACRGEDDEK---EYLVKYKELSYDECYWEYESDISA-FQPEIERFIKIQS 244
++ V+RI+A + +Y K++ L Y EC WE + I+ FQ I+ + S
Sbjct: 61 KQYQVVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYF---S 117
Query: 245 RSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS---LHPYQLEGLNFLRFSW 301
R N+ K++P + K+ F + P ++ G L YQL GLN+L SW
Sbjct: 118 R------NQSKTTPFKDCKILKQRPRFVALKKQPFYIGGRDCLELRDYQLNGLNWLAHSW 171
Query: 302 SKQTHVILADEMGLGKTIQSIAFLASLFGER--ISPHLVVAPLSTLRNWEREFATWAPQM 359
K ILADEMGLGKTIQ+I+FL LF E P L+V PLSTL +W+RE TWAPQM
Sbjct: 172 CKGNSCILADEMGLGKTIQTISFLNYLFHEHELYGPFLLVVPLSTLTSWQREIQTWAPQM 231
Query: 360 NVVMYVGTSQARNIIREYEFYFP 382
N V+Y+G +RN+IR +E+ P
Sbjct: 232 NAVVYLGDITSRNMIRTHEWMHP 254
Score = 59 (25.8 bits), Expect = 5.1e-89, Sum P(2) = 5.1e-89
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 133 YLVKWKGLSYLHCTWVPEKEFLKAFKS 159
Y KW+GL Y C+W K F++
Sbjct: 84 YYCKWQGLPYSECSWEDGALIAKKFQA 110
Score = 38 (18.4 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 436 EGHRLKNKDSKLFSSLK 452
+GHR ++ S L SLK
Sbjct: 1341 DGHRSRDHKSNLEGSLK 1357
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 894 (319.8 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 209/528 (39%), Positives = 314/528 (59%)
Query: 256 SSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGL 315
+SP T + K P+ ++GG L YQ+ GL +L +++ + ILADEMGL
Sbjct: 594 TSPLQSTTTILAKKSNNLVIEQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGL 653
Query: 316 GKTIQSIAFLASLFGERIS---PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARN 372
GKT+Q+IAF++ L+ ER++ P LVVAPLST+ NW EFA W+P+++V++Y G R
Sbjct: 654 GKTVQTIAFISFLY-ERMNVREPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDER- 711
Query: 373 IIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCM 432
RE P R F V++TS+E I D +L + W +
Sbjct: 712 --RETARTIP---------------------RNAFCVVITSFEYIIKDRKTLGRVHWIYI 748
Query: 433 IVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF 492
I+DEGHR+KNK+SKL L+QY +R+R+LLTGTPLQN+L EL+ L++FL F S + F
Sbjct: 749 IIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTPLQNDLGELWALLNFLLPTIFNSADTF 808
Query: 493 QEEFK-----------DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRV 538
Q F ++N+EE I+RLH++L LLRR+K DV +LP KKE +++
Sbjct: 809 QNWFNAPFQAKGKNLINVNEEESLIIINRLHQVLRFFLLRRLKSDVESQLPDKKEKVIKC 868
Query: 539 ELSSKQKEYYKAILTRNYQILT--------RRGGAQIS-LINVVMELRKLCCHPYMLEGV 589
+S+ Q Y++++ Y +L R G ++ N+V +L+K+C HPY+ +
Sbjct: 869 NMSALQIAMYRSLV--EYGVLPIDPDSKEGRSGRLKMKGFNNIVKQLQKICNHPYLFK-- 924
Query: 590 EPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKW 649
D D NE L+ +SGK +D+++ K+ HRVLI++Q +++L+E+Y + K+W
Sbjct: 925 --DEWDINED---LIRTSGKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEW 979
Query: 650 QYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 709
+ R+DG ER + +N +S + F+LST AGGLG+NL TADTVII+DSDWNP
Sbjct: 980 TFLRLDGSTKPEERAHLVVEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQ 1039
Query: 710 ADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DLQA R HR+GQTN V +FRLI+ SIEE+++ K+ ++ ++
Sbjct: 1040 MDLQAQDRCHRIGQTNSVSVFRLISANSIEEKILGRATDKLEIDAKII 1087
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 713 (256.0 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 153/357 (42%), Positives = 223/357 (62%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+F VLLT+YE+ DS+ LK W ++VDE HRLKN++S L +L ++S +LLTGT
Sbjct: 147 RFHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRLKNQNSLLHKTLLEFSVVFSLLLTGT 206
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLE--EFQEEFKDINQE-EQISRLHRMLAPHLLRRVKK 522
P+QN+L EL+ L+ F++ F + +F + ++DI +E + S LH++L P LLRRVK
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFPKEQVGDFVQRYQDIEKESDSASELHKLLQPFLLRRVKA 266
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCH 582
+V ELP K E++L +S+ QK+YYKAIL ++ ++ L NV+ +LRK H
Sbjct: 267 EVATELPKKTEVVLYHGMSALQKKYYKAILMKDLDAFESEMAKKVKLQNVLSQLRKCVDH 326
Query: 583 PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLK--EQGHRVLIYSQFQHMLDLL 640
PY+ EG +T F LL + L+ L+ + +GHRVL++SQ MLD+L
Sbjct: 327 PYLFEG------ETVPFFLTLLFMTTPLKNLELAALSFLFLARGHRVLLFSQMTQMLDIL 380
Query: 641 EDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVI 700
+DY+ ++ + YER+DG V G ER + I F + F FLLSTRAGG+G+NL ADTVI
Sbjct: 381 QDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPV--FVFLLSTRAGGVGMNLTAADTVI 438
Query: 701 IYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DSD+NP DLQA ARAHR+GQ V + RLI R ++EE + + K+ L + ++
Sbjct: 439 FVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNAII 495
Score = 186 (70.5 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 43/94 (45%), Positives = 56/94 (59%)
Query: 281 LSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS---PHL 337
L+G L YQLEG+N+L + Q IL DEMGLGKT Q+IA L G R++ P L
Sbjct: 43 LTGIRLRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAG-RLNDEGPFL 101
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
++ PLS L NW E +AP ++ VMY G + R
Sbjct: 102 ILCPLSVLSNWTEEMERFAPGLSCVMYAGDKEER 135
Score = 51 (23.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQN 469
EG L+NK + L L + ST+ + +L+ L++
Sbjct: 610 EGRLLRNKGNVLLPGLSEESTKRKRILSPEELED 643
Score = 44 (20.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 503 EQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQK-EYYKAIL---TRNYQ 557
E+ ++ R+L+P L +K +E K++ ++ + K+K E+ K ++ + NYQ
Sbjct: 627 EESTKRKRILSPEELEDRRKK-RQEAAAKRKRLMEEKKRKKEKVEHEKKMVWWESNNYQ 684
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 586 (211.3 bits), Expect = 6.8e-87, Sum P(2) = 6.8e-87
Identities = 122/274 (44%), Positives = 178/274 (64%)
Query: 498 DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT- 553
++++EE I RLH++L P LLRR+KKDV KELP K E +++ ++S+ Q+ Y+ +L
Sbjct: 970 ELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKY 1029
Query: 554 RNYQILTRRGGAQISLI---NVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKL 610
R I + + L N +M+L+K+C HP++ E VE I T E+ + +GK
Sbjct: 1030 RRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKF 1089
Query: 611 QLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRF 670
+LLD+++ KLK GHRVLI+ Q ++D++ED+L + +Y R+DG ER + F
Sbjct: 1090 ELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLF 1149
Query: 671 NAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIF 730
NA +S CF+LSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQ N+V I
Sbjct: 1150 NAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1209
Query: 731 RLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
RLIT S+EE +++ KK+ ++ V+ K N
Sbjct: 1210 RLITTNSVEEVILERAYKKLDIDGKVIQAGKFDN 1243
Score = 342 (125.4 bits), Expect = 6.8e-87, Sum P(2) = 6.8e-87
Identities = 115/420 (27%), Positives = 206/420 (49%)
Query: 158 KSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS 217
K N RL+ HR ++++ N E D R E +R+ A + D+E Y +K + +
Sbjct: 622 KKNKRLKFG----HRLIATHTNLERDEQK-RAEKKAKERLQALKANDEEA-Y-IKLLDQT 674
Query: 218 YDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ-KSSPQDVTESTKKPK-EFQQYE 275
D +AF + R +K Q + + + K + ++V + + PK + ++Y+
Sbjct: 675 KDTRITHLLRQTNAFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYD 734
Query: 276 HSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISP 335
+ ++ Y + + ++ KQ +++ + I+ + ++ SLF ++
Sbjct: 735 DDDD---NSNVDYYNVA--HRIKEDIKKQPSILVGGTLK-DYQIKGLQWMVSLFNNHLNG 788
Query: 336 HLVVAPLSTLRNWER-EFATWAPQM-NV----VMYVGTSQARNIIREYEFYFPXXXXXXX 389
++ + + + T+ +M N+ ++ V S N E+ + P
Sbjct: 789 -ILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISF 847
Query: 390 XXXXXXXXXXXXQDRI-KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLF 448
+ R +FDV+LT++E I + A L +KW MI+DEGHR+KN SKL
Sbjct: 848 KGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLS 907
Query: 449 SSLK-QYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK---------- 497
+L Y +R++LTGTPLQNNL EL+ L++F+ F S++ F E F
Sbjct: 908 LTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQD 967
Query: 498 --DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 552
++++EE I RLH++L P LLRR+KKDV KELP K E +++ ++S+ Q+ Y+ +L
Sbjct: 968 KIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQML 1027
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 507 (183.5 bits), Expect = 2.5e-86, Sum P(2) = 2.5e-86
Identities = 143/410 (34%), Positives = 212/410 (51%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVT 262
ED + +Y + E Y +++ F E + SR S +
Sbjct: 441 EDYDSDYYKSQALKNAKEAYQIHQARTRLFDEEAK-----DSRCASLHAASMSGSGFGES 495
Query: 263 ESTKKPKEFQQYEHSPE-FLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQS 321
S P Q E P+ + G L YQL+G+N+L + + + ILADEMGLGKT+QS
Sbjct: 496 YSLSNPS-IQAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQS 554
Query: 322 IAFLASLFG-ERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEF 379
IA LA L E I P L+++P STL NW +EF+ + P+ V+ Y G R +IR++
Sbjct: 555 IALLAHLAERENIWGPFLIISPASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKF-- 612
Query: 380 YFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHR 439
Q+ F V++TSY+++ D + +KWQ M++DE
Sbjct: 613 --------------WSQKTLYTQNA-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQA 657
Query: 440 LKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KD 498
LK+ S + L Q+ R+R+LLTGTP+QN + EL+ L+HF+ F S EEF E F KD
Sbjct: 658 LKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKD 717
Query: 499 INQ---------EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
I E Q+SRLH +L P +LRR+KKDV EL K E++ +L+S+Q+ Y+
Sbjct: 718 IESHAENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQ 777
Query: 550 AILTR-NYQILTRR--GGAQ------ISLINVVMELRKLCCHPYMLEGVE 590
A+ + + + L + G AQ SL+N+VM+ RK+C HP + E E
Sbjct: 778 ALKNKISIEDLLQSSMGSAQQAHSTTSSLMNLVMQFRKVCNHPDLFERQE 827
Score = 441 (160.3 bits), Expect = 2.5e-86, Sum P(2) = 2.5e-86
Identities = 87/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1125 ESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1184
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F ++ F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1185 SERRDMVADFQSRTDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1243
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1244 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1290
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 656 (236.0 bits), Expect = 2.1e-85, Sum P(2) = 2.1e-85
Identities = 137/321 (42%), Positives = 203/321 (63%)
Query: 454 YSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEE 503
+ +HR+LLTGTPLQN L EL+ L++FL F S F++ F ++NQEE
Sbjct: 680 FHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEE 739
Query: 504 Q---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILT 560
I RLH++L P LLRR+KK+V +LP K E +++ + S+ QK Y+ + + +
Sbjct: 740 TMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRH-MQKGLLLDA 798
Query: 561 RRGGAQISLINVVMELRKLCCHPYMLEGVEPDIE---DTNE-SFKQLLESSGKLQLLDKM 616
+ SL+N V+ LRKLC HP++ +E NE + L+ +GKL+LLD++
Sbjct: 799 KMSSGARSLMNTVVHLRKLCNHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLELLDRI 858
Query: 617 MVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSS 676
+ KLK GHR+L++ Q M+++ ED+L F+++ Y R+DG ER + +FNA NS
Sbjct: 859 LPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSD 918
Query: 677 RFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRG 736
F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA RAHR+GQ +V + RLIT
Sbjct: 919 LFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITAN 978
Query: 737 SIEERMMQMTKKKMVLEHLVV 757
S+EE+++ + K+ ++ V+
Sbjct: 979 SVEEKILAAARYKLNVDEKVI 999
Score = 367 (134.2 bits), Expect = 1.4e-49, Sum P(2) = 1.4e-49
Identities = 86/216 (39%), Positives = 131/216 (60%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQY-STRHRVLLTGT 465
F+VL+T+YE + + A L I+W+ MI+DEGHRLKN + KL L + +HR+LLTGT
Sbjct: 632 FNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGT 691
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQ---ISRLHRML 512
PLQN L EL+ L++FL F S F++ F ++NQEE I RLH++L
Sbjct: 692 PLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVL 751
Query: 513 APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINV 572
P LLRR+KK+V +LP K E +++ + S+ QK Y+ + + + + SL+N
Sbjct: 752 RPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRH-MQKGLLLDAKMSSGARSLMNT 810
Query: 573 VMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSG 608
V+ LRKLC HP++ P+IED+ ++ ++ E +G
Sbjct: 811 VVHLRKLCNHPFLF----PNIEDSCRAYWKVNEVNG 842
Score = 241 (89.9 bits), Expect = 2.1e-85, Sum P(2) = 2.1e-85
Identities = 65/197 (32%), Positives = 100/197 (50%)
Query: 182 EDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIK 241
E ++ PE+ V R E++E+E E D+ Y + + A + I
Sbjct: 432 EFWLETHPEYEIVPRDQLSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKA------KMIL 485
Query: 242 IQSRSHRSSCN-KQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS----LHPYQLEGLNF 296
++R+ + K K D + K KE +H+ + GG L PYQ++GL +
Sbjct: 486 EKARNEEDEYDQKTKKQMADYYATAHKIKEKVVKQHTT--MGGGDPNLLLKPYQIKGLEW 543
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG--ERISPHLVVAPLSTLRNWEREFAT 354
+ ++ + ILADEMGLGKTIQ+I+ + L + P+LV+ PLSTL NW+ EFA
Sbjct: 544 MVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNEFAK 603
Query: 355 WAPQMNVVMYVGTSQAR 371
WAP + ++Y GT AR
Sbjct: 604 WAPSVTTIIYKGTKDAR 620
Score = 45 (20.9 bits), Expect = 9.8e-65, Sum P(2) = 9.8e-65
Identities = 19/72 (26%), Positives = 31/72 (43%)
Query: 173 QMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYK--ELSYDECYWEYESDIS 230
Q+S + EE+ + PE D+ E K L K + E YD+ + +D
Sbjct: 448 QLSDDEEEEEEEAPVEPEEEKDDQYAGMDEETKAKMILEKARNEEDEYDQKTKKQMADYY 507
Query: 231 AFQPEI-ERFIK 241
A +I E+ +K
Sbjct: 508 ATAHKIKEKVVK 519
Score = 45 (20.9 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 523 DVMKELPPKKELILRVELSSKQKEY---YKAILTRNYQILTRRGGAQISLIN 571
DV + LP +KEL ++ SK ++ K I T Y ++ L+N
Sbjct: 1206 DVFQTLPTRKELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVN 1257
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 522 (188.8 bits), Expect = 7.5e-85, Sum P(3) = 7.5e-85
Identities = 113/280 (40%), Positives = 177/280 (63%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
FD+ +T+++++ + + L I W ++VDEGHR+KN S+ L ++ +++R+LLTGTP
Sbjct: 984 FDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTP 1043
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEF-------KD----INQEEQ---ISRLHRML 512
LQNNL EL+ L++FL F S +F++ F KD I +EEQ I+RLH +L
Sbjct: 1044 LQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVL 1103
Query: 513 APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLI-N 571
P +LRRVKKDV+K LP K E + +ELS QK YK I T+ ++ + G + N
Sbjct: 1104 LPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHNGSITTKIFQN 1163
Query: 572 VVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYS 631
+VM+LRK+ HPY+ + D N + +++ SGK ++LD+M+ KL + H+VLI+S
Sbjct: 1164 IVMQLRKIVNHPYLF------LYDYNID-ENIIKCSGKFEVLDRMLPKLLKFKHKVLIFS 1216
Query: 632 QFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFN 671
Q ++++L DYL F+ ++Y R+DG +G ER+ ID+FN
Sbjct: 1217 QMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 240 (89.5 bits), Expect = 7.5e-85, Sum P(3) = 7.5e-85
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 664 QIRIDR-FNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
QI D+ N N F+LSTR+G LG+NL TADTVII+DSD+NPH D+QAM R HR+G
Sbjct: 1389 QIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIG 1448
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N V +FR IT +EE + + + K+ + V+
Sbjct: 1449 QKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVI 1483
Score = 220 (82.5 bits), Expect = 7.5e-85, Sum P(3) = 7.5e-85
Identities = 49/100 (49%), Positives = 60/100 (60%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL--FGERIS- 334
P L GG L YQLEGL +L ++ H ILADEMGLGKTIQ+I+ A L F I+
Sbjct: 876 PSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNINV 935
Query: 335 PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNII 374
+L++ PLSTL NW EF W P +NV+ Y G R I
Sbjct: 936 KNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHI 975
Score = 43 (20.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 25/113 (22%), Positives = 53/113 (46%)
Query: 434 VDEGHRLKNKDSKLFSSLKQYSTR--HRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 491
+++ ++K+++ LK+ + ++L+ L N DEL + + D
Sbjct: 1763 INDKMQVKDEEDYYGFILKEENQNDIEKILIKSNKLINK-DELPAYLFYDDTNDSPDKIN 1821
Query: 492 FQEEFKDIN----QEEQIS-----RLHRMLAPHLLRRVKKDVMKELPPKKELI 535
+ K IN QEE+++ +L +P+LL V+KD+ + KK+++
Sbjct: 1822 LKRSRKVININLMQEEKLTEKQFLKLIDSSSPNLLSSVEKDLGRN---KKDIV 1871
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 522 (188.8 bits), Expect = 7.5e-85, Sum P(3) = 7.5e-85
Identities = 113/280 (40%), Positives = 177/280 (63%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
FD+ +T+++++ + + L I W ++VDEGHR+KN S+ L ++ +++R+LLTGTP
Sbjct: 984 FDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGTP 1043
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEF-------KD----INQEEQ---ISRLHRML 512
LQNNL EL+ L++FL F S +F++ F KD I +EEQ I+RLH +L
Sbjct: 1044 LQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHSVL 1103
Query: 513 APHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLI-N 571
P +LRRVKKDV+K LP K E + +ELS QK YK I T+ ++ + G + N
Sbjct: 1104 LPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGFKQVNHNGSITTKIFQN 1163
Query: 572 VVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYS 631
+VM+LRK+ HPY+ + D N + +++ SGK ++LD+M+ KL + H+VLI+S
Sbjct: 1164 IVMQLRKIVNHPYLF------LYDYNID-ENIIKCSGKFEVLDRMLPKLLKFKHKVLIFS 1216
Query: 632 QFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFN 671
Q ++++L DYL F+ ++Y R+DG +G ER+ ID+FN
Sbjct: 1217 QMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFN 1256
Score = 240 (89.5 bits), Expect = 7.5e-85, Sum P(3) = 7.5e-85
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 664 QIRIDR-FNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
QI D+ N N F+LSTR+G LG+NL TADTVII+DSD+NPH D+QAM R HR+G
Sbjct: 1389 QIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIG 1448
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N V +FR IT +EE + + + K+ + V+
Sbjct: 1449 QKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVI 1483
Score = 220 (82.5 bits), Expect = 7.5e-85, Sum P(3) = 7.5e-85
Identities = 49/100 (49%), Positives = 60/100 (60%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL--FGERIS- 334
P L GG L YQLEGL +L ++ H ILADEMGLGKTIQ+I+ A L F I+
Sbjct: 876 PSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLKEFKNNINV 935
Query: 335 PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNII 374
+L++ PLSTL NW EF W P +NV+ Y G R I
Sbjct: 936 KNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHI 975
Score = 43 (20.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 25/113 (22%), Positives = 53/113 (46%)
Query: 434 VDEGHRLKNKDSKLFSSLKQYSTR--HRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 491
+++ ++K+++ LK+ + ++L+ L N DEL + + D
Sbjct: 1763 INDKMQVKDEEDYYGFILKEENQNDIEKILIKSNKLINK-DELPAYLFYDDTNDSPDKIN 1821
Query: 492 FQEEFKDIN----QEEQIS-----RLHRMLAPHLLRRVKKDVMKELPPKKELI 535
+ K IN QEE+++ +L +P+LL V+KD+ + KK+++
Sbjct: 1822 LKRSRKVININLMQEEKLTEKQFLKLIDSSSPNLLSSVEKDLGRN---KKDIV 1871
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 504 (182.5 bits), Expect = 3.3e-83, Sum P(2) = 3.3e-83
Identities = 142/401 (35%), Positives = 213/401 (53%)
Query: 215 ELSYDECYWEYESDIS--AFQPEIERFIKIQSRSHRSSCNKQKS---SPQDVTEST---K 266
E+++D + E DI A + E K + S N+Q+S S D+ E +
Sbjct: 766 EINFDS---DEEEDIRRLAVESAQEAVQKAREHSQLFDANRQQSPNNSSSDMNEGEMNFQ 822
Query: 267 KPKEFQQYE-HSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFL 325
P +E P+ L L YQL+GLN+L + + + ILADEMGLGKT+QSI+ +
Sbjct: 823 NPTLVNAFEVKQPKMLMC-KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVM 881
Query: 326 ASLFG-ERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPX 383
A L I P LV+AP STL NW++E + P++ + Y G+++ R I+R++
Sbjct: 882 AYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKF------ 935
Query: 384 XXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNK 443
+ F V++TSY+++ LD+ + +KWQ MI+DE +K+
Sbjct: 936 ----------WCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSS 985
Query: 444 DSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ- 501
S + SL + R+R+LLTGTP+QN + EL+ L+HF+ F S EF E F KDI
Sbjct: 986 SSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESH 1045
Query: 502 --------EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT 553
E+Q+ RLH +L P +LRRVKK+V EL K E + +L+ +QK Y+A L
Sbjct: 1046 AQSNTQLNEQQLKRLHMILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQA-LR 1104
Query: 554 RNYQI--LTRR---GGAQI--SLINVVMELRKLCCHPYMLE 587
R I L + GG S++N+VM+ RK+C HP + E
Sbjct: 1105 RQISIAELLEKAILGGDDTVASIMNLVMQFRKVCNHPDLFE 1145
Score = 415 (151.1 bits), Expect = 3.3e-83, Sum P(2) = 3.3e-83
Identities = 84/185 (45%), Positives = 123/185 (66%)
Query: 599 SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKV 658
S + + SGKL LDK++V+LK HRVLIY Q M+DL+E+YLTF++++Y R+DG
Sbjct: 1420 SMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSS 1479
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
++R+ + + + F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RA
Sbjct: 1480 KISQRRDMVTEWQTR-PELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRA 1538
Query: 719 HRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQVTIFFQTWRLL 778
HR+GQ +V ++R ITRG+IEER++ K+K ++ +V+ + + Q+ + + ++
Sbjct: 1539 HRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGETRPTKQMDLKGNSREMV 1598
Query: 779 SCSVE 783
S +E
Sbjct: 1599 SWLLE 1603
Score = 44 (20.5 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 511 MLAPHLLRRVKKDVMKELPPKKEL 534
++AP + R+ + +++ LPP ++L
Sbjct: 248 VMAPSIDARLSQTILRGLPPAQKL 271
Score = 40 (19.1 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 609 KLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
K+ LL K + K+ G S F H+ +LE+
Sbjct: 1292 KMLLLPKSITKVDVLGSDFKEDSPFYHLTHVLEE 1325
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 568 (205.0 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 932 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 991
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 992 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1051
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1052 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1111
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1112 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1171
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1172 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1206
Score = 307 (113.1 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 97/318 (30%), Positives = 156/318 (49%)
Query: 252 NKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILAD 311
N ++ S +D + + K+ E+S ++ + GS Y + R KQ+ +++
Sbjct: 672 NSKEVSEKDARQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVE--KQSALLING 729
Query: 312 EMGLGKTIQSIAFLASLFGERISPHLV--VAPLSTLRNWER-EFATWAPQMN--VVMYVG 366
+ + +Q + ++ SL+ ++ L + P T++ + +N ++ V
Sbjct: 730 TLKHYQ-LQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYLMEHKGLNGPYLIIVP 788
Query: 367 TSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI-KFDVLLTSYEMINLDSASLK 425
S N E++ + P Q R KF+ LLT+YE I D L
Sbjct: 789 LSTLSNWTYEFDKWAPSAVKISYKGTPAMRRSLVPQLRSGKFNALLTTYEYIIKDKHILA 848
Query: 426 PIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTGTPLQNNLDELFMLMHFLDAG 484
I+W+ MIVDEGHR+KN KL L Y R+LLTGTPLQN L EL+ L++FL
Sbjct: 849 KIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPT 908
Query: 485 KFGSLEEFQEEFK----------DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPK 531
F S F++ F D+N+EE I RLH++L P LLRR+KK+V +LP K
Sbjct: 909 IFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK 968
Query: 532 KELILRVELSSKQKEYYK 549
E +++ ++S+ QK Y+
Sbjct: 969 VEYVIKCDMSALQKILYR 986
Score = 48 (22.0 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTK-KPKEFQQYEHSPEFL 281
P I++ + Q + + +Q PQ + T+ +P++ QQ + P L
Sbjct: 213 PGIQQQQQQQQQQQQQQQQQQPQQPQQPQQQTQAQPQQQQQQQQQPPTL 261
Score = 42 (19.8 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1325 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1352
Score = 39 (18.8 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1428 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1458
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 569 (205.4 bits), Expect = 1.6e-80, Sum P(3) = 1.6e-80
Identities = 117/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 899 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 958
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 959 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1018
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1019 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1078
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1079 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIG 1138
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1139 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1173
Score = 306 (112.8 bits), Expect = 1.6e-80, Sum P(3) = 1.6e-80
Identities = 99/320 (30%), Positives = 159/320 (49%)
Query: 252 NKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILAD 311
N ++ S +D + + K+ E+S ++ + GS Y + R KQ+ +++
Sbjct: 639 NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVE--KQSSLLING 696
Query: 312 EMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFA--TWAPQ---MN--VVMY 364
+ + +Q + ++ SL+ ++ ++A L + A T+ + +N ++
Sbjct: 697 TLKHYQ-LQGLEWMVSLYNNNLNG--ILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 753
Query: 365 VGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI-KFDVLLTSYEMINLDSAS 423
V S N E++ + P Q R KF+VLLT+YE I D
Sbjct: 754 VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHI 813
Query: 424 LKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTGTPLQNNLDELFMLMHFLD 482
L I+W+ MIVDEGHR+KN KL L Y R+LLTGTPLQN L EL+ L++FL
Sbjct: 814 LAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLL 873
Query: 483 AGKFGSLEEFQEEFK----------DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELP 529
F S F++ F D+N+EE I RLH++L P LLRR+KK+V +LP
Sbjct: 874 PTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP 933
Query: 530 PKKELILRVELSSKQKEYYK 549
K E +++ ++S+ QK Y+
Sbjct: 934 EKVEYVIKCDMSALQKILYR 953
Score = 45 (20.9 bits), Expect = 1.6e-80, Sum P(3) = 1.6e-80
Identities = 21/108 (19%), Positives = 42/108 (38%)
Query: 161 PRLRTKVN---NFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELS 217
P LRTK R ++ ++ VA TT++ L + E+E + K
Sbjct: 364 PDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKIEQERKRRQKHQE 423
Query: 218 YDECYWEYESDISAFQP----EIERFIKIQSRSHRSSCNKQKSSPQDV 261
Y ++ D + +I++ K + H ++ +QK + +
Sbjct: 424 YLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI 471
Score = 42 (19.8 bits), Expect = 9.9e-22, Sum P(3) = 9.9e-22
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1292 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1319
Score = 39 (18.8 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1377 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1407
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 493 (178.6 bits), Expect = 1.7e-80, Sum P(3) = 1.7e-80
Identities = 132/370 (35%), Positives = 195/370 (52%)
Query: 241 KIQSRSHR-SSCNKQKSSPQDVTE-STKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLR 298
K Q R+ NK D +E + + P E S + L YQL+GLN+L
Sbjct: 751 KAQERARAFDDPNKSTMDTMDDSELNFQNPTSLGDIEISQPTMLTAKLKEYQLKGLNWLV 810
Query: 299 FSWSKQTHVILADEMGLGKTIQSIAFLASLFG-ERI-SPHLVVAPLSTLRNWEREFATWA 356
+ + + ILADEMGLGKTIQSI+ +A L I P LV+AP STL NW++E +
Sbjct: 811 NLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPASTLHNWQQEITKFV 870
Query: 357 PQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEM 416
P + V+ Y G ++ R I+R++ +F VL+TSY++
Sbjct: 871 PNIKVLPYWGNAKDRKILRKF----------------WDRKHITYTKESEFHVLVTSYQL 914
Query: 417 INLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFM 476
+ LD+ + +KWQ MI+DE +K+ S + SL + R+R+LLTGTP+QNN+ EL+
Sbjct: 915 VVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWA 974
Query: 477 LMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRMLAPHLLRRVKKDVMK 526
L+HF+ F S +EF E F KDI E+Q+ RLH +L P +LRRVKK V +
Sbjct: 975 LLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMILKPFMLRRVKKHVQQ 1034
Query: 527 ELPPKKELILRVELSSKQKEYYKAILTR-NYQILTRRGGA-----QISLINVVMELRKLC 580
EL K E + +L+ +Q+ Y + R + L + +L+N+VM+ RK+C
Sbjct: 1035 ELGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDETDSTTLMNLVMQFRKVC 1094
Query: 581 CHPYMLEGVE 590
HP + E E
Sbjct: 1095 NHPDLFERAE 1104
Score = 404 (147.3 bits), Expect = 1.7e-80, Sum P(3) = 1.7e-80
Identities = 80/159 (50%), Positives = 111/159 (69%)
Query: 599 SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKV 658
S ++ + SGKL LD+++ +LK GHRVL+Y Q M+DL+E+YLT++ ++Y R+DG
Sbjct: 1312 SMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGST 1371
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
+R+ + F + F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RA
Sbjct: 1372 KLEDRRDTVADFQQRPDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRA 1430
Query: 719 HRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
HRLGQT +V ++RLITR +IEER+ + +K ++ +V+
Sbjct: 1431 HRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVI 1469
Score = 44 (20.5 bits), Expect = 1.7e-80, Sum P(3) = 1.7e-80
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 228 DISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYE 275
+I+ P +E I RSS +++K+ KK KE +Q E
Sbjct: 461 EITPLAPNLEGGITSSFHIGRSSPSRRKTGRGGPVTRPKKSKEQKQAE 508
Score = 43 (20.2 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 102 IDKILDCEMR---PTVAGDSDVSKLGSKQIFVKQYLVKWKGLSYL 143
+D + D E+ PT GD ++S+ +K+Y +K GL++L
Sbjct: 767 MDTMDDSELNFQNPTSLGDIEISQPTMLTAKLKEYQLK--GLNWL 809
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 591 (213.1 bits), Expect = 1.8e-80, Sum P(2) = 1.8e-80
Identities = 121/280 (43%), Positives = 181/280 (64%)
Query: 494 EEFKDINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKA 550
+E ++ +EE I RLH++L P LLRR+KK+V K+LP K E +++ +LS Q++ Y+
Sbjct: 669 QEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQ 728
Query: 551 ILTRNYQIL------TRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLL 604
+L N + +GG + L N +M+LRK+C HP++ + VE + + + L
Sbjct: 729 MLKHNALFVGAGTEGATKGGIK-GLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLF 787
Query: 605 ESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQ 664
+GK +LLD+++ K K GHRVL++ Q ++D++ED+L K +Y R+DG ER
Sbjct: 788 RVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERT 847
Query: 665 IRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 724
++ FNA +S FCFLLSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQ
Sbjct: 848 EMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 907
Query: 725 NKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
N+V I RLIT S+EE +++ +K+ ++ V+ K N
Sbjct: 908 NEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDN 947
Score = 322 (118.4 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 81/211 (38%), Positives = 117/211 (55%)
Query: 362 VMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI-KFDVLLTSYEMINLD 420
++ V S N E+E + P Q R+ FDVLLT+YE I D
Sbjct: 523 LVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEYIIKD 582
Query: 421 SASLKPIKWQCMIVDEGHRLKNKDSKL-FSSLKQYSTRHRVLLTGTPLQNNLDELFMLMH 479
+ L W MI+DEGHR+KN SKL F+ Y TR+R++LTGTPLQNNL EL+ L++
Sbjct: 583 KSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLN 642
Query: 480 FLDAGKFGSLEEFQEEFK------------DINQEEQ---ISRLHRMLAPHLLRRVKKDV 524
F+ F S + F++ F ++ +EE I RLH++L P LLRR+KK+V
Sbjct: 643 FVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEV 702
Query: 525 MKELPPKKELILRVELSSKQKEYYKAILTRN 555
K+LP K E +++ +LS Q++ Y+ +L N
Sbjct: 703 EKDLPDKVEKVIKCKLSGLQQQLYQQMLKHN 733
Score = 259 (96.2 bits), Expect = 1.8e-80, Sum P(2) = 1.8e-80
Identities = 77/257 (29%), Positives = 124/257 (48%)
Query: 131 KQYLVKWKGLSYLHCTWVPEK-EFLKAFKSNPRLRT-KVNNFHRQMSSNNNAEEDFVAIR 188
+Q L K K LH + +F+K +S R + F R +S +N E R
Sbjct: 310 QQLLEKRKKERNLHLQKINSIIDFIKERQSEQWSRQERCFQFGRLGASLHNQMEKDEQKR 369
Query: 189 PEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHR 248
E T R+ A + D+E YL K + + D + ++F + ++ Q +
Sbjct: 370 IERTAKQRLAALKSNDEEA-YL-KLLDQTKDTRITQLLRQTNSFLDSLSEAVRAQQNEAK 427
Query: 249 SSCNKQKSSPQDVTESTKKPKEFQQYEH--------SPEFLSGGSLHPYQLEGLNFLRFS 300
++ Q +T+ ++ ++ + H P L GG+L YQL GL ++
Sbjct: 428 ILHGEEV---QPITDEEREKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSL 484
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLFGER--ISPHLVVAPLSTLRNWEREFATWAPQ 358
++ + ILADEMGLGKTIQSI+ + L+ + I P LV+ PLST+ NW EF WAP
Sbjct: 485 YNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPS 544
Query: 359 MNVVMYVGTSQARNIIR 375
+N ++Y GT R+ ++
Sbjct: 545 LNTIIYKGTPNQRHSLQ 561
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 463 (168.0 bits), Expect = 6.8e-80, Sum P(3) = 6.8e-80
Identities = 128/332 (38%), Positives = 178/332 (53%)
Query: 241 KIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFS 300
K + +S KQK + +D T P + + P L L PYQLEGLN+L
Sbjct: 180 KTKKKSITDFFKKQKKN-EDTTTQNGAPDDAAIKQ--PRLLKNCILKPYQLEGLNWLITL 236
Query: 301 WSKQTHVILADEMGLGKTIQSIAFLASLFG-ERISPHLVVAPLSTLRNWEREFATWAPQM 359
+ + ILADEMGLGKT+QSIA LA ++ + P LV APLSTL NW EFA +AP +
Sbjct: 237 YENGLNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDL 296
Query: 360 NVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINL 419
V+ Y GT+ + + + +F +++TSYE+I
Sbjct: 297 PVLKYYGTNGYKERSAKLKNFFKQHGGTG--------------------IVITSYEIILR 336
Query: 420 DSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMH 479
D+ + W+ +IVDEGHRLKN + +L LK+ +T +R+LLTGTPLQNNL EL+ L++
Sbjct: 337 DTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLN 396
Query: 480 FLDAGKFGSLEEFQEEF-----------------KDINQEEQ---ISRLHRMLAPHLLRR 519
F+ F E F + F K IN E Q IS LH +L P LLRR
Sbjct: 397 FIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRR 456
Query: 520 VKKDVMKE-LPPKKELILRVELSSKQKEYYKA 550
+KK V+ LPPK+E I+ ++S Q+++YKA
Sbjct: 457 LKKVVLANILPPKREYIINCPMTSAQEKFYKA 488
Score = 410 (149.4 bits), Expect = 6.8e-80, Sum P(3) = 6.8e-80
Identities = 83/202 (41%), Positives = 128/202 (63%)
Query: 569 LINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVL 628
L N++M+LR++ ++ P + + + + LL++SGKLQ+L K++ L +GH+VL
Sbjct: 566 LQNMMMQLRQIIDSTFLF--YFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVL 623
Query: 629 IYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGG 688
IYSQF +MLDL+ED+ + RIDG V R+ ++++FN+ FLLSTRA G
Sbjct: 624 IYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAG 683
Query: 689 LGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKK 748
LGINL ADTV+++DSDWNP DLQAM R HR+GQ + V+++RL +IE ++
Sbjct: 684 LGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAAN 743
Query: 749 KMVLEHLVVGRLKAQNINQVTI 770
K LE +V+ K N+ ++ +
Sbjct: 744 KRNLERMVIQMGKFNNLKKLAL 765
Score = 185 (70.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 82/350 (23%), Positives = 149/350 (42%)
Query: 317 KTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
++I +AF+ + + P LV APLSTL NW EFA +AP + V+ Y GT+ + +
Sbjct: 256 QSIALLAFIYEM--DTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAK 313
Query: 377 YEFYFPXXXXXXXXXXXXXXXXXXXQ----DRIKFDVLLTSYEMINLDSASLKPIKWQCM 432
+ +F KF ++ + + N++ +K +K
Sbjct: 314 LKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKK--- 370
Query: 433 IVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF 492
++ +RL + L ++L + + ++ + + L+ G + E
Sbjct: 371 -INTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEAL 429
Query: 493 QEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKE-LPPKKELILRVELSSKQKEYYKAI 551
+ D Q+ IS LH +L P LLRR+KK V+ LPPK+E I+ ++S Q+++YKA
Sbjct: 430 NKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAG 489
Query: 552 LTRNYQ-ILTRRGGAQISLIN--VVMELRKLCCHP---YMLEG---------VEPDIEDT 596
L + + + +N + + Y L G + P +
Sbjct: 490 LNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQM 549
Query: 597 NESFKQLLESSGKLQLLDKMMVKLKEQ-GHRVLIYSQFQHMLDL-LEDYL 644
++ +K+ L+ + L MM++L++ L Y + H DL LE L
Sbjct: 550 DKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLL 599
Score = 48 (22.0 bits), Expect = 6.8e-80, Sum P(3) = 6.8e-80
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 12 SDRKPIYQLDE--SDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENLMSCDTC 69
+D PI+ D+ SD+D + T ++V AKD + + L DT
Sbjct: 65 NDTAPIWLQDDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSEMDTK 124
Query: 70 TYAYHAKCL 78
T + K L
Sbjct: 125 TVSLKLKKL 133
Score = 43 (20.2 bits), Expect = 3.5e-35, Sum P(3) = 3.5e-35
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 539 ELSSKQKEYYKAILT-------RNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGV 589
E SSK+++ K +T +N T+ G + I L+ PY LEG+
Sbjct: 173 EHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGL 230
Score = 40 (19.1 bits), Expect = 2.8e-34, Sum P(4) = 2.8e-34
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 224 EYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK--EF-QQYEHSPEF 280
E +SD A Q ++ + ++S + S + + S T S K K EF +Q +
Sbjct: 87 EDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSEMDTKTVSLKLKKLNEFVRQSQVYSSI 146
Query: 281 LSGGSLH 287
++ LH
Sbjct: 147 IADTLLH 153
Score = 37 (18.1 bits), Expect = 9.8e-79, Sum P(3) = 9.8e-79
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 20 LDESDDDADFEQGKPG 35
+ +SD D D E K G
Sbjct: 46 ISDSDSDLDSEDNKHG 61
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 379 (138.5 bits), Expect = 1.9e-78, Sum P(4) = 1.9e-78
Identities = 86/192 (44%), Positives = 118/192 (61%)
Query: 585 MLEGVEPDIEDTNESF--KQLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
+L + P I F ++L++ GKLQ L ++ KLK GHR LI++Q MLD+LE
Sbjct: 1049 LLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLE 1108
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVII 701
++ + Y R+DG ERQ + RFN N F F+LSTR+GG+GINL ADTVI
Sbjct: 1109 AFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIF 1167
Query: 702 YDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLK 761
YDSDWNP D QA R HR+GQT +V I+RLI+ +IEE +++ +K VL++LV+
Sbjct: 1168 YDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVI---- 1223
Query: 762 AQNINQVTIFFQ 773
QN T FF+
Sbjct: 1224 -QNGEYNTEFFK 1234
Score = 354 (129.7 bits), Expect = 1.9e-78, Sum P(4) = 1.9e-78
Identities = 77/193 (39%), Positives = 118/193 (61%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F V +T+Y ++ DS K KW+ +I+DE H +KN S+ + +L ++++ R+LLTGTP
Sbjct: 636 FHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTP 695
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEF-----------KDINQEEQISRLHRMLAPH 515
LQN+L EL+ LMHFL F S +EF++ F + IN+E I RLH +L P
Sbjct: 696 LQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEV-IDRLHNVLRPF 754
Query: 516 LLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVME 575
LLRR+K+DV K+LP K E ++ LS +Q+ Y+ + T G+ +I+++M+
Sbjct: 755 LLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQ 814
Query: 576 LRKLCCHPYMLEG 588
LRK+C HP + EG
Sbjct: 815 LRKVCNHPDLFEG 827
Score = 206 (77.6 bits), Expect = 1.9e-78, Sum P(4) = 1.9e-78
Identities = 45/99 (45%), Positives = 62/99 (62%)
Query: 280 FLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER-I-SPHL 337
FL SL YQ GL++L + K+ + ILADEMGLGKTI +IA LA L ++ I PHL
Sbjct: 530 FLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHL 589
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
+V P S + NWE EF W P ++ Y G+++ R + R+
Sbjct: 590 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ 628
Score = 46 (21.3 bits), Expect = 1.9e-78, Sum P(4) = 1.9e-78
Identities = 21/91 (23%), Positives = 41/91 (45%)
Query: 175 SSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQP 234
S + E+ E VD +LA E D++ L +EL+ + ++ +I+ Q
Sbjct: 354 SVKSRKEDHTYDFNDEQEDVDFVLANGEEKDDEATLAVEEELAKADNE-DHVEEIALLQK 412
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTEST 265
E E I++ ++ + S +D +ES+
Sbjct: 413 ESEMPIEVLLARYKEDFGGKDIS-EDESESS 442
Score = 44 (20.5 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 22/87 (25%), Positives = 45/87 (51%)
Query: 548 YKAILTRNYQILTRRGGAQISLINVVME--LRKLCCHP-YM-LEGVEPDIEDTNESF-KQ 602
+KA+ T++ + ++ GA I L N +E L++ YM L+ VE + N+ F ++
Sbjct: 1245 HKALTTKDEKETSKHCGADIPLSNADVEAALKQAEDEADYMALKRVEQEEAVDNQEFTEE 1304
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLI 629
+E +L+++ +K E + L+
Sbjct: 1305 PVERPEDDELVNEDDIKADEPADQGLV 1331
Score = 39 (18.8 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 636 MLDLLEDYLTFKKWQYERIDGKVGGAERQIR--IDRFN 671
M + + + FK W I G V G E+ + IDR +
Sbjct: 711 MPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLH 748
Score = 37 (18.1 bits), Expect = 1.7e-77, Sum P(4) = 1.7e-77
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 195 DRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ 254
D L E ++ E ++ E + + E + ++ A Q E++ ++ R + S +
Sbjct: 212 DYDLKSEDETEDDEDTIEEDEKHFTKR--ERQEELEALQNEVDLPVEELLRRYTSGRVSR 269
Query: 255 KSSP-QDVTE 263
++SP +D E
Sbjct: 270 ETSPVKDENE 279
Score = 37 (18.1 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 15/81 (18%), Positives = 38/81 (46%)
Query: 592 DIEDTNESFKQLLESSGKLQLLDKMMVKLKEQ-----GHRVLIYSQFQHMLDLLEDYLTF 646
D + E+++Q +E + QL++ + + +E+ VL ++ H+L +
Sbjct: 1453 DADFATEAYRQQVEVLAQHQLMEDLENEAREREAAEVAEMVLTQNESAHVLKPKKKKKA- 1511
Query: 647 KKWQYERID-GKVGGAERQIR 666
KK +Y+ + G + + ++
Sbjct: 1512 KKAKYKSLKKGSLAAESKHVK 1532
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 602 (217.0 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 127/279 (45%), Positives = 181/279 (64%)
Query: 493 QEEFKDINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
QE+ ++ +EE I RLH++L P LLRR+KKDV K+LP K E +L+ LS Q Y+
Sbjct: 699 QEKI-ELTEEESLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQ 757
Query: 550 AILTRNYQILTRR-GGAQIS---LINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLE 605
+L N + GGA+ L N +M+LRK+C HP++ E VE + + + +
Sbjct: 758 QMLKHNALFVGADVGGAKSGIKGLNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDLIWR 817
Query: 606 SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQI 665
SGK +LLD+++ K K+ GHRVL++ Q ++D++ED+L +K +Y R+DG ERQ
Sbjct: 818 VSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQD 877
Query: 666 RIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTN 725
+ FNA +S FCFLLSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQ N
Sbjct: 878 MLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 937
Query: 726 KVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
+V I RLIT S+EE +++ +K+ ++ V+ K N
Sbjct: 938 EVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGKFDN 976
Score = 307 (113.1 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 71/165 (43%), Positives = 101/165 (61%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQY-STRHRVLLTGT 465
F VLLT+YE + + L + MI+DEGHR+KN SKL +L+ Y T++R++LTGT
Sbjct: 599 FQVLLTTYEYVIRERPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGT 658
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK------------DINQEEQ---ISRLHR 510
PLQNNL EL+ L++F+ G F S++ F + F ++ +EE I RLH+
Sbjct: 659 PLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHK 718
Query: 511 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
+L P LLRR+KKDV K+LP K E +L+ LS Q Y+ +L N
Sbjct: 719 VLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHN 763
Score = 226 (84.6 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 77/275 (28%), Positives = 131/275 (47%)
Query: 119 DVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNN 178
++ KL +++ KQ++ K L T E ++++ + L ++NNFH+
Sbjct: 327 ELKKLEAREAKRKQHIEK-VDLVVEKSTSRSEAKYVRDHYRSHYLVRQINNFHQ----TT 381
Query: 179 NAEEDFVAIRPEWTTVDRILACRGEDDEK--EYLVKYKELSYDECYWEYESDISAFQPEI 236
EE + + E T R+ A R D+E + L K K+ + + + ++
Sbjct: 382 EKEE---SKKLERTAKQRLQALRSNDEEAYLKLLDKTKDHRITHLLKQTNQFLDSLTEKV 438
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPK-EFQQ----YE--H--------SPEFL 281
+ + S S + SP+ E+ K E ++ YE H P L
Sbjct: 439 RA--QQEEASGGSMGTPRHGSPEVAVENKSDDKAELREKTDYYEVAHRIKEKITEQPTIL 496
Query: 282 SGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI-SPHLVVA 340
GG L YQ++GL ++ ++ + ILADEMGLGKTIQSI+ + L ++ + L++
Sbjct: 497 VGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYLIEKKHENKFLIIV 556
Query: 341 PLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIR 375
PLST+ NW EF WAP + V++Y G+ Q R ++
Sbjct: 557 PLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQ 591
Score = 44 (20.5 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 436 EGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEE 495
+GH L + KL S K Y + ++ P+ N + LD KF S E+F E
Sbjct: 1215 DGHNLSDIFIKL-PSRKLYPDYYSIIKK--PVSIN-----QVKKQLDQEKFASFEDFIAE 1266
Query: 496 FKDI 499
K +
Sbjct: 1267 LKQM 1270
Score = 40 (19.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 490 EEFQEEFKDINQEEQISRLHRMLAPHL 516
EE E+F++ Q + R R PH+
Sbjct: 1135 EEDDEDFEEAAQPRKRQRRARTPLPHI 1161
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 657 (236.3 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 150/374 (40%), Positives = 230/374 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ + +R+LLTGT
Sbjct: 74 EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGT 133
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S ++F F N ++ + RLH +L P LLRR+K
Sbjct: 134 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKT 193
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAI---LTRNYQILTRRGGAQISLINVVMELRKL 579
DV K LPPKKE+ + + LS Q+E++ + ++ N + ++ ++NV+M LR+
Sbjct: 194 DVEKSLPPKKEIKVYLGLSKMQREWFVILAFFISENSNNSNKNH--KLDILNVIMLLREA 251
Query: 580 -CCHP-YMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIY-SQFQHM 636
CC + L + D+ + S ++ K+ L M + L+++ L SQF
Sbjct: 252 KCCGASFCLPSL--DLLPSTLSISHIVLF--KMTLFPGMKMILRQKSRCFLTSDSQFA-F 306
Query: 637 LDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATA 696
L L DY + + Y I G+ ++ I+ FNA NSS+F F+LSTRAGGLGINLA+A
Sbjct: 307 LSALPDYEHWPSYFYRSISGQYLFVYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASA 366
Query: 697 DTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLV 756
D VI+YDSDWNP DLQAM RAHR+GQ V +FRLIT ++EER+++ + K+ L+ +V
Sbjct: 367 DVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIV 426
Query: 757 V--GRLKAQNINQV 768
+ GRL Q N++
Sbjct: 427 IQQGRLIDQQSNKL 440
Score = 141 (54.7 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 314 GLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
GLGKT+Q+IA L L R PH+V+ P STL NW EF W P + V+ +VG AR
Sbjct: 3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62
>UNIPROTKB|I3LDG1 [details] [associations]
symbol:LOC100738357 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000031310 OMA:ENWRTEL Uniprot:I3LDG1
Length = 323
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 161/315 (51%), Positives = 213/315 (67%)
Query: 416 MINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELF 475
MI D LK I W C+I+DE HRLKN++ KL LK + H+VLLTGTPLQN+++ELF
Sbjct: 1 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELF 60
Query: 476 MLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELI 535
L++FL+ +F S F EEF D+ EEQ+ +L +L P +LRR+K DV K L PK+E I
Sbjct: 61 SLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETI 120
Query: 536 LRVELSSKQKEYYKAILTRNYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEPD 592
+ VEL++ QK+YY+AIL +N+ LT+ G Q + LIN +MELRK C HPY++ G E
Sbjct: 121 IEVELTNIQKKYYRAILEKNFSFLTK-GANQHNMPNLINTMMELRKCCNHPYLINGAEEK 179
Query: 593 I-EDTNES---------FKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLED 642
I ED ++ + +++++GKL L+DK++ KL GH+VLI+SQ LD+LED
Sbjct: 180 ILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILED 239
Query: 643 YLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIY 702
YL +++ YERIDG+V G RQ IDRF +S RF FLL TRAGGLGINL ADT II+
Sbjct: 240 YLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIF 299
Query: 703 DSDWNPHADLQAMAR 717
DSDWNP DLQ R
Sbjct: 300 DSDWNPQNDLQVTIR 314
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 607 (218.7 bits), Expect = 2.8e-77, Sum P(2) = 2.8e-77
Identities = 120/278 (43%), Positives = 184/278 (66%)
Query: 498 DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
D+ +EEQ I RLH++L P LLRR+KKDV K+LP K+E +++ S+ Q + K + T
Sbjct: 740 DLTEEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATH 799
Query: 555 NYQILTRRGGAQIS---LINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQ 611
N +++ G ++ L N++M+LRKLC HP++ E VE + + + ++GK +
Sbjct: 800 NKMVVSDGKGGKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDLIWRTAGKFE 859
Query: 612 LLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFN 671
LLD+++ K K GHRVL++ Q +++++ED+L + +Y R+DG +R + FN
Sbjct: 860 LLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFN 919
Query: 672 AKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFR 731
A +S FCFLLSTRAGGLG+NL TADTVII+DSDWNPH DLQA RAHR+GQ N+V I R
Sbjct: 920 APDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILR 979
Query: 732 LITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNINQ 767
LIT S+EE++++ + K+ ++ V+ G+ ++ N+
Sbjct: 980 LITSNSVEEKILERAQFKLDMDGKVIQAGKFDNKSTNE 1017
Score = 353 (129.3 bits), Expect = 3.7e-45, Sum P(2) = 3.7e-45
Identities = 81/179 (45%), Positives = 112/179 (62%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYST-RHRVLLTGT 465
F VLLT+YE I D L IKW MIVDEGHR+KN SKL S+L QY T R+R++LTGT
Sbjct: 636 FQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTGT 695
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK------------DINQEEQ---ISRLHR 510
PLQNNL EL+ L++F+ F S++ F E F D+ +EEQ I RLH+
Sbjct: 696 PLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHK 755
Query: 511 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISL 569
+L P LLRR+KKDV K+LP K+E +++ S+ Q + K + T N +++ G ++ +
Sbjct: 756 VLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNKMVVSDGKGGKVGM 814
Score = 213 (80.0 bits), Expect = 2.8e-77, Sum P(2) = 2.8e-77
Identities = 42/102 (41%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE 331
++ P L GG+L YQ++GL ++ ++ + ILADEMGLGKTIQ+I+ + +
Sbjct: 523 EEITEQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHIIER 582
Query: 332 RIS--PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+ + P LV+ PLSTL NW EF WAP ++ ++Y G AR
Sbjct: 583 KRNNGPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNAR 624
Score = 44 (20.5 bits), Expect = 2.7e-61, Sum P(3) = 2.7e-61
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 257 SPQDVTESTKKPKEFQQY---EHSPEFLSGGSL 286
+PQ + E+ +K K+ Q+ + PE+L +L
Sbjct: 23 TPQHIQETLQKFKQMQEQGVRQDDPEYLKAHNL 55
Score = 41 (19.5 bits), Expect = 2.7e-61, Sum P(3) = 2.7e-61
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 490 EEFQEEF----KDINQEEQISRLHRMLAPHLL 517
E FQ + K ++ + SR HRM P L+
Sbjct: 218 EHFQSPYDLIPKTVSFTDHASRSHRMRIPALM 249
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 442 (160.7 bits), Expect = 4.4e-77, Sum P(4) = 4.4e-77
Identities = 109/297 (36%), Positives = 167/297 (56%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF-GERI-SP 335
P+ L+ +L YQL+GLN+L + + + ILADEMGLGKT+QSI+ LA L I P
Sbjct: 699 PKILAC-TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGP 757
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
LVV P STL NW E + + PQ ++ Y G + R ++R++
Sbjct: 758 FLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKF----------------WD 801
Query: 396 XXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYS 455
F V++TSY+M+ D+ L+ +KWQ MI+DE +K+ S + +L +
Sbjct: 802 RKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFH 861
Query: 456 TRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQI 505
R+R+LLTGTP+QN++ EL+ L+HF+ F S +EF E F KDI ++Q+
Sbjct: 862 CRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQL 921
Query: 506 SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI---LTRNYQIL 559
RLH +L P +LRRVKK+V EL K E+ + +L+ +Q + Y+ + ++ NY +
Sbjct: 922 RRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAI 978
Score = 429 (156.1 bits), Expect = 4.4e-77, Sum P(4) = 4.4e-77
Identities = 85/173 (49%), Positives = 120/173 (69%)
Query: 599 SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKV 658
S + + S KL+ LD+++VKLK +GHRVLIY Q M+DL+E+YLT++++ + R+DG
Sbjct: 1290 SMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSS 1349
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
+R+ + + N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RA
Sbjct: 1350 KLEDRRDLVHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRA 1408
Query: 719 HRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV-GRLKAQNINQVTI 770
HRLGQT +V ++RL+ RG+IEERM K+K ++ +V+ G+ + +NI + +
Sbjct: 1409 HRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQEKNIKTIEV 1461
Score = 151 (58.2 bits), Expect = 1.3e-46, Sum P(4) = 1.3e-46
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 489 LEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 548
+E E +NQ+ Q+ RLH +L P +LRRVKK+V EL K E+ + +L+ +Q + Y
Sbjct: 906 IESHAEANTKLNQQ-QLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLY 964
Query: 549 KAI---LTRNYQILTR------------RGGAQISLINVVMELRKLCCHPYMLEGVEPD 592
+ + ++ NY + G+ +LIN VM+ RK+C HP + E + D
Sbjct: 965 QVLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVD 1023
Score = 71 (30.1 bits), Expect = 7.0e-40, Sum P(4) = 7.0e-40
Identities = 31/173 (17%), Positives = 67/173 (38%)
Query: 535 ILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIE 594
+L+ ++S+ A + G+ +LIN VM+ RK+C HP + E + D
Sbjct: 966 VLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSP 1025
Query: 595 DTNESFKQ---LLESS---GKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFK- 647
+ +F + +L +S ++ + L + +F ++ + + +
Sbjct: 1026 FSFTTFGKTTSMLTASVANNNSSVISNSNMNLSSMSSNNISNGKFTDLIYSSRNPIKYSL 1085
Query: 648 -KWQYERI-------DGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGIN 692
+ YE + D + + ++ + FN + C LS G +N
Sbjct: 1086 PRLIYEDLILPNYNNDVDIANKLKNVKFNIFNPSTNYELCLFLSKLTGEPSLN 1138
Score = 49 (22.3 bits), Expect = 4.4e-77, Sum P(4) = 4.4e-77
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRS---SCNK-----Q 254
ED+E+E + E + + ++D F P++E+ K S S S S N
Sbjct: 260 EDEEEEEIEDLDEEDFAAFEEQDDNDDEDFNPDVEKRRKRSSSSSSSTKLSMNSLSLITS 319
Query: 255 KSSPQDVTESTKKPK 269
K +++T ++ +PK
Sbjct: 320 KKINKNITINSDRPK 334
Score = 39 (18.8 bits), Expect = 9.0e-77, Sum P(3) = 9.0e-77
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 21 DESDDDADFE-QGKPGTTVEKFERIVRIDAKD 51
+E+D+D+D + + + G E+ E I +D +D
Sbjct: 243 NENDNDSDNDDEEENGEEDEEEEEIEDLDEED 274
Score = 39 (18.8 bits), Expect = 2.6e-34, Sum P(3) = 2.6e-34
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 482 DAGKFGSLEEFQEEFKDINQEE 503
D + G +E +EE +D+++E+
Sbjct: 253 DEEENGEEDEEEEEIEDLDEED 274
Score = 37 (18.1 bits), Expect = 4.4e-77, Sum P(4) = 4.4e-77
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 21 DESDDDADFEQGK 33
DE DD+ + E G+
Sbjct: 144 DEEDDEDELEDGE 156
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 587 (211.7 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 121/275 (44%), Positives = 178/275 (64%)
Query: 498 DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
++ +EE I RLH++L P LLRR+KKDV K+LP K E +++ + S+ Q + Y+ +L
Sbjct: 984 ELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRY 1043
Query: 555 N--YQILTRRGGAQISLINV---VMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGK 609
N Y G +++ N +M+L+K+C HP++ E VE I E+ Q+ +GK
Sbjct: 1044 NMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGK 1103
Query: 610 LQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDR 669
+LLDK++ K K GH+VLI+ Q +++++ED+L F+ +Y R+DG +R +
Sbjct: 1104 FELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKS 1163
Query: 670 FNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMI 729
FNA +S FCFLLSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQ N+V I
Sbjct: 1164 FNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 1223
Query: 730 FRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
RLIT S+EE +++ KK+ ++ V+ K N
Sbjct: 1224 LRLITENSVEEMILERAHKKLEIDGKVIQAGKFDN 1258
Score = 302 (111.4 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 70/165 (42%), Positives = 104/165 (63%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQ-YSTRHRVLLTGT 465
F ++LT++E + D L IKW MI+DEGHR+KN +SKL +L Q Y + +R++LTGT
Sbjct: 880 FQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGT 939
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK------------DINQEEQ---ISRLHR 510
PLQNNL EL+ L++F+ F S++ F E F ++ +EE I RLH+
Sbjct: 940 PLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHK 999
Query: 511 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
+L P LLRR+KKDV K+LP K E +++ + S+ Q + Y+ +L N
Sbjct: 1000 VLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYN 1044
Score = 242 (90.2 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 75/244 (30%), Positives = 119/244 (48%)
Query: 150 EKEFLKAFKSNPRLR---TKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDE 206
++ +KA K + RL TK+NNFH N A+E+ + E R+ A + D+E
Sbjct: 638 DRSSIKAVKKSDRLSRFMTKINNFH-----NQTAKEEQKKL--EKMAKQRLQALKSNDEE 690
Query: 207 KEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSC--NKQKSSPQDVT-- 262
YL K + + D + F + ++ Q + + + + + P V
Sbjct: 691 A-YL-KLLDHTKDTRITHLLEQTNQFLDSLALAVQSQQKEAQDNLAYSGRAIEPASVEPL 748
Query: 263 ESTKKPK-EFQQYEH--------SPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
+ K+ K ++ H P L GG+L YQL+GL ++ ++ + ILADEM
Sbjct: 749 DDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEM 808
Query: 314 GLGKTIQSIAFLASLFG-ERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
GLGKTIQ+I+ L L ++I P LV+ PLST+ NW EF WAP + + Y GT R
Sbjct: 809 GLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQR 868
Query: 372 NIIR 375
+++
Sbjct: 869 KVMQ 872
Score = 44 (20.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 440 LKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
+K K S L S L Q R+ +L G P ++
Sbjct: 1025 VKCKSSALQSKLYQQMLRYNMLYAGDPANGSV 1056
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 587 (211.7 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 121/275 (44%), Positives = 178/275 (64%)
Query: 498 DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
++ +EE I RLH++L P LLRR+KKDV K+LP K E +++ + S+ Q + Y+ +L
Sbjct: 984 ELTEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRY 1043
Query: 555 N--YQILTRRGGAQISLINV---VMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGK 609
N Y G +++ N +M+L+K+C HP++ E VE I E+ Q+ +GK
Sbjct: 1044 NMLYAGDPANGSVPVTIKNANNQIMQLKKICNHPFVYEEVENLINPNIETNDQIWRVAGK 1103
Query: 610 LQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDR 669
+LLDK++ K K GH+VLI+ Q +++++ED+L F+ +Y R+DG +R +
Sbjct: 1104 FELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKS 1163
Query: 670 FNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMI 729
FNA +S FCFLLSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQ N+V I
Sbjct: 1164 FNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 1223
Query: 730 FRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
RLIT S+EE +++ KK+ ++ V+ K N
Sbjct: 1224 LRLITENSVEEMILERAHKKLEIDGKVIQAGKFDN 1258
Score = 302 (111.4 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 70/165 (42%), Positives = 104/165 (63%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQ-YSTRHRVLLTGT 465
F ++LT++E + D L IKW MI+DEGHR+KN +SKL +L Q Y + +R++LTGT
Sbjct: 880 FQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGT 939
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK------------DINQEEQ---ISRLHR 510
PLQNNL EL+ L++F+ F S++ F E F ++ +EE I RLH+
Sbjct: 940 PLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHK 999
Query: 511 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
+L P LLRR+KKDV K+LP K E +++ + S+ Q + Y+ +L N
Sbjct: 1000 VLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYN 1044
Score = 242 (90.2 bits), Expect = 1.2e-76, Sum P(2) = 1.2e-76
Identities = 75/244 (30%), Positives = 119/244 (48%)
Query: 150 EKEFLKAFKSNPRLR---TKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDE 206
++ +KA K + RL TK+NNFH N A+E+ + E R+ A + D+E
Sbjct: 638 DRSSIKAVKKSDRLSRFMTKINNFH-----NQTAKEEQKKL--EKMAKQRLQALKSNDEE 690
Query: 207 KEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSC--NKQKSSPQDVT-- 262
YL K + + D + F + ++ Q + + + + + P V
Sbjct: 691 A-YL-KLLDHTKDTRITHLLEQTNQFLDSLALAVQSQQKEAQDNLAYSGRAIEPASVEPL 748
Query: 263 ESTKKPK-EFQQYEH--------SPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEM 313
+ K+ K ++ H P L GG+L YQL+GL ++ ++ + ILADEM
Sbjct: 749 DDEKREKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEM 808
Query: 314 GLGKTIQSIAFLASLFG-ERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
GLGKTIQ+I+ L L ++I P LV+ PLST+ NW EF WAP + + Y GT R
Sbjct: 809 GLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQR 868
Query: 372 NIIR 375
+++
Sbjct: 869 KVMQ 872
Score = 44 (20.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 440 LKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNL 471
+K K S L S L Q R+ +L G P ++
Sbjct: 1025 VKCKSSALQSKLYQQMLRYNMLYAGDPANGSV 1056
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 577 (208.2 bits), Expect = 6.0e-76, Sum P(2) = 6.0e-76
Identities = 113/263 (42%), Positives = 175/263 (66%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++ + + +R+LLTGT
Sbjct: 285 EWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGT 344
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S E+F F N ++ + RLH +L P LLRR+K
Sbjct: 345 PLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVERLHTVLKPFLLRRIKT 404
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + + LS Q+E+Y IL ++ +L G ++ L+N++M+LRK C
Sbjct: 405 DVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQLRKCCN 464
Query: 582 HPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLE 641
HPY+ +G EP T + + ++ +SGK+ +LDK++ KLKEQG RVLI+SQ +LD+LE
Sbjct: 465 HPYLFDGAEPGPPYTTD--EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILE 522
Query: 642 DYLTFKKWQYERIDGKVGGAERQ 664
DY ++ ++Y R+DG+ ER+
Sbjct: 523 DYCMWRGYEYCRLDGQTPHEERE 545
Score = 481 (174.4 bits), Expect = 1.2e-63, Sum P(2) = 1.2e-63
Identities = 114/290 (39%), Positives = 171/290 (58%)
Query: 499 INQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQI 558
+ ++ + RLH +L P LLRR+K DV K LPPKKE+ + + LS Q+E+Y IL ++ +
Sbjct: 381 LGDQKLVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDV 440
Query: 559 LTRRGGA-QISLINVVMELRKLCCHPYMLEGVEP------DIEDTNESFKQL-------- 603
L G ++ L+N++M+LRK C HPY+ +G EP D + S K +
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAK 500
Query: 604 LESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAER 663
L+ G L+ M +L + ++ +++ L+ ++ + D K+ E
Sbjct: 501 LKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCR--LDGQTPHEEREEILKDFKIIFHEY 558
Query: 664 Q---IRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
Q I+ FN NSS+F F+LSTRAGGLGINLA+AD VI+YDSDWNP DLQAM RAHR
Sbjct: 559 QGSNEAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHR 618
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNINQV 768
+GQ V +FRLIT ++EER+++ + K+ L+ +V+ GRL Q N++
Sbjct: 619 IGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKM 668
Score = 248 (92.4 bits), Expect = 6.0e-76, Sum P(2) = 6.0e-76
Identities = 54/137 (39%), Positives = 77/137 (56%)
Query: 237 ERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNF 296
+ I + HR + +Q+ + ++ES K ++E SP ++ GG L YQ+ GLN+
Sbjct: 139 QSLISVGDYRHRRT--EQEEDEELLSESRKTSNVCVRFEVSPSYVKGGPLRDYQIRGLNW 196
Query: 297 LRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREFAT 354
L + + ILADEMGLGKT+Q+IA L L R PH+V+ P STL NW EF
Sbjct: 197 LISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKR 256
Query: 355 WAPQMNVVMYVGTSQAR 371
W P + V+ +VG AR
Sbjct: 257 WVPSLRVICFVGDKDAR 273
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 446 (162.1 bits), Expect = 8.2e-76, Sum P(3) = 8.2e-76
Identities = 109/280 (38%), Positives = 164/280 (58%)
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS---PHLVVAP 341
+L YQL+GLN+L + + + ILADEMGLGKT+QSI+ LA L E + P LVV P
Sbjct: 671 TLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYL-AETYNMWGPFLVVTP 729
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXX 401
STL NW++E + P+ V+ Y G ++ R I+R++
Sbjct: 730 ASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKF---------------WDRKSLRYD 774
Query: 402 QDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVL 461
+D F VL+TSY++I D A + +KWQ MI+DE +K+ S + SL + R+R+L
Sbjct: 775 KDS-PFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLL 833
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRM 511
LTGTP+QN++ EL+ L+HF+ F S +EF + F KDI E+Q+ RLH +
Sbjct: 834 LTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMI 893
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
L P +LRR+KK+V EL K E+ + +L+++QK+ Y+ +
Sbjct: 894 LKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQL 933
Score = 412 (150.1 bits), Expect = 8.2e-76, Sum P(3) = 8.2e-76
Identities = 77/162 (47%), Positives = 111/162 (68%)
Query: 599 SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKV 658
S + + SGKL LD++++ LK GHR+LIY Q M+ + E+YL +K ++Y R+DG
Sbjct: 1227 SMDRFIAESGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGST 1286
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
R+ + + N F F+LSTRAGGLG+NL +ADTVI YDSDWNP D QAM RA
Sbjct: 1287 TIESRREMVQAWQT-NPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRA 1345
Query: 719 HRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRL 760
HR+GQT +V +FRL+TR +IE+++++ K+K ++ LVVG +
Sbjct: 1346 HRIGQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVVGNM 1387
Score = 150 (57.9 bits), Expect = 1.7e-44, Sum P(3) = 1.7e-44
Identities = 39/124 (31%), Positives = 73/124 (58%)
Query: 502 EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR----NYQ 557
E+Q+ RLH +L P +LRR+KK+V EL K E+ + +L+++QK+ Y+ + ++ +
Sbjct: 884 EQQLRRLHMILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTD 943
Query: 558 IL---TRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLD 614
+L + + SL N+VM+ RK+C HP + E D+ ++ SF + E+ L+ +
Sbjct: 944 LLELESNSTSSDSSLANLVMQFRKVCNHPDLFE--RADV-NSPFSFGKFAETGSFLRETN 1000
Query: 615 KMMV 618
++ V
Sbjct: 1001 ELDV 1004
Score = 41 (19.5 bits), Expect = 8.2e-76, Sum P(3) = 8.2e-76
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 112 PTVAGDSDVSKLGSKQIFVKQYLVKWKGLSYL 143
PT+ GD + + + +K+Y +K GL++L
Sbjct: 654 PTLLGDITIPQPNMLKCTLKEYQLK--GLNWL 683
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 584 (210.6 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 120/273 (43%), Positives = 175/273 (64%)
Query: 498 DINQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
++ +EE I RLH++L P LLRR+KKDV ELP K E ++R ++S Q++ Y +
Sbjct: 620 ELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKH 679
Query: 555 N--YQILTRRGGAQIS-LINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQ 611
Y +RG I L N VM+L+K+C HP++ E VE I+ T ++ L SGK +
Sbjct: 680 GMLYVEDAKRGKTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFE 739
Query: 612 LLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFN 671
LLD+++ KL GHR+L++ Q +++++EDYL +++W+Y R+DG +R + FN
Sbjct: 740 LLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFN 799
Query: 672 AKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFR 731
+ FLLSTRAGGLG+NL TADTVII+DSDWNPH DLQA RAHR+GQT +V I+R
Sbjct: 800 DPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYR 859
Query: 732 LITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
LIT S+EE ++ + K+ ++ V+ K N
Sbjct: 860 LITEKSVEENILARAQYKLDIDGKVIQAGKFDN 892
Score = 320 (117.7 bits), Expect = 6.8e-43, Sum P(2) = 6.8e-43
Identities = 74/158 (46%), Positives = 101/158 (63%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQY-STRHRVLLTGT 465
F VLLT+YE I D L IKW MI+DEGHR+KN SKL ++L Y S+R+R++LTGT
Sbjct: 516 FQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGT 575
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK------------DINQEEQ---ISRLHR 510
PLQNNL EL+ L++F+ F S++ F E F ++ +EE I RLH+
Sbjct: 576 PLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHK 635
Query: 511 MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 548
+L P LLRR+KKDV ELP K E ++R ++S Q++ Y
Sbjct: 636 VLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLY 673
Score = 224 (83.9 bits), Expect = 1.6e-74, Sum P(2) = 1.6e-74
Identities = 97/381 (25%), Positives = 158/381 (41%)
Query: 11 RSDRKPI-YQLDESDDDADFEQGKPGTTVEKFERIVR--IDAKDDSCQACGESENLMSCD 67
+ RK + YQ+ E DD + + +E + ++R + KDD+ E NL +
Sbjct: 141 KQQRKYLQYQISE-DDAIKNRMFRRMSDLESYPAVMRDVAELKDDN-----ERLNLDTIK 194
Query: 68 TCTYAYHAKC-LVPPLKAPPSGSWRC-PECVSPLNDIDKILDCEMRPTVAGDSD--VSKL 123
K L+ ++ C P + +N +++ + C RP + + L
Sbjct: 195 RNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVER-MSCR-RPKLVPQATRLTEVL 252
Query: 124 GSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEED 183
+Q ++ +K K YL +E K+ K N S+ EE
Sbjct: 253 ERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQ 312
Query: 184 FVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQ 243
R E R+ A + E+DE+ YL K + + D + + +K+Q
Sbjct: 313 R---RAERNAKQRLQALK-ENDEEAYL-KLIDQAKDTRITHLLRQTDHYLDSLAAAVKVQ 367
Query: 244 SRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHS--------PEFLSGGSLHPYQLEGLN 295
S + + E +K ++ H+ P L GG L YQL GL
Sbjct: 368 QSQFGESAYDEDMDRRMNPEDDRKI-DYYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQ 426
Query: 296 FLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWEREFA 353
++ ++ + ILADEMGLGKTIQ+I+ + L ++ P LV+ PLSTL NW EF
Sbjct: 427 WMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFE 486
Query: 354 TWAPQMNVVMYVGTSQARNII 374
WAP + ++Y G Q R +
Sbjct: 487 RWAPSIVKIVYKGPPQVRKAL 507
Score = 49 (22.3 bits), Expect = 4.3e-56, Sum P(2) = 4.3e-56
Identities = 18/80 (22%), Positives = 38/80 (47%)
Query: 207 KEYLVKYKELSY-----DECYWEYESDISAFQPEIERFIK--IQSRSHRSSCNKQKSSPQ 259
K+ ++ YK+LS D+C +S + ++ +K +Q+ + S Q
Sbjct: 76 KQQVLAYKKLSQNLPAPDDCILSVLLRLSKDEQLLQSIVKQPLQNSKVDGKVRRDFGSCQ 135
Query: 260 DVTESTKKPKEFQQYEHSPE 279
+T S K+ +++ QY+ S +
Sbjct: 136 -ITPSAKQQRKYLQYQISED 154
Score = 44 (20.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 33/127 (25%), Positives = 55/127 (43%)
Query: 477 LMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDV--MKELPPKKEL 534
L+ + +F EE E+ D+ QEE + R R P + +D M E+ + E
Sbjct: 963 LIQVSELPEFYQREE-PEKTTDLLQEEPLGRGARRRTPVVYDEAVRDAQWMAEMDMESEA 1021
Query: 535 IL---RVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMEL-RKLCCHPYMLEGVE 590
R + + + A LT N + +RG A +L + L R++C Y + V
Sbjct: 1022 RPTRGRPKRNIASVDETPA-LTLNGKPKKKRGPAPDTLTSEHRSLLRRVCLEIY--KAVN 1078
Query: 591 PDIEDTN 597
++ED N
Sbjct: 1079 -ELEDDN 1084
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 734 (263.4 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 189/528 (35%), Positives = 285/528 (53%)
Query: 252 NKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS-----LHPYQLEGLNFLRFSWSKQTH 306
NK K + +D + +E + +H F+ GG L PYQ++GL ++ ++ +
Sbjct: 330 NKTKMNIEDYYTTAHGVREEIKEQH---FMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLN 386
Query: 307 VILADEMGLGKTIQSIAFLASLFG-ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMY 364
ILADEMGLGKTIQ+IAF+ L ++ S P LV+ PLST+ NW+ EF WA ++++ Y
Sbjct: 387 GILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAY 446
Query: 365 VGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASL 424
G + R + + R K+ ++ + + N
Sbjct: 447 KGPKETRKVFEPIIKSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLT 506
Query: 425 KPI--KWQCM--IVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHF 480
+ + ++QC ++ G L+NK +L++ L LL + E + F
Sbjct: 507 EMLNTRFQCQRRLLITGTPLQNKLPELWALLN-------FLLPSIFSSCSTFEQWFNAPF 559
Query: 481 LDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVEL 540
G+ +E QEE I I RLH++L P LLRR+KK+V ELP K E ++R ++
Sbjct: 560 ATTGE--KVELTQEETMLI-----IRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDM 612
Query: 541 SSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNE-- 598
S+ QK YK + + + + SL N ++ LRKLC HP++ E VE + +
Sbjct: 613 SALQKVLYKH-MQKGLLLDGKTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDAR 671
Query: 599 --SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDG 656
S L SGKL+LL +++ KL+ GHRVL++ Q M+ ++ED+L QY R+DG
Sbjct: 672 FISAVDLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDG 731
Query: 657 KVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMA 716
ER +D+FNA NS F F+LSTRAGGLG+NL TADTVII+DSDWNPH D+QA
Sbjct: 732 STKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQD 791
Query: 717 RAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
RAHR+GQ +V +FRLIT S+EE+++ + K+ ++ V+ K N
Sbjct: 792 RAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGKFDN 839
Score = 45 (20.9 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 152 EFLKAFKSNP-----RLRTKVNNFHRQMSSNNNAEE 182
E+L+ K +P R KV NFH S +A E
Sbjct: 166 EYLQELKRHPDRAILEKRRKVTNFHFLQSLTKHARE 201
Score = 43 (20.2 bits), Expect = 3.3e-73, Sum P(2) = 3.3e-73
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 151 KEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEY 209
+EF + K N TKV +Q +N N ++ E + +++ ++DE+ Y
Sbjct: 200 REFKEFHKRNMLNHTKVRKSMQQYITNENKRIAREEMKNEKNRIQKLI----QEDEEGY 254
Score = 37 (18.1 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 5/15 (33%), Positives = 12/15 (80%)
Query: 11 RSDRKPIYQLDESDD 25
+ D++ +Y L+++DD
Sbjct: 261 KKDQRLVYLLEQTDD 275
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 467 (169.5 bits), Expect = 5.0e-73, Sum P(2) = 5.0e-73
Identities = 91/194 (46%), Positives = 134/194 (69%)
Query: 567 ISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFK---QLLESSGKLQLLDKMMVKLKEQ 623
+ L N++M LRK C HPY++E P I+ + FK +L+ +SGK +LD+M+ +LK +
Sbjct: 536 LKLQNIMMLLRKCCNHPYLIE--YP-IDPVTQEFKVDEELVTNSGKFLILDRMLPELKTR 592
Query: 624 GHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 683
GH+VL++SQ MLD+L DY F+ + + R+DG + +ER+ I FN + F FL+S
Sbjct: 593 GHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNT-DPDVFIFLVS 651
Query: 684 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMM 743
TRAGGLGINL ADTVIIYDSDWNP +DLQA R HR+GQT V+++RL+T +I+++++
Sbjct: 652 TRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIV 711
Query: 744 QMTKKKMVLEHLVV 757
+ K LE L++
Sbjct: 712 ERAAAKRKLEKLII 725
Score = 345 (126.5 bits), Expect = 5.0e-73, Sum P(2) = 5.0e-73
Identities = 117/413 (28%), Positives = 187/413 (45%)
Query: 150 EKEFLKAFKSNPRLRTKVNNFHRQMSSNN-NAEEDFVAIRPEWTTVDRILACRGEDDEKE 208
E++ L+ K +L K + N+ +A E+ I+ + D E KE
Sbjct: 66 EQQQLEEQKKKEKLERKKESLKVTKDKNSIDASEENAVIKKKRGREDESYNI-SEVMSKE 124
Query: 209 YLVKYKELSYDECYWEYESD---ISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTEST 265
++ + + E E S + Q + KI+ R ++ K V +
Sbjct: 125 EILSVAKKNKKENEDESSSSNMCVEDLQKNKDSNSKIKDRLSQTVRQNTKFFFDPVRKCN 184
Query: 266 KKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFL 325
+P FQQ P+ +GG + YQ+EG+ +LR W + ILADEMGLGKT+Q IA +
Sbjct: 185 GQPVPFQQ----PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATI 240
Query: 326 ASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXX 384
A + + P LV PLSTL NW EF + P++ ++Y GT Q R I+ ++
Sbjct: 241 ALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPEIPTMLYHGTQQERRILVKH--IHERK 298
Query: 385 XXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKD 444
+DR Y +++ + +K +K C ++ E R N D
Sbjct: 299 GTLQIHPVVITSFEIAMRDRTTLQNCYWKYLIVD-EGHRIKNMK--CRLIRELKRF-NAD 354
Query: 445 SKLF--SSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQE 502
+KL + Q + L L + D+L + D SL E E+ +E
Sbjct: 355 NKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFD---ITSLSETAEDIIAKERE 411
Query: 503 EQISR-LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
+ + LH++L P LLRR+K DV E+PPK+E+++ LS KQ+ +Y AI+ R
Sbjct: 412 QNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR 464
Score = 40 (19.1 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 211 VKYKELSYDECYWEYESDISAFQPEIER 238
V Y ++ D+ E E IS QPE++R
Sbjct: 494 VDYSKI--DDFPNELEKLISQIQPEVDR 519
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 564 (203.6 bits), Expect = 8.2e-72, Sum P(2) = 8.2e-72
Identities = 118/271 (43%), Positives = 170/271 (62%)
Query: 499 INQEEQ---ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRN 555
+N+EE I RLH++L P L RR+KKDV KELP K E +++ LS Q + Y+ +
Sbjct: 1073 LNEEEALLIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHG 1132
Query: 556 YQILT-RRGGAQIS-LINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLL 613
+ +G I L N VM+L+K+C HP++ E VE I+ + + L ++GK +LL
Sbjct: 1133 MLFVDGEKGKTGIKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELL 1192
Query: 614 DKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAK 673
D+++ KL GH+ L++ Q ++ ++EDYL K W+Y R+DG +R + +FN
Sbjct: 1193 DRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDP 1252
Query: 674 NSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLI 733
S + F+LSTRAGGLG+NL TADTVII+D+DWNPH DLQA RAHR+GQT +V I RLI
Sbjct: 1253 KSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLI 1312
Query: 734 TRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
T SIEE ++ + K+ L+ V+ K N
Sbjct: 1313 TEKSIEENILSRAQYKLDLDGKVIQAGKFDN 1343
Score = 317 (116.6 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 83/205 (40%), Positives = 115/205 (56%)
Query: 362 VMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIK-FDVLLTSYEMINLD 420
++ V S N I E+E + P Q R F+VLLT++E I D
Sbjct: 922 LIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRSSNFNVLLTTFEYIIKD 981
Query: 421 SASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQY-STRHRVLLTGTPLQNNLDELFMLMH 479
L IKW MI+DEGHR+KN SKL S+L Y +++R++LTGTPLQNNL EL+ L++
Sbjct: 982 RPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLN 1041
Query: 480 FLDAGKFGSLEEFQEEF---------KD---INQEEQ---ISRLHRMLAPHLLRRVKKDV 524
F+ F S++ F E F +D +N+EE I RLH++L P L RR+KKDV
Sbjct: 1042 FVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDV 1101
Query: 525 MKELPPKKELILRVELSSKQKEYYK 549
KELP K E +++ LS Q + Y+
Sbjct: 1102 EKELPDKVEKVIKCPLSGLQLKLYQ 1126
Score = 237 (88.5 bits), Expect = 8.2e-72, Sum P(2) = 8.2e-72
Identities = 84/282 (29%), Positives = 128/282 (45%)
Query: 111 RPTVAGDSDVSKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFL-KAFKSNPRL--RTK- 166
R T+ + V L KQ K K L++L + K + K K N R K
Sbjct: 688 RQTMQEANLVLALAEKQKTEHAMRQKEKLLTHLRSIMLHRKSIVTKVDKQNKAKTQRCKD 747
Query: 167 VNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYE 226
+ NFH + R E + R+ A R DDE YL + + + D
Sbjct: 748 IINFHAHLEKEEKK-------RIERSARQRLQALRA-DDEAAYL-QLLDKAKDTRITHLL 798
Query: 227 SDISAFQPEIERFIKIQ-SRSHRSSCNKQKSSPQD----VTESTKKPKEFQQ----YEH- 276
+ + R ++IQ S H + + + S+ + ++E K F+ +E
Sbjct: 799 KQTDQYLENLTRAVRIQQSNIHSGNTSGKGSNSAELEAPISEEDKNLDYFKVAHRIHEEV 858
Query: 277 -SPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS- 334
P+ GG+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IAF+ L ++
Sbjct: 859 EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQ 918
Query: 335 -PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIR 375
P L++ PLSTL NW EF WAP + + Y G Q R ++
Sbjct: 919 GPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQ 960
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 431 (156.8 bits), Expect = 1.2e-71, Sum P(3) = 1.2e-71
Identities = 87/174 (50%), Positives = 126/174 (72%)
Query: 599 SFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKV 658
SF + L SGKLQ+LDK++ LK GHRVLIYSQF M+++LED++ F+K++Y R+DG
Sbjct: 1758 SFSKSLNDSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSS 1817
Query: 659 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
+R+ +D F + + S F FLLSTRA G+GINL +ADTVI YDSDWNP D QA RA
Sbjct: 1818 KLDDRRDMVDDFQS-DPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRA 1876
Query: 719 HRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKA--QNINQV 768
HRLGQT V ++RLIT+ +IEE++++ K+K ++ +V+ G+ ++ + ++QV
Sbjct: 1877 HRLGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFESNPEELDQV 1930
Score = 394 (143.8 bits), Expect = 1.2e-71, Sum P(3) = 1.2e-71
Identities = 112/323 (34%), Positives = 169/323 (52%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHL 337
P L+ L PYQL+G+ ++ + + + ILADEMGLGKTIQSIA LA L E+
Sbjct: 1155 PTILNA-DLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVLAHLAEEKN---- 1209
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXX 397
+ P + + W + +V A +I Y+
Sbjct: 1210 IWGPFLIVTP-KSTLHNWKNEF--AKFV---PAFKVIP----YWGTQQQRTTIRKYWNPK 1259
Query: 398 XXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTR 457
++ F VL+TSY +I D ++WQ M++DE H +K+ S + +L ++ R
Sbjct: 1260 KLYHRNS-PFHVLITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCR 1318
Query: 458 HRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISR 507
+R+LLTGTP+QN++ EL+ L+HF+ F S +EF E F KDI E Q++R
Sbjct: 1319 NRLLLTGTPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQLNR 1378
Query: 508 LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQI 567
LH +L P +LRR+K+DV E+P K E+ + L+ +QK+ Y++I + N I GGA
Sbjct: 1379 LHMILKPFMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRS-NISITELLGGASF 1437
Query: 568 S-------LINVVMELRKLCCHP 583
S L+N VM+ RK+C HP
Sbjct: 1438 SEQGSMKALMNFVMQFRKVCNHP 1460
Score = 44 (20.5 bits), Expect = 1.2e-71, Sum P(3) = 1.2e-71
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 165 TKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEK 207
+K + ++ SS+++ +D IRP + D + + EDDE+
Sbjct: 765 SKSSKYNSSSSSSSSRSKDNKYIRPSIFSSDDDFS-KDEDDEE 806
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 468 (169.8 bits), Expect = 4.9e-71, Sum P(2) = 4.9e-71
Identities = 98/247 (39%), Positives = 155/247 (62%)
Query: 518 RRVKKDV----MKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVV 573
RR +K + + + P + E ++ +E +A++ N + + + L N++
Sbjct: 511 RRARKSINYSKIDDFPNELEKLISQMQPEVDRE--RAVVETNIPVESE---VNLKLQNIM 565
Query: 574 MELRKLCCHPYMLEGVEPDIEDTNESFK---QLLESSGKLQLLDKMMVKLKEQGHRVLIY 630
M LRK C HPY++E P I+ + FK +L+ +SGK +LD+M+ +LK +GH+VL++
Sbjct: 566 MLLRKCCNHPYLIE--YP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKVLLF 622
Query: 631 SQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLG 690
SQ MLD+L DY F+ + + R+DG + +ER+ + FN + F FL+STRAGGLG
Sbjct: 623 SQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNT-DPDVFIFLVSTRAGGLG 681
Query: 691 INLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKM 750
INL ADTVIIYDSDWNP +DLQA R HR+GQT V+++RL+T +I++++++ K
Sbjct: 682 INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKR 741
Query: 751 VLEHLVV 757
LE L++
Sbjct: 742 KLEKLII 748
Score = 326 (119.8 bits), Expect = 4.9e-71, Sum P(2) = 4.9e-71
Identities = 95/299 (31%), Positives = 145/299 (48%)
Query: 261 VTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQ 320
V + +P FQQ P+ +GG + YQ+EG+ +LR W + ILADEMGLGKT+Q
Sbjct: 203 VRKCNGQPVPFQQ----PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQ 258
Query: 321 SIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARN-IIREYE 378
IA +A + + P LV PLSTL NW EF + P + ++Y GT Q R +++
Sbjct: 259 CIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIH 318
Query: 379 FYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGH 438
+DR Y +++ + +K +K C ++ E
Sbjct: 319 ---KRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVD-EGHRIKNMK--CRLIRELK 372
Query: 439 RLKNKDSKLF--SSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF 496
R N D+KL + Q + L L + D+L + D SL E E+
Sbjct: 373 RF-NADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFD---ITSLSETAEDI 428
Query: 497 KDINQEEQISR-LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
+E+ + LH++L P LLRR+K DV E+PPK+E+++ LS KQ+ +Y AI+ R
Sbjct: 429 IAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR 487
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 464 (168.4 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 98/247 (39%), Positives = 154/247 (62%)
Query: 518 RRVKKDV----MKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVV 573
RR +K + + + P + E ++ +E +A++ N + + + L N++
Sbjct: 510 RRTRKSIDYSKIDDFPNELEKLISQIQPEVDRE--RAVVETNIPVESE---VNLKLQNIM 564
Query: 574 MELRKLCCHPYMLEGVEPDIEDTNESFK---QLLESSGKLQLLDKMMVKLKEQGHRVLIY 630
M LRK C HPY++E P I+ + FK +L+ +SGK +LD+M+ +LK +GH+VL++
Sbjct: 565 MLLRKCCNHPYLIE--YP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKIRGHKVLLF 621
Query: 631 SQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLG 690
SQ MLD+L DY F+ + + R+DG + ER+ + FN + F FL+STRAGGLG
Sbjct: 622 SQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNT-DPDVFIFLVSTRAGGLG 680
Query: 691 INLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKM 750
INL ADTVIIYDSDWNP +DLQA R HR+GQT V+++RL+T +I++++++ K
Sbjct: 681 INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKR 740
Query: 751 VLEHLVV 757
LE L++
Sbjct: 741 KLEKLII 747
Score = 325 (119.5 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 94/298 (31%), Positives = 145/298 (48%)
Query: 261 VTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQ 320
V + +P FQQ P+ +GG + YQ+EG+ +LR W + ILADEMGLGKT+Q
Sbjct: 202 VRKCNGQPVPFQQ----PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQ 257
Query: 321 SIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEF 379
IA +A + + P LV PLSTL NW EF + P++ ++Y G+ Q R + +
Sbjct: 258 CIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNH-- 315
Query: 380 YFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHR 439
+DR Y +++ + +K +K C ++ E R
Sbjct: 316 IHKRKGTLQIHPVVITSFEIAMRDRNVLQHCYWKYLIVD-EGHRIKNMK--CRLIRELKR 372
Query: 440 LKNKDSKLF--SSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK 497
N D+KL + Q + L L + D+L + D SL E E+
Sbjct: 373 F-NADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFD---ITSLSETAEDII 428
Query: 498 DINQEEQISR-LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
+E+ + LH++L P LLRR+K DV E+PPK+E+++ LS KQ+ +Y AI+ R
Sbjct: 429 AKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEVFYTAIVNR 486
>TAIR|locus:2054011 [details] [associations]
symbol:CHR8 "chromatin remodeling 8" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0010332 "response to
gamma radiation" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0010332 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AC005724 HOGENOM:HOG000170952 KO:K10841 IPI:IPI00524515
PIR:C84568 RefSeq:NP_179466.1 UniGene:At.39947
ProteinModelPortal:Q9ZV43 SMR:Q9ZV43 STRING:Q9ZV43 PaxDb:Q9ZV43
PRIDE:Q9ZV43 EnsemblPlants:AT2G18760.1 GeneID:816391
KEGG:ath:AT2G18760 TAIR:At2g18760 InParanoid:Q9ZV43 OMA:TETSNIF
PhylomeDB:Q9ZV43 ProtClustDB:CLSN2683061 ArrayExpress:Q9ZV43
Genevestigator:Q9ZV43 Uniprot:Q9ZV43
Length = 1187
Score = 592 (213.5 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 139/378 (36%), Positives = 215/378 (56%)
Query: 409 VLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQ 468
+L+T+YE + L L I+W ++DEGHR++N +S + KQ T HR+++TG P+Q
Sbjct: 519 LLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQ 578
Query: 469 NNLDELFMLMHFLDAGKFGSLEEFQEEFKD-------INQEE-QISRLHR-------MLA 513
N L EL+ L F+ GK G L F+ EF N Q+S +R ++
Sbjct: 579 NKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIM 638
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVV 573
P+LLRR+K DV L K E +L L+ +Q+ Y+A L + ++ G + SL +
Sbjct: 639 PYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASS-EVEQIFDGNRNSLYGID 697
Query: 574 MELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQF 633
+ +RK+C HP +LE + N + E SGK++++ +++ K+QGHRVL++SQ
Sbjct: 698 V-MRKICNHPDLLER---EHSHQNPDYGNP-ERSGKMKVVAEVLKVWKQQGHRVLLFSQT 752
Query: 634 QHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 693
Q MLD+LE +L ++ Y R+DG +R ID FN + F F+L+T+ GGLG NL
Sbjct: 753 QQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFN-NSEDMFVFVLTTKVGGLGTNL 811
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
A+ VII+D DWNP D+QA RA R+GQ V ++RLITRG+IEE++ + + +
Sbjct: 812 TGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYH----RQIYK 867
Query: 754 HLVVGRLKAQNINQVTIF 771
H + ++ +N Q F
Sbjct: 868 HFLTNKI-LKNPQQRRFF 884
Score = 159 (61.0 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 249 SSCNKQKSSP-QDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHV 307
SSC +++ D ++ + + + + PE + L YQ G+ +L ++
Sbjct: 348 SSCEEEELDDFDDADDNERSSVQLEGGLNIPECIFR-KLFDYQRVGVQWLWELHCQRAGG 406
Query: 308 ILADEMGLGKTIQSIAFLASL-FGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 366
I+ DEMGLGKTIQ ++FL SL F + P +++ P++ LR W RE W P +V +
Sbjct: 407 IIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVTLLRQWRREAQKWYPDFHVEILHD 466
Query: 367 TSQ 369
++Q
Sbjct: 467 SAQ 469
Score = 40 (19.1 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 249 SSCNKQKSSPQDVTESTKKPK--EFQQYEHSPEFLSGGSL-HPYQLEGLNFLR 298
+S N + + + E+TKKP E E L G +L Q E LN LR
Sbjct: 16 TSANPEDLEQKILDEATKKPDNDEGGSVEEKSTQLEGTNLLSSSQNELLNKLR 68
Score = 39 (18.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 434 VDEGHRLKNKDSKLFSSL 451
VD H K+K++K + SL
Sbjct: 491 VDSDHEPKSKNTKKWDSL 508
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 445 (161.7 bits), Expect = 2.7e-70, Sum P(3) = 2.7e-70
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1104 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1163
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1164 SERRDMVADFQTRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1222
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1223 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1269
Score = 367 (134.2 bits), Expect = 2.7e-70, Sum P(3) = 2.7e-70
Identities = 101/278 (36%), Positives = 146/278 (52%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L ER + + P
Sbjct: 525 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL-AEREN---IWGPFL 580
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ W + +V + Y+ QD
Sbjct: 581 IISP-ASTLNNWHQEFT--RFVPKFKVLP-------YWGNPHDRKVIRRFWSQKTLYTQD 630
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
F V++TSY+++ D + +KWQ M++DE LK+ S + L Q+ R+R+LLT
Sbjct: 631 A-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 689
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRMLA 513
GTP+QN + EL+ L+HF+ F S EEF E F KDI E Q+SRLH +L
Sbjct: 690 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 749
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
P +LRR+KKDV EL K E+++ +L+S+QK Y+A+
Sbjct: 750 PFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQAL 787
Score = 37 (18.1 bits), Expect = 2.7e-70, Sum P(3) = 2.7e-70
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 267 KPKEFQQYEHSPEFLSGGSLHPY 289
K KE QQY+ + S G L Y
Sbjct: 185 KEKELQQYQ----YYSAGLLSTY 203
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 459 (166.6 bits), Expect = 2.7e-70, Sum P(2) = 2.7e-70
Identities = 97/247 (39%), Positives = 155/247 (62%)
Query: 518 RRVKKDV----MKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVV 573
RR +K + + + P + E ++ +E +A++ N + + + L N++
Sbjct: 510 RRTRKSINYSKIDDFPNELEKLISQIQPEVDRE--RAVVEVNIPVESE---VNLKLQNIM 564
Query: 574 MELRKLCCHPYMLEGVEPDIEDTNESFK---QLLESSGKLQLLDKMMVKLKEQGHRVLIY 630
M LRK C HPY++E P I+ + FK +L+ +SGK +LD+M+ +LK++GH+VL++
Sbjct: 565 MLLRKCCNHPYLIE--YP-IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLF 621
Query: 631 SQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLG 690
SQ MLD+L DY + + + R+DG + +ER+ + FN + F FL+STRAGGLG
Sbjct: 622 SQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLG 680
Query: 691 INLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKM 750
INL ADTVIIYDSDWNP +DLQA R HR+GQT V+++RL+T +I++++++ K
Sbjct: 681 INLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKR 740
Query: 751 VLEHLVV 757
LE L++
Sbjct: 741 KLEKLII 747
Score = 329 (120.9 bits), Expect = 2.7e-70, Sum P(2) = 2.7e-70
Identities = 95/299 (31%), Positives = 146/299 (48%)
Query: 261 VTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQ 320
V + +P FQQ P+ +GG + YQ+EG+ +LR W + ILADEMGLGKT+Q
Sbjct: 202 VRKCNGQPVPFQQ----PKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQ 257
Query: 321 SIAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARN-IIREYE 378
IA +A + + P LV PLSTL NW EF + P + ++Y GT + R ++R
Sbjct: 258 CIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNI- 316
Query: 379 FYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGH 438
+ +DR Y +++ + +K +K C ++ E
Sbjct: 317 --YKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVD-EGHRIKNMK--CRLIRELK 371
Query: 439 RLKNKDSKLF--SSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF 496
R N D+KL + Q + L L + D+L + D SL E E+
Sbjct: 372 RF-NADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFD---ITSLSETAEDI 427
Query: 497 KDINQEEQISR-LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
+E+ + LH++L P LLRR+K DV E+PPK+E+++ LS KQ+ +Y AI+ R
Sbjct: 428 IAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNR 486
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 445 (161.7 bits), Expect = 4.3e-70, Sum P(3) = 4.3e-70
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1097 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1156
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1157 SERRDMVADFQTRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1215
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1216 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1262
Score = 364 (133.2 bits), Expect = 4.3e-70, Sum P(3) = 4.3e-70
Identities = 101/278 (36%), Positives = 145/278 (52%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L ER + + P
Sbjct: 518 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL-AEREN---IWGPFL 573
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ W + +V + Y+ QD
Sbjct: 574 IISP-ASTLNNWHQEFT--RFVPKFKVLP-------YWGNPHDRKVIRRFWSQKTLYTQD 623
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
F V++TSY+++ D + +KWQ M++DE LK+ S + L Q+ R+R+LLT
Sbjct: 624 A-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 682
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRMLA 513
GTP+QN + EL+ L+HF+ F S EEF E F KDI E Q+SRLH +L
Sbjct: 683 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 742
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
P +LRR+KKDV EL K E++ +L+S+QK Y+A+
Sbjct: 743 PFMLRRIKKDVENELSDKIEILTYCQLTSRQKLLYQAL 780
Score = 38 (18.4 bits), Expect = 4.3e-70, Sum P(3) = 4.3e-70
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 282 SGGSLHPYQLEGL 294
S G L+PY L G+
Sbjct: 89 SSGLLNPYSLNGV 101
Score = 37 (18.1 bits), Expect = 5.4e-70, Sum P(3) = 5.4e-70
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 267 KPKEFQQYEHSPEFLSGGSLHPY 289
K KE QQY+ + S G L Y
Sbjct: 178 KDKELQQYQ----YYSAGLLSTY 196
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 443 (161.0 bits), Expect = 4.4e-70, Sum P(3) = 4.4e-70
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1094 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1153
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1154 SERRDMVADFQNRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1212
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1213 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1259
Score = 367 (134.2 bits), Expect = 4.4e-70, Sum P(3) = 4.4e-70
Identities = 101/278 (36%), Positives = 146/278 (52%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L ER + + P
Sbjct: 516 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL-AEREN---IWGPFL 571
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ W + +V + Y+ QD
Sbjct: 572 IISP-ASTLNNWHQEFT--RFVPKFKVLP-------YWGNPHDRKVIRRFWSQKTLYTQD 621
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
F V++TSY+++ D + +KWQ M++DE LK+ S + L Q+ R+R+LLT
Sbjct: 622 A-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 680
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRMLA 513
GTP+QN + EL+ L+HF+ F S EEF E F KDI E Q+SRLH +L
Sbjct: 681 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 740
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
P +LRR+KKDV EL K E+++ +L+S+QK Y+A+
Sbjct: 741 PFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQAL 778
Score = 37 (18.1 bits), Expect = 4.4e-70, Sum P(3) = 4.4e-70
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 267 KPKEFQQYEHSPEFLSGGSLHPY 289
K KE QQY+ + S G L Y
Sbjct: 176 KDKELQQYQ----YYSAGLLSTY 194
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 443 (161.0 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1098 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1157
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1158 SERRDMVADFQNRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1216
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1217 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1263
Score = 367 (134.2 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 101/278 (36%), Positives = 146/278 (52%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L ER + + P
Sbjct: 519 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL-AEREN---IWGPFL 574
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ W + +V + Y+ QD
Sbjct: 575 IISP-ASTLNNWHQEFT--RFVPKFKVLP-------YWGNPHDRKVIRRFWSQKTLYTQD 624
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
F V++TSY+++ D + +KWQ M++DE LK+ S + L Q+ R+R+LLT
Sbjct: 625 A-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 683
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRMLA 513
GTP+QN + EL+ L+HF+ F S EEF E F KDI E Q+SRLH +L
Sbjct: 684 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 743
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
P +LRR+KKDV EL K E+++ +L+S+QK Y+A+
Sbjct: 744 PFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQAL 781
Score = 37 (18.1 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 267 KPKEFQQYEHSPEFLSGGSLHPY 289
K KE QQY+ + S G L Y
Sbjct: 179 KDKELQQYQ----YYSAGLLSTY 197
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 443 (161.0 bits), Expect = 4.6e-70, Sum P(3) = 4.6e-70
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1104 ESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1163
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1164 SERRDMVADFQNRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1222
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1223 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1269
Score = 367 (134.2 bits), Expect = 4.6e-70, Sum P(3) = 4.6e-70
Identities = 101/278 (36%), Positives = 146/278 (52%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L ER + + P
Sbjct: 525 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL-AEREN---IWGPFL 580
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQD 403
+ W + +V + Y+ QD
Sbjct: 581 IISP-ASTLNNWHQEFT--RFVPKFKVLP-------YWGNPHDRKVIRRFWSQKTLYTQD 630
Query: 404 RIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
F V++TSY+++ D + +KWQ M++DE LK+ S + L Q+ R+R+LLT
Sbjct: 631 A-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLT 689
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRMLA 513
GTP+QN + EL+ L+HF+ F S EEF E F KDI E Q+SRLH +L
Sbjct: 690 GTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILK 749
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
P +LRR+KKDV EL K E+++ +L+S+QK Y+A+
Sbjct: 750 PFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQAL 787
Score = 51 (23.0 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 24/72 (33%), Positives = 34/72 (47%)
Query: 490 EEFQEEFKDINQEEQ---ISR--LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQ 544
E+ +EE +D +EE+ +SR LH ML H + KK + KEL +Q
Sbjct: 143 EDNEEEEEDDEEEEEELNLSREELHNMLRLH---KYKKLHQNKYSKDKEL--------QQ 191
Query: 545 KEYYKAILTRNY 556
+YY A L Y
Sbjct: 192 YQYYSAGLLSTY 203
Score = 37 (18.1 bits), Expect = 4.6e-70, Sum P(3) = 4.6e-70
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 267 KPKEFQQYEHSPEFLSGGSLHPY 289
K KE QQY+ + S G L Y
Sbjct: 185 KDKELQQYQ----YYSAGLLSTY 203
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 568 (205.0 bits), Expect = 5.3e-70, Sum P(4) = 5.3e-70
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 932 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 991
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 992 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1051
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1052 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1111
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1112 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1171
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1172 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1206
Score = 305 (112.4 bits), Expect = 1.1e-37, Sum P(5) = 1.1e-37
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 829 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 888
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 889 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 948
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 949 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 986
Score = 205 (77.2 bits), Expect = 5.3e-70, Sum P(4) = 5.3e-70
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 717 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 776
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 777 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 818
Score = 45 (20.9 bits), Expect = 5.3e-70, Sum P(4) = 5.3e-70
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTK-KPKEFQQYEHSPEFL 281
P +++ + Q + + +Q PQ + T+ +P++ QQ + P L
Sbjct: 213 PGMQQQQQQQQQQQQQQQQQQPQQPQQPQQQTQAQPQQQQQQQQQPPAL 261
Score = 42 (19.8 bits), Expect = 1.1e-37, Sum P(5) = 1.1e-37
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1325 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1352
Score = 37 (18.1 bits), Expect = 5.3e-70, Sum P(4) = 5.3e-70
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 772 FQTWRLLSC 780
++TWR +SC
Sbjct: 1436 WETWRKMSC 1444
>SGD|S000003796 [details] [associations]
symbol:RAD26 "Protein involved in transcription-coupled
nucleotide excision repair" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IGI;IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000003796 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006283 GO:GO:0008094
GeneTree:ENSGT00590000083118 HOGENOM:HOG000170952 KO:K10841
EMBL:X81635 EMBL:L26910 EMBL:Z49535 PIR:JC2227 RefSeq:NP_012569.1
ProteinModelPortal:P40352 SMR:P40352 DIP:DIP-3008N IntAct:P40352
MINT:MINT-439055 STRING:P40352 PaxDb:P40352 PeptideAtlas:P40352
EnsemblFungi:YJR035W GeneID:853492 KEGG:sce:YJR035W CYGD:YJR035w
OMA:DENRIME OrthoDB:EOG44TSGZ NextBio:974125 Genevestigator:P40352
GermOnline:YJR035W Uniprot:P40352
Length = 1085
Score = 593 (213.8 bits), Expect = 8.6e-70, Sum P(2) = 8.6e-70
Identities = 148/421 (35%), Positives = 240/421 (57%)
Query: 403 DRIKFD--VLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
D++ D +L+T+Y + + S L +KWQ ++DEGH+++N DS++ + K+ T +R+
Sbjct: 435 DKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRI 494
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-DIN-------QEEQISR----- 507
+L+GTP+QNNL EL+ L F+ GK G+L FQ++F IN Q+
Sbjct: 495 ILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCA 554
Query: 508 --LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA 565
L +++P+LLRRVK DV K+LP KKE++L +L+ Q+ Y L + + + G
Sbjct: 555 VALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFL-HSSDLNQIQNGK 613
Query: 566 QISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGH 625
+ L + + LRK+C HP +L+ D + N + + SGK+Q++ ++++ +QG+
Sbjct: 614 RNVLFGIDI-LRKICNHPDLLDR---DTKRHNPDYGDP-KRSGKMQVVKQLLLLWHKQGY 668
Query: 626 RVLIYSQFQHMLDLLEDYLTFKK-----WQYERIDGKVGGAERQIRIDRFNAKNSSRFCF 680
+ L+++Q + MLD+LE++++ K Y R+DG RQ +DRFN N S F
Sbjct: 669 KALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN--NESFDVF 726
Query: 681 LLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEE 740
LL+TR GGLG+NL A+ +II+D DWNP D+QA RA R+GQ +V I+RL+ GSIEE
Sbjct: 727 LLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEE 786
Query: 741 RMMQMTKKKMVLEHLVVGRLKAQN---INQVTIFFQTWRLLSCSVEGILELVFLWTRSWK 797
++ K L + ++ K + I+++ F S E + E V T + K
Sbjct: 787 KIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSLGGENGYSTEELNEEVQKHTENLK 846
Query: 798 N 798
N
Sbjct: 847 N 847
Score = 150 (57.9 bits), Expect = 8.6e-70, Sum P(2) = 8.6e-70
Identities = 50/174 (28%), Positives = 84/174 (48%)
Query: 203 EDDEKE-----YLVKYKELSYDECYWEYESDISA--FQPEIERFIKIQSRSHRSSCNKQK 255
EDDE+E L + ++L + E + D +Q +++++K + SC Q+
Sbjct: 211 EDDEEEENDDKILKELEDLRFRGQPGEAKDDGDELYYQERLKKWVK------QRSCGSQR 264
Query: 256 SSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHP----YQLEGLNFLRFSWSKQTHVILAD 311
SS D+ E + + + +F G ++ YQ + +L + + I+ D
Sbjct: 265 SS--DLPEWRRPHPNIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGD 322
Query: 312 EMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWEREFATWAPQMNVVM 363
EMGLGKTIQ IAF+A+L G P L+V P + ++ W EF W P + V+
Sbjct: 323 EMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTVI 376
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 567 (204.7 bits), Expect = 9.5e-70, Sum P(2) = 9.5e-70
Identities = 120/276 (43%), Positives = 180/276 (65%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
++N+EE I RLH++L P LLRR+KK+V +LP K E I++ ++S+ Q+ YK + ++
Sbjct: 974 ELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSK 1033
Query: 555 NYQILTR--------RGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNE-----SFK 601
+LT +GGA+ +L+N +++LRKLC HP+M + +E D S
Sbjct: 1034 GV-LLTDGSEKGKHGKGGAK-ALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGP 1091
Query: 602 QLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGA 661
L SGK +LLD+++ KLK HRVL++ Q + ++EDYL ++++ Y R+DG
Sbjct: 1092 DLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAE 1151
Query: 662 ERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 721
+R + +FNAK S F FLLSTRAGGLG+NL TADTV+I+DSDWNPH DLQA RAHR+
Sbjct: 1152 DRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRI 1211
Query: 722 GQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
GQ N+V + RL+T S+EER++ + K+ ++ V+
Sbjct: 1212 GQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVI 1247
Score = 311 (114.5 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 81/214 (37%), Positives = 118/214 (55%)
Query: 362 VMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRI-KFDVLLTSYEMINLD 420
++ V S N + E+E + P Q R KF+VLLT+YE + D
Sbjct: 826 LIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKD 885
Query: 421 SASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTGTPLQNNLDELFMLMH 479
A L I+W+ MI+DEGHR+KN KL L Y +R+LLTGTPLQN L EL+ L++
Sbjct: 886 KAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLN 945
Query: 480 FLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRMLAPHLLRRVKKDVMK 526
FL F S F++ F ++N+EE I RLH++L P LLRR+KK+V
Sbjct: 946 FLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEH 1005
Query: 527 ELPPKKELILRVELSSKQKEYYKAILTRNYQILT 560
+LP K E I++ ++S+ Q+ YK + ++ +LT
Sbjct: 1006 QLPDKVEYIIKCDMSALQRVLYKHMQSKGV-LLT 1038
Score = 213 (80.0 bits), Expect = 9.5e-70, Sum P(2) = 9.5e-70
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER--ISPHLVVAP 341
G+L YQ++GL +L ++ + ILADEMGLGKTIQ+I+ + L + + P+L++ P
Sbjct: 771 GTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVP 830
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQARNIIR 375
LSTL NW EF WAP + VV Y G+ Q R +++
Sbjct: 831 LSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQ 864
Score = 46 (21.3 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/73 (21%), Positives = 31/73 (42%)
Query: 435 DEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGS-LEEFQ 493
D HR+ ++ L ++ +L + N+DE + D GS ++F
Sbjct: 1206 DRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFL 1265
Query: 494 EEF--KDINQEEQ 504
+ +D N+EE+
Sbjct: 1266 QTILHQDDNEEEE 1278
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 568 (205.0 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 932 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 991
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 992 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1051
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1052 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1111
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1112 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1171
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1172 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1206
Score = 305 (112.4 bits), Expect = 4.5e-38, Sum P(4) = 4.5e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 829 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 888
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 889 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 948
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 949 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 986
Score = 205 (77.2 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 717 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 776
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 777 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 818
Score = 45 (20.9 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 234 PEIERFIKIQSRSHRSSCNKQKSSPQDVTESTK-KPKEFQQYEHSPEFL 281
P +++ + Q + + +Q PQ + T+ +P++ QQ + P L
Sbjct: 213 PGMQQQQQQQQQQQQQQQQQQPQQPQQPQQQTQAQPQQQQQQQQQPPAL 261
Score = 42 (19.8 bits), Expect = 4.5e-38, Sum P(4) = 4.5e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1325 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1352
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1428 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1458
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 444 (161.4 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1102 ESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1161
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1162 SERRDMVADFQNRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1220
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1221 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1267
Score = 362 (132.5 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 101/280 (36%), Positives = 148/280 (52%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISPHLVVAPLS 343
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L ER + + P
Sbjct: 521 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHL-AEREN---IWGPFL 576
Query: 344 TLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEF--YFPXXXXXXXXXXXXXXXXXXX 401
+ W + AR + +++ Y+
Sbjct: 577 IISP-ASTLNNWHQEF----------AR-FVPKFKVLPYWGNPHDRKVIRKFWSQKTLYT 624
Query: 402 QDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVL 461
QD F V++TSY+++ D + +KWQ M++DE LK+ S + L Q+ R+R+L
Sbjct: 625 QDA-PFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLL 683
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQ---------EEQISRLHRM 511
LTGTP+QN + EL+ L+HF+ F S EEF E F KDI E Q+SRLH +
Sbjct: 684 LTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMI 743
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAI 551
L P +LRR+KKDV EL K E+++ + +S+QK Y+A+
Sbjct: 744 LKPFMLRRIKKDVENELSDKIEILMYCQQTSRQKLLYQAL 783
Score = 37 (18.1 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 267 KPKEFQQYEHSPEFLSGGSLHPY 289
K KE QQY+ + S G L Y
Sbjct: 181 KDKELQQYQ----YYSAGLLSTY 199
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 188/511 (36%), Positives = 283/511 (55%)
Query: 260 DVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTI 319
D+TE K Q E P L+GG L YQL+G+ +L W + ILAD+MGLGKTI
Sbjct: 179 DLTEEETVIK--LQNELCP-LLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTI 235
Query: 320 QSIAFLASLFGERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYE 378
Q+I FL+ L G + P+LV+APLSTL NW E A + P +N ++Y G R+ +R
Sbjct: 236 QTIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRK- 294
Query: 379 FYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGH 438
+ P + Y +I+ + LK K C ++ E
Sbjct: 295 -HMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVVID-EGHRLKNHK--CKLLRELK 350
Query: 439 RLKNKDSKLF---SSLKQYSTRHRVLLTGT-P-LQNNLDELFMLMHFLDAGKFGSLEEFQ 493
LK D+KL + L+ + LL P + + DE F + K + +E +
Sbjct: 351 HLK-MDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEE 409
Query: 494 EEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT 553
E+ + + +S+LH +L P +LRR+K DV LP KKE+I+ ++ QK++ + ++
Sbjct: 410 EK----RRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVN 465
Query: 554 RNYQI-LTR---RG-GAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSG 608
+ L RG G + L N+V++LRK C HP +L+G + D ++++ G
Sbjct: 466 NTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQG-QIDGSYLYPPVEEIVGQCG 524
Query: 609 KLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRID 668
K +LL++++V+L H+VLI+SQ+ +LD+++ Y + K ++ RIDG V ER+ +I
Sbjct: 525 KFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIK 584
Query: 669 RFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVM 728
F+ + SS FLLSTRAGGLGINL ADT I+YDSDWNP DLQAM R HR+GQT V
Sbjct: 585 DFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVH 644
Query: 729 IFRLITRGSIEERMMQMTKKKMVLEHLVVGR 759
++RL T SIE R+++ K+ LEH+V+G+
Sbjct: 645 VYRLSTAQSIETRVLKRAYSKLKLEHVVIGQ 675
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 388 (141.6 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 104/302 (34%), Positives = 165/302 (54%)
Query: 529 PPKKELILRVE-LSSKQKEYYKAILTRNYQILTRRGGAQISLINVVM-ELRKLCCHPYML 586
P E ++++ + SK K ++ YQ + + + L N+ M +LR +C P++
Sbjct: 538 PSYDEALVKIRHIKSKTK-IQSILIDAIYQDILKEA-KHLKLQNLKMIQLRNICNSPFIY 595
Query: 587 EGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
P ++ +++ +S K Q+L++++ L GH+VLI++QF +LDLLED+L
Sbjct: 596 YNY-PILDQA-----EVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEE 649
Query: 647 KKWQYERIDGKVGGAERQIR---IDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIY 702
+ +I G QIR I +FN N+ +F FL STRAGGLGINL ADTVI+
Sbjct: 650 SPLSHGKICRLDGSTNHQIRDEQISQFN--NNPKFKVFLSSTRAGGLGINLVAADTVILM 707
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRL 760
D+DWNP DLQA+ R HR+GQ N V IFR + + SIEE ++ + K LE LV+ G+
Sbjct: 708 DNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSKRFLERLVIQMGQF 767
Query: 761 KAQNINQ----VTIFFQTWRLLS-CSVEGILELVFLWTRSWKNDVWVCDAVERARKLTIS 815
K N N+ T + + + S+ ++EL + +S +N D+ E K+ +S
Sbjct: 768 KFSNFNKKLTAATTSNEQGAIKNDWSINDMMELSKIHFKSTQNGQTSQDSAEEDEKILLS 827
Query: 816 KE 817
+
Sbjct: 828 DQ 829
Score = 233 (87.1 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 62/162 (38%), Positives = 94/162 (58%)
Query: 226 ESDISAFQPEIERFIKIQSRSHRSSCNKQ---KSSPQDVTESTKKPKE-FQQYEHS---- 277
ESD QP I++ K + +S ++ KQ ++++STK +E ++ ++S
Sbjct: 107 ESDT---QP-IKKRRKTKPKSKSTANGKQDIVSMLSTNISDSTKSTREAIEKSQNSSKIT 162
Query: 278 ----PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI 333
P+ ++GG L YQ++GL +L + + ILADEMGLGKT+Q I+FL+ L I
Sbjct: 163 NNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIENGI 222
Query: 334 S-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNII 374
+ P LVV P+STL NW E +AP++ V Y+GT Q RN I
Sbjct: 223 NGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDI 264
Score = 210 (79.0 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 408 DVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPL 467
+++LTSYE+ D L I W+ +IVDEGHRLKN L LK+ + +R+LLTGTPL
Sbjct: 274 NIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPL 333
Query: 468 QNNLDELFMLMHFLDAGKFGSLEEFQEEF 496
QNNL+EL+ L++F+ F LE FQ+ F
Sbjct: 334 QNNLNELWSLLNFILPDIFHDLELFQQWF 362
Score = 147 (56.8 bits), Expect = 9.9e-63, Sum P(3) = 9.9e-63
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 470 NLDELFMLMHFLDAGKFGSLEEFQEEFKDI---N-QEEQISRLHRMLAPHLLRRVKKDVM 525
N DEL L L+ G+ E EE K++ N QE I LH +L P +LRR+K+DV+
Sbjct: 363 NFDELTELAGELE----GTNNEEDEETKNLIKLNIQETLIKNLHTILKPFMLRRLKRDVI 418
Query: 526 KELPPKKELILRVELSSKQKE-YYKAI 551
K LPPKKE +L + ++ QK+ YY A+
Sbjct: 419 KNLPPKKEYLLHIPMTKLQKKIYYDAV 445
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 388 (141.6 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 104/302 (34%), Positives = 165/302 (54%)
Query: 529 PPKKELILRVE-LSSKQKEYYKAILTRNYQILTRRGGAQISLINVVM-ELRKLCCHPYML 586
P E ++++ + SK K ++ YQ + + + L N+ M +LR +C P++
Sbjct: 538 PSYDEALVKIRHIKSKTK-IQSILIDAIYQDILKEA-KHLKLQNLKMIQLRNICNSPFIY 595
Query: 587 EGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTF 646
P ++ +++ +S K Q+L++++ L GH+VLI++QF +LDLLED+L
Sbjct: 596 YNY-PILDQA-----EVIRNSAKFQVLNQLLPPLLSSGHKVLIFAQFTKVLDLLEDWLEE 649
Query: 647 KKWQYERIDGKVGGAERQIR---IDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIY 702
+ +I G QIR I +FN N+ +F FL STRAGGLGINL ADTVI+
Sbjct: 650 SPLSHGKICRLDGSTNHQIRDEQISQFN--NNPKFKVFLSSTRAGGLGINLVAADTVILM 707
Query: 703 DSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRL 760
D+DWNP DLQA+ R HR+GQ N V IFR + + SIEE ++ + K LE LV+ G+
Sbjct: 708 DNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVLISRSGSKRFLERLVIQMGQF 767
Query: 761 KAQNINQ----VTIFFQTWRLLS-CSVEGILELVFLWTRSWKNDVWVCDAVERARKLTIS 815
K N N+ T + + + S+ ++EL + +S +N D+ E K+ +S
Sbjct: 768 KFSNFNKKLTAATTSNEQGAIKNDWSINDMMELSKIHFKSTQNGQTSQDSAEEDEKILLS 827
Query: 816 KE 817
+
Sbjct: 828 DQ 829
Score = 233 (87.1 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 62/162 (38%), Positives = 94/162 (58%)
Query: 226 ESDISAFQPEIERFIKIQSRSHRSSCNKQ---KSSPQDVTESTKKPKE-FQQYEHS---- 277
ESD QP I++ K + +S ++ KQ ++++STK +E ++ ++S
Sbjct: 107 ESDT---QP-IKKRRKTKPKSKSTANGKQDIVSMLSTNISDSTKSTREAIEKSQNSSKIT 162
Query: 278 ----PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI 333
P+ ++GG L YQ++GL +L + + ILADEMGLGKT+Q I+FL+ L I
Sbjct: 163 NNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIENGI 222
Query: 334 S-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNII 374
+ P LVV P+STL NW E +AP++ V Y+GT Q RN I
Sbjct: 223 NGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDI 264
Score = 210 (79.0 bits), Expect = 2.5e-69, Sum P(3) = 2.5e-69
Identities = 44/89 (49%), Positives = 60/89 (67%)
Query: 408 DVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPL 467
+++LTSYE+ D L I W+ +IVDEGHRLKN L LK+ + +R+LLTGTPL
Sbjct: 274 NIILTSYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPL 333
Query: 468 QNNLDELFMLMHFLDAGKFGSLEEFQEEF 496
QNNL+EL+ L++F+ F LE FQ+ F
Sbjct: 334 QNNLNELWSLLNFILPDIFHDLELFQQWF 362
Score = 147 (56.8 bits), Expect = 9.9e-63, Sum P(3) = 9.9e-63
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 470 NLDELFMLMHFLDAGKFGSLEEFQEEFKDI---N-QEEQISRLHRMLAPHLLRRVKKDVM 525
N DEL L L+ G+ E EE K++ N QE I LH +L P +LRR+K+DV+
Sbjct: 363 NFDELTELAGELE----GTNNEEDEETKNLIKLNIQETLIKNLHTILKPFMLRRLKRDVI 418
Query: 526 KELPPKKELILRVELSSKQKE-YYKAI 551
K LPPKKE +L + ++ QK+ YY A+
Sbjct: 419 KNLPPKKEYLLHIPMTKLQKKIYYDAV 445
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 459 (166.6 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 92/198 (46%), Positives = 138/198 (69%)
Query: 567 ISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFK---QLLESSGKLQLLDKMMVKLKEQ 623
+ L N++M L++ C H Y++E P ++ T FK QL+E+SGK +LD+M+ +LK++
Sbjct: 574 LKLQNILMLLKRCCNHAYLIE--YP-LDPTTGDFKIDEQLVEASGKFLILDRMLPELKKR 630
Query: 624 GHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLS 683
GH+VLI+SQ +LD+L DY + ++Y R+DG + A+R + +F++ + F FLLS
Sbjct: 631 GHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSS-DPEVFLFLLS 689
Query: 684 TRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMM 743
TRAGGLGINL +ADTVII+DSDWNP ADLQA R HR+GQT V++ RLIT +I+E+++
Sbjct: 690 TRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKIL 749
Query: 744 QMTKKKMVLEHLVVGRLK 761
+ K LE +V+ + K
Sbjct: 750 ERASAKRKLEKMVIHKNK 767
Score = 319 (117.4 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 103/358 (28%), Positives = 171/358 (47%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQS--RSHRSSCNKQKSSPQDVTE 263
++E + K K+ +E E ++ + +IE+ S + S ++ S E
Sbjct: 156 KEEIMSKAKKPKMEE---EAQASVKLEAEDIEKLSDTNSDIKGRLSETLRENSKQMLDPE 212
Query: 264 STK--KPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQS 321
T +P QQ P+ +GG + YQ+EG+ +LR W + ILADEMGLGKTIQ
Sbjct: 213 RTVNGQPVPAQQ----PQLFTGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQC 268
Query: 322 IAFLASLFGERI-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR-NIIREYEF 379
IA +A + +++ P LVVAPLSTL NW EF + P+++V++Y G + R +++++
Sbjct: 269 IAHIAMMVEKKVLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQ 328
Query: 380 YFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHR 439
+ +DR +Y +++ + +K + C +V E
Sbjct: 329 H---QGSLRMCPVVVTSFEIAMRDRKFLQRFHWNYLIVD-EGHRIKNLN--CRLVQELKM 382
Query: 440 LKNKDSKLFSSLK-QYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD 498
L + L + Q + L L + D+L + D S E
Sbjct: 383 LPTDNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDISTITS----DAENIV 438
Query: 499 INQEEQ--ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
N+ EQ + LH +L P LLRR+K DV E+PPKKE+++ L++KQ+ +Y AI+ +
Sbjct: 439 ANEREQNILHMLHLILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNK 496
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 568 (205.0 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 907 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 966
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 967 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1026
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1027 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1086
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1087 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1146
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1147 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1181
Score = 305 (112.4 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 804 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 863
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 864 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 923
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 924 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 961
Score = 205 (77.2 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 692 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 751
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 752 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 793
Score = 45 (20.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
+L A + G+LEE +EE + + + ++ + + A + + KK + PP ++L
Sbjct: 1307 WLRAIEDGNLEEMEEEVR-LKKRKRRRNVDKDPAKEDVEKAKK--RRGRPPAEKLSPNPP 1363
Query: 540 LSSKQKEYYKAILTR--NYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTN 597
+KQ AI+ NY+ G Q+S + + + RK Y L D +
Sbjct: 1364 KLTKQMN---AIIDTVINYK---DSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1417
Query: 598 ESFKQ-LLESSGKLQLLDKMMV 618
E + S G L+ D M++
Sbjct: 1418 ERIRNHKYRSLGDLEK-DVMLL 1438
Score = 42 (19.8 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1300 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1327
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 568 (205.0 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 909 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 968
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 969 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1028
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1029 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1088
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1089 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1148
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1149 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1183
Score = 305 (112.4 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 806 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 865
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 866 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 925
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 926 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 963
Score = 205 (77.2 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 694 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 753
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 754 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 795
Score = 45 (20.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
+L A + G+LEE +EE + + + ++ + + A + + KK + PP ++L
Sbjct: 1309 WLRAIEDGNLEEMEEEVR-LKKRKRRRNVDKDPAKEDVEKAKK--RRGRPPAEKLSPNPP 1365
Query: 540 LSSKQKEYYKAILTR--NYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTN 597
+KQ AI+ NY+ G Q+S + + + RK Y L D +
Sbjct: 1366 KLTKQMN---AIIDTVINYK---DSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1419
Query: 598 ESFKQ-LLESSGKLQLLDKMMV 618
E + S G L+ D M++
Sbjct: 1420 ERIRNHKYRSLGDLEK-DVMLL 1440
Score = 42 (19.8 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1302 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1329
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 568 (205.0 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 909 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 968
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 969 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1028
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1029 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1088
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1089 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1148
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1149 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1183
Score = 305 (112.4 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 806 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 865
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 866 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 925
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 926 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 963
Score = 205 (77.2 bits), Expect = 4.0e-69, Sum P(2) = 4.0e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 694 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 753
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 754 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 795
Score = 45 (20.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
+L A + G+LEE +EE + + + ++ + + A + + KK + PP ++L
Sbjct: 1309 WLRAIEDGNLEEMEEEVR-LKKRKRRRNVDKDPAKEDVEKAKK--RRGRPPAEKLSPNPP 1365
Query: 540 LSSKQKEYYKAILTR--NYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTN 597
+KQ AI+ NY+ G Q+S + + + RK Y L D +
Sbjct: 1366 KLTKQMN---AIIDTVINYK---DSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1419
Query: 598 ESFKQ-LLESSGKLQLLDKMMV 618
E + S G L+ D M++
Sbjct: 1420 ERIRNHKYRSLGDLEK-DVMLL 1440
Score = 42 (19.8 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1302 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1329
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 568 (205.0 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 909 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 968
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 969 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1028
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1029 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1088
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1089 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1148
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1149 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1183
Score = 305 (112.4 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 806 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 865
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 866 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 925
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 926 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 963
Score = 205 (77.2 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 694 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 753
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 754 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 795
Score = 42 (19.8 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1302 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1329
Score = 40 (19.1 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
+L A + G+LEE +EE + + + ++ + + A + + KK + PP ++L
Sbjct: 1309 WLRAIEDGNLEEMEEEVR-LKKRKRRRNVDKDPAKEDVEKAKK--RRGRPPAEKL 1360
Score = 39 (18.8 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1405 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1435
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 568 (205.0 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 930 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 989
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 990 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1049
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1050 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1109
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1110 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1169
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1170 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1204
Score = 305 (112.4 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 827 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 886
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 887 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 946
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 947 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 984
Score = 205 (77.2 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 715 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 774
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 775 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 816
Score = 42 (19.8 bits), Expect = 3.7e-38, Sum P(3) = 3.7e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1323 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1350
Score = 40 (19.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 33/142 (23%), Positives = 61/142 (42%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
+L A + G+LEE +EE + + + ++ + + + + KK + PP ++L
Sbjct: 1330 WLRAIEDGNLEEMEEEVR-LKKRKRRRNVDKDPVKEDVEKAKK--RRGRPPAEKLSPNPP 1386
Query: 540 LSSKQKEYYKAILTR--NYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTN 597
+KQ AI+ NY+ G Q+S + + + RK Y L D +
Sbjct: 1387 KLTKQMN---AIIDTVINYK---DSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIK 1440
Query: 598 ESFKQ-LLESSGKLQLLDKMMV 618
E + S G L+ D M++
Sbjct: 1441 ERIRNHKYRSLGDLEK-DVMLL 1461
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 568 (205.0 bits), Expect = 4.3e-69, Sum P(2) = 4.3e-69
Identities = 116/275 (42%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 925 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAK 984
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
IL + ++G G +L+N +M+LRK+C HPYM + +E + +N +
Sbjct: 985 GILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAE 1044
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ HRVL++ Q ++ ++EDY F+ + Y R+DG +
Sbjct: 1045 LYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSED 1104
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + +FN S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1105 RAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1164
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1165 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1199
Score = 305 (112.4 bits), Expect = 3.9e-38, Sum P(3) = 3.9e-38
Identities = 72/158 (45%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 822 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 881
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 882 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 941
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 942 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYR 979
Score = 205 (77.2 bits), Expect = 4.3e-69, Sum P(2) = 4.3e-69
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G+L YQL+GL ++ ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 710 ERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 769
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P+L++ PLSTL NW EF WAP + + Y GT R
Sbjct: 770 KRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMR 811
Score = 42 (19.8 bits), Expect = 3.9e-38, Sum P(3) = 3.9e-38
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 642 DYLTFKKWQYERIDGKVGGAERQIRIDR 669
D LT K+W DG + E ++R+ +
Sbjct: 1318 DALTEKQWLRAIEDGNLEEMEEEVRLKK 1345
Score = 40 (19.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 496 FKD-INQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
+KD N E+ S + + R +V +LP +KEL EL K ++ K
Sbjct: 1397 YKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1451
Score = 40 (19.1 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKEL 534
+L A + G+LEE +EE + + + ++ + + A + + KK + PP ++L
Sbjct: 1325 WLRAIEDGNLEEMEEEVR-LKKRKRRRNVDKDPAKEDVEKAKK--RRGRPPAEKL 1376
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 567 (204.7 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 117/275 (42%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ QK Y K
Sbjct: 927 DLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGK 986
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNE--SFKQ 602
IL + ++G G +L+N +M+L+K+C HPYM + +E + N S
Sbjct: 987 GILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPD 1046
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KLK HRVL++ Q ++ +LEDY ++ + Y R+DG +
Sbjct: 1047 LYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSED 1106
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + +FN + S F FLLSTRAGGLG+NL ADTV+I+DSDWNPH DLQA RAHR+G
Sbjct: 1107 RAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIG 1166
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1167 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1201
Score = 301 (111.0 bits), Expect = 7.9e-38, Sum P(3) = 7.9e-38
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VL+T+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 824 KFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 883
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 884 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 943
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ QK Y+
Sbjct: 944 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYR 981
Score = 199 (75.1 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 42/106 (39%), Positives = 66/106 (62%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + FL G+L YQ++GL ++ ++ + ILADEMGLGKTIQ+I + L
Sbjct: 712 ERVDKQSTFLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEL 771
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGT-SQARNII 374
+R++ P+L++ PLSTL NW E WAP + + Y GT S R+++
Sbjct: 772 KRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSLV 817
Score = 49 (22.3 bits), Expect = 7.9e-38, Sum P(3) = 7.9e-38
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 634 QHMLDL-LEDYLTFKKWQYERIDGKVGGAERQIRIDR 669
+H D+ D LT K+W DG + E +IR+ R
Sbjct: 1311 RHRRDVDYSDALTEKQWLRAIEDGNLEEIEEEIRLKR 1347
Score = 40 (19.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1405 RQLSEVFVQLPSRKELPEYYELIRKPVDFKK 1435
Score = 38 (18.4 bits), Expect = 2.4e-51, Sum P(3) = 2.4e-51
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 275 EHSPEFLSGGSLHPYQL 291
EH P +SGG P Q+
Sbjct: 133 EHVPSPMSGGGPTPPQM 149
Score = 38 (18.4 bits), Expect = 2.4e-51, Sum P(3) = 2.4e-51
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 451 LKQYSTRHRVLLTGT--PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISR 507
+K T +L GT P + L+ + + EE +F++ + EE +SR
Sbjct: 597 VKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSDFEEEDDEEVVSR 655
Score = 38 (18.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 480 FLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVE 539
+L A + G+LEE +EE + + + ++ + + + + KK + PP ++L
Sbjct: 1327 WLRAIEDGNLEEIEEEIR-LKRRKRRRHVDKDVRREDGDKAKK--RRGRPPAEKLSPNPP 1383
Query: 540 LSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRK 578
+KQ + NY+ ++ G Q+S + V + RK
Sbjct: 1384 KLTKQMNAIVDTVI-NYRDIS---GRQLSEVFVQLPSRK 1418
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 556 (200.8 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 207 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 266
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 267 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 326
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 327 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 386
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 387 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 446
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 447 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 481
Score = 300 (110.7 bits), Expect = 2.4e-38, Sum P(2) = 2.4e-38
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 104 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 163
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 164 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 223
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 224 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 261
Score = 197 (74.4 bits), Expect = 2.5e-68, Sum P(2) = 2.5e-68
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG-ERIS-PHLVVAP 341
G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L +RI+ P L++ P
Sbjct: 4 GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP 63
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
LSTL NW EF WAP + V Y G+ AR
Sbjct: 64 LSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 93
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 698 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 728
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 556 (200.8 bits), Expect = 7.8e-68, Sum P(2) = 7.8e-68
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 288 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 347
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 348 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 407
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 408 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 467
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 468 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 527
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 528 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 562
Score = 300 (110.7 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 185 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 244
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 245 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 304
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 305 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 342
Score = 198 (74.8 bits), Expect = 7.8e-68, Sum P(2) = 7.8e-68
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 73 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 132
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 133 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 174
Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 812 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 842
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 556 (200.8 bits), Expect = 3.9e-67, Sum P(2) = 3.9e-67
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 754 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 813
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 814 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 873
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 874 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 933
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 934 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 993
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 994 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1028
Score = 300 (110.7 bits), Expect = 6.6e-38, Sum P(2) = 6.6e-38
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 651 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 710
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 711 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 770
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 771 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 808
Score = 198 (74.8 bits), Expect = 3.9e-67, Sum P(2) = 3.9e-67
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 539 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 598
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 599 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 640
Score = 37 (18.1 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 441 KNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK 497
+ ++ K+F +RHR ++L E L A + G+LEE +EE +
Sbjct: 1159 EEEEEKMFGR----GSRHR---KEVDYSDSLTEKQWLKQLKAAIEEGTLEEIEEEVR 1208
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 691 (248.3 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 152/357 (42%), Positives = 213/357 (59%)
Query: 414 YEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDE 473
Y M D L I W +I+DEGHR+KN KL + LK Y + HR+LLTGTPLQNNL+E
Sbjct: 863 YLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEE 922
Query: 474 LFMLMHFLDAGKFGSLEEFQEEFKD--------------INQEEQ---ISRLHRMLAPHL 516
L+ L++FL F S E+F + F +++EE I+RLH++L P +
Sbjct: 923 LWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFV 982
Query: 517 LRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLI-NVVME 575
LRR+K V ELP K E ++R E S+ Y K ++ R L G A+ + N VME
Sbjct: 983 LRRLKHKVENELPEKIERLIRCEASA----YQKLLMKRVEDNLGSIGNAKSRAVHNSVME 1038
Query: 576 LRKLCCHPYMLEGVEPDIEDT--NESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQF 633
LR +C HPY+ + ++ + ++ GKL++LD+M+ KLK HRVL +S
Sbjct: 1039 LRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTM 1098
Query: 634 QHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINL 693
+LD++EDYLT K ++Y R+DG+ G +R ID FN S F FLLS RAGG+G+NL
Sbjct: 1099 TRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNL 1158
Query: 694 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKM 750
ADTVI++D+DWNP DLQA ARAHR+GQ V++ R T S+EE++ + K+
Sbjct: 1159 QAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKL 1215
Score = 290 (107.1 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 77/196 (39%), Positives = 112/196 (57%)
Query: 406 KFDVLLTSYE-MINL-DSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLT 463
KF+VLLT+YE ++N D L I W +I+DEGHR+KN KL + LK Y + HR+LLT
Sbjct: 853 KFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLT 912
Query: 464 GTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-------DINQEEQI-SRLHRMLAPH 515
GTPLQNNL+EL+ L++FL F S E+F + F + + EE + S +L +
Sbjct: 913 GTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIIN 972
Query: 516 LLRRVKKD-VMKELPPK--KELILRVE--LSSKQKEYYKAILTRNYQILTRRGGAQISLI 570
L +V + V++ L K EL ++E + + Y K ++ R L G A+ +
Sbjct: 973 RLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAV 1032
Query: 571 -NVVMELRKLCCHPYM 585
N VMELR +C HPY+
Sbjct: 1033 HNSVMELRNICNHPYL 1048
Score = 45 (20.9 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 587 EGVEPDIEDTNESFKQLLESSGK-LQLLDKMMVK-LKEQG 624
E EP IE + S QL + + L+D+M ++ KE G
Sbjct: 2800 ESKEPGIESADVSLHQLADIQAEPSNLVDQMDIEESKEPG 2839
Score = 41 (19.5 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 247 HRSSCNKQKSSPQ--DVTESTKKPKEFQQY---EHSPEFLSGGSLHPYQLEGL 294
H S K K + + + +K KE +Q E EF G +H +LE L
Sbjct: 552 HLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKEKLEDL 604
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 556 (200.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 947 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1006
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1007 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1066
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1067 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1126
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1127 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1186
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1187 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1221
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 844 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 903
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 904 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 963
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 964 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1001
Score = 198 (74.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 732 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 791
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 792 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1438 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1468
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 556 (200.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1445 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1475
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 556 (200.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1445 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1475
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 556 (200.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1446 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1476
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 556 (200.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1446 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1476
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 556 (200.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.1e-66, Sum P(2) = 1.1e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1450 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1480
Score = 37 (18.1 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 441 KNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK 497
+ ++ K+F +RHR ++L E L A + G+LEE +EE +
Sbjct: 1327 EEEEEKMFGR----GSRHR---KEVDYSDSLTEKQWLKQLKAAIEEGTLEEIEEEVR 1376
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 404 (147.3 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 117/328 (35%), Positives = 170/328 (51%)
Query: 278 PEFLSGG-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERISP- 335
P+ LS G L YQ+ GLN+L ++ + ILADEMGLGKTIQ IAFLA L +S
Sbjct: 280 PKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQA 339
Query: 336 -HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXX 394
HL+V P STL NWE E + W P++ V Y G+ R +R F
Sbjct: 340 AHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRG-RFAKDGFTGFDVLLTTY 398
Query: 395 XXXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQY 454
++R F V Y +I DE H LKN ++ +++L
Sbjct: 399 HIVGSTPEERKMFRVCKLDY-----------------VIFDEAHMLKNMTTQRYANLITI 441
Query: 455 STRHRVLLTGTPLQNNLDELFMLMHFLDAGKFG-SLEEFQEEF-----KDINQEE----- 503
+ R R+LLTGTPLQNNL EL L+ F+ F S+E+ + F D +Q+E
Sbjct: 442 NARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQ 501
Query: 504 --QISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR 561
QI R R++ P +LRR+KKDV+K LP K L+ +V +SS+QK YY ++ +Y +
Sbjct: 502 ETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELV--DYYSNNK 559
Query: 562 R---GGAQISLINVVMELRKLCCHPYML 586
++ + I ++ME+R++ HP ++
Sbjct: 560 GEVCSSSERAGIAIMMEMRRIANHPLLM 587
Score = 355 (130.0 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 74/161 (45%), Positives = 105/161 (65%)
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L+ SGK LD ++ KLK +GHRVL++SQF MLD++E+YL +K+ + R+DG
Sbjct: 647 LICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNV 706
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
RQ I FN +S F FLLST+AGG+GINL ADT +I+D D+NP+ D QA R HR+G
Sbjct: 707 RQDLITDFNGDDSI-FVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMG 765
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQ 763
Q V I+RLI+ +IEE ++ ++K+ LE + K +
Sbjct: 766 QQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITSNEKGE 806
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 556 (200.8 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1479 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1509
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 556 (200.8 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 113/275 (41%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 955 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1014
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1015 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1074
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1075 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1134
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1135 RGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1194
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1195 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1229
Score = 300 (110.7 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 852 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 911
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1009
Score = 198 (74.8 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 740 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 799
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 800 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 39 (18.8 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1511 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1541
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 410 (149.4 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 103/259 (39%), Positives = 153/259 (59%)
Query: 485 KFGSLEEFQEEFKDINQEE-QISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSK 543
K G ++++ + ++ I RLH++L P +LRR +DV LP K ++LR +S+
Sbjct: 1176 KEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAI 1235
Query: 544 QKEYY---KAILTRNY-----QILTRRGG---AQI--SLINVVMELRKLCCHPYMLEGVE 590
Q Y KA T ++ ++ A+I +L N MELRK C HP +L
Sbjct: 1236 QSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHP-LLN--Y 1292
Query: 591 PDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
P D ++ F L+ S GKL +LD++++KL+ GHRVL++S +LD+LE+YL +++
Sbjct: 1293 PYFNDFSKDF--LVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLV 1350
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
Y RIDG +R+ I FN ++ F FLLS RA G G+NL TADTV+IYD D NP
Sbjct: 1351 YRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKN 1410
Query: 711 DLQAMARAHRLGQTNKVMI 729
+ QA+ARAHR+GQT +V +
Sbjct: 1411 EEQAVARAHRIGQTREVKV 1429
Score = 213 (80.0 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 49/137 (35%), Positives = 72/137 (52%)
Query: 238 RFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFL 297
RF ++ + SS NK + V E + P L G+L YQL GL ++
Sbjct: 942 RFTEMNAPKENSSVNKYYTLAHAVNEVVVR---------QPSMLQAGTLRDYQLVGLQWM 992
Query: 298 RFSWSKQTHVILADEMGLGKTIQSIAFLASL--FGERISPHLVVAPLSTLRNWEREFATW 355
++ + + ILADEMGLGKT+Q +A +A L F PHL++ P + L NW+ E TW
Sbjct: 993 LSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTW 1052
Query: 356 APQMNVVMYVGTSQARN 372
P ++ + YVGT R+
Sbjct: 1053 LPSVSCIYYVGTKDQRS 1069
Score = 198 (74.8 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 40/99 (40%), Positives = 64/99 (64%)
Query: 405 IKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTG 464
+KF+VL+T+YE I D + L + W+ +I+DE R+K+++S L L +Y + R+LLTG
Sbjct: 1079 MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTG 1138
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEE 503
TPLQN+L EL+ L++ L F + + F + F Q+E
Sbjct: 1139 TPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKE 1177
Score = 41 (19.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 451 LKQYSTRHRVLL--TGTPLQNNLDELFMLMHFLDAGKFG--SLEEFQEEFKDINQEE 503
+K T HRVLL T T L + L+E + G SLE+ + D N +
Sbjct: 1318 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPD 1374
Score = 38 (18.4 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 652 ERIDGKVGGAERQIRIDR 669
ER+DG A + +++DR
Sbjct: 1796 ERVDGSEMPAAQPLQVDR 1813
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 553 (199.7 bits), Expect = 2.6e-66, Sum P(3) = 2.6e-66
Identities = 112/275 (40%), Positives = 175/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 967 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1026
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1027 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGSD 1086
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1087 LYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAED 1146
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN + F FLLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1147 RGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1206
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1207 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1241
Score = 299 (110.3 bits), Expect = 1.0e-36, Sum P(3) = 1.0e-36
Identities = 70/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VL+T+YE I D L ++W+ MIVDEGHR+KN KL L Y RVLLTG
Sbjct: 864 KFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTG 923
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 924 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 983
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 984 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1021
Score = 203 (76.5 bits), Expect = 2.6e-66, Sum P(3) = 2.6e-66
Identities = 45/102 (44%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ E L G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 752 EKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEF 811
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+R++ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 812 KRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR 853
Score = 39 (18.8 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1460 RQLSEVFIQLPSRKELPEYYELIRKPVDFRK 1490
Score = 37 (18.1 bits), Expect = 2.6e-66, Sum P(3) = 2.6e-66
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 21 DESDDDADFEQGKPGTTVEKFERIVRIDAKDDS 53
DE +DD + Q T EK + I D++D S
Sbjct: 681 DEEEDDEEEPQPSQAPTEEK-KVIPDPDSEDVS 712
>DICTYBASE|DDB_G0281441 [details] [associations]
symbol:ercc6 "DNA excision repair protein 6"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006289 "nucleotide-excision repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
Uniprot:Q54TY2
Length = 1655
Score = 663 (238.4 bits), Expect = 4.3e-66, Sum P(2) = 4.3e-66
Identities = 166/493 (33%), Positives = 274/493 (55%)
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERIS-PHLVVAPL 342
+L YQ+ + +L ++T I+ DEMGLGKT+Q ++FLASL + R+ P L+VAP
Sbjct: 794 NLFEYQVTCVRWLYELHCQETGGIVGDEMGLGKTVQIVSFLASLHYSRRLGGPALIVAPA 853
Query: 343 STLRNWEREFATWAPQMNVVMY--VGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXX 400
+ L NW +EF W P V ++ G+ N + E
Sbjct: 854 TLLSNWIKEFHKWWPPFRVGLFHSSGSGGGGNDGSDKEDIVKKIAE-------------- 899
Query: 401 XQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRV 460
K +LLT+++ I ++ L W+ +I+DEGH+++N D+++ S KQ T HRV
Sbjct: 900 -----KGHILLTTFDSIRINQEILLKYHWEYVILDEGHKIRNPDAEITLSCKQLQTPHRV 954
Query: 461 LLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-DIN-------QEEQISRLHR-- 510
+L+G+P+QN L EL+ L F+ G+ G+L F+ +F I+ Q+ ++
Sbjct: 955 ILSGSPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAAYKCA 1014
Query: 511 -----MLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA 565
+++P++LRRVK DV+K LP K E +L L+ Q++ Y L N I + G
Sbjct: 1015 VALRDLISPYMLRRVKSDVLKSLPSKNEQVLMCPLTPFQEKLYLEFLDSN-DIKSVLDGR 1073
Query: 566 QISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGH 625
+ +L + + L+K+C HP +L ++ ED + + E S KL++++ ++ +QG
Sbjct: 1074 RNALYGIDI-LKKICNHPDILH-MDASDEDRPHDYGNI-ERSAKLKVVETILPLWFKQGD 1130
Query: 626 RVLIYSQFQHMLDLLEDYLTFK-KWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLST 684
+VL++ Q + MLD++E Y+ ++ Y R+DG +RQ +++FN + S F FLL+T
Sbjct: 1131 KVLLFCQTRQMLDIVEQYIRDSTQFNYLRMDGTTSIRQRQCLVEQFNI-DPSLFIFLLTT 1189
Query: 685 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQ 744
+ GGLG+NL A+ VI++D DWNP D+QA R +R+GQ V I+RLIT G+IEE++
Sbjct: 1190 KVGGLGLNLTGANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYH 1249
Query: 745 MTKKKMVLEHLVV 757
K L + ++
Sbjct: 1250 RQIYKQFLTNKIL 1262
Score = 53 (23.7 bits), Expect = 4.3e-66, Sum P(2) = 4.3e-66
Identities = 26/115 (22%), Positives = 47/115 (40%)
Query: 162 RLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDEC 221
R+RT N + +N ++D + + EDD+ + YKE+ ++
Sbjct: 533 RIRTPTNRLNLTTDTNKEKDDDNEKEENDENENEENDDDDDEDDDDDQ-EDYKEIEIEDN 591
Query: 222 YWEYESDISAFQPEIERFIKIQSRSHRSSC-NKQKSSPQDVTESTKKPKEFQQYE 275
E E +I E E +K +S +S+ N ++ QDV + E + E
Sbjct: 592 EDEDEDEI-----EEEFTLKKNKKSIKSTISNNKRKRKQDVDDDDDNDDEDEDDE 641
Score = 45 (20.9 bits), Expect = 3.0e-65, Sum P(2) = 3.0e-65
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQD 260
EDD +Y E +E + E + + P + K S+ + S K KS P++
Sbjct: 460 EDDNDDYNNNNNEEENEEDEIDIEKEENDESPPPKSSKKSNSKLKKISTPKSKSKPKN 517
Score = 40 (19.1 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 244 SRSHRSSCNKQKSSPQDVTESTK---KPKEFQQYEHSPEFLSGGS 285
S H S NK+ DV + TK + KE +Q E + GGS
Sbjct: 351 SEMH-SKTNKKTIVLDDVVDITKTLDQEKETEQNEKNQGGGGGGS 394
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 417 (151.9 bits), Expect = 1.2e-65, Sum P(4) = 1.2e-65
Identities = 83/165 (50%), Positives = 114/165 (69%)
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L+ +GKL +LD ++ +LK GHRVLIYSQ M+DLLE+Y+ +K +Y R+DG +
Sbjct: 1151 LITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISA 1210
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R+ + F + + F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHRLG
Sbjct: 1211 RRDMVADFQTR-ADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLG 1269
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
QT +V ++RLI +G+IEER++Q ++K ++ +V+ G K +
Sbjct: 1270 QTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTL 1314
Score = 359 (131.4 bits), Expect = 1.2e-65, Sum P(4) = 1.2e-65
Identities = 103/314 (32%), Positives = 163/314 (51%)
Query: 253 KQKSSPQDVTESTK--KPKEFQQYEHSPE-FLSGGSLHPYQLEGLNFLRFSWSKQTHVIL 309
K+K + ES + KP+ + + P+ + G+L YQ++G+ +L + + IL
Sbjct: 499 KEKEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGIL 558
Query: 310 ADEMGLGKTIQSIAFLASLFGERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQ 369
ADEMGLGKT+QSIAFL I+ H V W F +P ++ +
Sbjct: 559 ADEMGLGKTVQSIAFLC-----HIAEHYGV--------WG-PFLVISPAST--LHNWQQE 602
Query: 370 ARNIIREYEF--YFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSASLKPI 427
+ +++ Y+ +D F V++TSY+++ D I
Sbjct: 603 MSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDA-SFHVVITSYQLVVSDYKYFNRI 661
Query: 428 KWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFG 487
KWQ M++DE +K+ S+ + L +S R+R+LL+GTP+QN++ EL+ L+HF+ F
Sbjct: 662 KWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFD 721
Query: 488 SLEEFQEEF-KDINQ---------EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILR 537
S +EF E F KDI E+QISRLH +L P +LRR+KKDV EL K E+++
Sbjct: 722 SHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVY 781
Query: 538 VELSSKQKEYYKAI 551
L+ +QK Y+A+
Sbjct: 782 CPLTIRQKLLYRAL 795
Score = 41 (19.5 bits), Expect = 5.1e-33, Sum P(4) = 5.1e-33
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 118 SDVSKLGSKQIFVKQYLVKWKGLSYLHCTW-VP-EKEFLKAFKSNPRLRTKVNNFHRQMS 175
S S L + Q + +++ +K + Y W P E++ L+ F L T+ +FH ++
Sbjct: 591 SPASTLHNWQQEMSRFVPDFKVVPY----WGSPAERKILRQFWDQKHLHTRDASFHVVIT 646
Query: 176 SNNNAEEDFVAI-RPEW 191
S D+ R +W
Sbjct: 647 SYQLVVSDYKYFNRIKW 663
Score = 40 (19.1 bits), Expect = 1.2e-65, Sum P(4) = 1.2e-65
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 11 RSDRKPIYQLDESDDD 26
RS RKP+ +E+DD+
Sbjct: 40 RSLRKPLSSDEETDDE 55
Score = 40 (19.1 bits), Expect = 5.1e-33, Sum P(4) = 5.1e-33
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 207 KEYLVKYKELSYDECYWEYESDISAFQ 233
+ L KY L+Y +W+ + D S +Q
Sbjct: 934 RRVLEKYPLLAYRRFWWKKQPD-SRYQ 959
Score = 37 (18.1 bits), Expect = 1.2e-65, Sum P(4) = 1.2e-65
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 158 KSNPRL-RTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKEL 216
K + RL R K NN H++M +N A V R A + KE + + K L
Sbjct: 320 KESGRLQRIKSNN-HKEMLANCKRVAGMCA------KVVRQRAINSQRIMKETVWRAKRL 372
Query: 217 SYDE-CYWE-YE 226
+ + YW+ YE
Sbjct: 373 TREMLAYWKRYE 384
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 444 (161.4 bits), Expect = 1.4e-65, Sum P(3) = 1.4e-65
Identities = 88/167 (52%), Positives = 116/167 (69%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+ L+ SGKL LD ++ +LK QGHRVLIYSQ M+DLLE+Y+ ++K Y R+DG
Sbjct: 1091 ESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKI 1150
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER+ + F +N F FLLSTRAGGLGINL ADTVI YDSDWNP D QAM RAHR
Sbjct: 1151 SERRDMVADFQTRNDI-FVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR 1209
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNI 765
LGQT +V ++RLI +G+IEER++Q K+K ++ +V+ G K +
Sbjct: 1210 LGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTL 1256
Score = 322 (118.4 bits), Expect = 1.4e-65, Sum P(3) = 1.4e-65
Identities = 101/321 (31%), Positives = 162/321 (50%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG-ERI-SPHLVVAP 341
G L YQL+G+N+L + + + ILADEMGLGKT+QSIA LA L E I P L+++P
Sbjct: 518 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 577
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXX 401
STL NW +EF + P+ V+ Y G R ++ Y
Sbjct: 578 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRK--KKKTLYTQDAPFHVVITSYQLVVQDVK 635
Query: 402 Q-DRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDE-GHRLKNKDSKLFSSLKQ-YSTRH 458
R+K+ ++ E L S+S ++W+ ++ + +RL + + +++ + ++ H
Sbjct: 636 YFQRVKWQYMVLD-EAQALKSSS--SVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLH 692
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLR 518
++ T +E F K +E E K E Q+SRLH +L P +LR
Sbjct: 693 FIMPTLFDSHEEFNEWF--------SK--DIESHAEN-KSAIDENQLSRLHMILKPFMLR 741
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR-NYQILTRR--GGAQ------ISL 569
R+KKDV EL K E+++ +L+S+QK Y+A+ + + + L + G Q SL
Sbjct: 742 RIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSL 801
Query: 570 INVVMELRKLCCHPYMLEGVE 590
+N+VM+ RK+C HP + E E
Sbjct: 802 MNLVMQFRKVCNHPELFERQE 822
Score = 38 (18.4 bits), Expect = 1.4e-65, Sum P(3) = 1.4e-65
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 282 SGGSLHPYQLEGL 294
S G L+PY L G+
Sbjct: 89 SSGLLNPYSLNGV 101
>ASPGD|ASPL0000068126 [details] [associations]
symbol:cshA species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001304
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000119 HOGENOM:HOG000170952 KO:K10841
OrthoDB:EOG44TSGZ RefSeq:XP_664707.1 ProteinModelPortal:Q5AX77
STRING:Q5AX77 EnsemblFungi:CADANIAT00000362 GeneID:2869817
KEGG:ani:AN7103.2 OMA:HSALEHD Uniprot:Q5AX77
Length = 1193
Score = 667 (239.9 bits), Expect = 1.3e-64, P = 1.3e-64
Identities = 174/519 (33%), Positives = 274/519 (52%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERIS-PHLVVAPLS 343
L YQ G+ ++ +Q I+ DEMGLGKTIQ+IAFLA L + +R++ P +VV P +
Sbjct: 398 LFDYQKTGVQWMWELHQQQVGGIIGDEMGLGKTIQAIAFLAGLHYSKRLTKPIIVVCPAT 457
Query: 344 TLRNWEREFATWAPQMNV-VMYVGTSQARNI----IREYEFYFPXXXXXXXXXXXXXXXX 398
++ W EF W P V +++ S NI RE +
Sbjct: 458 VMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESSREDALMYGTYWSGGSSSGLKAARK 517
Query: 399 XXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRH 458
+ + VL+T+Y + ++ L P++W I+DEGH+++N ++ + K+ T H
Sbjct: 518 VVKRVVEEGHVLVTTYSGLQSYASLLIPVEWGGTILDEGHKIRNPNTSITMHAKELRTPH 577
Query: 459 RVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-DINQ-------EEQISR--- 507
R++L+GTP+QNNL EL+ L F+ + G+L F+ +F+ I Q Q+
Sbjct: 578 RIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAK 637
Query: 508 ----LHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRG 563
L ++P+LL+R K DV +LP K E +L L+ Q++ Y+A L RG
Sbjct: 638 CAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCRLTKPQRQAYEAFLGSEEMQSILRG 697
Query: 564 GAQISLINVVMELRKLCCHP----YMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVK 619
Q+ L V + LRK+C HP + L +P+ + +S GK+Q++ ++
Sbjct: 698 RRQV-LYGVDI-LRKICNHPDLQNHKLLYAKPNYGNPTKS--------GKMQVVRSLLEL 747
Query: 620 LKEQGHRVLIYSQFQHMLDLLEDYL-TFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRF 678
KE GH+ L+++Q + MLD+LE ++ + + Y R+DG RQ +D FN K+
Sbjct: 748 WKETGHKTLLFAQHRIMLDILEKFVKSLSGFNYRRMDGTTPIQHRQTMVDEFN-KDPDLH 806
Query: 679 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSI 738
FLL+T+ GGLG+NL AD VIIYD DWNP D+QA RA RLGQ V I+RL+T G+I
Sbjct: 807 VFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTIYRLMTAGTI 866
Query: 739 EERMMQMTKKKMVLEHLVVGRLKAQNINQVTIFFQTWRL 777
EE++ K L + ++ K + Q++ + + L
Sbjct: 867 EEKIYHRQIFKQFLTNKILKDPKQRQTFQLSDLYDLFAL 905
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 534 (193.0 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 112/275 (40%), Positives = 174/275 (63%)
Query: 498 DINQEEQI---SRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-----K 549
D+N+EE I RLH++L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y K
Sbjct: 947 DLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAK 1006
Query: 550 AILTRNYQILTRRG-GAQISLINVVMELRKLCCHPYMLEGVEPDIED----TNESFK--Q 602
+L + ++G G +L+N +M+LRK+C HPYM + +E + T +
Sbjct: 1007 GVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLD 1066
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L +SGK +LLD+++ KL+ H+VL++ Q ++ ++EDY ++ ++Y R+DG +
Sbjct: 1067 LYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAED 1126
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R + + FN S F LLSTRAGGLG+NL +ADTVII+DSDWNPH DLQA RAHR+G
Sbjct: 1127 RGMLLT-FNEPGSEYF-ILLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIG 1184
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
Q N+V + RL T S+EE+++ K K+ ++ V+
Sbjct: 1185 QQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI 1219
Score = 300 (110.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 71/158 (44%), Positives = 97/158 (61%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLK-QYSTRHRVLLTG 464
KF+VLLT+YE I D L I+W+ MIVDEGHR+KN KL L Y R+LLTG
Sbjct: 844 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTG 903
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHRM 511
TPLQN L EL+ L++FL F S F++ F D+N+EE I RLH++
Sbjct: 904 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 963
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYK 549
L P LLRR+KK+V +LP K E +++ ++S+ Q+ Y+
Sbjct: 964 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYR 1001
Score = 198 (74.8 bits), Expect = 6.6e-64, Sum P(2) = 6.6e-64
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 272 QQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFG- 330
++ + + G L YQ++GL +L ++ + ILADEMGLGKTIQ+IA + L
Sbjct: 732 ERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEH 791
Query: 331 ERIS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQAR 371
+RI+ P L++ PLSTL NW EF WAP + V Y G+ AR
Sbjct: 792 KRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
Score = 39 (18.8 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 519 RVKKDVMKELPPKKELILRVELSSKQKEYYK 549
R +V +LP +KEL EL K ++ K
Sbjct: 1436 RQLSEVFIQLPSRKELPEYYELIRKPVDFKK 1466
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 378 (138.1 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 85/202 (42%), Positives = 126/202 (62%)
Query: 601 KQLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVG 659
K+L++ GKLQ L ++ +LK+QGHR LI++Q MLD+ E +L + Y R+DG
Sbjct: 1371 KRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTK 1430
Query: 660 GAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 719
+RQ+ +RFN + F F+LSTR+GGLG+NL ADTVI YD+DWNP D QA R H
Sbjct: 1431 IDKRQVLTERFNT-DPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCH 1489
Query: 720 RLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQVTIFFQTWRLLS 779
R+GQT +V I+R IT+ +IEE +++ + +K L+ +V+ KA T FF+ L +
Sbjct: 1490 RIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMVI---KAGEFT--TDFFKNLNLST 1544
Query: 780 -CSVEGILELVFLWTRSWKNDV 800
S++ I + V + W+N V
Sbjct: 1545 KSSIDTIKDNVT--QQEWENAV 1564
Score = 367 (134.2 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 87/224 (38%), Positives = 128/224 (57%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F V +TSY M+ D + KW MI+DE H +KN ++ + ++ ++T R+LLTGTP
Sbjct: 881 FHVCITSYSMVMSDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTGTP 940
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-----------DINQEEQISRLHRMLAPH 515
LQNNL EL+ LMHFL F S EFQ+ F D+N E+ I+RLH +L P
Sbjct: 941 LQNNLMELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGGDDVN-EDIINRLHAVLRPF 999
Query: 516 LLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVME 575
LLRR+KKDV K++PPK I+ +S +QK Y+ + + T G+ S+IN++M+
Sbjct: 1000 LLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFINSSSTQSTLSSGSFFSIINILMQ 1059
Query: 576 LRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVK 619
LRK+C HP + E + P + SS + +LD + +K
Sbjct: 1060 LRKVCNHPDLFE-IRPIVSPLELYPIHFKTSSIVIDILDDIPIK 1102
Score = 42 (19.8 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 705 DWNPHADLQAMARAHRLGQTNKVMI 729
D N D + R R+G+ KVMI
Sbjct: 1965 DENEGNDFEGGGRGGRVGEGKKVMI 1989
Score = 37 (18.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 488 SLEEFQEEFKDINQEEQI 505
+L++ ++EF DIN + I
Sbjct: 141 NLQKNKDEFIDINNKRNI 158
>UNIPROTKB|Q8EGF3 [details] [associations]
symbol:SO_1651 "Helicase/SNF2 family domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR007527 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 544 (196.6 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 123/365 (33%), Positives = 217/365 (59%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+FDV++T+Y ++ D+ + ++ +++DE ++KN +K+ +K + ++ LTGT
Sbjct: 729 EFDVVVTTYPLMVRDNDYYQAQAFEHIVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGT 788
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD----INQEEQISRLHRMLAPHLLRRVK 521
PL+N+L EL LM F G G+ F +EF++ EQ+ L + +AP +LRR K
Sbjct: 789 PLENHLGELKSLMDFCLPGLLGTTAYFNKEFRNRIERYGDSEQVKVLSQRIAPFVLRRTK 848
Query: 522 KDVMKELPPKKELILRVELSSKQKEYYKAI-LTRNYQI---LTRRG--GAQISLINVVME 575
+V+ ELPPK E+ +EL Q+ Y++I L+ +I +G G+ I ++ +++
Sbjct: 849 AEVVTELPPKTEIYQSLELEKDQRNLYESIRLSMEKKIRELFATQGVAGSHIEFLDALLK 908
Query: 576 LRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQH 635
LR+ CC P +++ +E Q ++++ KL L + + ++ ++G ++LI+SQF
Sbjct: 909 LRQACCDPRLVK-----LEQA-----QKVKNNAKLNWLSQNLPEMVQEGRKILIFSQFTS 958
Query: 636 MLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLAT 695
ML L+E+ L + Y ++ G+ RQ++ID+F ++ FL+S +AGG G+NL
Sbjct: 959 MLILIEELLQSLEIDYSKLTGQT--RLRQVQIDKFQEGDTP--VFLISLKAGGTGLNLTA 1014
Query: 696 ADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVL-EH 754
ADTVI YD WNP A+ QA RAHR+GQ N V +++LI G++EE++ +M + K L +
Sbjct: 1015 ADTVIHYDPWWNPAAERQATDRAHRIGQENPVFVYKLIAEGTVEEKIQEMQQHKQGLADS 1074
Query: 755 LVVGR 759
++ G+
Sbjct: 1075 ILEGK 1079
Score = 169 (64.5 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLA------SLFGERISPHLVV 339
L PYQ +GLN+L F Q ILAD+MGLGKTIQ++AFL S G + P L++
Sbjct: 632 LRPYQQQGLNWLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQKQLKSAAGPHL-PSLII 690
Query: 340 APLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEF 379
P S + NW +E A +AP + + + G + + R EF
Sbjct: 691 CPTSLVGNWAKEAAKFAPSLTLAVIHGAQRGPLLARLSEF 730
Score = 37 (18.1 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 214 KELSYDECYWEYESDIS 230
K L+ + C+WE ES ++
Sbjct: 216 KMLATERCFWE-ESRLA 231
>TIGR_CMR|SO_1651 [details] [associations]
symbol:SO_1651 "Snf2 family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR007527
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50966 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0008270
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000294304 RefSeq:NP_717262.2 ProteinModelPortal:Q8EGF3
GeneID:1169445 KEGG:son:SO_1651 PATRIC:23522939 OMA:SSSHIEF
ProtClustDB:CLSK906361 Uniprot:Q8EGF3
Length = 1096
Score = 544 (196.6 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 123/365 (33%), Positives = 217/365 (59%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
+FDV++T+Y ++ D+ + ++ +++DE ++KN +K+ +K + ++ LTGT
Sbjct: 729 EFDVVVTTYPLMVRDNDYYQAQAFEHIVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGT 788
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD----INQEEQISRLHRMLAPHLLRRVK 521
PL+N+L EL LM F G G+ F +EF++ EQ+ L + +AP +LRR K
Sbjct: 789 PLENHLGELKSLMDFCLPGLLGTTAYFNKEFRNRIERYGDSEQVKVLSQRIAPFVLRRTK 848
Query: 522 KDVMKELPPKKELILRVELSSKQKEYYKAI-LTRNYQI---LTRRG--GAQISLINVVME 575
+V+ ELPPK E+ +EL Q+ Y++I L+ +I +G G+ I ++ +++
Sbjct: 849 AEVVTELPPKTEIYQSLELEKDQRNLYESIRLSMEKKIRELFATQGVAGSHIEFLDALLK 908
Query: 576 LRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQH 635
LR+ CC P +++ +E Q ++++ KL L + + ++ ++G ++LI+SQF
Sbjct: 909 LRQACCDPRLVK-----LEQA-----QKVKNNAKLNWLSQNLPEMVQEGRKILIFSQFTS 958
Query: 636 MLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLAT 695
ML L+E+ L + Y ++ G+ RQ++ID+F ++ FL+S +AGG G+NL
Sbjct: 959 MLILIEELLQSLEIDYSKLTGQT--RLRQVQIDKFQEGDTP--VFLISLKAGGTGLNLTA 1014
Query: 696 ADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVL-EH 754
ADTVI YD WNP A+ QA RAHR+GQ N V +++LI G++EE++ +M + K L +
Sbjct: 1015 ADTVIHYDPWWNPAAERQATDRAHRIGQENPVFVYKLIAEGTVEEKIQEMQQHKQGLADS 1074
Query: 755 LVVGR 759
++ G+
Sbjct: 1075 ILEGK 1079
Score = 169 (64.5 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 41/100 (41%), Positives = 57/100 (57%)
Query: 286 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLA------SLFGERISPHLVV 339
L PYQ +GLN+L F Q ILAD+MGLGKTIQ++AFL S G + P L++
Sbjct: 632 LRPYQQQGLNWLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQKQLKSAAGPHL-PSLII 690
Query: 340 APLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEF 379
P S + NW +E A +AP + + + G + + R EF
Sbjct: 691 CPTSLVGNWAKEAAKFAPSLTLAVIHGAQRGPLLARLSEF 730
Score = 37 (18.1 bits), Expect = 1.1e-62, Sum P(3) = 1.1e-62
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 214 KELSYDECYWEYESDIS 230
K L+ + C+WE ES ++
Sbjct: 216 KMLATERCFWE-ESRLA 231
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 373 (136.4 bits), Expect = 4.4e-62, Sum P(3) = 4.4e-62
Identities = 76/159 (47%), Positives = 107/159 (67%)
Query: 601 KQLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVG 659
K+LL+ GKLQ+LD+++ L GHRVLI++Q +LD+LE +L +Y R+DG
Sbjct: 983 KRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATK 1042
Query: 660 GAERQIRIDRFNAKNSSRF-CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARA 718
+RQI +RFN N + F+LSTR+GGLGINL ADTVI YDSDWNP D QA R+
Sbjct: 1043 IEQRQILTERFN--NDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRS 1100
Query: 719 HRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
HR+GQT V I+RLI+ ++E M++ +K +L+ +V+
Sbjct: 1101 HRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVI 1139
Score = 359 (131.4 bits), Expect = 4.4e-62, Sum P(3) = 4.4e-62
Identities = 105/316 (33%), Positives = 160/316 (50%)
Query: 280 FLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHL 337
FL G+L YQ GL +L T+ ILADEMGLGKTIQ+IA LA L E+ + PHL
Sbjct: 441 FLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGPHL 500
Query: 338 VVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXX 397
++ P S + NWE EF + P ++ Y G Q R R +Y P
Sbjct: 501 IIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRS-GWYKPDTWHVCITSYQLVLQ 559
Query: 398 XXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMI-VDEGHRLKNKDSKLFSSLKQYST 456
R K+ ++ E N+ + + +WQ ++ + HRL + L ++L + +
Sbjct: 560 DHQPFRRKKWQYMILD-EAHNIKN--FRSQRWQSLLNFNAEHRLLLTGTPLQNNLVELWS 616
Query: 457 RHRVLLTGTPLQNNLDELFMLMHFLDAGKFGS-LEEFQEEFKDINQEEQ--ISRLHRMLA 513
L+ QNN L F D F ++ EE +D+N E +++LHR+L
Sbjct: 617 LLYFLMPAGVTQNN-SAFANLKDFQDW--FSKPMDRLIEEGQDMNPEAMNTVAKLHRVLR 673
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR--NYQILTRRGGAQISLIN 571
P+LLRR+K +V K++P K E ++ +LS +Q+ Y + R +IL G +S+IN
Sbjct: 674 PYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRARTREILA--SGNFMSIIN 731
Query: 572 VVMELRKLCCHPYMLE 587
+M+LRK+C HP + E
Sbjct: 732 CLMQLRKVCNHPNLHE 747
Score = 41 (19.5 bits), Expect = 4.4e-62, Sum P(3) = 4.4e-62
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 209 YLVKYKE--LSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTK 266
YL+K + LS DE +Y + E E + S S +++ +D+TE +
Sbjct: 249 YLLKTSDDLLSVDELKLKYSNPDLIKNIEREEEAEETSDDEPLSSEDEENEDEDITEESN 308
Query: 267 KPK 269
K
Sbjct: 309 LRK 311
Score = 40 (19.1 bits), Expect = 5.6e-62, Sum P(3) = 5.6e-62
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 6 ERLRVRSDRKPIYQLDESDDDADFEQ 31
E SD +P+ DE ++D D +
Sbjct: 280 EEAEETSDDEPLSSEDEENEDEDITE 305
>GENEDB_PFALCIPARUM|PFF1185w [details] [associations]
symbol:PFF1185w "iswi protein homologue"
species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 352 (129.0 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 72/167 (43%), Positives = 110/167 (65%)
Query: 592 DIEDTNESFKQLLESSGKLQLLDKMMVKLKE-QGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
D++ + K ++ ++ D+ KL E + H+VLI++QFQ +LD LE+Y ++ W+
Sbjct: 1060 DLKLQTDEKKVVINIKNEMNDNDENGEKLGEAKMHKVLIFTQFQLVLDELEEYCKYRCWK 1119
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
Y R+DG R++ I FN +S F +L+STRAGGLGINL A+ VI+YD DWNP
Sbjct: 1120 YMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTAANHVIMYDEDWNPFI 1179
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DLQA+ RAHR+GQ +V +++L+T ++EERM ++K+ L+ LVV
Sbjct: 1180 DLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLVV 1226
Score = 197 (74.4 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 54/165 (32%), Positives = 83/165 (50%)
Query: 214 KELSYDECYWEYESDISAFQPEIERFIK-IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQ 272
K YD + + D+ E FI ++ +H+++C +S V S P +
Sbjct: 271 KSNKYDNDKYNSKKDVDMDSKEFNEFISSLEDEAHQNACKFIES----VFLSVYYPNG-R 325
Query: 273 QYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER 332
+ E P + L P+Q +G+ +L S+ ILADEMGLGKTIQ++ FL+ L +
Sbjct: 326 KIERRP-LVDNVQLKPHQEDGVEWLLKSFLTGG-AILADEMGLGKTIQTLCFLSYLKCNK 383
Query: 333 IS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
I PHL+V PLST+ NW RE + P + + G+ R +E
Sbjct: 384 IDGPHLIVVPLSTVGNWLREIHRFTPHLTCIKICGSKNERTHAKE 428
Score = 181 (68.8 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 37/100 (37%), Positives = 63/100 (63%)
Query: 407 FDVLLTSYEMI-NLDSASLKPI-KWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTG 464
+D+ +T+YE + N + ++ I KWQC+++DE HR+KN+ + S+ + R+LLTG
Sbjct: 437 YDLYVTTYETVKNEEEFFVETIPKWQCIVLDEAHRIKNQSGAIRHSMDRVVGNMRLLLTG 496
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ 504
TPLQNN ELF L++F+ F + E ++ F + +Q +
Sbjct: 497 TPLQNNSAELFTLINFMFPDIFKNSEIIEQAFMNASQNNK 536
Score = 105 (42.0 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 40/117 (34%), Positives = 52/117 (44%)
Query: 47 IDAKDDSCQACGE-SENL--MSCDTCTYAYHAKCLVPPLKAPP-SGSWRCPECVSPLNDI 102
I +D C+ C E S NL + CD C +YH CL L A P S W CP C P D
Sbjct: 65 IPENEDRCKICREKSANLILLLCDGCPNSYHVSCL--GLAAEPESEKWYCPIC-KP--DD 119
Query: 103 DKILDCE-MRPTVAGDS-DVSKLGSKQIFVKQYLVKWKGLSY----LHCTWVPEKEF 153
K LD MR D+ + + S +V Q K G + H T +P+ +F
Sbjct: 120 HKNLDVRRMRKGFVLDNMNGEHVNSSTCYVCQRPGKLLGCDFCPNSFHPTCLPDLDF 176
Score = 96 (38.9 bits), Expect = 5.0e-61, Sum P(4) = 5.0e-61
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 53 SCQACGESENLMSCDTCTYAYHAKCLVPPLKAPP-SGSWRCPECVSPLNDIDKILDC-EM 110
+C C L+ CD C ++H CL P L S W CP C N+ D +L+
Sbjct: 146 TCYVCQRPGKLLGCDFCPNSFHPTCL-PDLDFDNISDQWECPCCK---NE-DPLLNQGHK 200
Query: 111 RPTVAGDSDVSKLGSKQI-FVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRL-----R 164
R T ++ K +++ F + ++K++ +L + ++ L+ F NPR+ +
Sbjct: 201 RWTKNEIQEIMKKRQRELGFWRSKIIKYRN-RFL----LAHRKDLQPFV-NPRVFSNLTK 254
Query: 165 TKVNN-FHRQMSSNNNAEEDF 184
T N+ FH + SSNN +
Sbjct: 255 TFKNDYFHTKGSSNNKKSNKY 275
Score = 73 (30.8 bits), Expect = 5.8e-32, Sum P(5) = 5.8e-32
Identities = 34/158 (21%), Positives = 70/158 (44%)
Query: 495 EFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
+ K +EE + + +L +LRR+K+ + LP K + + L + +YK +L
Sbjct: 586 DLKSAIKEEDLKSIRCLLDKIMLRRLKEQAIT-LPKKIFHDVWLPLGTLSAHWYKRLL-- 642
Query: 555 NYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLD 614
+ + + + L+ +V+++R +C HP + +E F++ ES + +
Sbjct: 643 DIRSMVEEKVSVKKLLGLVIKMRIICGHPKGIVSRPSQMEKLFAFFEE--ESEDIKEQVK 700
Query: 615 KMMVKLKE-QGHRVLIYSQFQHMLDLLEDYLTFKKWQY 651
+KLK G + S +D L L ++ +Y
Sbjct: 701 NDALKLKNISGEEHIESSSKLIFIDKLLCQLHYENCKY 738
Score = 50 (22.7 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 150 EKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEED 183
E+ F+ A ++N NN + + NNN ++D
Sbjct: 525 EQAFMNASQNNKNKSNNNNNNNNKDEKNNNNDDD 558
Score = 48 (22.0 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 577 RKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVL----IYSQ 632
RK C + E + + ++ E K+L+ K ++ ++ + + + V +YS
Sbjct: 1962 RKHC--DKLTEEEKKEYDEKREKLKELINLLNKKKIKEEHTEE-EYKNMSVFKFKSLYSN 2018
Query: 633 FQHMLD-LLEDYLTFKKWQYERIDGK-VGGAERQIRIDRFNAKN 674
+Q D +LED + KW D K + E++ + +KN
Sbjct: 2019 YQDKADDILEDCIRSMKWDILIADKKKIIKKEKEKENKKIYSKN 2062
Score = 45 (20.9 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 215 ELSYDECYW--EYESDISAFQPEIE--RFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE 270
+L Y+ C + Y S + E+ + KIQ ++ N QK E + K K+
Sbjct: 730 QLHYENCKYVKNYASSYEKHKKEVAAYNYHKIQEQT-----NAQKKK----REHSGKFKK 780
Query: 271 FQQYEHSPEFL 281
+ E+SP F+
Sbjct: 781 IEALENSPLFM 791
Score = 45 (20.9 bits), Expect = 5.8e-32, Sum P(5) = 5.8e-32
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 679 CFLLSTRAGGLGINLATADTVIIYD 703
CF S++ G L I+ AT T Y+
Sbjct: 1501 CFRKSSQCGNLLIHCATCPTSFCYN 1525
Score = 44 (20.5 bits), Expect = 1.3e-55, Sum P(4) = 1.3e-55
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 59 ESENLMSCDTCTYAYHAKCL-----VPPLKAPPSGSWRCPECVSPLNDIDKILD-CEM 110
E + + C C +H +CL + + ++ C +C++ +DI + D C++
Sbjct: 17 EGDECIQCKQCKKKFHRECLQAEGLMDNEQLKDIKNYVCYQCINEDDDIPENEDRCKI 74
Score = 42 (19.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 21 DESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESEN 62
DE DD+ + E +K ++++ D DD +N
Sbjct: 870 DEDDDEEEDEVNYYNKRKDKKKKVISDDDDDDDDDENSNDDN 911
Score = 42 (19.8 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 406 KFDVLLTSYE--MINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYS 455
KF L ++Y+ ++ ++ +KW +I D+ +K + K + K YS
Sbjct: 2011 KFKSLYSNYQDKADDILEDCIRSMKWDILIADKKKIIKKEKEK--ENKKIYS 2060
Score = 40 (19.1 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 11 RSDRKPIYQLDESDDDADFE 30
R D+K D+ DDD D E
Sbjct: 886 RKDKKKKVISDDDDDDDDDE 905
Score = 37 (18.1 bits), Expect = 2.4e-31, Sum P(4) = 2.4e-31
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 179 NAEEDFVAIRPEWTTV 194
N EE FV P+W +
Sbjct: 449 NEEEFFVETIPKWQCI 464
>UNIPROTKB|C6KT82 [details] [associations]
symbol:PFF1185w "Smarca-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 352 (129.0 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 72/167 (43%), Positives = 110/167 (65%)
Query: 592 DIEDTNESFKQLLESSGKLQLLDKMMVKLKE-QGHRVLIYSQFQHMLDLLEDYLTFKKWQ 650
D++ + K ++ ++ D+ KL E + H+VLI++QFQ +LD LE+Y ++ W+
Sbjct: 1060 DLKLQTDEKKVVINIKNEMNDNDENGEKLGEAKMHKVLIFTQFQLVLDELEEYCKYRCWK 1119
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
Y R+DG R++ I FN +S F +L+STRAGGLGINL A+ VI+YD DWNP
Sbjct: 1120 YMRLDGSTNKLIRELDIREFNLSDSIYFIYLISTRAGGLGINLTAANHVIMYDEDWNPFI 1179
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
DLQA+ RAHR+GQ +V +++L+T ++EERM ++K+ L+ LVV
Sbjct: 1180 DLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAFRREQKLKLDKLVV 1226
Score = 197 (74.4 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 54/165 (32%), Positives = 83/165 (50%)
Query: 214 KELSYDECYWEYESDISAFQPEIERFIK-IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQ 272
K YD + + D+ E FI ++ +H+++C +S V S P +
Sbjct: 271 KSNKYDNDKYNSKKDVDMDSKEFNEFISSLEDEAHQNACKFIES----VFLSVYYPNG-R 325
Query: 273 QYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGER 332
+ E P + L P+Q +G+ +L S+ ILADEMGLGKTIQ++ FL+ L +
Sbjct: 326 KIERRP-LVDNVQLKPHQEDGVEWLLKSFLTGG-AILADEMGLGKTIQTLCFLSYLKCNK 383
Query: 333 IS-PHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
I PHL+V PLST+ NW RE + P + + G+ R +E
Sbjct: 384 IDGPHLIVVPLSTVGNWLREIHRFTPHLTCIKICGSKNERTHAKE 428
Score = 181 (68.8 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 37/100 (37%), Positives = 63/100 (63%)
Query: 407 FDVLLTSYEMI-NLDSASLKPI-KWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTG 464
+D+ +T+YE + N + ++ I KWQC+++DE HR+KN+ + S+ + R+LLTG
Sbjct: 437 YDLYVTTYETVKNEEEFFVETIPKWQCIVLDEAHRIKNQSGAIRHSMDRVVGNMRLLLTG 496
Query: 465 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQ 504
TPLQNN ELF L++F+ F + E ++ F + +Q +
Sbjct: 497 TPLQNNSAELFTLINFMFPDIFKNSEIIEQAFMNASQNNK 536
Score = 105 (42.0 bits), Expect = 5.7e-62, Sum P(4) = 5.7e-62
Identities = 40/117 (34%), Positives = 52/117 (44%)
Query: 47 IDAKDDSCQACGE-SENL--MSCDTCTYAYHAKCLVPPLKAPP-SGSWRCPECVSPLNDI 102
I +D C+ C E S NL + CD C +YH CL L A P S W CP C P D
Sbjct: 65 IPENEDRCKICREKSANLILLLCDGCPNSYHVSCL--GLAAEPESEKWYCPIC-KP--DD 119
Query: 103 DKILDCE-MRPTVAGDS-DVSKLGSKQIFVKQYLVKWKGLSY----LHCTWVPEKEF 153
K LD MR D+ + + S +V Q K G + H T +P+ +F
Sbjct: 120 HKNLDVRRMRKGFVLDNMNGEHVNSSTCYVCQRPGKLLGCDFCPNSFHPTCLPDLDF 176
Score = 96 (38.9 bits), Expect = 5.0e-61, Sum P(4) = 5.0e-61
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 53 SCQACGESENLMSCDTCTYAYHAKCLVPPLKAPP-SGSWRCPECVSPLNDIDKILDC-EM 110
+C C L+ CD C ++H CL P L S W CP C N+ D +L+
Sbjct: 146 TCYVCQRPGKLLGCDFCPNSFHPTCL-PDLDFDNISDQWECPCCK---NE-DPLLNQGHK 200
Query: 111 RPTVAGDSDVSKLGSKQI-FVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRL-----R 164
R T ++ K +++ F + ++K++ +L + ++ L+ F NPR+ +
Sbjct: 201 RWTKNEIQEIMKKRQRELGFWRSKIIKYRN-RFL----LAHRKDLQPFV-NPRVFSNLTK 254
Query: 165 TKVNN-FHRQMSSNNNAEEDF 184
T N+ FH + SSNN +
Sbjct: 255 TFKNDYFHTKGSSNNKKSNKY 275
Score = 73 (30.8 bits), Expect = 5.8e-32, Sum P(5) = 5.8e-32
Identities = 34/158 (21%), Positives = 70/158 (44%)
Query: 495 EFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTR 554
+ K +EE + + +L +LRR+K+ + LP K + + L + +YK +L
Sbjct: 586 DLKSAIKEEDLKSIRCLLDKIMLRRLKEQAIT-LPKKIFHDVWLPLGTLSAHWYKRLL-- 642
Query: 555 NYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLD 614
+ + + + L+ +V+++R +C HP + +E F++ ES + +
Sbjct: 643 DIRSMVEEKVSVKKLLGLVIKMRIICGHPKGIVSRPSQMEKLFAFFEE--ESEDIKEQVK 700
Query: 615 KMMVKLKE-QGHRVLIYSQFQHMLDLLEDYLTFKKWQY 651
+KLK G + S +D L L ++ +Y
Sbjct: 701 NDALKLKNISGEEHIESSSKLIFIDKLLCQLHYENCKY 738
Score = 50 (22.7 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 150 EKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEED 183
E+ F+ A ++N NN + + NNN ++D
Sbjct: 525 EQAFMNASQNNKNKSNNNNNNNNKDEKNNNNDDD 558
Score = 48 (22.0 bits), Expect = 1.6e-29, Sum P(4) = 1.6e-29
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 577 RKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVL----IYSQ 632
RK C + E + + ++ E K+L+ K ++ ++ + + + V +YS
Sbjct: 1962 RKHC--DKLTEEEKKEYDEKREKLKELINLLNKKKIKEEHTEE-EYKNMSVFKFKSLYSN 2018
Query: 633 FQHMLD-LLEDYLTFKKWQYERIDGK-VGGAERQIRIDRFNAKN 674
+Q D +LED + KW D K + E++ + +KN
Sbjct: 2019 YQDKADDILEDCIRSMKWDILIADKKKIIKKEKEKENKKIYSKN 2062
Score = 45 (20.9 bits), Expect = 1.1e-32, Sum P(4) = 1.1e-32
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 215 ELSYDECYW--EYESDISAFQPEIE--RFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKE 270
+L Y+ C + Y S + E+ + KIQ ++ N QK E + K K+
Sbjct: 730 QLHYENCKYVKNYASSYEKHKKEVAAYNYHKIQEQT-----NAQKKK----REHSGKFKK 780
Query: 271 FQQYEHSPEFL 281
+ E+SP F+
Sbjct: 781 IEALENSPLFM 791
Score = 45 (20.9 bits), Expect = 5.8e-32, Sum P(5) = 5.8e-32
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 679 CFLLSTRAGGLGINLATADTVIIYD 703
CF S++ G L I+ AT T Y+
Sbjct: 1501 CFRKSSQCGNLLIHCATCPTSFCYN 1525
Score = 44 (20.5 bits), Expect = 1.3e-55, Sum P(4) = 1.3e-55
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 59 ESENLMSCDTCTYAYHAKCL-----VPPLKAPPSGSWRCPECVSPLNDIDKILD-CEM 110
E + + C C +H +CL + + ++ C +C++ +DI + D C++
Sbjct: 17 EGDECIQCKQCKKKFHRECLQAEGLMDNEQLKDIKNYVCYQCINEDDDIPENEDRCKI 74
Score = 42 (19.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 21 DESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESEN 62
DE DD+ + E +K ++++ D DD +N
Sbjct: 870 DEDDDEEEDEVNYYNKRKDKKKKVISDDDDDDDDDENSNDDN 911
Score = 42 (19.8 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 406 KFDVLLTSYE--MINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYS 455
KF L ++Y+ ++ ++ +KW +I D+ +K + K + K YS
Sbjct: 2011 KFKSLYSNYQDKADDILEDCIRSMKWDILIADKKKIIKKEKEK--ENKKIYS 2060
Score = 40 (19.1 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 11 RSDRKPIYQLDESDDDADFE 30
R D+K D+ DDD D E
Sbjct: 886 RKDKKKKVISDDDDDDDDDE 905
Score = 37 (18.1 bits), Expect = 2.4e-31, Sum P(4) = 2.4e-31
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 179 NAEEDFVAIRPEWTTV 194
N EE FV P+W +
Sbjct: 449 NEEEFFVETIPKWQCI 464
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 374 (136.7 bits), Expect = 1.4e-61, Sum P(2) = 1.4e-61
Identities = 76/172 (44%), Positives = 111/172 (64%)
Query: 589 VEPDIEDTNESFK--QLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLT 645
+ P I + F +L++ GKLQ +D+++ +LK GHRVLI++Q MLD+LE +L
Sbjct: 1636 LHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLN 1695
Query: 646 FKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSD 705
+ Y R+DG +RQI ++RFN + FCF+LSTR+GG+GINL ADTVI YDSD
Sbjct: 1696 YHGHIYLRLDGSTRVEQRQILMERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSD 1754
Query: 706 WNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
WNP D QA R HR+GQT V I+RL++ +IE +++ +K +L + +
Sbjct: 1755 WNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAI 1806
Score = 356 (130.4 bits), Expect = 1.4e-61, Sum P(2) = 1.4e-61
Identities = 82/197 (41%), Positives = 121/197 (61%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F V +TSY+++ D S + KW+ +I+DE +KN S+ + L +ST R+LLTGTP
Sbjct: 1014 FHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTP 1073
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDI-------NQEEQ---ISRLHRMLAPHL 516
LQN+L EL+ LMHFL F S EF+E F + N E I+RLH+++ P L
Sbjct: 1074 LQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 517 LRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMEL 576
LRR+KK+V K++P K E ++ LS++Q+ Y+ ++R T + G +S+INV+M+L
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRAKTRETLQTGNLLSVINVLMQL 1193
Query: 577 RKLCCHPYMLEGVEPDI 593
RK+C HP M E P I
Sbjct: 1194 RKVCNHPNMFEA-RPTI 1209
Score = 38 (18.4 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 276 HSPEFLSGGSLHPYQLEGLNF 296
H F + ++ P+Q++G+ F
Sbjct: 1199 HPNMFEARPTISPFQMDGITF 1219
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 324 (119.1 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
Identities = 77/193 (39%), Positives = 116/193 (60%)
Query: 575 ELRKLCCH-PYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKL-KEQGHRVLIYSQ 632
EL KLCC+ P L + N+ + Q SGK+ L K++ + ++ +VLI+S
Sbjct: 923 ELHKLCCNFPNTLSKYQLH----NDEWMQ----SGKIDALKKLLKTIIVDKQEKVLIFSL 974
Query: 633 FQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGIN 692
F +LD+LE L+ +++ R+DG +RQ+ ID+F F+LST+AGG GIN
Sbjct: 975 FTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPI-FILSTKAGGFGIN 1033
Query: 693 LATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVL 752
L A+ VII+D +NPH D QA RAHR+GQT +V I LIT+ SIEE++ Q+ K K+ L
Sbjct: 1034 LVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLAL 1093
Query: 753 EHLVVGRLKAQNI 765
+ + K+Q++
Sbjct: 1094 DSYISEDKKSQDV 1106
Score = 236 (88.1 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
Identities = 63/160 (39%), Positives = 88/160 (55%)
Query: 406 KFDVLLTSYEMI---NLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLL 462
K+DV++T+Y + D + LK + ++ DEGH LKN S+ F+ L + R+LL
Sbjct: 671 KYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLL 730
Query: 463 TGTPLQNNLDELFMLMHFLDAGKFGSLEE-FQEEFK------DINQ-------EEQISRL 508
TGTPLQNNL EL L+ F+ F S +E F FK D N+ +E I+R
Sbjct: 731 TGTPLQNNLKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRA 790
Query: 509 HRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY 548
M+ P +LRR K V+K LPPK I EL++ QK+ Y
Sbjct: 791 KTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIY 830
Score = 205 (77.2 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
Identities = 57/175 (32%), Positives = 87/175 (49%)
Query: 203 EDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVT 262
E+++++Y + +++ YD+ + + D + F+ + +H S + V
Sbjct: 506 EEEDEDYNDEEEDVEYDDGDDDDDDD--------DEFVATRKNTHVISTTSRNGRKPIVK 557
Query: 263 ESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSI 322
KP+ SPE SL YQ G+N+L + + ILAD+MGLGKT Q I
Sbjct: 558 FFKGKPRLL-----SPEI----SLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVI 608
Query: 323 AFLASLFG-ERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIRE 376
+F A L PHLVV P STL NW REF +AP + + Y G+ Q R +R+
Sbjct: 609 SFFAYLKQINEPGPHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRD 663
Score = 104 (41.7 bits), Expect = 8.7e-48, Sum P(4) = 8.7e-48
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 502 EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYY-KAI-LTRNYQIL 559
+E I+R M+ P +LRR K V+K LPPK I EL++ QK+ Y K I + ++ +
Sbjct: 784 QEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRM 843
Query: 560 TRRG-----GAQISLI------NVVMELRKLCCHPYMLEGVEPD 592
+ G + S + N++M LRK HP + + D
Sbjct: 844 IKDGELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLFRNIYND 887
Score = 53 (23.7 bits), Expect = 2.9e-45, Sum P(3) = 2.9e-45
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 242 IQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGLNFLRFSW 301
I ++S + + KQK+S D + K++ +E P L+ S E L+ L ++
Sbjct: 154 INNKSSKITVAKQKTSIFDRYSNVINQKQYT-FE-LPTNLNIDS------EALSKLPVNY 205
Query: 302 SKQTHVILADEMGLGKTIQSIA 323
+K+ ++ AD+ +GK+ +S A
Sbjct: 206 NKKRRLVRADQHPIGKSYESSA 227
Score = 48 (22.0 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 6 ERLRVRSDRKPIYQLDESDDDADFE 30
E R+R+ KP DE DDD D E
Sbjct: 466 ETKRIRNTTKPKVVEDE-DDDVDLE 489
Score = 40 (19.1 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 490 EEFQEEFKDINQEEQ 504
++++EE +D N EE+
Sbjct: 503 DDYEEEDEDYNDEEE 517
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 431 (156.8 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 85/190 (44%), Positives = 126/190 (66%)
Query: 406 KFDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGT 465
++DV +TSYEM+ + + K W+ +++DE HR+KN+ SKL ++++ T +R+LLTGT
Sbjct: 264 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 323
Query: 466 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDIN---QEEQISRLHRMLAPHLLRRVKK 522
PLQNNL EL+ L++FL F S E+F F N ++ + RLH +L P LLRR+K
Sbjct: 324 PLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 383
Query: 523 DVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGA-QISLINVVMELRKLCC 581
DV K LPPKKE+ + V LS Q+E+Y IL ++ IL G ++ L+N++M+LRK C
Sbjct: 384 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQLRKCCN 443
Query: 582 HPYMLEGVEP 591
HPY+ +G EP
Sbjct: 444 HPYLFDGAEP 453
Score = 231 (86.4 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 50/139 (35%), Positives = 75/139 (53%)
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGSLHPYQLEGL 294
E + + + HR + +Q+ + +TES+K ++E SP ++ G L YQ+ GL
Sbjct: 116 EKQNLLSVGDYRHRRT--EQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGL 173
Query: 295 NFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERI--SPHLVVAPLSTLRNWEREF 352
N+L + + ILADEMGLGKT+Q+I+ L + R PH+V+ P STL NW EF
Sbjct: 174 NWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEF 233
Query: 353 ATWAPQMNVVMYVGTSQAR 371
W P + V +G R
Sbjct: 234 KRWVPTLRAVCLIGDKDQR 252
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 326 (119.8 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 65/166 (39%), Positives = 101/166 (60%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
K + SGKL L+K++ K K +G++ L+++QF MLD+LE +L + + R+DG
Sbjct: 1761 KDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKV 1820
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+RQ + +FN + S F F+ STR+G +GINL A+ VI YD+DWNP D QAM R HR
Sbjct: 1821 EQRQKIVTKFN-NDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHR 1879
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
+GQT V +FR + ++EE + + +K L+++ + N N
Sbjct: 1880 IGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNSN 1925
Score = 297 (109.6 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 68/188 (36%), Positives = 114/188 (60%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F + ++SY + D K +W+ +I+DE H +KN ++K ++ + + +L+TGTP
Sbjct: 762 FHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTP 821
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-IN----------QEEQISRLHRMLAPH 515
LQN+L+EL+ L+HFL F S +F+E F D +N +E I RLH ++ P+
Sbjct: 822 LQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPY 881
Query: 516 LLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT-RNYQILTRRGGAQISLINVVM 574
+LRR+KK+V KE+P K E I++ +L+ +Q+ Y + +N Q T G I L+N+++
Sbjct: 882 ILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQN-TLNTGNYIGLMNILI 940
Query: 575 ELRKLCCH 582
+LRK+C H
Sbjct: 941 QLRKVCNH 948
Score = 163 (62.4 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 37/89 (41%), Positives = 51/89 (57%)
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERI-SPHLVVAPL 342
+L YQ GL++L + + + ILADEMGLGKT+Q I+ L+ L + I PHLV+ P
Sbjct: 661 TLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPT 720
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQAR 371
S L NWE E + P ++ Y G R
Sbjct: 721 SILINWEIELKRFCPCFKILSYYGNQNER 749
Score = 47 (21.6 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 151 KEFLKAFKS--NPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDD--- 205
KE +K K + N + MSSNNN+E + ++VD EDD
Sbjct: 180 KEAIKKIKDARHNNAHELFENKYVSMSSNNNSE----IVNNNASSVDNGDKELKEDDLTD 235
Query: 206 --EKEYLVKYKELSYDECYWEYESDISAFQPE----IERFIK 241
E++YL+ + S DE E +I+ E IE +K
Sbjct: 236 QEEEDYLLDEQMSSTDESE-NKEEEINMLDDEANLPIEELLK 276
Score = 44 (20.5 bits), Expect = 6.6e-61, Sum P(5) = 6.6e-61
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ 254
+KE + K KEL ++DI E IK R RSSC KQ
Sbjct: 512 DKEKINKKKELIL------LKNDIENDSDETSEHIK---RDSRSSCQKQ 551
Score = 41 (19.5 bits), Expect = 5.9e-35, Sum P(5) = 5.9e-35
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 447 LFSSLKQYSTRHRVLLTGTPLQNN 470
LF +++Q+ RH ++ L NN
Sbjct: 1685 LFPNMEQFLKRHEKMIHNFTLINN 1708
Score = 40 (19.1 bits), Expect = 1.7e-60, Sum P(5) = 1.7e-60
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 164 RTKVNNFHRQMSSNNNAEED 183
RTK+ + S NNN+E D
Sbjct: 568 RTKIAK-SKPSSDNNNSEND 586
Score = 38 (18.4 bits), Expect = 8.9e-22, Sum P(4) = 8.9e-22
Identities = 28/117 (23%), Positives = 44/117 (37%)
Query: 131 KQYLVKWKGLSYLHCTWVP--EKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVA-I 187
K Y V L L +P K FL K TK N + NN D+ + +
Sbjct: 1520 KYYNVCMNNLYILRNERIPIFGKNFLDLIKKE---FTKDKNI--VYNYTNNVPIDYYSSV 1574
Query: 188 RPEWTT--VDRILACRGEDDEKEYLVKYKELSY----DECYWEYESDISAFQPEIER 238
+ W ++ R EK + K K+ + E Y E SD+ + ++E+
Sbjct: 1575 KEVWVEDICEKDNKKRKCKREKRWYKKIKKTNNPPEDSEVYRENSSDVEKYNCDVEK 1631
Score = 37 (18.1 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 99 LNDIDKILDCEMRPTVAGDSDVSKLGS 125
+N+I + RP G D+ LGS
Sbjct: 1 MNEIKSESLLQTRPFKLGIEDIQNLGS 27
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 326 (119.8 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 65/166 (39%), Positives = 101/166 (60%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
K + SGKL L+K++ K K +G++ L+++QF MLD+LE +L + + R+DG
Sbjct: 1761 KDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKMLDILEIFLNHLNYSFIRLDGSTKV 1820
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+RQ + +FN + S F F+ STR+G +GINL A+ VI YD+DWNP D QAM R HR
Sbjct: 1821 EQRQKIVTKFN-NDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHR 1879
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNIN 766
+GQT V +FR + ++EE + + +K L+++ + N N
Sbjct: 1880 IGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGNFNNSN 1925
Score = 297 (109.6 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 68/188 (36%), Positives = 114/188 (60%)
Query: 407 FDVLLTSYEMINLDSASLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTP 466
F + ++SY + D K +W+ +I+DE H +KN ++K ++ + + +L+TGTP
Sbjct: 762 FHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFNTKRWNIILSLKRDNCLLITGTP 821
Query: 467 LQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD-IN----------QEEQISRLHRMLAPH 515
LQN+L+EL+ L+HFL F S +F+E F D +N +E I RLH ++ P+
Sbjct: 822 LQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIEKSKIHHSKELIDRLHTVIRPY 881
Query: 516 LLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILT-RNYQILTRRGGAQISLINVVM 574
+LRR+KK+V KE+P K E I++ +L+ +Q+ Y + +N Q T G I L+N+++
Sbjct: 882 ILRRLKKNVEKEMPNKYEHIIKCKLTRRQQILYDEFINNKNVQN-TLNTGNYIGLMNILI 940
Query: 575 ELRKLCCH 582
+LRK+C H
Sbjct: 941 QLRKVCNH 948
Score = 163 (62.4 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 37/89 (41%), Positives = 51/89 (57%)
Query: 285 SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASL-FGERI-SPHLVVAPL 342
+L YQ GL++L + + + ILADEMGLGKT+Q I+ L+ L + I PHLV+ P
Sbjct: 661 TLRDYQHAGLHWLLYLYKNNINGILADEMGLGKTLQCISLLSYLAYYFNIWGPHLVIVPT 720
Query: 343 STLRNWEREFATWAPQMNVVMYVGTSQAR 371
S L NWE E + P ++ Y G R
Sbjct: 721 SILINWEIELKRFCPCFKILSYYGNQNER 749
Score = 47 (21.6 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 151 KEFLKAFKS--NPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACRGEDD--- 205
KE +K K + N + MSSNNN+E + ++VD EDD
Sbjct: 180 KEAIKKIKDARHNNAHELFENKYVSMSSNNNSE----IVNNNASSVDNGDKELKEDDLTD 235
Query: 206 --EKEYLVKYKELSYDECYWEYESDISAFQPE----IERFIK 241
E++YL+ + S DE E +I+ E IE +K
Sbjct: 236 QEEEDYLLDEQMSSTDESE-NKEEEINMLDDEANLPIEELLK 276
Score = 44 (20.5 bits), Expect = 6.6e-61, Sum P(5) = 6.6e-61
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 206 EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQ 254
+KE + K KEL ++DI E IK R RSSC KQ
Sbjct: 512 DKEKINKKKELIL------LKNDIENDSDETSEHIK---RDSRSSCQKQ 551
Score = 41 (19.5 bits), Expect = 5.9e-35, Sum P(5) = 5.9e-35
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 447 LFSSLKQYSTRHRVLLTGTPLQNN 470
LF +++Q+ RH ++ L NN
Sbjct: 1685 LFPNMEQFLKRHEKMIHNFTLINN 1708
Score = 40 (19.1 bits), Expect = 1.7e-60, Sum P(5) = 1.7e-60
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 164 RTKVNNFHRQMSSNNNAEED 183
RTK+ + S NNN+E D
Sbjct: 568 RTKIAK-SKPSSDNNNSEND 586
Score = 38 (18.4 bits), Expect = 8.9e-22, Sum P(4) = 8.9e-22
Identities = 28/117 (23%), Positives = 44/117 (37%)
Query: 131 KQYLVKWKGLSYLHCTWVP--EKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVA-I 187
K Y V L L +P K FL K TK N + NN D+ + +
Sbjct: 1520 KYYNVCMNNLYILRNERIPIFGKNFLDLIKKE---FTKDKNI--VYNYTNNVPIDYYSSV 1574
Query: 188 RPEWTT--VDRILACRGEDDEKEYLVKYKELSY----DECYWEYESDISAFQPEIER 238
+ W ++ R EK + K K+ + E Y E SD+ + ++E+
Sbjct: 1575 KEVWVEDICEKDNKKRKCKREKRWYKKIKKTNNPPEDSEVYRENSSDVEKYNCDVEK 1631
Score = 37 (18.1 bits), Expect = 3.2e-61, Sum P(5) = 3.2e-61
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 99 LNDIDKILDCEMRPTVAGDSDVSKLGS 125
+N+I + RP G D+ LGS
Sbjct: 1 MNEIKSESLLQTRPFKLGIEDIQNLGS 27
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 370 (135.3 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 122/403 (30%), Positives = 203/403 (50%)
Query: 252 NKQKSSPQDVTES--TKKPKEFQQYEHSP-EFLSGGSLHPYQLEGLNFLRFSWSKQTHVI 308
N+ + +DV E TK +E P L G+L YQ +GLN+L ++ T+ I
Sbjct: 659 NENRDDIKDVEEDAETKVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGI 718
Query: 309 LADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 366
LADEMGLGKTIQ+I+ LA L E+ + PHL+V P S L NWE EF +AP V+ Y G
Sbjct: 719 LADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYG 778
Query: 367 TSQARNIIREYEFYFPXXXXX--XXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA-- 422
+ Q R R+ + P + R ++ VL ++ + N S
Sbjct: 779 SPQQRKEKRK-GWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRW 837
Query: 423 -SLKPIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLD-ELFMLMHF 480
+L Q ++ G L+N ++L+S L Y + ++ G + D + F
Sbjct: 838 QALLNFNTQRRLLLTGTPLQNNLAELWSLL--YFLMPQTVIDGKKVSGFADLDAFQQWFG 895
Query: 481 LDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVEL 540
K +E Q +D ++ +++LH++L P+LLRR+K DV K++P K E I+ +L
Sbjct: 896 RPVDKI--IETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKL 953
Query: 541 SSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDTNESF 600
S +Q+ Y ++R T G +S++N +M+LRK+C HP + E V P + T+
Sbjct: 954 SKRQRFLYDDFMSRAQTKATLASGNFMSIVNCLMQLRKVCNHPNLFE-VRPIL--TSFVL 1010
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRV-LIYSQFQHMLDLLED 642
+ + S K +++ ++KL ++ ++V + F +++ L D
Sbjct: 1011 EHCVASDYKD--VERTLLKLFKKNNQVNRVDLDFLNLVFTLND 1051
Score = 348 (127.6 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 71/158 (44%), Positives = 103/158 (65%)
Query: 601 KQLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVG 659
K LL+ GKLQ L ++ +LK+ GHR LI++Q +LD+LE +L + + Y R+DG
Sbjct: 1238 KSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATK 1297
Query: 660 GAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 719
+RQI +RFN +S F+LS+R+GGLGINL ADTVI YDSDWNP D Q R H
Sbjct: 1298 IEDRQILTERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1356
Query: 720 RLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
R+GQT V I+R ++ +IE +++ +K L+++V+
Sbjct: 1357 RIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVI 1394
Score = 48 (22.0 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 20 LDESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESENL 63
L ESDDD D E E+ + V ++ S +A E+L
Sbjct: 483 LSESDDDMDDELSTSSDEDEEVDADVGLENSPASTEATPTDESL 526
Score = 46 (21.3 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 202 GEDDEKEYLVKYKELSYDECYWEYESDISAFQPEIERFIK-IQSRSHRSSCNKQKSSPQD 260
G + EY+ +K L D EY I + + R K I++ + + +K+ S Q
Sbjct: 265 GYESLHEYIASFKSLEDDLTLEEYNKYIDEQRRLLSRLKKGIENGALKY--DKETDSLQP 322
Query: 261 VTESTKKPKEFQQYEHSP 278
+T +K+ K Y+ P
Sbjct: 323 IT--SKEIKTIITYKPDP 338
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 362 (132.5 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 74/157 (47%), Positives = 104/157 (66%)
Query: 602 QLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
+L+E GKLQ L ++ +L HR LI++Q MLD+L+ +L+ +QY R+DG G
Sbjct: 1181 RLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGV 1240
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+RQ ++RFNA + FCF+LSTR+GG+G+NL ADTVI YDSDWNP D QA R HR
Sbjct: 1241 EQRQAMMERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHR 1299
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
+GQT V I+RLI+ +IEE +++ +K L L +
Sbjct: 1300 IGQTRNVSIYRLISERTIEENILRKATQKRRLGELAI 1336
Score = 359 (131.4 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 110/358 (30%), Positives = 174/358 (48%)
Query: 239 FIKIQSRSHRSSCNKQKSSPQDVTESTK-KPK----EFQQYEHSPEFLSGGSLHPYQLEG 293
++K+ S+ S +Q+ E+ K +PK E Q + FL G L YQ+ G
Sbjct: 509 YVKLNSQD---SDERQQELANIAEEALKFQPKGYTLETTQVKTPVPFLIRGQLREYQMVG 565
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLF-GERI-SPHLVVAPLSTLRNWERE 351
L+++ + K + ILADEMGLGKTIQ+I+ LA + E I PHL+V P S + NWE E
Sbjct: 566 LDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEME 625
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
F W P + ++ Y GT++ R R+ + P + + L+
Sbjct: 626 FKKWCPALKILTYFGTAKERAEKRK-GWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLI 684
Query: 412 TSYEMINLDSASLKPIKWQCMI-VDEGHRLKNKDSKLFSSLKQ-YSTRHRVLLTGTPLQN 469
E N+ + K +WQ ++ V RL + L +SL + +S H ++ T +
Sbjct: 685 LD-EAQNIKN--WKSQRWQALLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHD 741
Query: 470 NLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELP 529
+ + F + + E EF I RLH++L P +LRR+KK+V K+LP
Sbjct: 742 DFKDWF-------SNPLTGMMEGNMEFN----APLIGRLHKVLRPFILRRLKKEVEKQLP 790
Query: 530 PKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLE 587
K E I+ LS +Q+ Y ++R + G +S++N+VM+LRK C HP + E
Sbjct: 791 EKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSGNMMSVLNIVMQLRKCCNHPNLFE 848
Score = 53 (23.7 bits), Expect = 5.6e-61, Sum P(3) = 5.6e-61
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 1 MSSLVERLRVRSDRKPIYQLDESDDDADFEQGKPGTTVEKFERIVRIDA-----KDDSCQ 55
MS++V+ V S + P D D D +F+ PG+ E + +A K+D Q
Sbjct: 346 MSNIVQEGLVSSSKSPSIASDRDDKDEEFKA--PGSDSESDDEQTIANAEKSQKKEDVRQ 403
Query: 56 ACGESENLMSCDTCTYAYHAKCLVPP--LKA 84
+N + D + Y +PP LKA
Sbjct: 404 EVDALQNEATVDMDDFLY----TLPPEYLKA 430
Score = 45 (20.9 bits), Expect = 3.9e-60, Sum P(3) = 3.9e-60
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 35 GTTVEKFERIVRIDAKDDSC--QACGESENLMSCD 67
G T E E + R ++ +ACG++E M D
Sbjct: 432 GLTQEDLEEMKREKLEEQKARKEACGDNEEKMEID 466
Score = 37 (18.1 bits), Expect = 2.6e-59, Sum P(3) = 2.6e-59
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 233 QPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYE 275
Q EIER + + + R C +D ST K + + E
Sbjct: 280 QIEIERAAEREIKEKRKMCAGIAKMVRDFWSSTDKVVDIRAKE 322
Score = 37 (18.1 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 731 RLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQN 764
+L+ I ++ M++ L HL GR+ ++
Sbjct: 1781 QLVASDPISKKTMKVDLSHTELSHLRKGRMTTES 1814
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 381 (139.2 bits), Expect = 3.1e-60, Sum P(2) = 3.1e-60
Identities = 76/168 (45%), Positives = 109/168 (64%)
Query: 605 ESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQ 664
+ +GKLQ L ++ +LK +GHRVLI++Q MLD+LE +LT+ Y R+DG +RQ
Sbjct: 2028 DCAGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQ 2087
Query: 665 IRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 724
++RFNA + FCF+LSTR+GG+G+NL ADTV+ YDSDWNP D QA R HR+GQT
Sbjct: 2088 ALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQT 2146
Query: 725 NKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNINQVTI 770
V I+RLI+ ++EE +++ +K +L + + G Q TI
Sbjct: 2147 RDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTI 2194
Score = 336 (123.3 bits), Expect = 3.1e-60, Sum P(2) = 3.1e-60
Identities = 116/418 (27%), Positives = 189/418 (45%)
Query: 175 SSNNNAEEDFVAIRPEWTTVDRILACRGEDDEKEYLVKYKELSYDECYWEYESDISAFQP 234
S + +E D + D G+DD+ ++ V+Y L+ D+ E + P
Sbjct: 524 SQSEESESDESEDAQSQSQADEEQEDEGDDDDDDFGVEYL-LARDDERSEVDGGSGPPTP 582
Query: 235 EIERFIKIQSRSHRSSCNKQKSSPQDVTESTKKPKEFQQYEHSP-EFLSGGSLHPYQLEG 293
+ + + + P+ T +T + K +P L G L YQ G
Sbjct: 583 GPTTTLGPKKEITDIAAAAESLQPKGYTLATTQVK-------TPIPLLLRGQLREYQHIG 635
Query: 294 LNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAPLSTLRNWERE 351
L++L + K+ + ILADEMGLGKTIQ+I+ LA L E+ + PHL++ P S + NWE E
Sbjct: 636 LDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEME 695
Query: 352 FATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLL 411
W P ++ Y G + R + R+ + P R + L+
Sbjct: 696 LKRWCPSFKILTYYGAQKERKLKRQ-GWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLI 754
Query: 412 TSYEMINLDSASLKPIKWQCMI-VDEGHRLKNKDSKLFSSLKQ-YSTRHRVLLTGTPLQN 469
E N+ + K +WQ ++ + RL + L +SL + +S H L Q+
Sbjct: 755 LD-EAQNIKN--FKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMH--FLMPHVFQS 809
Query: 470 NLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELP 529
+ + + G +E QE E + RLH++L P LLRRVK DV K++P
Sbjct: 810 HRE----FKEWFSNPLTGMIEGSQEY-----NEGLVKRLHKVLRPFLLRRVKVDVEKQMP 860
Query: 530 PKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLE 587
K E ++R LS +Q+ Y + + T G +S+IN++M+LRK+C HP + +
Sbjct: 861 KKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKVCNHPNLFD 918
Score = 52 (23.4 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 26/94 (27%), Positives = 43/94 (45%)
Query: 198 LACRGEDDEKEYLVKYK-ELSYDECY-----WEYESDISAFQPEIERFIKIQSRSHRSSC 251
LA GE +E L +Y +YD E E ++ A + E ++ ++R +
Sbjct: 437 LAREGELSMEELLQQYAGAYAYDASAPGSGNSEDEEEVEANSSDCE--LE-ETRDVEEAA 493
Query: 252 NKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGGS 285
+ SS D S ++ E ++ EHS E +SG S
Sbjct: 494 QEDSSSQSD---SAEEHSEDEEDEHSEEEMSGSS 524
Score = 47 (21.6 bits), Expect = 7.1e-30, Sum P(2) = 7.1e-30
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 78 LVPPLKAPPSGSWRC--PECVSPLND-IDKILDCEMRP 112
++PP++APP C P ++P + L CE+ P
Sbjct: 1966 VMPPVEAPPPSLHACHPPPWLAPHQAAFQEQLACELWP 2003
Score = 38 (18.4 bits), Expect = 6.2e-29, Sum P(2) = 6.2e-29
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 488 SLEEFQEEFKDINQEEQIS 506
S EE E+ +D + EE++S
Sbjct: 503 SAEEHSEDEEDEHSEEEMS 521
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 355 (130.0 bits), Expect = 3.5e-60, Sum P(2) = 3.5e-60
Identities = 71/153 (46%), Positives = 110/153 (71%)
Query: 601 KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGG 660
K+L+ SGK +L+K++ +K++G RV+++SQF MLD++E +L + +Y R+DGK
Sbjct: 824 KELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQI 883
Query: 661 AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR 720
+ER ID FN + F FLLST+AGGLGINL +A+ VI++D D NP+ D QA R HR
Sbjct: 884 SERIHLIDEFNT-DMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHR 942
Query: 721 LGQTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
+GQT +V + +LI +G+IEE M++++++K+ LE
Sbjct: 943 VGQTKEVKVIKLIGKGTIEESMLKISQQKLRLE 975
Score = 349 (127.9 bits), Expect = 3.5e-60, Sum P(2) = 3.5e-60
Identities = 112/384 (29%), Positives = 189/384 (49%)
Query: 208 EYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVTESTKK 267
E + K LS D W+ ++ I E E +K+ ++ S K Q +TE +
Sbjct: 405 EKMTKSNGLSED-LIWDCQTLIK----EREVVMKLMNKCEEISRTLTKQVTQ-LTEDGEC 458
Query: 268 PKEFQQYEHSPEFLSGGS-LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLA 326
+Q P +S L PYQ GLN+L + ++ILADEMGLGKT+Q+IAFLA
Sbjct: 459 GWNIEQ----PSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLA 514
Query: 327 SLF--GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXX 384
L+ G+ PHLVV P ST+ NW REF W P MN+++Y G+ + R +R Y+
Sbjct: 515 HLYVTGDS-GPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLR-YDI-LNKV 571
Query: 385 XXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA--SLKPIKWQ-CMIVDEGHRLK 441
+DR F L ++ + + ++ I++Q M ++ RL
Sbjct: 572 VEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLL 631
Query: 442 NKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQ 501
+ + ++L + + ++ ++ E+ L + K S +E + I +
Sbjct: 632 LTGTPVQNNLLELMSLLNFVMPHM-FSSSTSEIKRLF----SSKAKSTDE-----QTIFE 681
Query: 502 EEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTR 561
+E+I+ +++ P +LRRVK +V+K+LPPK++ I ++S KQ++ Y +L + + +
Sbjct: 682 KERIAHAKQIMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDA 741
Query: 562 RGGAQISLINVVMELRKLCCHPYM 585
L NV+M LRK+ HP +
Sbjct: 742 TE-KNSELCNVMMHLRKMANHPLL 764
Score = 37 (18.1 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 488 SLEEFQEEFKDINQEE 503
S+++ Q F D+++EE
Sbjct: 225 SVKKLQRHFPDLDKEE 240
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 353 (129.3 bits), Expect = 7.0e-59, Sum P(2) = 7.0e-59
Identities = 73/151 (48%), Positives = 106/151 (70%)
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
+L SGKL LL +++ LKE+G RV+++SQF MLD+LE +L K +Y R+DG ++
Sbjct: 777 VLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSD 836
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R ID+FN + F FLLSTRAGGLGINL +A+ VI++D D NP+ D QA R HR+G
Sbjct: 837 RIGLIDQFNT-DQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVG 895
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
QT V + +LI++ SIE+ M+++ ++K+ LE
Sbjct: 896 QTKTVKVIKLISKDSIEDTMLRIGERKLKLE 926
Score = 338 (124.0 bits), Expect = 7.0e-59, Sum P(2) = 7.0e-59
Identities = 103/333 (30%), Positives = 162/333 (48%)
Query: 259 QDVTESTKK-PKEFQQYEHSPEFLSGG-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLG 316
QDVT+ K P Q PE LS L PYQL GLN+L + ILADEMGLG
Sbjct: 404 QDVTQVMDKGPGSMTQ----PEILSSTFQLKPYQLIGLNWLVLLHQNKLSGILADEMGLG 459
Query: 317 KTIQSIAFLASLFGE-RISPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIR 375
KTIQ+I+FLA L+ E PHL+ P STL NW RE W P V++Y G++ R +R
Sbjct: 460 KTIQAISFLAHLYQEGNHGPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMR 519
Query: 376 EYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA--SLKPIKWQ-CM 432
YE DR F L Y + + ++ ++++ M
Sbjct: 520 -YEI-LNQIVEYNIIVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLM 577
Query: 433 IVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEF 492
++ +RL + L ++L + + ++ ++ ++ + S EE
Sbjct: 578 AINAKYRLLLTGTPLQNNLLELMSLLNFIMPNM-FSSSTSQIAKMF------SMKSSEE- 629
Query: 493 QEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAIL 552
Q F + ++I+ ++ P +LRRVK +V+K+LP K+E + +S +Q+E Y A+L
Sbjct: 630 QSSF----ERDRITHAKLIMKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALL 685
Query: 553 TRNYQILTRRGGAQISLINVVMELRKLCCHPYM 585
+++ G + L NV+M+LRK+ HP +
Sbjct: 686 ---HKLKHSSNGEKRELTNVMMQLRKMSNHPLL 715
Score = 274 (101.5 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 80/250 (32%), Positives = 135/250 (54%)
Query: 405 IKFDVLLTSYEMI--NLDSASLK-PIKWQCMIVDEGHRLKNKDSKLFSSLKQYSTRHRVL 461
+++++++++Y + N SL +K + + DEGH LKN +S + L + ++R+L
Sbjct: 527 VEYNIIVSTYNLAIGNSSDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLL 586
Query: 462 LTGTPLQNNLDELFMLMHFLDAGKFGS-LEEFQEEFKDINQEEQIS----RL-HRMLA-- 513
LTGTPLQNNL EL L++F+ F S + + F + EEQ S R+ H L
Sbjct: 587 LTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKLIMK 646
Query: 514 PHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVV 573
P +LRRVK +V+K+LP K+E + +S +Q+E Y A+L +++ G + L NV+
Sbjct: 647 PFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALL---HKLKHSSNGEKRELTNVM 703
Query: 574 MELRKLCCHPYMLEGVEPDIEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQF 633
M+LRK+ HP + +Q + KL+ + K+M LKE HR +
Sbjct: 704 MQLRKMSNHPLL--------------HRQFYTTE-KLKAMSKLM--LKEPSHRDADPALI 746
Query: 634 QHMLDLLEDY 643
+ +++L D+
Sbjct: 747 KEDMEVLSDF 756
Score = 55 (24.4 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 484 GKFGSLEEFQEEF-KDINQEEQISRLHRMLAPHLLRRVKKDVMKE 527
G+ + ++ +EE + +QE + +L R PHL + +DV++E
Sbjct: 159 GRVSAADDSEEEGQRSKDQERMLRKLQRKF-PHLNKNELRDVLQE 202
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 379 (138.5 bits), Expect = 1.6e-58, Sum P(3) = 1.6e-58
Identities = 76/165 (46%), Positives = 107/165 (64%)
Query: 608 GKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRI 667
GKLQ L ++ +LK +GHRVLI++Q MLD+LE +LT+ Y R+DG +RQ +
Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102
Query: 668 DRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 727
+RFNA + FCF+LSTR+GG+G+NL ADTV+ YDSDWNP D QA R HR+GQT V
Sbjct: 2103 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 728 MIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNINQVTI 770
I+RLI+ ++EE +++ +K +L + + G Q TI
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTI 2206
Score = 333 (122.3 bits), Expect = 1.6e-58, Sum P(3) = 1.6e-58
Identities = 97/308 (31%), Positives = 151/308 (49%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAP 341
G L YQ GL++L + K+ + ILADEMGLGKTIQ+I+ LA L E+ + PHL++ P
Sbjct: 616 GQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVP 675
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXX 401
S + NWE E W P ++ Y G + R + R+ + P
Sbjct: 676 TSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ-GWTKPNAFHVCITSYKLVLQDHQA 734
Query: 402 QDRIKFDVLLTSYEMINLDSASLKPIKWQCMI-VDEGHRLKNKDSKLFSSLKQ-YSTRHR 459
R + L+ E N+ + K +WQ ++ + RL + L +SL + +S H
Sbjct: 735 FRRKNWRYLILD-EAQNIKN--FKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMH- 790
Query: 460 VLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRR 519
L Q++ + + G +E QE E + RLH++L P LLRR
Sbjct: 791 -FLMPHVFQSHRE----FKEWFSNPLTGMIEGSQEY-----NEGLVKRLHKVLRPFLLRR 840
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKL 579
VK DV K++P K E ++R LS +Q+ Y + + T G +S+IN++M+LRK+
Sbjct: 841 VKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKV 900
Query: 580 CCHPYMLE 587
C HP + +
Sbjct: 901 CNHPNLFD 908
Score = 42 (19.8 bits), Expect = 1.6e-58, Sum P(3) = 1.6e-58
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 181 EEDFVAIRPEWTTVDRILACR----GEDD---EKEYLVKYKELSYDECYWEYESDISAFQ 233
+E+F A E + +A GE D E L + ELS +E +Y +
Sbjct: 400 DEEFTANEEEAEDEEDTIAAEEQLEGEVDHAMELSELAREGELSMEELLQQYAGAYAPGS 459
Query: 234 PEIERFIKIQSRSHRSSCNKQ-----KSSPQD----VTESTKKPKEFQQYEHSPEFLSGG 284
E + + ++ S C + + PQ+ ++S + E ++ EHS E + G
Sbjct: 460 GSSEDEDEDEVDANSSDCEPEGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSG 519
Query: 285 S 285
S
Sbjct: 520 S 520
Score = 41 (19.5 bits), Expect = 6.6e-28, Sum P(3) = 6.6e-28
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 78 LVPPLKAPPSGSWRC--PECVSP 98
++PP++APP C P ++P
Sbjct: 1979 VMPPVEAPPPSLHACHPPPWLAP 2001
Score = 40 (19.1 bits), Expect = 2.6e-58, Sum P(3) = 2.6e-58
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 21 DESDDDADFEQGKPGTTVEKFERIVRIDAKDDSCQACGESEN 62
DE D+ ++ E+ + E+ E DA+ S QA E E+
Sbjct: 506 DEEDEHSEEEETSGSSASEESESEESEDAQSQS-QADEEEED 546
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 379 (138.5 bits), Expect = 2.0e-58, Sum P(3) = 2.0e-58
Identities = 76/165 (46%), Positives = 107/165 (64%)
Query: 608 GKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAERQIRI 667
GKLQ L ++ +LK +GHRVLI++Q MLD+LE +LT+ Y R+DG +RQ +
Sbjct: 2054 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2113
Query: 668 DRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 727
+RFNA + FCF+LSTR+GG+G+NL ADTV+ YDSDWNP D QA R HR+GQT V
Sbjct: 2114 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2172
Query: 728 MIFRLITRGSIEERMMQMTKKKMVLEHLVV--GRLKAQNINQVTI 770
I+RLI+ ++EE +++ +K +L + + G Q TI
Sbjct: 2173 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTI 2217
Score = 333 (122.3 bits), Expect = 2.0e-58, Sum P(3) = 2.0e-58
Identities = 97/308 (31%), Positives = 151/308 (49%)
Query: 284 GSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGERIS--PHLVVAP 341
G L YQ GL++L + K+ + ILADEMGLGKTIQ+I+ LA L E+ + PHL++ P
Sbjct: 624 GQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVP 683
Query: 342 LSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXX 401
S + NWE E W P ++ Y G + R + R+ + P
Sbjct: 684 TSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ-GWTKPNAFHVCITSYKLVLQDHQA 742
Query: 402 QDRIKFDVLLTSYEMINLDSASLKPIKWQCMI-VDEGHRLKNKDSKLFSSLKQ-YSTRHR 459
R + L+ E N+ + K +WQ ++ + RL + L +SL + +S H
Sbjct: 743 FRRKNWRYLILD-EAQNIKN--FKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELWSLMH- 798
Query: 460 VLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRR 519
L Q++ + + G +E QE E + RLH++L P LLRR
Sbjct: 799 -FLMPHVFQSHRE----FKEWFSNPLTGMIEGSQEY-----NEGLVKRLHKVLRPFLLRR 848
Query: 520 VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKL 579
VK DV K++P K E ++R LS +Q+ Y + + T G +S+IN++M+LRK+
Sbjct: 849 VKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRKV 908
Query: 580 CCHPYMLE 587
C HP + +
Sbjct: 909 CNHPNLFD 916
Score = 41 (19.5 bits), Expect = 2.0e-58, Sum P(3) = 2.0e-58
Identities = 27/128 (21%), Positives = 45/128 (35%)
Query: 150 EKEFLKAFKSNPRLRTKVNNFHRQMSSNNNAEEDFVAIRPEWTTVDRILACR----GEDD 205
E+E + K P V ++Q + +E+F A E + +A GE D
Sbjct: 372 EEEPSQVLKVKPP--PSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIAAEEQLEGEVD 429
Query: 206 ---EKEYLVKYKELSYDECYWEYESDISAFQPEIERFIKIQSRSHRSSCNKQKSSPQDVT 262
E L + ELS +E Y ++ + N P+ T
Sbjct: 430 HAMELSELAREGELSMEELLQRYAGAYASDASAPGSGSSEEEDEDEVEANSSDCEPEGAT 489
Query: 263 ESTKKPKE 270
E+ + P+E
Sbjct: 490 EAEEAPQE 497
Score = 41 (19.5 bits), Expect = 5.2e-29, Sum P(2) = 5.2e-29
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 78 LVPPLKAPPSGSWRC--PECVSP 98
++PP++APP C P ++P
Sbjct: 1990 VMPPVEAPPPSLHACHPPPWLAP 2012
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 358 (131.1 bits), Expect = 6.0e-58, Sum P(2) = 6.0e-58
Identities = 76/163 (46%), Positives = 114/163 (69%)
Query: 593 IEDTNESFKQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQ-- 650
+ D Q+L+S GK ++L++++ LKE+G RV+++SQF +LD+LE +L K WQ
Sbjct: 777 VSDFKLDMDQILDS-GKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFL--KHWQHR 833
Query: 651 YERIDGKVGGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 710
Y R+DGK ++R ID FN + F FLLST+AGGLGINL +A+ VI++D D NP+
Sbjct: 834 YIRLDGKTQISDRIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYN 892
Query: 711 DLQAMARAHRLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
D QA R HR+GQT +V + +LI++G+IEE M++M ++K+ LE
Sbjct: 893 DKQAEDRCHRVGQTREVKVIKLISKGTIEESMLKMNQQKLKLE 935
Score = 324 (119.1 bits), Expect = 6.0e-58, Sum P(2) = 6.0e-58
Identities = 112/402 (27%), Positives = 194/402 (48%)
Query: 194 VDRILACRGEDDEKEYLVKYKELS--YDECYWEYESDISAFQPEIERFIKIQSRSHRSSC 251
V +I+A R + + L K + + ++ W ++ + E + +K+ ++ S
Sbjct: 347 VQKIIALRPFNSWEALLSKITKTAGLSEDIVWNCKTLLK----ERDVVLKLMNKCEEIS- 401
Query: 252 NKQKSSPQDVTESTKKPKEFQQYEHSPEFLSGG-SLHPYQLEGLNFLRFSWSKQTHVILA 310
NK +TE +Q P L+ L PYQ GLN+L + ILA
Sbjct: 402 NKLTKQVTKITEDGGCRWNIEQ----PSVLNQSLELKPYQKIGLNWLALLHKHGLNGILA 457
Query: 311 DEMGLGKTIQSIAFLASLF--GERISPHLVVAPLSTLRNWEREFATWAPQMNVVMY-VGT 367
DEMGLGKTIQ+IAFLA ++ G+R PHL+V P STL NW RE W P++NV+ Y VG+
Sbjct: 458 DEMGLGKTIQAIAFLAHIYQEGDR-GPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGS 516
Query: 368 SQARNIIREYEFYFPXXXXXXXXXXXXXXXXXXXQDRIKFDVLLTSYEMINLDSA--SLK 425
+ R +R DR F + +Y + + ++
Sbjct: 517 QEDRKHLRAD--ISNRVVDFNVIVTTYNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMS 574
Query: 426 PIKWQ-CMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAG 484
+++Q M ++ HRL + + ++L + + ++ ++ E+ +
Sbjct: 575 SVRYQQLMRINAKHRLLLTGTPVQNNLLELMSLLNFVMPHM-FSSSTSEIRRM------- 626
Query: 485 KFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQ 544
F S + EE + ++E+I+ +++ P +LRRVK +V+K+LPPKK+ I +S KQ
Sbjct: 627 -FSSKAKTAEE-QSTYEKERIAHAKQIIKPFILRRVKDEVLKQLPPKKDHIELCAMSEKQ 684
Query: 545 KEYYKAILTRNYQILTRRGGAQIS-LINVVMELRKLCCHPYM 585
++ Y +L + + T +G + S + N +M+LRK+ HP +
Sbjct: 685 EQLYCDLLNKLKK--TMKGNEKNSDMGNAMMQLRKMANHPLL 724
Score = 40 (19.1 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 348 WEREFATWAPQMNVVMYVGTSQARNIIREYEFYF 381
WER+ N + + R+++RE+ + F
Sbjct: 183 WERQEMLVEKLQNTFPGMDKEELRDVLREHNWVF 216
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 354 (129.7 bits), Expect = 6.7e-58, Sum P(2) = 6.7e-58
Identities = 104/334 (31%), Positives = 172/334 (51%)
Query: 278 PEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE--RISP 335
P L G +L PYQ +GLN+L ++ T+ ILADEMGLGKTIQ+I+ LA L E + P
Sbjct: 816 PSLLRG-TLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGP 874
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
HL++ P S + NWE EF +AP V+ Y G+ Q R R+ + P
Sbjct: 875 HLIIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRK-GWNKPDAFHVCITSYQLV 933
Query: 396 XXXXXXQDRIKFDVLLTSYEMINLDSASLKPIKWQCMI-VDEGHRLKNKDSKLFSSLKQY 454
R ++ ++ E N+ + + +W+ ++ + +RL + L ++L +
Sbjct: 934 VQDQQSFKRRRWTYMILD-EAHNIKN--FRSTRWRALLNFNTENRLLLTGTPLQNNLMEL 990
Query: 455 STRHRVLLTGTPLQN-------NLDEL---F-----MLMHFLDAGKFGSLEEFQEEFKDI 499
+ L+ + + NLD+ F ++ AG ++E + + +
Sbjct: 991 WSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKM 1050
Query: 500 NQEEQ--ISRLHRMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQ 557
++E + ++RLH++L P+LLRR+KKDV K++P K E I+ LS +Q+ Y ++R
Sbjct: 1051 DEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKT 1110
Query: 558 ILTRRGGAQISLINVVMELRKLCCHPYMLEGVEP 591
T G +S+IN +M+LRK+C HP + E V P
Sbjct: 1111 KETLASGNFLSIINCLMQLRKVCNHPDLFE-VRP 1143
Score = 335 (123.0 bits), Expect = 6.7e-58, Sum P(2) = 6.7e-58
Identities = 68/158 (43%), Positives = 101/158 (63%)
Query: 601 KQLLE-SSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVG 659
K LL+ GKLQ L ++ +L QGHR LI++Q +LD+LE +L ++Y R+DG
Sbjct: 1358 KTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGATK 1417
Query: 660 GAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAH 719
+RQ+ ++FN ++ F+LSTR+GGLGINL ADTVI YDSDWNP D Q R H
Sbjct: 1418 IEDRQLLTEKFN-RDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCH 1476
Query: 720 RLGQTNKVMIFRLITRGSIEERMMQMTKKKMVLEHLVV 757
R+GQ V I+R ++ +IE +++ +K L+++V+
Sbjct: 1477 RIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVI 1514
Score = 42 (19.8 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 15/68 (22%), Positives = 34/68 (50%)
Query: 461 LLTGTPLQNNLDEL-FMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRMLAPHLLRR 519
L+T P Q+ +++L +L+ F ++ + +Q ++ Q E +L ++ + LR
Sbjct: 1201 LMTTEPFQDQINKLKILLVEFENSDPINYVSYYQRLRRE-EQAEIKEKLEHVVYLNNLRC 1259
Query: 520 VKKDVMKE 527
+K + E
Sbjct: 1260 GRKPIYGE 1267
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 344 (126.2 bits), Expect = 7.3e-58, Sum P(2) = 7.3e-58
Identities = 71/151 (47%), Positives = 108/151 (71%)
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L+ SGK ++L ++ +LK++G RV+++SQF MLD+LE L + +Y R+DGK +E
Sbjct: 852 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 911
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R ID FN + F FLLST+AGGLGINL +A+ VI++D D NP+ D QA R HR+G
Sbjct: 912 RIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 970
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
QT +V++ +LI++G+IEE M+++ ++K+ LE
Sbjct: 971 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 1001
Score = 339 (124.4 bits), Expect = 7.3e-58, Sum P(2) = 7.3e-58
Identities = 98/314 (31%), Positives = 158/314 (50%)
Query: 278 PEFLSGG-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE-RISP 335
P L+ SL PYQ GLN+L + ILADEMGLGKTIQ+IAFLA L+ E P
Sbjct: 491 PSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGP 550
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
HL+V P ST+ NW RE W P + V+ Y G+ + R IR Y +
Sbjct: 551 HLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-YNIH-SKYEEYNVIVTTYN 608
Query: 396 XXXXXXQDRIKFDVLLTSYEMINLDSASLK---PIKWQ-CMIVDEGHRLKNKDSKLFSSL 451
DR F L +Y + + + LK I++Q M ++ +RL + + ++L
Sbjct: 609 CAISSSDDRSLFRRLKLNYAIFD-EGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL 667
Query: 452 KQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRM 511
+ + ++ ++ E+ + + K S +E + I ++E+I+ ++
Sbjct: 668 LELMSLLNFVMPHM-FSSSTSEIRRMF----SSKTKSADE-----QSIYEKERIAHAKQI 717
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLIN 571
+ P +LRRVK++V+K+LPPKK+ I +S KQ++ Y + R + + + N
Sbjct: 718 IKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNME-KNTEMCN 776
Query: 572 VVMELRKLCCHPYM 585
V+M+LRK+ HP +
Sbjct: 777 VMMQLRKMANHPLL 790
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 344 (126.2 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 71/151 (47%), Positives = 108/151 (71%)
Query: 603 LLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLTFKKWQYERIDGKVGGAE 662
L+ SGK ++L ++ +LK++G RV+++SQF MLD+LE L + +Y R+DGK +E
Sbjct: 849 LILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISE 908
Query: 663 RQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLG 722
R ID FN + F FLLST+AGGLGINL +A+ VI++D D NP+ D QA R HR+G
Sbjct: 909 RIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVG 967
Query: 723 QTNKVMIFRLITRGSIEERMMQMTKKKMVLE 753
QT +V++ +LI++G+IEE M+++ ++K+ LE
Sbjct: 968 QTKEVLVIKLISQGTIEESMLKINQQKLKLE 998
Score = 337 (123.7 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 98/314 (31%), Positives = 159/314 (50%)
Query: 278 PEFLSGG-SLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFGE-RISP 335
P L+ SL PYQ GLN+L + ILADEMGLGKTIQ+IAFLA L+ E P
Sbjct: 488 PSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGP 547
Query: 336 HLVVAPLSTLRNWEREFATWAPQMNVVMYVGTSQARNIIREYEFYFPXXXXXXXXXXXXX 395
HL+V P ST+ NW RE W P + V+ Y G+ + R IR Y +
Sbjct: 548 HLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-YNIH-SKYEEYNVIVTTYN 605
Query: 396 XXXXXXQDRIKFDVLLTSYEMINLDSASLK---PIKWQ-CMIVDEGHRLKNKDSKLFSSL 451
DR F L +Y + + + LK I++Q M ++ +RL + + ++L
Sbjct: 606 CAISSSDDRSLFRRLKLNYAIFD-EGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNL 664
Query: 452 KQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHRM 511
+ + ++ ++ E+ + + K S +E + I ++E+I+ ++
Sbjct: 665 LELMSLLNFVMPHM-FSSSTSEIRRMF----SSKTKSADE-----QSIYEKERIAHAKQI 714
Query: 512 LAPHLLRRVKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLIN 571
+ P +LRRVK++V+K+LPPKK+ I +S KQ++ Y + R + + + + N
Sbjct: 715 IKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEKST-EMCN 773
Query: 572 VVMELRKLCCHPYM 585
V+M+LRK+ HP +
Sbjct: 774 VMMQLRKMANHPLL 787
WARNING: HSPs involving 476 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 819 800 0.00097 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 726
No. of states in DFA: 634 (67 KB)
Total size of DFA: 440 KB (2209 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 75.17u 0.15s 75.32t Elapsed: 00:00:04
Total cpu time: 75.27u 0.15s 75.42t Elapsed: 00:00:04
Start: Tue May 21 08:43:11 2013 End: Tue May 21 08:43:15 2013
WARNINGS ISSUED: 2