Query 003452
Match_columns 819
No_of_seqs 564 out of 3434
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 23:41:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003452.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003452hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 3E-182 6E-187 1515.9 50.4 786 21-816 14-1017(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 1E-128 3E-133 1086.1 50.1 695 100-806 8-967 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 9E-123 2E-127 1137.2 82.1 722 74-806 16-940 (941)
4 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-113 3E-118 1050.1 78.8 673 100-805 8-880 (884)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 2E-113 4E-118 1054.4 78.0 693 100-805 11-1045(1053)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-111 4E-116 1040.2 79.3 702 100-806 21-984 (997)
7 PRK15122 magnesium-transportin 100.0 3E-110 6E-115 1016.0 77.9 680 100-804 31-894 (903)
8 PRK10517 magnesium-transportin 100.0 3E-109 6E-114 1006.1 74.8 667 100-804 53-894 (902)
9 TIGR01524 ATPase-IIIB_Mg magne 100.0 8E-109 2E-113 1002.5 76.8 670 100-805 19-860 (867)
10 COG0474 MgtA Cation transport 100.0 1E-107 2E-112 995.2 68.2 671 103-795 32-902 (917)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-104 5E-109 971.2 73.5 655 147-805 1-916 (917)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 2.8E-97 6E-102 890.7 68.5 597 115-766 1-752 (755)
13 KOG0203 Na+/K+ ATPase, alpha s 100.0 3.5E-99 8E-104 845.9 30.1 709 100-813 43-1015(1019)
14 TIGR01657 P-ATPase-V P-type AT 100.0 5.3E-95 1.2E-99 899.3 65.0 636 113-785 137-1048(1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 5.7E-76 1.2E-80 731.4 57.9 659 130-810 1-1049(1057)
16 KOG0208 Cation transport ATPas 100.0 4.6E-76 1E-80 669.2 47.4 630 112-781 157-1095(1140)
17 PRK14010 potassium-transportin 100.0 4.3E-72 9.3E-77 652.7 46.5 417 148-628 27-587 (673)
18 PRK01122 potassium-transportin 100.0 2.8E-70 6.1E-75 638.0 52.5 407 148-619 28-581 (679)
19 PLN03190 aminophospholipid tra 100.0 9.5E-68 2.1E-72 651.9 63.9 553 128-702 85-1038(1178)
20 COG2217 ZntA Cation transport 100.0 3.1E-67 6.7E-72 612.1 47.3 449 140-627 131-682 (713)
21 KOG0205 Plasma membrane H+-tra 100.0 7.6E-68 1.6E-72 577.3 38.5 491 98-619 20-659 (942)
22 TIGR01497 kdpB K+-transporting 100.0 1.5E-66 3.4E-71 605.2 50.7 407 148-618 27-582 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 2.1E-62 4.6E-67 545.9 48.3 656 114-810 161-1153(1160)
24 KOG0207 Cation transport ATPas 100.0 5.1E-63 1.1E-67 563.9 39.9 487 139-662 290-906 (951)
25 PRK11033 zntA zinc/cadmium/mer 100.0 4.2E-60 9.1E-65 567.5 51.3 439 140-627 170-711 (741)
26 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.9E-58 1.3E-62 533.1 44.4 428 157-628 3-510 (536)
27 TIGR01511 ATPase-IB1_Cu copper 100.0 2E-57 4.4E-62 530.5 44.5 450 140-629 2-551 (562)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 2.4E-56 5.2E-61 522.7 45.1 423 158-629 4-532 (556)
29 PRK10671 copA copper exporting 100.0 6.7E-56 1.4E-60 541.1 50.3 449 140-625 234-793 (834)
30 KOG0210 P-type ATPase [Inorgan 100.0 6E-57 1.3E-61 494.1 34.5 664 126-816 75-1048(1051)
31 TIGR01494 ATPase_P-type ATPase 100.0 1.3E-54 2.8E-59 503.1 43.0 388 189-655 5-498 (499)
32 KOG0206 P-type ATPase [General 100.0 1.1E-56 2.5E-61 535.7 25.7 554 126-702 28-961 (1151)
33 COG2216 KdpB High-affinity K+ 100.0 6.7E-50 1.4E-54 428.9 31.9 402 150-605 29-570 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 99.9 4.8E-27 1E-31 245.5 19.3 169 186-355 2-174 (230)
35 PF00689 Cation_ATPase_C: Cati 99.9 1.3E-24 2.9E-29 218.7 15.9 171 633-804 1-182 (182)
36 KOG4383 Uncharacterized conser 99.9 2.2E-21 4.7E-26 213.5 27.6 300 367-668 698-1149(1354)
37 PF00702 Hydrolase: haloacid d 99.7 1.5E-17 3.3E-22 171.0 6.6 97 437-563 115-215 (215)
38 COG4087 Soluble P-type ATPase 99.6 1.9E-14 4E-19 130.2 10.5 126 438-596 19-146 (152)
39 PF00690 Cation_ATPase_N: Cati 99.3 8E-12 1.7E-16 104.9 6.8 66 99-166 4-69 (69)
40 smart00831 Cation_ATPase_N Cat 99.2 4.7E-11 1E-15 98.6 6.5 62 107-170 2-63 (64)
41 TIGR01487 SPP-like sucrose-pho 99.0 1.3E-09 2.9E-14 112.6 9.7 146 449-595 18-214 (215)
42 TIGR02137 HSK-PSP phosphoserin 99.0 2.6E-09 5.7E-14 109.3 11.4 130 449-599 68-198 (203)
43 PRK01158 phosphoglycolate phos 98.9 3.6E-09 7.8E-14 110.5 10.9 148 449-597 20-226 (230)
44 PRK10513 sugar phosphate phosp 98.9 5E-09 1.1E-13 112.3 11.7 66 531-597 196-265 (270)
45 PRK10976 putative hydrolase; P 98.9 8.5E-09 1.8E-13 110.2 12.0 66 531-597 190-261 (266)
46 PRK11133 serB phosphoserine ph 98.9 6.1E-09 1.3E-13 113.7 10.9 131 449-597 181-316 (322)
47 PRK15126 thiamin pyrimidine py 98.9 7.3E-09 1.6E-13 111.2 11.2 148 449-597 19-259 (272)
48 COG0561 Cof Predicted hydrolas 98.9 8.3E-09 1.8E-13 110.2 11.5 148 450-598 21-259 (264)
49 TIGR01482 SPP-subfamily Sucros 98.8 1.2E-08 2.7E-13 106.0 10.6 148 449-597 15-222 (225)
50 TIGR00338 serB phosphoserine p 98.8 1.2E-08 2.5E-13 105.8 10.2 129 449-595 85-218 (219)
51 PRK10530 pyridoxal phosphate ( 98.8 3.7E-08 8.1E-13 105.5 12.8 66 531-597 199-268 (272)
52 PF08282 Hydrolase_3: haloacid 98.8 1.1E-08 2.5E-13 107.2 8.5 147 449-596 15-254 (254)
53 TIGR02726 phenyl_P_delta pheny 98.8 3E-08 6.6E-13 98.1 9.5 100 456-588 41-142 (169)
54 PLN02887 hydrolase family prot 98.7 7.9E-08 1.7E-12 112.3 13.8 65 532-597 508-576 (580)
55 TIGR01670 YrbI-phosphatas 3-de 98.7 7.1E-08 1.5E-12 94.4 10.4 97 457-588 36-136 (154)
56 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 2.8E-07 6E-12 98.1 13.4 147 450-597 17-253 (256)
57 TIGR00099 Cof-subfamily Cof su 98.6 1.2E-07 2.7E-12 100.7 10.3 64 531-595 188-255 (256)
58 COG0560 SerB Phosphoserine pho 98.6 1.6E-07 3.5E-12 96.6 10.5 116 448-584 76-199 (212)
59 PRK09484 3-deoxy-D-manno-octul 98.5 2.2E-07 4.7E-12 93.7 8.8 111 455-600 54-172 (183)
60 PRK03669 mannosyl-3-phosphogly 98.5 7.7E-07 1.7E-11 95.5 13.1 147 450-597 25-265 (271)
61 PRK13582 thrH phosphoserine ph 98.5 6.5E-07 1.4E-11 91.6 11.8 127 449-597 68-196 (205)
62 PRK08238 hypothetical protein; 98.4 8.1E-05 1.8E-09 85.8 26.8 98 449-574 72-169 (479)
63 PRK00192 mannosyl-3-phosphogly 98.4 2.7E-06 5.9E-11 91.4 13.7 149 448-597 20-267 (273)
64 COG1778 Low specificity phosph 98.4 6.3E-07 1.4E-11 84.7 7.4 118 456-608 42-167 (170)
65 KOG1615 Phosphoserine phosphat 98.4 5.8E-07 1.2E-11 87.7 7.3 110 449-569 88-199 (227)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 8.7E-07 1.9E-11 90.2 9.1 117 449-581 80-200 (201)
67 TIGR02471 sucr_syn_bact_C sucr 98.3 3.3E-06 7.1E-11 88.7 9.6 66 531-597 159-232 (236)
68 TIGR03333 salvage_mtnX 2-hydro 98.3 5.3E-06 1.1E-10 85.8 10.9 137 448-597 69-209 (214)
69 PLN02954 phosphoserine phospha 98.2 1.2E-05 2.5E-10 83.6 11.6 128 449-595 84-222 (224)
70 PF12710 HAD: haloacid dehalog 98.1 4.4E-06 9.5E-11 84.3 5.9 92 452-560 92-192 (192)
71 TIGR01488 HAD-SF-IB Haloacid D 98.0 8E-06 1.7E-10 81.4 6.9 98 449-562 73-177 (177)
72 PRK13222 phosphoglycolate phos 98.0 3.8E-05 8.2E-10 79.7 12.0 128 448-598 92-223 (226)
73 PRK09552 mtnX 2-hydroxy-3-keto 98.0 1.7E-05 3.7E-10 82.3 9.3 135 449-597 74-213 (219)
74 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.9E-05 4E-10 80.7 8.6 106 447-569 85-197 (202)
75 TIGR02461 osmo_MPG_phos mannos 98.0 3.8E-05 8.3E-10 80.0 10.9 44 448-491 14-57 (225)
76 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.3E-05 5E-10 78.7 9.0 114 448-567 71-186 (188)
77 TIGR01485 SPP_plant-cyano sucr 98.0 3.1E-05 6.7E-10 82.0 10.3 149 448-597 20-244 (249)
78 COG0546 Gph Predicted phosphat 97.9 6.1E-05 1.3E-09 78.2 11.3 128 447-597 87-218 (220)
79 TIGR02463 MPGP_rel mannosyl-3- 97.9 8.9E-05 1.9E-09 76.9 11.1 38 452-489 19-56 (221)
80 cd01427 HAD_like Haloacid deha 97.9 4E-05 8.6E-10 71.8 7.5 117 445-566 20-137 (139)
81 TIGR01454 AHBA_synth_RP 3-amin 97.8 0.0001 2.2E-09 75.6 10.8 126 448-596 74-203 (205)
82 PRK14502 bifunctional mannosyl 97.6 0.00041 8.8E-09 81.6 11.8 41 450-490 434-474 (694)
83 PLN02382 probable sucrose-phos 97.6 0.00038 8.3E-09 79.1 11.3 143 454-597 33-257 (413)
84 PRK12702 mannosyl-3-phosphogly 97.6 0.00027 5.8E-09 75.2 9.1 43 449-491 18-60 (302)
85 PRK13288 pyrophosphatase PpaX; 97.5 0.00045 9.8E-09 71.2 10.5 125 449-596 82-210 (214)
86 PRK13223 phosphoglycolate phos 97.5 0.00045 9.8E-09 74.2 10.8 126 447-595 99-228 (272)
87 TIGR01449 PGP_bact 2-phosphogl 97.5 0.00047 1E-08 70.8 9.7 123 449-594 85-211 (213)
88 PRK10187 trehalose-6-phosphate 97.5 0.00081 1.7E-08 72.0 11.2 139 449-596 36-240 (266)
89 PRK13226 phosphoglycolate phos 97.3 0.0012 2.7E-08 68.9 10.6 127 449-598 95-226 (229)
90 PRK10826 2-deoxyglucose-6-phos 97.3 0.0009 2E-08 69.4 9.5 120 448-593 91-216 (222)
91 TIGR01544 HAD-SF-IE haloacid d 97.2 0.0036 7.9E-08 66.7 12.2 131 448-596 120-273 (277)
92 PTZ00174 phosphomannomutase; P 97.2 0.0014 3E-08 69.4 9.1 52 531-583 188-244 (247)
93 PF12515 CaATP_NAI: Ca2+-ATPas 97.2 8E-05 1.7E-09 56.0 -0.4 35 11-47 5-40 (47)
94 TIGR01545 YfhB_g-proteo haloac 97.1 0.0027 5.9E-08 65.4 9.8 107 449-570 94-202 (210)
95 TIGR03351 PhnX-like phosphonat 97.1 0.0032 7E-08 65.1 10.4 125 448-595 86-218 (220)
96 PRK13225 phosphoglycolate phos 97.0 0.0061 1.3E-07 65.4 11.8 122 449-596 142-267 (273)
97 PLN03243 haloacid dehalogenase 97.0 0.0055 1.2E-07 65.3 11.1 121 449-592 109-230 (260)
98 PRK11590 hypothetical protein; 96.9 0.004 8.7E-08 64.2 9.7 106 449-570 95-203 (211)
99 PLN02770 haloacid dehalogenase 96.9 0.0063 1.4E-07 64.4 11.2 116 449-585 108-226 (248)
100 TIGR01484 HAD-SF-IIB HAD-super 96.9 0.002 4.3E-08 65.8 6.9 39 449-487 17-55 (204)
101 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0033 7.2E-08 63.9 8.3 94 447-562 104-197 (197)
102 PRK13478 phosphonoacetaldehyde 96.8 0.0098 2.1E-07 63.6 12.0 124 449-597 101-255 (267)
103 TIGR01422 phosphonatase phosph 96.8 0.0077 1.7E-07 63.8 11.0 97 449-565 99-196 (253)
104 COG4030 Uncharacterized protei 96.7 0.026 5.7E-07 56.9 12.9 147 449-598 83-263 (315)
105 PRK11587 putative phosphatase; 96.7 0.011 2.4E-07 61.2 10.3 115 449-585 83-198 (218)
106 smart00775 LNS2 LNS2 domain. T 96.5 0.016 3.4E-07 56.9 9.8 102 447-565 25-141 (157)
107 PRK11009 aphA acid phosphatase 96.4 0.0072 1.6E-07 63.3 6.8 90 448-565 113-206 (237)
108 TIGR01672 AphA HAD superfamily 96.4 0.0068 1.5E-07 63.5 6.6 89 449-565 114-206 (237)
109 PRK06698 bifunctional 5'-methy 96.3 0.019 4.1E-07 66.5 10.7 123 449-597 330-454 (459)
110 PF05116 S6PP: Sucrose-6F-phos 96.3 0.011 2.4E-07 62.5 8.0 45 530-575 164-212 (247)
111 COG3769 Predicted hydrolase (H 96.3 0.042 9.1E-07 55.4 11.0 37 453-489 27-63 (274)
112 COG4359 Uncharacterized conser 96.3 0.011 2.5E-07 57.7 6.8 105 449-568 73-184 (220)
113 PRK08942 D,D-heptose 1,7-bisph 96.2 0.032 7E-07 55.9 10.4 128 449-597 29-177 (181)
114 PF06888 Put_Phosphatase: Puta 96.2 0.012 2.7E-07 61.2 7.5 108 449-566 71-195 (234)
115 TIGR01428 HAD_type_II 2-haloal 96.2 0.018 3.8E-07 58.5 8.6 96 449-565 92-187 (198)
116 PLN02575 haloacid dehalogenase 96.1 0.038 8.2E-07 61.7 11.3 121 449-592 216-337 (381)
117 PRK14501 putative bifunctional 96.1 0.022 4.9E-07 69.8 10.2 61 530-597 656-721 (726)
118 TIGR01990 bPGM beta-phosphoglu 96.0 0.012 2.6E-07 58.9 6.2 94 449-565 87-180 (185)
119 TIGR02253 CTE7 HAD superfamily 96.0 0.019 4.2E-07 59.2 7.9 96 449-565 94-190 (221)
120 TIGR01509 HAD-SF-IA-v3 haloaci 96.0 0.026 5.6E-07 56.1 8.4 94 449-564 85-178 (183)
121 TIGR01662 HAD-SF-IIIA HAD-supe 95.9 0.037 7.9E-07 52.3 8.4 92 449-565 25-126 (132)
122 TIGR02254 YjjG/YfnB HAD superf 95.8 0.038 8.1E-07 57.0 8.7 122 449-594 97-222 (224)
123 PHA02530 pseT polynucleotide k 95.7 0.028 6E-07 61.2 8.0 108 445-566 183-292 (300)
124 PRK14988 GMP/IMP nucleotidase; 95.7 0.031 6.8E-07 58.2 7.9 98 448-566 92-189 (224)
125 TIGR02009 PGMB-YQAB-SF beta-ph 95.6 0.023 4.9E-07 56.8 6.3 95 448-565 87-181 (185)
126 PRK06769 hypothetical protein; 95.6 0.03 6.4E-07 55.9 6.8 97 450-567 29-134 (173)
127 PF13419 HAD_2: Haloacid dehal 95.5 0.02 4.3E-07 56.0 5.3 98 447-565 75-172 (176)
128 TIGR01685 MDP-1 magnesium-depe 95.4 0.066 1.4E-06 53.4 8.7 107 440-568 36-155 (174)
129 PRK09449 dUMP phosphatase; Pro 95.4 0.072 1.6E-06 55.1 9.5 124 449-596 95-222 (224)
130 PLN02940 riboflavin kinase 95.4 0.052 1.1E-06 61.2 9.0 116 449-585 93-211 (382)
131 PLN02779 haloacid dehalogenase 95.2 0.082 1.8E-06 57.2 9.2 118 449-585 144-263 (286)
132 TIGR01533 lipo_e_P4 5'-nucleot 94.7 0.13 2.8E-06 54.8 8.9 86 447-559 116-204 (266)
133 TIGR01668 YqeG_hyp_ppase HAD s 94.7 0.089 1.9E-06 52.3 7.3 87 449-565 43-131 (170)
134 TIGR00213 GmhB_yaeD D,D-heptos 94.5 0.15 3.2E-06 51.0 8.2 27 450-476 27-53 (176)
135 TIGR01656 Histidinol-ppas hist 94.4 0.12 2.5E-06 50.0 7.1 94 449-565 27-140 (147)
136 TIGR02252 DREG-2 REG-2-like, H 94.3 0.12 2.6E-06 52.5 7.4 94 449-564 105-199 (203)
137 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.2 0.41 8.8E-06 50.4 11.2 49 442-490 17-67 (242)
138 TIGR01549 HAD-SF-IA-v1 haloaci 94.1 0.14 3.1E-06 49.5 7.2 93 447-563 62-154 (154)
139 PLN02811 hydrolase 93.8 0.18 4E-06 52.1 7.6 98 448-566 77-180 (220)
140 TIGR01675 plant-AP plant acid 93.4 0.32 7E-06 50.5 8.4 88 447-556 118-209 (229)
141 TIGR01261 hisB_Nterm histidino 93.4 0.15 3.1E-06 50.3 5.7 95 449-567 29-144 (161)
142 PRK05446 imidazole glycerol-ph 93.3 0.16 3.5E-06 56.4 6.5 98 448-567 29-145 (354)
143 smart00577 CPDc catalytic doma 93.2 0.11 2.3E-06 50.4 4.4 94 447-567 43-139 (148)
144 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.4 1.5 3.3E-05 46.6 12.3 49 442-490 10-65 (257)
145 COG2179 Predicted hydrolase of 92.3 0.44 9.5E-06 46.5 7.1 82 449-563 46-131 (175)
146 TIGR01681 HAD-SF-IIIC HAD-supe 92.3 0.31 6.6E-06 46.0 6.1 39 449-487 29-68 (128)
147 KOG3120 Predicted haloacid deh 92.3 0.17 3.8E-06 51.2 4.5 113 449-575 84-215 (256)
148 PF09419 PGP_phosphatase: Mito 92.2 0.48 1E-05 46.8 7.4 81 447-558 57-152 (168)
149 PLN02919 haloacid dehalogenase 92.2 0.63 1.4E-05 59.4 10.4 127 449-597 161-292 (1057)
150 TIGR01691 enolase-ppase 2,3-di 92.1 0.32 6.9E-06 50.5 6.5 100 446-568 92-194 (220)
151 TIGR00685 T6PP trehalose-phosp 92.1 0.18 3.9E-06 53.2 4.6 68 525-597 161-240 (244)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 91.7 0.59 1.3E-05 46.3 7.6 40 450-489 43-94 (166)
153 COG0272 Lig NAD-dependent DNA 91.6 2.3 4.9E-05 50.4 13.2 52 435-489 595-655 (667)
154 PRK10563 6-phosphogluconate ph 91.4 0.26 5.5E-06 50.9 4.9 98 448-568 87-184 (221)
155 TIGR02247 HAD-1A3-hyp Epoxide 91.3 0.25 5.4E-06 50.6 4.7 97 448-565 93-191 (211)
156 TIGR01686 FkbH FkbH-like domai 90.2 0.47 1E-05 52.2 5.8 91 449-569 31-129 (320)
157 PLN03017 trehalose-phosphatase 89.8 2.3 4.9E-05 47.4 10.6 34 449-483 133-166 (366)
158 PRK09456 ?-D-glucose-1-phospha 89.6 0.71 1.5E-05 46.9 6.2 97 449-566 84-181 (199)
159 PF08235 LNS2: LNS2 (Lipin/Ned 89.5 1.9 4.2E-05 42.1 8.7 103 447-565 25-141 (157)
160 KOG3040 Predicted sugar phosph 89.5 2.3 4.9E-05 43.0 9.2 53 439-491 13-68 (262)
161 PRK10444 UMP phosphatase; Prov 89.4 2 4.4E-05 45.5 9.6 48 442-489 10-60 (248)
162 PLN02205 alpha,alpha-trehalose 89.1 1.3 2.9E-05 55.0 9.1 51 436-486 603-654 (854)
163 TIGR01457 HAD-SF-IIA-hyp2 HAD- 88.4 3.6 7.9E-05 43.5 10.8 48 444-491 12-62 (249)
164 PLN02645 phosphoglycolate phos 88.2 0.63 1.4E-05 51.0 5.0 49 442-490 37-88 (311)
165 PLN02580 trehalose-phosphatase 87.8 0.79 1.7E-05 51.4 5.4 63 530-597 300-374 (384)
166 PRK10725 fructose-1-P/6-phosph 87.7 1.4 3.1E-05 43.9 6.9 93 450-565 89-181 (188)
167 PF13246 Hydrolase_like2: Puta 86.8 0.46 9.9E-06 42.0 2.3 20 360-379 72-91 (91)
168 PHA02597 30.2 hypothetical pro 86.3 1.9 4.1E-05 43.5 7.0 93 449-566 74-170 (197)
169 TIGR01993 Pyr-5-nucltdase pyri 86.3 1.8 3.9E-05 43.2 6.6 97 449-565 84-180 (184)
170 PRK11033 zntA zinc/cadmium/mer 82.4 1.4E+02 0.003 37.1 21.8 60 237-297 249-313 (741)
171 PLN02177 glycerol-3-phosphate 82.1 18 0.00038 42.4 13.2 121 450-592 111-240 (497)
172 COG0637 Predicted phosphatase/ 81.5 3.7 7.9E-05 42.6 6.7 100 447-567 84-183 (221)
173 TIGR01684 viral_ppase viral ph 79.4 3.7 7.9E-05 44.2 5.9 42 450-491 146-188 (301)
174 TIGR01452 PGP_euk phosphoglyco 79.3 17 0.00038 39.0 11.3 46 445-490 14-62 (279)
175 PF03767 Acid_phosphat_B: HAD 79.3 2 4.4E-05 44.8 3.9 90 448-558 114-207 (229)
176 TIGR01680 Veg_Stor_Prot vegeta 78.7 8.2 0.00018 41.2 8.2 87 447-556 143-235 (275)
177 TIGR01689 EcbF-BcbF capsule bi 78.6 5.6 0.00012 37.4 6.3 32 448-479 23-54 (126)
178 PF13344 Hydrolase_6: Haloacid 77.0 1 2.3E-05 40.6 0.8 46 445-490 10-58 (101)
179 COG0647 NagD Predicted sugar p 75.1 10 0.00023 40.5 7.9 44 442-485 17-60 (269)
180 COG0241 HisB Histidinol phosph 73.5 8.4 0.00018 38.6 6.3 97 450-565 32-144 (181)
181 PHA03398 viral phosphatase sup 71.8 6.3 0.00014 42.5 5.2 42 450-491 148-190 (303)
182 PRK10748 flavin mononucleotide 71.3 8.1 0.00017 40.4 6.0 92 449-569 113-207 (238)
183 PLN02151 trehalose-phosphatase 69.1 50 0.0011 36.8 11.6 62 531-597 269-342 (354)
184 PRK14194 bifunctional 5,10-met 68.4 36 0.00078 37.0 10.2 64 523-586 137-209 (301)
185 TIGR01493 HAD-SF-IA-v2 Haloaci 68.1 6.5 0.00014 38.6 4.2 85 449-561 90-174 (175)
186 COG3700 AphA Acid phosphatase 67.9 10 0.00022 37.5 5.2 90 450-568 115-210 (237)
187 PF06570 DUF1129: Protein of u 67.1 1.1E+02 0.0025 31.2 13.2 15 786-800 182-196 (206)
188 TIGR02251 HIF-SF_euk Dullard-l 66.1 3.7 8.1E-05 40.4 2.0 45 445-490 38-82 (162)
189 TIGR01663 PNK-3'Pase polynucle 63.0 31 0.00067 40.6 9.1 40 450-489 198-249 (526)
190 COG1011 Predicted hydrolase (H 62.8 60 0.0013 33.1 10.5 44 447-491 97-140 (229)
191 PRK14179 bifunctional 5,10-met 61.4 63 0.0014 34.9 10.3 62 524-585 137-207 (284)
192 PF05822 UMPH-1: Pyrimidine 5' 60.1 26 0.00056 36.9 6.9 134 448-596 89-241 (246)
193 PF00389 2-Hacid_dh: D-isomer 59.8 1.4E+02 0.0029 27.9 11.4 68 534-610 53-123 (133)
194 PRK14169 bifunctional 5,10-met 59.6 81 0.0017 34.0 10.7 62 524-585 135-205 (282)
195 PRK14170 bifunctional 5,10-met 59.5 73 0.0016 34.4 10.4 63 524-586 136-207 (284)
196 PLN02423 phosphomannomutase 58.9 14 0.00029 39.1 4.8 39 530-569 188-231 (245)
197 PRK14182 bifunctional 5,10-met 55.5 80 0.0017 34.1 9.9 62 524-585 136-206 (282)
198 PF02358 Trehalose_PPase: Treh 54.4 30 0.00065 36.0 6.5 61 526-586 160-233 (235)
199 COG1877 OtsB Trehalose-6-phosp 53.8 55 0.0012 35.0 8.3 42 446-487 37-79 (266)
200 PRK14189 bifunctional 5,10-met 52.3 94 0.002 33.6 9.8 64 523-586 136-208 (285)
201 PRK14188 bifunctional 5,10-met 52.1 56 0.0012 35.5 8.2 63 523-585 136-207 (296)
202 PRK14172 bifunctional 5,10-met 51.4 1.1E+02 0.0025 32.8 10.2 63 524-586 137-208 (278)
203 PF13380 CoA_binding_2: CoA bi 50.9 17 0.00037 33.5 3.5 84 400-489 19-104 (116)
204 PRK14166 bifunctional 5,10-met 49.9 1.2E+02 0.0025 32.8 10.0 63 524-586 136-207 (282)
205 PRK14167 bifunctional 5,10-met 49.8 1.3E+02 0.0027 32.9 10.3 62 524-585 136-210 (297)
206 PRK14190 bifunctional 5,10-met 49.6 1.2E+02 0.0027 32.7 10.2 63 523-585 136-207 (284)
207 TIGR02244 HAD-IG-Ncltidse HAD 48.3 53 0.0011 36.5 7.4 102 451-560 186-312 (343)
208 PRK14191 bifunctional 5,10-met 47.5 1.3E+02 0.0029 32.5 10.0 64 523-586 135-207 (285)
209 TIGR01501 MthylAspMutase methy 47.5 99 0.0021 29.5 8.1 82 403-490 24-113 (134)
210 PF12689 Acid_PPase: Acid Phos 47.0 67 0.0014 31.9 7.2 41 449-489 45-86 (169)
211 cd02071 MM_CoA_mut_B12_BD meth 46.9 64 0.0014 29.9 6.8 82 403-490 22-105 (122)
212 COG0078 ArgF Ornithine carbamo 45.8 1.2E+02 0.0026 32.9 9.2 74 466-568 100-180 (310)
213 PRK14174 bifunctional 5,10-met 45.6 75 0.0016 34.5 7.9 61 524-585 138-212 (295)
214 PF03120 DNA_ligase_OB: NAD-de 44.4 14 0.0003 32.0 1.7 20 233-252 47-67 (82)
215 PF06506 PrpR_N: Propionate ca 42.0 52 0.0011 32.7 5.7 67 523-608 105-172 (176)
216 TIGR00612 ispG_gcpE 1-hydroxy- 41.9 70 0.0015 35.1 6.8 154 391-569 147-315 (346)
217 PRK14186 bifunctional 5,10-met 40.7 1.2E+02 0.0026 33.0 8.4 62 524-585 137-207 (297)
218 PF02401 LYTB: LytB protein; 39.1 1E+02 0.0022 33.3 7.6 148 393-574 96-267 (281)
219 TIGR00640 acid_CoA_mut_C methy 38.4 1E+02 0.0023 29.1 6.8 83 402-490 24-108 (132)
220 PRK14185 bifunctional 5,10-met 38.3 2.5E+02 0.0053 30.6 10.3 62 524-585 136-210 (293)
221 PRK14184 bifunctional 5,10-met 37.9 1.2E+02 0.0027 32.7 8.0 62 523-585 135-210 (286)
222 PRK14193 bifunctional 5,10-met 37.6 2.6E+02 0.0056 30.3 10.3 62 524-585 137-209 (284)
223 TIGR01456 CECR5 HAD-superfamil 37.4 1.3E+02 0.0028 33.0 8.4 49 442-490 9-65 (321)
224 PF15584 Imm44: Immunity prote 37.0 16 0.00036 31.9 1.0 19 238-256 13-31 (94)
225 PLN02897 tetrahydrofolate dehy 36.7 1.5E+02 0.0032 32.9 8.5 62 524-585 193-263 (345)
226 PRK14183 bifunctional 5,10-met 36.0 3.1E+02 0.0066 29.7 10.5 63 524-586 136-207 (281)
227 PRK14176 bifunctional 5,10-met 35.9 2E+02 0.0044 31.1 9.2 62 524-585 143-213 (287)
228 PRK14175 bifunctional 5,10-met 35.7 1.1E+02 0.0025 33.0 7.3 30 524-553 137-168 (286)
229 TIGR00381 cdhD CO dehydrogenas 35.1 2.3E+02 0.005 31.9 9.6 76 523-608 219-296 (389)
230 CHL00200 trpA tryptophan synth 34.9 4.2E+02 0.0091 28.3 11.5 29 529-557 187-215 (263)
231 PF04551 GcpE: GcpE protein; 34.2 1.3E+02 0.0028 33.5 7.4 152 395-572 160-327 (359)
232 TIGR02250 FCP1_euk FCP1-like p 33.7 64 0.0014 31.5 4.7 43 447-490 56-98 (156)
233 TIGR00676 fadh2 5,10-methylene 33.4 1.3E+02 0.0028 32.2 7.5 84 394-477 14-99 (272)
234 PRK15424 propionate catabolism 32.1 4.3E+02 0.0094 31.4 12.0 102 453-604 95-197 (538)
235 PF01455 HupF_HypC: HupF/HypC 31.2 1.1E+02 0.0024 25.5 4.9 32 218-249 17-51 (68)
236 COG3329 Predicted permease [Ge 31.1 2.2E+02 0.0048 30.9 8.2 49 122-170 186-234 (372)
237 PRK14187 bifunctional 5,10-met 30.6 4E+02 0.0088 28.9 10.5 63 523-585 138-209 (294)
238 PF13242 Hydrolase_like: HAD-h 30.5 84 0.0018 26.2 4.3 57 529-585 7-70 (75)
239 cd00860 ThrRS_anticodon ThrRS 30.3 1.1E+02 0.0023 26.1 5.2 47 443-489 6-53 (91)
240 PF02219 MTHFR: Methylenetetra 30.3 1.1E+02 0.0024 33.0 6.3 44 435-478 68-112 (287)
241 PRK14171 bifunctional 5,10-met 29.8 3.6E+02 0.0078 29.2 9.9 63 523-585 137-208 (288)
242 PLN02591 tryptophan synthase 29.7 2.7E+02 0.0058 29.6 8.8 33 529-561 174-209 (250)
243 PRK14180 bifunctional 5,10-met 29.5 2.1E+02 0.0045 31.0 8.0 62 524-585 137-207 (282)
244 PRK02261 methylaspartate mutas 29.2 2.1E+02 0.0045 27.3 7.2 82 402-489 25-114 (137)
245 PLN02616 tetrahydrofolate dehy 28.9 2E+02 0.0044 32.1 8.0 62 524-585 210-280 (364)
246 PRK14168 bifunctional 5,10-met 28.8 4.3E+02 0.0093 28.8 10.3 62 524-585 140-214 (297)
247 COG2503 Predicted secreted aci 28.4 2.2E+02 0.0048 29.9 7.5 82 449-559 122-209 (274)
248 PRK01045 ispH 4-hydroxy-3-meth 28.2 5.7E+02 0.012 27.9 11.2 174 360-573 68-267 (298)
249 TIGR01459 HAD-SF-IIA-hyp4 HAD- 27.4 51 0.0011 34.4 3.0 95 451-565 140-236 (242)
250 TIGR00216 ispH_lytB (E)-4-hydr 26.5 8.4E+02 0.018 26.3 12.0 171 360-569 68-262 (280)
251 KOG1250 Threonine/serine dehyd 26.3 1.9E+02 0.004 32.7 7.0 71 453-556 100-173 (457)
252 cd05017 SIS_PGI_PMI_1 The memb 26.1 1E+02 0.0022 28.3 4.4 37 450-488 55-91 (119)
253 PTZ00445 p36-lilke protein; Pr 26.1 98 0.0021 31.9 4.5 75 394-477 28-103 (219)
254 COG0190 FolD 5,10-methylene-te 25.9 5.7E+02 0.012 27.6 10.4 62 524-585 135-205 (283)
255 TIGR01460 HAD-SF-IIA Haloacid 25.6 1.1E+02 0.0024 31.8 5.2 43 447-489 12-58 (236)
256 TIGR01657 P-ATPase-V P-type AT 25.2 1.2E+03 0.027 30.1 15.4 36 237-272 235-273 (1054)
257 cd02067 B12-binding B12 bindin 25.0 1.4E+02 0.0031 27.1 5.2 82 402-489 21-104 (119)
258 PRK01906 tetraacyldisaccharide 24.7 1.7E+02 0.0036 32.6 6.5 59 533-591 76-161 (338)
259 PRK11507 ribosome-associated p 24.5 79 0.0017 26.5 2.9 26 221-246 38-63 (70)
260 TIGR00559 pdxJ pyridoxine 5'-p 24.3 2.8E+02 0.0061 29.1 7.5 38 451-489 109-146 (237)
261 PRK00652 lpxK tetraacyldisacch 24.0 1.9E+02 0.0042 31.8 6.8 58 534-591 70-154 (325)
262 COG1832 Predicted CoA-binding 23.2 1.3E+02 0.0027 28.8 4.3 38 435-472 13-50 (140)
263 TIGR00640 acid_CoA_mut_C methy 23.1 6.1E+02 0.013 23.9 9.2 106 439-574 5-115 (132)
264 cd02072 Glm_B12_BD B12 binding 22.9 3.7E+02 0.008 25.4 7.5 82 403-490 22-111 (128)
265 PRK07956 ligA NAD-dependent DN 22.8 1.1E+02 0.0023 37.4 4.9 26 233-258 365-392 (665)
266 PRK09432 metF 5,10-methylenete 22.5 2.2E+02 0.0047 31.0 6.7 85 393-477 37-123 (296)
267 PF02606 LpxK: Tetraacyldisacc 22.4 1.8E+02 0.0038 32.2 6.1 60 533-592 55-141 (326)
268 PF11694 DUF3290: Protein of u 22.3 6.8E+02 0.015 24.3 9.4 66 176-245 42-115 (149)
269 COG0309 HypE Hydrogenase matur 22.2 1.9E+02 0.0041 31.9 6.1 84 443-551 219-307 (339)
270 TIGR02329 propionate_PrpR prop 22.2 7.1E+02 0.015 29.5 11.4 103 453-606 85-189 (526)
271 TIGR00682 lpxK tetraacyldisacc 22.1 2.1E+02 0.0046 31.4 6.6 58 534-591 49-133 (311)
272 COG1188 Ribosome-associated he 22.1 1.1E+02 0.0023 27.6 3.4 29 221-250 35-63 (100)
273 PRK14177 bifunctional 5,10-met 21.5 1E+03 0.022 25.8 11.4 63 523-585 137-208 (284)
274 cd04906 ACT_ThrD-I_1 First of 20.8 1.3E+02 0.0029 25.8 3.9 34 442-475 42-76 (85)
275 cd00859 HisRS_anticodon HisRS 20.7 1.7E+02 0.0037 24.4 4.6 47 443-489 6-53 (91)
276 TIGR00262 trpA tryptophan synt 20.6 5E+02 0.011 27.5 8.9 42 445-486 120-163 (256)
277 PF06609 TRI12: Fungal trichot 20.6 1.5E+03 0.033 27.2 14.4 20 740-759 298-319 (599)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-182 Score=1515.87 Aligned_cols=786 Identities=51% Similarity=0.825 Sum_probs=733.9
Q ss_pred CCCcccchhhhhhhhhcchhhhhhHHHHH---------------hhhhcccccccCCC-cceeeccCCCCCCccCHhHHH
Q 003452 21 TLNVPTKKWHSAFTKIYCSRTLLSLAEIA---------------KAKKGVNKASRSPS-YTVVNLQHDDESFKIDQTSLV 84 (819)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 84 (819)
++.++++|||.|..+++++||++...... ...++++.++.+.. +++| .-++++|+|.
T Consensus 14 ~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~-------~~~i~~e~l~ 86 (1034)
T KOG0204|consen 14 SSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEY-------TLGIGAEELV 86 (1034)
T ss_pred chhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhcccccccc-------ccccCHHHHH
Confidence 44899999999999999999875332210 01122222222211 2111 2378999999
Q ss_pred HhcccCChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHH
Q 003452 85 ELVKMKDLDKLHEFGGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAV 164 (819)
Q Consensus 85 ~~~~~~~~~~l~~~ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~ 164 (819)
++++.+|.+.|+++||++|||++|+||+..||++++++..+||+.||+|++|++++|+||+++|++++|.++++|++||+
T Consensus 87 ~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAv 166 (1034)
T KOG0204|consen 87 KIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAV 166 (1034)
T ss_pred HHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEE
Q 003452 165 LSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICL 244 (819)
Q Consensus 165 ~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l 244 (819)
+|+++|++++|.+++||||++|+++++++++++|++||+|++||++|++++++.+++|+|||++++|++.|||||||+.|
T Consensus 167 vSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~l 246 (1034)
T KOG0204|consen 167 VSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQL 246 (1034)
T ss_pred HHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEe
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred ecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCC
Q 003452 245 KIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQ 324 (819)
Q Consensus 245 ~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 324 (819)
+.||+|||||++++|++|.+|||+|||||++++|....+|+|+|||++++|+++|+||+||+||+||++|.++.++.+++
T Consensus 247 k~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~ 326 (1034)
T KOG0204|consen 247 KIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEE 326 (1034)
T ss_pred ecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999999899
Q ss_pred ChhHHHHHHHHhhHhHHHHHHHHHHHHHHh--------------------------------------------------
Q 003452 325 TPLQARLNKLTSSTGKIGLAVAFLVLAVLL-------------------------------------------------- 354 (819)
Q Consensus 325 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~-------------------------------------------------- 354 (819)
||||.+|+++|..++++|+.+|++++++++
T Consensus 327 tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVT 406 (1034)
T KOG0204|consen 327 TPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVT 406 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHH
Confidence 999999999999999999999999998876
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 407 LsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~ 486 (1034)
T KOG0204|consen 407 LSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIA 486 (1034)
T ss_pred HHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHh
Confidence
Q ss_pred -----------------------------------------------------------------ccCCCceEEEecchH
Q 003452 355 -----------------------------------------------------------------KKTDNTSHVHWKGAA 369 (819)
Q Consensus 355 -----------------------------------------------------------------~~~~~~~~~~~KGa~ 369 (819)
+.++++.++|||||+
T Consensus 487 ~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAs 566 (1034)
T KOG0204|consen 487 QNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGAS 566 (1034)
T ss_pred hcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChH
Confidence 234444239999999
Q ss_pred HHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhhhhhcccCcEEEEEEEeeC
Q 003452 370 EMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQKKLIEDNLTLLGLVGIKD 448 (819)
Q Consensus 370 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~v~i~D 448 (819)
|++|++|+.++|++|+..+++++.+..+++.|+.||++||||+|+|||++...... ....+++.++.+++++|++|++|
T Consensus 567 EiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkD 646 (1034)
T KOG0204|consen 567 EIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKD 646 (1034)
T ss_pred HHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccC
Confidence 99999999999999999999999999999999999999999999999997554111 11223457889999999999999
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
|+|||++++|+.|++|||+|+|+||||..||++||.+|||..++. +.++++|++|++++++|+++++++++|+||++
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSS 723 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQEERDKIWPKLRVLARSS 723 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHHHHHhhhhhheeeecCC
Confidence 999999999999999999999999999999999999999999754 36899999999999999999999999999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQK 608 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k 608 (819)
|.||+.+|+.|+++||+||+||||+||+||||+||||+|||++|||+|||+|||||+||||++|+++++|||++|.||+|
T Consensus 724 P~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqK 803 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQK 803 (1034)
T ss_pred CchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHH
Q 003452 609 LIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVA 688 (819)
Q Consensus 609 ~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~ 688 (819)
|+||||++|+++++++|++++..+.+||+++||||+|||||+++|||||||||+++||+|+|++|++|||++.||+||++
T Consensus 804 FiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~ 883 (1034)
T KOG0204|consen 804 FLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILG 883 (1034)
T ss_pred hheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCc------chhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHH
Q 003452 689 QALYQRAVLLTLQFRGESIFGVN------KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVL 762 (819)
Q Consensus 689 ~~~~~~~v~~~l~~~~~~~~~~~------~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~ 762 (819)
|++||++++++++|.|..+|+.. +..++|++||+||+||+||+||+|++++.|+|+++++|++|+.++.+++++
T Consensus 884 qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~ 963 (1034)
T KOG0204|consen 884 QAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVS 963 (1034)
T ss_pred HHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeeh
Confidence 99999999999999999998652 557899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhccCCCCcccchhc
Q 003452 763 QVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816 (819)
Q Consensus 763 ~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~~~~~~~ 816 (819)
|+++++|++.+|+++||+|.+|++|+.+|+++|+++.++|++|++..|+..+.+
T Consensus 964 QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~ 1017 (1034)
T KOG0204|consen 964 QVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAG 1017 (1034)
T ss_pred hhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeec
Confidence 999999999999999999999999999999999999999999999988877765
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-128 Score=1086.14 Aligned_cols=695 Identities=31% Similarity=0.511 Sum_probs=625.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.+++.+..|+||+++||+++| +.+|++.||.|+++....+|+|+.+++||.|++..+|+++|++|++++ .
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~ 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------D 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------h
Confidence 588899999999999999988 999999999999999999999999999999999999999999999998 5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEec
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDG 259 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g 259 (819)
|.|+++|.+++++++.+..+++|+.++++++|.++.+ ..++|+|+|+.+.++++||||||+|.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p-~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVP-PMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCC-ccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 7789999999999999999999999999999999865 479999999999999999999999999999999999999999
Q ss_pred cceeEecccccCCCceeeecCC------------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChh
Q 003452 260 HSLQVDESSMTGESDHVEVNSS------------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPL 327 (819)
Q Consensus 260 ~~l~VDES~LTGES~pv~k~~~------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 327 (819)
.+|.+|||+|||||.||.|..+ +.|++|+||.|..|.++++|+.||.+|++|++.+++.+.++++|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999632 4678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------------------------
Q 003452 328 QARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------------------------- 354 (819)
Q Consensus 328 q~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------------------------- 354 (819)
|+++|.+++++..+..++++.++++-.
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakk 316 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKK 316 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhh
Confidence 999999999998665555555544311
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 317 naIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l 396 (972)
T KOG0202|consen 317 NAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLL 396 (972)
T ss_pred hhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 397 ~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 397 QELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccc
Confidence
Q ss_pred ------ccCCC--ceEEEecchHHHHHHhhhhcccccC-CcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc
Q 003452 355 ------KKTDN--TSHVHWKGAAEMILAMCSSYYDASG-NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425 (819)
Q Consensus 355 ------~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~ 425 (819)
..+.+ +..+|.|||+|.++++|++++..+| +.+||++..|+.+.+...+|+++|||||++|+++.+.....
T Consensus 477 ~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~ 556 (972)
T KOG0202|consen 477 SMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPD 556 (972)
T ss_pred eEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChh
Confidence 11122 3678999999999999988887776 66999999999999999999999999999999987641111
Q ss_pred ----chhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccee
Q 003452 426 ----NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVL 501 (819)
Q Consensus 426 ----~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi 501 (819)
....++...|+||+|+|++|+.||||++++++|+.|+++||+|+|+||||..||.+||+++||...+.+ -...++
T Consensus 557 ~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~~~~ 635 (972)
T KOG0202|consen 557 DQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSSMAL 635 (972)
T ss_pred hhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-cccccc
Confidence 111224557899999999999999999999999999999999999999999999999999999887655 456899
Q ss_pred cccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC
Q 003452 502 EGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD 581 (819)
Q Consensus 502 ~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD 581 (819)
+|++|+++++++..+...+..+|+|++|.+|.++|+.||++|++|||||||+||+||||.||||||||++|||+||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCC
Q 003452 582 IVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKP 661 (819)
Q Consensus 582 ivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p 661 (819)
+||.||||++|+.++++||.+|+||++|+.|+++.|+.++...++++.+..+.||+|+|+||+|++||.+||.+|+.|||
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH---HHHhh-ccccCC---------------------cchhhh
Q 003452 662 TKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLT---LQFRG-ESIFGV---------------------NKKVKE 716 (819)
Q Consensus 662 ~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~---l~~~~-~~~~~~---------------------~~~~~~ 716 (819)
+.++|++||+++++++++...+.+++..++|..+..+. ..+.+ ..-... +.....
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~ 875 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPL 875 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccc
Confidence 99999999999999999999999998888876543322 22221 000000 022345
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHHHhHccccccCChhhHHHHHHHHHHH
Q 003452 717 TLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEFLKNFADTERLNWGQWSACIGFAAAS 794 (819)
Q Consensus 717 T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~ 794 (819)
|+.|.+||+..+||.+|||+-+..-+..++|.|+||.+++.+++++|+++ +++++..|+++||++.+|++.+.+++..
T Consensus 876 tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V 955 (972)
T KOG0202|consen 876 TMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPV 955 (972)
T ss_pred eEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhh
Confidence 89999999999999999999655545559999999999999999998765 5789999999999999999999999999
Q ss_pred HHHHHHHhhccC
Q 003452 795 WPIGWLVKCIPV 806 (819)
Q Consensus 795 ~~~~~~~k~i~~ 806 (819)
+++++++|++.+
T Consensus 956 ~i~dEilK~~~R 967 (972)
T KOG0202|consen 956 IIVDEILKFIAR 967 (972)
T ss_pred hhHHHHHHHHHH
Confidence 999999999874
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9.1e-123 Score=1137.23 Aligned_cols=722 Identities=47% Similarity=0.768 Sum_probs=655.3
Q ss_pred CCCccCHhHHHHhccc-CChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHh
Q 003452 74 ESFKIDQTSLVELVKM-KDLDKLHEFGGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALK 152 (819)
Q Consensus 74 ~~~~~~~~~l~~~~~~-~~~~~l~~~ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~ 152 (819)
++|++..+++.++.+. ++.+.|+++||++++++.|++|.++||+++++++++|+++||+|++++++++++|++++++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~ 95 (941)
T TIGR01517 16 DGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALS 95 (941)
T ss_pred CCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHh
Confidence 4799999999998866 467889999999999999999999999943344999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhc-----ccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCE
Q 003452 153 DLTILILLGCAVLSLAFGIK-----EHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGR 227 (819)
Q Consensus 153 ~~~~~il~v~a~~s~~~g~~-----~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~ 227 (819)
++++++|++++++|+++|+. +.+..++|+|+++|+++++++..++++++|++++++++|++...+.+++|+|||+
T Consensus 96 ~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~ 175 (941)
T TIGR01517 96 DQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQ 175 (941)
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCE
Confidence 99999999999999998853 2344568999999999999999999999999999999998765566899999999
Q ss_pred EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCc
Q 003452 228 RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMN 307 (819)
Q Consensus 228 ~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~ 307 (819)
+++|+++||||||+|.|++||+|||||++++|+.+.||||+|||||.|+.|.+++.+++|+||.|.+|.++++|++||.+
T Consensus 176 ~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~ 255 (941)
T TIGR01517 176 EQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVN 255 (941)
T ss_pred EEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCC
Confidence 99999999999999999999999999999999777999999999999999997677889999999999999999999999
Q ss_pred ChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHH-----------------------h----------
Q 003452 308 TTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVL-----------------------L---------- 354 (819)
Q Consensus 308 T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~-----------------------~---------- 354 (819)
|++|||++++.+++ +++|+|++++++++++.++++++++++|+++ .
T Consensus 256 T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ll 334 (941)
T TIGR01517 256 SFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIV 334 (941)
T ss_pred cHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHH
Confidence 99999999997754 6789999999999999887766554433211 0
Q ss_pred ------------------------------------------------------------------c-------------
Q 003452 355 ------------------------------------------------------------------K------------- 355 (819)
Q Consensus 355 ------------------------------------------------------------------~------------- 355 (819)
.
T Consensus 335 v~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 414 (941)
T TIGR01517 335 VVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVP 414 (941)
T ss_pred HhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCC
Confidence 0
Q ss_pred -------------------c---------------------------------------------------------CCC
Q 003452 356 -------------------K---------------------------------------------------------TDN 359 (819)
Q Consensus 356 -------------------~---------------------------------------------------------~~~ 359 (819)
. +++
T Consensus 415 ~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~ 494 (941)
T TIGR01517 415 KHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGG 494 (941)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCC
Confidence 0 001
Q ss_pred ceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcE
Q 003452 360 TSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLT 439 (819)
Q Consensus 360 ~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~ 439 (819)
++.+++|||||.+++.|+.+.+.+|...++++ .++++.+.+++++++|+|++++||++++.++.+ ..+..|+|++
T Consensus 495 ~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~----~~~~~e~~l~ 569 (941)
T TIGR01517 495 KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFP----RKDYPNGGLT 569 (941)
T ss_pred cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccc----cccccccCcE
Confidence 14578999999999999988777888888887 788899999999999999999999998654322 1223478999
Q ss_pred EEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhh
Q 003452 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVD 519 (819)
Q Consensus 440 ~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 519 (819)
|+|+++++||+||+++++|++|+++||+++|+||||+.||.+||++|||.++ ...+++|+++++++++++.+.++
T Consensus 570 ~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~-----~~~vi~G~~~~~l~~~el~~~i~ 644 (941)
T TIGR01517 570 LIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF-----GGLAMEGKEFRRLVYEEMDPILP 644 (941)
T ss_pred EEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC-----CceEeeHHHhhhCCHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999865 34799999999999999999999
Q ss_pred hhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 520 KICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 520 ~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
++.||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||.+|+|+||++||++++||||++|++++++|
T Consensus 645 ~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~g 724 (941)
T TIGR01517 645 KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWG 724 (941)
T ss_pred cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcch
Q 003452 600 RCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLIT 679 (819)
Q Consensus 600 R~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~ 679 (819)
|++|+||+|+++|++++|+..+++.+++.++.++.|++++|++|+|+++|.+|+++|++|+|++++|++||++|++++++
T Consensus 725 R~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~ 804 (941)
T TIGR01517 725 RNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLIS 804 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCc---------chhhhHHHHHHHHHHHHHHHHhhhccccccccccccchH
Q 003452 680 NIMWRNLVAQALYQRAVLLTLQFRGESIFGVN---------KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNR 750 (819)
Q Consensus 680 ~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~---------~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~ 750 (819)
+.||++++++++++.++.+++++.+..+++.. ....+|++|++|+++|+||.+++|+.+..++|+++++|+
T Consensus 805 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~ 884 (941)
T TIGR01517 805 RSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR 884 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH
Confidence 99999999999999988877766655444221 256789999999999999999999976558889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhccC
Q 003452 751 LFLGIIGTTIVLQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806 (819)
Q Consensus 751 ~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 806 (819)
+++.++++++++|++++++++.+|++.||++.+|++|++++++.+++.++.|++|+
T Consensus 885 ~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 885 IFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999984
No 4
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.3e-113 Score=1050.11 Aligned_cols=673 Identities=32% Similarity=0.498 Sum_probs=612.8
Q ss_pred CHHHHHHHhCCCcCCCCC-ccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHH-hhhHHHHHHHHHHHHHHHhhcccCcc
Q 003452 100 GIRGVASALETDFDAGIF-GNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDAL-KDLTILILLGCAVLSLAFGIKEHGLK 177 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~-~~~~~~il~v~a~~s~~~g~~~~g~~ 177 (819)
.++++++.|++|.++||+ ++| +++|+++||+|+++.|+++++|+.++++| ++|++++|++++++|+++|
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------- 78 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------- 78 (884)
T ss_pred CHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc-------
Confidence 689999999999999999 656 99999999999999998999999999999 9999999999999999998
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEE
Q 003452 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFL 257 (819)
Q Consensus 178 ~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll 257 (819)
.|.|+++|++++++++.++.+++|+.++++++|.++.+ .+++|+|||++++|+++||||||+|.|++||+|||||+++
T Consensus 79 -~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~-~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii 156 (884)
T TIGR01522 79 -NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVP-PECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIV 156 (884)
T ss_pred -chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEE
Confidence 79999999988898999999999999999999998754 4799999999999999999999999999999999999999
Q ss_pred eccceeEecccccCCCceeeecCCC------------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCC
Q 003452 258 DGHSLQVDESSMTGESDHVEVNSSQ------------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQT 325 (819)
Q Consensus 258 ~g~~l~VDES~LTGES~pv~k~~~~------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t 325 (819)
+|+++.||||+|||||.|+.|.+.. +|++|+||.|.+|.++++|++||.+|++|+|.+++++.+.++|
T Consensus 157 ~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt 236 (884)
T TIGR01522 157 EAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKT 236 (884)
T ss_pred EcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCC
Confidence 9987899999999999999998531 3689999999999999999999999999999999998888899
Q ss_pred hhHHHHHHHHhhHhHHHHHHHHHHHHHHh---------------------------------------------------
Q 003452 326 PLQARLNKLTSSTGKIGLAVAFLVLAVLL--------------------------------------------------- 354 (819)
Q Consensus 326 plq~~l~~~a~~~~~~~l~~a~l~~~v~~--------------------------------------------------- 354 (819)
|+|+.++++++++++++++++++++++.+
T Consensus 237 ~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~ 316 (884)
T TIGR01522 237 PLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLP 316 (884)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchH
Confidence 99999999999988877654444333211
Q ss_pred -------------------------------cc-----------------------------------------------
Q 003452 355 -------------------------------KK----------------------------------------------- 356 (819)
Q Consensus 355 -------------------------------~~----------------------------------------------- 356 (819)
..
T Consensus 317 a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 396 (884)
T TIGR01522 317 SVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKF 396 (884)
T ss_pred HHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCee
Confidence 00
Q ss_pred ----------C--------------------------------------------CCceEEEecchHHHHHHhhhhcccc
Q 003452 357 ----------T--------------------------------------------DNTSHVHWKGAAEMILAMCSSYYDA 382 (819)
Q Consensus 357 ----------~--------------------------------------------~~~~~~~~KGa~e~il~~c~~~~~~ 382 (819)
+ ++++++++||+||.++..|+.+.+.
T Consensus 397 ~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~ 476 (884)
T TIGR01522 397 RNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK 476 (884)
T ss_pred cCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc
Confidence 0 0112467899999999999998877
Q ss_pred cCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHH
Q 003452 383 SGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQ 462 (819)
Q Consensus 383 ~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~ 462 (819)
+|...+++++.++++.+.+++++.+|+|++++||+++ +++++|+|+++++||+|||++++|++|+
T Consensus 477 ~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~---------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~ 541 (884)
T TIGR01522 477 DGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE---------------KGQLTFLGLVGINDPPRPGVKEAVTTLI 541 (884)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------------CCCeEEEEEEeccCcchhHHHHHHHHHH
Confidence 7888899999999999999999999999999999875 2578999999999999999999999999
Q ss_pred hcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhC
Q 003452 463 YAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK 542 (819)
Q Consensus 463 ~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~ 542 (819)
++|++++|+|||++.||.++|+++||... ...+++|+++++++++++.+.++++.||||++|+||.++|+.||++
T Consensus 542 ~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~-----~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 542 TGGVRIIMITGDSQETAVSIARRLGMPSK-----TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999999864 3457899999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 543 GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALL 622 (819)
Q Consensus 543 g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~ 622 (819)
|++|+|+|||+||+|||++||||||||.+|+++|+++||++++||||+++++++++||++|+||+|+++|+++.|+..+.
T Consensus 617 g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~ 696 (884)
T TIGR01522 617 GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALS 696 (884)
T ss_pred CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999977999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 623 INFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQF 702 (819)
Q Consensus 623 ~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~ 702 (819)
+.+++.++..+.|++++|+||+|+++|.+|+++|++|||++++|++||++++++++++.||++++.++++++++.+++++
T Consensus 697 ~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 776 (884)
T TIGR01522 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFV 776 (884)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888889999999999999999999999999999999999999999999999999999999999998877665544
Q ss_pred hhccccCCcchhhhHHHHHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHHH--HHHhHccccccC
Q 003452 703 RGESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVMV--EFLKNFADTERL 779 (819)
Q Consensus 703 ~~~~~~~~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~v--~~~~~~f~~~~l 779 (819)
.... .+.....++|++|++|+++|+||.+|+|+ ++.++|+ ++++|++++.++++++++|++++ ++++.+|++.||
T Consensus 777 ~~~~-~~~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l 854 (884)
T TIGR01522 777 REMQ-DGVITARDTTMTFTCFVFFDMFNALACRS-QTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEAL 854 (884)
T ss_pred HHHc-CCcchhhHHHHHHHHHHHHHHHHHHHHcc-CCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3211 12123457899999999999999999999 4667776 88999999999999999998776 478999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 780 NWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 780 ~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
++.+|++|++++++.+++.++.|++.
T Consensus 855 ~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 855 SIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999875
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2e-113 Score=1054.41 Aligned_cols=693 Identities=27% Similarity=0.437 Sum_probs=607.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.++.+++.|+|+..+||+++| +++|+++||+|++++++.+++|+.++++|+++++++|++++++|++++ .
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~ 80 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------D 80 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------h
Confidence 578899999999999999988 999999999999999999999999999999999999999999999987 7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEec
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDG 259 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g 259 (819)
|+|+++|+++++++..++.+++|+.++++++|+++.. .+++|+|||++++|+++||||||+|.|++||+|||||+++++
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~-~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLAS-PMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 9999999999999999999999999999999998754 489999999999999999999999999999999999999999
Q ss_pred cceeEecccccCCCceeeecCC-------------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC----
Q 003452 260 HSLQVDESSMTGESDHVEVNSS-------------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS---- 322 (819)
Q Consensus 260 ~~l~VDES~LTGES~pv~k~~~-------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~---- 322 (819)
++|.||||+|||||.||.|.+. ..|++|+||.|.+|.++++|++||++|++|||.+++.+...
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999742 24689999999999999999999999999999998864321
Q ss_pred -------------------------------CCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------
Q 003452 323 -------------------------------EQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL----------------- 354 (819)
Q Consensus 323 -------------------------------~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~----------------- 354 (819)
.+||||+++++++++++.+++++++++|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~Va 319 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAIS 319 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 25999999999999988887777666554310
Q ss_pred ---------------------------------------------------------------cc---------------
Q 003452 355 ---------------------------------------------------------------KK--------------- 356 (819)
Q Consensus 355 ---------------------------------------------------------------~~--------------- 356 (819)
..
T Consensus 320 ~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~ 399 (1053)
T TIGR01523 320 IIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNP 399 (1053)
T ss_pred HcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCC
Confidence 00
Q ss_pred ---------------------------------------C-------------------------C---C----------
Q 003452 357 ---------------------------------------T-------------------------D---N---------- 359 (819)
Q Consensus 357 ---------------------------------------~-------------------------~---~---------- 359 (819)
+ + +
T Consensus 400 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE 479 (1053)
T TIGR01523 400 NEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTE 479 (1053)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccH
Confidence 0 0 0
Q ss_pred -----------------------------------------------------------------------ceEEEecch
Q 003452 360 -----------------------------------------------------------------------TSHVHWKGA 368 (819)
Q Consensus 360 -----------------------------------------------------------------------~~~~~~KGa 368 (819)
.+.+++|||
T Consensus 480 ~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGA 559 (1053)
T TIGR01523 480 IAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGA 559 (1053)
T ss_pred HHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCC
Confidence 023578999
Q ss_pred HHHHHHhhhhcccccC-CcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch-----hhhhhhcccCcEEEE
Q 003452 369 AEMILAMCSSYYDASG-NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE-----KDQKKLIEDNLTLLG 442 (819)
Q Consensus 369 ~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~-----~~~~~~~e~~l~~lG 442 (819)
||.++++|+.+...+| ...|++++.++++.+.+++|+++|+|||++|||+++.++.... ...++..|+|++|+|
T Consensus 560 pe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G 639 (1053)
T TIGR01523 560 FERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLG 639 (1053)
T ss_pred hHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEE
Confidence 9999999997765455 5779999999999999999999999999999998865322100 011235689999999
Q ss_pred EEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCC-----CCCccceecccccccCCHHHHHHH
Q 003452 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ-----DTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 443 ~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~-----~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
+++++||+||+++++|++|+++||+|+|+|||++.||.+||++|||..++. +.....+++|++++.++++++.+.
T Consensus 640 ~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~ 719 (1053)
T TIGR01523 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDL 719 (1053)
T ss_pred EEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHH
Confidence 999999999999999999999999999999999999999999999975421 111357999999999999999999
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
++++.||||++|+||.++|+.+|++|++|+|||||+||+|||++||||||||.+|+|+||++||++++||||++|+++++
T Consensus 720 ~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 720 KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCC
Q 003452 598 WGRCVHTNIQKLIQFQLTANVAALLINFVAAVYA---G--EIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVG 672 (819)
Q Consensus 598 ~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~---~--~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~ 672 (819)
+||++|+||+|+++|.++.|+..+++.+++.++. + +.||+++|+||+|+++|.+|+++|++|||++++|++||+.
T Consensus 800 ~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~ 879 (1053)
T TIGR01523 800 EGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHD 879 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCC
Confidence 9999999999999999999999999999888774 2 4799999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHH---hhc--cc-c-------CC---cchhhhHHHHHHHHHHHHHHHHhhhc
Q 003452 673 RTEPLITNIMWRNLVAQALYQRAVLLTLQF---RGE--SI-F-------GV---NKKVKETLIFNTFVLCQVFNEFNARK 736 (819)
Q Consensus 673 r~~~li~~~~~~~i~~~~~~~~~v~~~l~~---~~~--~~-~-------~~---~~~~~~T~~f~~~v~~q~~n~~~~r~ 736 (819)
++++++++.+++.++..++++.+..+..++ ++. .. . +. +...++|+.|.+++++|+++.+++|+
T Consensus 880 ~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~ 959 (1053)
T TIGR01523 880 NEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKD 959 (1053)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998887766554332 211 00 0 00 12357899999999999999999998
Q ss_pred cccccccc----------------cccchHHHHHHHHHHHHHHHHH--HHHHhH-ccccccCChhhHHHHHHHHHHHHHH
Q 003452 737 LEKKNVFE----------------GIHKNRLFLGIIGTTIVLQVVM--VEFLKN-FADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 737 ~~~~~~~~----------------~~~~n~~~~~~i~~~~~~~~~~--v~~~~~-~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
.+ .++|+ +.++|+++++++++++++|+++ +++++. +|++.|+++ +|+++++++++.+++
T Consensus 960 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~ 1037 (1053)
T TIGR01523 960 FD-NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFG 1037 (1053)
T ss_pred Cc-hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHH
Confidence 54 33332 3689999999999988888655 567875 999999997 899999999999999
Q ss_pred HHHHhhcc
Q 003452 798 GWLVKCIP 805 (819)
Q Consensus 798 ~~~~k~i~ 805 (819)
.++.|++.
T Consensus 1038 ~e~~K~~~ 1045 (1053)
T TIGR01523 1038 AEIWKCGK 1045 (1053)
T ss_pred HHHHHHHH
Confidence 99999875
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.7e-111 Score=1040.18 Aligned_cols=702 Identities=26% Similarity=0.387 Sum_probs=609.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc-----c
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE-----H 174 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~-----~ 174 (819)
.++++++.|+++..+||+++| +++|+++||+|++++++++++|+.++++|++|+.++|+++++++++..... +
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~ 98 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEE 98 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCC
Confidence 688999999999999999988 999999999999999899999999999999999999999999987653221 1
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccce
Q 003452 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANG 254 (819)
Q Consensus 175 g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg 254 (819)
.....|++++.+++++++...++.++++++++..+++.++. +.+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 99 ~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~-~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~ 177 (997)
T TIGR01106 99 PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMV-PQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADL 177 (997)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeE
Confidence 12246999998888888888889999999999999998864 35899999999999999999999999999999999999
Q ss_pred EEEeccceeEecccccCCCceeeecCCC--------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 255 LFLDGHSLQVDESSMTGESDHVEVNSSQ--------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 255 ~ll~g~~l~VDES~LTGES~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
++++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.++++|++||.+|++|++.+++++.+.+++|
T Consensus 178 ~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~p 257 (997)
T TIGR01106 178 RIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTP 257 (997)
T ss_pred EEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCc
Confidence 9999988899999999999999997531 25899999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
+|+++++++++++.+++++++++++++.
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~a 337 (997)
T TIGR01106 258 IAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 337 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHH
Confidence 9999999999999888777776655432
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 338 iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~ 417 (997)
T TIGR01106 338 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPIL 417 (997)
T ss_pred HHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCccc
Confidence
Q ss_pred --------------------------------------------------c--cC-CCceEEEecchHHHHHHhhhhccc
Q 003452 355 --------------------------------------------------K--KT-DNTSHVHWKGAAEMILAMCSSYYD 381 (819)
Q Consensus 355 --------------------------------------------------~--~~-~~~~~~~~KGa~e~il~~c~~~~~ 381 (819)
. +. ++.+.+++|||||.++++|+++.
T Consensus 418 ~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~- 496 (997)
T TIGR01106 418 KRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL- 496 (997)
T ss_pred ccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-
Confidence 0 00 01245789999999999999876
Q ss_pred ccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhhcccCcEEEEEEEeeCCCCccHHHH
Q 003452 382 ASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457 (819)
Q Consensus 382 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~v~i~D~lr~~v~~a 457 (819)
.+|...+++++.++.+.+.+++++++|+|++++|||.++.++.... ..+.+..|+|++|+|+++++||+||+++++
T Consensus 497 ~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~a 576 (997)
T TIGR01106 497 IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDA 576 (997)
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHH
Confidence 5789999999999999999999999999999999998865432210 011123488999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------CCccceecccccccCCHHHHHHHh
Q 003452 458 VEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-------------------TSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 458 I~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-------------------~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
|++|+++||+|+|+|||+..||.++|+++|+..++.. .+...+++|++++.++++++.+.+
T Consensus 577 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~ 656 (997)
T TIGR01106 577 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEIL 656 (997)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHH
Confidence 9999999999999999999999999999999764321 012379999999999999999999
Q ss_pred hhhc--eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 519 DKIC--VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 519 ~~~~--v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
+++. ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||||.+|+|+||++||++++||||++|++++
T Consensus 657 ~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 657 KYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV 736 (997)
T ss_pred HhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHH
Confidence 8875 99999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCC-CC
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGR-TE 675 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r-~~ 675 (819)
++||++|.|++++++|+++.|+..+++.+++.++..+.|++++|+||+|+++|++|+++|++|||++++|++||+++ ..
T Consensus 737 ~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~ 816 (997)
T TIGR01106 737 EEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTD 816 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985 67
Q ss_pred CcchHHHHHHHH-HHHHHHHHHHHHHHHh-----hc---cccCC---------c------------------chhhhHHH
Q 003452 676 PLITNIMWRNLV-AQALYQRAVLLTLQFR-----GE---SIFGV---------N------------------KKVKETLI 719 (819)
Q Consensus 676 ~li~~~~~~~i~-~~~~~~~~v~~~l~~~-----~~---~~~~~---------~------------------~~~~~T~~ 719 (819)
+++++.++..++ ..++++.+..++.++. |. ..+++ + ....+|++
T Consensus 817 ~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 896 (997)
T TIGR01106 817 KLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAF 896 (997)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHH
Confidence 899998876643 3354554433332221 10 11111 0 01468999
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHHHhHccccccCChhhHHHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEFLKNFADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
|++++++|+||.+|||+ ++.++|+..++|++++.++++.+++++++ +++++.+|++.|+++.+|++|++++++.+++
T Consensus 897 f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 975 (997)
T TIGR01106 897 FVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVY 975 (997)
T ss_pred HHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 56677865489999999888888877654 4567999999999999999999999999999
Q ss_pred HHHHhhccC
Q 003452 798 GWLVKCIPV 806 (819)
Q Consensus 798 ~~~~k~i~~ 806 (819)
.++.|++..
T Consensus 976 ~~~~k~~~r 984 (997)
T TIGR01106 976 DEIRKLIIR 984 (997)
T ss_pred HHHHHHHHH
Confidence 999998764
No 7
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.9e-110 Score=1015.96 Aligned_cols=680 Identities=23% Similarity=0.335 Sum_probs=584.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc---cCc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE---HGL 176 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~---~g~ 176 (819)
..+.+++.|+++ .+|||++| +++|+++||+|++++++++++|+.++++|++|+.++|++++++|++++.+. ++.
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 577888899998 48999988 999999999999999999999999999999999999999999999987542 222
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeC------CEEEEEecCccccCCEEEEecCCee
Q 003452 177 KEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRN------GRRQQISIFEIVVGDVICLKIGDQV 250 (819)
Q Consensus 177 ~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~Rd------G~~~~i~~~~LvvGDiV~l~~Gd~V 250 (819)
...|.+++.|+++++++..++.+++|+.+++.++|.++.+ ..++|+|| |++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~-~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR-TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 3469999999999999999999999999999999998764 47999999 4899999999999999999999999
Q ss_pred ccceEEEeccceeEecccccCCCceeeecCC---------------------CCCeEeeccccccceEEEEEEEeCCcCh
Q 003452 251 PANGLFLDGHSLQVDESSMTGESDHVEVNSS---------------------QNPFLFSGTKVADGYARMLATSVGMNTT 309 (819)
Q Consensus 251 PaDg~ll~g~~l~VDES~LTGES~pv~k~~~---------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~ 309 (819)
||||++++|+++.||||+|||||.||.|.+. .+|++|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 9999999999989999999999999999741 2478999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------
Q 003452 310 WGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------- 354 (819)
Q Consensus 310 ~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------- 354 (819)
+|||.+++.+ ...++|+|++++++++++..+++.++.+++++..
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~ 345 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAK 345 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 9999999976 6678999999999998776665554444332210
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 346 g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~ 425 (903)
T PRK15122 346 GAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVA 425 (903)
T ss_pred HHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence
Q ss_pred ---------------------------------ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHH
Q 003452 355 ---------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQII 401 (819)
Q Consensus 355 ---------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i 401 (819)
...++++.+++||+||.++++|+++.. +|...+++++.++++.+.+
T Consensus 426 ~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~ 504 (903)
T PRK15122 426 FAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALA 504 (903)
T ss_pred HHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHH
Confidence 001234567899999999999997654 6778899999999999999
Q ss_pred HHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHH
Q 003452 402 QGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA 481 (819)
Q Consensus 402 ~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~ 481 (819)
+.++.+|+|++++|||+++.++... ......|+|++|+|+++++||+|||++++|++|+++||+|+|+||||+.||.+
T Consensus 505 ~~~a~~G~rvlavA~k~~~~~~~~~--~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 505 EAYNADGFRVLLVATREIPGGESRA--QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred HHHHhCCCEEEEEEEeccCcccccc--ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 9999999999999999886532110 01123578999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhh
Q 003452 482 IATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKE 561 (819)
Q Consensus 482 iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~ 561 (819)
||+++||.. ..+++|++++.++++++.+.++++.||||++|+||.++|+.||++|++|||||||+||+||||+
T Consensus 583 IA~~lGI~~-------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 583 ICREVGLEP-------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHcCCCC-------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 999999953 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q 003452 562 TDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQL 641 (819)
Q Consensus 562 AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~ql 641 (819)
|||||||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|.++.|+..++..+++.++..+.|++++|+
T Consensus 656 ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qi 734 (903)
T PRK15122 656 ADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHL 734 (903)
T ss_pred CCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999888888777777799999999
Q ss_pred HHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc--hhhhHHH
Q 003452 642 LWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK--KVKETLI 719 (819)
Q Consensus 642 l~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~~--~~~~T~~ 719 (819)
||+|+++|+ |+++|++|||++++| +||++|+++++++.|+...+..+++.+..++++++ ... .+... ...+|..
T Consensus 735 l~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~t~~ 810 (903)
T PRK15122 735 LLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWF-VFA-ANSVEMQALFQSGW 810 (903)
T ss_pred HHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cCcHhhhhhhHHHH
Confidence 999999995 899999999999999 99999999999998886444444444333332221 111 11111 1345888
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHH--HhHccccccCChhhHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEF--LKNFADTERLNWGQWSACIGFAAASW 795 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~--~~~~f~~~~l~~~~w~~~~~~~~~~~ 795 (819)
|.+++++|++|.+++|+- +.+ +|+|++.+..+.+++++|+++ +++ ++.+|++.|+++.+|+++++++++.+
T Consensus 811 f~~l~~~q~~~~~~~R~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~ 885 (903)
T PRK15122 811 FIEGLLSQTLVVHMLRTQ-KIP----FIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYC 885 (903)
T ss_pred HHHHHHHHHHHHHhhCcC-CCC----cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999984 223 345666555566666666544 455 78999999999999999999999999
Q ss_pred HHHHHHhhc
Q 003452 796 PIGWLVKCI 804 (819)
Q Consensus 796 ~~~~~~k~i 804 (819)
++.++.|.+
T Consensus 886 ~~~e~~k~~ 894 (903)
T PRK15122 886 LVAQGMKRF 894 (903)
T ss_pred HHHHHHHHH
Confidence 888888854
No 8
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.6e-109 Score=1006.11 Aligned_cols=667 Identities=24% Similarity=0.341 Sum_probs=573.9
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
..+.+.+.|+++. +|||++| +++|+++||+|.++.++++++|+.++++|++|++++|++++++|+++| .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5788889999986 6999988 999999999999999999999999999999999999999999999887 7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeC------CEEEEEecCccccCCEEEEecCCeeccc
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRN------GRRQQISIFEIVVGDVICLKIGDQVPAN 253 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~Rd------G~~~~i~~~~LvvGDiV~l~~Gd~VPaD 253 (819)
|++++.|++++++...++.+++++.+++.++|.++.+ .+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~-~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS-NTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 9999999999999999999999999999999998865 47999999 7899999999999999999999999999
Q ss_pred eEEEeccceeEecccccCCCceeeecCCC-----------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC
Q 003452 254 GLFLDGHSLQVDESSMTGESDHVEVNSSQ-----------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS 322 (819)
Q Consensus 254 g~ll~g~~l~VDES~LTGES~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 322 (819)
|++++|+++.||||+|||||.||.|.+.. +|++|+||.|.+|+++++|++||.+|++|||.+++.+.+.
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999998899999999999999998532 3589999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------------------------------------------
Q 003452 323 EQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------------------ 354 (819)
Q Consensus 323 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------------------ 354 (819)
++||+|+.++++++++..++++++.++++++.
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 99999999999999988877777666554321
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~ 440 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASR 440 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhc
Confidence
Q ss_pred --------c------------cCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeee
Q 003452 355 --------K------------KTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414 (819)
Q Consensus 355 --------~------------~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~ 414 (819)
+ ..++...+++||++|.++++|+.+.. +|...+++++.++++.+..+.++.+|+|++++
T Consensus 441 ~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 519 (902)
T PRK10517 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAV 519 (902)
T ss_pred CceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 0 00112357899999999999998754 67778999999999999999999999999999
Q ss_pred ecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003452 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD 494 (819)
Q Consensus 415 a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~ 494 (819)
|||+++.++.. .....|+|++|+|+++++||+||+++++|++|+++||+|+|+||||+.||.+||+++||..
T Consensus 520 A~k~~~~~~~~----~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---- 591 (902)
T PRK10517 520 ATKYLPAREGD----YQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---- 591 (902)
T ss_pred EEecCCccccc----cccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----
Confidence 99987653211 1112378999999999999999999999999999999999999999999999999999953
Q ss_pred CCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 495 TSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 495 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
..+++|+++++++++++.+.++++.||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|
T Consensus 592 ---~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtd 667 (902)
T PRK10517 592 ---GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVD 667 (902)
T ss_pred ---cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCH
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHh
Q 003452 575 VAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~al 654 (819)
+||++||+||+||||++|++++++||++|+||+|+++|.++.|+..++..+++.++..+.||+|+|+||+|+++| ++++
T Consensus 668 vAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~ 746 (902)
T PRK10517 668 IAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQV 746 (902)
T ss_pred HHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHH
Confidence 999999999999999999999999999999999999999999999999888887776668999999999999999 6899
Q ss_pred hhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc----hhhhHHHHHHHHHHHHHH
Q 003452 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK----KVKETLIFNTFVLCQVFN 730 (819)
Q Consensus 655 al~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~~----~~~~T~~f~~~v~~q~~n 730 (819)
+|++|||++++|++||+ |+...+.+.|+...+..+++.+..++++++ . ++... ...+|..|.+++++|+++
T Consensus 747 al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~F~~~~~~q~~~ 821 (902)
T PRK10517 747 AIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISSIFDILTFCLMWW-V---FHANTPETQTLFQSGWFVVGLLSQTLI 821 (902)
T ss_pred hhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---ccccchhhHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 344445555544433333333333222221 1 12111 234456699999999999
Q ss_pred HHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HH--HHhHccccccCC--hhhHHHHHHHHHHHHHHHHHHhhc
Q 003452 731 EFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VE--FLKNFADTERLN--WGQWSACIGFAAASWPIGWLVKCI 804 (819)
Q Consensus 731 ~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~--~~~~~f~~~~l~--~~~w~~~~~~~~~~~~~~~~~k~i 804 (819)
.+++|+.+ . ++|+|++.+..++.+++++++. ++ +++.+|++.||+ +..|++++.++.. ++.++.|-+
T Consensus 822 ~~~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 822 VHMIRTRR-I----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHhhccCC-C----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 99999842 2 4567777777777777776544 34 578899999999 7888888777766 556666654
No 9
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=7.9e-109 Score=1002.49 Aligned_cols=670 Identities=24% Similarity=0.327 Sum_probs=575.9
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.++++++.|+++. +||+++| +++|+++||+|.+++++++++|+.++++|++|++++|++++++|++.+ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 6889999999985 6999988 999999999999999988999999999999999999999999999887 7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEe------CCEEEEEecCccccCCEEEEecCCeeccc
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIR------NGRRQQISIFEIVVGDVICLKIGDQVPAN 253 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R------dG~~~~i~~~~LvvGDiV~l~~Gd~VPaD 253 (819)
|++++.|+++++++..++.+++++.+++.++|+++.+ ..++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~-~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMVK-NTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 9999999999999999999999999999999998755 4799999 99999999999999999999999999999
Q ss_pred eEEEeccceeEecccccCCCceeeecCCC-----------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC
Q 003452 254 GLFLDGHSLQVDESSMTGESDHVEVNSSQ-----------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS 322 (819)
Q Consensus 254 g~ll~g~~l~VDES~LTGES~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 322 (819)
|++++|+++.||||+|||||.||+|.+.. ++++|+||.|.+|.++++|++||.+|++|||.+++.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999998999999999999999998532 3689999999999999999999999999999999987 77
Q ss_pred CCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------------------------------------------
Q 003452 323 EQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------------------ 354 (819)
Q Consensus 323 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------------------ 354 (819)
+++|+|+.++++++++.++++++++++++++.
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 78999999999999998888777766654321
Q ss_pred ----------------------------------------------------------------------c---------
Q 003452 355 ----------------------------------------------------------------------K--------- 355 (819)
Q Consensus 355 ----------------------------------------------------------------------~--------- 355 (819)
.
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~ 405 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASR 405 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhc
Confidence 0
Q ss_pred ---------------------cCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeee
Q 003452 356 ---------------------KTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414 (819)
Q Consensus 356 ---------------------~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~ 414 (819)
..++...+++||+||.++++|+++.. +|...+++++.++++.+.++.++.+|+|++++
T Consensus 406 ~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 484 (867)
T TIGR01524 406 WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAV 484 (867)
T ss_pred CceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 00011456899999999999997744 67778899988999999999999999999999
Q ss_pred ecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003452 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD 494 (819)
Q Consensus 415 a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~ 494 (819)
|||+++.++.. .....|++++|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||+++||..
T Consensus 485 A~~~~~~~~~~----~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~---- 556 (867)
T TIGR01524 485 ATKTLKVGEAD----FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA---- 556 (867)
T ss_pred EEeccCccccc----ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----
Confidence 99988653211 1112368999999999999999999999999999999999999999999999999999964
Q ss_pred CCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 495 TSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 495 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
..+++|.++++++++++.+.++++.||||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|
T Consensus 557 ---~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtd 632 (867)
T TIGR01524 557 ---NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAAD 632 (867)
T ss_pred ---CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccH
Confidence 258999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHh
Q 003452 575 VAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~al 654 (819)
+||++||+||+||||++|++++++||++|+||+|+++|+++.|+..++..+++.++..+.||+++|+||+|+++| +|++
T Consensus 633 vAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~ 711 (867)
T TIGR01524 633 IAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQL 711 (867)
T ss_pred HHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHH
Confidence 999999999999999999999999999999999999999999999998888887777679999999999999999 7999
Q ss_pred hhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-cchhhhHHHHHHHHHHHHHHHHh
Q 003452 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGV-NKKVKETLIFNTFVLCQVFNEFN 733 (819)
Q Consensus 655 al~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~-~~~~~~T~~f~~~v~~q~~n~~~ 733 (819)
+|++|||++++|++||+ ++++.+.+.++..-+..+++.+..++++++.+. ..+. .....+|..|.+++++|++|.++
T Consensus 712 al~~~~~~~~~m~~p~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 712 TLPWDKMDREFLKKPHQ-WEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS-ANTVEEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred hhcCCCCChHhhCCCCC-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccchhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999987666 777655555544333333322222222222111 0010 11234788899999999999999
Q ss_pred hhccccccccccccchHHHHHHHHHHHHHHHHHH--HH--HhHccccccC--ChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 734 ARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMV--EF--LKNFADTERL--NWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 734 ~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v--~~--~~~~f~~~~l--~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
+|+.+ . ++|+|++.+..++++++++++++ ++ ++.+|++.|+ ++..|++++.+++. ++.++.|.+-
T Consensus 790 ~R~~~-~----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 790 IRTEK-I----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred hCcCC-C----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 99742 2 45678888888888888886654 34 3789999987 56678887777665 5677777553
No 10
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-108 Score=995.17 Aligned_cols=671 Identities=34% Similarity=0.519 Sum_probs=600.6
Q ss_pred HHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccch--
Q 003452 103 GVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGW-- 180 (819)
Q Consensus 103 gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~-- 180 (819)
.+...+.++...||+++| +.+|++.||.|++++.+..++|+.++.+|++++..+|++++++|++++ .|
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~--------~~~~ 101 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG--------DWVD 101 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cccc
Confidence 567788899999999976 999999999999999999999999999999999999999999999998 45
Q ss_pred --hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe
Q 003452 181 --YEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD 258 (819)
Q Consensus 181 --~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~ 258 (819)
.+...|+..++++.++...++|++++..++|.++. ..+++|+|||++++|+++||||||+|.+++||+||||+++++
T Consensus 102 ~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~ 180 (917)
T COG0474 102 AGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLE 180 (917)
T ss_pred cCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEE
Confidence 45567788888888999999999999999999886 458999999999999999999999999999999999999999
Q ss_pred ccceeEecccccCCCceeeecC------------CCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 259 GHSLQVDESSMTGESDHVEVNS------------SQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 259 g~~l~VDES~LTGES~pv~k~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
++++.||||+|||||.|++|.+ +.++++|+||.|.+|.++++|++||++|+.|+++.++......+||
T Consensus 181 ~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~ 260 (917)
T COG0474 181 SSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTP 260 (917)
T ss_pred ecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCc
Confidence 9999999999999999999973 3478999999999999999999999999999999999877678999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
+|+++++++.++..++++++++++++..
T Consensus 261 l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~ 340 (917)
T COG0474 261 LQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLN 340 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccc
Confidence 9999999999999999998888877642
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 341 avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al 420 (917)
T COG0474 341 AIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGAL 420 (917)
T ss_pred hhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHH
Confidence
Q ss_pred ---------------------------------------ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHH
Q 003452 355 ---------------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKE 395 (819)
Q Consensus 355 ---------------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~ 395 (819)
+.+++++.+++|||||.++++|+.. |...+++++.++
T Consensus 421 ~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~ 496 (917)
T COG0474 421 VEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLR 496 (917)
T ss_pred HHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHH
Confidence 0112225578999999999999976 788899999999
Q ss_pred HHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCC
Q 003452 396 RFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDN 475 (819)
Q Consensus 396 ~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~ 475 (819)
.+.+..++|+++|||++++|||..+..+... ..+..|+|++|+|+++|+||||+|++++|+.|++|||++||+||||
T Consensus 497 ~~~~~~~~la~~glRvla~A~k~~~~~~~~~---~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~ 573 (917)
T COG0474 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDD---EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDH 573 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccccc---hhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCC
Confidence 9999999999999999999999776543221 1156899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCC
Q 003452 476 VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTND 555 (819)
Q Consensus 476 ~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND 555 (819)
+.||++||++||+..+... ..+++|.+++.++++|+.+.++++.||||+||+||.++|+.||++|++|+|||||+||
T Consensus 574 ~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 574 VETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred HHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999875311 5699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Q 003452 556 APALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGE-I 634 (819)
Q Consensus 556 ~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~-~ 634 (819)
+||||+||||||||++|+|+||++||+++.||||..+..++++||++|.|++|++.|.++.|+..+++.+++.++..+ .
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999998999999999999999999999999999999999999999999999999999999998888777 9
Q ss_pred chhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCc---
Q 003452 635 PLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN--- 711 (819)
Q Consensus 635 pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~--- 711 (819)
|++++|+||+|+++|.+|+++|+.++|+.+.|++||+++.++++++..++.++.+..++.+++.++.|....+....
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 810 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTL 810 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999877777777766655444333222111
Q ss_pred -----chhhhHHHHHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHHHH--HHh-HccccccCChh
Q 003452 712 -----KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVMVE--FLK-NFADTERLNWG 782 (819)
Q Consensus 712 -----~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~v~--~~~-~~f~~~~l~~~ 782 (819)
.....|+.|++++++|.++.+++|.. ..+++. +++.|+.++++++++++++++.+. ++. ..|.+.|++..
T Consensus 811 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~ 889 (917)
T COG0474 811 GLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLF 889 (917)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHH
Confidence 45688999999999999999999984 455665 568999999999998888877653 455 68999999999
Q ss_pred hHHHHHHHHHHHH
Q 003452 783 QWSACIGFAAASW 795 (819)
Q Consensus 783 ~w~~~~~~~~~~~ 795 (819)
+|++++.+.....
T Consensus 890 ~~~~~~~~~~~~~ 902 (917)
T COG0474 890 EWLIAIAVALLLL 902 (917)
T ss_pred HHHHHHHHHHHHH
Confidence 9998887774443
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.1e-104 Score=971.23 Aligned_cols=655 Identities=31% Similarity=0.505 Sum_probs=579.1
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhcccCcc--cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEe
Q 003452 147 VVDALKDLTILILLGCAVLSLAFGIKEHGLK--EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIR 224 (819)
Q Consensus 147 ~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~--~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R 224 (819)
++++|++|++++|++++++|+++++..++.. ..|+|++.|+++++++..++.++++++++++++|.+.. +.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~-~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYE-SEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEE
Confidence 4789999999999999999999987653322 47999999999999999999999999999999998864 45899999
Q ss_pred CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCC-----------CCCeEeeccccc
Q 003452 225 NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS-----------QNPFLFSGTKVA 293 (819)
Q Consensus 225 dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~-----------~~~~l~sGt~v~ 293 (819)
||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.+. .++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998889999999999999999752 238999999999
Q ss_pred cceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHH--------------------
Q 003452 294 DGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVL-------------------- 353 (819)
Q Consensus 294 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~-------------------- 353 (819)
+|+++++|++||.+|++|||.+.+.+.+.++||+|+++++++.+++++.+++++++++++
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 999999999999999999999999888888999999999999988877666555443321
Q ss_pred ------h------------------------------------------------------------------cc-----
Q 003452 354 ------L------------------------------------------------------------------KK----- 356 (819)
Q Consensus 354 ------~------------------------------------------------------------------~~----- 356 (819)
+ ..
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 0 00
Q ss_pred ------------C---------------------------------------C---------------------------
Q 003452 357 ------------T---------------------------------------D--------------------------- 358 (819)
Q Consensus 357 ------------~---------------------------------------~--------------------------- 358 (819)
+ +
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchh
Confidence 0 0
Q ss_pred -------------------------------------------CceEEEecchHHHHHHhhhhcccccCCcccCCHHHHH
Q 003452 359 -------------------------------------------NTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKE 395 (819)
Q Consensus 359 -------------------------------------------~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~ 395 (819)
+++.+++|||||.+++.|+++.+++|...|++++.++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 400 NGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred cccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 0024678999999999999988777889999999999
Q ss_pred HHHHHHHHhhh-CCceeeeeecccCCcccccc---hhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEE
Q 003452 396 RFQQIIQGMAS-SSLRCIAFAHKQVPEEEHRN---EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471 (819)
Q Consensus 396 ~~~~~i~~~a~-~glr~l~~a~~~~~~~~~~~---~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~ml 471 (819)
++.+.+++|++ +|+||+++|||.++.+.... .....+..|+|++|+|+++++||+||+++++|+.|+++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 99999999999 99999999999986532110 011224568999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 003452 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRD 551 (819)
Q Consensus 472 TGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GD 551 (819)
|||+..||.++|+++|+..++.+. ....++|+++.++.+++..+..++..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v-~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDV-TFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccc-cceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 999999999999999998643211 2357899999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003452 552 GTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYA 631 (819)
Q Consensus 552 G~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~ 631 (819)
|.||+|||++|||||||| +|++++|++||+++.||||++|++++++||++|.|++++++|.++.|+..+++.+++.++.
T Consensus 639 G~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 717 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG 717 (917)
T ss_pred CcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999999988888
Q ss_pred CCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc---ccc
Q 003452 632 GEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGE---SIF 708 (819)
Q Consensus 632 ~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~---~~~ 708 (819)
.+.|++++|++|+|+++|.+|+++|+.++|++++|++||+.++++++++.+|++++.+++++.++.+..+++.. .+.
T Consensus 718 ~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 797 (917)
T TIGR01116 718 IPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFT 797 (917)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999977443332111 110
Q ss_pred C--------C------------cchhhhHHHHHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHH-
Q 003452 709 G--------V------------NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVM- 766 (819)
Q Consensus 709 ~--------~------------~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~- 766 (819)
+ . ....++|++|++|+++|+||.+|||+ ++.++|+ ++++|+++++++++++++|+++
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~ 876 (917)
T TIGR01116 798 GCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALS-EDQSLLRMPPWVNKWLIGAICLSMALHFLIL 876 (917)
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcC-CcccccccCCccCHHHHHHHHHHHHHHHHHH
Confidence 0 0 12457899999999999999999999 4567776 7899999999999999999887
Q ss_pred -HHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 767 -VEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 767 -v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
+++++.+|++.|+++.+|++|++++++.+++.++.|++.
T Consensus 877 ~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 877 YVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999999999999764
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=2.8e-97 Score=890.72 Aligned_cols=597 Identities=22% Similarity=0.341 Sum_probs=507.8
Q ss_pred CCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHH
Q 003452 115 GIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVI 194 (819)
Q Consensus 115 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~ 194 (819)
|||++| +++|+++||+|.++++ .+++|+.++++|++|+.++|++++++++++| .|+|++.|++++++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 898887 9999999999999984 5667899999999999999999999999998 6999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCc
Q 003452 195 AVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESD 274 (819)
Q Consensus 195 ~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~ 274 (819)
.++.+++++++++.++|.++. +.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~~-~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQSL-APKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 999999999999999998764 4589999999999999999999999999999999999999999977999999999999
Q ss_pred eeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh
Q 003452 275 HVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL 354 (819)
Q Consensus 275 pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~ 354 (819)
||.|. .++.+|+||.|.+|+++++|++||++|++|+|.+++++.+.+++|+|+.+++++.++.++.+++++++++++.
T Consensus 149 PV~K~--~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~ 226 (755)
T TIGR01647 149 PVTKK--TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF 226 (755)
T ss_pred ceEec--cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 4799999999999999999999999999999999999888889999999999999999888777766665422
Q ss_pred ----------------------------------------------------------------ccC-------------
Q 003452 355 ----------------------------------------------------------------KKT------------- 357 (819)
Q Consensus 355 ----------------------------------------------------------------~~~------------- 357 (819)
.|+
T Consensus 227 ~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~ 306 (755)
T TIGR01647 227 FGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE 306 (755)
T ss_pred HHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEE
Confidence 001
Q ss_pred ----------------------------------------------------------------------CCceEEEecc
Q 003452 358 ----------------------------------------------------------------------DNTSHVHWKG 367 (819)
Q Consensus 358 ----------------------------------------------------------------------~~~~~~~~KG 367 (819)
+|+...++||
T Consensus 307 ~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kG 386 (755)
T TIGR01647 307 ILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKG 386 (755)
T ss_pred EEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeC
Confidence 1333456788
Q ss_pred hHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEee
Q 003452 368 AAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIK 447 (819)
Q Consensus 368 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~ 447 (819)
+||.+++.|+.. ++.++++.+.+++++.+|+|++++||++ .|++++|+|+++++
T Consensus 387 a~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~---------------~e~~l~~~Gli~l~ 440 (755)
T TIGR01647 387 APQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD---------------EEGRWHFLGLLPLF 440 (755)
T ss_pred ChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc---------------CCCCcEEEEEeecc
Confidence 888888888641 3446677888899999999999999972 14689999999999
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
||+|||++++|++||++||+|+|+||||+.||+++|+++||.... .....+.+|.+.+.++++++.+.++++.||||+
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI--YTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC--cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 999999999999999999999999999999999999999997531 123345667777889999999999999999999
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQ 607 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~ 607 (819)
+|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~ 597 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMK 597 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHH
Q 003452 608 KLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLV 687 (819)
Q Consensus 608 k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~ 687 (819)
||++|.++.|+..+++.+++.++.+ .||+|+|+||+|+++|. +++++++|++++. ++|.. ..++ .++..++
T Consensus 598 k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~---~~~~-~~~~~~~ 668 (755)
T TIGR01647 598 SYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQR---WNLR-EVFTMST 668 (755)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCc---cchH-HHHHHHH
Confidence 9999999999998887777766544 46999999999999996 5999999998742 33433 3344 6666666
Q ss_pred HHHHHHHHHHHHHHHhhcc------ccC--CcchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHH
Q 003452 688 AQALYQRAVLLTLQFRGES------IFG--VNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTT 759 (819)
Q Consensus 688 ~~~~~~~~v~~~l~~~~~~------~~~--~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~ 759 (819)
..+.+..+..+.++++... .++ .+....+|++|..+++.|.++.+++|+ +..+|+. ..|++++...++.
T Consensus 669 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~--~~~~~~~-~p~~~l~~~~~~~ 745 (755)
T TIGR01647 669 VLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRT--HGFFWSE-RPGKLLFIAFVIA 745 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheecc--CCCCccc-CCcHHHHHHHHHH
Confidence 7777666654444332221 111 123467899999999999999999997 3334443 3566666655555
Q ss_pred HHHHHHH
Q 003452 760 IVLQVVM 766 (819)
Q Consensus 760 ~~~~~~~ 766 (819)
+++.+++
T Consensus 746 ~~~~~~~ 752 (755)
T TIGR01647 746 QIIATFI 752 (755)
T ss_pred HHHHHHH
Confidence 5544443
No 13
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-99 Score=845.95 Aligned_cols=709 Identities=26% Similarity=0.388 Sum_probs=602.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc-----c
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE-----H 174 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~-----~ 174 (819)
.+++|++++++|..+||+..+ +.+++.+-|+|.+++|+..+-|..+.+++++.+-++++++|+++++..... +
T Consensus 43 ~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~ 120 (1019)
T KOG0203|consen 43 SVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDD 120 (1019)
T ss_pred CHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 799999999999999999988 999999999999999999999999999999999999999999987654211 1
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccce
Q 003452 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANG 254 (819)
Q Consensus 175 g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg 254 (819)
...+..|-|..+...+++...++.+++.+...-.+....+. +..++|+|||+...+..+||||||+|.++-||+||||.
T Consensus 121 ~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~-P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADi 199 (1019)
T KOG0203|consen 121 PSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV-PQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADI 199 (1019)
T ss_pred CCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc-hhhheeeecceeEEechhhcccccceeeccCCccccee
Confidence 11233455544443333334444444444444455555553 45899999999999999999999999999999999999
Q ss_pred EEEeccceeEecccccCCCceeeecCC--------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 255 LFLDGHSLQVDESSMTGESDHVEVNSS--------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 255 ~ll~g~~l~VDES~LTGES~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
+++++..+++|+|+|||||+|.+.++. ..|+-|.+|.+.+|.++++|.+||.+|.+|+|..+....+..+||
T Consensus 200 Riis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~ 279 (1019)
T KOG0203|consen 200 RIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTP 279 (1019)
T ss_pred EEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence 999999999999999999999998753 357889999999999999999999999999999998887899999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
++..++++..++..+++.+++..|++.+
T Consensus 280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLea 359 (1019)
T KOG0203|consen 280 IAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 359 (1019)
T ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeh
Confidence 9999999999998888888877775433
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 360 vetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~ 439 (1019)
T KOG0203|consen 360 VETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVL 439 (1019)
T ss_pred eeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCcee
Confidence
Q ss_pred ----------------------------------------------------cc-CCCceEEEecchHHHHHHhhhhccc
Q 003452 355 ----------------------------------------------------KK-TDNTSHVHWKGAAEMILAMCSSYYD 381 (819)
Q Consensus 355 ----------------------------------------------------~~-~~~~~~~~~KGa~e~il~~c~~~~~ 381 (819)
.+ .+.++.+..|||||.++++|+.+.-
T Consensus 440 kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i 519 (1019)
T KOG0203|consen 440 KRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI 519 (1019)
T ss_pred eeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee
Confidence 11 1224567899999999999998764
Q ss_pred ccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhhcccCcEEEEEEEeeCCCCccHHHH
Q 003452 382 ASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457 (819)
Q Consensus 382 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~v~i~D~lr~~v~~a 457 (819)
+|+..|+++..++.+.+...++...|-|+++++++.+++++++.. .+..+.+.+++.|+|++++-||+|..+++|
T Consensus 520 -~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~A 598 (1019)
T KOG0203|consen 520 -NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDA 598 (1019)
T ss_pred -cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchh
Confidence 899999999999999999999999999999999999987654421 122345668999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------CCccceecccccccCCHHHHHHHh
Q 003452 458 VEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-------------------TSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 458 I~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-------------------~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
+..||.|||+|+|+|||++.||++||++.||..+..+ .....|++|.++.+++.+++++++
T Consensus 599 v~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il 678 (1019)
T KOG0203|consen 599 VGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELL 678 (1019)
T ss_pred hhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHH
Confidence 9999999999999999999999999999998765332 135678999999999999999999
Q ss_pred hhhc--eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 519 DKIC--VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 519 ~~~~--v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.+.. ||||.||+||+.+|+..|++|.+|++||||+||+||||+||||||||++|+|++|+|||+||+||||++|+..+
T Consensus 679 ~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGV 758 (1019)
T KOG0203|consen 679 QNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV 758 (1019)
T ss_pred HhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeec
Confidence 8765 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCC-CCC
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVG-RTE 675 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~-r~~ 675 (819)
++||-+|+|.+|.+.|.++.|+..+...+++.+++.|.|+.++++|.+++.+|..||++||+|+|+.++|+|+|+. +++
T Consensus 759 EEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D 838 (1019)
T KOG0203|consen 759 EEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDD 838 (1019)
T ss_pred ccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 667
Q ss_pred CcchHHHHHHH-HHHHHHHHHHHHHHHHhhc---cc-----cCC------------------c---------chhhhHHH
Q 003452 676 PLITNIMWRNL-VAQALYQRAVLLTLQFRGE---SI-----FGV------------------N---------KKVKETLI 719 (819)
Q Consensus 676 ~li~~~~~~~i-~~~~~~~~~v~~~l~~~~~---~~-----~~~------------------~---------~~~~~T~~ 719 (819)
.|++......- ...+++|.+..|+-+|... .+ .++ . ....+|..
T Consensus 839 ~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taF 918 (1019)
T KOG0203|consen 839 KLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAF 918 (1019)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhhe
Confidence 88888765433 3345666655544333221 11 111 0 34567889
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHH--HHHHHHHhHccccccCChhhHHHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQ--VVMVEFLKNFADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~--~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
|.++|++|+++.+.|.+ ++.++|+.-++||.++.+++..+++. +.+++.....+++.|+.|.+|+..+.++++.|++
T Consensus 919 fvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvy 997 (1019)
T KOG0203|consen 919 FISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVY 997 (1019)
T ss_pred eeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeH
Confidence 99999999999998876 67888986699999988887766554 4445677888999999999999999999999999
Q ss_pred HHHHhhccC--CCCcccc
Q 003452 798 GWLVKCIPV--PAKPFSS 813 (819)
Q Consensus 798 ~~~~k~i~~--~~~~~~~ 813 (819)
+++.|++.+ |..|+.+
T Consensus 998 dE~Rk~~IR~~P~gw~e~ 1015 (1019)
T KOG0203|consen 998 DEVRKLFIRRYPGGWLEK 1015 (1019)
T ss_pred HHHHhHhhhhCCCchhhh
Confidence 999998864 5555543
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=5.3e-95 Score=899.28 Aligned_cols=636 Identities=22% Similarity=0.312 Sum_probs=526.0
Q ss_pred CCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHH
Q 003452 113 DAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFL 192 (819)
Q Consensus 113 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l 192 (819)
..||+++| +++|++.||+|.++.| .++||+++++++.+|+++++++|+++|+..+ .|++++.|++++++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 46999877 9999999999999986 5899999999999999999999988887543 68999999888888
Q ss_pred HHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEe--cCCeeccceEEEeccceeEeccccc
Q 003452 193 VIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLK--IGDQVPANGLFLDGHSLQVDESSMT 270 (819)
Q Consensus 193 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~--~Gd~VPaDg~ll~g~~l~VDES~LT 270 (819)
...++.++++++.++++++.. .+..++|+|||++++|+++||||||+|.|+ +||+|||||++++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777777777666666655543 245799999999999999999999999999 999999999999997 599999999
Q ss_pred CCCceeeecCC----------------CCCeEeecccccc-------ceEEEEEEEeCCcChHHHHHHHhhhcCCCCChh
Q 003452 271 GESDHVEVNSS----------------QNPFLFSGTKVAD-------GYARMLATSVGMNTTWGQMMSQISRDNSEQTPL 327 (819)
Q Consensus 271 GES~pv~k~~~----------------~~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 327 (819)
|||.|+.|.+. +++++|+||.|.+ |.++++|++||.+|..|++++++......++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999752 2357999999984 889999999999999999999998888889999
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------------------------
Q 003452 328 QARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------------------------- 354 (819)
Q Consensus 328 q~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------------------------- 354 (819)
++.+.++...+..++++.++.+++...
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~i 442 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRI 442 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccc
Confidence 999998887776655444333322110
Q ss_pred ----------cc--------------------------------------------------------------------
Q 003452 355 ----------KK-------------------------------------------------------------------- 356 (819)
Q Consensus 355 ----------~~-------------------------------------------------------------------- 356 (819)
.|
T Consensus 443 e~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~ 522 (1054)
T TIGR01657 443 NFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEA 522 (1054)
T ss_pred eecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHh
Confidence 00
Q ss_pred --------CC--------------------------------------------CceEEEecchHHHHHHhhhhcccccC
Q 003452 357 --------TD--------------------------------------------NTSHVHWKGAAEMILAMCSSYYDASG 384 (819)
Q Consensus 357 --------~~--------------------------------------------~~~~~~~KGa~e~il~~c~~~~~~~g 384 (819)
.+ +++.+++|||||.++++|+..
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----- 597 (1054)
T TIGR01657 523 TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----- 597 (1054)
T ss_pred CCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-----
Confidence 00 112378899999999999741
Q ss_pred CcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccc-hhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHh
Q 003452 385 NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRN-EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQY 463 (819)
Q Consensus 385 ~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~-~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~ 463 (819)
..++.+.+.+++|+.+|+||||+|||++++..... ...+++..|+|++|+|+++++||+||+++++|++|++
T Consensus 598 -------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~ 670 (1054)
T TIGR01657 598 -------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR 670 (1054)
T ss_pred -------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH
Confidence 12466788899999999999999999986422110 1123456789999999999999999999999999999
Q ss_pred cCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------------------------------------C
Q 003452 464 AGVNIKMITGDNVFTAKAIATECGILKPGQD------------------------------------------------T 495 (819)
Q Consensus 464 aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------------------------------------------~ 495 (819)
+||+++|+||||+.||.+||++|||..++.. .
T Consensus 671 agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1054)
T TIGR01657 671 ASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLAS 750 (1054)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhccc
Confidence 9999999999999999999999999754310 0
Q ss_pred Cccceeccccccc---CCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCC
Q 003452 496 STGAVLEGEEFRN---YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQG 572 (819)
Q Consensus 496 ~~~~vi~g~~~~~---~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~g 572 (819)
....+++|++++. +.++++.+.++++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||.
T Consensus 751 ~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~-- 828 (1054)
T TIGR01657 751 RYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSE-- 828 (1054)
T ss_pred ceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecc--
Confidence 1136889998865 45678899999999999999999999999999999999999999999999999999999993
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHh
Q 003452 573 TEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLG 652 (819)
Q Consensus 573 t~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ 652 (819)
+|+ ..+||+++.+|||++|++++++||+++.|+++.++|.+.++++..+..++ ++....|++++|+||+|+++++++
T Consensus 829 ~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~ 905 (1054)
T TIGR01657 829 AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPV 905 (1054)
T ss_pred ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHH
Confidence 354 48999999999999999999999999999999999999999887555443 334459999999999999999999
Q ss_pred HhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc--ccc----C--C----cchhhhHHHH
Q 003452 653 ALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGE--SIF----G--V----NKKVKETLIF 720 (819)
Q Consensus 653 alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~--~~~----~--~----~~~~~~T~~f 720 (819)
+++|+.++|.+++|++|| .++++++.++.++++|+++++++.++.++... .++ . . .+...+|++|
T Consensus 906 ~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f 982 (1054)
T TIGR01657 906 ALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF 982 (1054)
T ss_pred HHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH
Confidence 999999999999999999 46899999999999999999988776654432 232 1 1 1345679999
Q ss_pred HHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHH----HHHHHhHccccccCChhhHH
Q 003452 721 NTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVV----MVEFLKNFADTERLNWGQWS 785 (819)
Q Consensus 721 ~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~----~v~~~~~~f~~~~l~~~~w~ 785 (819)
.++.+|.++.+++++. +.++.+++++|+++++.++++++++++ .+++++.+|++.|++. .|-
T Consensus 983 -~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 983 -FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred -HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHH
Confidence 5666666666777764 677778999999998888887666653 2478899999999985 443
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.7e-76 Score=731.42 Aligned_cols=659 Identities=21% Similarity=0.277 Sum_probs=470.4
Q ss_pred cCCCccCCCCCchH---HHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHH
Q 003452 130 FSSNTYKKPPSKSL---FYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNR 206 (819)
Q Consensus 130 ~G~N~~~~~~~~~~---~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~ 206 (819)
|.+|.+...+...+ ++.+|+||+.+.++++++.++++++.++.+.+ ++..+. .++++..++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~----~~t~~~---pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY----RGTSIV---PLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC----ccHhHH---hHHHHHHHHHHHHHHHHH
Confidence 56788877655444 68999999999999999999999887665433 222222 222233334444444444
Q ss_pred HHHHHhcccCCcceEEEeC-CEEEEEecCccccCCEEEEecCCeeccceEEEeccc----eeEecccccCCCceeeecCC
Q 003452 207 QFDKFSKVSNNIQIDVIRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHS----LQVDESSMTGESDHVEVNSS 281 (819)
Q Consensus 207 ~~~~l~~~~~~~~~~V~Rd-G~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~----l~VDES~LTGES~pv~k~~~ 281 (819)
+.++.++..++..++|+|+ |++++++++||+|||+|.|++||+|||||++++++. +.||||+|||||.|+.|.+.
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 4443333334568999997 899999999999999999999999999999998543 69999999999999998642
Q ss_pred ----------------------------------------------CCCeEeecccccc-ceEEEEEEEeCCcChHHHHH
Q 003452 282 ----------------------------------------------QNPFLFSGTKVAD-GYARMLATSVGMNTTWGQMM 314 (819)
Q Consensus 282 ----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 314 (819)
.++++++||.+.+ |.+.++|++||.+|.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n- 232 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN- 232 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc-
Confidence 1257889999998 9999999999999977653
Q ss_pred HHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH-------------------------------------Hh---
Q 003452 315 SQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV-------------------------------------LL--- 354 (819)
Q Consensus 315 ~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-------------------------------------~~--- 354 (819)
......++|++|++++++..++..+.++++++++++ +.
T Consensus 233 --~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 233 --ATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred --CCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 445567789999999999987766555444333221 00
Q ss_pred -----------------------------------------------------ccCCCceE--------E------Eecc
Q 003452 355 -----------------------------------------------------KKTDNTSH--------V------HWKG 367 (819)
Q Consensus 355 -----------------------------------------------------~~~~~~~~--------~------~~KG 367 (819)
.|++|+.. + |.++
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 23333210 0 0000
Q ss_pred --------------------------------h-----------------HHH--HHHhhhhcc----cc----------
Q 003452 368 --------------------------------A-----------------AEM--ILAMCSSYY----DA---------- 382 (819)
Q Consensus 368 --------------------------------a-----------------~e~--il~~c~~~~----~~---------- 382 (819)
. .+. .+..|.... ++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 0 000 122232110 00
Q ss_pred --------------------------------cCCc--------ccC---------------------------------
Q 003452 383 --------------------------------SGNI--------KYL--------------------------------- 389 (819)
Q Consensus 383 --------------------------------~g~~--------~~l--------------------------------- 389 (819)
.|.. .|+
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~ 550 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRL 550 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHh
Confidence 0000 000
Q ss_pred ---CHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh------------------hhhhcccCcEEEEEEEeeC
Q 003452 390 ---DDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD------------------QKKLIEDNLTLLGLVGIKD 448 (819)
Q Consensus 390 ---~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~------------------~~~~~e~~l~~lG~v~i~D 448 (819)
+++.++.+.+.+++++.+|+||+++|||.+++++...+.. ..+.+|+|++|+|+++++|
T Consensus 551 ~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD 630 (1057)
T TIGR01652 551 SSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIED 630 (1057)
T ss_pred hccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhh
Confidence 1223556778899999999999999999997654321100 0134789999999999999
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------------------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD---------------------------------- 494 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~---------------------------------- 494 (819)
|+|||++++|+.|++|||+|||+|||+.+||.+||++|||..++..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999875431
Q ss_pred --CCccceecccccccCCHHH----HHHHhhhhc--eeccCCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 495 --TSTGAVLEGEEFRNYTHEE----RMEKVDKIC--VMARSSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 495 --~~~~~vi~g~~~~~~~~~~----~~~~~~~~~--v~ar~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
....++++|+++..+.+++ +.+.+.++. |+||++|+||.++|+.+|+. |++|+|+|||+||+|||++||||
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 0123588999887655433 445556565 99999999999999999998 99999999999999999999999
Q ss_pred eeeCCCChHHHHhhcCEEEeCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchhHHHH
Q 003452 566 LSMGIQGTEVAKESSDIVILDDNFASVARVL-RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG---EIPLTAVQL 641 (819)
Q Consensus 566 Iamg~~gt~~ak~aaDivl~dd~f~~i~~~i-~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~---~~pl~~~ql 641 (819)
|++.+....+|+++||+++. +|+.+.+++ .+||+.|.|+++++.|.++.|++.+++.+++.++.+ .+|+.++++
T Consensus 791 Igi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l 868 (1057)
T TIGR01652 791 VGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYM 868 (1057)
T ss_pred eEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 97753333379999999998 599999998 559999999999999999999999999999887654 467899999
Q ss_pred HHHHhhhhhHhHhhhcc--cCCcccccCCCCC----CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccc---c--C-
Q 003452 642 LWVNLIMDTLGALALAT--EKPTKELMDKPPV----GRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESI---F--G- 709 (819)
Q Consensus 642 l~vnli~d~l~alal~~--e~p~~~lm~~~P~----~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~---~--~- 709 (819)
+|+|++++.+|+++++. +++++++|.++|+ +++.++++...+..|++.+++|.++++++.+..... . |
T Consensus 869 ~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~ 948 (1057)
T TIGR01652 869 VLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGS 948 (1057)
T ss_pred HHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCc
Confidence 99999999999999975 4677889999997 567889999888889999999999887665433211 1 1
Q ss_pred -CcchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHHHHHhHcc---------ccccC
Q 003452 710 -VNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFA---------DTERL 779 (819)
Q Consensus 710 -~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f---------~~~~l 779 (819)
.+.....+++|.+.++...+..+..- + ..+|+.+..+.+++++.++.....+.++ ...--
T Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
T TIGR01652 949 LDDFSSVGVIVFTALVVIVNLKIALEI-----N-----RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMG 1018 (1057)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHH-----h-----HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHc
Confidence 11234456666666555544432110 0 1122222233333333222222122111 01112
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhccCCCCc
Q 003452 780 NWGQWSACIGFAAASWPIGWLVKCIPVPAKP 810 (819)
Q Consensus 780 ~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~ 810 (819)
++..|+.+++..++++...++.|++..-..|
T Consensus 1019 s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 1019 TFGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5778988888888888888888877654444
No 16
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-76 Score=669.21 Aligned_cols=630 Identities=23% Similarity=0.307 Sum_probs=498.1
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHH
Q 003452 112 FDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVF 191 (819)
Q Consensus 112 ~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~ 191 (819)
...||+..+ +.+|+..||+|.+..+ .++.++++.++.-+|+++++.++.++|+.-+ ++|++.+|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHH
Confidence 357998876 9999999999999985 8899999999999999999999999997655 5667777776666
Q ss_pred HHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEec-CCeeccceEEEeccceeEeccccc
Q 003452 192 LVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKI-GDQVPANGLFLDGHSLQVDESSMT 270 (819)
Q Consensus 192 l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~-Gd~VPaDg~ll~g~~l~VDES~LT 270 (819)
..++++.+...++++.++++.+. ...|+|+|||.+++|+++||||||++.+.+ |-..|||+++++|++ .||||+||
T Consensus 226 ~Si~~sv~e~r~qs~rlr~mv~~--~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLT 302 (1140)
T KOG0208|consen 226 YSIVLSVYETRKQSIRLRSMVKF--TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLT 302 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeeccccc
Confidence 66666666666666666666554 347999999999999999999999999988 899999999999998 89999999
Q ss_pred CCCceeeecCC-----------------CCCeEeecccccc------ceEEEEEEEeCCcChHHHHHHHhhhcCCCCChh
Q 003452 271 GESDHVEVNSS-----------------QNPFLFSGTKVAD------GYARMLATSVGMNTTWGQMMSQISRDNSEQTPL 327 (819)
Q Consensus 271 GES~pv~k~~~-----------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 327 (819)
|||.||.|.+. ..+++|+||++++ |.+.+.|++||.+|..|++.+.+...+.....+
T Consensus 303 GESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkf 382 (1140)
T KOG0208|consen 303 GESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKF 382 (1140)
T ss_pred CCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHH
Confidence 99999999863 3578999999985 789999999999999999999997653333333
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------------------------
Q 003452 328 QARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------------------------- 354 (819)
Q Consensus 328 q~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------------------------- 354 (819)
-+-.-++. ....++|++.|++..
T Consensus 383 yrds~~fi----~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 383 YRDSFKFI----LFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 33333332 333333333333221
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence
Q ss_pred ---ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhh
Q 003452 355 ---KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQ 430 (819)
Q Consensus 355 ---~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~ 430 (819)
...+....+|+|||||.|.+.|.. +..++.+++.++.|+.+|+|++|+|+|+++..... ....+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~ 686 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLS 686 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhcc
Confidence 011234668999999999999975 34466789999999999999999999999765211 11234
Q ss_pred hhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------
Q 003452 431 KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD---------------- 494 (819)
Q Consensus 431 ~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~---------------- 494 (819)
++.+|+|++|+|++.+++++|++++.+|++|++|.|+++|+||||..||..+||+||+..+...
T Consensus 687 Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~ 766 (1140)
T KOG0208|consen 687 RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQ 766 (1140)
T ss_pred HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCce
Confidence 7789999999999999999999999999999999999999999999999999999999876321
Q ss_pred ----------------------------------CCccceecccccccC---CHHHHHHHhhhhceeccCCHhhHHHHHH
Q 003452 495 ----------------------------------TSTGAVLEGEEFRNY---THEERMEKVDKICVMARSSPFDKLLMVQ 537 (819)
Q Consensus 495 ----------------------------------~~~~~vi~g~~~~~~---~~~~~~~~~~~~~v~ar~sP~~K~~iV~ 537 (819)
.+..++++|+.|+-+ ..+.+..++.+..||||++|.||.++|+
T Consensus 767 i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie 846 (1140)
T KOG0208|consen 767 IVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIE 846 (1140)
T ss_pred eEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHH
Confidence 023467788887644 3567788888999999999999999999
Q ss_pred HHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 538 CLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTAN 617 (819)
Q Consensus 538 ~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~n 617 (819)
.||+.|+.|+|+|||+|||.|||+||+|||++.++ |.-||.+...-.+.++++++|++||+.+..-...++|...|.
T Consensus 847 ~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs 923 (1140)
T KOG0208|consen 847 ALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYS 923 (1140)
T ss_pred HHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999998543 555699998888999999999999999999999999988887
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 003452 618 VAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVL 697 (819)
Q Consensus 618 v~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~ 697 (819)
++..+..+ .++....-++..|.++++++..++.|++++..+|..++-..|| +..|+++..+..+++|.++...+.
T Consensus 924 ~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q 998 (1140)
T KOG0208|consen 924 AIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQ 998 (1140)
T ss_pred HHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHH
Confidence 76544332 2455678899999999999999999999999999999988888 556999999999999988877777
Q ss_pred HHHHHhhc--cccCC--------cchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHH
Q 003452 698 LTLQFRGE--SIFGV--------NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMV 767 (819)
Q Consensus 698 ~~l~~~~~--~~~~~--------~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v 767 (819)
+...+... .|+.. ..+..+|.+|..-.|.-+++.+..-. +.++.+++|+|+.|...+.......+.++
T Consensus 999 ~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S~--g~pfr~pl~~n~~f~~~i~~i~~~~i~l~ 1076 (1140)
T KOG0208|consen 999 WILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLSK--GSPFRRPLWKNVLFKVFITVIILSTIYLL 1076 (1140)
T ss_pred HhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeecc--CCcccCchhcCceeeeehhhHHhhhhhhh
Confidence 76655432 34432 13456788887666666666543222 55666799999988766554444333322
Q ss_pred H----H-HhHccccccCCh
Q 003452 768 E----F-LKNFADTERLNW 781 (819)
Q Consensus 768 ~----~-~~~~f~~~~l~~ 781 (819)
. + ..+.++.++.+-
T Consensus 1077 ~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1077 FVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred hccccchhhhhhceeccCc
Confidence 1 1 113466666655
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.3e-72 Score=652.69 Aligned_cols=417 Identities=25% Similarity=0.363 Sum_probs=340.6
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhccc--Cccc-chhhHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHhcccCCcce
Q 003452 148 VDALKDLTILILLGCAVLSLAFGIKEH--GLKE-GWYEGGSILVAVFLVIAVSAGS----NFTQNRQFDKFSKVSNNIQI 220 (819)
Q Consensus 148 ~~~~~~~~~~il~v~a~~s~~~g~~~~--g~~~-~~~~~~~i~~~v~l~~~v~~~~----~~~~~~~~~~l~~~~~~~~~ 220 (819)
...+++|+.++|+++++++++++...+ +... .+++++.|++.++++..++.+. +++.+++.++|.+..++.++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 356789999999999999999986532 1111 2366778888887777776666 67777778888887655456
Q ss_pred E-EEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCC-CCCeEeeccccccceEE
Q 003452 221 D-VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS-QNPFLFSGTKVADGYAR 298 (819)
Q Consensus 221 ~-V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~-~~~~l~sGt~v~~G~~~ 298 (819)
+ |.|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.||.|+++ +.+.+|+||.|.+|+++
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~ 185 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLE 185 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEE
Confidence 5 7799999999999999999999999999999999999987 9999999999999999853 11569999999999999
Q ss_pred EEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH---------------H--h-------
Q 003452 299 MLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV---------------L--L------- 354 (819)
Q Consensus 299 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v---------------~--~------- 354 (819)
++|+++|.+|++|||.+++++++.++||+|..+..+...+..+.+++.+..+.+ + +
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhHH
Confidence 999999999999999999999999999999988887655433322221111100 0 0
Q ss_pred -------------------------------------ccCCCce------------------------------------
Q 003452 355 -------------------------------------KKTDNTS------------------------------------ 361 (819)
Q Consensus 355 -------------------------------------~~~~~~~------------------------------------ 361 (819)
.|++|+.
T Consensus 266 ~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~s~~P~ 345 (673)
T PRK14010 266 GLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPE 345 (673)
T ss_pred HHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCCCCChH
Confidence 1222210
Q ss_pred --------------------------------------EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHH
Q 003452 362 --------------------------------------HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQG 403 (819)
Q Consensus 362 --------------------------------------~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~ 403 (819)
..+.||++|.+++.|+. +|...+ ..+.+.+++
T Consensus 346 ~~AIv~~a~~~~~~~~~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~ 415 (673)
T PRK14010 346 GRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKG 415 (673)
T ss_pred HHHHHHHHHHcCCCchhhhcceeccccccceeEEEECCEEEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHH
Confidence 12335555555555542 111111 124455667
Q ss_pred hhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 003452 404 MASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA 483 (819)
Q Consensus 404 ~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA 483 (819)
++++|+|+++++ .|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||
T Consensus 416 ~a~~G~~~l~v~--------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA 475 (673)
T PRK14010 416 VSKKGGTPLVVL--------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIA 475 (673)
T ss_pred HHhCCCeEEEEE--------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 888888888753 256899999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC
Q 003452 484 TECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETD 563 (819)
Q Consensus 484 ~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad 563 (819)
+++||.+ ++||++||||.++|+.+|++|++|+|||||+||+|||++||
T Consensus 476 ~elGI~~--------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~AD 523 (673)
T PRK14010 476 KEAGVDR--------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEAN 523 (673)
T ss_pred HHcCCce--------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCC
Confidence 9999975 89999999999999999999999999999999999999999
Q ss_pred cceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 564 IGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAA 628 (819)
Q Consensus 564 vGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~ 628 (819)
|||||| +|||+||++||+|++||||++|++++++||++|.|+++++.|+++.|+...+..+.+.
T Consensus 524 VGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~ 587 (673)
T PRK14010 524 VGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAM 587 (673)
T ss_pred EEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999998766655543
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.8e-70 Score=638.05 Aligned_cols=407 Identities=25% Similarity=0.341 Sum_probs=338.6
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhccc------CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceE
Q 003452 148 VDALKDLTILILLGCAVLSLAFGIKEH------GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQID 221 (819)
Q Consensus 148 ~~~~~~~~~~il~v~a~~s~~~g~~~~------g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (819)
..+|+||+.++|++++++++++++... .+..+|..++.+++.+++..+++++++++.++++++|.++.+...++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 457889999999999999999986432 12245666677777777777888899999999999999987655799
Q ss_pred EEeCCE-EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCC-CCeEeeccccccceEEE
Q 003452 222 VIRNGR-RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQ-NPFLFSGTKVADGYARM 299 (819)
Q Consensus 222 V~RdG~-~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~-~~~l~sGt~v~~G~~~~ 299 (819)
|+|||+ +++|++++|++||+|.+++||+|||||++++|.. .||||++||||.||.|+++. .+.+|+||.|.+|.+++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 8999999999999999999999999999999986 99999999999999998531 23499999999999999
Q ss_pred EEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH-H------------------h------
Q 003452 300 LATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV-L------------------L------ 354 (819)
Q Consensus 300 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-~------------------~------ 354 (819)
+|+++|.+|++|||++++++++.++||+|..++.+...+..+.+++++.++.+ + +
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcccchhhh
Confidence 99999999999999999999999999999999887766544333222111100 0 0
Q ss_pred ------------------------------------ccCCCce-------------------------------------
Q 003452 355 ------------------------------------KKTDNTS------------------------------------- 361 (819)
Q Consensus 355 ------------------------------------~~~~~~~------------------------------------- 361 (819)
.|++|+.
T Consensus 267 l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~s~hP~~ 346 (679)
T PRK01122 267 LLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLADETPEG 346 (679)
T ss_pred HHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCCCCCchH
Confidence 2233211
Q ss_pred -----------------------------------------EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHH
Q 003452 362 -----------------------------------------HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQI 400 (819)
Q Consensus 362 -----------------------------------------~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 400 (819)
..+.||++|.+++.|.. +|.. ..+++.+.
T Consensus 347 ~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~----~g~~------~~~~~~~~ 416 (679)
T PRK01122 347 RSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVES----NGGH------FPAELDAA 416 (679)
T ss_pred HHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHh----cCCc------ChHHHHHH
Confidence 12344555555544432 1111 12345667
Q ss_pred HHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHH
Q 003452 401 IQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK 480 (819)
Q Consensus 401 i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~ 480 (819)
+++++++|+|++++|+ |++++|+++++||+|||++++|++||++||+++|+||||+.||.
T Consensus 417 ~~~~a~~G~~~l~va~--------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~ 476 (679)
T PRK01122 417 VDEVARKGGTPLVVAE--------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAA 476 (679)
T ss_pred HHHHHhCCCcEEEEEE--------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 7788999999999883 46899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhh
Q 003452 481 AIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALK 560 (819)
Q Consensus 481 ~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~ 560 (819)
+||+++||.+ ++||++||||.++|+.+|++|++|+|||||+||+|||+
T Consensus 477 aIA~elGId~--------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa 524 (679)
T PRK01122 477 AIAAEAGVDD--------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALA 524 (679)
T ss_pred HHHHHcCCcE--------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence 9999999965 89999999999999999999999999999999999999
Q ss_pred hCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 561 ETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVA 619 (819)
Q Consensus 561 ~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~ 619 (819)
+|||||||| +|||+||++||+|++||||++|++++++||++.-.--..-.|++. |-+
T Consensus 525 ~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 525 QADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred hCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 999999999 999999999999999999999999999999999766666778876 554
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=9.5e-68 Score=651.91 Aligned_cols=553 Identities=19% Similarity=0.278 Sum_probs=420.0
Q ss_pred HhcCCCccCCCCCc---hHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhH
Q 003452 128 EAFSSNTYKKPPSK---SLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQ 204 (819)
Q Consensus 128 ~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~ 204 (819)
..|..|.+...|-. -+.+.+|+||+.+.++.+++.+++.++..+...++ .+.++.++++..++++.+..+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~-------~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR-------GASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc-------chHHHHHHHHHHHHHHHHHHH
Confidence 35888988765322 23466789999999999999999987766544332 122334444444555555555
Q ss_pred HHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe-----ccceeEecccccCCCceeeec
Q 003452 205 NRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD-----GHSLQVDESSMTGESDHVEVN 279 (819)
Q Consensus 205 ~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~-----g~~l~VDES~LTGES~pv~k~ 279 (819)
+.+.++.++..++..++|+|+|.+++++++||+|||+|.|++||+|||||++++ |.+ .||||+|||||.|+.|.
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~-~Vdts~LdGEt~~k~k~ 236 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVA-YVQTINLDGESNLKTRY 236 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceE-EEEccccCCeeeeeEec
Confidence 555555554445568999999999999999999999999999999999999998 555 99999999999999996
Q ss_pred CC-------------------------------------------CCCeEeeccccccc-eEEEEEEEeCCcChHHHHHH
Q 003452 280 SS-------------------------------------------QNPFLFSGTKVADG-YARMLATSVGMNTTWGQMMS 315 (819)
Q Consensus 280 ~~-------------------------------------------~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g~i~~ 315 (819)
+. .+++++.||.+... .+.++|++||.+|. ++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~ 313 (1178)
T PLN03190 237 AKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AML 313 (1178)
T ss_pred ccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---Hhh
Confidence 32 12345555555543 69999999999996 454
Q ss_pred HhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHH--------------------------------------------
Q 003452 316 QISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLA-------------------------------------------- 351 (819)
Q Consensus 316 ~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~-------------------------------------------- 351 (819)
.-.....+.+++++.+|++..++..+.+++++++.+
T Consensus 314 N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 314 NNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred cCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHH
Confidence 444556788999999999987766555444322210
Q ss_pred -----HHh--------------------------------------------------------ccCCCc----------
Q 003452 352 -----VLL--------------------------------------------------------KKTDNT---------- 360 (819)
Q Consensus 352 -----v~~--------------------------------------------------------~~~~~~---------- 360 (819)
+++ .|++|+
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 110 122322
Q ss_pred --------------------------------------------------------------------------------
Q 003452 361 -------------------------------------------------------------------------------- 360 (819)
Q Consensus 361 -------------------------------------------------------------------------------- 360 (819)
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence
Q ss_pred ---------------------------------------------------------------------------eEEEe
Q 003452 361 ---------------------------------------------------------------------------SHVHW 365 (819)
Q Consensus 361 ---------------------------------------------------------------------------~~~~~ 365 (819)
+.+++
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 01122
Q ss_pred cchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh----------------
Q 003452 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD---------------- 429 (819)
Q Consensus 366 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~---------------- 429 (819)
|||+|.++++|+.. .++..++.+.+.+++||.+|+|||++|||+++++++..+..
T Consensus 634 KGA~e~il~~~~~~---------~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l 704 (1178)
T PLN03190 634 KGADTSMFSVIDRS---------LNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALL 704 (1178)
T ss_pred ecCcHHHHHhhccc---------ccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHH
Confidence 22222222222111 01223556778899999999999999999997654332110
Q ss_pred --hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------
Q 003452 430 --QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD------------- 494 (819)
Q Consensus 430 --~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------- 494 (819)
..+.+|+|++++|+++++||+|++++++|++|+++||++||+|||+.+||.+||++|||.+++..
T Consensus 705 ~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~ 784 (1178)
T PLN03190 705 RKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCR 784 (1178)
T ss_pred HhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHH
Confidence 02356899999999999999999999999999999999999999999999999999999866421
Q ss_pred -------------------------------CCccceecccccccCCH----HHHHHHhhhhc--eeccCCHhhHHHHHH
Q 003452 495 -------------------------------TSTGAVLEGEEFRNYTH----EERMEKVDKIC--VMARSSPFDKLLMVQ 537 (819)
Q Consensus 495 -------------------------------~~~~~vi~g~~~~~~~~----~~~~~~~~~~~--v~ar~sP~~K~~iV~ 537 (819)
.+..++++|.++..+.+ +++.+...++. ||||++|+||.++|+
T Consensus 785 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~ 864 (1178)
T PLN03190 785 KSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVA 864 (1178)
T ss_pred HHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHH
Confidence 01237889999887765 45666666666 799999999999999
Q ss_pred HHHhC-CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 003452 538 CLKQK-GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW-GRCVHTNIQKLIQFQLT 615 (819)
Q Consensus 538 ~L~~~-g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~-gR~~~~ni~k~i~f~l~ 615 (819)
.+|+. +++|+|+|||+||+|||++|||||++.+....+|+.+||+.+. .|..+.+++.+ ||+.|.|+.+.+.|.++
T Consensus 865 ~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 865 LVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFY 942 (1178)
T ss_pred HHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99998 5899999999999999999999996543444499999999998 89999999998 99999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCc---hhHHHHHHHHhhhhhHhHhhhc-cc--CCcccccCCCCCC---CCCCcchHHHHHHH
Q 003452 616 ANVAALLINFVAAVYAGEIP---LTAVQLLWVNLIMDTLGALALA-TE--KPTKELMDKPPVG---RTEPLITNIMWRNL 686 (819)
Q Consensus 616 ~nv~~i~~~~~~~~~~~~~p---l~~~qll~vnli~d~l~alal~-~e--~p~~~lm~~~P~~---r~~~li~~~~~~~i 686 (819)
+|++..+++|++.+++++++ +..+-+..+|++++.+|.++++ +| -|.+.+++.|-.+ ++...++...++.|
T Consensus 943 KN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w 1022 (1178)
T PLN03190 943 RNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLT 1022 (1178)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHH
Confidence 99999999999988877554 4678899999999999999985 43 4666677776554 35678898888889
Q ss_pred HHHHHHHHHHHHHHHH
Q 003452 687 VAQALYQRAVLLTLQF 702 (819)
Q Consensus 687 ~~~~~~~~~v~~~l~~ 702 (819)
++.++||.++++++.+
T Consensus 1023 ~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1023 MIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998886654
No 20
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-67 Score=612.06 Aligned_cols=449 Identities=26% Similarity=0.408 Sum_probs=354.2
Q ss_pred CchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHhccc
Q 003452 140 SKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQFDKFSKVS 215 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~~~~l~~~~ 215 (819)
+.+|++-.|+.++... ..+..++++.+++++.+..-.. .||+..+++++++++ -+++....-+..++.++|.++.
T Consensus 131 g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~ 209 (713)
T COG2217 131 GWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLA 209 (713)
T ss_pred hHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 6778888888888763 2334444445555554321111 466666666655544 4555555556666666777765
Q ss_pred CCcceEEEe-CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeecccccc
Q 003452 216 NNIQIDVIR-NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVAD 294 (819)
Q Consensus 216 ~~~~~~V~R-dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~ 294 (819)
++ .+++++ ||++++||++||++||+|.|+|||+||+||++++|++ .||||++||||.||+|. .|+.|++||.|.+
T Consensus 210 p~-~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~--~Gd~V~aGtiN~~ 285 (713)
T COG2217 210 PK-TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKK--PGDEVFAGTVNLD 285 (713)
T ss_pred CC-EEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecC--CCCEEeeeEEECC
Confidence 44 676665 6669999999999999999999999999999999999 99999999999999999 5899999999999
Q ss_pred ceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHhcc------------------
Q 003452 295 GYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKK------------------ 356 (819)
Q Consensus 295 G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~------------------ 356 (819)
|..+++|+++|.+|.+++|++++++++..|+|.|+.+|+++.+++|+.+++++++|++|...
T Consensus 286 G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVI 365 (713)
T COG2217 286 GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVI 365 (713)
T ss_pred ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheee
Confidence 99999999999999999999999999999999999999999999999999999999877400
Q ss_pred -------------------CCCceEEEecchH--HHHHHhhhhcccccCCcc----------cCCHHHHHHHHHHHHHhh
Q 003452 357 -------------------TDNTSHVHWKGAA--EMILAMCSSYYDASGNIK----------YLDDNEKERFQQIIQGMA 405 (819)
Q Consensus 357 -------------------~~~~~~~~~KGa~--e~il~~c~~~~~~~g~~~----------~l~~~~~~~~~~~i~~~a 405 (819)
..-+..++.||.. |.+-+.-+-.+||+|+++ +.++ ..+++......+.
T Consensus 366 aCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~L~laAalE 444 (713)
T COG2217 366 ACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLALAAALE 444 (713)
T ss_pred eCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHHHHHHHHHH
Confidence 0001124556533 444444455688888865 2221 2223333333444
Q ss_pred hCCceeeeeeccc---------------CCccccc----------------------ch--hhh----h------hhccc
Q 003452 406 SSSLRCIAFAHKQ---------------VPEEEHR----------------------NE--KDQ----K------KLIED 436 (819)
Q Consensus 406 ~~glr~l~~a~~~---------------~~~~~~~----------------------~~--~~~----~------~~~e~ 436 (819)
..+.|+++-|... ++..+.. .. ... . -....
T Consensus 445 ~~S~HPiA~AIv~~a~~~~~~~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~ 524 (713)
T COG2217 445 QHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAV 524 (713)
T ss_pred hcCCChHHHHHHHHHHhcCCCCccceeeeccCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEE
Confidence 4444444333111 1100000 00 000 0 12345
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
|..++|+++++|++||+++++|++||+.|+++.|+||||..+|++||+++||.+
T Consensus 525 dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------------------------- 578 (713)
T COG2217 525 DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------------------------- 578 (713)
T ss_pred CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh--------------------------
Confidence 778999999999999999999999999999999999999999999999999965
Q ss_pred HhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 517 KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 517 ~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
++|.+.|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|||+|+|+||++|++|++..+++++
T Consensus 579 ------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 579 ------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred ------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVA 627 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~ 627 (819)
+.+|+++++|+||+.|++.||+++++++..+
T Consensus 652 ~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 652 DLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877
No 21
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-68 Score=577.32 Aligned_cols=491 Identities=23% Similarity=0.360 Sum_probs=413.2
Q ss_pred hcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcc
Q 003452 98 FGGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLK 177 (819)
Q Consensus 98 ~ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~ 177 (819)
-+.++.+-+.|..+.+ ||+++| +++|++.||.|++.+++...|.+|+ .-+.+|.-+..-.+|+....+. ...|.+
T Consensus 20 ~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~La-ng~~~~ 94 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLA-NGGGRP 94 (942)
T ss_pred cCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHh-cCCCCC
Confidence 4578888888876644 999988 9999999999999988777666664 5566777777777777765443 124555
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEE
Q 003452 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFL 257 (819)
Q Consensus 178 ~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll 257 (819)
..|.|.+.|...++++..++.+++|+.....++|.+-.. .++.|+|||+|.++.+++||||||+.++.||+|||||+++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 679999999999999999999999999999999986544 3789999999999999999999999999999999999999
Q ss_pred eccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhh
Q 003452 258 DGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSS 337 (819)
Q Consensus 258 ~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 337 (819)
+|.-|+||+|+|||||.||.|. .|+.+||||+|.+|++.|+|++||.+|..||-++++.. .+....+|+-++.+..+
T Consensus 174 ~gD~LkiDQSAlTGESLpvtKh--~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGESLPVTKH--PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred cCCccccchhhhcCCccccccC--CCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 9999999999999999999999 48889999999999999999999999999999999976 77788999999998887
Q ss_pred HhHHHHHHHHHHHHHHh---------------------------------------------------------------
Q 003452 338 TGKIGLAVAFLVLAVLL--------------------------------------------------------------- 354 (819)
Q Consensus 338 ~~~~~l~~a~l~~~v~~--------------------------------------------------------------- 354 (819)
......+--++.+++.+
T Consensus 251 ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVL 330 (942)
T KOG0205|consen 251 CICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 330 (942)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEE
Confidence 65433222222222211
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 331 CSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Kr 410 (942)
T KOG0205|consen 331 CSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKR 410 (942)
T ss_pred eecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccc
Confidence
Q ss_pred -----ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh
Q 003452 355 -----KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD 429 (819)
Q Consensus 355 -----~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~ 429 (819)
.+++|+.+...|||||.+++.|.. +.+.++++.+.+++||++|+|.+++|++..+++.
T Consensus 411 ta~ty~d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~------ 473 (942)
T KOG0205|consen 411 TALTYIDPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT------ 473 (942)
T ss_pred eEEEEECCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc------
Confidence 356777778899999999999975 3556888999999999999999999999987642
Q ss_pred hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccc-cc
Q 003452 430 QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEF-RN 508 (819)
Q Consensus 430 ~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~-~~ 508 (819)
.+.......++|+.-+-||+|.+..++|++....|++|.|+|||...-++..++++|+-....+ ...+-|.+- .+
T Consensus 474 -~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp---ss~llG~~~~~~ 549 (942)
T KOG0205|consen 474 -KESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---SSALLGLGKDGS 549 (942)
T ss_pred -ccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC---chhhccCCCCCC
Confidence 2233456789999999999999999999999999999999999999999999999998764211 111222211 12
Q ss_pred CCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 509 YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 509 ~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+...+..+.+++..=||.+.|++|.++|+.||++||.|+|+|||+||+||||.||+|||+. .+||.|+.+||+|+....
T Consensus 550 ~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepg 628 (942)
T KOG0205|consen 550 MPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPG 628 (942)
T ss_pred CCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCC
Confidence 3334556677777789999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVA 619 (819)
Q Consensus 589 f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~ 619 (819)
++.+..++..+|.+|++++.+..|.+...+-
T Consensus 629 lSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred chhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 9999999999999999999998887765543
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.5e-66 Score=605.23 Aligned_cols=407 Identities=25% Similarity=0.382 Sum_probs=339.4
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhcc--c---CcccchhhH---HHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcc
Q 003452 148 VDALKDLTILILLGCAVLSLAFGIKE--H---GLKEGWYEG---GSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQ 219 (819)
Q Consensus 148 ~~~~~~~~~~il~v~a~~s~~~g~~~--~---g~~~~~~~~---~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~ 219 (819)
..+|+||++++|++++++|+++++.. . +...+||++ +.+++.+++..+++++.+++.++++++|.+..++..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 35789999999999999999998642 1 222358875 445555667778899999999999999998876656
Q ss_pred eEEEe-CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCC-CeEeeccccccceE
Q 003452 220 IDVIR-NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQN-PFLFSGTKVADGYA 297 (819)
Q Consensus 220 ~~V~R-dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~-~~l~sGt~v~~G~~ 297 (819)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|+++.. +.+|+||.|.+|.+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 8999999999999999999999999999999999975 999999999999999996321 24999999999999
Q ss_pred EEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH-------------------Hh----
Q 003452 298 RMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV-------------------LL---- 354 (819)
Q Consensus 298 ~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-------------------~~---- 354 (819)
+++|+++|.+|++|||++++++++.++||+|..++.+...+..+.+++.+..+.. .+
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhCchhh
Confidence 9999999999999999999999999999999999988776654433222111110 00
Q ss_pred --------------------------------------ccCCCce-----------------------------------
Q 003452 355 --------------------------------------KKTDNTS----------------------------------- 361 (819)
Q Consensus 355 --------------------------------------~~~~~~~----------------------------------- 361 (819)
.|++|+.
T Consensus 266 g~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~s~hP 345 (675)
T TIGR01497 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLADDTP 345 (675)
T ss_pred hhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCCCCCc
Confidence 2333210
Q ss_pred -------------------------------------------EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHH
Q 003452 362 -------------------------------------------HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQ 398 (819)
Q Consensus 362 -------------------------------------------~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 398 (819)
..+.||++|.+++.|.. +|.. ...++.
T Consensus 346 ~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~----~g~~------~~~~~~ 415 (675)
T TIGR01497 346 EGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEA----NGGH------IPTDLD 415 (675)
T ss_pred HHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHh----cCCC------CcHHHH
Confidence 12344555554444431 1111 113456
Q ss_pred HHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH
Q 003452 399 QIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT 478 (819)
Q Consensus 399 ~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t 478 (819)
+.+++++++|+|++++|+ |.+++|+++++||+|||++++|++|+++|++++|+||||..|
T Consensus 416 ~~~~~~a~~G~r~l~va~--------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~t 475 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCE--------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLT 475 (675)
T ss_pred HHHHHHHhCCCeEEEEEE--------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 677889999999999984 247999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHH
Q 003452 479 AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPA 558 (819)
Q Consensus 479 a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~a 558 (819)
|.++|+++||.+ ++||++|+||.++|+.+|++|+.|+|+|||+||+||
T Consensus 476 a~~iA~~lGI~~--------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapA 523 (675)
T TIGR01497 476 AAAIAAEAGVDD--------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPA 523 (675)
T ss_pred HHHHHHHcCCCE--------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHH
Confidence 999999999965 799999999999999999999999999999999999
Q ss_pred hhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 559 LKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANV 618 (819)
Q Consensus 559 L~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv 618 (819)
|++|||||||| +|+++||++||++++||||++|+++++|||+++.+......|++..++
T Consensus 524 L~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 524 LAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred HHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccH
Confidence 99999999999 999999999999999999999999999999999999999999987655
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-62 Score=545.92 Aligned_cols=656 Identities=20% Similarity=0.248 Sum_probs=488.7
Q ss_pred CCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHH
Q 003452 114 AGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLV 193 (819)
Q Consensus 114 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~ 193 (819)
+|+. ++.+++.-++.||.|.+..+ ..+|.+++.+.-..|++.++.+|..+|..-. .||.++.-+ +..
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDe--------yWYySlFtL---fMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLDE--------YWYYSLFTL---FML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhHH--------HHHHHHHHH---HHH
Confidence 5776 44567777788999999886 7889999999999999999999999997543 799875433 334
Q ss_pred HHHHHhhhhhHHHHHHHHhcccC-CcceEEEeCCEEEEEecCccccCCEEEEec---CCeeccceEEEeccceeEecccc
Q 003452 194 IAVSAGSNFTQNRQFDKFSKVSN-NIQIDVIRNGRRQQISIFEIVVGDVICLKI---GDQVPANGLFLDGHSLQVDESSM 269 (819)
Q Consensus 194 ~~v~~~~~~~~~~~~~~l~~~~~-~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~---Gd~VPaDg~ll~g~~l~VDES~L 269 (819)
+.+++..-+++.+.+.+++++.+ +..+.|+|+++|+.+..+||+|||+|.+.. ...||||.+++.|++ .|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhh
Confidence 55677778888888888888754 458999999999999999999999999977 458999999999998 8999999
Q ss_pred cCCCceeeecCC---------------CCCeEeeccccc-------------cceEEEEEEEeCCcChHHHHHHHhhhcC
Q 003452 270 TGESDHVEVNSS---------------QNPFLFSGTKVA-------------DGYARMLATSVGMNTTWGQMMSQISRDN 321 (819)
Q Consensus 270 TGES~pv~k~~~---------------~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 321 (819)
||||.|..|.+- +.+.+|+||++. +|.+.+.|++||.+|..|++++.+-...
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 999999999752 346899999986 4889999999999999999999987765
Q ss_pred CCCChhHHHHHHHHhhHhHHHHHHHHHHHH-HHh----------------------------------------------
Q 003452 322 SEQTPLQARLNKLTSSTGKIGLAVAFLVLA-VLL---------------------------------------------- 354 (819)
Q Consensus 322 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~-v~~---------------------------------------------- 354 (819)
++-|.-.+. .+ .+..+.+++|++... +|.
T Consensus 387 ervTaNn~E--tf--~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak 462 (1160)
T KOG0209|consen 387 ERVTANNRE--TF--IFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAK 462 (1160)
T ss_pred eeeeeccHH--HH--HHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHH
Confidence 555543322 12 222222233332221 121
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 463 ~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPl 542 (1160)
T KOG0209|consen 463 LGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPL 542 (1160)
T ss_pred hceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChH
Confidence
Q ss_pred -------------------------------------------------ccCC--CceEEEecchHHHHHHhhhhccccc
Q 003452 355 -------------------------------------------------KKTD--NTSHVHWKGAAEMILAMCSSYYDAS 383 (819)
Q Consensus 355 -------------------------------------------------~~~~--~~~~~~~KGa~e~il~~c~~~~~~~ 383 (819)
..+. -++.+.+|||||.+-.+...
T Consensus 543 EKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----- 617 (1160)
T KOG0209|consen 543 EKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----- 617 (1160)
T ss_pred HHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh-----
Confidence 0111 13556678888887766543
Q ss_pred CCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHH
Q 003452 384 GNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQ 462 (819)
Q Consensus 384 g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~ 462 (819)
.+..+.+...+|+++|.||+|++||++..-..+ ....+++.+|+||+|.|++.|.-|+|+|++++|+.++
T Consensus 618 ---------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 618 ---------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred ---------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 345678889999999999999999999742211 1224577899999999999999999999999999999
Q ss_pred hcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------------------------CCccceeccccc
Q 003452 463 YAGVNIKMITGDNVFTAKAIATECGILKPGQD------------------------------------TSTGAVLEGEEF 506 (819)
Q Consensus 463 ~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------------------------------~~~~~vi~g~~~ 506 (819)
+++++++|+||||+.||.++|+++||...... ..+.++++|..+
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 99999999999999999999999999865110 124567788888
Q ss_pred ccCCH-HHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHH---------
Q 003452 507 RNYTH-EERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA--------- 576 (819)
Q Consensus 507 ~~~~~-~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~a--------- 576 (819)
+.+.. +.+++.++++.||||+.|.||..++..|++.|+.++|+|||+||+.|||+||||||+- ++.+.+
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~ 847 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRK 847 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhh
Confidence 77654 4578889999999999999999999999999999999999999999999999999986 222200
Q ss_pred --------------------------------------------------------------HhhcCEEEeCCChhHHHH
Q 003452 577 --------------------------------------------------------------KESSDIVILDDNFASVAR 594 (819)
Q Consensus 577 --------------------------------------------------------------k~aaDivl~dd~f~~i~~ 594 (819)
.-||.+.-.-.+.+++-+
T Consensus 848 ~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~ 927 (1160)
T KOG0209|consen 848 KKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTH 927 (1160)
T ss_pred hccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHH
Confidence 001223333346788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCC
Q 003452 595 VLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRT 674 (819)
Q Consensus 595 ~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~ 674 (819)
+|+.||++..+.-|.+.. +..|...... ..+.++.-..-++..|...-.+++. ...+.+...+|-+++.+.+| .
T Consensus 928 IIrQGRctLVtTlQMfKI-LALN~LisAY-slSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP---~ 1001 (1160)
T KOG0209|consen 928 IIRQGRCTLVTTLQMFKI-LALNCLISAY-SLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERP---L 1001 (1160)
T ss_pred HHHhcchhHHHHHHHHHH-HHHHHHHHHH-HHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCC---C
Confidence 999999999988877654 3445543322 2334455556677777766555543 34667788899999999888 4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhhccc----c------CCcchhhhHHHHHHHHHHHHHHHHhhhccccccccc
Q 003452 675 EPLITNIMWRNLVAQALYQRAVLLTLQFRGESI----F------GVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE 744 (819)
Q Consensus 675 ~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~----~------~~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~ 744 (819)
.++++.....++++|-..+++.++++.-..... . ..+++..||.+|..-...|+.... -.+.+.+|.+
T Consensus 1002 ~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFA--VNY~G~PF~E 1079 (1160)
T KOG0209|consen 1002 PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFA--VNYQGRPFRE 1079 (1160)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhh--hhccCcchhh
Confidence 468999888888888888888776654222111 1 113778899999888888886532 2234788889
Q ss_pred cccchHHHHHHHHHHHHHHHHHH----HHHhHccccccCChhhHHH----HHHHHHHHHHHHHHHhhccCCCCc
Q 003452 745 GIHKNRLFLGIIGTTIVLQVVMV----EFLKNFADTERLNWGQWSA----CIGFAAASWPIGWLVKCIPVPAKP 810 (819)
Q Consensus 745 ~~~~n~~~~~~i~~~~~~~~~~v----~~~~~~f~~~~l~~~~w~~----~~~~~~~~~~~~~~~k~i~~~~~~ 810 (819)
++..|+.+.+.++++.++.+.++ +-++..|.+.+++-..-.. .++--++++.+..+.+++-...+|
T Consensus 1080 sl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1080 SLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred hhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 99999988888877766555443 3467788898887433222 222223456666666665444333
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-63 Score=563.91 Aligned_cols=487 Identities=23% Similarity=0.342 Sum_probs=375.6
Q ss_pred CCchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhcc------cCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHHH
Q 003452 139 PSKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIKE------HGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQF 208 (819)
Q Consensus 139 ~~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~~------~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~~ 208 (819)
-+++|+.-.|.++++.. ..+..+++..++++++.. .+.+..+||...|++.++.+ -+++....++....+
T Consensus 290 ~G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~al 369 (951)
T KOG0207|consen 290 GGRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEAL 369 (951)
T ss_pred cceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHH
Confidence 46788888888888764 223334444444444321 12244588888888776665 456666666667777
Q ss_pred HHHhcccCCcceEEEeCCE-EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEe
Q 003452 209 DKFSKVSNNIQIDVIRNGR-RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLF 287 (819)
Q Consensus 209 ~~l~~~~~~~~~~V~RdG~-~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~ 287 (819)
.+|.++.+ .++.++.+|+ +.+|+++.|++||+|.|.||++||+||++++|++ .||||++||||.||.|+ .++.|.
T Consensus 370 skLmsl~p-~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk--~gs~Vi 445 (951)
T KOG0207|consen 370 SKLMSLAP-SKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKK--KGSTVI 445 (951)
T ss_pred HHHhhcCc-ccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccC--CCCeee
Confidence 77777754 4788888886 8999999999999999999999999999999999 99999999999999999 588999
Q ss_pred eccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-------------
Q 003452 288 SGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------- 354 (819)
Q Consensus 288 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------- 354 (819)
+||.+.+|...+.+|++|.+|.+++|.+++++++..++|+|+.+|+++.+++|+.+++++.+|++|.
T Consensus 446 aGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~ 525 (951)
T KOG0207|consen 446 AGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSF 525 (951)
T ss_pred eeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -------------------------ccCC---------CceEEEecchH-HHHHHhhh-hcccccCCccc----------
Q 003452 355 -------------------------KKTD---------NTSHVHWKGAA-EMILAMCS-SYYDASGNIKY---------- 388 (819)
Q Consensus 355 -------------------------~~~~---------~~~~~~~KGa~-e~il~~c~-~~~~~~g~~~~---------- 388 (819)
..|+ -+..++.||+. -+.+..|+ ..|||+|+++.
T Consensus 526 ~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~ 605 (951)
T KOG0207|consen 526 FDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS 605 (951)
T ss_pred hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEe
Confidence 0010 11235678764 23344443 45899998762
Q ss_pred CCH-HHHHHHHHHHHHhhhCCceeeeeec-------------------ccCCccc-----------ccchhhh-------
Q 003452 389 LDD-NEKERFQQIIQGMASSSLRCIAFAH-------------------KQVPEEE-----------HRNEKDQ------- 430 (819)
Q Consensus 389 l~~-~~~~~~~~~i~~~a~~glr~l~~a~-------------------~~~~~~~-----------~~~~~~~------- 430 (819)
+.+ -.+.++...+..+.+..-|+++-|. ...+.++ ...++..
T Consensus 606 ~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~ 685 (951)
T KOG0207|consen 606 LSNPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGC 685 (951)
T ss_pred cCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCC
Confidence 222 1122333333333333333333221 1111111 0000000
Q ss_pred --h-----------------hhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 431 --K-----------------KLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 431 --~-----------------~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
. -...-|.++.|++.++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++||..
T Consensus 686 ~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~- 764 (951)
T KOG0207|consen 686 SIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN- 764 (951)
T ss_pred CCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-
Confidence 0 01123667999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCC
Q 003452 492 GQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQ 571 (819)
Q Consensus 492 ~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~ 571 (819)
|+|...|+||.+.|+.+|++++.|+|+|||+||+|||.+|||||+|| .
T Consensus 765 -------------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~ 812 (951)
T KOG0207|consen 765 -------------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-A 812 (951)
T ss_pred -------------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-c
Confidence 99999999999999999999999999999999999999999999999 8
Q ss_pred ChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCchhHHHHHHHHhhhh
Q 003452 572 GTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG--EIPLTAVQLLWVNLIMD 649 (819)
Q Consensus 572 gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~--~~pl~~~qll~vnli~d 649 (819)
|+++|.|+||+||+.||+..++.+++.+|++.++|+.|+.|+++||+++++++....+..+ -.|.-+.-.+..+.+-.
T Consensus 813 gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsV 892 (951)
T KOG0207|consen 813 GSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSV 892 (951)
T ss_pred ccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHH
Confidence 8999999999999999999999999999999999999999999999999998776554333 23434444444555444
Q ss_pred hHhHhhhc-ccCCc
Q 003452 650 TLGALALA-TEKPT 662 (819)
Q Consensus 650 ~l~alal~-~e~p~ 662 (819)
.+.++.|- ..+|+
T Consensus 893 v~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 893 VLSSLLLKRYKKPT 906 (951)
T ss_pred hhhHHHHhhccccc
Confidence 44455443 34554
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.2e-60 Score=567.49 Aligned_cols=439 Identities=24% Similarity=0.332 Sum_probs=344.3
Q ss_pred CchHHHHHHHHHhhh----HHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhccc
Q 003452 140 SKSLFYFVVDALKDL----TILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVS 215 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~----~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~ 215 (819)
..+|++..|+.++.. +-.+..++++.++++| .|.+++.+++++++...++.+.+++.++..++|.++.
T Consensus 170 ~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~ 241 (741)
T PRK11033 170 LYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALV 241 (741)
T ss_pred HHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457788888887642 2334445666666665 4778777777777777788888888888888888875
Q ss_pred CCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccc
Q 003452 216 NNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADG 295 (819)
Q Consensus 216 ~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G 295 (819)
+ ..++|+|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.||+|+ .|+.||+||.+.+|
T Consensus 242 p-~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~--~Gd~V~aGt~~~~G 317 (741)
T PRK11033 242 P-ETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERA--TGEKVPAGATSVDR 317 (741)
T ss_pred C-CEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecC--CCCeeccCCEEcCc
Confidence 4 47899999999999999999999999999999999999999987 99999999999999999 48899999999999
Q ss_pred eEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh---------------------
Q 003452 296 YARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL--------------------- 354 (819)
Q Consensus 296 ~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~--------------------- 354 (819)
.++++|+++|.+|++|||.+++++++.+++|+|+.+|+++++++++++++++++|++|.
T Consensus 318 ~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlvia 397 (741)
T PRK11033 318 LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIG 397 (741)
T ss_pred eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999887651
Q ss_pred ------------------ccCCCceEEEecch-H-HHHHHhhhhcccccCCccc-------------CCHHHHHH-----
Q 003452 355 ------------------KKTDNTSHVHWKGA-A-EMILAMCSSYYDASGNIKY-------------LDDNEKER----- 396 (819)
Q Consensus 355 ------------------~~~~~~~~~~~KGa-~-e~il~~c~~~~~~~g~~~~-------------l~~~~~~~----- 396 (819)
.... ..++.|+. . |.+-+.-.-++||+|+++. ++++..-.
T Consensus 398 cPcaL~latP~a~~~~l~~aar--~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~ 475 (741)
T PRK11033 398 CPCALVISTPAAITSGLAAAAR--RGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAV 475 (741)
T ss_pred chhhhhhhhHHHHHHHHHHHHH--CCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHHHH
Confidence 0001 11334432 2 3333333345778777651 11211111
Q ss_pred -------HHHHHHHhh-hCCc--------eee-eeeccc-CCccccc---------chh--h----h-------hhhccc
Q 003452 397 -------FQQIIQGMA-SSSL--------RCI-AFAHKQ-VPEEEHR---------NEK--D----Q-------KKLIED 436 (819)
Q Consensus 397 -------~~~~i~~~a-~~gl--------r~l-~~a~~~-~~~~~~~---------~~~--~----~-------~~~~e~ 436 (819)
+.+.+.+++ .++. +.+ +.+.+. .++.... ... . . ...+..
T Consensus 476 e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~ 555 (741)
T PRK11033 476 EQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESAGKTVVLVLR 555 (741)
T ss_pred hcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEE
Confidence 111111111 1111 110 000000 0000000 000 0 0 011234
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
|.+++|+++++|++|||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 556 ~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------- 608 (741)
T PRK11033 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------- 608 (741)
T ss_pred CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------
Confidence 77899999999999999999999999999999999999999999999999995
Q ss_pred HhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 517 KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 517 ~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.+++.+|+||..+|+.+++. +.|+|+|||.||+|||++|||||+|| +++++++++||++++++++..+.+++
T Consensus 609 ------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 609 ------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred ------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 36788999999999999965 58999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVA 627 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~ 627 (819)
++||++++||++|+.|++.||++.+++++++
T Consensus 681 ~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 681 ELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998888765
No 26
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.9e-58 Score=533.14 Aligned_cols=428 Identities=26% Similarity=0.382 Sum_probs=340.4
Q ss_pred HHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCcc
Q 003452 157 LILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEI 236 (819)
Q Consensus 157 ~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~L 236 (819)
.++.+++++++++| .|+|+..|++++++..+++.+.+++.++..++|.+..+ .+++|+|||++++|++++|
T Consensus 3 ~l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~-~~~~v~r~g~~~~i~~~~l 73 (536)
T TIGR01512 3 LLMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAP-DTARVLRGGSLEEVAVEEL 73 (536)
T ss_pred HHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCEEEEEEHHHC
Confidence 34567777777777 69999888888877888888888888888888887644 5799999999999999999
Q ss_pred ccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHH
Q 003452 237 VVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQ 316 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~ 316 (819)
+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|+ .++.+|+||.+.+|+++++|+++|.+|++||+.++
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~ 150 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKA--PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNL 150 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeC--CCCEEEeeeEECCceEEEEEEEeccccHHHHHHHH
Confidence 9999999999999999999999987 99999999999999999 48899999999999999999999999999999999
Q ss_pred hhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHhccCC------------------C-----------------ce
Q 003452 317 ISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKKTD------------------N-----------------TS 361 (819)
Q Consensus 317 ~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~------------------~-----------------~~ 361 (819)
+.+.+.+++|+|+.+++++.+++++.+++++++++++..... + +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 151 VEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 998888999999999999999999999888888776541000 0 01
Q ss_pred EEEecchH--HHHHHhhhhcccccCCcccCCHH----HHHHHHHHHHHhhhCCceeeeeecc-------------cC---
Q 003452 362 HVHWKGAA--EMILAMCSSYYDASGNIKYLDDN----EKERFQQIIQGMASSSLRCIAFAHK-------------QV--- 419 (819)
Q Consensus 362 ~~~~KGa~--e~il~~c~~~~~~~g~~~~l~~~----~~~~~~~~i~~~a~~glr~l~~a~~-------------~~--- 419 (819)
.+++|+.. |.+-....-++||+|+++.-..+ ...++............++++.|.. .+
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~~~~~g~ 310 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAIVDYARKRENVESVEEVPGE 310 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCcceEEecCC
Confidence 12333221 22222223346777776521100 0001111100111111111111100 00
Q ss_pred ------Ccccccchh----------------hhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cEEEEcCCCH
Q 003452 420 ------PEEEHRNEK----------------DQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NIKMITGDNV 476 (819)
Q Consensus 420 ------~~~~~~~~~----------------~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v~mlTGD~~ 476 (819)
.+.....+. .....+..|..++|.+.++|++||+++++|++|+++|+ ++.|+|||+.
T Consensus 311 gi~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~ 390 (536)
T TIGR01512 311 GVRAVVDGGEVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRR 390 (536)
T ss_pred eEEEEECCeEEEEcCHHHHhhcCCcchhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCH
Confidence 000000000 00112456789999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCH
Q 003452 477 FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDA 556 (819)
Q Consensus 477 ~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~ 556 (819)
.++..+++++|+.. +|++..|++|.++++.++++++.|+|+|||.||+
T Consensus 391 ~~a~~i~~~lgi~~--------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~ 438 (536)
T TIGR01512 391 AVAERVARELGIDE--------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDA 438 (536)
T ss_pred HHHHHHHHHcCChh--------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 99999999999965 6889999999999999999999999999999999
Q ss_pred HHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 557 PALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAA 628 (819)
Q Consensus 557 ~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~ 628 (819)
+|+++||+|++||.++++.++++||++++++++..+.+++++||++++|+++|+.|++.||++.+++++.+.
T Consensus 439 ~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 439 PALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV 510 (536)
T ss_pred HHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999966899999999999999999999999999999999999999999999999999888764
No 27
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=2e-57 Score=530.50 Aligned_cols=450 Identities=24% Similarity=0.371 Sum_probs=346.8
Q ss_pred CchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhcc--------cCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHH
Q 003452 140 SKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIKE--------HGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQ 207 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~~--------~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~ 207 (819)
..+|++-.|++++... -.+..++.+.+++++.+. .+..++||+++++++++++. -+++....++.++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577788888776432 233344444445544321 11224688988887766655 46676766777777
Q ss_pred HHHHhcccCCcceEEEeC-CEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeE
Q 003452 208 FDKFSKVSNNIQIDVIRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFL 286 (819)
Q Consensus 208 ~~~l~~~~~~~~~~V~Rd-G~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l 286 (819)
.++|.+..+ .+++++|+ |++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|. .++.|
T Consensus 82 ~~~L~~~~p-~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~--~gd~V 157 (562)
T TIGR01511 82 LSKLAKLQP-STATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKK--VGDPV 157 (562)
T ss_pred HHHHHhcCC-CEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcC--CCCEE
Confidence 777777643 47888875 777999999999999999999999999999999998 99999999999999999 48999
Q ss_pred eeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------
Q 003452 287 FSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------ 354 (819)
Q Consensus 287 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------ 354 (819)
|+||.|.+|+++++|+++|.+|.+|||.+++++++.+++|+|+.+++++++++++.+++|++++++|.
T Consensus 158 ~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~svlvv 237 (562)
T TIGR01511 158 IAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLFALEFAVTVLII 237 (562)
T ss_pred EeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888877653
Q ss_pred -------------------ccCCCceEEEecchH--HHHHHhhhhcccccCCccc----------CCHHHHHHHHHHHHH
Q 003452 355 -------------------KKTDNTSHVHWKGAA--EMILAMCSSYYDASGNIKY----------LDDNEKERFQQIIQG 403 (819)
Q Consensus 355 -------------------~~~~~~~~~~~KGa~--e~il~~c~~~~~~~g~~~~----------l~~~~~~~~~~~i~~ 403 (819)
.....+ +++|+.. |.+-..-.-++||+|+++. .++...+++......
T Consensus 238 acPcaL~la~p~a~~~~~~~aa~~g--Ilik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l~~aa~ 315 (562)
T TIGR01511 238 ACPCALGLATPTVIAVATGLAAKNG--VLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDRTELLALAAA 315 (562)
T ss_pred hccchhhhHHHHHHHHHHHHHHHCC--eEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCHHHHHHHHHH
Confidence 011111 3445432 3333333345788887652 111111122222222
Q ss_pred hhhCCceeeeeecc-----------------cCCccc---------ccch-------------h-h----hhhhcccCcE
Q 003452 404 MASSSLRCIAFAHK-----------------QVPEEE---------HRNE-------------K-D----QKKLIEDNLT 439 (819)
Q Consensus 404 ~a~~glr~l~~a~~-----------------~~~~~~---------~~~~-------------~-~----~~~~~e~~l~ 439 (819)
+.....++++-|.. .++..+ ...+ . . ....+..|.+
T Consensus 316 ~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 395 (562)
T TIGR01511 316 LEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKIDGKAEQGSTSVLVAVNGE 395 (562)
T ss_pred HhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCChhhhCCCEEEEEEECCE
Confidence 22222233222110 000000 0000 0 0 0012345789
Q ss_pred EEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhh
Q 003452 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVD 519 (819)
Q Consensus 440 ~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 519 (819)
++|.+.++|++||+++++|++|++.|+++.|+|||+..++..+++++||.
T Consensus 396 ~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------ 445 (562)
T TIGR01511 396 LAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------ 445 (562)
T ss_pred EEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------
Confidence 99999999999999999999999999999999999999999999999993
Q ss_pred hhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 520 KICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 520 ~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
++++..|++|.++++.++++++.|+|+|||.||+||+++||+||+|| .+++.++++||++++++++..+.+++++|
T Consensus 446 ---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~ls 521 (562)
T TIGR01511 446 ---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLS 521 (562)
T ss_pred ---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHH
Confidence 57888999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 600 RCVHTNIQKLIQFQLTANVAALLINFVAAV 629 (819)
Q Consensus 600 R~~~~ni~k~i~f~l~~nv~~i~~~~~~~~ 629 (819)
|+++++|++|+.|+++||++.+++++.+.+
T Consensus 522 r~~~~~i~qn~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 522 RKTLRRIKQNLLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999888776543
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.4e-56 Score=522.67 Aligned_cols=423 Identities=27% Similarity=0.418 Sum_probs=339.8
Q ss_pred HHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCC-EEEEEecCcc
Q 003452 158 ILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNG-RRQQISIFEI 236 (819)
Q Consensus 158 il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG-~~~~i~~~~L 236 (819)
+..+++++++++| .|.++..+++++++..+++...+++.++..++|.+.. +..++|+||| ++++|+.++|
T Consensus 4 l~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~-~~~~~v~r~~g~~~~i~~~~l 74 (556)
T TIGR01525 4 LMALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALA-PSTARVLQGDGSEEEVPVEEL 74 (556)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEECCCeEEEEEHHHC
Confidence 4456666777777 5888888888888888888888888888888887764 3479999995 9999999999
Q ss_pred ccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHH
Q 003452 237 VVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQ 316 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~ 316 (819)
+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|++|++.+.
T Consensus 75 ~~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~ 151 (556)
T TIGR01525 75 QVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKK--EGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKL 151 (556)
T ss_pred CCCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecC--CcCEEeeceEECCceEEEEEEEecccCHHHHHHHH
Confidence 9999999999999999999999987 99999999999999999 48999999999999999999999999999999999
Q ss_pred hhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------------------------------------
Q 003452 317 ISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------------ 354 (819)
Q Consensus 317 ~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------------ 354 (819)
+.+...+++|+|+.+++++.+++++++++++++|++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~g 231 (556)
T TIGR01525 152 VEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRG 231 (556)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCC
Confidence 99988999999999999999999999999888888762
Q ss_pred -------------------ccCCCce-----E---EEe-cch---HHHHHHhhhhcccccCCcccCCHHH----------
Q 003452 355 -------------------KKTDNTS-----H---VHW-KGA---AEMILAMCSSYYDASGNIKYLDDNE---------- 393 (819)
Q Consensus 355 -------------------~~~~~~~-----~---~~~-KGa---~e~il~~c~~~~~~~g~~~~l~~~~---------- 393 (819)
.+++|+. . ++. .+. .+.++..|.... ....||++.+.
T Consensus 232 ilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e--~~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 232 ILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALE--QSSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHh--ccCCChHHHHHHHHHHhcCCC
Confidence 4566541 1 121 121 566666554221 11122211100
Q ss_pred -HHHHHHHHHHhhhCCceee-------eeecccC---Cccccc-c--hhh-------hhhhcccCcEEEEEEEeeCCCCc
Q 003452 394 -KERFQQIIQGMASSSLRCI-------AFAHKQV---PEEEHR-N--EKD-------QKKLIEDNLTLLGLVGIKDPCRP 452 (819)
Q Consensus 394 -~~~~~~~i~~~a~~glr~l-------~~a~~~~---~~~~~~-~--~~~-------~~~~~e~~l~~lG~v~i~D~lr~ 452 (819)
...+ ..+.....|.+.. .++..++ ...... . ... ..-....|.+++|.+.++|++||
T Consensus 310 ~~~~~--~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~ 387 (556)
T TIGR01525 310 LPKQE--DVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRP 387 (556)
T ss_pred ccccc--CeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchH
Confidence 0000 1112223333221 1221111 000000 0 000 00123457799999999999999
Q ss_pred cHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhh
Q 003452 453 GVKKAVEDCQYAG-VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531 (819)
Q Consensus 453 ~v~~aI~~l~~aG-I~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 531 (819)
|+++++++|+++| +++.|+|||+..++.++++++|+.. +|+++.|++
T Consensus 388 g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~--------------------------------~f~~~~p~~ 435 (556)
T TIGR01525 388 EAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--------------------------------VHAELLPED 435 (556)
T ss_pred hHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe--------------------------------eeccCCHHH
Confidence 9999999999999 9999999999999999999999964 789999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHH
Q 003452 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQ 611 (819)
Q Consensus 532 K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~ 611 (819)
|.++++.+++.++.|+|+|||.||++|+++||+|++|| ++++.+++.||+++.++++..+.+++++||++++||++|+.
T Consensus 436 K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~ 514 (556)
T TIGR01525 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLA 514 (556)
T ss_pred HHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003452 612 FQLTANVAALLINFVAAV 629 (819)
Q Consensus 612 f~l~~nv~~i~~~~~~~~ 629 (819)
|+++||++.+++++.+.+
T Consensus 515 ~a~~~N~~~i~~a~~g~~ 532 (556)
T TIGR01525 515 WALGYNLVAIPLAAGGLL 532 (556)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999988876653
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=6.7e-56 Score=541.05 Aligned_cols=449 Identities=21% Similarity=0.322 Sum_probs=338.7
Q ss_pred CchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhc--------ccCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHH
Q 003452 140 SKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIK--------EHGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQ 207 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~--------~~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~ 207 (819)
..+|++-.|++++... ..+..+++..+++++++ ..+..+.|||.++++++++++ -+++.....+..+.
T Consensus 234 g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~ 313 (834)
T PRK10671 234 GGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKA 313 (834)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777776432 33334444444444431 111113488876666554444 56666666666677
Q ss_pred HHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEe
Q 003452 208 FDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLF 287 (819)
Q Consensus 208 ~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~ 287 (819)
.++|.++.+ ..++|+|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|. .|+.||
T Consensus 314 ~~~L~~l~p-~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs~pv~k~--~gd~V~ 389 (834)
T PRK10671 314 LEKLLDLTP-PTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEPIPQQKG--EGDSVH 389 (834)
T ss_pred HHHHhccCC-CEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCCCCEecC--CCCEEE
Confidence 777777643 57899999999999999999999999999999999999999986 99999999999999999 489999
Q ss_pred eccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHhccCC---------
Q 003452 288 SGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKKTD--------- 358 (819)
Q Consensus 288 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~--------- 358 (819)
+||.|.+|.++++|+++|.+|.+|||.+++++++..++|+|+.+++++.+++++.++++++++++|.....
T Consensus 390 aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~ 469 (834)
T PRK10671 390 AGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLV 469 (834)
T ss_pred ecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888887765531000
Q ss_pred -----------------------------CceEEEecchH--HHHHHhhhhcccccCCccc-------------CCHHHH
Q 003452 359 -----------------------------NTSHVHWKGAA--EMILAMCSSYYDASGNIKY-------------LDDNEK 394 (819)
Q Consensus 359 -----------------------------~~~~~~~KGa~--e~il~~c~~~~~~~g~~~~-------------l~~~~~ 394 (819)
.+..+++||.. |.+-+.-.-++||+|+++. +++.+.
T Consensus 470 ~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~ 549 (834)
T PRK10671 470 IATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQA 549 (834)
T ss_pred HHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHH
Confidence 00113344422 2222222234677776641 111111
Q ss_pred HH------------HHHHHHHhhh---------------CCceee------eeeccc-CCcccccchh-----hh-----
Q 003452 395 ER------------FQQIIQGMAS---------------SSLRCI------AFAHKQ-VPEEEHRNEK-----DQ----- 430 (819)
Q Consensus 395 ~~------------~~~~i~~~a~---------------~glr~l------~~a~~~-~~~~~~~~~~-----~~----- 430 (819)
.. +.+.+-+++. .|.+.. .++..+ +...+..... ..
T Consensus 550 l~~a~~~e~~s~hp~a~Ai~~~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g 629 (834)
T PRK10671 550 LRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQG 629 (834)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCC
Confidence 11 0111111111 111110 000000 0000000000 00
Q ss_pred --hhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccccc
Q 003452 431 --KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRN 508 (819)
Q Consensus 431 --~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~ 508 (819)
...+..|..++|++++.|++||+++++|++|++.|+++.|+|||+..++.++++++||..
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------ 691 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------ 691 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------
Confidence 011234778999999999999999999999999999999999999999999999999964
Q ss_pred CCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 509 YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 509 ~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
++++..|++|.+.++.++++++.|+|+|||.||+||++.||+||+|| ++++.++++||+++++++
T Consensus 692 --------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~ 756 (834)
T PRK10671 692 --------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHS 756 (834)
T ss_pred --------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCC
Confidence 78999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINF 625 (819)
Q Consensus 589 f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~ 625 (819)
+..|.+++++||+++.+|++|+.|++.||++++.+++
T Consensus 757 ~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 757 LMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988776
No 30
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-57 Score=494.09 Aligned_cols=664 Identities=23% Similarity=0.318 Sum_probs=464.6
Q ss_pred HHHhcCCCccCCCCCc--hH-HHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhh
Q 003452 126 RHEAFSSNTYKKPPSK--SL-FYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNF 202 (819)
Q Consensus 126 r~~~~G~N~~~~~~~~--~~-~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~ 202 (819)
++++|-+|.+...+-+ +| ...++++|+...+..+++.+...+.-.+. .|....|+-..+.++ .+..+-+++.++
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~-ig~l~ty~~pl~fvl--~itl~keavdd~ 151 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALK-IGYLSTYWGPLGFVL--TITLIKEAVDDL 151 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhe-ecchhhhhHHHHHHH--HHHHHHHHHHHH
Confidence 4567788877654332 33 45667888888877776666655543322 222222222222222 122334566666
Q ss_pred hHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe-----ccceeEecccccCCCceee
Q 003452 203 TQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD-----GHSLQVDESSMTGESDHVE 277 (819)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~-----g~~l~VDES~LTGES~pv~ 277 (819)
++.+.-+.+++++ .-...|+|...+ +++++++||+|.++.+++||||.++++ |++ .+-+--|.||++...
T Consensus 152 ~r~~rd~~~Nse~---y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~-FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 152 KRRRRDRELNSEK---YTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSC-FIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHhhhhhhhhh---heeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCce-EEeccccCCccccee
Confidence 6555544444432 223447887665 999999999999999999999999995 444 789999999997655
Q ss_pred ecCC---------------------------------------------CCCeEeeccccccceEEEEEEEeCCcChHHH
Q 003452 278 VNSS---------------------------------------------QNPFLFSGTKVADGYARMLATSVGMNTTWGQ 312 (819)
Q Consensus 278 k~~~---------------------------------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~ 312 (819)
|-+- -.|.++++|.|.+|.+.+.|+.||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 4320 24689999999999999999999999963
Q ss_pred HHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH----------------Hh----------------------
Q 003452 313 MMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV----------------LL---------------------- 354 (819)
Q Consensus 313 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v----------------~~---------------------- 354 (819)
.|. -..++.+-.-++..+|.+++.+....++++++.... ++
T Consensus 305 vMN-ts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~ 383 (1051)
T KOG0210|consen 305 VMN-TSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQ 383 (1051)
T ss_pred Hhc-cCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhh
Confidence 233 335566667788899999999988888877765332 11
Q ss_pred ----------------------------ccCCCc----------eEE--------------------Ee------cch--
Q 003452 355 ----------------------------KKTDNT----------SHV--------------------HW------KGA-- 368 (819)
Q Consensus 355 ----------------------------~~~~~~----------~~~--------------------~~------KGa-- 368 (819)
.+++|+ +++ +. ||+
T Consensus 384 i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~ 463 (1051)
T KOG0210|consen 384 IEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALS 463 (1051)
T ss_pred cccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccch
Confidence 111111 000 00 000
Q ss_pred ------------HHHHHHhhhhc---ccccCCcc----------------------------------------------
Q 003452 369 ------------AEMILAMCSSY---YDASGNIK---------------------------------------------- 387 (819)
Q Consensus 369 ------------~e~il~~c~~~---~~~~g~~~---------------------------------------------- 387 (819)
.-..++.|.++ ++.+|+..
T Consensus 464 ~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~ 543 (1051)
T KOG0210|consen 464 RVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQ 543 (1051)
T ss_pred hhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEE
Confidence 00123344321 11122110
Q ss_pred --cCCHH--------------------------------HHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh----
Q 003452 388 --YLDDN--------------------------------EKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD---- 429 (819)
Q Consensus 388 --~l~~~--------------------------------~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~---- 429 (819)
|++.+ ...-+++.-.+||++|+|++.+|.|.+++++++..+.
T Consensus 544 vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~ 623 (1051)
T KOG0210|consen 544 VFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNA 623 (1051)
T ss_pred EeccccccceeeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHh
Confidence 11100 0123455667899999999999999998766431110
Q ss_pred ---------------hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003452 430 ---------------QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD 494 (819)
Q Consensus 430 ---------------~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~ 494 (819)
-+...|.|+.++|+.|.||.++++++.+++.||+|||++||+|||..+||..||+..++...+++
T Consensus 624 A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ 703 (1051)
T KOG0210|consen 624 AKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQY 703 (1051)
T ss_pred hhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCce
Confidence 02357899999999999999999999999999999999999999999999999999999887553
Q ss_pred -----------------------CCccceecccccc---cCCHHHHHHHhhhh--ceeccCCHhhHHHHHHHHHhC-CCE
Q 003452 495 -----------------------TSTGAVLEGEEFR---NYTHEERMEKVDKI--CVMARSSPFDKLLMVQCLKQK-GHV 545 (819)
Q Consensus 495 -----------------------~~~~~vi~g~~~~---~~~~~~~~~~~~~~--~v~ar~sP~~K~~iV~~L~~~-g~~ 545 (819)
.+.+++++|+.+. ++.++|+.+....+ .|+|||+|+||+++++.+|++ |..
T Consensus 704 ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~kr 783 (1051)
T KOG0210|consen 704 IHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKR 783 (1051)
T ss_pred EEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCce
Confidence 2567899998875 55678888877665 489999999999999999987 999
Q ss_pred EEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW-GRCVHTNIQKLIQFQLTANVAALLIN 624 (819)
Q Consensus 546 Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~-gR~~~~ni~k~i~f~l~~nv~~i~~~ 624 (819)
||++|||-||+.|+++||+||++-++...+|.-|||+.+. .|+.+.+++.| ||..|++..+.-+|.+-..++...++
T Consensus 784 vc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Q 861 (1051)
T KOG0210|consen 784 VCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQ 861 (1051)
T ss_pred EEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 9999999999999999999999887888899999999998 89999999999 99999999999999999988888888
Q ss_pred HHHHHhcCCCchhHHH---HHHHHhhhhhHhHhhhcccCC--cccccCCCCCC---CCCCcchHHHHHHHHHHHHHHHHH
Q 003452 625 FVAAVYAGEIPLTAVQ---LLWVNLIMDTLGALALATEKP--TKELMDKPPVG---RTEPLITNIMWRNLVAQALYQRAV 696 (819)
Q Consensus 625 ~~~~~~~~~~pl~~~q---ll~vnli~d~l~alal~~e~p--~~~lm~~~P~~---r~~~li~~~~~~~i~~~~~~~~~v 696 (819)
.+++..+.+.|..-.| |.-+..+++.+|.+++..+.- .+..+..|..+ .++..++.+.+..|...++||..+
T Consensus 862 avfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~v 941 (1051)
T KOG0210|consen 862 AVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSV 941 (1051)
T ss_pred HHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccH
Confidence 8887777777776665 445667789999999886642 22223333222 244566777777778889999988
Q ss_pred HHHHHHhhccccCCcchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHHHHHhHcccc
Q 003452 697 LLTLQFRGESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADT 776 (819)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~ 776 (819)
+++..+. +|..+.....++.|.++++..+......- -..+|+.+.+-++++++.++.+.+++.+|..
T Consensus 942 im~g~~~---l~~~ef~~ivaisFtaLi~tELiMVaLtv----------~tw~~~m~vae~lsL~~Yivsl~~l~~yfd~ 1008 (1051)
T KOG0210|consen 942 IMYGALL---LFDTEFIHIVAISFTALILTELIMVALTV----------RTWHWLMVVAELLSLALYIVSLAFLHEYFDR 1008 (1051)
T ss_pred HHHHHHH---HhhhhheEeeeeeeHHHHHHHHHHHhhhh----------hhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 7664321 22222333456677777766654322111 1235666667777888888888899888876
Q ss_pred cc-CChhhHHHHHHHHHHHHHHHHHHhhccCCCCcccchhc
Q 003452 777 ER-LNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816 (819)
Q Consensus 777 ~~-l~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~~~~~~~ 816 (819)
.- ++|.+..-..++.+++++.-++.|.+....+| +.|-|
T Consensus 1009 ~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP-pSYaK 1048 (1051)
T KOG0210|consen 1009 YFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP-PSYAK 1048 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cchhh
Confidence 43 34444334455566677777888888876666 45544
No 31
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.3e-54 Score=503.12 Aligned_cols=388 Identities=34% Similarity=0.526 Sum_probs=315.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcc-cCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecc
Q 003452 189 AVFLVIAVSAGSNFTQNRQFDKFSKV-SNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDES 267 (819)
Q Consensus 189 ~v~l~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES 267 (819)
++++..+++...+++.++..+++.+. .++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|++ .||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEcc
Confidence 34556677888888999999998872 345689999999 9999999999999999999999999999999976 99999
Q ss_pred cccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHH-hhHhHHHHHHH
Q 003452 268 SMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLT-SSTGKIGLAVA 346 (819)
Q Consensus 268 ~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~~~~~~l~~a 346 (819)
+|||||.|+.|.+ ++.+++||.+.+|+++++|+++|.+|..+++...+.++...++|+|+++++++ .++.++.++++
T Consensus 83 ~LTGEs~pv~k~~--g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 83 NLTGESVPVLKTA--GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccCCCCCeeecc--CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999994 78899999999999999999999999999999999888887999999999999 78888777777
Q ss_pred HHHHHHH---------h---------------------------------------------------------ccCCCc
Q 003452 347 FLVLAVL---------L---------------------------------------------------------KKTDNT 360 (819)
Q Consensus 347 ~l~~~v~---------~---------------------------------------------------------~~~~~~ 360 (819)
++++++| + .+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 6665432 1 344442
Q ss_pred e--------EEEe------cchHH--HHHHhhhh----c--ccc------------cCCcccCCHHHH-H---HHHHHHH
Q 003452 361 S--------HVHW------KGAAE--MILAMCSS----Y--YDA------------SGNIKYLDDNEK-E---RFQQIIQ 402 (819)
Q Consensus 361 ~--------~~~~------KGa~e--~il~~c~~----~--~~~------------~g~~~~l~~~~~-~---~~~~~i~ 402 (819)
. .++. -++|. .+++.+.. . ++. ++....-+++.. + .+.+.++
T Consensus 241 LT~~~~~v~~~~~~~~~~~s~hp~~~ai~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~ 320 (499)
T TIGR01494 241 LTKNEMSFKKVSVLGGEYLSGHPDERALVKSAKWKILNVFEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVK 320 (499)
T ss_pred cccCceEEEEEEecCCCcCCCChHHHHHHHHhhhcCcceeccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHH
Confidence 1 0110 11221 11111110 0 000 000000000000 0 1233445
Q ss_pred HhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHH
Q 003452 403 GMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI 482 (819)
Q Consensus 403 ~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~i 482 (819)
.++.+|+|++++|++. +++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+
T Consensus 321 ~~~~~g~~~~~~a~~~--------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~i 380 (499)
T TIGR01494 321 ELAQSGLRVLAVASKE--------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAI 380 (499)
T ss_pred HHHhCCCEEEEEEECC--------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 6778999999888643 68999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC
Q 003452 483 ATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 483 A~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A 562 (819)
|+++|| +++++|+||.++|+.+|+.|+.|+|+|||.||+|||++|
T Consensus 381 a~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~A 425 (499)
T TIGR01494 381 AKELGI-----------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKA 425 (499)
T ss_pred HHHcCc-----------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhC
Confidence 999986 578999999999999999999999999999999999999
Q ss_pred CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHH
Q 003452 563 DIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLL 642 (819)
Q Consensus 563 dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll 642 (819)
||||+|| |+++||++++++++..++.++++||++++++++++.|.+++|++.+++++++.+
T Consensus 426 dvgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~------------- 486 (499)
T TIGR01494 426 DVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV------------- 486 (499)
T ss_pred CCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999997 799999999999999999999999999999999999999999998888776442
Q ss_pred HHHhhhhhHhHhh
Q 003452 643 WVNLIMDTLGALA 655 (819)
Q Consensus 643 ~vnli~d~l~ala 655 (819)
+|+++++.++++
T Consensus 487 -~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 -LNLVPPGLAALA 498 (499)
T ss_pred -HHHHhcchhhhc
Confidence 677777776653
No 32
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-56 Score=535.74 Aligned_cols=554 Identities=21% Similarity=0.314 Sum_probs=447.7
Q ss_pred HHHhcCCCccCCCCCc---hHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhh
Q 003452 126 RHEAFSSNTYKKPPSK---SLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNF 202 (819)
Q Consensus 126 r~~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~ 202 (819)
++..|-.|.+...|-. -+.+++++||+..-++.+++.++++++- +.+. +++-+ ++.++++..++++.|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~----~~~~~---~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF----NPYTT---LVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc----Cccce---eeceeeeehHHHHHHH
Confidence 4557888988764322 3357889999999999999999998765 3322 23322 3444555666777777
Q ss_pred hHHHHHHHHhcccCCcceEEEeCCE-EEEEecCccccCCEEEEecCCeeccceEEEecc----ceeEecccccCCCceee
Q 003452 203 TQNRQFDKFSKVSNNIQIDVIRNGR-RQQISIFEIVVGDVICLKIGDQVPANGLFLDGH----SLQVDESSMTGESDHVE 277 (819)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~V~RdG~-~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~----~l~VDES~LTGES~pv~ 277 (819)
.++....+.++..++.++.|.|++. ..+..+++++|||+|.+..+|.+|||.++++++ .+.|+.+.|.||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 7777777777777777899999644 799999999999999999999999999999654 25899999999998877
Q ss_pred ecCC---------------------------------------------CCCeEeeccccccc-eEEEEEEEeCCcChHH
Q 003452 278 VNSS---------------------------------------------QNPFLFSGTKVADG-YARMLATSVGMNTTWG 311 (819)
Q Consensus 278 k~~~---------------------------------------------~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g 311 (819)
|... ..+.++.|+++.+. .+.+.|+.+|.+|.++
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~ 259 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLM 259 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHH
Confidence 6521 12356777777764 5889999999999654
Q ss_pred HHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-------------------------------------
Q 003452 312 QMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------- 354 (819)
Q Consensus 312 ~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------- 354 (819)
..-.....+++++++.+|.....+..+.+.++++..+...
T Consensus 260 ---~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 260 ---QNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred ---HhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 4445578889999999999877776666555554433211
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence
Q ss_pred ----------------------------------------------------ccCCCceEEEecchHHHHHHhhhhcccc
Q 003452 355 ----------------------------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDA 382 (819)
Q Consensus 355 ----------------------------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~ 382 (819)
+.++|++.++||||+.++.++++.
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~---- 572 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK---- 572 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh----
Confidence 567778899999999999999975
Q ss_pred cCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhh------------------hhhcccCcEEEEEE
Q 003452 383 SGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQ------------------KKLIEDNLTLLGLV 444 (819)
Q Consensus 383 ~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~------------------~~~~e~~l~~lG~v 444 (819)
-....++...+++++||.+|+||||+|||+++++++..+... .+.+|+||+++|..
T Consensus 573 ------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGAT 646 (1151)
T KOG0206|consen 573 ------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGAT 646 (1151)
T ss_pred ------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcce
Confidence 124567777889999999999999999999998876543211 34579999999999
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------------------
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD------------------------------ 494 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------------------------ 494 (819)
++||++++||+++|+.|++||||+||+|||..+||.+||..|++..++..
T Consensus 647 AIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~ 726 (1151)
T KOG0206|consen 647 AIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFT 726 (1151)
T ss_pred eeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999876321
Q ss_pred ------------CCccceecccccccCCHHH----HHHHhhh--hceeccCCHhhHHHHHHHHHhC-CCEEEEEcCCCCC
Q 003452 495 ------------TSTGAVLEGEEFRNYTHEE----RMEKVDK--ICVMARSSPFDKLLMVQCLKQK-GHVVAVTRDGTND 555 (819)
Q Consensus 495 ------------~~~~~vi~g~~~~~~~~~~----~~~~~~~--~~v~ar~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND 555 (819)
...+++++|+.+....+++ +.+.... ..++||+||.||..+|+..++. +.+++++|||+||
T Consensus 727 ~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGAND 806 (1151)
T KOG0206|consen 727 EELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGAND 806 (1151)
T ss_pred HHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCcc
Confidence 1356888888876555443 3333333 3599999999999999999754 8999999999999
Q ss_pred HHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q 003452 556 APALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW-GRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG-- 632 (819)
Q Consensus 556 ~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~-gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~-- 632 (819)
.+|+++|||||++++.+..+|..+||+.+. .|..+.+++.. ||+.|.|+.+++.|.+++|+...++.|++.++.+
T Consensus 807 VsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfS 884 (1151)
T KOG0206|consen 807 VSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFS 884 (1151)
T ss_pred chheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 999999999999998999999999999998 89999999987 9999999999999999999999999999988875
Q ss_pred -CCchhHHHHHHHHhhhhhHhHhhhc---ccCCcccccCCCCCCC---CCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 633 -EIPLTAVQLLWVNLIMDTLGALALA---TEKPTKELMDKPPVGR---TEPLITNIMWRNLVAQALYQRAVLLTLQF 702 (819)
Q Consensus 633 -~~pl~~~qll~vnli~d~l~alal~---~e~p~~~lm~~~P~~r---~~~li~~~~~~~i~~~~~~~~~v~~~l~~ 702 (819)
...+..+++.++|++++.+|.++++ .+.+.+.+|+.|-.++ +..++++..++.++..++||.+++|++.+
T Consensus 885 gq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 885 GQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred CCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 5677889999999999999999986 3456667777765443 44578888888899999999998876544
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-50 Score=428.86 Aligned_cols=402 Identities=26% Similarity=0.376 Sum_probs=296.1
Q ss_pred HHhhhHHHHHHHHHHHHHHHhh----ccc-CcccchhhHHHH--HHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEE
Q 003452 150 ALKDLTILILLGCAVLSLAFGI----KEH-GLKEGWYEGGSI--LVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDV 222 (819)
Q Consensus 150 ~~~~~~~~il~v~a~~s~~~g~----~~~-g~~~~~~~~~~i--~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V 222 (819)
..++|..++..+.++++.++.+ ... +....|+-.+++ ++.+++..+-+++.+-+-+-|.+.|++.+....+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 3456666666666666654333 211 212223222222 223334455677788888888888888776667888
Q ss_pred EeC-CEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCC-CCCeEeeccccccceEEEE
Q 003452 223 IRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS-QNPFLFSGTKVADGYARML 300 (819)
Q Consensus 223 ~Rd-G~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~-~~~~l~sGt~v~~G~~~~~ 300 (819)
+++ |..+.|++.+|+.||+|.++.||+||+||.+++|.+ .||||.+||||-||-|.++ +.+-|-.||.|.+...+++
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 876 899999999999999999999999999999999998 9999999999999999863 1245999999999999999
Q ss_pred EEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHH----------------------HHHHHHHHHh----
Q 003452 301 ATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLA----------------------VAFLVLAVLL---- 354 (819)
Q Consensus 301 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~----------------------~a~l~~~v~~---- 354 (819)
+|+...+|.+.|++.+++.++.+|||-+-.++-+-.-+..+-++ +|+++.++-.
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTIGg 267 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTIGG 267 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcccHHH
Confidence 99999999999999999999999999998877654333222111 1111111000
Q ss_pred ------------------------------------ccCCCceE---------EEecchHH-HHHHhh--hhcccccC--
Q 003452 355 ------------------------------------KKTDNTSH---------VHWKGAAE-MILAMC--SSYYDASG-- 384 (819)
Q Consensus 355 ------------------------------------~~~~~~~~---------~~~KGa~e-~il~~c--~~~~~~~g-- 384 (819)
.+++|++. +-.+|..+ .+.+.| +.++|++-
T Consensus 268 LLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~DeTpEG 347 (681)
T COG2216 268 LLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADETPEG 347 (681)
T ss_pred HHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccCCCCc
Confidence 24455432 22344332 222222 12222111
Q ss_pred -----------------------CcccCCHHHHH--------------------------------HHHHHHHHhhhCCc
Q 003452 385 -----------------------NIKYLDDNEKE--------------------------------RFQQIIQGMASSSL 409 (819)
Q Consensus 385 -----------------------~~~~l~~~~~~--------------------------------~~~~~i~~~a~~gl 409 (819)
+..|++.+.|. .++...++.+..|-
T Consensus 348 rSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GG 427 (681)
T COG2216 348 RSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGG 427 (681)
T ss_pred ccHHHHHHHhccCCCcccccccceeeecceecccccccCCCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence 12233322221 11111122222222
Q ss_pred eeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 410 r~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
.++ .+..|..++|++.++|-+|||.+|-..+||+.||+.+|+||||+.||.+||+|.|++
T Consensus 428 TPL--------------------~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 428 TPL--------------------VVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred Cce--------------------EEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 222 234577899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 490 KPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 490 ~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
+ ..|.++||||.++++.-|.+|+.|||||||+||+|||.+||||+||.
T Consensus 488 d--------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 488 D--------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred h--------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 7 58999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 003452 570 IQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605 (819)
Q Consensus 570 ~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~n 605 (819)
+||..|||++.+|=+|.|...+.++++.|++..-.
T Consensus 536 -sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiT 570 (681)
T COG2216 536 -SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLIT 570 (681)
T ss_pred -cccHHHHHhhcccccCCCccceehHhhhhhhheee
Confidence 99999999999999999999999999999987643
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.95 E-value=4.8e-27 Score=245.52 Aligned_cols=169 Identities=33% Similarity=0.573 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe-ccceeE
Q 003452 186 ILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD-GHSLQV 264 (819)
Q Consensus 186 i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~-g~~l~V 264 (819)
+++++++..+++.+.+++.++..+++++..++..++|+|||++++++++||+|||+|.+++||++||||++++ |.. .|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~-~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA-YV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE-EE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc-cc
Confidence 4555666777888899999999999988766645999999999999999999999999999999999999999 765 99
Q ss_pred ecccccCCCceeeec---CCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHH
Q 003452 265 DESSMTGESDHVEVN---SSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKI 341 (819)
Q Consensus 265 DES~LTGES~pv~k~---~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~ 341 (819)
|||.+|||+.|+.|. ...++++|+||.+.+|.+.++|++||.+|..|++.+.+.+.+.+++++++.+++++.++.++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999998 22489999999999999999999999999999999999888888899999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 003452 342 GLAVAFLVLAVLLK 355 (819)
Q Consensus 342 ~l~~a~l~~~v~~~ 355 (819)
.++++++++++++.
T Consensus 161 ~~~~~~~~~~~~~~ 174 (230)
T PF00122_consen 161 ILAIAILVFIIWFF 174 (230)
T ss_dssp HHHHHHHHHHHCHT
T ss_pred ccccchhhhcccee
Confidence 99999988877654
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.92 E-value=1.3e-24 Score=218.70 Aligned_cols=171 Identities=37% Similarity=0.608 Sum_probs=144.0
Q ss_pred CCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc
Q 003452 633 EIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK 712 (819)
Q Consensus 633 ~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~~ 712 (819)
|.|+++.|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.+++++.++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999998887776666566544
Q ss_pred h-------hhhHHHHHHHHHHHHHHHHhhhcccccccc--ccccchHHHHHHHHHHHHHHHHHHHH--HhHccccccCCh
Q 003452 713 K-------VKETLIFNTFVLCQVFNEFNARKLEKKNVF--EGIHKNRLFLGIIGTTIVLQVVMVEF--LKNFADTERLNW 781 (819)
Q Consensus 713 ~-------~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~--~~~~~n~~~~~~i~~~~~~~~~~v~~--~~~~f~~~~l~~ 781 (819)
. ..+|+.|++++++|++|.+++|+.+ .+.+ +++++|+++++++++++++|+++++. ++.+|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 3 4899999999999999999999954 3444 58889999999999999999888764 899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhc
Q 003452 782 GQWSACIGFAAASWPIGWLVKCI 804 (819)
Q Consensus 782 ~~w~~~~~~~~~~~~~~~~~k~i 804 (819)
.+|+++++++++.+++.++.|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999975
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.89 E-value=2.2e-21 Score=213.49 Aligned_cols=300 Identities=16% Similarity=0.269 Sum_probs=216.1
Q ss_pred chHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcc----------------cc------
Q 003452 367 GAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEE----------------EH------ 424 (819)
Q Consensus 367 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~----------------~~------ 424 (819)
|-.+...+.|+.+|| ...+.|++...+.++++.+....-.| +|+|+|||+..-. +.
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 445667899999997 45678999999999988877766666 5999999875210 00
Q ss_pred -------cchhhh-------------------hhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH
Q 003452 425 -------RNEKDQ-------------------KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT 478 (819)
Q Consensus 425 -------~~~~~~-------------------~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t 478 (819)
++.... ....-.+..|.|++....+.|++....|+.|.++-|+.+.+|-.++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000000 001124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC---------CC------------------------------Cccceecc-------cccccCCH-
Q 003452 479 AKAIATECGILKPGQ---------DT------------------------------STGAVLEG-------EEFRNYTH- 511 (819)
Q Consensus 479 a~~iA~~~GI~~~~~---------~~------------------------------~~~~vi~g-------~~~~~~~~- 511 (819)
.+-.|+++||...=. +. .+...++. ..|+.++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999985310 00 00011100 01111111
Q ss_pred -----------------HHHHHHhhh-------hceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCC--CHHHhhhCCcc
Q 003452 512 -----------------EERMEKVDK-------ICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTN--DAPALKETDIG 565 (819)
Q Consensus 512 -----------------~~~~~~~~~-------~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~N--D~~aL~~AdvG 565 (819)
.+++..+.+ +..|..++|+.-.++++.+|++|++++++|...| ..-.+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 111111111 2378999999999999999999999999999988 45566889999
Q ss_pred eeeCCC------------ChH--HH----------------HhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 566 LSMGIQ------------GTE--VA----------------KESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLT 615 (819)
Q Consensus 566 Iamg~~------------gt~--~a----------------k~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~ 615 (819)
|++..- ++. .| .-++|+.+.....-++.++|..+|.....+|+.+.|.+.
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997510 111 11 112344444445566889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhh-hcccCCcccccCC
Q 003452 616 ANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALA-LATEKPTKELMDK 668 (819)
Q Consensus 616 ~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ala-l~~e~p~~~lm~~ 668 (819)
..+...++.|++.++..+..++..|++|...+...+..+. |-+.+|.+.+|-+
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999999999999999999877766665 5556666666544
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.70 E-value=1.5e-17 Score=171.04 Aligned_cols=97 Identities=46% Similarity=0.717 Sum_probs=91.7
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
+..++|.+.+.|++||+++++|++|+++|++++|+|||+..+|.++|+++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 7899999999999999999999999999999999999999999999999999542
Q ss_pred HhhhhceeccC--CHhhH--HHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC
Q 003452 517 KVDKICVMARS--SPFDK--LLMVQCLKQKGHVVAVTRDGTNDAPALKETD 563 (819)
Q Consensus 517 ~~~~~~v~ar~--sP~~K--~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad 563 (819)
.+++++ +|++| .++++.|+.+++.|+|+|||.||++|+++||
T Consensus 170 -----~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -----IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999977779999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.56 E-value=1.9e-14 Score=130.17 Aligned_cols=126 Identities=23% Similarity=0.267 Sum_probs=108.9
Q ss_pred cEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHH
Q 003452 438 LTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 438 l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
+...+.++---.+=++++++|++|++. ++|.+.|||..-+....|+-.||+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 345667777778889999999999999 999999999999999999999987642
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC--CChHHHHhhcCEEEeCCChhHHHHH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI--QGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~--~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
||+...|+.|..+++.|++.++.|.|+|||.||.+||++||+||..-. ...+-+.++||+++- +...+.++
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 899999999999999999999999999999999999999999987542 244567799999987 55555555
Q ss_pred H
Q 003452 596 L 596 (819)
Q Consensus 596 i 596 (819)
+
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 4
No 39
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.27 E-value=8e-12 Score=104.85 Aligned_cols=66 Identities=26% Similarity=0.435 Sum_probs=63.2
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHH
Q 003452 99 GGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLS 166 (819)
Q Consensus 99 ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s 166 (819)
.+++++++.|+|+..+||++++ +.+|+++||+|.+++++++++|+.++++|+||++++|++++++|
T Consensus 4 ~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 4 LSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4789999999999999999977 99999999999999999999999999999999999999999987
No 40
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.17 E-value=4.7e-11 Score=98.62 Aligned_cols=62 Identities=31% Similarity=0.492 Sum_probs=58.0
Q ss_pred HhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 003452 107 ALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFG 170 (819)
Q Consensus 107 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g 170 (819)
.|+++.+.||++++ +++|+++||+|++++++.+++|+.++++|+||++++|++++++|+++|
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888889999877 999999999999999988999999999999999999999999998875
No 41
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.99 E-value=1.3e-09 Score=112.63 Aligned_cols=146 Identities=22% Similarity=0.282 Sum_probs=101.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc-c--cc-----C-----------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE-F--RN-----Y----------- 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~--~~-----~----------- 509 (819)
.+.+++.++|++|++.|+++.++||++...+..+++++++..+....+++.+....+ . .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999875422222222222110 0 00 0
Q ss_pred -------------------CHHHHHHHhhhh--cee-----cc--CCHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHH
Q 003452 510 -------------------THEERMEKVDKI--CVM-----AR--SSPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAP 557 (819)
Q Consensus 510 -------------------~~~~~~~~~~~~--~v~-----ar--~sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~ 557 (819)
..+++.+.+.+. .+. .. ....+|...++.+.+. | +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 001111111111 111 01 1234788888877654 2 45899999999999
Q ss_pred HhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 558 ALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 558 aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
|++.|++|++|+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777776654
No 42
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.99 E-value=2.6e-09 Score=109.28 Aligned_cols=130 Identities=12% Similarity=0.018 Sum_probs=96.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecc-cccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEG-EEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+...-. ..+.+++ ..+.. . .. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~tG---~----------~~--~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRVVG---Y----------QL--R 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCeeEC---e----------ee--c
Confidence 68999999999999975 999999999999999999999974211 1111211 11000 0 01 3
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
.|+.|...++.+++.|..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 477899999999988878999999999999999999999997 5555556665433334677777777664
No 43
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.95 E-value=3.6e-09 Score=110.46 Aligned_cols=148 Identities=20% Similarity=0.199 Sum_probs=103.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec---cccccc-----------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE---GEEFRN----------------- 508 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~---g~~~~~----------------- 508 (819)
.+.|.+.++|+++++.|+++.+.||++...+..+++++|+..+....+++.+.. ++.+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 377899999999999999999999999999999999999864322222232221 111100
Q ss_pred ------------------------CCHHHHHHHhhhh----ce-----eccCCHh--hHHHHHHHHHhC----CCEEEEE
Q 003452 509 ------------------------YTHEERMEKVDKI----CV-----MARSSPF--DKLLMVQCLKQK----GHVVAVT 549 (819)
Q Consensus 509 ------------------------~~~~~~~~~~~~~----~v-----~ar~sP~--~K~~iV~~L~~~----g~~Va~~ 549 (819)
...++..+.+.+. .+ +....|. +|..-++.+.++ .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0001112222111 11 0112222 477777777554 2468999
Q ss_pred cCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 550 RDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 550 GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
||+.||.+|++.|++|+||+ ++.+.+|+.||+|..+++-.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888888775
No 44
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.93 E-value=5e-09 Score=112.26 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=56.8
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|..-++.|.+. | +.|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+|..+++-.++.++++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666554 2 56889999999999999999999999 999999999999999888888888775
No 45
>PRK10976 putative hydrolase; Provisional
Probab=98.90 E-value=8.5e-09 Score=110.23 Aligned_cols=66 Identities=27% Similarity=0.273 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC--EEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD--IVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD--ivl~dd~f~~i~~~i~ 597 (819)
+|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.|| .|..+++-.++.++++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666544 2 56889999999999999999999999 99999999988 6777888888888775
No 46
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.90 E-value=6.1e-09 Score=113.70 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=98.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec-cC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA-RS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a-r~ 527 (819)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..... +.-.+.+|.--.. +.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~ltg~--------------v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKLTGN--------------VLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEEEeE--------------ecCccC
Confidence 689999999999999999999999999888999999999854110 0000111110000 010 02
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
..+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..++.||.++...++.++..++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 335788888887654 3 5788899999999999999999999 578899999999999889988876653
No 47
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.89 E-value=7.3e-09 Score=111.18 Aligned_cols=148 Identities=16% Similarity=0.150 Sum_probs=100.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec--ccccc--cC---------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE--GEEFR--NY--------------- 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~--g~~~~--~~--------------- 509 (819)
.+.+.+.++|+++++.|+++.+.||++...+..+.+++|+.......+++.+.+ |+.+. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588899999999999999999999999999999999999864311111111110 10000 00
Q ss_pred ----------------------------------------------------CHH---HHHHHhhh-----hcee-----
Q 003452 510 ----------------------------------------------------THE---ERMEKVDK-----ICVM----- 524 (819)
Q Consensus 510 ----------------------------------------------------~~~---~~~~~~~~-----~~v~----- 524 (819)
.++ ++.+.+.+ ..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000 01111110 1110
Q ss_pred -ccCCHh--hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCE--EEeCCChhHHHHH
Q 003452 525 -ARSSPF--DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDI--VILDDNFASVARV 595 (819)
Q Consensus 525 -ar~sP~--~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDi--vl~dd~f~~i~~~ 595 (819)
...+|. .|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|++||. +..+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 112222 577777777655 3 56889999999999999999999999 999999999996 6667788888877
Q ss_pred HH
Q 003452 596 LR 597 (819)
Q Consensus 596 i~ 597 (819)
++
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 75
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.89 E-value=8.3e-09 Score=110.22 Aligned_cols=148 Identities=28% Similarity=0.340 Sum_probs=105.8
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc-c----------------------
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE-F---------------------- 506 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~---------------------- 506 (819)
+.+.+.++|+++++.|+++.++||++...+..+.+++|+..+-...+++.+....+ +
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 88999999999999999999999999999999999999986311111111110000 0
Q ss_pred -------------------------------------c----------cCCH---HHHHHHhhh-----hceeccCCH--
Q 003452 507 -------------------------------------R----------NYTH---EERMEKVDK-----ICVMARSSP-- 529 (819)
Q Consensus 507 -------------------------------------~----------~~~~---~~~~~~~~~-----~~v~ar~sP-- 529 (819)
. .... ++..+.+.+ ...+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0000 111111111 112222222
Q ss_pred -------hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 530 -------FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 530 -------~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.+|..-++.|.++ | +.|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|.++++.
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3788888888774 4 34889999999999999999999999 8999999999988899999999988875
No 49
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.85 E-value=1.2e-08 Score=105.98 Aligned_cols=148 Identities=21% Similarity=0.287 Sum_probs=101.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc----ccc-CC-------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE----FRN-YT------------- 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~----~~~-~~------------- 510 (819)
.+.+.+.++++++++.|+.+.+.||++...+..+++++|+..+....++..+..... +.. +.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999654321112222211110 000 00
Q ss_pred -----------------------HHHHHHHhhhhc----ee-----ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCC
Q 003452 511 -----------------------HEERMEKVDKIC----VM-----ARSSP--FDKLLMVQCLKQK-G---HVVAVTRDG 552 (819)
Q Consensus 511 -----------------------~~~~~~~~~~~~----v~-----ar~sP--~~K~~iV~~L~~~-g---~~Va~~GDG 552 (819)
.+...+...+.. +. ....| .+|...++.+.++ | +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 011111111111 11 11122 3788888877654 3 568999999
Q ss_pred CCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhH----HHHHHH
Q 003452 553 TNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS----VARVLR 597 (819)
Q Consensus 553 ~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~----i~~~i~ 597 (819)
.||.+|++.|++|+||+ ++.+..|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999988777777 665554
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.84 E-value=1.2e-08 Score=105.84 Aligned_cols=129 Identities=18% Similarity=0.269 Sum_probs=94.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc-C
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR-S 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~ 527 (819)
+++|++.+.++.|++.|+++.++||.+...+..+.+.+|+..-.. .....++..+... +.+. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~~~-------------~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLTGL-------------VEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEEEE-------------ecCccc
Confidence 689999999999999999999999999999999999999864210 0000001000000 0111 1
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 528 SPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 528 sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
.+..|..+++.+.++ | +.+.++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 123466666665444 2 35888999999999999999999986 568889999999999999888654
No 51
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.80 E-value=3.7e-08 Score=105.47 Aligned_cols=66 Identities=26% Similarity=0.365 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..|+.||++..+++-.++.++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655443 3 46889999999999999999999999 888999999999999888889988875
No 52
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.80 E-value=1.1e-08 Score=107.24 Aligned_cols=147 Identities=20% Similarity=0.238 Sum_probs=101.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccce-e-cccccc--cCC--------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAV-L-EGEEFR--NYT-------------- 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~v-i-~g~~~~--~~~-------------- 510 (819)
.+.|++.+++++++++|+++.+.||++...+..+.+++++..+....+++.+ . +|+.+. .++
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 4668999999999999999999999999999999999998743211112222 0 011000 000
Q ss_pred -------------------------------------------------------HH-------HHHHHhhhhceecc--
Q 003452 511 -------------------------------------------------------HE-------ERMEKVDKICVMAR-- 526 (819)
Q Consensus 511 -------------------------------------------------------~~-------~~~~~~~~~~v~ar-- 526 (819)
.+ ++.+..+....+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 01 11111111111111
Q ss_pred -----CCH--hhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 527 -----SSP--FDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 527 -----~sP--~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
.+| .+|...++.|.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|..||.+..+.+=.+|.++
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 222 4788888888753 357888999999999999999999999 9999999999999998766888776
Q ss_pred H
Q 003452 596 L 596 (819)
Q Consensus 596 i 596 (819)
+
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
No 53
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.76 E-value=3e-08 Score=98.13 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=81.8
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec--cCCHhhHH
Q 003452 456 KAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA--RSSPFDKL 533 (819)
Q Consensus 456 ~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~sP~~K~ 533 (819)
.+|+.|+++|+++.++|+.+...+..+.+.+|+... |. .-.|+.-.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~--------------------------------f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF--------------------------------HEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE--------------------------------EecCCCCHHHHH
Confidence 589999999999999999999999999999999741 11 12344444
Q ss_pred HHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 534 LMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 534 ~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
.+++.+.-..+.++++||+.||.+|++.|+++++|+ ++.+..|+.|++|...++
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 444544433467999999999999999999999999 899999999999987544
No 54
>PLN02887 hydrolase family protein
Probab=98.74 E-value=7.9e-08 Score=112.27 Aligned_cols=65 Identities=25% Similarity=0.371 Sum_probs=54.3
Q ss_pred HHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 532 KLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 532 K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||+|..+++-.+|.++++
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 44444444433 2 45888899999999999999999999 999999999999998888899988876
No 55
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.71 E-value=7.1e-08 Score=94.39 Aligned_cols=97 Identities=15% Similarity=0.203 Sum_probs=78.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMV 536 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 536 (819)
+|++|++.|+++.++||++...+..+.+++|+... +... ..|...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------~~~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------YQGQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------------------------------Eecc--cchHHHH
Confidence 99999999999999999999999999999998641 1111 2344444
Q ss_pred HHHHh----CCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 537 QCLKQ----KGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 537 ~~L~~----~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+.+.+ ..+.+.|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 44432 3467999999999999999999999999 788889999999997554
No 56
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.65 E-value=2.8e-07 Score=98.08 Aligned_cols=147 Identities=18% Similarity=0.103 Sum_probs=97.0
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc--------c--ccCCHHHHHHHh-
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE--------F--RNYTHEERMEKV- 518 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~--------~--~~~~~~~~~~~~- 518 (819)
..+.+.++|++|+++|+++.++||+....+..+.+++|+..+....+++.+..... + ..+..+...+.+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999999864333333444433211 0 011111110000
Q ss_pred ----------------------------------------------------------hh--hceec-----cCC--Hhh
Q 003452 519 ----------------------------------------------------------DK--ICVMA-----RSS--PFD 531 (819)
Q Consensus 519 ----------------------------------------------------------~~--~~v~a-----r~s--P~~ 531 (819)
.+ +.+.. ... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 00000 001 124
Q ss_pred HHHHHHHHHhC------CCEEEEEcCCCCCHHHhhhCCcceeeCCCCh---HHHHhh--c-CEEEeCCChhHHHHHHH
Q 003452 532 KLLMVQCLKQK------GHVVAVTRDGTNDAPALKETDIGLSMGIQGT---EVAKES--S-DIVILDDNFASVARVLR 597 (819)
Q Consensus 532 K~~iV~~L~~~------g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt---~~ak~a--a-Divl~dd~f~~i~~~i~ 597 (819)
|...++.+.+. .+.+.++||+.||.+||+.|+.|+||+ ++. +..|+. | ++|..+++-.++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 55555555433 456899999999999999999999999 776 468886 4 58888888888888775
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.63 E-value=1.2e-07 Score=100.69 Aligned_cols=64 Identities=30% Similarity=0.285 Sum_probs=55.2
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
+|..-++.+.+. .+.++++||+.||.+|++.|+.|++|+ ++.+..|+.||++..+++-.+|.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 588888777664 256899999999999999999999999 8999999999999988877777654
No 58
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.62 E-value=1.6e-07 Score=96.65 Aligned_cols=116 Identities=22% Similarity=0.302 Sum_probs=86.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC---CccceecccccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT---STGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~---~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+....... .++ +++|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGR------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEece------------------ee
Confidence 789999999999999999999999999999999999999998642110 011 23333 22
Q ss_pred c-cCCHhhHHHHHHHHHhC-CC---EEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEE
Q 003452 525 A-RSSPFDKLLMVQCLKQK-GH---VVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVI 584 (819)
Q Consensus 525 a-r~sP~~K~~iV~~L~~~-g~---~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl 584 (819)
. .+..+.|...++.+.+. |. .+.++|||.||.|||+.|+.+++.. +....+..|+...
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 2 33457888888666553 43 4778899999999999999999997 3333444444433
No 59
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.55 E-value=2.2e-07 Score=93.73 Aligned_cols=111 Identities=17% Similarity=0.185 Sum_probs=85.2
Q ss_pred HHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHH
Q 003452 455 KKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534 (819)
Q Consensus 455 ~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 534 (819)
..+++.|++.|+++.++||.+...+..+++++|+... |.. .++|..
T Consensus 54 ~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------------------------------f~g--~~~k~~ 99 (183)
T PRK09484 54 GYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------------------------------YQG--QSNKLI 99 (183)
T ss_pred hHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------ecC--CCcHHH
Confidence 3699999999999999999999999999999998641 221 134555
Q ss_pred HHHHHHh-C---CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCC----ChhHHHHHHHHHH
Q 003452 535 MVQCLKQ-K---GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDD----NFASVARVLRWGR 600 (819)
Q Consensus 535 iV~~L~~-~---g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd----~f~~i~~~i~~gR 600 (819)
.++.+.+ . .+.++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+ .+..+.+.+...|
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 5544433 3 356999999999999999999999998 78888899999999643 2455555554433
No 60
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.53 E-value=7.7e-07 Score=95.50 Aligned_cols=147 Identities=13% Similarity=0.048 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCccceecccc--------c-c-cCCHHHHHHHh
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK-PGQDTSTGAVLEGEE--------F-R-NYTHEERMEKV 518 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~-~~~~~~~~~vi~g~~--------~-~-~~~~~~~~~~~ 518 (819)
+-+.+.++|++|+++|+++++.||+....+..+++++|+.. +....+++.+..... . . .++.+...+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 44678999999999999999999999999999999999852 222223343432210 0 0 01111100000
Q ss_pred h--------------------------------------h--hceec----------------------------cCCH-
Q 003452 519 D--------------------------------------K--ICVMA----------------------------RSSP- 529 (819)
Q Consensus 519 ~--------------------------------------~--~~v~a----------------------------r~sP- 529 (819)
. . ..+.. ...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 0 0 00011 1111
Q ss_pred -hhHHHHHHHHHh-------CCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh-HH-----HHhhcCEEEeCCChhHHHHH
Q 003452 530 -FDKLLMVQCLKQ-------KGHVVAVTRDGTNDAPALKETDIGLSMGIQGT-EV-----AKESSDIVILDDNFASVARV 595 (819)
Q Consensus 530 -~~K~~iV~~L~~-------~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt-~~-----ak~aaDivl~dd~f~~i~~~ 595 (819)
.+|..-++.|.+ ..+.|+++|||.||.+||+.|++|+||| ++. +. .+..+|++....+-+++.++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 245555555544 2356889999999999999999999999 433 21 34578898888888888877
Q ss_pred HH
Q 003452 596 LR 597 (819)
Q Consensus 596 i~ 597 (819)
++
T Consensus 264 l~ 265 (271)
T PRK03669 264 LD 265 (271)
T ss_pred HH
Confidence 76
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.52 E-value=6.5e-07 Score=91.64 Aligned_cols=127 Identities=16% Similarity=0.166 Sum_probs=91.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec--c
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA--R 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r 526 (819)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-. .....++... +.. .
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~~----------------i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDGM----------------ITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCCe----------------EECccc
Confidence 4689999999999999 9999999999999999999999864210 0111111100 011 1
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
..|+.|...++.++..++.+.|+|||.||.+|.+.|++|+..+ ...+.....++..+. +++..+...+.
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l~ 196 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAID 196 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHHH
Confidence 2467888889999888889999999999999999999999987 444444455665322 26666665554
No 62
>PRK08238 hypothetical protein; Validated
Probab=98.43 E-value=8.1e-05 Score=85.77 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+ .++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDG------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCC------------------ccccC
Confidence 578999999999999999999999999999999999999832 1222111 11355
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
|+.|.+.++..... +.+.++||..||.|+++.|+-.++++ .+..
T Consensus 126 g~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 126 GAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred CchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 66676655432222 22578899999999999999999998 4443
No 63
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.42 E-value=2.7e-06 Score=91.36 Aligned_cols=149 Identities=17% Similarity=0.104 Sum_probs=97.9
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc----------------cc--cC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE----------------FR--NY 509 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~----------------~~--~~ 509 (819)
+.+.+++.++|+.|++.|+++.++||.....+..+++++|+..+....+++.+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 3466789999999999999999999999999999999999875433233333332110 00 00
Q ss_pred CHHHHHHHh---------------------------------h-----hh--ceeccCCH--------------------
Q 003452 510 THEERMEKV---------------------------------D-----KI--CVMARSSP-------------------- 529 (819)
Q Consensus 510 ~~~~~~~~~---------------------------------~-----~~--~v~ar~sP-------------------- 529 (819)
+.+...+.+ . .+ .++..-++
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 110000000 0 00 00100011
Q ss_pred ---------hhHHHHHHHHHhC----C-CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHH----hhc-CEEE--eCCC
Q 003452 530 ---------FDKLLMVQCLKQK----G-HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAK----ESS-DIVI--LDDN 588 (819)
Q Consensus 530 ---------~~K~~iV~~L~~~----g-~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak----~aa-Divl--~dd~ 588 (819)
.+|...++.+.+. . +.|+++||+.||.+|++.|++|++|+ ++.+..| .+| +.+. ..++
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 1566566555532 4 78999999999999999999999999 9999988 666 6666 4555
Q ss_pred hhHHHHHHH
Q 003452 589 FASVARVLR 597 (819)
Q Consensus 589 f~~i~~~i~ 597 (819)
-.++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 677777765
No 64
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.41 E-value=6.3e-07 Score=84.74 Aligned_cols=118 Identities=18% Similarity=0.230 Sum_probs=96.1
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHH
Q 003452 456 KAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLM 535 (819)
Q Consensus 456 ~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~i 535 (819)
-.|+.+.++||++.++||.+...+..=|+++||.. ++-. -++|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------~~qG--~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------LYQG--ISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------------------------------eeec--hHhHHHH
Confidence 47999999999999999999999999999999975 2222 2478877
Q ss_pred HHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHH
Q 003452 536 VQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN----FASVARVLRWGRCVHTNIQ 607 (819)
Q Consensus 536 V~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~----f~~i~~~i~~gR~~~~ni~ 607 (819)
.+.|.++ -+.|+++||..||.|+|++.++++|.. .+.+..++.||+|+.... +..+.+++..++..+.-..
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 7777654 367999999999999999999999998 889999999999988553 5566677776666655544
Q ss_pred H
Q 003452 608 K 608 (819)
Q Consensus 608 k 608 (819)
+
T Consensus 167 ~ 167 (170)
T COG1778 167 G 167 (170)
T ss_pred h
Confidence 3
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.41 E-value=5.8e-07 Score=87.71 Aligned_cols=110 Identities=17% Similarity=0.266 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+-|++++.+..|++.|.+|.++||--..-+..+|.++||+..+.+.+.-+.-...++...... -.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~-----------~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTN-----------EPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccC-----------Ccccc
Confidence 4679999999999999999999999999999999999999975543222111111111111000 01122
Q ss_pred HhhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 529 PFDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 529 P~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
..-|..+++.+++. -+.++|+|||.||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34789999999885 467999999999999999988877776
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.41 E-value=8.7e-07 Score=90.21 Aligned_cols=117 Identities=19% Similarity=0.149 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+...- ...+... +-.... +. .+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~----~~~~~~~-~~g~~~--------p~--~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY----SNELVFD-EKGFIQ--------PD--GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE----EEEEEEc-CCCeEe--------cc--eeeEEc
Confidence 68999999999999999999999999999999999999975310 0011110 000000 00 111234
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC
Q 003452 529 PFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD 581 (819)
Q Consensus 529 P~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD 581 (819)
|..|...++.+.++ .+.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 55677777666543 345899999999999999999999998 44444555555
No 67
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.26 E-value=3.3e-06 Score=88.67 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC----EEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD----IVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD----ivl~dd~f~~i~~~i~ 597 (819)
.|...++.+.++ | ..++++||+.||.+|++.++.|++|+ ++.+..|+.|| +|...++-.++.+++.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677888877654 3 35788999999999999999999999 89999999999 7776667778888775
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.26 E-value=5.3e-06 Score=85.80 Aligned_cols=137 Identities=16% Similarity=0.115 Sum_probs=89.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee--c
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM--A 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~--a 525 (819)
-+++|++.+.++.|++.|+++.++||.....+..+.+..+.... .. ......+|..+....+ .-..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~-~n~~~~~~~~~~~~~p--------~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IY-CNEADFSNEYIHIDWP--------HPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EE-eceeEeeCCeeEEeCC--------CCCccccc
Confidence 58999999999999999999999999999999999888754321 00 0112333333221100 00000 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh--cCEEEeCCChhHHHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES--SDIVILDDNFASVARVLR 597 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a--aDivl~dd~f~~i~~~i~ 597 (819)
......|..+++.++...+.+.|+|||.||.+|++.||+.++=+ .-.+-.++. +.+.. ++|..+...++
T Consensus 139 ~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11135799999998877788899999999999999999988754 211211111 22222 46777777664
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.18 E-value=1.2e-05 Score=83.63 Aligned_cols=128 Identities=20% Similarity=0.245 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccce------ecccccccCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAV------LEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~v------i~g~~~~~~~~~~~~~~~~~~~ 522 (819)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...... ..... +.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~-~~~~~~~~~g~~~g~~~~~-------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIF-ANQILFGDSGEYAGFDENE-------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEE-EeEEEEcCCCcEECccCCC--------------
Confidence 4789999999999999999999999999999999999999631100 00001 11110000
Q ss_pred eeccCCHhhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhh--CCcceeeCCCC-hHHHHhhcCEEEeCCChhHHHHH
Q 003452 523 VMARSSPFDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKE--TDIGLSMGIQG-TEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~--AdvGIamg~~g-t~~ak~aaDivl~dd~f~~i~~~ 595 (819)
. ...+..|...++.+.++ .+.+.|+||+.||..|.+. ++++++.|... .+.....+|+++. ++..+.+.
T Consensus 149 ~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 0 01123476777766654 2568899999999999777 56666666322 2334556899886 66666543
No 70
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.08 E-value=4.4e-06 Score=84.29 Aligned_cols=92 Identities=21% Similarity=0.271 Sum_probs=68.4
Q ss_pred ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHh-
Q 003452 452 PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPF- 530 (819)
Q Consensus 452 ~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~- 530 (819)
|++.+.|+.++++|++++++||+....+..+|+.+|+.... ++ +.++..-. +....++.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~-~~~~~~~~---------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VI-GNELFDNG---------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EE-EEEEECTT---------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EE-EEeeeecc---------cceeeeeECCCC
Confidence 77779999999999999999999999999999999997521 11 11110000 11134444444
Q ss_pred --hHHHHHHHH------HhCCCEEEEEcCCCCCHHHhh
Q 003452 531 --DKLLMVQCL------KQKGHVVAVTRDGTNDAPALK 560 (819)
Q Consensus 531 --~K~~iV~~L------~~~g~~Va~~GDG~ND~~aL~ 560 (819)
.|...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 399999999 344789999999999999986
No 71
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.05 E-value=8e-06 Score=81.36 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=70.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC---CCccceecccccccCCHHHHHHHhhhhceec
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD---TSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~---~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..-... ....-.++|+... -.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QV 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------cc
Confidence 3689999999999999999999999999999999999998642100 0000011121000 01
Q ss_pred cCCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhC
Q 003452 526 RSSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~A 562 (819)
...+..|...++.++++ .+.+.++|||.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24567899999887654 35689999999999999875
No 72
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.04 E-value=3.8e-05 Score=79.71 Aligned_cols=128 Identities=22% Similarity=0.308 Sum_probs=89.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.||+.+.++.|++.|+++.++||........+.+..|+.... ..++.+.... ...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-----SVVIGGDSLP----------------NKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----cEEEcCCCCC----------------CCCc
Confidence 468999999999999999999999999999999999999986431 1222222111 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceee--CCC-ChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSM--GIQ-GTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIam--g~~-gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.|+--..+++.++...+.+.++||+.||..+.+.|++ +|.+ |.. ..+.....+|+++. ++..+..++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 2332334444454445678999999999999999998 4444 321 23455567888874 88888877654
No 73
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.03 E-value=1.7e-05 Score=82.28 Aligned_cols=135 Identities=17% Similarity=0.145 Sum_probs=86.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce--e-c
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV--M-A 525 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v--~-a 525 (819)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +..... .......+|..+..-.+. -.. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i-~~n~~~~~~~~~~~~kp~--------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQI-YCNGSDFSGEYITITWPH--------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcE-EEeEEEecCCeeEEeccC--------Cccccccc
Confidence 78999999999999999999999999999999999988 643110 000112333322110000 000 0 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh--cCEEEeCCChhHHHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES--SDIVILDDNFASVARVLR 597 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a--aDivl~dd~f~~i~~~i~ 597 (819)
++ ...|..+++.++...+.+.|+|||.||.+|.+.||+.++-+ .-.+.+++. +.+.+ ++|..+...++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 01 13488888888877778999999999999999999977733 111222222 33333 36777766654
No 74
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.00 E-value=1.9e-05 Score=80.67 Aligned_cols=106 Identities=14% Similarity=0.080 Sum_probs=77.5
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-C--CccceecccccccCCHHHHHHHhhhhce
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-T--STGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
..+++|++.+.++.+++.|+++.++||.....+..+++.+|+..--.. . ...-..+|+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 457899999999999999999999999999999999999998642100 0 00001112110
Q ss_pred eccCCHhhHHHHHHHHHh-CC---CEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 524 MARSSPFDKLLMVQCLKQ-KG---HVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~-~g---~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
--.+.++.|...++.+.+ .+ +.+.++||+.||.|+++.|+.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345778887776654 33 36788999999999999999999887
No 75
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.99 E-value=3.8e-05 Score=80.03 Aligned_cols=44 Identities=16% Similarity=0.192 Sum_probs=39.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
+..-+++.++|++|+++|++++++||.....+..+.+++|+..+
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~ 57 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP 57 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 44556799999999999999999999999999999999998653
No 76
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.99 E-value=2.3e-05 Score=78.71 Aligned_cols=114 Identities=14% Similarity=0.118 Sum_probs=77.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc-
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR- 526 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar- 526 (819)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+...- ..++..+...+ ....+.-...++.++..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~ 144 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-----IEIYSNPASFD-NDGRHIVWPHHCHGCCSC 144 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-----eEEeccCceEC-CCCcEEEecCCCCccCcC
Confidence 489999999999999999999999999999999999999986421 11221111000 00000000011111111
Q ss_pred CCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCccee
Q 003452 527 SSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
.....|.++++.++++ .+.+.++|||.||..|.++||+-+|
T Consensus 145 ~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1223689999999887 7889999999999999999988664
No 77
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.99 E-value=3.1e-05 Score=82.04 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=97.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC--CCCCccceeccccc-c-----------------
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPG--QDTSTGAVLEGEEF-R----------------- 507 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~--~~~~~~~vi~g~~~-~----------------- 507 (819)
.+..|...++++++++.|+.++.+||+....++.+.+++++..++ ...+++.+..+... .
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456788999999999999999999999999999999999987652 11223333221100 0
Q ss_pred --------cC-----------------CHHH-------HHHHhhh----hce-ec-----cCCH--hhHHHHHHHHHhC-
Q 003452 508 --------NY-----------------THEE-------RMEKVDK----ICV-MA-----RSSP--FDKLLMVQCLKQK- 542 (819)
Q Consensus 508 --------~~-----------------~~~~-------~~~~~~~----~~v-~a-----r~sP--~~K~~iV~~L~~~- 542 (819)
.+ ..+. +.+.+.+ +.+ .+ ...| ..|...++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 0011 1111111 111 11 1222 3788888888664
Q ss_pred ---CCEEEEEcCCCCCHHHhhh-CCcceeeCCCChHHHHhhcC-------EEEeCCChhHHHHHHH
Q 003452 543 ---GHVVAVTRDGTNDAPALKE-TDIGLSMGIQGTEVAKESSD-------IVILDDNFASVARVLR 597 (819)
Q Consensus 543 ---g~~Va~~GDG~ND~~aL~~-AdvGIamg~~gt~~ak~aaD-------ivl~dd~f~~i~~~i~ 597 (819)
.+.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3578999999999999998 67999999 88888887543 4444444566666654
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.94 E-value=6.1e-05 Score=78.22 Aligned_cols=128 Identities=21% Similarity=0.317 Sum_probs=96.3
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+...- ..++.+.+.. ..+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F-----~~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF-----DVIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc-----ceEEcCCCCC----------------CCC
Confidence 5578899999999999999999999999999999999999998742 1222222211 122
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC---cceeeCCC-ChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETD---IGLSMGIQ-GTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad---vGIamg~~-gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
-.|.....+.+.+....+.+.|+||..+|..|=+.|+ ||+..|.+ +.......+|+++. ++..+...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 3455666666666555447999999999999999998 77888843 45677777999987 6777665543
No 79
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.87 E-value=8.9e-05 Score=76.88 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=35.7
Q ss_pred ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 452 PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 452 ~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
+.++++|+.++++|+++.++||.....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
No 80
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.85 E-value=4e-05 Score=71.77 Aligned_cols=117 Identities=18% Similarity=0.175 Sum_probs=77.1
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.-..++++++.+.+++|++.|++++++||.....+....+++|+.... ..++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF-----DPVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh-----hheeccchhhhhccccccccccccccc
Confidence 345688999999999999999999999999999999999999984321 111111100000000000001111134
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC-Ccce
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET-DIGL 566 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A-dvGI 566 (819)
.+-.|+.+..+.+.+....+.+.++||+.||..|.+.+ .-++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 45667777777777766567899999999999999984 4343
No 81
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.84 E-value=0.0001 Score=75.56 Aligned_cols=126 Identities=16% Similarity=0.183 Sum_probs=86.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.+++|+++|+++.++|+.....+..+.+..|+.... ..++...+. ...+-
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~----------------~~~KP 132 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-----DHVIGSDEV----------------PRPKP 132 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-----eeEEecCcC----------------CCCCC
Confidence 378899999999999999999999999999999999999986421 112221111 01222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCC-CChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGI-QGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~-~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.|+-=..+++.++-..+.+.|+||+.+|..+-++|++... -|. +..+..++.+|+++. ++..+..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 3333334444444345679999999999999999998643 331 233456778999875 666666554
No 82
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.59 E-value=0.00041 Score=81.55 Aligned_cols=41 Identities=10% Similarity=0.034 Sum_probs=36.9
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~ 490 (819)
.-+.+.++|+.++++|+.+++.||+....+..+++++|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34568999999999999999999999999999999999753
No 83
>PLN02382 probable sucrose-phosphatase
Probab=97.58 E-value=0.00038 Score=79.05 Aligned_cols=143 Identities=19% Similarity=0.184 Sum_probs=89.2
Q ss_pred HHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCC--CCCccceecccccc-----------------------
Q 003452 454 VKKAV-EDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ--DTSTGAVLEGEEFR----------------------- 507 (819)
Q Consensus 454 v~~aI-~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~--~~~~~~vi~g~~~~----------------------- 507 (819)
..+++ +++++.|+.+++.||+....+..+.++.++..++. ..++..+..+....
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44555 88999999999999999999999999999877631 00111111111000
Q ss_pred cC--------------------CHH---H----HHHHhh----hhce------eccCCH--hhHHHHHHHHHhC----C-
Q 003452 508 NY--------------------THE---E----RMEKVD----KICV------MARSSP--FDKLLMVQCLKQK----G- 543 (819)
Q Consensus 508 ~~--------------------~~~---~----~~~~~~----~~~v------~ar~sP--~~K~~iV~~L~~~----g- 543 (819)
.+ .++ + +.+.+. ++.+ +-...| ..|...++.|.++ |
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 00 000 1 111111 1111 112233 2588888887655 2
Q ss_pred --CEEEEEcCCCCCHHHhhhCC-cceeeCCCChHHHHhhc--------CEEEe-CCChhHHHHHHH
Q 003452 544 --HVVAVTRDGTNDAPALKETD-IGLSMGIQGTEVAKESS--------DIVIL-DDNFASVARVLR 597 (819)
Q Consensus 544 --~~Va~~GDG~ND~~aL~~Ad-vGIamg~~gt~~ak~aa--------Divl~-dd~f~~i~~~i~ 597 (819)
+.+.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++.. +.+-++|.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 47888999999999999999 699999 8998888743 45544 234555655554
No 84
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.57 E-value=0.00027 Score=75.16 Aligned_cols=43 Identities=5% Similarity=0.086 Sum_probs=39.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
..-+.+.++|++|+++||.|++.||........+.+++|+..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 3556789999999999999999999999999999999998754
No 85
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.55 E-value=0.00045 Score=71.21 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|+++|+++.++|+.....+..+-+..|+.... ..++.+.+.. ..+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF-----DVVITLDDVE----------------HAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce-----eEEEecCcCC----------------CCCCC
Confidence 47899999999999999999999999999999999999987531 1222222110 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc---eeeCCCCh-HHHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG---LSMGIQGT-EVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG---Iamg~~gt-~~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+--..+.+.+....+.+.|+||+.+|..|-++|++- +.-|.... +.....+|.++. ++..+.+++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3333444444443446789999999999999999984 33442222 234456888765 677776654
No 86
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.54 E-value=0.00045 Score=74.18 Aligned_cols=126 Identities=17% Similarity=0.240 Sum_probs=82.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.|++.++++.|++.|+++.++||.+...+..+.++.|+.... ..++.+.+.. ..+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~----------------~~K 157 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP----------------QKK 157 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC----------------CCC
Confidence 3478999999999999999999999999999999998888885421 1122222110 011
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eee--CCC-ChHHHHhhcCEEEeCCChhHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSM--GIQ-GTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iam--g~~-gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
-.|+-=..+.+.+.-..+.+.|+||+.||..+-+.|++. +++ |.. ..+..+..+|.++. ++..+.++
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~ 228 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPG 228 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHH
Confidence 122222233333332346789999999999999999973 333 321 22234557888884 66666544
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.49 E-value=0.00047 Score=70.81 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...- ..++.+.+.. ..+-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----SVLIGGDSLA----------------QRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----cEEEecCCCC----------------CCCCC
Confidence 68999999999999999999999999999999999999986531 1222222110 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee---CCCC-hHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM---GIQG-TEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam---g~~g-t~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+-=....+.+.-..+.+.++||+.||..+.++|++-... |... .+.....+|+++. ++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 2222233333333345688999999999999999986542 2111 1233456888775 5655543
No 88
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.45 E-value=0.00081 Score=71.99 Aligned_cols=139 Identities=13% Similarity=0.225 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHh-cCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec--cc---------------------
Q 003452 449 PCRPGVKKAVEDCQY-AGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE--GE--------------------- 504 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~-aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~--g~--------------------- 504 (819)
.+-+++.++++.|++ .|+.+.++||+....+..+.+.+++.-. ..++..+.+ |.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i--~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLA--GVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEE--EeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 345789999999998 7999999999999999988877664210 000111110 00
Q ss_pred -------c-----------cccCC--HHHHHH---Hhh----hhcee-----ccCCH--hhHHHHHHHHHhC----CCEE
Q 003452 505 -------E-----------FRNYT--HEERME---KVD----KICVM-----ARSSP--FDKLLMVQCLKQK----GHVV 546 (819)
Q Consensus 505 -------~-----------~~~~~--~~~~~~---~~~----~~~v~-----ar~sP--~~K~~iV~~L~~~----g~~V 546 (819)
. ++... ++.+.. .+. ...+. ....| .+|...++.+.+. ...+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0 00111 011111 111 01111 11122 3788877776554 3578
Q ss_pred EEEcCCCCCHHHhhhC----CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 547 AVTRDGTNDAPALKET----DIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 547 a~~GDG~ND~~aL~~A----dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.++||+.||.+|++.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 8899999999999999 9999999 553 44777766 455554444
No 89
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.33 E-value=0.0012 Score=68.88 Aligned_cols=127 Identities=13% Similarity=0.196 Sum_probs=86.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+... ...++.+.+.. ..+-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR-----CAVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc-----ccEEEecCcCC----------------CCCCC
Confidence 6789999999999999999999999999988888888888652 12222222110 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCCC-C-hHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGIQ-G-TEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~~-g-t~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+-=..+++.+.-..+.+.|+||+.||..|-+.|++... -|.. . .+.....+|+++. ++..+.+.+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 433344555555445679999999999999999998642 2311 1 1223456898885 77777766554
No 90
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.33 E-value=0.0009 Score=69.44 Aligned_cols=120 Identities=16% Similarity=0.234 Sum_probs=80.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.++++.|++.|+++.++|+........+.+..|+...- ..++.+.+.. ..+-
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF-----DALASAEKLP----------------YSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----cEEEEcccCC----------------CCCC
Confidence 478899999999999999999999999999999999999987631 2223222211 1122
Q ss_pred CHhhHHHHHHHHHhC---CCEEEEEcCCCCCHHHhhhCCcceeeCCCCh---HHHHhhcCEEEeCCChhHHH
Q 003452 528 SPFDKLLMVQCLKQK---GHVVAVTRDGTNDAPALKETDIGLSMGIQGT---EVAKESSDIVILDDNFASVA 593 (819)
Q Consensus 528 sP~~K~~iV~~L~~~---g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt---~~ak~aaDivl~dd~f~~i~ 593 (819)
.|+ -+...+++. .+.+.|+||..||+.+-++|++....-..+. +.-...+|.++. ++..+.
T Consensus 150 ~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 150 HPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred CHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 232 222333333 3568999999999999999998654331221 122335777765 565554
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.19 E-value=0.0036 Score=66.67 Aligned_cols=131 Identities=17% Similarity=0.219 Sum_probs=83.0
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------CccceecccccccCCHHHHHHHhhh
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-------STGAVLEGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-------~~~~vi~g~~~~~~~~~~~~~~~~~ 520 (819)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..++... +..-+++|.. ..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P~----------- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GPL----------- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CCc-----------
Confidence 468999999999999999999999999999999999999986543211 0111222211 000
Q ss_pred hceeccCCHhhHHHHHHH-----HH--hCCCEEEEEcCCCCCHHHhhhC---CcceeeC--CCC----hHHHHhhcCEEE
Q 003452 521 ICVMARSSPFDKLLMVQC-----LK--QKGHVVAVTRDGTNDAPALKET---DIGLSMG--IQG----TEVAKESSDIVI 584 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~-----L~--~~g~~Va~~GDG~ND~~aL~~A---dvGIamg--~~g----t~~ak~aaDivl 584 (819)
+. ...|.+.+.. ++ .....|.++|||.||++|-.-. +-=+.+| ... -+.=+++-|||+
T Consensus 188 --i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 --IH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred --cc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11 1345543332 22 1235688999999999995433 1122222 111 223467889999
Q ss_pred eCCChhHHHHHH
Q 003452 585 LDDNFASVARVL 596 (819)
Q Consensus 585 ~dd~f~~i~~~i 596 (819)
.+|.--.++..+
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 998765665544
No 92
>PTZ00174 phosphomannomutase; Provisional
Probab=97.18 E-value=0.0014 Score=69.36 Aligned_cols=52 Identities=21% Similarity=0.271 Sum_probs=42.5
Q ss_pred hHHHHHHHHHhCCCEEEEEcC----CCCCHHHhhhC-CcceeeCCCChHHHHhhcCEE
Q 003452 531 DKLLMVQCLKQKGHVVAVTRD----GTNDAPALKET-DIGLSMGIQGTEVAKESSDIV 583 (819)
Q Consensus 531 ~K~~iV~~L~~~g~~Va~~GD----G~ND~~aL~~A-dvGIamg~~gt~~ak~aaDiv 583 (819)
+|..-++.|.++.+.|+++|| |-||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 188 sKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 677777777777678899999 99999999976 6778888 8888888776554
No 93
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=97.16 E-value=8e-05 Score=55.95 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=28.6
Q ss_pred chhhccCCCCCCCcccchhhhhh-hhhcchhhhhhHHH
Q 003452 11 SIESLLNFPATLNVPTKKWHSAF-TKIYCSRTLLSLAE 47 (819)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 47 (819)
.++...++|| +++++|||+|+ +|+|++|||+..++
T Consensus 5 ~Fdi~~Kn~s--~e~l~rWR~a~~lv~N~~RRFR~~~d 40 (47)
T PF12515_consen 5 NFDIPAKNSS--EEALRRWRQAVGLVKNARRRFRYTAD 40 (47)
T ss_pred ccCCCCCCCC--HHHHHHHHHHhHHhccccceeeeccc
Confidence 3455556665 99999999999 99999999987765
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.08 E-value=0.0027 Score=65.44 Aligned_cols=107 Identities=12% Similarity=0.085 Sum_probs=74.1
Q ss_pred CCCccHHHHHH-HHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVE-DCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~-~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++|++.+.++ .+++.|++++++|+-....+..+|+..|+...+ . ++ |.++..-... + ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-----~-~i-~t~le~~~gg-------~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-----N-LI-ASQIERGNGG-------W-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-----c-EE-EEEeEEeCCc-------e-EcCccC
Confidence 46899999996 789899999999999999999999996664321 1 11 2222110000 0 012346
Q ss_pred CHhhHHHHHHHHHh-CCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 528 SPFDKLLMVQCLKQ-KGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 528 sP~~K~~iV~~L~~-~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
..++|.+-++..-. ..+..-+=||+.||.|||+.||.++++..
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 67889887765432 22334456999999999999999999873
No 95
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.07 E-value=0.0032 Score=65.06 Aligned_cols=125 Identities=22% Similarity=0.274 Sum_probs=82.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC--CCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL--KPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~--~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
.++.||+.+.+++|++.|+++.++|+-....+..+.+..|+. .. ...++.+.+.. ..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~-----f~~i~~~~~~~----------------~~ 144 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD-----VDAVVCPSDVA----------------AG 144 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc-----CCEEEcCCcCC----------------CC
Confidence 479999999999999999999999999999999999999986 32 12233322211 01
Q ss_pred cCCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcceeeC-CCCh----HHHHhhcCEEEeCCChhHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLSMG-IQGT----EVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvGIamg-~~gt----~~ak~aaDivl~dd~f~~i~~~ 595 (819)
+-.|+-=....+.+.-. .+.+.|+||+.+|..+-+.|++..+++ ..|. +.....+|.++. ++..+..+
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 22232222233333222 257999999999999999999986322 1222 122345777764 66665544
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.98 E-value=0.0061 Score=65.45 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...- ..++.+.+.. ..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-----~~vi~~~~~~-------------------~k 197 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-----SVVQAGTPIL-------------------SK 197 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-----EEEEecCCCC-------------------CC
Confidence 67899999999999999999999999999999999999986531 1222222110 01
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCCCC-hHHHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGIQG-TEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~~g-t~~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+-=..+++.+.-..+.++|+||+.+|..+-++|++-.. -|... .+.....+|+++. ++..+.+++
T Consensus 198 ~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 198 RRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 211112222222234568999999999999999998533 23111 1233446898875 777777655
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.95 E-value=0.0055 Score=65.32 Aligned_cols=121 Identities=12% Similarity=0.108 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+... ...++.+.+.. ..+-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~ii~~~d~~----------------~~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-----FSVVLAAEDVY----------------RGKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-----CcEEEecccCC----------------CCCCC
Confidence 5789999999999999999999999999999999999998653 22344443321 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce-eeCCCChHHHHhhcCEEEeCCChhHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL-SMGIQGTEVAKESSDIVILDDNFASV 592 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI-amg~~gt~~ak~aaDivl~dd~f~~i 592 (819)
|+-=...++.+.-..+.+.|+||..+|..|=+.|++-. ++...........+|.++. ++..+
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 33223334444434456899999999999999999843 2221222222334777765 55544
No 98
>PRK11590 hypothetical protein; Provisional
Probab=96.94 E-value=0.004 Score=64.21 Aligned_cols=106 Identities=12% Similarity=0.090 Sum_probs=74.5
Q ss_pred CCCccHHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccccc-CCHHHHHHHhhhhceecc
Q 003452 449 PCRPGVKKAV-EDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRN-YTHEERMEKVDKICVMAR 526 (819)
Q Consensus 449 ~lr~~v~~aI-~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~-~~~~~~~~~~~~~~v~ar 526 (819)
.++|++.+.+ +.+++.|+++.++|+-...-+..+++.+|+...+ . ++ |.++.. ++. + -.-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~-~i-~t~l~~~~tg--------~-~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----N-LI-ASQMQRRYGG--------W-VLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----c-eE-EEEEEEEEcc--------E-ECCcc
Confidence 5589999999 5788899999999999999999999999963211 1 11 222211 000 0 01234
Q ss_pred CCHhhHHHHHHHHH-hCCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 527 SSPFDKLLMVQCLK-QKGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 527 ~sP~~K~~iV~~L~-~~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
|..+.|.+.++..- ......-+=||..||.|||+.|+-+++++.
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 66788988777543 233334455999999999999999999973
No 99
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.92 E-value=0.0063 Score=64.41 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+-+...+..+-+..|+... ...++.+.+.. ..+-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~iv~~~~~~----------------~~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-----FQAVIIGSECE----------------HAKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-----CcEEEecCcCC----------------CCCCC
Confidence 5789999999999999999999999999999999999998753 22334443321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCCCChHHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGIQGTEVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~~gt~~ak~aaDivl~ 585 (819)
|+--....+.+.-..+.+.|+||..+|..+=++|++-.. -|....+.....+|+++.
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 433344444444445678999999999999999998432 221112233446888876
No 100
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.89 E-value=0.002 Score=65.82 Aligned_cols=39 Identities=23% Similarity=0.350 Sum_probs=35.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECG 487 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~G 487 (819)
++.+++.+++++|++.|+++.++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999998844
No 101
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.87 E-value=0.0033 Score=63.94 Aligned_cols=94 Identities=16% Similarity=0.107 Sum_probs=68.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+.... ..++.+.+ +..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~-----------------~~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-----PVQIWMED-----------------CPPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-----CEEEeecC-----------------CCCC
Confidence 4557778899999999999999999999999999999999987531 12222222 1123
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A 562 (819)
-.|+--....+.+.-..+.+.|+||+.+|+.+-++|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 445544555555555556799999999999876654
No 102
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.84 E-value=0.0098 Score=63.64 Aligned_cols=124 Identities=14% Similarity=0.177 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~~----------------~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDVP----------------AGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcCC----------------CCCCC
Confidence 56799999999999999999999999999888888887765421 01222222210 11122
Q ss_pred HhhHHHHHHHHHhCC----CEEEEEcCCCCCHHHhhhCCc---ceeeCCCC------------------------hHHHH
Q 003452 529 PFDKLLMVQCLKQKG----HVVAVTRDGTNDAPALKETDI---GLSMGIQG------------------------TEVAK 577 (819)
Q Consensus 529 P~~K~~iV~~L~~~g----~~Va~~GDG~ND~~aL~~Adv---GIamg~~g------------------------t~~ak 577 (819)
|+ -+.+.+++.| +.+.|+||+.+|..+=+.|++ |+.-|... .+...
T Consensus 161 p~---~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (267)
T PRK13478 161 PW---MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA 237 (267)
T ss_pred hH---HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 22 2333344332 568999999999999999997 55444210 12233
Q ss_pred hhcCEEEeCCChhHHHHHHH
Q 003452 578 ESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 578 ~aaDivl~dd~f~~i~~~i~ 597 (819)
.-+|+++. ++..+...+.
T Consensus 238 ~~a~~vi~--~~~~l~~~l~ 255 (267)
T PRK13478 238 AGAHYVID--TIADLPAVIA 255 (267)
T ss_pred cCCCeehh--hHHHHHHHHH
Confidence 45788875 6777776653
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.83 E-value=0.0077 Score=63.81 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~~----------------~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDVP----------------AGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccCC----------------CCCCC
Confidence 56799999999999999999999999999999999999986531 01223322211 11222
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=....+.+.-. .+.+.|+||..+|..+=+.|++-
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 33222333333321 34589999999999999999974
No 104
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.73 E-value=0.026 Score=56.93 Aligned_cols=147 Identities=20% Similarity=0.260 Sum_probs=95.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-----Cccceecccc---------cccCCHHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-----STGAVLEGEE---------FRNYTHEER 514 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-----~~~~vi~g~~---------~~~~~~~~~ 514 (819)
.+-||+.++++.+++. ....++|---.+-+.++|.-+|++..+... +...+-++.. ...++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4569999999999875 566777888899999999999997543210 0000001100 001122222
Q ss_pred HHHhhhhceeccCCHhh---------------HHHHHHHHHhC---CCEEEEEcCCCCCHHHhhhCCc--ceeeCCCChH
Q 003452 515 MEKVDKICVMARSSPFD---------------KLLMVQCLKQK---GHVVAVTRDGTNDAPALKETDI--GLSMGIQGTE 574 (819)
Q Consensus 515 ~~~~~~~~v~ar~sP~~---------------K~~iV~~L~~~---g~~Va~~GDG~ND~~aL~~Adv--GIamg~~gt~ 574 (819)
.+.++. +|.|..|.+ |.++++.+.+. ....+++||.+.|..||+.+.= |+|+.-||.+
T Consensus 162 fe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 466666654 45555555443 3456889999999999998742 3666667889
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHH
Q 003452 575 VAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
-|...||+.+...+..++..++..
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 999999999998888887777764
No 105
>PRK11587 putative phosphatase; Provisional
Probab=96.65 E-value=0.011 Score=61.16 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++.+.+.. ..+-.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~----------------~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK----------------RGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc----------------CCCCC
Confidence 5789999999999999999999999887777766667777321 1222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChHHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTEVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~~ak~aaDivl~ 585 (819)
|+-=....+.+.-..+.+.|+||..+|+.+=+.|++- |++...........+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 3322333333333346799999999999999999984 44441112223345777665
No 106
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.51 E-value=0.016 Score=56.88 Aligned_cols=102 Identities=22% Similarity=0.231 Sum_probs=68.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCCccceec-ccccccCCHHHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK---AIATEC---G--ILKPGQDTSTGAVLE-GEEFRNYTHEERMEK 517 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~---~iA~~~---G--I~~~~~~~~~~~vi~-g~~~~~~~~~~~~~~ 517 (819)
+|.+.|++.+++++++++|+++.++||+....+. ....++ | +.. ..++.. |..+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~~------ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALHR------ 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhhc------
Confidence 4678899999999999999999999999988874 444452 3 322 122222 222211111
Q ss_pred hhhhceeccCCHhh-HHHHHHHHHh-----CCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 518 VDKICVMARSSPFD-KLLMVQCLKQ-----KGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 518 ~~~~~v~ar~sP~~-K~~iV~~L~~-----~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.+. ...|+. |...++.+++ ....++..||+.+|+.+.++++|-
T Consensus 93 ----e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ----EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 022 233443 8888887776 356778899999999999887664
No 107
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.38 E-value=0.0072 Score=63.29 Aligned_cols=90 Identities=20% Similarity=0.248 Sum_probs=63.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGD----NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD----~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
-.+.|++.+.++.+++.|+++.++||. ...|+..+.+..|+..... ...++.|...
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~----------------- 172 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP----------------- 172 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC-----------------
Confidence 446777999999999999999999996 4679999999999943210 1222222210
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 524 MARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.-.+|.. .+++.| .+.|+||..+|..+-++|++-
T Consensus 173 ----~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 ----GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred ----CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0123443 344444 488999999999999999874
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.37 E-value=0.0068 Score=63.48 Aligned_cols=89 Identities=20% Similarity=0.197 Sum_probs=63.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD----NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD----~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... ...++.++....
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-----f~~i~~~d~~~~---------------- 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-----NPVIFAGDKPGQ---------------- 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-----eeEEECCCCCCC----------------
Confidence 44555999999999999999999998 77899999999999652 123333332110
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
..| +|. ..+++.| .+.|+||..||..+-+.|++-
T Consensus 173 --~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 --YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred --CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 2345555 478999999999999999863
No 109
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.33 E-value=0.019 Score=66.51 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+++.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f-----~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV-----TETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc-----ceeEecCCCC-----------------CCCC
Confidence 78899999999999999999999999999999999999986531 2233333221 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCC-CChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGI-QGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~-~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+-=....+.++ -+.+.|+||..+|..+-+.|++- |++.. .+.+.....+|+++. ++..+.+++.
T Consensus 388 P~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 321111222221 35689999999999999999973 33321 122222345788875 7777766554
No 110
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.30 E-value=0.011 Score=62.47 Aligned_cols=45 Identities=27% Similarity=0.341 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHH
Q 003452 530 FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEV 575 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ 575 (819)
..|...|+.|+++ + +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 4689999988876 2 35667899999999999999999999 66665
No 111
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.26 E-value=0.042 Score=55.43 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=33.7
Q ss_pred cHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 453 GVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
.+.+.+.+|+++|+.|+.+|.-....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999988888899999987
No 112
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.25 E-value=0.011 Score=57.74 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC----CCCCCCCCC-ccceecccccccCCHHHHHHHhhhhce
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECG----ILKPGQDTS-TGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~G----I~~~~~~~~-~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
.++|+-++.++.+++.++.++++|+--..-...+-+.++ |..-+...+ .....+|.-.- +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 589999999999999999999999987777777766655 221110000 01112222111 1
Q ss_pred eccCC--HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 524 MARSS--PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 524 ~ar~s--P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
....+ -.+|...|+.+++..+.+.|+|||+.|..|-+.+|+=+|=
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 11112 2489999999999999999999999999998888887753
No 113
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.22 E-value=0.032 Score=55.91 Aligned_cols=128 Identities=15% Similarity=0.145 Sum_probs=71.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNV---------------FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEE 513 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~---------------~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~ 513 (819)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+... .++....... ++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~~---~~ 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHPE---DG 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCCC---CC
Confidence 3579999999999999999999998762 112223334554211 0110000000 00
Q ss_pred HHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC-CChH---HHHhhc--CEEEeCC
Q 003452 514 RMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI-QGTE---VAKESS--DIVILDD 587 (819)
Q Consensus 514 ~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~-~gt~---~ak~aa--Divl~dd 587 (819)
.-..+-.|+--....+.+.-..+.+.|+||..+|..+-+.|++. +++. .|.. .....+ |.++.
T Consensus 99 --------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~-- 167 (181)
T PRK08942 99 --------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD-- 167 (181)
T ss_pred --------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--
Confidence 00112233333444444444456799999999999999999974 2221 2221 122235 77764
Q ss_pred ChhHHHHHHH
Q 003452 588 NFASVARVLR 597 (819)
Q Consensus 588 ~f~~i~~~i~ 597 (819)
++..+.+++.
T Consensus 168 ~l~el~~~l~ 177 (181)
T PRK08942 168 SLADLPQALK 177 (181)
T ss_pred CHHHHHHHHH
Confidence 6766666543
No 114
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.22 E-value=0.012 Score=61.22 Aligned_cols=108 Identities=25% Similarity=0.394 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHH--HhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Cccceeccc-ccc--cCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDC--QYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-STGAVLEGE-EFR--NYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l--~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-~~~~vi~g~-~~~--~~~~~~~~~~~~~~~ 522 (819)
|+.|+.+++++.| ++.|+.+.++|--|..--..+-+.-|+....... .+....++. .++ .+.. +
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~----------h 140 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHS----------H 140 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccC----------C
Confidence 6789999999999 5689999999999999999999999987532110 000111110 111 1110 1
Q ss_pred eeccCCH-hhHHHHHHHHHhC----C---CEEEEEcCCCCC-HHHhh--hCCcce
Q 003452 523 VMARSSP-FDKLLMVQCLKQK----G---HVVAVTRDGTND-APALK--ETDIGL 566 (819)
Q Consensus 523 v~ar~sP-~~K~~iV~~L~~~----g---~~Va~~GDG~ND-~~aL~--~AdvGI 566 (819)
-+.++.| .=|..+++.+++. | ..|.++|||.|| +|+++ .+|+-.
T Consensus 141 ~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 141 GCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 2345555 4799999988765 4 789999999999 45543 455443
No 115
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.21 E-value=0.018 Score=58.54 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+...- ..++...+.. ..+-.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~----------------~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-----DAVLSADAVR----------------AYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-----heeEehhhcC----------------CCCCC
Confidence 57899999999999999999999999999999999999985421 1222222111 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=..+.+.+.-.-+.+.++||+.+|+.+-+.|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 2211223333333346688999999999998888875
No 116
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.14 E-value=0.038 Score=61.74 Aligned_cols=121 Identities=12% Similarity=0.094 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||... ...++.+.+.. ...-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-----Fd~Iv~sddv~----------------~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-----FSVIVAAEDVY----------------RGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-----ceEEEecCcCC----------------CCCCC
Confidence 5789999999999999999999999999999999999998753 12333333321 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHH-HhhcCEEEeCCChhHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA-KESSDIVILDDNFASV 592 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~a-k~aaDivl~dd~f~~i 592 (819)
|+-=...++.+.-..+.+.|+||..+|+.|-+.|++-...-..+.... ...+|+++. ++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 333333444444445779999999999999999998533221222222 234787765 55544
No 117
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.10 E-value=0.022 Score=69.76 Aligned_cols=61 Identities=21% Similarity=0.272 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhhC---CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKET---DIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~A---dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.+|...++.+.+. ...|+++||+.||.+|++.+ ..+++|| ++ +.+|++.+.+. ..+.++++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 4788888888764 35799999999999999986 6899998 43 56788888743 44555443
No 118
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.03 E-value=0.012 Score=58.88 Aligned_cols=94 Identities=16% Similarity=0.239 Sum_probs=60.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|+++|+++.++|+... +..+.+..|+... ...++.+.+.. ..+-.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY-----FDAIVDPAEIK----------------KGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh-----CcEEEehhhcC----------------CCCCC
Confidence 6789999999999999999999997532 4566778887643 12223222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=....+.+.-..+.+.|+||..+|+.+-+.|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2221222333322235688999999999999999874
No 119
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.02 E-value=0.019 Score=59.23 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++.|+++.++|+-+...+....+.+|+...- ..++.+.+.. ..+-.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-----DAVITSEEEG----------------VEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-----cEEEEeccCC----------------CCCCC
Confidence 68899999999999999999999999888888888889986431 1222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvG 565 (819)
|+-=..+.+.+.-..+.+.|+||.. +|+.+=+.|++-
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 2222223333332345789999998 999999999874
No 120
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.98 E-value=0.026 Score=56.11 Aligned_cols=94 Identities=18% Similarity=0.191 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... ...++.+.+.. ..+-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-----FDVVIFSGDVG----------------RGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-----CCEEEEcCCCC----------------CCCCC
Confidence 688999999999999999999999988877 556556888642 11222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI 564 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv 564 (819)
|+-=..+.+.+.-....+.++||...|+.+-+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333333444444345678999999999988888876
No 121
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.86 E-value=0.037 Score=52.28 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=63.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhh
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN--------VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~--------~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~ 520 (819)
++.|++.++++.|+++|+++.++|+.. ......+.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~--------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H--------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C---------------
Confidence 578999999999999999999999998 7788888888888531 111111 0
Q ss_pred hceeccCCHhhHHHHHHHHH-hCCCEEEEEcC-CCCCHHHhhhCCcc
Q 003452 521 ICVMARSSPFDKLLMVQCLK-QKGHVVAVTRD-GTNDAPALKETDIG 565 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~L~-~~g~~Va~~GD-G~ND~~aL~~AdvG 565 (819)
..+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-+.+++-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01122222233444442 34467999999 58999998888763
No 122
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.75 E-value=0.038 Score=57.02 Aligned_cols=122 Identities=11% Similarity=0.050 Sum_probs=75.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.+++|++. +++.++|+-....+..+.++.|+...- ..++...+.. ..+-.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----DDIFVSEDAG----------------IQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----CEEEEcCccC----------------CCCCC
Confidence 5789999999999999 999999999999999999999986531 1222222111 01122
Q ss_pred HhhHHHHHHHH-HhCCCEEEEEcCCC-CCHHHhhhCCcce-eeCC-CChHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCL-KQKGHVVAVTRDGT-NDAPALKETDIGL-SMGI-QGTEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L-~~~g~~Va~~GDG~-ND~~aL~~AdvGI-amg~-~gt~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+-=...++.+ .-.-+.+.|+||.. +|..+=+.+++-. .... ..++.....+|.++. ++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 22222333333 22235689999998 8999999999632 2221 122122234566654 5655544
No 123
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.74 E-value=0.028 Score=61.18 Aligned_cols=108 Identities=14% Similarity=-0.027 Sum_probs=75.6
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK-PGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~-~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
...+++.|++.++++.|++.|+++.++||....++..+.+.+|+.. .- ..+.|.+.. ..+ +... -
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f------~~i~~~~~~----~~~---~~~~-~ 248 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF------DDLIGRPPD----MHF---QREQ-G 248 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch------hhhhCCcch----hhh---cccC-C
Confidence 3578999999999999999999999999999999999999998864 21 011111100 000 0000 0
Q ss_pred eccCCHhhHHHHHHHHHh-CCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 524 MARSSPFDKLLMVQCLKQ-KGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~-~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
-.+-.|+-+...++.+-. .-+.+.|+||..+|+.+-+.|++-.
T Consensus 249 ~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 249 DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 124456667766666533 2367999999999999999999864
No 124
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.71 E-value=0.031 Score=58.17 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=66.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.||+.+.++.|++.|+++.++|+-+...+...-+..|+...- ..++.+.+... .+-
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~iv~s~~~~~----------------~KP 150 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-----DLLLSTHTFGY----------------PKE 150 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-----CEEEEeeeCCC----------------CCC
Confidence 367899999999999999999999999888888887888876421 12222222110 111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.|+-=..+.+.+.-..+.+.|+||..+|+.+=+.|++..
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 222112222333323456899999999999999999963
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.63 E-value=0.023 Score=56.82 Aligned_cols=95 Identities=16% Similarity=0.229 Sum_probs=61.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.||+.+.++.|++.|+++.++|+. ..+..+-+.+|+...- ..++.+.+.. ..+-
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-----~~v~~~~~~~----------------~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-----DAIVDADEVK----------------EGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-----CEeeehhhCC----------------CCCC
Confidence 478999999999999999999999987 6677778888886421 1122211110 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.|+-=....+.+.-..+.+.|+||..+|..+=+.|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 22111222233322235688999999999999988874
No 126
>PRK06769 hypothetical protein; Validated
Probab=95.58 E-value=0.03 Score=55.88 Aligned_cols=97 Identities=13% Similarity=-0.047 Sum_probs=58.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCCcccee-cccccccCCHHHHHHHhhh
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVF--------TAKAIATECGILKPGQDTSTGAVL-EGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~--------ta~~iA~~~GI~~~~~~~~~~~vi-~g~~~~~~~~~~~~~~~~~ 520 (819)
+.|++++++++|++.|+++.++|+.... .+....+..|+...- .... .+++..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-----~~~~~~~~~~~------------- 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-----LCPHKHGDGCE------------- 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-----ECcCCCCCCCC-------------
Confidence 6799999999999999999999987631 223333445553210 0000 000000
Q ss_pred hceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 521 ICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
..+-.|+-=...++.+.-.-+.+.|+||..+|..+=++|++-..
T Consensus 91 ---~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 ---CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred ---CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333233444443334669999999999999999988544
No 127
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.51 E-value=0.02 Score=56.02 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=69.0
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.|++.+.++.|++.|+++.++|+.+........+..|+.... ..++...+.. ..+
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f-----~~i~~~~~~~----------------~~K 133 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF-----DEIISSDDVG----------------SRK 133 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC-----SEEEEGGGSS----------------SST
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc-----ccccccchhh----------------hhh
Confidence 3467899999999999999999999999999999999999987321 1222222211 011
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
-.|+-=..+++.+.-..+.+.++||+.+|..+-++|++-
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred hHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 122222334444443456799999999999999988764
No 128
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.44 E-value=0.066 Score=53.37 Aligned_cols=107 Identities=11% Similarity=0.046 Sum_probs=70.3
Q ss_pred EEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHcCCCCCCCCC----CccceecccccccCCHHHH
Q 003452 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGD-NVFTAKAIATECGILKPGQDT----STGAVLEGEEFRNYTHEER 514 (819)
Q Consensus 440 ~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD-~~~ta~~iA~~~GI~~~~~~~----~~~~vi~g~~~~~~~~~~~ 514 (819)
.....+-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+....... ....+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~i-------------- 101 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDR-------------- 101 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceee--------------
Confidence 34444445578899999999999999999999975 889999999999985211000 00111
Q ss_pred HHHhhhhceeccCCHhhH--HHHHHHHHhC------CCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 515 MEKVDKICVMARSSPFDK--LLMVQCLKQK------GHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 515 ~~~~~~~~v~ar~sP~~K--~~iV~~L~~~------g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
+.+...+..| ..+.+.+.+. -+.+.|+||...|+.+-++|++-...
T Consensus 102 --------v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 --------IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred --------eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1111111112 2234444322 35799999999999999999886544
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=95.44 E-value=0.072 Score=55.14 Aligned_cols=124 Identities=12% Similarity=0.095 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++.|+ +|+++.++|......+...-+..|+...- ..++.+.+.. ...-.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~----------------~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-----DLLVISEQVG----------------VAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-----CEEEEECccC----------------CCCCC
Confidence 47899999999999 68999999999888888888888886421 1222222110 01112
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCC-CCHHHhhhCCcc-eeeCCCChH-HHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQK-GHVVAVTRDGT-NDAPALKETDIG-LSMGIQGTE-VAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~-g~~Va~~GDG~-ND~~aL~~AdvG-Iamg~~gt~-~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+-=..+++.+.-. .+.+.|+||.. +|+.+=+.|++- +.+...+.. .....+|+++. ++..+..++
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 22212233333211 25699999998 699999999985 333211211 11124677764 677666554
No 130
>PLN02940 riboflavin kinase
Probab=95.43 E-value=0.052 Score=61.24 Aligned_cols=116 Identities=17% Similarity=0.139 Sum_probs=73.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH-HcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIAT-ECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~-~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+... ...++.+++.. ..+-
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~-----Fd~ii~~d~v~----------------~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES-----FSVIVGGDEVE----------------KGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----CCEEEehhhcC----------------CCCC
Confidence 578999999999999999999999998888877655 5777542 12233332211 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh--HHHHhhcCEEEe
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGT--EVAKESSDIVIL 585 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt--~~ak~aaDivl~ 585 (819)
.|+-=...++.+.-..+.+.|+||+.+|+.+-+.|++....-..+. +.....+|.++.
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 2332233334443335679999999999999999998633221221 223334666554
No 131
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.18 E-value=0.082 Score=57.24 Aligned_cols=118 Identities=18% Similarity=0.174 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+-+......+-+..+...... .-.++.+.+.. ..+-.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~~----------------~~KP~ 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDVP----------------KKKPD 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEeccccC----------------CCCCC
Confidence 688999999999999999999999998888877766553221100 00112222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh--HHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGT--EVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt--~~ak~aaDivl~ 585 (819)
|+-=..+.+.+.-..+.+.|+||+.+|..|-++|++.......|. ......+|+++.
T Consensus 205 p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 333233444444344669999999999999999998655432322 111235788764
No 132
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.72 E-value=0.13 Score=54.81 Aligned_cols=86 Identities=12% Similarity=0.076 Sum_probs=59.7
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVF---TAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~---ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
..++-|++.+.++.+++.|+++.++|+.... .+...-+..|+..... .. +
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d~------------------------l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---EH------------------------L 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---ce------------------------E
Confidence 5567899999999999999999999997743 3345556788864211 11 2
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHh
Q 003452 524 MARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL 559 (819)
+.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 333222345555566666567799999999998543
No 133
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.70 E-value=0.089 Score=52.28 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=60.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~-~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.... + ...-
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~----------~--------------------~~KP 92 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP----------H--------------------AVKP 92 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc----------C--------------------CCCC
Confidence 567999999999999999999999988 67778888888864210 0 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcc
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIG 565 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvG 565 (819)
.|+-=..+.+.+.-..+.+.|+||.. .|..+=+.|++-
T Consensus 93 ~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 93 PGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred ChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 22211222222222345699999998 799999999873
No 134
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.47 E-value=0.15 Score=50.96 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=24.3
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV 476 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~ 476 (819)
+.|++.+++++|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999997653
No 135
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.37 E-value=0.12 Score=50.01 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCccceecc---cccccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNV---------------FTAKAIATECGILKPGQDTSTGAVLEG---EEFRNYT 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~---------------~ta~~iA~~~GI~~~~~~~~~~~vi~g---~~~~~~~ 510 (819)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.... ..... .+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~~~~~~---- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG------VLFCPHHPADN---- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE------EEECCCCCCCC----
Confidence 3689999999999999999999998762 4556677788875210 00000 000
Q ss_pred HHHHHHHhhhhceeccCCHhh--HHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 511 HEERMEKVDKICVMARSSPFD--KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 511 ~~~~~~~~~~~~v~ar~sP~~--K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
... ..|+- =..+++.+.-.-+.+.|+||...|..+-+.+++-
T Consensus 97 ------------~~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 ------------CSC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------------CCC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 12211 1122222222235699999999999988888774
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.31 E-value=0.12 Score=52.52 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+-|++.++++.|++.|+++.++|+-... .....+.+|+...- ..++...+.. ..+-+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-----d~i~~s~~~~----------------~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-----DFVVTSYEVG----------------AEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-----ceEEeecccC----------------CCCCC
Confidence 57799999999999999999999986554 46677778875421 1122111110 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDI 564 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~Adv 564 (819)
|+-=..+++.+.-..+.+.|+||+. +|+.+=++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 2211222233322346799999997 89988888765
No 137
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.16 E-value=0.41 Score=50.40 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=37.8
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHH--HHHHHcCCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK--AIATECGILK 490 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~--~iA~~~GI~~ 490 (819)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 334445678899999999999999999999986554443 5567888864
No 138
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.14 E-value=0.14 Score=49.49 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=59.0
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
+.+..+++.+.++.|++.|+++.++|+-....+....+.. +.... ..++...+ +..+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----~~i~~~~~-----------------~~~K 118 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----DLILGSDE-----------------FGAK 118 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----cEEEecCC-----------------CCCC
Confidence 4455689999999999999999999999999988887765 33211 11111111 1112
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETD 563 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad 563 (819)
-.|+-=..+.+.+.-.. .+.++||..+|..+-+.|+
T Consensus 119 p~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred cCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 22222222223332223 6899999999998877663
No 139
>PLN02811 hydrolase
Probab=93.76 E-value=0.18 Score=52.14 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=59.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHH-HHHHcCCCCCCCCCCccceeccc--ccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA-IATECGILKPGQDTSTGAVLEGE--EFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~-iA~~~GI~~~~~~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ 524 (819)
-++.||+.+.++.|++.|+++.++||-....... ..+..|+... ...++.+. +.. .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~~----------------~ 135 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEVK----------------Q 135 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhcc----------------C
Confidence 3578999999999999999999999987654432 2222233221 11122222 110 0
Q ss_pred ccCCHhhHHHHHHHHH---hCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 525 ARSSPFDKLLMVQCLK---QKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~---~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.+-.|+-=...++.+. -..+.+.|+||...|+.|-+.|++-.
T Consensus 136 ~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 136 GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1122322233334442 22367999999999999999999854
No 140
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.36 E-value=0.32 Score=50.53 Aligned_cols=88 Identities=17% Similarity=0.104 Sum_probs=57.9
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT---AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t---a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
+-|.-|++.++++.+++.|++|+++||+.... +..--++.|+... ..+++.+.+-.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~---------------- 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS---------------- 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC----------------
Confidence 44888999999999999999999999999755 3233345676531 12333321100
Q ss_pred eccCCHhhHHHHHHHHHhCCC-EEEEEcCCCCCH
Q 003452 524 MARSSPFDKLLMVQCLKQKGH-VVAVTRDGTNDA 556 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~~g~-~Va~~GDG~ND~ 556 (819)
....-+-|...-+.+.++|+ +++.+||-.+|.
T Consensus 177 -~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 177 -NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred -CchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 00111237777777777764 677899999886
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.35 E-value=0.15 Score=50.33 Aligned_cols=95 Identities=16% Similarity=0.036 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCccceec----ccccccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD---------------NVFTAKAIATECGILKPGQDTSTGAVLE----GEEFRNY 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD---------------~~~ta~~iA~~~GI~~~~~~~~~~~vi~----g~~~~~~ 509 (819)
++-|++.+++++|++.|+++.++|.- ....+..+.++.|+.-. ..++. ..+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~~~~~~~~~~--- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLICPHFPDDNC--- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEECCCCCCCCC---
Confidence 45689999999999999999999974 24456667777777511 11111 0110
Q ss_pred CHHHHHHHhhhhceeccCCHh--hHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 510 THEERMEKVDKICVMARSSPF--DKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 510 ~~~~~~~~~~~~~v~ar~sP~--~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
.. ..|. -=..+++.+.-..+.+.|+||+.+|..+-+.|++-..
T Consensus 100 --------------~~-~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 --------------DC-RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --------------CC-CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 01 1222 1112222222123568999999999999999988644
No 142
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.28 E-value=0.16 Score=56.38 Aligned_cols=98 Identities=20% Similarity=0.108 Sum_probs=59.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHH
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGD---------------NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHE 512 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD---------------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~ 512 (819)
-++.|++.+++++|+++|+++.++|+- ....+..+.+..|+... ...+...... +
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~~~~s----d 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICPHFPE----D 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeCCcCc----c
Confidence 367899999999999999999999983 23345566777776421 1111100000 0
Q ss_pred HHHHHhhhhceeccCCHhhHHHHHHHHHh----CCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 513 ERMEKVDKICVMARSSPFDKLLMVQCLKQ----KGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 513 ~~~~~~~~~~v~ar~sP~~K~~iV~~L~~----~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
+ ..+| .| |..++..+.+ ..+.+.|+||+.+|..+=+.|++-..
T Consensus 99 ~---------~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 N---------CSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred c---------CCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 0111 22 2223332222 23679999999999999898888643
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.15 E-value=0.11 Score=50.39 Aligned_cols=94 Identities=17% Similarity=0.027 Sum_probs=64.9
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
.-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ...++.+++.. +
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~------------------~ 99 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV------------------F 99 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc------------------c
Confidence 3467999999999999 57999999999999999999999874310 12223332211 1
Q ss_pred CCHhhHHHHHHHHHh---CCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 527 SSPFDKLLMVQCLKQ---KGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~---~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
..|. +.+.++. .-+.+.|+||..+|..+-++|.|-|.
T Consensus 100 ~KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 100 VKGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred cCCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 1221 3333333 34679999999999998777765553
No 144
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.43 E-value=1.5 Score=46.60 Aligned_cols=49 Identities=22% Similarity=0.292 Sum_probs=37.3
Q ss_pred EEEEeeCC----CCccHHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHcCCCC
Q 003452 442 GLVGIKDP----CRPGVKKAVEDCQYAGVNIKMITGDNVFT---AKAIATECGILK 490 (819)
Q Consensus 442 G~v~i~D~----lr~~v~~aI~~l~~aGI~v~mlTGD~~~t---a~~iA~~~GI~~ 490 (819)
|.+.-.+. +=|++.++|++|+++|++++++||.+..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 33444455 78899999999999999999999976655 455556678754
No 145
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.33 E-value=0.44 Score=46.46 Aligned_cols=82 Identities=15% Similarity=0.261 Sum_probs=60.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
..-|++++=+++++++|+++.++|.-++..+...++.+|+.. ++--..
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f--------------------------------i~~A~K 93 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF--------------------------------IYRAKK 93 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--------------------------------eecccC
Confidence 456788899999999999999999999999999999999975 333333
Q ss_pred HhhHHHHHHHHHhC---CCEEEEEcCCC-CCHHHhhhCC
Q 003452 529 PFDKLLMVQCLKQK---GHVVAVTRDGT-NDAPALKETD 563 (819)
Q Consensus 529 P~~K~~iV~~L~~~---g~~Va~~GDG~-ND~~aL~~Ad 563 (819)
|.-+ .+-+++++. -+.|+|+||-. .|+-+=+.|+
T Consensus 94 P~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 94 PFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred ccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 4333 344555555 57899999975 4775544443
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.30 E-value=0.31 Score=46.00 Aligned_cols=39 Identities=5% Similarity=0.060 Sum_probs=34.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHcC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD-NVFTAKAIATECG 487 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD-~~~ta~~iA~~~G 487 (819)
++.|++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
No 147
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.29 E-value=0.17 Score=51.20 Aligned_cols=113 Identities=20% Similarity=0.293 Sum_probs=72.2
Q ss_pred CCCccHHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHcCCCCC-------CC--CCCccceecccccccCCHHHHHHHh
Q 003452 449 PCRPGVKKAVEDCQYAGV-NIKMITGDNVFTAKAIATECGILKP-------GQ--DTSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI-~v~mlTGD~~~ta~~iA~~~GI~~~-------~~--~~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..||..- .. +.++.+.+. .+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~-----pyH~------- 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR-----PYHT------- 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee-----cCCC-------
Confidence 667999999999999996 9999999998888888887777531 00 011111111 1110
Q ss_pred hhhceeccCCHh-hHHHHHHHHHhCC-------CEEEEEcCCCCC-HHHhhhCCcceeeCCCChHH
Q 003452 519 DKICVMARSSPF-DKLLMVQCLKQKG-------HVVAVTRDGTND-APALKETDIGLSMGIQGTEV 575 (819)
Q Consensus 519 ~~~~v~ar~sP~-~K~~iV~~L~~~g-------~~Va~~GDG~ND-~~aL~~AdvGIamg~~gt~~ 575 (819)
-.=+.+|.|. =|..++..++..+ +.+.++|||.|| ||+++...--+||-..|-..
T Consensus 152 --~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 152 --QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred --CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0013333332 4777776665432 378999999999 77877777777776555443
No 148
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.17 E-value=0.48 Score=46.84 Aligned_cols=81 Identities=15% Similarity=0.091 Sum_probs=62.0
Q ss_pred eCCCCccHHHHHHHHHhcCCc--EEEEcCC-------CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVN--IKMITGD-------NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~--v~mlTGD-------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
++.+-|+..+.+++|++.+.. |.++|-- +...|..+++.+||..-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 466788999999999999875 9999986 48899999999998630
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCC-CCHHH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQK-----GHVVAVTRDGT-NDAPA 558 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~-----g~~Va~~GDG~-ND~~a 558 (819)
.+....|.-..++.+.++.+ -+.++|+||-. .|+-+
T Consensus 111 -----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 111 -----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 13345676666788888765 56799999964 45544
No 149
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.15 E-value=0.63 Score=59.38 Aligned_cols=127 Identities=12% Similarity=0.226 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.||+.+.+++|+++|+++.++|+-....+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~~----------------~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAFE----------------NLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECcccc----------------cCCCC
Confidence 46799999999999999999999999999999988999985210 12233333221 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeC--CCChHHHHhhcCEEEeCCChhH--HHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMG--IQGTEVAKESSDIVILDDNFAS--VARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg--~~gt~~ak~aaDivl~dd~f~~--i~~~i~ 597 (819)
|+-=....+.+.-..+.+.|+||..+|+.+-+.|++- |.+. ....+.....+|+++. ++.. +.+++.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~el~~~~~~~ 292 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHHCCHHHHHh
Confidence 3222333444443456789999999999999999883 2222 1122344456777776 4444 444443
No 150
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.10 E-value=0.32 Score=50.48 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=65.6
Q ss_pred eeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC---CCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 446 IKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECG---ILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 446 i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~G---I~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
++-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +... +++ -|. ..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~~-~fd-------------~~ 148 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FSG-YFD-------------TT 148 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cce-EEE-------------eC
Confidence 345799999999999999999999999988877776655542 2110 000 000 00
Q ss_pred eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
+...-.|+-=..+.+.+.-..+.+.|+||...|+.|=++|++-...
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1222333333444444443346799999999999999999986543
No 151
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.05 E-value=0.18 Score=53.21 Aligned_cols=68 Identities=18% Similarity=0.148 Sum_probs=49.4
Q ss_pred ccCCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhC--------CcceeeCCCChHHHHhhcCEEEeCCChhHH
Q 003452 525 ARSSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKET--------DIGLSMGIQGTEVAKESSDIVILDDNFASV 592 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~A--------dvGIamg~~gt~~ak~aaDivl~dd~f~~i 592 (819)
.+..+.+|...++.+.++ ...++|+||+.||.+|++.+ ..|++|+ .+ ..+..|++++. +...+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 344566898888877654 34789999999999999998 4788885 33 23566888876 56666
Q ss_pred HHHHH
Q 003452 593 ARVLR 597 (819)
Q Consensus 593 ~~~i~ 597 (819)
...+.
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 55553
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.74 E-value=0.59 Score=46.26 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=32.3
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH------------HHHHHHHHHcCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV------------FTAKAIATECGIL 489 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~------------~ta~~iA~~~GI~ 489 (819)
+-||+.++++.|+++|+++.++|.-+. ..+..+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 349999999999999999999997543 2456677888874
No 153
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=91.58 E-value=2.3 Score=50.38 Aligned_cols=52 Identities=21% Similarity=0.225 Sum_probs=38.3
Q ss_pred ccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcE---------EEEcCCCHHHHHHHHHHcCCC
Q 003452 435 EDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNI---------KMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 435 e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v---------~mlTGD~~~ta~~iA~~~GI~ 489 (819)
-.+.+++=.=.++--.|.++++.++.| |-+| .++-|++.-.=..=|+++||.
T Consensus 595 l~gkt~V~TGtL~~~sR~eak~~le~l---Gakv~~SVSkktD~vvaG~~aGSKl~kA~eLgv~ 655 (667)
T COG0272 595 LAGKTFVLTGTLEGMSRDEAKALLEAL---GAKVSGSVSKKTDYVVAGENAGSKLAKAQELGVK 655 (667)
T ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHc---CCEEeceecccccEEEEcCCCChHHHHHHHcCCe
Confidence 355666555456778899988888877 4333 577899988888889999975
No 154
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.42 E-value=0.26 Score=50.92 Aligned_cols=98 Identities=10% Similarity=0.092 Sum_probs=64.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.||+.+.++.| ++++.++|+.....+...-+..|+...- ...++.+.+.. ..+-
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F----~~~v~~~~~~~----------------~~KP 143 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF----PDKLFSGYDIQ----------------RWKP 143 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC----cceEeeHHhcC----------------CCCC
Confidence 35678999999998 4999999999988888888888886531 01233332211 0112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
.|+-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22222233333332335689999999999999999987653
No 155
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.28 E-value=0.25 Score=50.58 Aligned_cols=97 Identities=18% Similarity=0.096 Sum_probs=56.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFT--AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t--a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
-++.|++.+.++.|++.|+++.++|...... ........|+...- ..++...+. -..
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~~----------------~~~ 151 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----DAVVESCLE----------------GLR 151 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----CEEEEeeec----------------CCC
Confidence 3678999999999999999999999865432 22222233432210 111111110 011
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
+-.|+-=..+.+.+.-..+.+.|+||...|+.+=++|++-
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 2223222233333333345688899999999999998884
No 156
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.16 E-value=0.47 Score=52.24 Aligned_cols=91 Identities=9% Similarity=-0.031 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE----CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~----~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
++.+++.++++.|++.|+.+.++|.-+...|..+-+. +|+...- ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f------------------------------~~ 80 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF------------------------------DA 80 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe------------------------------eE
Confidence 4578999999999999999999999999999998888 7765421 00
Q ss_pred ccCCHhhHHHHHHHHHh----CCCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 525 ARSSPFDKLLMVQCLKQ----KGHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~----~g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
....+..|...++.+.+ .-..++|+||...|..+.+.+...+.+-
T Consensus 81 ~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 81 RSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 01112334444433322 2467999999999999999988876544
No 157
>PLN03017 trehalose-phosphatase
Probab=89.76 E-value=2.3 Score=47.38 Aligned_cols=34 Identities=9% Similarity=0.113 Sum_probs=30.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA 483 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA 483 (819)
.+-++..++|++|. .|+.+.++||+.......+.
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 36688999999999 78999999999999999873
No 158
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.58 E-value=0.71 Score=46.89 Aligned_cols=97 Identities=11% Similarity=0.103 Sum_probs=57.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE-CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~-~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.++++.|++.|+++.++|.-+.......-.. .|+... ...++...+.. ...-
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~~----------------~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDLG----------------MRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEecccC----------------CCCC
Confidence 4789999999999999999999999776654433222 233221 01111111110 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.|+-=..+++.+.-..+.+.++||...|+.+=++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 222222333333333456899999999999888888853
No 159
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=89.53 E-value=1.9 Score=42.05 Aligned_cols=103 Identities=18% Similarity=0.192 Sum_probs=69.5
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHH---HHHc-----CCCCCCCCCCccceecccc-cccCCHHHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI---ATEC-----GILKPGQDTSTGAVLEGEE-FRNYTHEERMEK 517 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~i---A~~~-----GI~~~~~~~~~~~vi~g~~-~~~~~~~~~~~~ 517 (819)
+|-.++++.+..+..++.|++++.+|++..--|... -.+. +++. +.+.+.... +..+..|
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~rE----- 93 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHRE----- 93 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhcc-----
Confidence 478999999999999999999999999986544332 2222 4433 223333221 1112111
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQK-----GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~-----g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
+..+-.-+.|...++.++.. ...++..|...+|+.+-++++|-
T Consensus 94 -----vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 -----VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred -----ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44554556898888888864 45677778889999999887764
No 160
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=89.52 E-value=2.3 Score=43.00 Aligned_cols=53 Identities=21% Similarity=0.318 Sum_probs=44.0
Q ss_pred EEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH---cCCCCC
Q 003452 439 TLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE---CGILKP 491 (819)
Q Consensus 439 ~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~---~GI~~~ 491 (819)
.+-|.+-++|..-|++.+|++.|++++.+|+.+|.-..+.-+.+.++ ||+.-.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ 68 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS 68 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc
Confidence 35588999999999999999999999999999998877776666554 676543
No 161
>PRK10444 UMP phosphatase; Provisional
Probab=89.35 E-value=2 Score=45.45 Aligned_cols=48 Identities=17% Similarity=0.272 Sum_probs=40.3
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH---cCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE---CGIL 489 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~---~GI~ 489 (819)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44555667889999999999999999999999998888777776 5774
No 162
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=89.07 E-value=1.3 Score=55.00 Aligned_cols=51 Identities=10% Similarity=0.047 Sum_probs=37.7
Q ss_pred cCcEEEEEEEeeCCCCccHHHHHHHH-HhcCCcEEEEcCCCHHHHHHHHHHc
Q 003452 436 DNLTLLGLVGIKDPCRPGVKKAVEDC-QYAGVNIKMITGDNVFTAKAIATEC 486 (819)
Q Consensus 436 ~~l~~lG~v~i~D~lr~~v~~aI~~l-~~aGI~v~mlTGD~~~ta~~iA~~~ 486 (819)
-|.|++-.....-.+-++..+++++| ++.|+.|.++||+...+....-..+
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45555533322335667899999996 7889999999999999998876543
No 163
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=88.37 E-value=3.6 Score=43.46 Aligned_cols=48 Identities=10% Similarity=0.046 Sum_probs=39.6
Q ss_pred EEeeCCCCccHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCCCC
Q 003452 444 VGIKDPCRPGVKKAVEDCQYAGVNIKMITG---DNVFTAKAIATECGILKP 491 (819)
Q Consensus 444 v~i~D~lr~~v~~aI~~l~~aGI~v~mlTG---D~~~ta~~iA~~~GI~~~ 491 (819)
+.-.+.+-|++.++|++|++.|++++++|| ..........+++|+...
T Consensus 12 l~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 12 MYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred eEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 334456667999999999999999999996 778888888888998654
No 164
>PLN02645 phosphoglycolate phosphatase
Probab=88.16 E-value=0.63 Score=51.00 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=38.7
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHcCCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA---TECGILK 490 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA---~~~GI~~ 490 (819)
|.+--.+.+=|++.++++.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 334444566799999999999999999999999977766666 5677753
No 165
>PLN02580 trehalose-phosphatase
Probab=87.81 E-value=0.79 Score=51.36 Aligned_cols=63 Identities=17% Similarity=0.225 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHhC-C-----C-EEEEEcCCCCCHHHhhh-----CCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G-----H-VVAVTRDGTNDAPALKE-----TDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g-----~-~Va~~GDG~ND~~aL~~-----AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
-+|...|+.+.+. | . .++++||+.||..|++. +++||+|| ++.. ...|++.+. +-..+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHHHHHHHHH
Confidence 3899999888665 2 1 25899999999999996 68999999 5543 225777776 5555555554
No 166
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=87.73 E-value=1.4 Score=43.91 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=61.2
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 529 (819)
+-|+ .+.++.+++. +++.++||.....+..+-+..|+... ...++...+.. ..+-.|
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-----fd~i~~~~~~~----------------~~KP~p 145 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-----FDAVVAADDVQ----------------HHKPAP 145 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-----ceEEEehhhcc----------------CCCCCh
Confidence 3454 6899999875 89999999999999999999998653 12233332221 112223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 530 ~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
+-=....+.+.-..+.+.++||..+|+.+=+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 146 DTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 222333333433334578899999999999998874
No 167
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=86.85 E-value=0.46 Score=42.02 Aligned_cols=20 Identities=35% Similarity=0.481 Sum_probs=17.4
Q ss_pred ceEEEecchHHHHHHhhhhc
Q 003452 360 TSHVHWKGAAEMILAMCSSY 379 (819)
Q Consensus 360 ~~~~~~KGa~e~il~~c~~~ 379 (819)
.+.+++|||||.|+++|+++
T Consensus 72 ~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 72 KYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred EEEEEcCCChHHHHHhcCCC
Confidence 46779999999999999863
No 168
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.31 E-value=1.9 Score=43.51 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=54.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+....... ...++. ++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~-f~~i~~----------------------~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA-FSEVLM----------------------CGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc-ccEEEE----------------------eccC
Confidence 47899999999999975 56677765554444455566664211000 011111 1111
Q ss_pred HhhHHHHHH-HHHhCC-CEEEEEcCCCCCHHHhhhC--Ccce
Q 003452 529 PFDKLLMVQ-CLKQKG-HVVAVTRDGTNDAPALKET--DIGL 566 (819)
Q Consensus 529 P~~K~~iV~-~L~~~g-~~Va~~GDG~ND~~aL~~A--dvGI 566 (819)
.. |..+++ .+++.| +.++|+||..+|+.+-++| ++-.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 11 223332 333334 4578999999999999999 8853
No 169
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=86.25 E-value=1.8 Score=43.21 Aligned_cols=97 Identities=10% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.+++.+.+++|+ .++.++|.-+...+..+.+..|+...- ..++.+.+.... ...++-.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~------------~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----DGIFCFDTANPD------------YLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----CeEEEeecccCc------------cCCCCCC
Confidence 47789999999997 479999999999999999999986421 122222221100 0001223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=..+++.+....+.+.|+||...|..+=+.|++.
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 3322344444444456788999999999888888764
No 170
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=82.40 E-value=1.4e+02 Score=37.07 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=37.5
Q ss_pred ccCCEEEEecCCeeccceEEEe-ccceeEecccccCCCceeeecCCCC---Ce-EeeccccccceE
Q 003452 237 VVGDVICLKIGDQVPANGLFLD-GHSLQVDESSMTGESDHVEVNSSQN---PF-LFSGTKVADGYA 297 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~-g~~l~VDES~LTGES~pv~k~~~~~---~~-l~sGt~v~~G~~ 297 (819)
.-|....+..-+.+|-|-+++. |+.+-+|=-.+.|++. +.=..-.| |. -..|..|..|+.
T Consensus 249 r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~-vdes~lTGEs~Pv~k~~Gd~V~aGt~ 313 (741)
T PRK11033 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFAS-FDESALTGESIPVERATGEKVPAGAT 313 (741)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEE-eecccccCCCCCEecCCCCeeccCCE
Confidence 4577888888899999988884 5566677777777642 22111011 21 245677777653
No 171
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=82.06 E-value=18 Score=42.38 Aligned_cols=121 Identities=13% Similarity=0.003 Sum_probs=70.6
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCC---CCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE-CGILKP---GQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~-~GI~~~---~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+++++.+. +++.|. ++++|+-...-++.+|++ +|++.- ..+....-.++|. +-.
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 56665554 456674 599999999999999988 898731 0000001111221 111
Q ss_pred --cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH-HH--HhhcCEEEeCCChhHH
Q 003452 526 --RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE-VA--KESSDIVILDDNFASV 592 (819)
Q Consensus 526 --r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~-~a--k~aaDivl~dd~f~~i 592 (819)
.+.-++|.+-++..........+-||..||.|+|+.||-+.+++.+.-. .. +--..+|..|..+..-
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCC
Confidence 1344678777764332111124569999999999999999999842211 11 1133566666555443
No 172
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=81.55 E-value=3.7 Score=42.61 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=72.2
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.||+.+.+++|++.|+.+.+.|+-....+..+.+..|+.... ..++++.+.. -.+
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f-----~~~v~~~dv~----------------~~K 142 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF-----DVIVTADDVA----------------RGK 142 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc-----chhccHHHHh----------------cCC
Confidence 3488999999999999999999999999999999999999998642 2333333321 112
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
-.|+-=..-.+.|.-....+.++.|..|.+.|-++|+.-+-
T Consensus 143 P~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 143 PAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 33443334444443344568888999999999999987543
No 173
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=79.41 E-value=3.7 Score=44.22 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=39.0
Q ss_pred CC-ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 450 CR-PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 450 lr-~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
+| |++.+++++|+++|+++.++|+-....+...-+++|+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 67 9999999999999999999999999999999999999853
No 174
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=79.26 E-value=17 Score=38.96 Aligned_cols=46 Identities=13% Similarity=0.165 Sum_probs=34.2
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHH---HHHHcCCCC
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA---IATECGILK 490 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~---iA~~~GI~~ 490 (819)
.-.+.+-|++.+++++|++.|+++.++|+....+... --+++|+..
T Consensus 14 ~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 14 WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3356677889999999999999999999965433333 335678754
No 175
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=79.26 E-value=2 Score=44.84 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=57.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVF---TAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~---ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
++.=|++.+.++.+++.|++|..+||++.. .+..=-++.|+... ..+++.+..-..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-----~~l~lr~~~~~~---------------- 172 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-----DHLILRPDKDPS---------------- 172 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-----SCGEEEEESSTS----------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-----chhccccccccc----------------
Confidence 455688999999999999999999998643 22233455676542 233333322100
Q ss_pred ccCCHhhHHHHHHHHHhCC-CEEEEEcCCCCCHHH
Q 003452 525 ARSSPFDKLLMVQCLKQKG-HVVAVTRDGTNDAPA 558 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g-~~Va~~GDG~ND~~a 558 (819)
.....+.|...-+.++++| ++++++||-.+|...
T Consensus 173 ~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 173 KKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp S------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 0112345888888888885 577889999999754
No 176
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=78.75 E-value=8.2 Score=41.15 Aligned_cols=87 Identities=21% Similarity=0.198 Sum_probs=55.5
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHH----HHHHHHHHcCCCCCCCCCCccceecccc-cccCCHHHHHHHhhhh
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVF----TAKAIATECGILKPGQDTSTGAVLEGEE-FRNYTHEERMEKVDKI 521 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~----ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~~~~~~~~~~~~~~~~ 521 (819)
+.|.=|++.+..+.+++.|++|+.+||+... |..++ ++.|.... ..+++.+.. -+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-----~~LiLR~~~D~~-------------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-----EKLILKDPQDNS-------------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-----ceeeecCCCCCc--------------
Confidence 5577789999999999999999999999854 44444 33576532 223333221 00
Q ss_pred ceeccCCHhhHHHHHHHHHhCC-CEEEEEcCCCCCH
Q 003452 522 CVMARSSPFDKLLMVQCLKQKG-HVVAVTRDGTNDA 556 (819)
Q Consensus 522 ~v~ar~sP~~K~~iV~~L~~~g-~~Va~~GDG~ND~ 556 (819)
.....+.|...-+.+.++| ++++.+||-.+|.
T Consensus 203 ---~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 ---AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred ---cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 0011234555555555665 4677899999986
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=78.58 E-value=5.6 Score=37.42 Aligned_cols=32 Identities=16% Similarity=0.076 Sum_probs=28.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHH
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTA 479 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta 479 (819)
+++.+++.++++++++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67889999999999999999999999986543
No 178
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=77.02 E-value=1 Score=40.55 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=33.5
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHcCCCC
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA---TECGILK 490 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA---~~~GI~~ 490 (819)
...+.+=|++.++++.|+++|++++++|.....+...++ +.+|+..
T Consensus 10 ~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 10 YNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp EETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred EeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 345677799999999999999999999988755544444 6678764
No 179
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=75.06 E-value=10 Score=40.47 Aligned_cols=44 Identities=18% Similarity=0.333 Sum_probs=37.4
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~ 485 (819)
|.+.-.+.+=|++.++|+.|+++|++++.+|.-...+...++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 67777888999999999999999999999998877777655444
No 180
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=73.51 E-value=8.4 Score=38.61 Aligned_cols=97 Identities=23% Similarity=0.268 Sum_probs=60.0
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCH---HHHHHHhhhh--cee
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTH---EERMEKVDKI--CVM 524 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~---~~~~~~~~~~--~v~ 524 (819)
+.|++.+++..++++|++++|+|- |-||... -.++.+|..+++ +.+.+.--++ ..+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg--------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG--------YFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc--------CccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 468999999999999999999995 4455432 123333332221 1111111111 134
Q ss_pred ccCCHhh--------HHHHHHHHHhCC---CEEEEEcCCCCCHHHhhhCCcc
Q 003452 525 ARSSPFD--------KLLMVQCLKQKG---HVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 525 ar~sP~~--------K~~iV~~L~~~g---~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|.-.|++ ...+.+.+++.+ ....||||-..|..+=..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 5445543 344556666654 6788999999999988888776
No 181
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=71.82 E-value=6.3 Score=42.53 Aligned_cols=42 Identities=14% Similarity=0.058 Sum_probs=38.0
Q ss_pred CC-ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 450 CR-PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 450 lr-~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
+| |++.+++++|+++|+++.++|+.+...+..+.+..|+...
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 46 8999999999999999999998888888999999999753
No 182
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=71.27 E-value=8.1 Score=40.43 Aligned_cols=92 Identities=16% Similarity=0.072 Sum_probs=54.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++-||+.++++.|++. +++.++|.-+.. .+..|+...- ..++...+. .+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f-----d~i~~~~~~------------------~~~K 163 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF-----EFVLRAGPH------------------GRSK 163 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh-----ceeEecccC------------------CcCC
Confidence 5668999999999875 899999886654 1456664321 112211111 1112
Q ss_pred Hh--hHHHHHHHHHhCCCEEEEEcCC-CCCHHHhhhCCcceeeC
Q 003452 529 PF--DKLLMVQCLKQKGHVVAVTRDG-TNDAPALKETDIGLSMG 569 (819)
Q Consensus 529 P~--~K~~iV~~L~~~g~~Va~~GDG-~ND~~aL~~AdvGIamg 569 (819)
|. -=....+.+.-..+.+.|+||. ..|+.+=+.|++-....
T Consensus 164 P~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 164 PFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred CcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 22 1112222332234569999999 59999989998765443
No 183
>PLN02151 trehalose-phosphatase
Probab=69.07 E-value=50 Score=36.83 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=41.9
Q ss_pred hHHHHHHHHHhC-C------CEEEEEcCCCCCHHHhhhC-----CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G------HVVAVTRDGTNDAPALKET-----DIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g------~~Va~~GDG~ND~~aL~~A-----dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. + ..+.++||...|-.|++.. ++||.+| .+.. ...|++.|. +-..+...+.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 788888887654 2 2488999999999998853 6777776 2211 225788776 5555555543
No 184
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=68.40 E-value=36 Score=37.04 Aligned_cols=64 Identities=16% Similarity=0.194 Sum_probs=39.5
Q ss_pred eeccCCHhhHHHHHHHHHh--CCCEEEEEcCC-CCCHH---HhhhCCcceeeCCCCh---HHHHhhcCEEEeC
Q 003452 523 VMARSSPFDKLLMVQCLKQ--KGHVVAVTRDG-TNDAP---ALKETDIGLSMGIQGT---EVAKESSDIVILD 586 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG-~ND~~---aL~~AdvGIamg~~gt---~~ak~aaDivl~d 586 (819)
-|.-|||.-=.++++...- .|+.|+++|-| .-=.| .|.+++.-+.+-.+.+ ..+-..||+++.-
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 3556777666666655532 38999999997 44444 4666666665542222 2334568999873
No 185
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=68.07 E-value=6.5 Score=38.64 Aligned_cols=85 Identities=12% Similarity=0.139 Sum_probs=53.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++ ++.++|.-+........+..|+...- ..++.+++.. ...-.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~----------------~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF-----DRAFSVDTVR----------------AYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH-----hhhccHhhcC----------------CCCCC
Confidence 58899999998 36789998888888888888886421 1122222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhh
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKE 561 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~ 561 (819)
|+-=....+.+.-..+.+.|+||...|+.+-++
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 322233444443344669999999999876554
No 186
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=67.88 E-value=10 Score=37.49 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=59.8
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV----FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~----~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+++=+++.|..-++.|=.+..+||+.. .+++.+|+...|.+. ... +|+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m-----~pv-----------------------~f~ 166 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM-----NPV-----------------------IFA 166 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC-----cce-----------------------eec
Confidence 455678889999999999999999874 456667777777543 122 333
Q ss_pred cCCHh-hHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceee
Q 003452 526 RSSPF-DKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSM 568 (819)
Q Consensus 526 r~sP~-~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIam 568 (819)
...|. .+..-...+|+++-.+ .-||.-||..|-|+|++ ||-+
T Consensus 167 Gdk~k~~qy~Kt~~i~~~~~~I-hYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 167 GDKPKPGQYTKTQWIQDKNIRI-HYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred cCCCCcccccccHHHHhcCceE-EecCCchhhhHHHhcCccceeE
Confidence 33331 1122244566665444 44999999999999986 4543
No 187
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=67.06 E-value=1.1e+02 Score=31.18 Aligned_cols=15 Identities=7% Similarity=0.231 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHH
Q 003452 786 ACIGFAAASWPIGWL 800 (819)
Q Consensus 786 ~~~~~~~~~~~~~~~ 800 (819)
+.+++|++.+++.+.
T Consensus 182 ~~iiig~i~~~~~~~ 196 (206)
T PF06570_consen 182 VYIIIGVIAFALRFY 196 (206)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345666666665443
No 188
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=66.10 E-value=3.7 Score=40.36 Aligned_cols=45 Identities=13% Similarity=-0.045 Sum_probs=39.5
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~ 490 (819)
.+.=..||++.+.+++|.+. +++.+.|-.....|..+.+.++...
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~ 82 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG 82 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC
Confidence 44446899999999999987 9999999999999999999988653
No 189
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=62.98 E-value=31 Score=40.61 Aligned_cols=40 Identities=18% Similarity=0.291 Sum_probs=32.6
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH------------HHHHHHHHHcCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV------------FTAKAIATECGIL 489 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~------------~ta~~iA~~~GI~ 489 (819)
+-|+++++++.|+++|+++.++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 458999999999999999999997444 3466777778874
No 190
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.82 E-value=60 Score=33.11 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=37.0
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
.=++-|++.++++.+++. +++.++|--....+....+++|+...
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~ 140 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY 140 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh
Confidence 346778899999999888 99999999888888889999997653
No 191
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.45 E-value=63 Score=34.89 Aligned_cols=62 Identities=16% Similarity=0.250 Sum_probs=38.8
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcC-CCCCHH---HhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRD-GTNDAP---ALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GD-G~ND~~---aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|+++|- |+-=.| +|.+++.-+.+-.+.+. ..-..||+++.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 566777765555555432 3899999999 665555 45566555555323332 23467999887
No 192
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=60.07 E-value=26 Score=36.93 Aligned_cols=134 Identities=19% Similarity=0.283 Sum_probs=67.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------Cccce---ecccccccCCHHHHHHH
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-------STGAV---LEGEEFRNYTHEERMEK 517 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-------~~~~v---i~g~~~~~~~~~~~~~~ 517 (819)
-.+|+++.+.++.|++.+|.+.++|+-=-.....+-++-|...++... +..-. +.|+-...+...+
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~---- 164 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNE---- 164 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHH----
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCc----
Confidence 368999999999999999999999988888888887887876653210 00001 1111111111000
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC---CcceeeC--CCC----hHHHHhhcCEEEeCCC
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET---DIGLSMG--IQG----TEVAKESSDIVILDDN 588 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A---dvGIamg--~~g----t~~ak~aaDivl~dd~ 588 (819)
.+. +.+| .-+.++. ...|...||..-|+.|-.-. +.-+.+| ... -+.=+++-|||+.+|.
T Consensus 165 ----~~l-~~~~-----~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 165 ----SAL-EDSP-----YFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp ----HHH-TTHH-----HHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred ----ccc-cCch-----HHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 000 0011 1122332 35688889999999986554 2222222 112 2244667899999886
Q ss_pred hhHHHHHH
Q 003452 589 FASVARVL 596 (819)
Q Consensus 589 f~~i~~~i 596 (819)
=-.++..+
T Consensus 234 tm~v~~~i 241 (246)
T PF05822_consen 234 TMDVPNAI 241 (246)
T ss_dssp B-HHHHHH
T ss_pred CchHHHHH
Confidence 44444433
No 193
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=59.79 E-value=1.4e+02 Score=27.93 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=38.9
Q ss_pred HHHHHHHhCCCEEEEEcCCCC--CHHHhhhCCcceeeCCC-ChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHH
Q 003452 534 LMVQCLKQKGHVVAVTRDGTN--DAPALKETDIGLSMGIQ-GTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLI 610 (819)
Q Consensus 534 ~iV~~L~~~g~~Va~~GDG~N--D~~aL~~AdvGIamg~~-gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i 610 (819)
.+++.+ .+-+.+...|-|.| |..++++.+|-++=... .++...|.+ ..+--..-+.++.+..|+..++
T Consensus 53 ~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~~~aVAE~a--------~~T~e~~~~~~~~~~~ni~~~l 123 (133)
T PF00389_consen 53 EVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYNAEAVAEHA--------GYTDEARERMAEIAAENIERFL 123 (133)
T ss_dssp HHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTTHHHHHHHH--------TGBHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEeCCcCCcchhccc--------hhHHHHHHHHHHHHHHHHHHHH
Confidence 445555 33467888899998 88999999998875522 222232333 3333333444556666666543
No 194
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.58 E-value=81 Score=34.04 Aligned_cols=62 Identities=15% Similarity=0.278 Sum_probs=37.4
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|+++|-+.. =+.+|...+.-+.+..+.|. ..-..||+++.
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 456777666666665532 3899999998765 23455555555544433332 23456888876
No 195
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.46 E-value=73 Score=34.39 Aligned_cols=63 Identities=13% Similarity=0.218 Sum_probs=35.8
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEeC
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVILD 586 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~d 586 (819)
|.-|||.-=.++++...- .|+.|+++|-+.. =+.+|...+.-+.+..+.|. ..-..||+++.-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 207 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVA 207 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 456677665555554432 3899999999765 23345444444443323332 234568888763
No 196
>PLN02423 phosphomannomutase
Probab=58.85 E-value=14 Score=39.05 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=33.1
Q ss_pred hhHHHHHHHHHhCCCEEEEEcC----CCCCHHHhhh-CCcceeeC
Q 003452 530 FDKLLMVQCLKQKGHVVAVTRD----GTNDAPALKE-TDIGLSMG 569 (819)
Q Consensus 530 ~~K~~iV~~L~~~g~~Va~~GD----G~ND~~aL~~-AdvGIamg 569 (819)
-+|..-++.|+ ..+.|++.|| |.||.+||+. -=+|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 38999999999 6667888899 8999999996 66788876
No 197
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.48 E-value=80 Score=34.06 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=35.3
Q ss_pred eccCCHhhHHHHHHHHH--hCCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLK--QKGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~--~~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++... -.|+.|+++|.+.. =+.+|...+--+.+..+.|. ..-..||+++.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~ 206 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVA 206 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 45566665555555443 23899999999765 23455444444443333342 22346888876
No 198
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=54.37 E-value=30 Score=36.05 Aligned_cols=61 Identities=18% Similarity=0.213 Sum_probs=29.5
Q ss_pred cCCHhhHHHHHHHHHhC-C------CEEEEEcCCCCCHHHhhhC------CcceeeCCCChHHHHhhcCEEEeC
Q 003452 526 RSSPFDKLLMVQCLKQK-G------HVVAVTRDGTNDAPALKET------DIGLSMGIQGTEVAKESSDIVILD 586 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~-g------~~Va~~GDG~ND~~aL~~A------dvGIamg~~gt~~ak~aaDivl~d 586 (819)
|..-..|...++.+-+. + ..+.++||...|-.|++.. ++++.++......-..+|++-+.|
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 33334588888877665 3 2688999999999998753 667777732222233455555543
No 199
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=53.81 E-value=55 Score=35.01 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=33.0
Q ss_pred eeCCCCccHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHcC
Q 003452 446 IKDPCRPGVKKAVEDCQYA-GVNIKMITGDNVFTAKAIATECG 487 (819)
Q Consensus 446 i~D~lr~~v~~aI~~l~~a-GI~v~mlTGD~~~ta~~iA~~~G 487 (819)
...++-++..+.++.|... ...++++||...........--|
T Consensus 37 ~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~ 79 (266)
T COG1877 37 EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPG 79 (266)
T ss_pred cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCC
Confidence 3456777889999999887 44699999999999888766333
No 200
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.29 E-value=94 Score=33.61 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=37.9
Q ss_pred eeccCCHhhHHHHHHHHH--hCCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEeC
Q 003452 523 VMARSSPFDKLLMVQCLK--QKGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVILD 586 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~--~~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~d 586 (819)
-|.-|||.-=.++++... -.|..|+++|-|.. =+.+|...+.-+.+..+.|. ..-..||+++.-
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 355667765555555443 23899999999866 23455555555544433332 344678998873
No 201
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.05 E-value=56 Score=35.52 Aligned_cols=63 Identities=11% Similarity=0.238 Sum_probs=37.6
Q ss_pred eeccCCHhhHHHHHHHHH--hCCCEEEEEcC-CCCCHH---HhhhCCcceeeCCC---ChHHHHhhcCEEEe
Q 003452 523 VMARSSPFDKLLMVQCLK--QKGHVVAVTRD-GTNDAP---ALKETDIGLSMGIQ---GTEVAKESSDIVIL 585 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~--~~g~~Va~~GD-G~ND~~---aL~~AdvGIamg~~---gt~~ak~aaDivl~ 585 (819)
-|.-|||.-=.++++... -.|..|+++|- +.-=.| .|.+++.-+.+-.+ ..+.+-..||+++.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 355677766555555542 23899999994 444433 45666666665521 22334456898876
No 202
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.40 E-value=1.1e+02 Score=32.83 Aligned_cols=63 Identities=16% Similarity=0.236 Sum_probs=39.3
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEeC
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVILD 586 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~d 586 (819)
|.-|||.-=.++++...- .|+.|+++|.+.. =+-+|.+.+.-+.+..+.|. ..-..||+++.-
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 556777776666666542 3899999999765 24456555555555433332 223568888763
No 203
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=50.88 E-value=17 Score=33.55 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=46.3
Q ss_pred HHHHhhhCCceeeeeecccCCcccccchhhhhhh-cccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCc-EEEEcCCCHH
Q 003452 400 IIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKL-IEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVN-IKMITGDNVF 477 (819)
Q Consensus 400 ~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~-~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~-v~mlTGD~~~ 477 (819)
.+..+.+.|+++..+.-+.-.-.+......-.+. ..-|+..+. -+.+.+.+.+++|.+.|++ +|+.+|...+
T Consensus 19 v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~ 92 (116)
T PF13380_consen 19 VLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQPGAESE 92 (116)
T ss_dssp HHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-TTS--H
T ss_pred HHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEEcchHHH
Confidence 4455555888888876544221111100000111 112332222 3456789999999999997 9999999999
Q ss_pred HHHHHHHHcCCC
Q 003452 478 TAKAIATECGIL 489 (819)
Q Consensus 478 ta~~iA~~~GI~ 489 (819)
.+...|++.|+.
T Consensus 93 ~~~~~a~~~gi~ 104 (116)
T PF13380_consen 93 ELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHTT-E
T ss_pred HHHHHHHHcCCE
Confidence 999999998874
No 204
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.94 E-value=1.2e+02 Score=32.83 Aligned_cols=63 Identities=13% Similarity=0.217 Sum_probs=38.1
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEeC
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVILD 586 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~d 586 (819)
|.-|||.-=.++++...- .|+.|+++|-+.. =+.+|...+.-+.+..+.|. ..-..||+++.-
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 455677665555555432 3899999999865 24455555555555434443 234668888763
No 205
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.80 E-value=1.3e+02 Score=32.85 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=36.2
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhC----CcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKET----DIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~A----dvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++..+- .|+.|+++|-+.. =+-+|.+. +.-+.+..+.|. ..-..||+++.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVA 210 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 455777766666665542 3899999999765 23344433 333333323333 23467898887
No 206
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.56 E-value=1.2e+02 Score=32.70 Aligned_cols=63 Identities=16% Similarity=0.190 Sum_probs=36.8
Q ss_pred eeccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 523 VMARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
-|.-|||.-=.++++...- .|+.|+++|-+.. =+.+|...+--+.+..+.|. ..-..||+++.
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~ 207 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIV 207 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEE
Confidence 4566788766666665542 3899999998754 23344434333333323332 24467888876
No 207
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=48.31 E-value=53 Score=36.50 Aligned_cols=102 Identities=18% Similarity=0.084 Sum_probs=63.4
Q ss_pred CccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc-C-------CCCCCCCCCccceecc----------cccccCCHH
Q 003452 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATEC-G-------ILKPGQDTSTGAVLEG----------EEFRNYTHE 512 (819)
Q Consensus 451 r~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~-G-------I~~~~~~~~~~~vi~g----------~~~~~~~~~ 512 (819)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ | +... ...++.+ ..|+....+
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y-----FD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY-----FDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh-----CcEEEeCCCCCcccCCCCceEEEeCC
Confidence 479999999999999999999999999999999986 6 3321 1223322 222222111
Q ss_pred H----HHH--HhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhh
Q 003452 513 E----RME--KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALK 560 (819)
Q Consensus 513 ~----~~~--~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~ 560 (819)
. ... .+++-.|++.=+-. .+-+.+...++.|+++||.. .|+-.-+
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~k 312 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSK 312 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhH
Confidence 0 000 02223355443332 34455566789999999976 4776554
No 208
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.52 E-value=1.3e+02 Score=32.47 Aligned_cols=64 Identities=16% Similarity=0.170 Sum_probs=37.1
Q ss_pred eeccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEeC
Q 003452 523 VMARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVILD 586 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~d 586 (819)
-|.-|||.-=.++++...- .|..|+++|.|.. =+.+|...+.-+.+-.+.|. ..-..||+++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 3556777776666666543 3899999999833 23344444333333222332 234678888763
No 209
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=47.49 E-value=99 Score=29.45 Aligned_cols=82 Identities=15% Similarity=0.171 Sum_probs=53.1
Q ss_pred HhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCc--EEEEcCCC---H-
Q 003452 403 GMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVN--IKMITGDN---V- 476 (819)
Q Consensus 403 ~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~--v~mlTGD~---~- 476 (819)
.+...|++|+-++...-+++- -+...+.+-..+|+-++-=.--+..++.++.|+++|.+ ++++-|-. .
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~------v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~ 97 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEF------IKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQ 97 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHH------HHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChh
Confidence 445789999888755433221 12233456677888777777777889999999999983 55566631 1
Q ss_pred --HHHHHHHHHcCCCC
Q 003452 477 --FTAKAIATECGILK 490 (819)
Q Consensus 477 --~ta~~iA~~~GI~~ 490 (819)
.....-++++|+..
T Consensus 98 d~~~~~~~l~~~Gv~~ 113 (134)
T TIGR01501 98 DFPDVEKRFKEMGFDR 113 (134)
T ss_pred hhHHHHHHHHHcCCCE
Confidence 11234578889653
No 210
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=47.03 E-value=67 Score=31.91 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=32.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEc-CCCHHHHHHHHHHcCCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMIT-GDNVFTAKAIATECGIL 489 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlT-GD~~~ta~~iA~~~GI~ 489 (819)
.+-|+++++++.|++.|+++.+.| -+.+.-|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 466999999999999999999999 58899999999999998
No 211
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=46.89 E-value=64 Score=29.89 Aligned_cols=82 Identities=15% Similarity=0.171 Sum_probs=55.8
Q ss_pred HhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cE-EEEcCCCHHHHH
Q 003452 403 GMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NI-KMITGDNVFTAK 480 (819)
Q Consensus 403 ~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v-~mlTGD~~~ta~ 480 (819)
-+...|++++-++-. .+.++ ......+.+-.++++-+......+.+++.++.|+++|. ++ +++-|..+..-.
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~-----~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~ 95 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEE-----IVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDY 95 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHH-----HHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHH
Confidence 456789998877644 22221 11223355667888888888899999999999999987 44 556665554445
Q ss_pred HHHHHcCCCC
Q 003452 481 AIATECGILK 490 (819)
Q Consensus 481 ~iA~~~GI~~ 490 (819)
+-.++.|+..
T Consensus 96 ~~~~~~G~d~ 105 (122)
T cd02071 96 ELLKEMGVAE 105 (122)
T ss_pred HHHHHCCCCE
Confidence 5667899764
No 212
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=45.79 E-value=1.2e+02 Score=32.94 Aligned_cols=74 Identities=28% Similarity=0.361 Sum_probs=43.6
Q ss_pred CcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHh----
Q 003452 466 VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQ---- 541 (819)
Q Consensus 466 I~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~---- 541 (819)
+..+|+-|...++....|+..+++- ++|- + -...|.|-+.=+..+++
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VPV----------iNgL-----t--------------D~~HP~Q~LADl~Ti~E~~g~ 150 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVPV----------INGL-----T--------------DEFHPCQALADLMTIKEHFGS 150 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCce----------Eccc-----c--------------cccCcHHHHHHHHHHHHhcCc
Confidence 5568888888888888888887753 2221 1 11234444333333333
Q ss_pred -CCCEEEEEcCCCCCH--HHhhhCCcceee
Q 003452 542 -KGHVVAVTRDGTNDA--PALKETDIGLSM 568 (819)
Q Consensus 542 -~g~~Va~~GDG~ND~--~aL~~AdvGIam 568 (819)
+|..++++|||.|=+ -++..|=.|+-+
T Consensus 151 l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 151 LKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred ccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 378999999995533 344445444444
No 213
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.60 E-value=75 Score=34.53 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=37.3
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC-C---HHHhh------hCCcceeeCCCCh--HHHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN-D---APALK------ETDIGLSMGIQGT--EVAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N-D---~~aL~------~AdvGIamg~~gt--~~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|+++|-+.. = +.+|. .|.|-++-. ... ...-..||+++.
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~ 212 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIA 212 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 455778765555555432 3899999999865 1 22343 355555554 222 234577999987
No 214
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=44.41 E-value=14 Score=31.97 Aligned_cols=20 Identities=30% Similarity=0.730 Sum_probs=15.5
Q ss_pred cCccccCCEEEE-ecCCeecc
Q 003452 233 IFEIVVGDVICL-KIGDQVPA 252 (819)
Q Consensus 233 ~~~LvvGDiV~l-~~Gd~VPa 252 (819)
-.+|.+||.|.+ +.||.||-
T Consensus 47 ~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 47 ELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HTT-BBT-EEEEEEETTTEEE
T ss_pred HcCCCCCCEEEEEECCCccce
Confidence 467999999999 78999994
No 215
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=42.02 E-value=52 Score=32.69 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=44.5
Q ss_pred eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHH-hhcCEEEeCCChhHHHHHHHHHHH
Q 003452 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAK-ESSDIVILDDNFASVARVLRWGRC 601 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak-~aaDivl~dd~f~~i~~~i~~gR~ 601 (819)
.+.=.++++=...++.+++.|- -+++|++. ..+.|+ .--..++...+-.++..++.++++
T Consensus 105 ~~~~~~~~e~~~~i~~~~~~G~-~viVGg~~------------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~ 165 (176)
T PF06506_consen 105 IYPYDSEEEIEAAIKQAKAEGV-DVIVGGGV------------------VCRLARKLGLPGVLIESGEESIRRALEEALR 165 (176)
T ss_dssp EEEESSHHHHHHHHHHHHHTT---EEEESHH------------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCC-cEEECCHH------------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHH
Confidence 4445668888888999998884 44557653 122222 234567777789999999999999
Q ss_pred HHHHHHH
Q 003452 602 VHTNIQK 608 (819)
Q Consensus 602 ~~~ni~k 608 (819)
+++..++
T Consensus 166 i~~~~~~ 172 (176)
T PF06506_consen 166 IARARRR 172 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887764
No 216
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=41.92 E-value=70 Score=35.11 Aligned_cols=154 Identities=20% Similarity=0.166 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhhhhhcccCcEEEEEEEeeCCCCccHH--HHHHHHHhcCCc
Q 003452 391 DNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQKKLIEDNLTLLGLVGIKDPCRPGVK--KAVEDCQYAGVN 467 (819)
Q Consensus 391 ~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~--~aI~~l~~aGI~ 467 (819)
+...+...+.++-+.+.|++=+.++.|..+....- ....-....+..| -+|+.---....--++ -.|-.|-..||-
T Consensus 147 eamveSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIG 225 (346)
T TIGR00612 147 EAMVQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIG 225 (346)
T ss_pred HHHHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCC
Confidence 44555666677777888988888877765421100 0000000011111 2344322222222233 347788888884
Q ss_pred --EEE-EcCCCHH---HHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHH---
Q 003452 468 --IKM-ITGDNVF---TAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQC--- 538 (819)
Q Consensus 468 --v~m-lTGD~~~---ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~--- 538 (819)
+++ +|+|+.+ .|..|-+.+|+.... ..++.-+ =|+|+. -|-..+++.
T Consensus 226 DTIRVSLT~dP~~EV~va~~IL~slglr~~g-----~~iiSCP------------------tCGR~~-~dl~~~~~~ve~ 281 (346)
T TIGR00612 226 DTIRVSLTDDPTHEVPVAFEILQSLGLRARG-----VEIVACP------------------SCGRTG-FDVEKVVRRVQE 281 (346)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHcCCCcCC-----CeEEECC------------------CCCCcC-CCHHHHHHHHHH
Confidence 444 7999855 456788889987642 2233222 244443 222233333
Q ss_pred -HHh--CCCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 539 -LKQ--KGHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 539 -L~~--~g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
|+. ..-.||+.|-=+|-..--++||+|||-|
T Consensus 282 ~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 282 ALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 332 2468999999999999999999999977
No 217
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.65 E-value=1.2e+02 Score=33.05 Aligned_cols=62 Identities=13% Similarity=0.187 Sum_probs=36.3
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|+++|-+.. =+-+|...+.-+.+..+.|. ..-..||+++.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 456777666666665532 3899999998754 23345444444433323332 23456898876
No 218
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=39.09 E-value=1e+02 Score=33.27 Aligned_cols=148 Identities=16% Similarity=0.187 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhhhCCceeeeeecccCCccc-ccch------------hhhhhhcccCcEEEEEEEeeCCCCccHHHHHH
Q 003452 393 EKERFQQIIQGMASSSLRCIAFAHKQVPEEE-HRNE------------KDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVE 459 (819)
Q Consensus 393 ~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~-~~~~------------~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~ 459 (819)
...++.+.++.++.+|+.++.++-+..++-. ...+ .+-......+..-++++.=-=..+++..+.++
T Consensus 96 ~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~l~~~~~~kv~vvsQTT~~~~~~~~i~~ 175 (281)
T PF02401_consen 96 FVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEKLPISDPKKVAVVSQTTQSVEKFEEIVE 175 (281)
T ss_dssp HHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHHGGGSSTTCEEEEE-TTS-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcccCCCCCCeEEEEEeecccHHHHHHHHH
Confidence 3556778899999999999999877664311 0000 00011112223345555555555666777777
Q ss_pred HHHhcCCcEEE--------EcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhh
Q 003452 460 DCQYAGVNIKM--------ITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531 (819)
Q Consensus 460 ~l~~aGI~v~m--------lTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 531 (819)
.|++..-.+.. .|-+....++.+|+++.+. -|.+.-....
T Consensus 176 ~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m--------------------------------iVIGg~~SsN 223 (281)
T PF02401_consen 176 ALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM--------------------------------IVIGGKNSSN 223 (281)
T ss_dssp HHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE--------------------------------EEES-TT-HH
T ss_pred HHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE--------------------------------EEecCCCCcc
Confidence 77766655542 2333344444444433221 1445445556
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCC--HHHhhhC-CcceeeCCCChH
Q 003452 532 KLLMVQCLKQKGHVVAVTRDGTND--APALKET-DIGLSMGIQGTE 574 (819)
Q Consensus 532 K~~iV~~L~~~g~~Va~~GDG~ND--~~aL~~A-dvGIamg~~gt~ 574 (819)
-.++.+..++.|..+-.+.+ ..| ...|+.+ .|||.-| .+|.
T Consensus 224 T~kL~eia~~~~~~t~~Ie~-~~el~~~~l~~~~~VGItaG-ASTP 267 (281)
T PF02401_consen 224 TRKLAEIAKEHGKPTYHIET-ADELDPEWLKGVKKVGITAG-ASTP 267 (281)
T ss_dssp HHHHHHHHHHCTTCEEEESS-GGG--HHHHTT-SEEEEEE--TTS-
T ss_pred HHHHHHHHHHhCCCEEEeCC-ccccCHhHhCCCCEEEEEcc-CCCC
Confidence 66788888888877777754 344 4567777 8899988 4443
No 219
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=38.36 E-value=1e+02 Score=29.12 Aligned_cols=83 Identities=16% Similarity=0.132 Sum_probs=56.5
Q ss_pred HHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cE-EEEcCCCHHHH
Q 003452 402 QGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NI-KMITGDNVFTA 479 (819)
Q Consensus 402 ~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v-~mlTGD~~~ta 479 (819)
.-+...|++|+-.....-+++ .-+...+.+-..+|+-++...--+.+++.++.|+++|. ++ +++-|-.+..-
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e~------~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~ 97 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPEE------IARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQD 97 (132)
T ss_pred HHHHhCCcEEEECCCCCCHHH------HHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHh
Confidence 345678998887764432221 11233466778899999998899999999999999987 44 44444444444
Q ss_pred HHHHHHcCCCC
Q 003452 480 KAIATECGILK 490 (819)
Q Consensus 480 ~~iA~~~GI~~ 490 (819)
..--+++|+..
T Consensus 98 ~~~l~~~Gvd~ 108 (132)
T TIGR00640 98 FDELKEMGVAE 108 (132)
T ss_pred HHHHHHCCCCE
Confidence 55577888865
No 220
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.29 E-value=2.5e+02 Score=30.56 Aligned_cols=62 Identities=13% Similarity=0.130 Sum_probs=35.2
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhh------CCcceeeCCCC-hHHHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKE------TDIGLSMGIQG-TEVAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~------AdvGIamg~~g-t~~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|.++|-+.. =+.+|.. |.|-++-..+. ....-..||+++.
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIs 210 (293)
T PRK14185 136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIA 210 (293)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEE
Confidence 556777766666665542 3899999998754 2334543 34444433111 1122356888876
No 221
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.85 E-value=1.2e+02 Score=32.69 Aligned_cols=62 Identities=10% Similarity=0.125 Sum_probs=37.8
Q ss_pred eeccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhh------CCcceeeCCCChH--HHHhhcCEEEe
Q 003452 523 VMARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKE------TDIGLSMGIQGTE--VAKESSDIVIL 585 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~------AdvGIamg~~gt~--~ak~aaDivl~ 585 (819)
-|.-|||.-=.++++...- .|+.|.++|-+.. =+-+|.. |.|-++.. ...+ ..-..||+++.
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~ 210 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFV 210 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 3566777766666655542 3899999999765 2334544 55555544 2222 34567898876
No 222
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.64 E-value=2.6e+02 Score=30.28 Aligned_cols=62 Identities=16% Similarity=0.225 Sum_probs=36.3
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhh--CCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKE--TDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~--AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
+.-|||.-=.++++...- .|+.|+++|-+.. =+-+|.. .+..+.+..+.|. ..-..||+++.
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~ 209 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVA 209 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEE
Confidence 456777666666665542 3899999998765 2334543 4444444433332 23456888876
No 223
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=37.40 E-value=1.3e+02 Score=33.01 Aligned_cols=49 Identities=14% Similarity=0.114 Sum_probs=38.6
Q ss_pred EEEEeeCCCCccHHHHHHHHHhc----CCcEEEEcCCC---HHH-HHHHHHHcCCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYA----GVNIKMITGDN---VFT-AKAIATECGILK 490 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~a----GI~v~mlTGD~---~~t-a~~iA~~~GI~~ 490 (819)
|++.-.+++-|++.++++.|++. |+++..+|-.. ..+ +..+.+++|+.-
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 56666788899999999999999 99999998654 333 555667888754
No 224
>PF15584 Imm44: Immunity protein 44
Probab=36.99 E-value=16 Score=31.95 Aligned_cols=19 Identities=21% Similarity=0.585 Sum_probs=15.7
Q ss_pred cCCEEEEecCCeeccceEE
Q 003452 238 VGDVICLKIGDQVPANGLF 256 (819)
Q Consensus 238 vGDiV~l~~Gd~VPaDg~l 256 (819)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4556788999999999984
No 225
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=36.72 E-value=1.5e+02 Score=32.93 Aligned_cols=62 Identities=19% Similarity=0.109 Sum_probs=35.9
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCCh---HHHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGT---EVAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt---~~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|.++|-+.. =+.+|...|.-+.+..+-| +..-..|||++.
T Consensus 193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIs 263 (345)
T PLN02897 193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIA 263 (345)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEE
Confidence 455666655555554432 2899999998754 2445555555544443333 223456888876
No 226
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.98 E-value=3.1e+02 Score=29.66 Aligned_cols=63 Identities=19% Similarity=0.234 Sum_probs=35.5
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEeC
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVILD 586 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~d 586 (819)
|.-|||.-=.++++...- .|+.|+++|.|.. =+-+|...+--+.+..+-|. ..-..||+++.-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVG 207 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEe
Confidence 455667655555554432 3889999999843 23345444444433323332 234678988763
No 227
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.90 E-value=2e+02 Score=31.12 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=35.1
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|..|+++|-|.. =+.+|...+.-+.+..+.|. ..-..||+++.
T Consensus 143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~ 213 (287)
T PRK14176 143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVV 213 (287)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEE
Confidence 556777766666665532 3888999988763 23344444444444322332 22356888764
No 228
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.68 E-value=1.1e+02 Score=33.01 Aligned_cols=30 Identities=10% Similarity=0.226 Sum_probs=20.7
Q ss_pred eccCCHhhHHHHHHHHH--hCCCEEEEEcCCC
Q 003452 524 MARSSPFDKLLMVQCLK--QKGHVVAVTRDGT 553 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~--~~g~~Va~~GDG~ 553 (819)
|.-|||.-=.++++... -.|..|+++|-|.
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~ 168 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSH 168 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCc
Confidence 45667766666665553 2389999999976
No 229
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=35.14 E-value=2.3e+02 Score=31.87 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=41.3
Q ss_pred eeccCCHh-hHHHHHHHHHhCCCEEEEEc-CCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHH
Q 003452 523 VMARSSPF-DKLLMVQCLKQKGHVVAVTR-DGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGR 600 (819)
Q Consensus 523 v~ar~sP~-~K~~iV~~L~~~g~~Va~~G-DG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR 600 (819)
+....+.+ +=.++.+..++.|+.|.+-+ |..|.+--|..-=. .+|.. ..|+ ++|..-..+..-++.+-
T Consensus 219 LL~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~Ln~kL~--~~Gv~-------~eDI-VlDP~t~alG~Gieya~ 288 (389)
T TIGR00381 219 LLASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTLNRYLL--KRGLM-------PRDI-VMDPTTCALGYGIEFSI 288 (389)
T ss_pred EEEecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHHHHHHH--HcCCC-------HHHE-EEcCCCccccCCHHHHH
Confidence 45555666 44456667788888776665 77766554432200 12211 1254 45556555555566555
Q ss_pred HHHHHHHH
Q 003452 601 CVHTNIQK 608 (819)
Q Consensus 601 ~~~~ni~k 608 (819)
..+.+||.
T Consensus 289 s~~erIRr 296 (389)
T TIGR00381 289 TNMERIRL 296 (389)
T ss_pred HHHHHHHH
Confidence 66666664
No 230
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=34.86 E-value=4.2e+02 Score=28.27 Aligned_cols=29 Identities=7% Similarity=0.037 Sum_probs=18.5
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAP 557 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~ 557 (819)
|++-.++++.+++.-..-.++|=|+|+..
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e 215 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSE 215 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHH
Confidence 44556677777776444455688988543
No 231
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=34.23 E-value=1.3e+02 Score=33.46 Aligned_cols=152 Identities=21% Similarity=0.257 Sum_probs=81.5
Q ss_pred HHHHHHHHHhhhCCceeeeeecccCCccccc-chhhhhhhcccCcEEEEEEEeeCCCCccH---HHHHHHHHhcCCc--E
Q 003452 395 ERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQKKLIEDNLTLLGLVGIKDPCRPGV---KKAVEDCQYAGVN--I 468 (819)
Q Consensus 395 ~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~v~i~D~lr~~v---~~aI~~l~~aGI~--v 468 (819)
+...+.++-+.+.|++-+.++.|.-+....- ....-.+..... -.+|+.--- +..+++ .-.+-.|-..||- +
T Consensus 160 esA~~~~~~le~~~f~~iviSlKsSdv~~~i~ayr~la~~~dyP-LHLGvTEAG-~~~~g~IkSsigiG~LL~~GIGDTI 237 (359)
T PF04551_consen 160 ESALEHVRILEELGFDDIVISLKSSDVPETIEAYRLLAERMDYP-LHLGVTEAG-TGEDGTIKSSIGIGALLLDGIGDTI 237 (359)
T ss_dssp HHHHHHHHHHHHCT-GGEEEEEEBSSHHHHHHHHHHHHHH--S--EEEEBSSEE-SCHHHHHHHHHHHHHHHHTT--SEE
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEeCChHHHHHHHHHHHHhcCCC-eEEeecCCC-CcccchhHHHHHHHHHHHcCCCCEE
Confidence 3444556667778888888887765432100 000000111122 233443222 333343 2346677888884 4
Q ss_pred EE-EcCCC---HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhC--
Q 003452 469 KM-ITGDN---VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK-- 542 (819)
Q Consensus 469 ~m-lTGD~---~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~-- 542 (819)
++ +|+|+ ...|..|-+.+|+-... ..++.-+ =|+|. --|-..+++.++++
T Consensus 238 RVSLt~~p~~EV~va~~IL~al~lR~~g-----~~~ISCP------------------tCGRt-~~Dl~~~~~~ie~~l~ 293 (359)
T PF04551_consen 238 RVSLTGDPVEEVKVAFEILQALGLRKRG-----PEIISCP------------------TCGRT-EFDLQELVAEIEERLK 293 (359)
T ss_dssp EE-ECSSCCCHHHHHHHHHHHTTSS-SS------EEEE----------------------TT---SHHHHHHHHHHHHCC
T ss_pred EEECCCCchHHHHHHHHHHHHhCcCcCC-----ceeeeCC------------------CCCCc-cchHHHHHHHHHHHHh
Confidence 33 68887 45778888889987631 1222211 24444 44556666666553
Q ss_pred ----CCEEEEEcCCCCCHHHhhhCCcceeeCCCC
Q 003452 543 ----GHVVAVTRDGTNDAPALKETDIGLSMGIQG 572 (819)
Q Consensus 543 ----g~~Va~~GDG~ND~~aL~~AdvGIamg~~g 572 (819)
+-.||+.|==+|-..-.+.||+|++.|+.+
T Consensus 294 ~l~~~lkIAVMGCiVNGPGEa~~AD~GiaGgg~g 327 (359)
T PF04551_consen 294 HLKKGLKIAVMGCIVNGPGEAKDADIGIAGGGKG 327 (359)
T ss_dssp CHHCG-EEEEESSTCCCHHHCTTSSEEEE-E-TT
T ss_pred cCCCCceEEEEeeeecCCchhhhCceeeecCCCC
Confidence 678999999999999999999999955333
No 232
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=33.70 E-value=64 Score=31.48 Aligned_cols=43 Identities=16% Similarity=0.047 Sum_probs=38.1
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~ 490 (819)
.=.+||++.+.+++|++. +++.++|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345899999999999955 9999999999999999999998653
No 233
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=33.45 E-value=1.3e+02 Score=32.20 Aligned_cols=84 Identities=10% Similarity=0.177 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhc-ccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCc-EEEE
Q 003452 394 KERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLI-EDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVN-IKMI 471 (819)
Q Consensus 394 ~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~-e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~-v~ml 471 (819)
.+++.+.++.+...+-.-+.+.+..........-....... +.+...+--+.-.|.-|.+..+.+..++++||+ +..+
T Consensus 14 ~~~l~~~~~~l~~~~pd~isvT~~~~~~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l 93 (272)
T TIGR00676 14 EENLWETVDRLSPLDPDFVSVTYGAGGSTRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREYRELGIRHILAL 93 (272)
T ss_pred HHHHHHHHHHHhcCCCCEEEeccCCCCCcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 35566666666655544555554333110000000001112 347788888888998888999999999999998 5669
Q ss_pred cCCCHH
Q 003452 472 TGDNVF 477 (819)
Q Consensus 472 TGD~~~ 477 (819)
|||...
T Consensus 94 ~GD~~~ 99 (272)
T TIGR00676 94 RGDPPK 99 (272)
T ss_pred CCCCCC
Confidence 999974
No 234
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=32.13 E-value=4.3e+02 Score=31.38 Aligned_cols=102 Identities=17% Similarity=0.072 Sum_probs=65.6
Q ss_pred cHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhh
Q 003452 453 GVKKAVEDCQYAGVNIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~v~mlTGD~-~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 531 (819)
|+-.++..+++.+-++.+++=.+ ...+..++.-+|+.- ..+.-.++++
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-------------------------------~~~~~~~~~e 143 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-------------------------------EQRSYVTEED 143 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-------------------------------EEEEecCHHH
Confidence 46677777787777888877665 344555666666543 2677788999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHH
Q 003452 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHT 604 (819)
Q Consensus 532 K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ 604 (819)
=...|+.++++|..| ++||++- ++.|+++-=--+++.+-.+|..++..+.....
T Consensus 144 ~~~~v~~lk~~G~~~-vvG~~~~------------------~~~A~~~g~~g~~~~s~e~i~~a~~~A~~~~~ 197 (538)
T PRK15424 144 ARGQINELKANGIEA-VVGAGLI------------------TDLAEEAGMTGIFIYSAATVRQAFEDALDMTR 197 (538)
T ss_pred HHHHHHHHHHCCCCE-EEcCchH------------------HHHHHHhCCceEEecCHHHHHHHHHHHHHHHH
Confidence 999999999999654 5588743 23333332212222244777777777766544
No 235
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=31.19 E-value=1.1e+02 Score=25.48 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=24.4
Q ss_pred cceEEEeCCEEEEEec---CccccCCEEEEecCCe
Q 003452 218 IQIDVIRNGRRQQISI---FEIVVGDVICLKIGDQ 249 (819)
Q Consensus 218 ~~~~V~RdG~~~~i~~---~~LvvGDiV~l~~Gd~ 249 (819)
..+.|-.+|..++|+. .++.|||-|.+..|--
T Consensus 17 ~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 17 GMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 4677888999999976 4688999999999943
No 236
>COG3329 Predicted permease [General function prediction only]
Probab=31.11 E-value=2.2e+02 Score=30.87 Aligned_cols=49 Identities=16% Similarity=0.388 Sum_probs=31.6
Q ss_pred HHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 003452 122 DIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFG 170 (819)
Q Consensus 122 ~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g 170 (819)
|....|+.|-+-.-.+...-..|+.+.|.|.+|-+.+++...++.++.|
T Consensus 186 d~~ssr~~~~~~~~~ed~~v~~~ell~Esflnpal~lllggl~iGlitG 234 (372)
T COG3329 186 DLASSRQEYLSPQWGEDNRVKIWELLQESFLNPALVLLLGGLAIGLITG 234 (372)
T ss_pred hhhhhhhhhcccccCcccchhhHHHHHHHHcCchHHHHHHHHHHhheec
Confidence 3444334333322233334567899999999999988888777776665
No 237
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.61 E-value=4e+02 Score=28.95 Aligned_cols=63 Identities=14% Similarity=0.122 Sum_probs=35.0
Q ss_pred eeccCCHhhHHHHHHHHH--hCCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 523 VMARSSPFDKLLMVQCLK--QKGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~--~~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
-|.-|||.-=.++++... -.|+.|+++|-+.. =+-+|...|.-+.+..+-|. ..-..||+++.
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVs 209 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVA 209 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 355667766555555543 23888999988754 23345444444444323332 22356787765
No 238
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=30.53 E-value=84 Score=26.17 Aligned_cols=57 Identities=19% Similarity=0.157 Sum_probs=35.0
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-CCCHHHhhhCCcceee---CCCChHHH---HhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDG-TNDAPALKETDIGLSM---GIQGTEVA---KESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG-~ND~~aL~~AdvGIam---g~~gt~~a---k~aaDivl~ 585 (819)
|.-=....+.+.-....+.|+||. ..|..+=+++++--.. |....+.. ...+|+|+.
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 333334444444334679999999 9999999999874332 22122222 257888875
No 239
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=30.34 E-value=1.1e+02 Score=26.10 Aligned_cols=47 Identities=13% Similarity=0.132 Sum_probs=37.9
Q ss_pred EEEeeCCCCccHHHHHHHHHhcCCcEEE-EcCCCHHHHHHHHHHcCCC
Q 003452 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKM-ITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 443 ~v~i~D~lr~~v~~aI~~l~~aGI~v~m-lTGD~~~ta~~iA~~~GI~ 489 (819)
++.+.+..++.+.+..+.|+++|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 4445566788888999999999999988 5777777778888888876
No 240
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=30.25 E-value=1.1e+02 Score=33.01 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=34.1
Q ss_pred ccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCc-EEEEcCCCHHH
Q 003452 435 EDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVN-IKMITGDNVFT 478 (819)
Q Consensus 435 e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~-v~mlTGD~~~t 478 (819)
+.++..+--+.-.|.-|.+....+..++++||+ |..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 457888999999999899999999999999997 88899998643
No 241
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.82 E-value=3.6e+02 Score=29.24 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=35.2
Q ss_pred eeccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 523 VMARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
-|.-|||.-=.++++..+- .|+.|+++|-+.. =+.+|...|.-+.+..+-|. ..-..||+++.
T Consensus 137 ~~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~ 208 (288)
T PRK14171 137 GFIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVA 208 (288)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 3556777665555554432 2788899988754 23345445544444433332 22356888876
No 242
>PLN02591 tryptophan synthase
Probab=29.65 E-value=2.7e+02 Score=29.56 Aligned_cols=33 Identities=15% Similarity=0.011 Sum_probs=22.6
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCC---CHHHhhh
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTN---DAPALKE 561 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~N---D~~aL~~ 561 (819)
|++-...++.+|+....-.++|=|++ |+..+.+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 55556778888876566667799998 4554444
No 243
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.52 E-value=2.1e+02 Score=30.98 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=34.8
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCCh-HH--HHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGT-EV--AKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt-~~--ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|..|+++|-+.. =+-+|...+.-+.+..+-| +. --..||+++.
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIs 207 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIV 207 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEE
Confidence 456677666666665432 2889999998755 2334544444444332223 22 2356888776
No 244
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=29.16 E-value=2.1e+02 Score=27.30 Aligned_cols=82 Identities=16% Similarity=0.200 Sum_probs=54.9
Q ss_pred HHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cE-EEEcCCC----
Q 003452 402 QGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NI-KMITGDN---- 475 (819)
Q Consensus 402 ~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v-~mlTGD~---- 475 (819)
..+...|++|+-++...-.+ +. .....+.+-.++|+-.+.-.-.+.+++.++.|++.|. ++ +++-|--
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e-~i-----~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~ 98 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQE-EF-----IDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGK 98 (137)
T ss_pred HHHHHCCCEEEECCCCCCHH-HH-----HHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCc
Confidence 34567899999887543222 11 1223456677888888888899999999999999976 34 4555532
Q ss_pred --HHHHHHHHHHcCCC
Q 003452 476 --VFTAKAIATECGIL 489 (819)
Q Consensus 476 --~~ta~~iA~~~GI~ 489 (819)
......-++++|+.
T Consensus 99 ~~~~~~~~~l~~~G~~ 114 (137)
T PRK02261 99 HDFEEVEKKFKEMGFD 114 (137)
T ss_pred cChHHHHHHHHHcCCC
Confidence 34445667788864
No 245
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=28.87 E-value=2e+02 Score=32.10 Aligned_cols=62 Identities=19% Similarity=0.212 Sum_probs=33.6
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|.++|-+.. =+.+|...|--+.+..+.|. ..-..|||++.
T Consensus 210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIs 280 (364)
T PLN02616 210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIIS 280 (364)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEE
Confidence 556777664444444322 2889999998754 23345444444443323332 23356787776
No 246
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.81 E-value=4.3e+02 Score=28.79 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=33.9
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhh------CCcceeeCCCC-hHHHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKE------TDIGLSMGIQG-TEVAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~------AdvGIamg~~g-t~~ak~aaDivl~ 585 (819)
|.-|||.-=.++++...- .|+.|+++|-+.. =+-+|.. |-|-++-..+. ....-..||+++.
T Consensus 140 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVs 214 (297)
T PRK14168 140 FLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIV 214 (297)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEE
Confidence 455666655555554432 2899999998754 2334433 44444433111 1223467888886
No 247
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=28.37 E-value=2.2e+02 Score=29.94 Aligned_cols=82 Identities=13% Similarity=0.094 Sum_probs=51.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHH----HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFT----AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t----a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.+=||+.+.++...+.|.+|..+|-+..+. ...=-++.|+...... .. ++
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~---~~-----------------------ll 175 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES---HL-----------------------LL 175 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc---ce-----------------------EE
Confidence 455899999999999999999999887655 2333455666542110 00 11
Q ss_pred --ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHh
Q 003452 525 --ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559 (819)
Q Consensus 525 --ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL 559 (819)
-..+-+...+.| ++--.+|+.+||..+|-...
T Consensus 176 kk~~k~Ke~R~~~v---~k~~~iVm~vGDNl~DF~d~ 209 (274)
T COG2503 176 KKDKKSKEVRRQAV---EKDYKIVMLVGDNLDDFGDN 209 (274)
T ss_pred eeCCCcHHHHHHHH---hhccceeeEecCchhhhcch
Confidence 122333333333 33457889999999986543
No 248
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=28.24 E-value=5.7e+02 Score=27.88 Aligned_cols=174 Identities=15% Similarity=0.179 Sum_probs=91.7
Q ss_pred ceEEEecchHHHHHHhhh----hcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccc-ccchh------
Q 003452 360 TSHVHWKGAAEMILAMCS----SYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEE-HRNEK------ 428 (819)
Q Consensus 360 ~~~~~~KGa~e~il~~c~----~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~-~~~~~------ 428 (819)
.+.+-.-|.+..+.+... .+.|. ..|+ ..++.+.++.++.+|+.++.++.+..++-. ...+.
T Consensus 68 ~ViirAHGv~~~~~~~~~~~g~~viDa---TCP~----V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~v 140 (298)
T PRK01045 68 IVIFSAHGVSPAVREEAKERGLTVIDA---TCPL----VTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYL 140 (298)
T ss_pred EEEEeCCCCCHHHHHHHHHCCCeEEeC---CCcc----chHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEE
Confidence 445555677766555443 22232 1233 345677888999999999999877765421 00000
Q ss_pred -hhhh---hcc-cCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEE--------EEcCCCHHHHHHHHHHcCCCCCCCCC
Q 003452 429 -DQKK---LIE-DNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK--------MITGDNVFTAKAIATECGILKPGQDT 495 (819)
Q Consensus 429 -~~~~---~~e-~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~--------mlTGD~~~ta~~iA~~~GI~~~~~~~ 495 (819)
.+.+ .+. .+..-++++.=-=..+++..+.++.+++..-.+. ..|-+....++.+|+++...
T Consensus 141 v~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m------ 214 (298)
T PRK01045 141 VESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV------ 214 (298)
T ss_pred EcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE------
Confidence 0000 010 1123355555444555666666676666543332 34555666666666654432
Q ss_pred CccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhh-hCCcceeeCCCCh
Q 003452 496 STGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALK-ETDIGLSMGIQGT 573 (819)
Q Consensus 496 ~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~-~AdvGIamg~~gt 573 (819)
+ |.+......-.++.+.-++.|..+-.+.+-. -|...|+ ...|||.-| .+|
T Consensus 215 ---i-----------------------VVGg~~SsNT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG-AST 267 (298)
T PRK01045 215 ---I-----------------------VVGSKNSSNSNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASA 267 (298)
T ss_pred ---E-----------------------EECCCCCccHHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec-CCC
Confidence 1 3333333344456666666676666664422 2444555 346899888 444
No 249
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=27.38 E-value=51 Score=34.45 Aligned_cols=95 Identities=7% Similarity=-0.107 Sum_probs=49.9
Q ss_pred CccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHh
Q 003452 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPF 530 (819)
Q Consensus 451 r~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 530 (819)
-++..++++.|++.|++. ++|......+.......|.- .-+ ..+...-.+...+..-+|+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g--------------~~~-----~~i~~~g~~~~~~gKP~~~ 199 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG--------------YYA-----ELIKQLGGKVIYSGKPYPA 199 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc--------------HHH-----HHHHHhCCcEecCCCCCHH
Confidence 478889999998899997 77775544332221111110 000 0000000011123333443
Q ss_pred hHHHHHHHHHhC-CCEEEEEcCC-CCCHHHhhhCCcc
Q 003452 531 DKLLMVQCLKQK-GHVVAVTRDG-TNDAPALKETDIG 565 (819)
Q Consensus 531 ~K~~iV~~L~~~-g~~Va~~GDG-~ND~~aL~~AdvG 565 (819)
-=....+.+... .+.+.|+||. .+|..+=+.|++-
T Consensus 200 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 200 IFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 323344444322 3469999999 5999888887764
No 250
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=26.53 E-value=8.4e+02 Score=26.33 Aligned_cols=171 Identities=17% Similarity=0.173 Sum_probs=94.7
Q ss_pred ceEEEecchHHHHHHhhhh----cccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccc-cchh------
Q 003452 360 TSHVHWKGAAEMILAMCSS----YYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEH-RNEK------ 428 (819)
Q Consensus 360 ~~~~~~KGa~e~il~~c~~----~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~-~~~~------ 428 (819)
.+.+-.-|.+..+.+.... +.|. ..|+ ..++...++.++.+|+.++.++.+..++-.- ..+.
T Consensus 68 ~ViirAHGv~~~~~~~~~~~gl~viDa---TCP~----V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~v 140 (280)
T TIGR00216 68 TVIIRAHGVPPEVREELEKKGLEVIDA---TCPL----VTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIV 140 (280)
T ss_pred EEEEeCCCCCHHHHHHHHHCCCeEEeC---CCcc----cHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEE
Confidence 3444456776655544432 2221 1233 3466778889999999999999877764210 0000
Q ss_pred -hhhhhcc--cCcEEEEEEEeeCCCCccHHHHHHHHHhcC--C------cEEEEcCCCHHHHHHHHHHcCCCCCCCCCCc
Q 003452 429 -DQKKLIE--DNLTLLGLVGIKDPCRPGVKKAVEDCQYAG--V------NIKMITGDNVFTAKAIATECGILKPGQDTST 497 (819)
Q Consensus 429 -~~~~~~e--~~l~~lG~v~i~D~lr~~v~~aI~~l~~aG--I------~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~ 497 (819)
.+.+..+ ....-++++.=-=..+++..+.++.|++.. . .+.-.|-+....++.+|+++.+.-
T Consensus 141 v~~~~d~~~l~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi------- 213 (280)
T TIGR00216 141 VETLEDLENFKVEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI------- 213 (280)
T ss_pred ECCHHHHHhCCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE-------
Confidence 0000000 011225555555555666777777777655 2 245556667777777777654321
Q ss_pred cceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhC-CcceeeC
Q 003452 498 GAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKET-DIGLSMG 569 (819)
Q Consensus 498 ~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~A-dvGIamg 569 (819)
|.+......-.++.+.-++.|..+-.+.+-. -|...|+.+ .|||.-|
T Consensus 214 -------------------------VVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 214 -------------------------VIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred -------------------------EECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 3333333344466677777776666664432 255667654 4688877
No 251
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=26.34 E-value=1.9e+02 Score=32.68 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=51.9
Q ss_pred cHHHHHHHHHhcCCc--EEEEcCCCHHHHHHH-HHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCH
Q 003452 453 GVKKAVEDCQYAGVN--IKMITGDNVFTAKAI-ATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~--v~mlTGD~~~ta~~i-A~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 529 (819)
|+..+++++-+.+-+ |+-.|+-|..-|.+. |+++|+... .|+-..+|
T Consensus 100 Ga~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaT------------------------------IVmP~~tp 149 (457)
T KOG1250|consen 100 GAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPAT------------------------------IVMPVATP 149 (457)
T ss_pred hHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceE------------------------------EEecCCCh
Confidence 778888888776643 777788887777765 788999752 16777888
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCH
Q 003452 530 FDKLLMVQCLKQKGHVVAVTRDGTNDA 556 (819)
Q Consensus 530 ~~K~~iV~~L~~~g~~Va~~GDG~ND~ 556 (819)
..| ++.++..|..|...|+..--+
T Consensus 150 ~~k---iq~~~nlGA~Vil~G~~~deA 173 (457)
T KOG1250|consen 150 LMK---IQRCRNLGATVILSGEDWDEA 173 (457)
T ss_pred HHH---HHHHhccCCEEEEecccHHHH
Confidence 877 556667788888888765433
No 252
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.10 E-value=1e+02 Score=28.31 Aligned_cols=37 Identities=27% Similarity=0.289 Sum_probs=28.7
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGI 488 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI 488 (819)
--+++.++++.+++.|++++.+|++.. -...|.+-|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 456789999999999999999998874 3335655554
No 253
>PTZ00445 p36-lilke protein; Provisional
Probab=26.09 E-value=98 Score=31.91 Aligned_cols=75 Identities=12% Similarity=0.142 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcc-cCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEc
Q 003452 394 KERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIE-DNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMIT 472 (819)
Q Consensus 394 ~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e-~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlT 472 (819)
.+.....++.+...|.|++++-+...--.-.. ..+.... .+.. +--.++|+.+.-+++|+++||+|.++|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~Hs---gG~~~~~~~~~~------~~~~~tpefk~~~~~l~~~~I~v~VVT 98 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTMITKHS---GGYIDPDNDDIR------VLTSVTPDFKILGKRLKNSNIKISVVT 98 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhhhhhhc---ccccCCCcchhh------hhccCCHHHHHHHHHHHHCCCeEEEEE
Confidence 34455667778899999998754321000000 0011111 1111 223579999999999999999999999
Q ss_pred CCCHH
Q 003452 473 GDNVF 477 (819)
Q Consensus 473 GD~~~ 477 (819)
=-...
T Consensus 99 fSd~~ 103 (219)
T PTZ00445 99 FSDKE 103 (219)
T ss_pred ccchh
Confidence 55443
No 254
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=25.87 E-value=5.7e+02 Score=27.62 Aligned_cols=62 Identities=16% Similarity=0.201 Sum_probs=36.8
Q ss_pred eccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCCh---HHHHhhcCEEEe
Q 003452 524 MARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGT---EVAKESSDIVIL 585 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt---~~ak~aaDivl~ 585 (819)
+--|||.-=..+++.+.- +|..+.++|-|.= =+.+|..++--+.+..+.| ..--..||+++.
T Consensus 135 ~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~ 205 (283)
T COG0190 135 FLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVV 205 (283)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEE
Confidence 446777776666666654 4888888887632 2445566666666554433 123345777655
No 255
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=25.57 E-value=1.1e+02 Score=31.80 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=32.1
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHH-cCCC
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMIT---GDNVFTAKAIATE-CGIL 489 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlT---GD~~~ta~~iA~~-~GI~ 489 (819)
.+.+=|++.++|+.++++|++++++| |.........-.+ .|+.
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 45566799999999999999999998 5555555444344 6764
No 256
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=25.18 E-value=1.2e+03 Score=30.12 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=29.9
Q ss_pred ccCCEEEEecCCeeccceEEEe---ccceeEecccccCC
Q 003452 237 VVGDVICLKIGDQVPANGLFLD---GHSLQVDESSMTGE 272 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~---g~~l~VDES~LTGE 272 (819)
.-|....+..-|.+|-|-++++ |..+-+|=-.+.|+
T Consensus 235 Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 235 RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 4588999999999999999997 66666777777774
No 257
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.02 E-value=1.4e+02 Score=27.15 Aligned_cols=82 Identities=22% Similarity=0.347 Sum_probs=55.5
Q ss_pred HHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cE-EEEcCCCHHHH
Q 003452 402 QGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NI-KMITGDNVFTA 479 (819)
Q Consensus 402 ~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v-~mlTGD~~~ta 479 (819)
.-+...|++|+-+... .+.++. .....+.+-.++|+-...++--+.+++.++.+|+.+- ++ +++-|-....-
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l-----~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~ 94 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEI-----VEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRD 94 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHH-----HHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChh
Confidence 3455789999766522 332221 1223456667888888878888999999999999987 54 66777655443
Q ss_pred HHHHHHcCCC
Q 003452 480 KAIATECGIL 489 (819)
Q Consensus 480 ~~iA~~~GI~ 489 (819)
...+++.|.+
T Consensus 95 ~~~~~~~G~D 104 (119)
T cd02067 95 FKFLKEIGVD 104 (119)
T ss_pred HHHHHHcCCe
Confidence 4678888875
No 258
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=24.73 E-value=1.7e+02 Score=32.60 Aligned_cols=59 Identities=22% Similarity=0.357 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCEEEEE--cCCC-----------------CCHHHhhhC--CcceeeCCCChHHH----Hh--hcCEEEe
Q 003452 533 LLMVQCLKQKGHVVAVT--RDGT-----------------NDAPALKET--DIGLSMGIQGTEVA----KE--SSDIVIL 585 (819)
Q Consensus 533 ~~iV~~L~~~g~~Va~~--GDG~-----------------ND~~aL~~A--dvGIamg~~gt~~a----k~--aaDivl~ 585 (819)
..+++.|+++|..++.+ |-|. .|-|.|-+. ++-+.++.+-.+.+ ++ .+|++++
T Consensus 76 ~~La~~l~~~G~~~~IlSRGYg~~~~~~~~v~~~~~~~~~GDEpllla~~~~~~V~V~~dR~~aa~~l~~~~~~~dviIl 155 (338)
T PRK01906 76 IALVDALRAAGFTPGVVSRGYGAKIKHPTAVTPASRASDAGDEPLLIARRTDAPVWVCPDRVAAAQALLAAHPGVDVIVS 155 (338)
T ss_pred HHHHHHHHHcCCceEEEecCCCCCCCCCeEEcCCCChhhhCcHHHHhhhcCCCeEEEeCcHHHHHHHHHHhCCCCCEEEE
Confidence 35667788888888877 4332 577766433 67777775443322 21 4899999
Q ss_pred CCChhH
Q 003452 586 DDNFAS 591 (819)
Q Consensus 586 dd~f~~ 591 (819)
||.|..
T Consensus 156 DDGfQH 161 (338)
T PRK01906 156 DDGLQH 161 (338)
T ss_pred CCCCcc
Confidence 999875
No 259
>PRK11507 ribosome-associated protein; Provisional
Probab=24.55 E-value=79 Score=26.54 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=22.0
Q ss_pred EEEeCCEEEEEecCccccCCEEEEec
Q 003452 221 DVIRNGRRQQISIFEIVVGDVICLKI 246 (819)
Q Consensus 221 ~V~RdG~~~~i~~~~LvvGDiV~l~~ 246 (819)
.|..||+...-.-..|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 56669999889999999999998843
No 260
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=24.28 E-value=2.8e+02 Score=29.07 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=32.4
Q ss_pred CccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 451 r~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
++..+++|++|+++||+|-++ =|+.......|+++|-.
T Consensus 109 ~~~l~~~i~~l~~~gI~VSLF-iDP~~~qi~~A~~~GAd 146 (237)
T TIGR00559 109 KDKLCELVKRFHAAGIEVSLF-IDADKDQISAAAEVGAD 146 (237)
T ss_pred HHHHHHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHhCcC
Confidence 356789999999999999998 57778888899999975
No 261
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=24.04 E-value=1.9e+02 Score=31.85 Aligned_cols=58 Identities=22% Similarity=0.339 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCEEEEE--cCCC------------------CCHHHhhhC--CcceeeCCCCh---HHHHh--hcCEEEeC
Q 003452 534 LMVQCLKQKGHVVAVT--RDGT------------------NDAPALKET--DIGLSMGIQGT---EVAKE--SSDIVILD 586 (819)
Q Consensus 534 ~iV~~L~~~g~~Va~~--GDG~------------------ND~~aL~~A--dvGIamg~~gt---~~ak~--aaDivl~d 586 (819)
.+++.|+++|..|+.+ |-|. .|-|+|-+. ++.+.++..-. ..+.+ .+|++++|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 4567788889889888 3321 377766444 67888874422 23332 58999999
Q ss_pred CChhH
Q 003452 587 DNFAS 591 (819)
Q Consensus 587 d~f~~ 591 (819)
|.|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 98865
No 262
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=23.20 E-value=1.3e+02 Score=28.85 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=34.1
Q ss_pred ccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEc
Q 003452 435 EDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMIT 472 (819)
Q Consensus 435 e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlT 472 (819)
-.+..-++++|+.|.+...+-.+-+.|+++|++|+-+-
T Consensus 13 L~~~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVN 50 (140)
T COG1832 13 LKSAKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVN 50 (140)
T ss_pred HHhCceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeC
Confidence 34567789999999999999999999999999999884
No 263
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.13 E-value=6.1e+02 Score=23.92 Aligned_cols=106 Identities=18% Similarity=0.140 Sum_probs=62.3
Q ss_pred EEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHH
Q 003452 439 TLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 439 ~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~-~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
.++|.++- |--..+..-+-..|+.+|++|+-..+|. +++..+-|.+-+-. ..++.+
T Consensus 5 v~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad--------ii~iSs-------------- 61 (132)
T TIGR00640 5 ILVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH--------VVGVSS-------------- 61 (132)
T ss_pred EEEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC--------EEEEcC--------------
Confidence 34555555 5555566666777899999999988874 44554555544321 111111
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhCCC--EEEEEcC--CCCCHHHhhhCCcceeeCCCChH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQKGH--VVAVTRD--GTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~g~--~Va~~GD--G~ND~~aL~~AdvGIamg~~gt~ 574 (819)
.-..+.+.=..+++.|+++|. +..++|- ...|...+++++|-=.++ .|++
T Consensus 62 ------l~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~-~gt~ 115 (132)
T TIGR00640 62 ------LAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAEIFG-PGTP 115 (132)
T ss_pred ------chhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCEEEC-CCCC
Confidence 011233445677888888753 4556663 334688899888865555 4443
No 264
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=22.95 E-value=3.7e+02 Score=25.39 Aligned_cols=82 Identities=17% Similarity=0.230 Sum_probs=54.2
Q ss_pred HhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cEEEEcCCCH-----
Q 003452 403 GMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NIKMITGDNV----- 476 (819)
Q Consensus 403 ~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v~mlTGD~~----- 476 (819)
.+...|++++-++...-+++ + -+...+.+-..+|+-++-=.--+..+++++.|+++|+ .+.++=|-+.
T Consensus 22 ~L~~~GfeVidLG~~v~~e~-~-----v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~ 95 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQEE-F-----IDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQ 95 (128)
T ss_pred HHHHCCCEEEECCCCCCHHH-H-----HHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChh
Confidence 44578999987775443221 1 1223456777888888888888899999999999998 5544444432
Q ss_pred --HHHHHHHHHcCCCC
Q 003452 477 --FTAKAIATECGILK 490 (819)
Q Consensus 477 --~ta~~iA~~~GI~~ 490 (819)
.....-.+++|+..
T Consensus 96 d~~~~~~~L~~~Gv~~ 111 (128)
T cd02072 96 DFEDVEKRFKEMGFDR 111 (128)
T ss_pred hhHHHHHHHHHcCCCE
Confidence 22345577788753
No 265
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated
Probab=22.84 E-value=1.1e+02 Score=37.42 Aligned_cols=26 Identities=31% Similarity=0.690 Sum_probs=20.2
Q ss_pred cCccccCCEEEE-ecCCeec-cceEEEe
Q 003452 233 IFEIVVGDVICL-KIGDQVP-ANGLFLD 258 (819)
Q Consensus 233 ~~~LvvGDiV~l-~~Gd~VP-aDg~ll~ 258 (819)
-.+|.+||.|.| ++||+|| .++++.+
T Consensus 365 ~~~i~iGD~V~V~raGdVIP~i~~vv~~ 392 (665)
T PRK07956 365 RKDIRIGDTVVVRRAGDVIPEVVGVVLE 392 (665)
T ss_pred HcCCCCCCEEEEEECCCccceeeeeecc
Confidence 367999999999 7899999 4555443
No 266
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=22.50 E-value=2.2e+02 Score=31.04 Aligned_cols=85 Identities=13% Similarity=0.095 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhhhCCceeeeeecccCCcccccch-hhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCc-EEE
Q 003452 393 EKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE-KDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVN-IKM 470 (819)
Q Consensus 393 ~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~-~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~-v~m 470 (819)
..+.+.+.++.+..-+-..+.+.|..-........ ....-.-+.++..+--+.-.|.-|.+..+.+..++++||+ +..
T Consensus 37 ~~~~l~~~~~~l~~~~p~fvsVT~~~~~~~~~r~~~~a~~i~~~~g~~~i~Hltcr~~n~~~l~~~L~~~~~~GI~niLa 116 (296)
T PRK09432 37 MEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKKRTGLEAAPHLTCIDATPDELRTIAKDYWNNGIRHIVA 116 (296)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCCcHHHHHHHHHHHHHHHhCCCeeeecccCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 33444455566655444444455544321110000 0011112446777888888888888999999999999997 888
Q ss_pred EcCCCHH
Q 003452 471 ITGDNVF 477 (819)
Q Consensus 471 lTGD~~~ 477 (819)
++||.+.
T Consensus 117 LrGD~p~ 123 (296)
T PRK09432 117 LRGDLPP 123 (296)
T ss_pred eCCCCCC
Confidence 9999653
No 267
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=22.43 E-value=1.8e+02 Score=32.18 Aligned_cols=60 Identities=25% Similarity=0.432 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCEEEEE--cCCC------------------CCHHHhhhCC--cceeeCCCChH---HHHh--hcCEEEe
Q 003452 533 LLMVQCLKQKGHVVAVT--RDGT------------------NDAPALKETD--IGLSMGIQGTE---VAKE--SSDIVIL 585 (819)
Q Consensus 533 ~~iV~~L~~~g~~Va~~--GDG~------------------ND~~aL~~Ad--vGIamg~~gt~---~ak~--aaDivl~ 585 (819)
..+++.|+++|..++++ |-|. .|-|+|-+-. +.+.+|..-.. .+.+ .+|++++
T Consensus 55 ~~L~~~L~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 134 (326)
T PF02606_consen 55 IWLARLLQARGYRPAILSRGYGRKSKGEPILVSDGSDAEEVGDEPLLLARKLPVPVIVGPDRVAAARAALKEFPADVIIL 134 (326)
T ss_pred HHHHHHHHhcCCceEEEcCCCCCCCCCCeEEEeCCCChhhhcCHHHHHHHhcCCcEEEeCcHHHHHHHHHHHCCCCEEEE
Confidence 45678888888888887 4442 2777764444 44777744222 2222 3899999
Q ss_pred CCChhHH
Q 003452 586 DDNFASV 592 (819)
Q Consensus 586 dd~f~~i 592 (819)
||.|..-
T Consensus 135 DDGfQh~ 141 (326)
T PF02606_consen 135 DDGFQHR 141 (326)
T ss_pred cCCcccc
Confidence 9998653
No 268
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=22.29 E-value=6.8e+02 Score=24.30 Aligned_cols=66 Identities=12% Similarity=0.206 Sum_probs=32.9
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHH--------hcccCCcceEEEeCCEEEEEecCccccCCEEEEe
Q 003452 176 LKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKF--------SKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLK 245 (819)
Q Consensus 176 ~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l--------~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~ 245 (819)
...-|-|-..|++.+++....--+++|++.+...+- +.......+ +-+..-|++..+.-|-+|.++
T Consensus 42 ~~tKyRDL~II~~L~ll~l~giq~~~y~~~~~~~~q~~~~~~fi~~vA~~~~V----~~~~v~VNst~l~dG~iVki~ 115 (149)
T PF11694_consen 42 LDTKYRDLSIIALLLLLLLIGIQYSDYQQNQNQHSQSSQMVHFIESVAKDLGV----SKEEVYVNSTALTDGMIVKIG 115 (149)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHHhCC----ChheEEEecccccCCeEEEEC
Confidence 334566765555555554444556677665442221 111111111 223456677777777666655
No 269
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=22.19 E-value=1.9e+02 Score=31.89 Aligned_cols=84 Identities=17% Similarity=0.286 Sum_probs=61.0
Q ss_pred EEEeeCCCCccHHHHHHHHH-hcCCcEEEEcCCC---HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHh
Q 003452 443 LVGIKDPCRPGVKKAVEDCQ-YAGVNIKMITGDN---VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 443 ~v~i~D~lr~~v~~aI~~l~-~aGI~v~mlTGD~---~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
+.+++|+-|-|...++.+.. ++|+.+.+- -|. .+.++.+++.+||+.- ..+-+|.
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~-ee~Ipv~~eVr~vce~lGiDPl------~~anEG~-------------- 277 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIE-EEKIPVREEVRGVCELLGLDPL------ELANEGK-------------- 277 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEe-eccccccHHHHHHHHHhCCCHH------HhhcCce--------------
Confidence 66799999999999998875 456666654 443 5778999999999762 2222332
Q ss_pred hhhceeccCCHhhHHHHHHHHHhCC-CEEEEEcC
Q 003452 519 DKICVMARSSPFDKLLMVQCLKQKG-HVVAVTRD 551 (819)
Q Consensus 519 ~~~~v~ar~sP~~K~~iV~~L~~~g-~~Va~~GD 551 (819)
+.+-+.|++-.++++.|++.| ...+.+|-
T Consensus 278 ----lv~~V~~~~a~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 278 ----LVIAVPPEHAEEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred ----EEEEECHHHHHHHHHHHHhcCCccceeEEE
Confidence 566778888888999999988 45555554
No 270
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=22.17 E-value=7.1e+02 Score=29.48 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=67.9
Q ss_pred cHHHHHHHHHhcCCcEEEEcCCCH-HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhh
Q 003452 453 GVKKAVEDCQYAGVNIKMITGDNV-FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~v~mlTGD~~-~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 531 (819)
|+-.+++.+++.+-++.+++=.+. ..+..++.-+++.- .++.-.++++
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i-------------------------------~~~~~~~~~e 133 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI-------------------------------VQRSYVTEED 133 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-------------------------------EEEEecCHHH
Confidence 466777777777777777766553 44566666666643 2677788999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh-cCEEEeCCChhHHHHHHHHHHHHHHHH
Q 003452 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES-SDIVILDDNFASVARVLRWGRCVHTNI 606 (819)
Q Consensus 532 K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a-aDivl~dd~f~~i~~~i~~gR~~~~ni 606 (819)
=...++.++++|..+ ++||++- ++.|++. -.-++..+. .+|..++..+...+.-.
T Consensus 134 ~~~~~~~l~~~G~~~-viG~~~~------------------~~~A~~~gl~~ili~s~-esi~~a~~~A~~~~~~~ 189 (526)
T TIGR02329 134 ARSCVNDLRARGIGA-VVGAGLI------------------TDLAEQAGLHGVFLYSA-DSVRQAFDDALDVARAT 189 (526)
T ss_pred HHHHHHHHHHCCCCE-EECChHH------------------HHHHHHcCCceEEEecH-HHHHHHHHHHHHHHHHH
Confidence 999999999999644 5588742 2222222 223444433 88888888887765543
No 271
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=22.11 E-value=2.1e+02 Score=31.38 Aligned_cols=58 Identities=24% Similarity=0.426 Sum_probs=36.0
Q ss_pred HHHHHHHhCCCEEEEE--cCCC------------------CCHHHhhhC--CcceeeCCCChHH---H-Hh-hcCEEEeC
Q 003452 534 LMVQCLKQKGHVVAVT--RDGT------------------NDAPALKET--DIGLSMGIQGTEV---A-KE-SSDIVILD 586 (819)
Q Consensus 534 ~iV~~L~~~g~~Va~~--GDG~------------------ND~~aL~~A--dvGIamg~~gt~~---a-k~-aaDivl~d 586 (819)
.+++.|+++|..++.+ |-|. .|-|.|-+- ++-+.++..-.+. + ++ .+|++++|
T Consensus 49 ~La~~l~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~a~~~~~~~~~~dviilD 128 (311)
T TIGR00682 49 WLAELLKDRGLRVGVLSRGYGSKTKKYTLVGSKKHTASEVGDEPVLLAKYLHATVVASKDRKDAILLILEQLDPDVIILD 128 (311)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCeeeeCCCCChHHcCcHHHHhhhhcCCcEEEeChHHHHHHHHHhcCCCCEEEEC
Confidence 4567788888777777 3221 266655332 5666776443332 2 22 48999999
Q ss_pred CChhH
Q 003452 587 DNFAS 591 (819)
Q Consensus 587 d~f~~ 591 (819)
|.|..
T Consensus 129 DGfQh 133 (311)
T TIGR00682 129 DGLQH 133 (311)
T ss_pred CCCcC
Confidence 99865
No 272
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=22.11 E-value=1.1e+02 Score=27.62 Aligned_cols=29 Identities=31% Similarity=0.559 Sum_probs=23.1
Q ss_pred EEEeCCEEEEEecCccccCCEEEEecCCee
Q 003452 221 DVIRNGRRQQISIFEIVVGDVICLKIGDQV 250 (819)
Q Consensus 221 ~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~V 250 (819)
+|.-||... -|+.++++||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 444477766 78999999999999988654
No 273
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.54 E-value=1e+03 Score=25.76 Aligned_cols=63 Identities=16% Similarity=0.207 Sum_probs=33.8
Q ss_pred eeccCCHhhHHHHHHHHHh--CCCEEEEEcCCCC----CHHHhhhCCcceeeCCCChH---HHHhhcCEEEe
Q 003452 523 VMARSSPFDKLLMVQCLKQ--KGHVVAVTRDGTN----DAPALKETDIGLSMGIQGTE---VAKESSDIVIL 585 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~--~g~~Va~~GDG~N----D~~aL~~AdvGIamg~~gt~---~ak~aaDivl~ 585 (819)
-|.-|||.-=.++++...- .|+.|+++|-+.. =+-+|...+.-+.+..+.|. ..-..||+++.
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIs 208 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVG 208 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4566777655555554432 2788888887654 23344444444444323332 23456777765
No 274
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.79 E-value=1.3e+02 Score=25.79 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=27.3
Q ss_pred EEEEeeCCC-CccHHHHHHHHHhcCCcEEEEcCCC
Q 003452 442 GLVGIKDPC-RPGVKKAVEDCQYAGVNIKMITGDN 475 (819)
Q Consensus 442 G~v~i~D~l-r~~v~~aI~~l~~aGI~v~mlTGD~ 475 (819)
..++++-+- ++...+.++.|+++|+++...|.+.
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~ 76 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDE 76 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCH
Confidence 456677776 7889999999999999998766543
No 275
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.68 E-value=1.7e+02 Score=24.37 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=35.1
Q ss_pred EEEeeCCCCccHHHHHHHHHhcCCcEEEE-cCCCHHHHHHHHHHcCCC
Q 003452 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKMI-TGDNVFTAKAIATECGIL 489 (819)
Q Consensus 443 ~v~i~D~lr~~v~~aI~~l~~aGI~v~ml-TGD~~~ta~~iA~~~GI~ 489 (819)
++.+.++.++.+.+..+.|+++|++|.+. .+.+.......|+..|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 34455667777888889999999998874 344777777788887764
No 276
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=20.60 E-value=5e+02 Score=27.52 Aligned_cols=42 Identities=19% Similarity=0.101 Sum_probs=25.1
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEE-EEcCCC-HHHHHHHHHHc
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIK-MITGDN-VFTAKAIATEC 486 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~-mlTGD~-~~ta~~iA~~~ 486 (819)
.+-|.+-++..+.++.|++.|++.. +++-.. .+....+++..
T Consensus 120 iipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 120 LVADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred EECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 3445555677777777777777733 555444 34555566554
No 277
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=20.57 E-value=1.5e+03 Score=27.23 Aligned_cols=20 Identities=20% Similarity=0.414 Sum_probs=9.2
Q ss_pred ccccc-cccch-HHHHHHHHHH
Q 003452 740 KNVFE-GIHKN-RLFLGIIGTT 759 (819)
Q Consensus 740 ~~~~~-~~~~n-~~~~~~i~~~ 759 (819)
.+++. .++++ +.|...++++
T Consensus 298 ~Pl~P~~Lf~~~r~~~~~lvi~ 319 (599)
T PF06609_consen 298 DPLFPHRLFKDRRGFAALLVIS 319 (599)
T ss_pred CCcCCHHHhccchHHHHHHHHH
Confidence 44443 45554 4454444343
Done!